HHsearch alignment for GI: 254780526 and conserved domain: PRK10610
>PRK10610 chemotaxis regulatory protein CheY; Provisional.
Probab=99.89 E-value=3.2e-23 Score=166.72 Aligned_cols=117 Identities=17% Similarity=0.201 Sum_probs=107.9
Q ss_pred EEEECCCHHHHHHHHHHHHHCCC-EEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCC---CCCCEEC
Q ss_conf 68970989999999999997898-8999828589999998289967999900789662179998631013---3210000
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGV-SLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAH---SQVPLIG 77 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~-~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~---~~~pII~ 77 (223)
T Consensus 8 ILivDD~~~~r~~l~~~L~~~g~~~v~~a~~g~~al~~~~~~~~Dlil~D~~M--P~~dG~el~~~ir~~~~~~~~Pii~ 85 (129)
T PRK10610 8 FLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFVISDWNM--PNMDGLELLKTIRADGAMSALPVLM 85 (129)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCEEEEECCC--CCCCHHHHHHHHHHCCCCCCCCEEE
T ss_conf 99997989999999999998699789998999999999985899999981899--9998999999998577778996899
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 2443210000111222010001023333321000001112222
Q gi|254780526|r 78 ISDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLK 120 (223)
Q Consensus 78 lt~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~ 120 (223)
T Consensus 86 ~T~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~vl~r~g 128 (129)
T PRK10610 86 VTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLG 128 (129)
T ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf 9886899999999986998899898999999999999997639