HHsearch alignment for GI: 254780525 and conserved domain: PRK12625

>PRK12625 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=98.40  E-value=3.8e-07  Score=63.20  Aligned_cols=48  Identities=27%  Similarity=0.376  Sum_probs=42.0

Q ss_pred             CC--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHH
Q ss_conf             94--4588999999999999863788775302778671422002465430
Q gi|254780525|r    1 MG--ILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVF   48 (421)
Q Consensus         1 MS--l~~~l~~a~SGL~A~q~al~vts~NIANanT~GYsRq~~~~~~~~~   48 (421)
T Consensus         1 m~~~fd~~~~~~~~aL~~~~~Rq~via~NIANadTPgYKa~dl~Fe~~L~   50 (132)
T PRK12625          1 MAINFDKALGVHQYTLGIRAQRAEVISSNIANADTPHYKARDVDFSAAMQ   50 (132)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf             96548888617899999999999999871430689998865388999999