RPSBLAST alignment of GI: 254780526 and protein with PDBid: 1a04

>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A Length = 215

 Score = 59.9 bits (144), Expect = 5e-10
 Identities = 35/202 (17%), Positives = 76/202 (37%), Gaps = 16/202 (7%)

Query: 3   VLIDDRALVKDG---YIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEK 59
           +LIDD  +++ G    I++  D  V  E  N  +  E  +S   + +          G +
Sbjct: 9   LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 68

Query: 60  VLELPRIIRAHSQVPLIGISDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRL 119
            L+  R      ++ +  +S++   +  +     G D  + K +   ++L  +       
Sbjct: 69  TLDKLREKSLSGRIVVFSVSNHE--EDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 126

Query: 120 KVSNNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRILEYLMANRGKRVAKTQIFSAIYG 179
            V +  A T  +           + +V  L  RER IL+ +      ++   ++      
Sbjct: 127 MVLSE-ALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD----- 180

Query: 180 LFDEAVEENVVESHISKLRKKL 201
                + E+ V+ H+  + KK+
Sbjct: 181 -----ITESTVKVHVKHMLKKM 197