BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780528|ref|YP_003064941.1| chemotaxis protein [Candidatus Liberibacter asiaticus str. psy62] (396 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|241203120|ref|YP_002974216.1| chemotaxis protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857010|gb|ACS54677.1| chemotaxis motility protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 431 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 103/423 (24%), Positives = 185/423 (43%), Gaps = 30/423 (7%) Query: 3 QKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVK 62 Q + + + + + + + PY+ +RSLQ D + GD S + ++ Sbjct: 5 QHRYVGFVALGLAMLSPAGGNAQDPDDLAPYKMLRSLQFVQDSVVSGDHSAGEMQRFMLG 64 Query: 63 ETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYF 122 +LR F D+RN+DA IY + + ++ LIA D GYFD + L+KY Sbjct: 65 TIDERLRTVDPSTFDDDRNVDAALIYAMSGGNPQTLEYLIAHDVNGYFDNRVTDVLRKYL 124 Query: 123 SGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLE 182 SG+ +K L + + + I PYL L+ G ++ A+ +D RL +PGT +E Sbjct: 125 SGKGLLVAKTLEETAREYRDKKIGPYLALIGGNVLIATKPTDALDLYDQARLAAPGTIVE 184 Query: 183 EIALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDI 241 E ALR + I + + +R Y + YV +F HS Y F + + + + +D+ Sbjct: 185 EAALRRSVAICVDKGMLDRGMAYSQRYVRRFLHSPYASQFADLFVTLVVGHDHDVKPQDV 244 Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENI 301 + +SF QR +YL+IA+ + ISGK ++ +A+ +++ + D + Y + Sbjct: 245 IDILSFMDAPRQREVYLRIARAAAISGKPELARMAVGRVQSLGAGTDNPFGSLADFYGGM 304 Query: 302 LNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHI------- 354 +P DI ++ I +L +D+ L++A+ + +I ++ Sbjct: 305 AGLPTEDIDQAAKNVSGIDGNALSPRDQALQEAARSVADQILRAPDPASLTQASDPNTDH 364 Query: 355 -------------QKDLLLDKKEPRHTNVSMGIES---------FIKKNRSQIESIDVLL 392 Q EP V+ +S F+ NRS+++ ID LL Sbjct: 365 QEITSEKAAAIATQPGAPGALPEPVPGGVASTGQSQDTDPSFNAFVTTNRSKLDEIDGLL 424 Query: 393 AEA 395 A+ Sbjct: 425 AQE 427 >gi|116250496|ref|YP_766334.1| chemotaxis protein [Rhizobium leguminosarum bv. viciae 3841] gi|115255144|emb|CAK06218.1| putative chemotaxis MotC protein precursor (motility protein c) [Rhizobium leguminosarum bv. viciae 3841] Length = 431 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 104/423 (24%), Positives = 187/423 (44%), Gaps = 30/423 (7%) Query: 3 QKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVK 62 Q + + + + + A + + PY+ +RSLQ D + GD S + ++ Sbjct: 5 QHRYVGFVALGLAMLSPAAANAQDSDDLAPYKMLRSLQFVQDSVVTGDHSAGEMQRFMLG 64 Query: 63 ETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYF 122 +LR +F D+RN+DA IYT+ + ++ LIA D GYFD + L+KY Sbjct: 65 TIDTRLRTVEPSIFDDDRNVDAALIYTMSGGNPQTLEYLIAHDVNGYFDNRVTDVLRKYL 124 Query: 123 SGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLE 182 SG+ +K L + + + I PYL L+ G ++ A+ +D RL +PGT +E Sbjct: 125 SGKGLLVAKTLQETAREYRDKKIGPYLALIGGNVLIATKPTDALDLYDQARLAAPGTIVE 184 Query: 183 EIALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDI 241 E ALR + I + + +R Y + YV +F HS Y F + + + + +D+ Sbjct: 185 EAALRRSVAICVDKGMLDRGMAYSQRYVRRFLHSPYASQFADLFVTLVVGHDHDVKPQDV 244 Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENI 301 + +SF QR +YL+IA+ + ISGK ++ +A+ +++ + D Y + Sbjct: 245 IDILSFMDAPRQREVYLRIARAAAISGKPELARMAVGRVQSLGGGTDNAFGPLADFYGGM 304 Query: 302 LNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHI------- 354 +P DI ++ I +L +D+ L++A+ + +I ++ Sbjct: 305 AGLPTEDIDQAAKNVSGIDGNALSRRDQALQEAARSVAEQILRAPDPASLTQASNLNTDH 364 Query: 355 -------------QKDLLLDKKEPRHTNVSMGIES---------FIKKNRSQIESIDVLL 392 Q EP V+ +S F+ +RS+++ ID LL Sbjct: 365 QEITSEKAAAIAMQPGAPGALSEPVPGGVASTGQSQDTDPSFNAFVTTSRSKLDEIDGLL 424 Query: 393 AEA 395 A+ Sbjct: 425 AQE 427 >gi|218461677|ref|ZP_03501768.1| chemotaxis protein [Rhizobium etli Kim 5] Length = 442 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 103/422 (24%), Positives = 186/422 (44%), Gaps = 30/422 (7%) Query: 3 QKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVK 62 Q M + + + A + PY+ +RSLQ D + GD S + ++ Sbjct: 5 QHRYFGFMALGLAMLSPAAGHAQDPDDLSPYKMLRSLQFVQDSVVAGDHSAGEMQRFMLG 64 Query: 63 ETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYF 122 +LR ++ D+RN+DA IYT+ + ++ LIA D GYFD + L+KY Sbjct: 65 TIDERLRTADTSIYDDDRNVDAALIYTMSGGNPQTLEYLIAHDVNGYFDNRVTEVLRKYL 124 Query: 123 SGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLE 182 SG+ ++ L + + + I PYL L+ G ++ A++ +D RL +PGT +E Sbjct: 125 SGKGLLVARTLEETAREYRDKKIGPYLALIGGNVLIATKPTDALNLYDQARLAAPGTIVE 184 Query: 183 EIALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDI 241 E ALR + I + + +R Y + Y +F HS Y F + ++ + + +D+ Sbjct: 185 EAALRRSVAICVDKGMLDRGLAYSQRYARRFLHSPYASQFADLFVKLVVAHDRDVKPQDV 244 Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENI 301 V +SF QR +YL+IA+ + ISGK ++ +A+++++ + D Y + Sbjct: 245 VDILSFMDAPRQREVYLRIARAAAISGKPELARMAVERVQSLGAGTDNAFGPLADFYGGM 304 Query: 302 LNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHI------- 354 +P DI ++ I +L +D+ L+ A+ + +I ++ Sbjct: 305 AGLPTQDIDQAAKNVSGIDGKALSPRDQALQAAARSVAEQILRAPDPASLTQASDPNTSH 364 Query: 355 -------------QKDLLLDKKEPRHTNVSMGIES---------FIKKNRSQIESIDVLL 392 Q EP V+ +S F+ +RS+++ ID LL Sbjct: 365 QEITSDKAAANAMQPGAPGAHPEPVPGGVASTGQSQDTDPSFNAFVTTSRSKLDEIDGLL 424 Query: 393 AE 394 A+ Sbjct: 425 AQ 426 >gi|209547942|ref|YP_002279859.1| chemotaxis protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533698|gb|ACI53633.1| chemotaxis motility protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 431 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 102/423 (24%), Positives = 188/423 (44%), Gaps = 30/423 (7%) Query: 3 QKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVK 62 Q + + + + + A + PY+ +RSLQ D + GD S + ++ Sbjct: 5 QHRYVGFVALGLAMLSPAAAKAQDPDDLAPYKMLRSLQFVQDSVVSGDHSAGEMQRFMLG 64 Query: 63 ETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYF 122 +LR+ VF D+RN+DA IY + + ++ LIA D G+FD + L+KY Sbjct: 65 TIDERLRSVDTSVFDDDRNVDAALIYAMSGGNPQTLEYLIAHDVNGHFDNRVTDVLRKYL 