RPSBLAST alignment of GI: 254780526 and protein with PDBid: 1yio

>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A Length = 208

 Score = 47.6 bits (112), Expect = 2e-06
 Identities = 29/199 (14%), Positives = 69/199 (34%), Gaps = 23/199 (11%)

Query: 4   LIDDRALVKDGYIALFGDDGVSLEGFNS-LEFEEWLQSSAREDVSAIEAFLIGKGEKVLE 62
           ++DD   V++G   L    G  +E F+    F E  +      +          G ++ E
Sbjct: 9   VVDDDMSVREGLRNLLRSAGFEVETFDCASTFLEHRRPEQHGCLVLDMRMPGMSGIELQE 68

Query: 63  LPRIIRAHSQVPLIGISDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVS 122
                     +P++ I+ +  +  T+    +G  + + KP   + +L  +    +     
Sbjct: 69  QLT--AISDGIPIVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQALLDAIEQGLQL---- 122

Query: 123 NNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRILEYLMANRGKRVAKTQIFSAIYGLFD 182
                    R  +     +++     L  RE+++L+  +     +    ++         
Sbjct: 123 ------NAERRQARETQDQLEQLFSSLTGREQQVLQLTIRGLMNKQIAGELG-------- 168

Query: 183 EAVEENVVESHISKLRKKL 201
             + E  V+ H   + +KL
Sbjct: 169 --IAEVTVKVHRHNIMQKL 185