HHsearch alignment for GI: 254780525 and conserved domain: PRK12714
>PRK12714 flgK flagellar hook-associated protein FlgK; Provisional.
Probab=100.00 E-value=0 Score=310.10 Aligned_cols=73 Identities=29% Similarity=0.450 Sum_probs=67.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEE
Q ss_conf 9445889999999999998637887753027786714220024654304777763122058857886303411121
Q gi|254780525|r 1 MGILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTSNSYVSGGLEISTKDMISEQGSLMH 76 (421)
Q Consensus 1 MSl~~~l~~a~SGL~A~q~al~vts~NIANanT~GYsRq~~~~~~~~~~~~~~~~~G~GV~v~~i~r~~~~~~~~~ 76 (421)
T Consensus 1 msl---l~ig~sgL~a~Q~al~vt~~NIAN~nT~GYsRq~v~~~~~~~~~~~~~~~G~Gv~v~~i~R~~D~fl~~~ 73 (624)
T PRK12714 1 MSI---MSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKITDVGRVADQLAISR 73 (624)
T ss_pred CCH---HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHH
T ss_conf 971---7899999999999999884756516899803127787513675567864105789737998261899999