124 Query: 123 SGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLE 182 SG+ +K L + + + I PYL L+ G ++ + A+ +D RL +PGT +E Sbjct: 125 SGKGLLVAKTLEETAREYRDKKIGPYLALIGGNVLIATNPTDALDLYDQARLAAPGTIVE 184 Query: 183 EIALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDI 241 E ALR + I + + +R Y + Y+ +F HS Y F + + + + +D+ Sbjct: 185 EAALRRSVAICVDKGMLDRGMAYSQRYIRRFLHSPYASQFADLFVTLVVGHDHDVKPQDV 244 Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENI 301 + +SF QR +YL+IA+ + I+GK ++ +A+++++ + D Y + Sbjct: 245 IDILSFMDAPRQREVYLRIARAAAIAGKPQLAHMAVERVQSLGAGTDNAFGPLADFYGGM 304 Query: 302 LNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHI------- 354 +P DI ++ I +L +D+ L++A+ + +I ++ Sbjct: 305 AGLPTEDIDQAAKNVSGIAGNTLSPRDQALQEAARSVAEQILRAPDPASLTQASDPNTSD 364 Query: 355 -------------QKDLLLDKKEPRHTNVSMGIES---------FIKKNRSQIESIDVLL 392 Q EP V+ +S F+ NRS+++ ID LL Sbjct: 365 QEITSEKAAAIAPQPGAPGALPEPVPGGVASTGQSQGTDPSFNAFVTTNRSKLDEIDGLL 424 Query: 393 AEA 395 A+ Sbjct: 425 AQE 427 >gi|86356326|ref|YP_468218.1| chemotaxis protein [Rhizobium etli CFN 42] gi|86280428|gb|ABC89491.1| chemotaxis motility protein [Rhizobium etli CFN 42] Length = 431 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 104/423 (24%), Positives = 185/423 (43%), Gaps = 30/423 (7%) Query: 3 QKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVK 62 Q + M + + + A + PY+ +RSLQ D + GD S + ++ Sbjct: 5 QHRYVGFMALGLAMLSPAAGKAQDPDDLAPYKMLRSLQFVQDSVVAGDHSAGEMQRFMLG 64 Query: 63 ETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYF 122 +LR +F D+RN+DA IYT+ + ++ LIA D GYFD + L+KY Sbjct: 65 TIDERLRTADTKIFDDDRNVDAALIYTMSGGNPQTLEYLIAHDVNGYFDNRVTDVLRKYL 124 Query: 123 SGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLE 182 +G+ +K L + + + I PYL L+ G M+ A+ +D RL +PGT +E Sbjct: 125 TGKGLLVAKTLEETAREYRDKKIGPYLALIGGNVMIATKPTDALDLYDQARLAAPGTIVE 184 Query: 183 EIALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDI 241 E ALR L I + + ++ Y + Y +F HS Y F + ++ + + +D+ Sbjct: 185 EAALRRSLAICVDKGMLDKGLAYSQRYARRFLHSPYASQFADLFVKLVVAHDHDVKPQDV 244 Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENI 301 V +SF QR +YL+IA+ + I+GK ++ +A++ ++ + D Y + Sbjct: 245 VDILSFMDAPRQREVYLRIARAAAIAGKPELARMAVEHVQLLGAGTDNAFGPLADFYGGM 304 Query: 302 LNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHI------- 354 +P DI ++ I +L +D+ L+ A+ + +I ++ Sbjct: 305 AGLPTDDIDQAAKNVSGIDGEALSPRDQALQAAARSVAEQILRAPDPASLTQASNPNTSH 364 Query: 355 -------------QKDLLLDKKEPRHTNVSMGIES---------FIKKNRSQIESIDVLL 392 Q EP V+ +S F+ +RS+++ ID LL Sbjct: 365 QEITSEKAAAIATQPGTPGAPPEPVPGGVASTGQSQDTDSSFNAFVTTSRSKLDEIDGLL 424 Query: 393 AEA 395 A+ Sbjct: 425 AQE 427 >gi|254780528|ref|YP_003064941.1| chemotaxis protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040205|gb|ACT57001.1| chemotaxis protein [Candidatus Liberibacter asiaticus str. psy62] Length = 396 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 396/396 (100%), Positives = 396/396 (100%) Query: 1 MNQKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDI 60 MNQKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDI Sbjct: 1 MNQKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDI 60 Query: 61 VKETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKK 120 VKETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKK Sbjct: 61 VKETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKK 120 Query: 121 YFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTF 180 YFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTF Sbjct: 121 YFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTF 180 Query: 181 LEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDED 240 LEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDED Sbjct: 181 LEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDED 240 Query: 241 IVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYEN 300 IVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYEN Sbjct: 241 IVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYEN 300 Query: 301 ILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLL 360 ILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLL Sbjct: 301 ILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLL 360 Query: 361 DKKEPRHTNVSMGIESFIKKNRSQIESIDVLLAEAR 396 DKKEPRHTNVSMGIESFIKKNRSQIESIDVLLAEAR Sbjct: 361 DKKEPRHTNVSMGIESFIKKNRSQIESIDVLLAEAR 396 >gi|327193054|gb|EGE59966.1| chemotaxis motility protein [Rhizobium etli CNPAF512] Length = 431 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 102/423 (24%), Positives = 186/423 (43%), Gaps = 30/423 (7%) Query: 3 QKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVK 62 Q + M + + + A + + PY+ +RSLQ D + GD S + ++ Sbjct: 5 QHRYLGFMALGLAMLSPAAGNAQDPDDLSPYKMLRSLQFVQDSVVAGDHSAGEMQRFMLG 64 Query: 63 ETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYF 122 +LR ++ D+RN+DA IY + + ++ LIA D GYFD + L+KY Sbjct: 65 TIDERLRTADTSIYDDDRNVDAALIYAMSGGNPQTLEYLIAHDVNGYFDNRVTDVLRKYL 124 Query: 123 SGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLE 182 SG+ +K L + + + I PYL L+ G ++ A+ +D RL +PGT +E Sbjct: 125 SGKGLLVAKTLEETAREYRDKKIGPYLALIGGNVLIATKPTDALDLYDQARLAAPGTIVE 184 Query: 183 EIALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDI 241 E ALR + I + + ++ Y + Y +F HS Y F + ++ + + +D+ Sbjct: 185 EAALRRSVAICVDKGLLDKGLAYSQRYARRFLHSPYASQFADLFVKLVVAHDRDVKPQDV 244 Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENI 301 V +SF QR +YL+IA+ + ISGK ++ +A+++++ + D Y + Sbjct: 245 VDILSFMDAPRQREVYLRIARAAAISGKPELARMAVERVQSLGAGTDNAFGPLADFYGGM 304 Query: 302 LNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHI------- 354 +P DI ++ I +L +D+ L+ A+ + +I ++ Sbjct: 305 AGLPTQDIDQAAKNVSGIDGNALSPRDQALQAAARSVAEQILRAPDPTSLTQASDPNTSH 364 Query: 355 -------------QKDLLLDKKEPRHTNVSMGIES---------FIKKNRSQIESIDVLL 392 Q EP V+ +S F+ +RS+++ ID LL Sbjct: 365 QEITSEKAAAIAMQPGAPGAPPEPVPGGVASTGQSQDTDPSFNAFVTTSRSKLDEIDGLL 