HHsearch alignment for GI: 254780526 and conserved domain: COG3279

Probab=98.84  E-value=2.3e-09  Score=79.47  Aligned_cols=112  Identities=15%  Similarity=0.227  Sum_probs=88.7

Q ss_pred             EEEECCCHHHHHHHHHHHHHC-CCEEE-EEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCC-CCCCEECC
Q ss_conf             689709899999999999978-98899-9828589999998289967999900789662179998631013-32100002
Q gi|254780526|r    2 FVLIDDRALVKDGYIALFGDD-GVSLE-GFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAH-SQVPLIGI   78 (223)
Q Consensus         2 ILiVeDd~~~~~~l~~~L~~~-g~~v~-~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~-~~~pII~l   78 (223)
T Consensus         4 i~i~dd~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fldI~~--~~~~G~ela~~i~~~~~~~~Ivfv   81 (244)
T COG3279           4 VLIVDDEPLAREELRRILNEIPDIEIVGEAENGEEALQLLQGLRPDLVFLDIAM--PDINGIELAARIRKGDPRPAIVFV   81 (244)
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCEEEEEECC--CCCCHHHHHHHHCCCCCCCEEEEE
T ss_conf             177147676799999998874421111331230317888760257769997237--652449999986156988539999


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             443210000111222010001023333321000001112
Q gi|254780526|r   79 SDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYR  117 (223)
Q Consensus        79 t~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lR  117 (223)
T Consensus        82 t~~~~~a--~~afev~a~d~i~kp~~~~~l~~~l~~~~~  118 (244)
T COG3279          82 TAHDEYA--VAAFEVEALDYLLKPISEERLAKTLERLRR  118 (244)
T ss_pred             EEHHHHH--HHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             8615432--333133466774285426899999999888