HHsearch alignment for GI: 254780526 and conserved domain: PRK10701
>PRK10701 DNA-binding transcriptional regulator RstA; Provisional.
Probab=100.00 E-value=0 Score=389.53 Aligned_cols=219 Identities=18% Similarity=0.206 Sum_probs=202.1
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCCC
Q ss_conf 68970989999999999997898899982858999999828996799990078966217999863101332100002443
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAHSQVPLIGISDY 81 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~~~~pII~lt~~ 81 (223)
T Consensus 4 ILlVEDd~~l~~~l~~~L~~~g~~v~~a~~g~~a~~~~~~~~~DlvilDi~L--P~~dG~~l~~~iR~~~~~PiI~lta~ 81 (240)
T PRK10701 4 IVFVEDDAEVGSLIAAYLAKHDIDVTVEPRGDRAEETILREQPDLVLLDIML--PGKDGMTICRDLRPKWSGPIVLLTSL 81 (240)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCC--CCCCCCEEEEECCCCCCCCEEEEEEC
T ss_conf 9999799999999999998879999998999999999861799999992899--76788787631102589878999405
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC-------------CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21000011122201000102333332100000111222222-------------21122222222222222222223321
Q gi|254780526|r 82 PSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVS-------------NNRAETGPIRVFSDGRDPEVQGEVFP 148 (223)
Q Consensus 82 ~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~~-------------~~~~~~~~~~~~~~~~~~~~~g~~i~ 148 (223)
T Consensus 82 ~~~~d~v~gl~~GADDYl~KPf~~~eL~aRi~a~lrr~~~~~~~~~~~~~~~~~~~~~~~g~l~ld~~~~~v~~~g~~i~ 161 (240)
T PRK10701 82 DSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNEQATQAKGLQETSLTPYKALHFGTLTIDPINRVVTLAGEEIS 161 (240)
T ss_pred CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCEEEECCEEEE
T ss_conf 75788999997688776417998799999999999653254443222345557664389877999888899999999987
Q ss_pred CCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCEEEECCCCEEECCC
Q ss_conf 242101234432112883400899998652876577766136889999998601456-777157786863031388
Q gi|254780526|r 149 LPRRERRILEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKL-GFDPVDSKRFLGYSIDWN 223 (223)
Q Consensus 149 LT~~E~~lL~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~-~~~~I~tvrg~GY~l~~n 223 (223)
T Consensus 162 LT~~E~~lL~~L~~~~g~vvsre~L~~~vwg~-~~~~~~rtvdv~I~rLRkKl~~~~~~~~~I~TvrG~GY~f~p~ 236 (240)
T PRK10701 162 LSTADFELLWELATHAGQIMDRDALLKNLRGV-SYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNKGYLFAPH 236 (240)
T ss_pred CCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCC
T ss_conf 67899999999997799873899999985398-8788867899999999998752889998399981818518577