424 Query: 393 AEA 395 A+ Sbjct: 425 AQE 427 >gi|190890378|ref|YP_001976920.1| chemotaxis motility protein [Rhizobium etli CIAT 652] gi|190695657|gb|ACE89742.1| chemotaxis motility protein [Rhizobium etli CIAT 652] Length = 431 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 100/423 (23%), Positives = 185/423 (43%), Gaps = 30/423 (7%) Query: 3 QKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVK 62 Q + + + + + A + + PY+ +RSLQ D + GD S + ++ Sbjct: 5 QHRYLGFIALGLAMLSPAAGNAQDPDDLSPYKMLRSLQFVQDSVVAGDHSAGEMQRFMLG 64 Query: 63 ETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYF 122 +LR ++ D+RN+DA IY + + ++ LIA D GYFD + L+KY Sbjct: 65 TIDERLRTADTAIYDDDRNVDAALIYAMSGGNPQTLEYLIAHDVNGYFDNRVTDVLRKYL 124 Query: 123 SGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLE 182 SG+ +K L + + + I PYL L+ G ++ A+ +D RL +PGT +E Sbjct: 125 SGKGLLVAKTLEETAREYREKKIGPYLALIGGNVLIATKPTDALDLYDQARLAAPGTIVE 184 Query: 183 EIALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDI 241 E ALR + I + + ++ Y + Y +F HS Y F + ++ + + +D+ Sbjct: 185 EAALRRSVAICVDKGMLDKGLAYSQRYARRFLHSPYASQFADLFVKLVVAHDRDVKPQDV 244 Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENI 301 V +S QR +YL+IA+ + ISGK ++ +A+++++ + D Y + Sbjct: 245 VDILSLMDAPRQREVYLRIARAAAISGKPELARMAVERVQSLGAGTDNAFGPLADFYGGM 304 Query: 302 LNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHI------- 354 +P DI ++ I +L +D+ L+ A+ + +I ++ Sbjct: 305 AGLPTQDIDRAAKNVSGIDGNALSPRDQALQAAARSVAEQILRAPDPASLTQASDPNTSH 364 Query: 355 -------------QKDLLLDKKEPRHTNVSMGIES---------FIKKNRSQIESIDVLL 392 Q EP V+ +S F+ +RS+++ ID LL Sbjct: 365 QEITSEKAAAIAMQPGAPGAPPEPVPGGVASTGQSQDTDPSFNAFVTTSRSKLDEIDGLL 424 Query: 393 AEA 395 A+ Sbjct: 425 AQE 427 >gi|82940570|emb|CAJ44301.1| putative Chemotaxis precursor (Motility protein C MotC) [Rhizobium leguminosarum bv. viciae] Length = 334 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 88/330 (26%), Positives = 156/330 (47%), Gaps = 1/330 (0%) Query: 3 QKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVK 62 Q + + + + + A + + PY+ +RSLQ D + GD S + ++ Sbjct: 5 QHRYVGFVALGLAMLSPAAGNAQDPDDLAPYKMLRSLQFVQDSVVSGDHSAGEMQRFMLG 64 Query: 63 ETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYF 122 +LR F D+RN+DA IY + + ++ LIA D GYFD + L+KY Sbjct: 65 TIDERLRTVDPSTFDDDRNVDAALIYAMSGGNPQTLEYLIAHDVNGYFDNRVTDVLRKYL 124 Query: 123 SGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLE 182 SG+ +K L + + + I PYL L+ G ++ A+ +D RL +PGT +E Sbjct: 125 SGKGLLVAKTLEETAREYRDKKIGPYLALIGGNVLIATKPTDALDLYDQARLAAPGTIVE 184 Query: 183 EIALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDI 241 E ALR + I + + ++ Y + YV +F HS Y F + + + + +D+ Sbjct: 185 EAALRRSVAICVDKGMLDKGMAYSQRYVRRFLHSPYASQFADLFVTLVVGHDHDVKPQDV 244 Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENI 301 + +SF QR +YL+IA+ + ISGK ++ +A+ +++ + D LY + Sbjct: 245 IDILSFMDAPRQREVYLRIARAAAISGKPELARMAVGRVQSLGAATDNAFGPLADLYGGM 304 Query: 302 LNIPFVDIMSLQRSTCNIPYYSLMEQDRYL 331 +P DI ++ I +L +D+ L Sbjct: 305 AGLPTEDIDRAAKNVSGIDGNTLSPRDQAL 334 >gi|218680024|ref|ZP_03527921.1| chemotaxis protein [Rhizobium etli CIAT 894] Length = 357 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 90/347 (25%), Positives = 164/347 (47%), Gaps = 1/347 (0%) Query: 3 QKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVK 62 Q + + + + + + PY+ +RSLQ D + GD S + ++ Sbjct: 11 QHRYVGFVALGLAMLSPATGKAQDPDDLAPYKMLRSLQFVQDSVVGGDHSAGEMQRFMLG 70 Query: 63 ETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYF 122 +LR VF D+RN+DA IY + + ++ LIA D GYFD + L+KY Sbjct: 71 TIDQRLRTVETSVFEDDRNVDAALIYAMSGGNPQTLEYLIAHDVNGYFDNRVTDVLRKYL 130 Query: 123 SGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLE 182 SG+ +K L ++ + + I PYL L+ G ++ A+ +D RL +PGT +E Sbjct: 131 SGKGLLVAKTLEEMAREYRDKKIGPYLALIGGNVLIATKPTDALDLYDQARLAAPGTIVE 190 Query: 183 EIALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDI 241 E ALR + I + + ++ Y + YV +F HS Y F + + + + +D+ Sbjct: 191 EAALRRSVAICVDKGLLDKGMAYSQRYVRRFLHSPYASQFADLFVALVVGHDHDVKPQDV 250 Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENI 301 V +SF QR +YL+IA+ + ISGK + +A+++++ + D Y + Sbjct: 251 VDILSFMDAPRQREVYLRIARAAAISGKPDLAHMAVERVQSLGAGTDNAFGPLADFYGGM 310 Query: 302 LNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLID 348 +P DI ++ I +L +D+ L+ A++ + +I ++ Sbjct: 311 AGLPTEDIDRAAKNVSGIAGNALSPRDQALQAAAQSVAEQILRAPDP 357 >gi|27763657|gb|AAO20255.1| MotC [Agrobacterium sp. H13-3] Length = 425 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 99/397 (24%), Positives = 174/397 (43%), Gaps = 24/397 (6%) Query: 20 FATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDN 79 FA QD ++PY +RSLQ D GD S + +++ +L++ +F D Sbjct: 28 FAQSQD---NLMPYAMLRSLQFVQDSVTMGDHSATEMQRFLLQTIDERLKSAPSAIFKDP 84 Query: 80 RNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDK 139 RN+DA +Y + + + ++ L+A+D G FD + L+KY SG+ ++ ++ + + Sbjct: 85 RNVDAALVYAMSGGNPATLELLVARDVDGNFDSRVADILRKYLSGKGTLVAQSIAAMVPE 144 Query: 140 DNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQ-NEVG 198 I YL L+ G +P A+ F+D RL +PGT +EE ALR L I + Sbjct: 145 YRGTRIGAYLALIGGNVTIPRDPVAALGFYDIARLEAPGTIVEEAALRRSLAIAVEDGDA 204 Query: 199 ERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYL 258 R Y + Y +F HS Y F +L+ + + + I T + E Q+ YL Sbjct: 205 GRGVEYAQRYARRFLHSPYASQFADLLVSLVVKRVDSIGHDTIEETFAMMDAERQKEAYL 264 Query: 259 KIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCN 318 ++++ + ISGK + +A + K + + + LYE++ NI D++S + Sbjct: 265 RLSRLAAISGKDSLARMAALKAKALSPDMPDQPQVQANLYESLSNIGTPDVVSAIETIGQ 324 Query: 319 IPYYSLMEQDRYLKKASEIIMSEIGKSLID-----IDFEHIQKDLLLDKKEPRHTNVSMG 373 IP L ++DR L+ A+ I ++ + Q + + G Sbjct: 325 IPEAQLSDRDRALRDAARAIADQVVRPPSPQPGADPGVTAGQGAGSGAPANEAASAETKG 384 Query: 374 I---------------ESFIKKNRSQIESIDVLLAEA 395 I + RS+++ ID LL + Sbjct: 385 IWRVENHKAEDEGENVRQLVTSGRSKLDEIDSLLKKG 421 >gi|325291957|ref|YP_004277821.1| Chemotaxis protein motC [Agrobacterium sp. H13-3] gi|325059810|gb|ADY63501.1| Chemotaxis protein motC [Agrobacterium sp. H13-3] Length = 423 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 99/397 (24%), Positives = 174/397 (43%), Gaps = 24/397 (6%) Query: 20 FATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDN 79 FA QD ++PY +RSLQ D GD S + +++ +L++ +F D Sbjct: 26 FAQSQD---NLMPYAMLRSLQFVQDSVTMGDHSATEMQRFLLQTIDERLKSAPSAIFKDP 82 Query: 80 RNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDK 139 RN+DA +Y + + + ++ L+A+D G FD + L+KY SG+ ++ ++ + + Sbjct: 83 RNVDAALVYAMSGGNPATLELLVARDVDGNFDSRVADILRKYLSGKGTLVAQSIAAMVPE 142 Query: 140 DNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQ-NEVG 198 I YL L+ G +P A+ F+D RL +PGT +EE ALR L I + Sbjct: 143 YRGTRIGAYLALIGGNVTIPRDPVAALGFYDIARLEAPGTIVEEAALRRSLAIAVEDGDA 202 Query: 199 ERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYL 258 R Y + Y +F HS Y F +L+ + + + I T + E Q+ YL Sbjct: 203 GRGVEYAQRYARRFLHSPYASQFADLLVSLVVKRVDSIGHDTIEETFAMMDAERQKEAYL 262 Query: 259 KIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCN 318 ++++ + ISGK + +A + K + + + LYE++ NI D++S + Sbjct: 263 RLSRLAAISGKDSLARMAALKAKALSPDMPDQPQVQANLYESLSNIGTPDVVSAIETIGQ 322 Query: 319 IPYYSLMEQDRYLKKASEIIMSEIGKSLID-----IDFEHIQKDLLLDKKEPRHTNVSMG 373 IP L ++DR L+ A+ I ++ + Q + + G Sbjct: 323 IPEAQLSDRDRALRDAARAIADQVVRPPSPQPGADPGVTAGQGAGSGAPANEAASAETKG 382 Query: 374 I---------------ESFIKKNRSQIESIDVLLAEA 395 I + RS+++ ID LL + Sbjct: 383 IWRVENHKAEDEGENVRQLVTSGRSKLDEIDSLLKKG 419 >gi|222084881|ref|YP_002543410.1| chemotaxis motility protein [Agrobacterium radiobacter K84] gi|221722329|gb|ACM25485.1| chemotaxis motility protein [Agrobacterium radiobacter K84] Length = 433 Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 99/429 (23%), Positives = 186/429 (43%), Gaps = 35/429 (8%) Query: 3 QKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVK 62 Q + + + + + PY+ +RSL+ D + GD S + ++ Sbjct: 5 QHRHRLALAFTLGMLMPGGLRAESQDGLPPYKILRSLEFIQDSVVAGDSSAGEMQRFMLS 64 Query: 63 ETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYF 122 +LR VF D+RN+DA IY + + ++ L+++D G FD + L+KY Sbjct: 65 TIDERLRNADKSVFDDSRNVDAALIYAMSGGNPDTLEYLMSRDVNGNFDNRVADVLRKYL 124 Query: 123 SGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLE 182 +G+ L+ I + + I PYL L+ M + ++A+ +D+ RL SPGT +E Sbjct: 125 NGKGLLVVNTLADIAREYRDKKIGPYLSLVAANVMSAKNPKEALKLYDWARLASPGTIVE 184 Query: 183 EIALRNLLEI-TQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDI 241 E ALR L + + + GY Y +F HS Y F + ++ + + +DI Sbjct: 185 ESALRRSLALSADAGMVPQGLGYAARYTRRFLHSPYASQFADLFVQLVVDHDADVKQQDI 244 Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENI 301 + +SF QR +YL++A+ + I+GK + LA + + I + A Y + Sbjct: 245 IDILSFMDPPRQREVYLRMARRAAIAGKADLAALASGRAQAITNDGSDAFSALAGFYGGV 304 Query: 302 LNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDID----------- 350 + ++ + R +P L +QDR L++A+ ++ EI ++ Sbjct: 305 AGVSTPNMGTAIRKIDQMPAGELNQQDRALREAARLVADEILRAPDPTSLKQGSPLNLLN 364 Query: 351 FEHIQKDLLLDKKEPRHTNVSMGIE-----------------------SFIKKNRSQIES 387 EH + D + + + + G+E +F+ +RS++++ Sbjct: 365 QEHTEHDAAVTNQSGAQSPGTAGVEAGAAVNAAHTPEEGRQEADPSFNAFVTTSRSKLDA 424 Query: 388 IDVLLAEAR 396 ID LL + Sbjct: 425 IDGLLKAGK 433 >gi|15887915|ref|NP_353596.1| chemotaxis protein [Agrobacterium tumefaciens str. C58] gi|15155509|gb|AAK86381.1| Chemotaxis protein [Agrobacterium tumefaciens str. C58] Length = 426 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 97/399 (24%), Positives = 175/399 (43%), Gaps = 25/399 (6%) Query: 19 SFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVD 78 +F+ QD ++PY +RSLQ D GD S + +++ +L++ +F D Sbjct: 27 AFSQSQD---NLMPYAMLRSLQFVQDSVAMGDHSASEMQRFLLQTIDERLKSAPSAIFKD 83 Query: 79 NRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKD 138 RN+DA IY + + + ++ L+A+D G FD + L+KY SG+ ++ ++ + Sbjct: 84 PRNVDAALIYAMSGGNPATLELLVARDVDGNFDSRVADILRKYLSGKGTLVAQSIAAMVP 143 Query: 139 KDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQ-NEV 197 + I YL L+ G +P A+ F+D RL +PGT +EE ALR L I + Sbjct: 144 EYRGTRIGAYLALIGGNVTIPRDPLAALTFYDIARLEAPGTIVEEAALRRSLAIAVEDGD 203 Query: 198 GERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIY 257 + Y + Y +F HS Y F +L+ + + +E I T + E Q+ Y Sbjct: 204 ATKGVDYAQRYARRFLHSPYASQFADLLVSLVVKRADSIGEEAIQETFAMMDAERQKEAY 263 Query: 258 LKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTC 317 L++++ + ISGK + +A + K + L LYE++ NI D++S + Sbjct: 264 LRLSRLAAISGKDSLARMAAVKAKTLSPALPGTPEVQANLYESLSNIGTPDVVSAIEAIG 323 Query: 318 NIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKK-------------- 363 IP L ++DR L+ A+ I ++ + + + Sbjct: 324 QIPEAQLSDRDRALRDAARAIADQVVRPPSAETGVEAKAAATNEPGGTAPAKEAAVAADT 383 Query: 364 -------EPRHTNVSMGIESFIKKNRSQIESIDVLLAEA 395 + + + + RS+++ ID LL + Sbjct: 384 KSIWRVETQKADDAGENVRQLVTSGRSKLDEIDSLLKKG 422 >gi|227820871|ref|YP_002824841.1| chemotaxis protein [Sinorhizobium fredii NGR234] gi|227339870|gb|ACP24088.1| chemotaxis protein motility protein C [Sinorhizobium fredii NGR234] Length = 435 Score = 362 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 97/427 (22%), Positives = 181/427 (42%), Gaps = 38/427 (8%) Query: 6 LICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETG 65 ++ T ++A+ + A + + P++ VRSLQ D + GD S + ++ + Sbjct: 8 ILATSVLAVPLAIGLARASE-TEELAPFKMVRSLQYVQDSVVLGDHSAIEMQRFMLNKID 66 Query: 66 VQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQ 125 +LRA +F D RN+DA +Y + + +D L +D +G FD + AL++Y G+ Sbjct: 67 KRLRAADEAIFRDPRNVDAALVYVMSGGNPETLDYLTDRDVEGNFDARVAEALRQYLRGK 126 Query: 126 LEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIA 185 + L+K + + PYL L++G A A+ ++D+ RLT+PGT +EE A Sbjct: 127 GPLIVENLAKAAPEYKNSRVGPYLFLILGNATSQQDPVAAMKYYDWARLTAPGTIIEEAA 186 Query: 186 LRNLLEIT-QNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFT 244 LR + + Q E+ F