HHsearch alignment for GI: 254780526 and conserved domain: pfam00486
>pfam00486 Trans_reg_C Transcriptional regulatory protein, C terminal.
Probab=99.73 E-value=3.5e-18 Score=135.03 Aligned_cols=76 Identities=34% Similarity=0.573 Sum_probs=69.5
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCEEEECCCCEEE
Q ss_conf 23321242101234432112883400899998652876577766136889999998601456-777157786863031
Q gi|254780526|r 144 GEVFPLPRRERRILEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKL-GFDPVDSKRFLGYSI 220 (223)
Q Consensus 144 g~~i~LT~~E~~lL~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~-~~~~I~tvrg~GY~l 220 (223)
T Consensus 1 G~~i~Lt~~E~~lL~~L~~~~~~~vsr~~l~~~iw~~-~~~~~~~sl~~~I~rLR~kl~~~~~~~~~I~tv~g~GY~L 77 (77)
T pfam00486 1 GEEVELTPKEFDLLELLARNPGRVVSREELLEEVWGE-DFDVDDNTVDVHISRLRKKLEDDPRDPRLIKTVRGVGYRL 77 (77)
T ss_pred CCEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf 9672338999999999996799719799999996387-6665533099999999998754489998399848966449