HHsearch alignment for GI: 254780525 and conserved domain: PRK08471
>PRK08471 flgK flagellar hook-associated protein FlgK; Validated.
Probab=100.00 E-value=0 Score=326.64 Aligned_cols=76 Identities=26% Similarity=0.346 Sum_probs=71.2
Q ss_pred CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEE
Q ss_conf 94-45889999999999998637887753027786714220024654304777763122058857886303411121
Q gi|254780525|r 1 MG-ILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTSNSYVSGGLEISTKDMISEQGSLMH 76 (421)
Q Consensus 1 MS-l~~~l~~a~SGL~A~q~al~vts~NIANanT~GYsRq~~~~~~~~~~~~~~~~~G~GV~v~~i~r~~~~~~~~~ 76 (421)
T Consensus 1 M~s~fs~Lnia~sGL~a~Q~aL~vtg~NIANanT~GYsRQ~v~~~~~~~~~~~~g~~G~GV~v~~I~R~~D~fl~~q 77 (612)
T PRK08471 1 MGGIFSSLNTGYTGLQAHQVQVSVTGNNISNASSEFYTRQRVVQTAQTALNTGPGNVGTGTQIETIVRIHDEFVYSR 77 (612)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHH
T ss_conf 97056589999999999999999986767407899815016774044661257886556779766987035799999