HHsearch alignment for GI: 254780526 and conserved domain: PRK13856
>PRK13856 two-component response regulator VirG; Provisional.
Probab=100.00 E-value=0 Score=359.64 Aligned_cols=218 Identities=21% Similarity=0.229 Sum_probs=197.7
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCC-
Q ss_conf 6897098999999999999789889998285899999982899679999007896621799986310133210000244-
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAHSQVPLIGISD- 80 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~~~~pII~lt~- 80 (223)
T Consensus 4 ILlVEDD~~l~~~l~~~L~~~g~~v~~a~~~~~~~~~l~~~~~DlvIlDi~l--p~~~Gl~~~~~ir~~~~~piiilt~~ 81 (241)
T PRK13856 4 VLVIDDDVAMRHLIVEYLTIHAFKVTAVADSQQFNRVLSSETVDVVVVDLNL--GREDGLEIVRSLATKSDVPIIIISGD 81 (241)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCC--CCCCCHHHHHHHCCCCCCCEEEEECC
T ss_conf 9999698999999999998779999998999999999865999999996999--87661345556403699736999726
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCH
Q ss_conf 32100001112220100010233333210000011122222-----2211222222222222222-22223321242101
Q gi|254780526|r 81 YPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKV-----SNNRAETGPIRVFSDGRDP-EVQGEVFPLPRRER 154 (223)
Q Consensus 81 ~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~-----~~~~~~~~~~~~~~~~~~~-~~~g~~i~LT~~E~ 154 (223)
T Consensus 82 ~~~~~d~i~~l~~GADDYl~KPf~~~EL~aRi~~~lrr~~~~~~~~~~~~~~~~~~~ld~~~~~l~~~~~~~v~LT~~E~ 161 (241)
T PRK13856 82 RLEEADKVVALELGATDFIAKPFGTREFLARIRVALRVRPNVVRTKDRRSFCFADWTLNLRQRRLISEAGGEVKLTAGEF 161 (241)
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEECCCCEEEEECCEEEECCHHHH
T ss_conf 78789999998769988997776777999999999874546567776744998999997578789997996986788999
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCEEEECCCCEEECC
Q ss_conf 234432112883400899998652876577766136889999998601456-77715778686303138
Q gi|254780526|r 155 RILEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKL-GFDPVDSKRFLGYSIDW 222 (223)
Q Consensus 155 ~lL~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~-~~~~I~tvrg~GY~l~~ 222 (223)
T Consensus 162 ~lL~~L~~~~~~vvsRe~L~~~~~~~-~~~~~~r~id~~I~rLRkKL~~~~~~~~~I~TvrG~GY~f~~ 229 (241)
T PRK13856 162 NLLVAFLEKPRDVLSREQLLIASRVR-EEEVYDRSIDVLILRLRRKLEQDPANPQLIKTARGAGYFFDA 229 (241)
T ss_pred HHHHHHHHCCCCEEEHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEE
T ss_conf 99999987699438199999984456-778886869999999999731388999809977371549823