HHsearch alignment for GI: 254780525 and conserved domain: PRK12622
>PRK12622 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=98.51 E-value=1.4e-07 Score=65.85 Aligned_cols=47 Identities=40% Similarity=0.549 Sum_probs=43.1
Q ss_pred CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHH
Q ss_conf 9445-8899999999999986378877530277867142200246543
Q gi|254780525|r 1 MGIL-GSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLV 47 (421)
Q Consensus 1 MSl~-~~l~~a~SGL~A~q~al~vts~NIANanT~GYsRq~~~~~~~~ 47 (421)
T Consensus 1 ~~lF~~ti~ll~kaLd~~~~Rq~via~NIANadTPgYK~~dv~Fe~~L 48 (135)
T PRK12622 1 MNIFERSVDLSHRYLDVLSLRQSVIADNIANVDTPNFKRSKVTFESEL 48 (135)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
T ss_conf 952788999999998899999999985010278999752407699999