RPSBLAST alignment of GI: 254780526 and protein with PDBid: 2qzj

>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics, protein structure initiative; 2.89A {Clostridium difficile 630} Length = 136

 Score = 45.2 bits (106), Expect = 1e-05
 Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 2/117 (1%)

Query: 4   LIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLEL 63
           +ID              + G+S++       EE +          I   +I        L
Sbjct: 9   IIDGDKDNCQKLKGFLEEKGISIDLAY--NCEEAIGKIFSNKYDLIFLEIILSDGDGWTL 66

Query: 64  PRIIRAHSQVPLIGISDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLK 120
            + IR  +  P++ ++     Q+ L+  +SG DD + KP++   + A+V AI RR+ 
Sbjct: 67  CKKIRNVTTCPIVYMTYINEDQSILNALNSGGDDYLIKPLNLEILYAKVKAILRRMN 123