HHsearch alignment for GI: 254780526 and conserved domain: PRK09581
>PRK09581 pleD response regulator PleD; Reviewed.
Probab=98.86 E-value=9.8e-09 Score=75.52 Aligned_cols=115 Identities=21% Similarity=0.286 Sum_probs=92.4
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCC---CCCCEECC
Q ss_conf 689709899999999999978988999828589999998289967999900789662179998631013---32100002
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAH---SQVPLIGI 78 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~---~~~pII~l 78 (223)
T Consensus 158 il~v~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~l~~~~~~~~d~~i~~~--~~~~~~~~~~~~~~r~~~~~~~~~i~~~ 234 (457)
T PRK09581 158 ILLVDDDVSQAERIANILKEE-FRVDVLSDPEEALIRAAEGNYDLIIVSA--SFENYDPLRLCSQLRSKERTRYVPILLL 234 (457)
T ss_pred EEEECCCHHHHHHHHHHHHHH-CCEEEECCHHHHHHHHCCCCCCEEEECC--CCCCCCHHHHHHHHHCCCCCCCCEEEEE
T ss_conf 999879679999999997533-2468854869999874357976899756--5676646899999971434357329999
Q ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 44321000011122201000102333332100000111222
Q gi|254780526|r 79 SDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRL 119 (223)
Q Consensus 79 t~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~ 119 (223)
T Consensus 235 ~~~~~~~~~~~~~~~g~~d~~~~~~~~~e~~~r~~~~~~~~ 275 (457)
T PRK09581 235 VDEDEDPRLVKALELGVNDYLMRPIDKNELLARVRTQIRRK 275 (457)
T ss_pred ECCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 56886166766641465228843786275558799999988