HHsearch alignment for GI: 254780525 and conserved domain: PRK12629

>PRK12629 flgC flagellar basal body rod protein FlgC; Provisional.
Probab=98.25  E-value=2.9e-06  Score=57.56  Aligned_cols=66  Identities=26%  Similarity=0.283  Sum_probs=55.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC------CCCCCEEHHHHHHCCCCCCCCCCCEEEEEEEEEE
Q ss_conf             94458899999999999986378877530277867------1422002465430477776312205885788630
Q gi|254780525|r    1 MGILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVG------YKRTAIAFSSLVFPSTSNSYVSGGLEISTKDMIS   69 (421)
Q Consensus         1 MSl~~~l~~a~SGL~A~q~al~vts~NIANanT~G------YsRq~~~~~~~~~~~~~~~~~G~GV~v~~i~r~~   69 (421)
T Consensus         1 Ms~~~~~~Is~Sgl~Aqr~Rm~~ia~NiANa~t~~~~~~~~yr~~~~vf~~~~~~~~---~~~~~V~v~~i~~d~   72 (135)
T PRK12629          1 MSNLPIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRQD---PSLTSVNVKEITTTN   72 (135)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCC---CCCCCEEEEEEECCC
T ss_conf             963657769999899999999999998774688898999877640112564432457---887866777754379