HHsearch alignment for GI: 254780526 and conserved domain: COG3437

>COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms].

Probab=99.79  E-value=1.1e-19  Score=144.41  Aligned_cols=114  Identities=20%  Similarity=0.260  Sum_probs=104.1

Q ss_pred             CEEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHC-CC---CCCEE
Q ss_conf             968970989999999999997898899982858999999828996799990078966217999863101-33---21000
Q gi|254780526|r    1 MFVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRA-HS---QVPLI   76 (223)
Q Consensus         1 ~ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~-~~---~~pII   76 (223)
T Consensus        16 ~vl~vDD~~~~~~~~~~lL~~~~y~v~~ae~g~~a~kl~~~~~~dlvllD~--~mp~mdg~ev~~~lk~~~p~t~~ip~i   93 (360)
T COG3437          16 TVLLVDDEPDNLEALRQLLRMIGYRVIEAENGEEALKLLQEEPPDLVLLDV--RMPEMDGAEVLNKLKAMSPSTRRIPVI   93 (360)
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCEEEEEC--CCCCCCHHHHHHHHHHCCCCCCCCCEE
T ss_conf             488965866689999999974264146414750778875116885677642--577765999999987249765653259


Q ss_pred             CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf             0244321000011122201000102333332100000111
Q gi|254780526|r   77 GISDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIY  116 (223)
Q Consensus        77 ~lt~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~l  116 (223)
T Consensus        94 ~lT~~~d~~~~~~~~~~g~~dyl~KP~~~~~l~~rv~~~~  133 (360)
T COG3437          94 LLTAYADSEDRQRALEAGADDYLSKPISPKELVARVSSHL  133 (360)
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             9860587699999997247777528898899999999999