HHsearch alignment for GI: 254780525 and conserved domain: PRK12626
>PRK12626 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=98.10 E-value=2.6e-06 Score=57.80 Aligned_cols=47 Identities=28% Similarity=0.422 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHC
Q ss_conf 45889999999999998637887753027786714220024654304
Q gi|254780525|r 3 ILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFP 49 (421)
Q Consensus 3 l~~~l~~a~SGL~A~q~al~vts~NIANanT~GYsRq~~~~~~~~~~ 49 (421)
T Consensus 5 ld~~~~~~~~AL~lR~~RqevlAsNIANadTPgYKArDldFe~~L~~ 51 (162)
T PRK12626 5 LDAEFAFGRQALDVRAYRQELLSSNIANADTPGYRARDVDFASTLAR 51 (162)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 78773610999999999999998500137899986435879999999