RPSBLAST alignment of GI: 254780526 and protein with PDBid: 2qsj

>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3} Length = 154

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 18/120 (15%), Positives = 46/120 (38%), Gaps = 6/120 (5%)

Query: 3   VLIDDRALVKDGYIALFGD--DGVSLEGF-NSLEFEEWLQSSAREDVSAIEAFLIGKGEK 59
           +++DD  L++ G   L      G+ +EG     +   +L++    D+  ++  L     +
Sbjct: 7   LIVDDHHLIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNL--PDAE 64

Query: 60  VLELPRIIRA-HSQVPLIGISDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRR 118
            ++    ++       +  IS     +      ++G D  + K    + ++  V+ I   
Sbjct: 65  AIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADGFIPKSADPQVLIHAVSLILEG 124