HHsearch results for GI: 254780526 and protein with PDBid: 3c3m_A
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=99.89 E-value=2.4e-23 Score=166.19 Aligned_cols=118 Identities=14% Similarity=0.240 Sum_probs=109.0
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCC---CCCEECC
Q ss_conf 6897098999999999999789889998285899999982899679999007896621799986310133---2100002
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAHS---QVPLIGI 78 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~~---~~pII~l 78 (223)
|||||||+..++.+...|+..||.|..+.+++++.......+||++++|+.| |++||+++++.+|+.+ ++|||++
T Consensus 6 ILIVDD~~~~~~~l~~~L~~~G~~v~~a~~g~eal~~l~~~~pdliilD~~m--P~~dG~el~~~ir~~~~~~~ipvI~l 83 (138)
T 3c3m_A 6 ILVVDDSPMIVDVFVTMLERGGYRPITAFSGEECLEALNATPPDLVLLDIMM--EPMDGWETLERIKTDPATRDIPVLML 83 (138)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESCC--SSSCHHHHHHHHHHSTTTTTSCEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCC--CCCCHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 9999799999999999999879999998999999999753899899970678--99988999999984865589987998
Q ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 4432100001112220100010233333210000011122222
Q gi|254780526|r 79 SDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKV 121 (223)
Q Consensus 79 t~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~ 121 (223)
|+.++..++.+++++||+||++|||++++|.++++++++|...
T Consensus 84 s~~~~~~~~~~~~~~G~~d~l~KP~~~~~L~~~l~~~l~r~~~ 126 (138)
T 3c3m_A 84 TAKPLTPEEANEYGSYIEDYILKPTTHHQLYEAIEHVLARRHS 126 (138)
T ss_dssp ESSCCCHHHHHHTTTTCSEEEECCCHHHHHHHHHHHHHSCC--
T ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 6379899999998679988998989999999999999996520