HHsearch alignment of GI: 254780525 and MMDB domain: 2d4y_A_1-268_356-463

>2d4y_A (A:1-268,A:356-463) HAP1, flagellar HOOK-associated protein 1; multi-domain protein, alpha-helical bundle, complex all- beta folds, structural protein; 2.10A {Salmonella typhimurium}
Probab=96.49  E-value=0.0005  Score=42.88  Aligned_cols=19  Identities=16%  Similarity=0.232  Sum_probs=15.7

Q ss_pred             CCEECCCCCHHHHHHHHHH
Q ss_conf             3100047789999999999
Q gi|254780525|r  376 GALETANVDIASELTELIE  394 (421)
Q Consensus       376 ~~le~SgVnlDEEm~nLi~  394 (421)
                      ...+.|||||||||+||||
T Consensus       358 ~r~svSGVnlDEE~anlik  376 (376)
T 2d4y_A          358 QQQSVSGVNLDEEYGNLQR  376 (376)
T ss_dssp             HHHC---------------
T ss_pred             HHHHHHCCCHHHHHHHHCC
T ss_conf             9984206179999998549