HHsearch alignment for GI: 254780526 and conserved domain: PRK11466

>PRK11466 hybrid sensory histidine kinase TorS; Provisional.
Probab=99.78  E-value=5.5e-19  Score=140.05  Aligned_cols=114  Identities=15%  Similarity=0.113  Sum_probs=100.2

Q ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH-HCCCCEEEEEEECCCCCCHHHHHHHHHHC-CCCCCEECCC
Q ss_conf             689709899999999999978988999828589999998-28996799990078966217999863101-3321000024
Q gi|254780526|r    2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQS-SAREDVSAIEAFLIGKGEKVLELPRIIRA-HSQVPLIGIS   79 (223)
Q Consensus         2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~-~~~~d~~iid~~l~~~~~~g~~l~~~lr~-~~~~pII~lt   79 (223)
T Consensus       684 VLvVEDn~~N~~v~~~~L~~lG~~v~~A~nG~eAle~l~~~~~fDlVLmDi~--MP~mDG~eatr~iR~~~~~~pIIAlT  761 (912)
T PRK11466        684 LLLIEDNPLTQRITVEMLNTSGAQVVAVGNAAQALETLQNSEPFAAALVDFD--LPDYDGITLARQLAQQYPSLVLIGFS  761 (912)
T ss_pred             EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCC--CCCCCHHHHHHHHHHCCCCCCEEEEC
T ss_conf             9999487889999999999869989998999999999971899858987699--99998999999998619999789977


Q ss_pred             CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             43210000111222010001023333321000001112
Q gi|254780526|r   80 DYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYR  117 (223)
Q Consensus        80 ~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lR  117 (223)
T Consensus       762 A~a~~ed~~~~l~aGmd~~L~KPv~~~~L~~~l~~~l~  799 (912)
T PRK11466        762 AHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYLQ  799 (912)
T ss_pred             CCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHC
T ss_conf             98788999999976998775498999999999999846