HHsearch alignment for GI: 254780525 and conserved domain: PRK07739
>PRK07739 flgK flagellar hook-associated protein FlgK; Validated.
Probab=100.00 E-value=0 Score=329.55 Aligned_cols=75 Identities=23% Similarity=0.239 Sum_probs=65.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHCC-------CCCCCCCCCEEEEEEEEEECCCC
Q ss_conf 94458899999999999986378877530277867142200246543047-------77763122058857886303411
Q gi|254780525|r 1 MGILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPS-------TSNSYVSGGLEISTKDMISEQGS 73 (421)
Q Consensus 1 MSl~~~l~~a~SGL~A~q~al~vts~NIANanT~GYsRq~~~~~~~~~~~-------~~~~~~G~GV~v~~i~r~~~~~~ 73 (421)
T Consensus 2 ~s~f~~Lnia~SGL~a~Q~~l~vt~~NIANanT~GYsRq~v~~~~~~~~~~~g~~~~~~~gq~G~GV~v~~V~R~~d~~l 81 (500)
T PRK07739 2 PSTFMGLETARRGLFAQQAALYVTGHNIANANTPGYTRQRVNLAATPPYPTVSRNDPKGPGQMGTGVEAGSIERIRDQFL 81 (500)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHH
T ss_conf 84053599999999999999999977573279998052056764346755666556667775436768745888305899
Q ss_pred EE
Q ss_conf 12
Q gi|254780525|r 74 LM 75 (421)
Q Consensus 74 ~~ 75 (421)
T Consensus 82 ~~ 83 (500)
T PRK07739 82 DN 83 (500)
T ss_pred HH
T ss_conf 99