RPSBLAST alignment of GI: 254780526 and protein with PDBid: 3h5i

>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901} Length = 140

 Score = 52.0 bits (124), Expect = 1e-07
 Identities = 15/124 (12%), Positives = 41/124 (33%)

Query: 4   LIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLEL 63
           +++D          +    G ++E   + E      S        +    +G+G   ++ 
Sbjct: 10  IVEDSKFQAKTIANILNKYGYTVEIALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQT 69

Query: 64  PRIIRAHSQVPLIGISDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVSN 123
              I+  S++P++ ++ +                 V K    + ++  V    R  + + 
Sbjct: 70  ALAIQQISELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITIVEMALRLYEANV 129

Query: 124 NRAE 127
           +  E
Sbjct: 130 HANE 133