HHsearch alignment for GI: 254780526 and conserved domain: PRK11906
>PRK11906 transcriptional regulator; Provisional.
Probab=99.17 E-value=3.8e-11 Score=90.70 Aligned_cols=82 Identities=18% Similarity=0.192 Sum_probs=74.3
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCC
Q ss_conf 22222223321242101234432112883400899998652876577766136889999998601456777157786863
Q gi|254780526|r 138 RDPEVQGEVFPLPRRERRILEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKLGFDPVDSKRFLG 217 (223)
Q Consensus 138 ~~~~~~g~~i~LT~~E~~lL~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~~~~~I~tvrg~G 217 (223)
T Consensus 21 giL~~~nk~v~IPpKElgVLilLLesAGelVsKd~iid~VW~--~~~VseESLTRCIYaLRril~e~k~~RyIeTvYgkG 98 (458)
T PRK11906 21 GILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK--NIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKG 98 (458)
T ss_pred EEEECCCCEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHCC--CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHCCC
T ss_conf 056625746601868887899887526716609889998525--775573138899999999986505661552200475
Q ss_pred EEEC
Q ss_conf 0313
Q gi|254780526|r 218 YSID 221 (223)
Q Consensus 218 Y~l~ 221 (223)
T Consensus 99 YRFs 102 (458)
T PRK11906 99 YRFS 102 (458)
T ss_pred EEEE
T ss_conf 2650