HHsearch alignment for GI: 254780526 and conserved domain: PRK11083
>PRK11083 DNA-binding response regulator CreB; Provisional.
Probab=100.00 E-value=0 Score=382.18 Aligned_cols=217 Identities=26% Similarity=0.352 Sum_probs=200.2
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHC-CCCCCEECCCC
Q ss_conf 68970989999999999997898899982858999999828996799990078966217999863101-33210000244
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRA-HSQVPLIGISD 80 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~-~~~~pII~lt~ 80 (223)
T Consensus 6 ILiVEDd~~l~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~DlvilDi~L--P~~~G~~l~~~iR~~~~~~pII~lta 83 (229)
T PRK11083 6 ILLVEDEQAIADTLVYALQSEGFTVEWFERGLPALDKLRQQPPDLVILDVGL--PDISGFELCRQLRAFHPALPVIFLTA 83 (229)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCC--CCCCHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 9999699999999999999889999998999999999971899899973889--99876889999997089972999836
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 321000011122201000102333332100000111222222----2112222222222222222222332124210123
Q gi|254780526|r 81 YPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVS----NNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRI 156 (223)
Q Consensus 81 ~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~~----~~~~~~~~~~~~~~~~~~~~~g~~i~LT~~E~~l 156 (223)
T Consensus 84 ~~~~~d~i~~l~~GADDYl~KPf~~~EL~aRi~a~lrR~~~~~~~~~~~~~~~~~~ld~~~~~v~~~g~~i~LT~~E~~L 163 (229)
T PRK11083 84 RSDEVDRLVGLEIGADDYVAKPFSPREVAARVRTILRRVKKFAAPSPVIRIAGHFELDEPGARISYFGTPLSLTRYEFLL 163 (229)
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCCCEEEECCEECCCCHHHHHH
T ss_conf 78989999999759987730874289999999999976435677776325647889987861999999954599999999
Q ss_pred HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCEEEECCCCEEEC
Q ss_conf 4432112883400899998652876577766136889999998601456-7771577868630313
Q gi|254780526|r 157 LEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKL-GFDPVDSKRFLGYSID 221 (223)
Q Consensus 157 L~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~-~~~~I~tvrg~GY~l~ 221 (223)
T Consensus 164 L~~L~~~~g~vvsr~~L~~~vw~~-~~~~~~rtidv~I~rLR~KL~~~~~~~~~I~TvrG~GY~l~ 228 (229)
T PRK11083 164 LKTLLLSPGRVFSRQQLMDIVWED-AQDSYDRTVDTHIKTLRAKLRAINPDLSPIRTHRGLGYSLR 228 (229)
T ss_pred HHHHHHCCCCEECHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEC
T ss_conf 999986799409699999985599-88888466999999999987526899985999789656973