Y Y ++ S Y F V + + + ++ + Sbjct: 187 LRRSVSLAVQAGDPEKGFRYALNYARRYLTSPYASQFADVFVELAVTHFDETVEKRVAEI 246 Query: 245 ISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNI 304 ++F QR +YL++A+ + I G + + LA + + + + Y+ + + Sbjct: 247 LAFMDQSRQREVYLRVARRAAIGGNQTLARLASSRAEELALDGGGQSQLLASFYDGLAAV 306 Query: 305 PFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEH----------- 353 P D+ + ++ IP L +DR L++A+ I E+ + D Sbjct: 307 PSEDVFTAAQTLAAIPDGKLSRRDRALREAARAIAEEVVRLPRDESSAQASMPIPEANTG 366 Query: 354 -----------------------IQKDLLLDKKEPRHTNVSMGI--ESFIKKNRSQIESI 388 ++ T + + F+ RS+I+ I Sbjct: 367 PAKDGGETGETGSGMSPFAVASDRPPAPGGERPASAETAAASDPALDGFVANGRSKIKEI 426 Query: 389 DVLLAEA 395 D LLAE Sbjct: 427 DALLAEE 433 >gi|222147585|ref|YP_002548542.1| chemotaxis protein [Agrobacterium vitis S4] gi|221734573|gb|ACM35536.1| Chemotaxis protein [Agrobacterium vitis S4] Length = 483 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 99/417 (23%), Positives = 164/417 (39%), Gaps = 42/417 (10%) Query: 18 FSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFV 77 A + PY +RSLQ D +RGD S ++ +LR F Sbjct: 62 VGSAAVGGDSDNLPPYLMLRSLQFVQDSVVRGDHSAADMQRFLLTRIDKRLRTAAPSDFE 121 Query: 78 DNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIK 137 D RN+DA IYT+ + + +D L+A+D G+FD + L+KY SG+ + L ++ Sbjct: 122 DPRNVDAALIYTMSGGNPATLDYLVARDVDGHFDNRVSDMLRKYLSGKGVLVASSLGEMV 181 Query: 138 DKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-E 196 + PY+ L+ G + A+ FFD RL +PGT +EE ALR +I + Sbjct: 182 PLYQNGRVGPYIALVAGNVTLVKDPAGALKFFDIARLVAPGTIVEEAALRRSFQIAMDTG 241 Query: 197 VGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAI 256 RA Y Y +F +S Y F +L++ + +L DI+ T++ + QR + Sbjct: 242 QNGRAMAYANRYARRFLYSPYASQFADLLVQLVVDHFSELDKNDILATLATMDPDRQREV 301 Query: 257 YLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRST 316 YL+IA+ + I+G + + LA Q + + L K+ LY I D+ + + Sbjct: 302 YLRIARRATINGNQALASLASSQAQSLA-GLPDKNDPQALLYGGAALISTTDVKNALNTI 360 Query: 317 CNIPYYSLMEQDRYLKKASEIIMSEI---------------------------------- 342 +P L D L +A+ + EI Sbjct: 361 SQLPKDQLSASDNALLEAARAVAQEIITLPTAPQSPSASPSTPPPSGDNTAPESVANVSD 420 Query: 343 -GKSLIDIDFEHIQKDLLLDKK-----EPRHTNVSMGIESFIKKNRSQIESIDVLLA 393 + + ++F+ RS++E ID +L Sbjct: 421 QQDPGVPAKATAMPDAGSGTAPVTPASADAKQKPDPEFQTFMSGGRSKLEEIDKMLK 477 >gi|150395499|ref|YP_001325966.1| chemotaxis protein [Sinorhizobium medicae WSM419] gi|150027014|gb|ABR59131.1| chemotaxis precursor (motility protein C) transmembrane [Sinorhizobium medicae WSM419] Length = 433 Score = 355 bits (911), Expect = 8e-96, Method: Composition-based stats. Identities = 102/423 (24%), Positives = 181/423 (42%), Gaps = 36/423 (8%) Query: 6 LICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETG 65 + ++A+ + A + P++ +RSLQ D + GD S + ++ Sbjct: 8 IFAASVLAVPLALGPARAS-GTEELAPFKMIRSLQYVQDSVVLGDHSAIEMQRFMLGAID 66 Query: 66 VQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQ 125 +LRA F D RN+DA +Y + + + +D L +D +G FD + AL++Y +G+ Sbjct: 67 ERLRAADPSAFRDPRNVDAALVYVMSGGNPATLDLLADRDIEGNFDSRVTDALRQYLNGK 126 Query: 126 LEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIA 185 + L+K + I PYL L++G AM +A+ +D+ RLT+PGT +EE A Sbjct: 127 GPLIVENLTKAAPEYKNSRIGPYLFLILGNAMSQQDPIEAMKHYDWARLTAPGTIIEEAA 186 Query: 186 LRNLLEIT-QNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFT 244 LR + + Q + E+ F Y Y ++ S Y F V + + + D + Sbjct: 187 LRRSVSLAAQAGLPEKGFRYALNYARRYLTSPYASQFADVFVELAVAHFDESADGRVSEI 246 Query: 245 ISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNI 304 +SF QR +YL++A+ + I+G + + +A K+ + ++ + YE + + Sbjct: 247 LSFMDSARQREVYLRVARRAAIAGNQALARVASKRAEELVGDDGSRSQMLASFYEGLAAV 306 Query: 305 PFVDIMSLQRSTCNIPYYSLMEQDRYLKKASE----------IIMSEIGKSLIDIDFEHI 354 P D+ S + IP L +DR L++A+ I S + Sbjct: 307 PSADVFSAAEALAAIPDDKLSPRDRALREAARAVADAVVRPPAIESLAQAPFPIAERRPG 366 Query: 355 QKDLLLDK------------------------KEPRHTNVSMGIESFIKKNRSQIESIDV 390 Q+D + + E + I+ F+ RS+IE ID Sbjct: 367 QEDGVAAEEDGSGMSPFGQPVEESPSRPSEMTAEADAASGDPAIDGFLASGRSKIEEIDA 426 Query: 391 LLA 393 LL Sbjct: 427 LLK 429 >gi|2275157|gb|AAB81409.1| MotC [Sinorhizobium meliloti] Length = 434 Score = 352 bits (902), Expect = 8e-95, Method: Composition-based stats. Identities = 96/406 (23%), Positives = 169/406 (41%), Gaps = 36/406 (8%) Query: 26 LVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAV 85 + PY+ +RSLQ D + GD S + ++ +LRA F D RN+DA Sbjct: 27 GTEELTPYKMIRSLQYVQDSVVLGDHSAIEMQRFMLGAIDERLRAADPSAFRDPRNVDAA 86 Query: 86 WIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGI 145 +Y + + + +D L +D +G FD + AL++Y +G+ + L+K + I Sbjct: 87 LVYVMSGGNPATLDLLADRDIEGNFDSRVTDALRQYLNGKGPLIVENLTKAAPEYKNSRI 146 Query: 146 VPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQ-NEVGERAFGY 204 PYL L++G AM +A+ +D+ RLT+PGT +EE ALR + + + E+ F Y Sbjct: 147 GPYLFLILGNAMSQQDPIEAMKHYDWARLTAPGTIIEEAALRRSVSLAAGAGLPEKGFRY 206 Query: 205 IRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNS 264 Y ++ S Y F V + + + D + +SF QR +YL++A+ + Sbjct: 207 ALNYARRYLTSPYASQFADVFVELAVAHFDEAADGRVSEILSFMDSARQREVYLRVARRA 266 Query: 265 VISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSL 324 I+G + + LA ++ + + + YE + +P D+ S + IP L Sbjct: 267 AIAGNQALARLASRRAEELAGDDSSRSQVLASFYEGLAAVPSADVFSAAEALEAIPDEKL 326 Query: 325 MEQDRYLKKA-----------------SEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRH 367 +DR L++A ++ + + ++ + Sbjct: 327 SPRDRALREAAKAVADAVVRPPFGESPAQAPAPIAERPAGEQSELAAEESGSGMSPFGQP 386 Query: 368 TNVSMGIES------------------FIKKNRSQIESIDVLLAEA 395 S G S F+ RS+I+ ID LL Sbjct: 387 VEASPGRPSEMTAEADAAASDDPALDGFLASGRSKIDEIDALLKRE 432 >gi|307318925|ref|ZP_07598356.1| chemotaxis protein [Sinorhizobium meliloti AK83] gi|306895339|gb|EFN26094.1| chemotaxis protein [Sinorhizobium meliloti AK83] Length = 434 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 96/406 (23%), Positives = 171/406 (42%), Gaps = 36/406 (8%) Query: 24 QDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNID 83 + + PY+ +RSLQ D + GD S + ++ +LRA F D RN+D Sbjct: 25 ANGTEELTPYKMIRSLQYVQDSVVLGDHSAIEMQRFMLGAIDERLRAADPSAFRDPRNVD 84 Query: 84 AVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTR 143 A +Y + + + +D L +D +G FD + AL++Y +G+ + L+K + Sbjct: 85 AALVYVMSGGNPATLDLLADRDIEGNFDSRVTDALRQYLNGKGPLIVENLTKAAPEYKNS 144 Query: 144 GIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEIT-QNEVGERAF 202 I PYL L++G AM +A+ +D+ RLT+PGT +EE ALR + + Q + E+ F Sbjct: 145 RIGPYLFLILGNAMSQQDPIEAMKHYDWARLTAPGTIIEEAALRRSVSLAAQAGLPEKGF 204 Query: 203 GYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQ 262 Y Y ++ S Y F V + + + D + +SF QR +YL++A+ Sbjct: 205 RYALNYARRYLTSPYASQFADVFVELAVAHFDEAADGRVSEILSFMDSARQREVYLRVAR 264 Query: 263 NSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYY 322 + I+G + + LA ++ + + + YE + +P D+ S + IP Sbjct: 265 RAAIAGNQALARLASRRAEELAGDDSSRSQVLASFYEGLAAVPSADVFSAAEALEAIPDE 324 Query: 323 SLMEQDRYLKKA-----------------SEIIMSEIGKSLIDIDFEHIQKDLLLDKKEP 365 L +DR L++A ++ + + ++ Sbjct: 325 KLSPRDRALREAAKAVADAVVRPPLGESPAQAPAPIAERPAGEQSELAAEESGSGMSPFG 384 Query: 366 RHTNVSMGI------------------ESFIKKNRSQIESIDVLLA 393 + S G + F+ RS+I+ ID LL Sbjct: 385 QPVEASPGRPSEMTAEADVAASDDPALDGFLASGRSKIDEIDALLK 430 >gi|307311570|ref|ZP_07591211.1| chemotaxis protein [Sinorhizobium meliloti BL225C] gi|306899587|gb|EFN30216.1| chemotaxis protein [Sinorhizobium meliloti BL225C] Length = 434 Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 96/406 (23%), Positives = 171/406 (42%), Gaps = 36/406 (8%) Query: 24 QDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNID 83 + + PY+ +RSLQ D + GD S + ++ +LRA F D RN+D Sbjct: 25 ANGTEELTPYKMIRSLQYVQDSVVLGDHSAIEMQRFMLGAIDERLRAADHSAFRDPRNVD 84 Query: 84 AVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTR 143 A +Y + + + +D L +D +G FD + AL++Y +G+ + L+K + Sbjct: 85 AALVYVMSGGNPATLDLLADRDIEGNFDSRVTDALRQYLNGKGPLIVENLTKAAPEYKNS 144 Query: 144 GIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEIT-QNEVGERAF 202 I PYL L++G AM +A+ +D+ RLT+PGT +EE ALR + + Q + E+ F Sbjct: 145 RIGPYLFLILGNAMSQQDPIEAMKHYDWARLTAPGTIIEEAALRRSVSLAAQAGLPEKGF 204 Query: 203 GYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQ 262 Y Y ++ S Y F V + + + D + +SF QR +YL++A+ Sbjct: 205 RYALNYARRYLTSPYASQFADVFVELAVAHFDEAADGRVSEILSFMDSARQREVYLRVAR 264 Query: 263 NSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYY 322 + I+G + + LA ++ + + + YE + +P D+ S + IP Sbjct: 265 RAAIAGNQALARLASRRAEELAGDDSSRSQVLASFYEGLAAVPSADVFSAAEALEAIPDE 324 Query: 323 SLMEQDRYLKKA-----------------SEIIMSEIGKSLIDIDFEHIQKDLLLDKKEP 365 L +DR L++A ++ + + ++ Sbjct: 325 KLSPRDRALREAAKAVADAVVRPPLGESPAQAPAPIAERPAGEQSELAAEESGSGMSPFG 384 Query: 366 RHTNVSMGI------------------ESFIKKNRSQIESIDVLLA 393 + S G + F+ RS+I+ ID LL Sbjct: 385 QPVEASPGRPSEMTAEADVAASDDPALDGFLASGRSKIDEIDALLK 430 >gi|15964428|ref|NP_384781.1| chemotaxis protein [Sinorhizobium meliloti 1021] gi|17380484|sp|Q52963|MOTC_RHIME RecName: Full=Chemotaxis protein motC; AltName: Full=Motility protein C; Flags: Precursor gi|15073605|emb|CAC45247.1| Chemotaxis precursor (motility protein C) transmembrane [Sinorhizobium meliloti 1021] Length = 434 Score = 345 bits (885), Expect = 8e-93, Method: Composition-based stats. Identities = 95/406 (23%), Positives = 171/406 (42%), Gaps = 36/406 (8%) Query: 24 QDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNID 83 + + PY+ +RSLQ D + GD S + ++ +LRA F D RN+D Sbjct: 25 ANGTEELTPYKMIRSLQYVQDSVVLGDHSAIEMQRFMLGAIDERLRAADHSAFRDPRNVD 84 Query: 84 AVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTR 143 A +Y + + + +D L +D +G FD + AL++Y +G+ + L+K + Sbjct: 85 AALVYVMSGGNPATLDLLADRDIEGNFDSRVTDALRQYLNGKGPLIVENLTKAAPEYKNS 144 Query: 144 GIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEIT-QNEVGERAF 202 I PYL L++G AM +A+ +D+ RLT+PGT +EE ALR + + Q + E+ F Sbjct: 145 RIGPYLFLILGNAMSQQDPIEAMKHYDWARLTAPGTIIEEAALRRSVSLAAQAGLPEKGF 204 Query: 203 GYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQ 262 Y Y ++ S + F V + + + D + +SF QR +YL++A+ Sbjct: 205 RYALNYARRYLTSPFASQFADVFVELAVAHFDEAADGRVSEILSFMDSARQREVYLRVAR 264 Query: 263 NSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYY 322 + I+G + + LA ++ + + + YE + +P D+ S + IP Sbjct: 265 RAAIAGNQALARLASRRAEELAGDDSSRSQVLASFYEGLAAVPSADVFSAAEALEAIPDE 324 Query: 323 SLMEQDRYLKKA-----------------SEIIMSEIGKSLIDIDFEHIQKDLLLDKKEP 365 L +DR L++A ++ + + ++ Sbjct: 325 KLSPRDRALREAAKAVADAVVRPPLGESPAQAPAPIAERPAGEQSELAAEESGSGMSPFG 384 Query: 366 RHTNVSMGI------------------ESFIKKNRSQIESIDVLLA 393 + S G + F+ RS+I+ ID LL Sbjct: 385 QPVEASPGRPSEMTAEADVAASDDPALDGFLASGRSKIDEIDALLK 430 >gi|163758027|ref|ZP_02165115.1| chemotaxis motility protein [Hoeflea phototrophica DFL-43] gi|162284316|gb|EDQ34599.1| chemotaxis motility protein [Hoeflea phototrophica DFL-43] Length = 566 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 91/351 (25%), Positives = 160/351 (45%), Gaps = 1/351 (0%) Query: 26 LVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAV 85 + + PY+ +RSLQ D + GD S + ++ +LRA VF D RN+DA Sbjct: 161 DLDGLEPYKLIRSLQYVQDAVVLGDHSAMEMQRFLLGVIDSRLRAADQSVFDDPRNVDAA 220 Query: 86 WIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGI 145 IY + + ++ L +D G FD I L+ Y +G+ ++ L+++ I Sbjct: 221 LIYAMSGGNPETLEILALQDKFGNFDNEITTVLRAYLNGRAAKTQTTLAEVVAIYRDSRI 280 Query: 146 VPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQNE-VGERAFGY 204 PYL L+ + A+ FD+ RLT+PGT +EE ALR L I + + + A Y Sbjct: 281 GPYLTLIAANVTAALNDPAALELFDWARLTAPGTLVEEAALRRSLFIAAAQNMVDEALEY 340 Query: 205 IRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNS 264 + Y +F +S Y + +L+ + K+ D+ + ++F +R +YL+IA+ + Sbjct: 341 AQLYARRFINSPYAGQYADLLVDLVVLNYEKVGDDQLNAILTFMDRPRKREVYLRIARKA 400 Query: 265 VISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSL 324 VISG R + A + + + D LA