RPSBLAST alignment of GI: 254780526 and protein with PDBid: 2hqr

>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, symmetric dimer, signaling protein; NMR {Helicobacter pylori J99} Length = 223

 Score = 55.8 bits (133), Expect = 7e-09
 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 8/87 (9%)

Query: 132 RVFSDGRDPEVQGEVFPLPRRERRILEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVE 191
           ++   GR+ EV+G+ F        +L +L  +R + V+K Q+  AI+    E V  NV+E
Sbjct: 134 KIIYKGREVEVKGKPF-------EVLTHLARHRDQIVSKEQLLDAIWE-EPEMVTPNVIE 185

Query: 192 SHISKLRKKLRNKLGFDPVDSKRFLGY 218
             I+++R+K+   LG   V++ R  GY
Sbjct: 186 VAINQIRQKMDKPLGISTVETVRRRGY 212