HHsearch alignment for GI: 254780526 and conserved domain: cd04728
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=92.31 E-value=0.46 Score=27.19 Aligned_cols=86 Identities=13% Similarity=0.030 Sum_probs=58.6
Q ss_pred HHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCC---CCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 9999978988999828589999998289967999900789---6621799986310133210000244321000011122
Q gi|254780526|r 16 IALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIG---KGEKVLELPRIIRAHSQVPLIGISDYPSLQTTLDFFD 92 (223)
Q Consensus 16 ~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~---~~~~g~~l~~~lr~~~~~pII~lt~~~~~~~~i~~l~ 92 (223)
T Consensus 116 ae~Lv~~GF~VlpY~~~D~v~akrLe~~Gc~avMPlgsPIGSg~Gl~n~~~l~~i~e~~~vPvIVDAGiG~pS~Aa~aME 195 (248)
T cd04728 116 AEILVKEGFTVLPYCTDDPVLAKRLEDAGCAAVMPLGSPIGSGQGLLNPYNLRIIIERADVPVIVDAGIGTPSDAAQAME 195 (248)
T ss_pred HHHHHHCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
T ss_conf 99999889989786788999999999749534520456434798879999999999847998898479997567899987
Q ss_pred CCCEEEEEC
Q ss_conf 201000102
Q gi|254780526|r 93 SGVDDVVNK 101 (223)
Q Consensus 93 ~GAddyl~K 101 (223)
T Consensus 196 lG~daVL~N 204 (248)
T cd04728 196 LGADAVLLN 204 (248)
T ss_pred CCCCEEEHH
T ss_conf 265533454