LY + +P + ++ + L Sbjct: 401 VISGLRDLAVFASGKAEELASPEDRIPLALADLYAGMAKVPTDGVDAVLEELNAVSERQL 460 Query: 325 MEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIE 375 +DR L+ A++I+ +E+ + +L + P GI Sbjct: 461 SPRDRALRTAAQIVAAEVIRKPDPNSLTQAFSPMLNEPNAPEQDADLTGIA 511 >gi|153011512|ref|YP_001372726.1| chemotaxis protein [Ochrobactrum anthropi ATCC 49188] gi|151563400|gb|ABS16897.1| conserved hypothetical MotC chemotaxis protein [Ochrobactrum anthropi ATCC 49188] Length = 431 Score = 333 bits (854), Expect = 3e-89, Method: Composition-based stats. Identities = 88/418 (21%), Positives = 160/418 (38%), Gaps = 30/418 (7%) Query: 7 ICTMMVAMDVFFSFATDQDLVRT-----IVPYQCVRSLQRALDEAMRGDISLQKKIPDIV 61 + + + + +F+ Q L T + PY+ VRSL+ D+ + G + ++ Sbjct: 13 VAGLSLMGAAYPAFSQMQTLAETRALPVLEPYKLVRSLRMLQDQVVAGKPEAVVMLNKLL 72 Query: 62 KETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKY 121 + DV+ + N+ A IY + V ++A +V Y Sbjct: 73 GFVSADMGRASNDVWSNPENVYAAIIYLFNGGNPEAVRKVLADLKTDAVPPELVKGALAY 132 Query: 122 FSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFL 181 SGQ E K S D + + L+ M F A+ D VRL +PGT Sbjct: 133 ASGQTIEVVKLFSVPLSPDVPAELKASIVLVTASQMTAFDPATALMRLDQVRLDAPGTLF 192 Query: 182 EEIALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDED 240 EE A+R + I ++ R Y+ +F S Y F++ + + ++ + + Sbjct: 193 EEAAIRRSMPIAAKLGDADKIRLLSRNYLQRFPRSPYMRDFMAQFVDAAVKLNDRIGNAE 252 Query: 241 IVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYEN 300 + I Q ++YL+IA+ +++ G+ + + K++ DRL D LY Sbjct: 253 LAKLIGSADPVMQYSLYLQIARGALVDGQTERARFMSAEAKKLADRLK-ADPTRANLYAA 311 Query: 301 ILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSL---IDIDFEHIQKD 357 ++ S R I L E+DR L KA+E + + + ++ ++D Sbjct: 312 ASDVASDSAGSALRELSQISPDKLQERDRKLLKAAEAVGTVVTRTPDALPPAKPALTERD 371 Query: 358 LL-----------LDKKEPRHTNVSMGI---------ESFIKKNRSQIESIDVLLAEA 395 + K EP VSM + ++ R ++ ID LL + Sbjct: 372 VPPMAVADSQEHEAVKPEPTPAGVSMKPVKNQPEDDLQKTMEDARRKLAEIDALLGKT 429 >gi|306841272|ref|ZP_07473983.1| chemotaxis protein [Brucella sp. BO2] gi|306288674|gb|EFM60005.1| chemotaxis protein [Brucella sp. BO2] Length = 420 Score = 328 bits (842), Expect = 8e-88, Method: Composition-based stats. Identities = 83/390 (21%), Positives = 144/390 (36%), Gaps = 25/390 (6%) Query: 30 IVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYT 89 + PY+ VRSL+ D+ + G + ++ + +V+ NI A IY Sbjct: 30 LEPYKLVRSLRMLQDQVVAGKPEAVVMLNKLLGFVSTDMSRAQPEVWDKPENIYAAIIYL 89 Query: 90 IISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYL 149 + V ++A +V Y SGQ E K S D + + Sbjct: 90 FNGGNPEAVRKVLANLKTDTVPQELVKGALAYASGQTIEVVKLFSVPLAPDVPAELKASI 149 Query: 150 HLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGYIRAY 208 L+ MM F A+ D VRL +PGT EE A+R L I ++ R Y Sbjct: 150 VLVTANQMMAFDPATALLRLDQVRLEAPGTLFEEAAIRRSLPIAAKLGDADKVRLLSRNY 209 Query: 209 VTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISG 268 + +F HS Y F++ + L ++ +E++V I Q +YL+IA+ +++ G Sbjct: 210 LQRFRHSPYMRDFMAQFVDTTLKLSDRIGNEELVKLIGSADPLLQYTLYLQIARGALVDG 269 Query: 269 KRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQD 328 + + + +++ L D LY ++ S R I L E D Sbjct: 270 QTERARFMSAEARKLAGHL-NADPTRANLYAAASDVVSDSAGSALRELSQISPDHLQEPD 328 Query: 329 RYLKKASEIIMSEIGKSL------------------IDIDFEHIQKDLLLDKKEPRHTNV 370 R L KA+E + + + ++ D L N Sbjct: 329 RKLLKAAETVGAIVTRAPDTTPPAKRSADEREVPRMAVADAPQQPAQQALSAPVEVDFNS 388 Query: 371 S-----MGIESFIKKNRSQIESIDVLLAEA 395 + ++ ++ R ++ ID LL + Sbjct: 389 ARTRSEADLQKTMENARRKLAEIDALLGKT 418 >gi|306845423|ref|ZP_07477997.1| chemotaxis protein [Brucella sp. BO1] gi|306274166|gb|EFM55982.1| chemotaxis protein [Brucella sp. BO1] Length = 430 Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats. Identities = 83/390 (21%), Positives = 145/390 (37%), Gaps = 25/390 (6%) Query: 30 IVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYT 89 + PY+ VRSL+ D+ + G + ++ + +V+ NI A IY Sbjct: 40 LEPYKLVRSLRMLQDQVVAGKPEAVVMLNKLLGFVSTDMSRAQPEVWDKPENIYAAIIYL 99 Query: 90 IISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYL 149 + V ++A +V Y SGQ E K S D + + Sbjct: 100 FNGGNPEAVRKVLANLKSDTVPQELVKGALAYASGQTIEVVKLFSVPLAPDVPAELKASI 159 Query: 150 HLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGYIRAY 208 L+ MM F A+ D VRL +PGT EE A+R L I ++ R Y Sbjct: 160 VLVTANQMMAFDPATALLRLDQVRLEAPGTLFEEAAIRRSLPIAAKLGDADKVRLLSRNY 219 Query: 209 VTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISG 268 + +F HS Y F++ + L ++ +E++V I Q +YL+IA+ +++ G Sbjct: 220 LQRFRHSPYMRDFMAQFVDTTLKLSDRIGNEELVKLIGSADPLLQYTLYLQIARGALVDG 279 Query: 269 KRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQD 328 + + + +++ L D LY ++ S R I L E D Sbjct: 280 QTERARFMSAEARKLAGHL-NADPTRANLYAAASDVASDSAGSALRELSQISPDHLQEPD 338 Query: 329 RYLKKASEIIMSEIGKSL------------------IDIDFEHIQKDLLLDKKEPRHTNV 370 R L KA+E + + + ++ D + L N Sbjct: 339 RKLLKAAETVGAIVTRAPDTTPPAKRSADEREVPRMAVADAPQLPAQQALSAPVEVDFNS 398 Query: 371 S-----MGIESFIKKNRSQIESIDVLLAEA 395 + ++ ++ R ++ ID LL + Sbjct: 399 ARTRSEADLQKTMENARRKLAEIDALLGKT 428 >gi|161511179|ref|NP_541132.2| chemotaxis protein [Brucella melitensis bv. 1 str. 16M] gi|256042870|ref|ZP_05445816.1| chemotaxis protein [Brucella melitensis bv. 1 str. Rev.1] gi|260564107|ref|ZP_05834592.1| chemotaxis motc protein [Brucella melitensis bv. 1 str. 16M] gi|265989305|ref|ZP_06101862.1| chemotaxis protein [Brucella melitensis bv. 1 str. Rev.1] gi|260151750|gb|EEW86843.1| chemotaxis motc protein [Brucella melitensis bv. 1 str. 16M] gi|262999974|gb|EEZ12664.1| chemotaxis protein [Brucella melitensis bv. 1 str. Rev.1] Length = 430 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 86/410 (20%), Positives = 151/410 (36%), Gaps = 28/410 (6%) Query: 13 AMDVFFSFATDQDLVRTI---VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLR 69 + + A Q +R + PY+ VRSL+ D+ + G + ++ + Sbjct: 20 GVAGGTACARAQPEMRPLPVLEPYKLVRSLRMLQDQVVAGKPEAVVMLNKLLGFVSTDMS 79 