HHsearch alignment for GI: 254780525 and conserved domain: PRK07521

>PRK07521 flgK flagellar hook-associated protein FlgK; Validated.
Probab=100.00  E-value=0  Score=331.32  Aligned_cols=193  Identities=18%  Similarity=0.086  Sum_probs=102.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEECCCH
Q ss_conf             94458899999999999986378877530277867142200246543047777631220588578863034111214830
Q gi|254780525|r    1 MGILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTSNSYVSGGLEISTKDMISEQGSLMHTASN   80 (421)
Q Consensus         1 MSl~~~l~~a~SGL~A~q~al~vts~NIANanT~GYsRq~~~~~~~~~~~~~~~~~G~GV~v~~i~r~~~~~~~~~t~~~   80 (421)
T Consensus         1 Msl~s~lnia~sgL~a~Q~al~vtg~NIANanT~GYsRQ~v~~~~~----------~~Gv~v~~I~R~~d~fl~~q~r~~   70 (482)
T PRK07521          1 MSLSSALNTAQSGLTATSRQTSVVSRNIANALTPGYSRRTASLVSG----------PYGGQVVGISRAQDEALLAQYLLA   70 (482)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC----------CCCEEEEEEEEEHHHHHHHHHHHH
T ss_conf             9767899999999999999999885635307998824137787744----------898578779981148999999999


Q ss_pred             H----------HHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2----------211036662010179882564201122212367201455620111110134555432344544444444
Q gi|254780525|r   81 T----------DLAIQGKGFFIVKGRDNVNCLTRAGDFHINNEGFLENVAGGVLLGYPLKNASAPLIVNSFQGLERINVK  150 (421)
Q Consensus        81 ~----------d~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (421)
T Consensus        71 ~s~~~~~~~~~~~l~~le~~~~e~~~~-~~l~~~l~~F~~a~q~ls~~P~~~~~r~~v~~~a~~L~~~~n~~~~~L~~~~  149 (482)
T PRK07521         71 TSAAAAQDTLASGLERLASAVGDTDYE-GSPSARLSDFQAALQTAASSPDNTTLAQAAVDAAQDLANSLNDASDAVQSAR  149 (482)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             877789999999999999983899888-7578999999999999861988789999999999999999999999999999


Q ss_pred             CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf             455454333211233102455444444444456776543222103675406887
Q gi|254780525|r  151 HAELSAMPTTTGFISNNLDKNATIITPDKTPKHNGRDAEYTHKSSFAAYDTLGS  204 (421)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  204 (421)
T Consensus       150 ~~~~~~i~~~V~~iN~l~~~Ia~LN~qI~~~~~~g~~~ndLlDqRD~ll~eLS~  203 (482)
T PRK07521        150 ADADAEIATSVDTLNTLLAQFEDANNAIVSGTATGRDASDLLDQRDALLKQISQ  203 (482)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999999995247899947889999999999985