RPSBLAST alignment for GI: 254780525 and conserved domain: TIGR02489
>gnl|CDD|131542 TIGR02489, flgE_epsilon, flagellar hook protein FlgE, epsilon proteobacterial. Members of this family are flagellar hook proteins, designated FlgE, as found in the epsilon subdivision of the Proteobacteria (Helicobacter, Wolinella, and Campylobacter). These proteins differ significantly in architecture from proteins designated FlgE in other lineages; the N-terminal and C-terminal domains are homologous, but members of this family only contain a large central domain that is surface-exposed and variable between strains. Length = 719
Score = 79.2 bits (195), Expect = 2e-15
Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 15/262 (5%)
Query: 171 NATIITPDKTPKHNGRDAEYTHKSSFAAYDTLGSSVVYDVYYTKTGDKKWEVSIFRQDQS 230
N +T + K + + H + D+LGS +V + K G +W I + +
Sbjct: 462 NTGPLTEGGSIKESEQLKLAAHSAGLDIVDSLGSKHTLEVQFVKQGGNEWSFIIRVPEPA 521
Query: 231 TNNSFP---YNVAPLNTVEVSFDPVTGYLANSSHKAISFN-DNTSGIDQQITIDISKTTQ 286
N N+ + D G LA + I F+ N + Q+I + T+
Sbjct: 522 EFNGGSGEGPNIFEGGRARFNND---GSLAGMNPPTIQFSPKNGAAPPQRIKLSFG-TSG 577
Query: 287 LAGGFIPQKSE-------INGHAPGKPKDFSVSKDGYVDIIYDDGTRVPIYRLAIATVPS 339
G NG+ G KD +G + + +G + ++A+A+ +
Sbjct: 578 TFDGLTSSDKASTTTGIAQNGYQSGNLKDIRFDSNGNLLGEFSNGKTFALAQVAMASFAN 637
Query: 340 EDNLKLFDGNTYLPTRDSGDISIGFPGHNQHGEIFSGALETANVDIASELTELIEAQRNY 399
L+ GN + T +SG+ +G G GE+ + ALE +NVD++ LT+LI QR +
Sbjct: 638 NSGLQAEGGNLFSQTANSGEPVVGEAGTGGRGEMSTSALEMSNVDLSRSLTQLIVVQRGF 697
Query: 400 AVNSKVFQTGSDFMDILISLKR 421
NSK T ++ L+ LK+
Sbjct: 698 QANSKTVTTSDQILNTLLQLKQ 719