HHsearch alignment for GI: 254780526 and conserved domain: TIGR02154

>TIGR02154 PhoB phosphate regulon transcriptional regulatory protein PhoB; InterPro: IPR011879 PhoB is a DNA-binding response regulator protein acting with PhoR in a 2-component system responding to phosphate ion. PhoB acts as a positive regulator of gene expression for phosphate-related genes such as phoA, phoS, phoE and ugpAB as well as itself . It is often found proximal to genes for the high-affinity phosphate ABC transporter (pstSCAB; GenProp0190) and presumably regulates these as well.; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0006817 phosphate transport.
Probab=100.00  E-value=0  Score=469.67  Aligned_cols=217  Identities=24%  Similarity=0.369  Sum_probs=209.0

Q ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCC---CCCEECC
Q ss_conf             6897098999999999999789889998285899999982899679999007896621799986310133---2100002
Q gi|254780526|r    2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAHS---QVPLIGI   78 (223)
Q Consensus         2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~~---~~pII~l   78 (223)
T Consensus         5 iLvVEDE~AirEl~~~~L~~~gy~v~~A~d~~~A~~~~~E~~PDLILLDWML--PG~SGIel~R~Lr~~~~Tr~iPIIML   82 (226)
T TIGR02154         5 ILVVEDEPAIRELIAYNLEKAGYDVVEAGDGDEALTLINERLPDLILLDWML--PGTSGIELARRLRREPETRAIPIIML   82 (226)
T ss_pred             EEEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCEEEECCCC--CCCCHHHHHHHHCCCCCCCCCCEEEE
T ss_conf             5677082689999999841689469980797999999860799889961478--99756999987347633148881774


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             44321000011122201000102333332100000111222222--2112222222222222222222332124210123
Q gi|254780526|r   79 SDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVS--NNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRI  156 (223)
Q Consensus        79 t~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~~--~~~~~~~~~~~~~~~~~~~~~g~~i~LT~~E~~l  156 (223)
T Consensus        83 TARGeE~Drv~GLetGADDYvtKPFSp~EL~ARikAVLRR~~P~~~~~~i~~~~l~lD~~~HRV~~~~~~~~lGPTEfRL  162 (226)
T TIGR02154        83 TARGEEEDRVRGLETGADDYVTKPFSPRELLARIKAVLRRIRPELSDEVIEVGDLELDPVAHRVKRGGQPLELGPTEFRL  162 (226)
T ss_pred             ECCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHCCEEEECCEEECCCCCEEEECCEECCCCCHHHHH
T ss_conf             05556000113113688750367886588999999998316712420201103477751024043136021468704788


Q ss_pred             HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEC
Q ss_conf             44321128834008999986528765777661368899999986014567771577868630313
Q gi|254780526|r  157 LEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKLGFDPVDSKRFLGYSID  221 (223)
Q Consensus       157 L~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~~~~~I~tvrg~GY~l~  221 (223)
T Consensus       163 L~FFM~HPeRV~SReQLLD~VWG~-dvyVE~RTVDVHIRRLRKaL~~~g~~~~vqTVRGaGYrfs  226 (226)
T TIGR02154       163 LHFFMTHPERVYSREQLLDRVWGR-DVYVEERTVDVHIRRLRKALEPGGLEDLVQTVRGAGYRFS  226 (226)
T ss_pred             HHHHHHCCCCEEEHHHHHHHHCCC-CEEEECCCEEEEECCHHHHCCCCCCCCCEEEECCCCCCCC
T ss_conf             999862377344042320110589-4325135000322000542387888871565104662589