HHsearch alignment for GI: 254780525 and conserved domain: PRK12782
>PRK12782 flgC flagellar basal body rod protein FlgC; Reviewed.
Probab=98.40 E-value=7.3e-07 Score=61.34 Aligned_cols=65 Identities=26% Similarity=0.422 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-------CCCCCEEHHHHHHCCCCCCCCCCCEEEEEEEEEE
Q ss_conf 94458899999999999986378877530277867-------1422002465430477776312205885788630
Q gi|254780525|r 1 MGILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVG-------YKRTAIAFSSLVFPSTSNSYVSGGLEISTKDMIS 69 (421)
Q Consensus 1 MSl~~~l~~a~SGL~A~q~al~vts~NIANanT~G-------YsRq~~~~~~~~~~~~~~~~~G~GV~v~~i~r~~ 69 (421)
T Consensus 3 ~~L~~~~~Ia~sgm~Aq~~Rl~~iAsNlANa~st~~~~~~~py~~k~v~f~~~~~~~~----~~~gV~v~~i~~d~ 74 (138)
T PRK12782 3 DPLQASLRIASSGLEAQSTRLRVVSENLANAQSTGRTPGADPYQRKTVTFRAELDRAA----GAALVRVKEIGVDT 74 (138)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHCCCC----CCCCEEEEEEECCC
T ss_conf 0789999999999999999999999877424667879888764013223413103446----77741341334389