Query: 70 ATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEES 129 +V+ NI A IY + V ++A +V Y SGQ E Sbjct: 80 RAQPEVWDKPENIYAAIIYLFNGGNPEAVRKVLANLKTDTVPQELVKGALAYASGQTIEV 139 Query: 130 SKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNL 189 K S + + + L+ MM F A+ D VRL +PGT EE A+R Sbjct: 140 VKLFSVPLAPEVPAELKASIVLVTANQMMAFDPATALLRLDQVRLEAPGTLFEEAAIRRS 199 Query: 190 LEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFF 248 L I ++ R Y+ +F HS Y F++ + L ++ DE++V I Sbjct: 200 LPIAAKRGAADKVRLLSRNYLQRFRHSPYMRDFMAQFVDTTLKLSDRIGDEELVKLIGSA 259 Query: 249 SLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVD 308 Q +YL+IA+ +++ G+ + + +++ L D LY ++ Sbjct: 260 DPLLQYTLYLQIARGALVDGQTERARFMSAEARKLAGHL-NADPTRANLYAAASDVASDS 318 Query: 309 IMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSL------------------IDID 350 S R I L E DR L KA+E + + + ++ D Sbjct: 319 AGSALRELSQISPDHLQEPDRKLLKAAETVGAIVTRAPDTTSRAKRSADEREVPRMAVAD 378 Query: 351 FEHIQKDLLLDKKEPRHTNVS-----MGIESFIKKNRSQIESIDVLLAEA 395 + L N + ++ ++ R ++ ID LL + Sbjct: 379 APQLPAQQTLSAPVEVDFNPARTRSEADLQKTMENARRKLAEIDALLGKT 428 >gi|17984290|gb|AAL53396.1| chemotaxis motc protein precursor [Brucella melitensis bv. 1 str. 16M] Length = 397 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 83/390 (21%), Positives = 145/390 (37%), Gaps = 25/390 (6%) Query: 30 IVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYT 89 + PY+ VRSL+ D+ + G + ++ + +V+ NI A IY Sbjct: 7 LEPYKLVRSLRMLQDQVVAGKPEAVVMLNKLLGFVSTDMSRAQPEVWDKPENIYAAIIYL 66 Query: 90 IISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYL 149 + V ++A +V Y SGQ E K S + + + Sbjct: 67 FNGGNPEAVRKVLANLKTDTVPQELVKGALAYASGQTIEVVKLFSVPLAPEVPAELKASI 126 Query: 150 HLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGYIRAY 208 L+ MM F A+ D VRL +PGT EE A+R L I ++ R Y Sbjct: 127 VLVTANQMMAFDPATALLRLDQVRLEAPGTLFEEAAIRRSLPIAAKRGAADKVRLLSRNY 186 Query: 209 VTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISG 268 + +F HS Y F++ + L ++ DE++V I Q +YL+IA+ +++ G Sbjct: 187 LQRFRHSPYMRDFMAQFVDTTLKLSDRIGDEELVKLIGSADPLLQYTLYLQIARGALVDG 246 Query: 269 KRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQD 328 + + + +++ L D LY ++ S R I L E D Sbjct: 247 QTERARFMSAEARKLAGHL-NADPTRANLYAAASDVASDSAGSALRELSQISPDHLQEPD 305 Query: 329 RYLKKASEIIMSEIGKSL------------------IDIDFEHIQKDLLLDKKEPRHTNV 370 R L KA+E + + + ++ D + L N Sbjct: 306 RKLLKAAETVGAIVTRAPDTTSRAKRSADEREVPRMAVADAPQLPAQQTLSAPVEVDFNP 365 Query: 371 S-----MGIESFIKKNRSQIESIDVLLAEA 395 + ++ ++ R ++ ID LL + Sbjct: 366 ARTRSEADLQKTMENARRKLAEIDALLGKT 395 >gi|62317961|ref|YP_223814.1| chemotaxis protein [Brucella abortus bv. 1 str. 9-941] gi|83269938|ref|YP_419229.1| chemotaxis protein [Brucella melitensis biovar Abortus 2308] gi|161621186|ref|YP_001595072.1| chemotaxis protein [Brucella canis ATCC 23365] gi|163845461|ref|YP_001623116.1| chemotaxis protein [Brucella suis ATCC 23445] gi|189023212|ref|YP_001932953.1| chemotaxis protein [Brucella abortus S19] gi|225628432|ref|ZP_03786466.1| chemotaxis protein [Brucella ceti str. Cudo] gi|225686889|ref|YP_002734861.1| chemotaxis protein [Brucella melitensis ATCC 23457] gi|237817508|ref|ZP_04596498.1| chemotaxis protein [Brucella abortus str. 2308 A] gi|254691606|ref|ZP_05154860.1| chemotaxis protein [Brucella abortus bv. 6 str. 870] gi|254698193|ref|ZP_05160021.1| chemotaxis protein [Brucella abortus bv. 2 str. 86/8/59] gi|254699265|ref|ZP_05161093.1| chemotaxis protein [Brucella suis bv. 5 str. 513] gi|254702389|ref|ZP_05164217.1| chemotaxis protein [Brucella suis bv. 3 str. 686] gi|254706493|ref|ZP_05168321.1| chemotaxis protein [Brucella pinnipedialis M163/99/10] gi|254711823|ref|ZP_05173634.1| chemotaxis protein [Brucella ceti M644/93/1] gi|254714892|ref|ZP_05176703.1| chemotaxis protein [Brucella ceti M13/05/1] gi|254731638|ref|ZP_05190216.1| chemotaxis protein [Brucella abortus bv. 4 str. 292] gi|256015902|ref|YP_003105911.1| chemotaxis protein MotC [Brucella microti CCM 4915] gi|256158328|ref|ZP_05456232.1| chemotaxis protein [Brucella ceti M490/95/1] gi|256252738|ref|ZP_05458274.1| chemotaxis protein [Brucella ceti B1/94] gi|256256794|ref|ZP_05462330.1| chemotaxis protein [Brucella abortus bv. 9 str. C68] gi|256261974|ref|ZP_05464506.1| chemotaxis motc protein [Brucella melitensis bv. 2 str. 63/9] gi|260166799|ref|ZP_05753610.1| chemotaxis protein [Brucella sp. F5/99] gi|260544146|ref|ZP_05819967.1| chemotaxis motc protein [Brucella abortus NCTC 8038] gi|260568710|ref|ZP_05839179.1| chemotaxis motc protein [Brucella suis bv. 4 str. 40] gi|260757238|ref|ZP_05869586.1| chemotaxis protein [Brucella abortus bv. 6 str. 870] gi|260759397|ref|ZP_05871745.1| chemotaxis protein [Brucella abortus bv. 4 str. 292] gi|260762640|ref|ZP_05874972.1| chemotaxis protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883042|ref|ZP_05894656.1| chemotaxis protein [Brucella abortus bv. 9 str. C68] gi|261216581|ref|ZP_05930862.1| chemotaxis protein [Brucella ceti M13/05/1] gi|261219817|ref|ZP_05934098.1| chemotaxis protein [Brucella ceti B1/94] gi|261313946|ref|ZP_05953143.1| chemotaxis protein [Brucella pinnipedialis M163/99/10] gi|261319451|ref|ZP_05958648.1| chemotaxis protein [Brucella ceti M644/93/1] gi|261749707|ref|ZP_05993416.1| chemotaxis protein [Brucella suis bv. 5 str. 513] gi|261752950|ref|ZP_05996659.1| chemotaxis protein [Brucella suis bv. 3 str. 686] gi|261756177|ref|ZP_05999886.1| chemotaxis motc protein [Brucella sp. F5/99] gi|265996842|ref|ZP_06109399.1| chemotaxis protein [Brucella ceti M490/95/1] gi|297250147|ref|ZP_06933848.1| chemotaxis protein MotC [Brucella abortus bv. 5 str. B3196] gi|62198154|gb|AAX76453.1| hypothetical MotC chemotaxis protein [Brucella abortus bv. 1 str. 9-941] gi|82940212|emb|CAJ13268.1| chemotaxis motc protein precursor [Brucella melitensis biovar Abortus 2308] gi|161337997|gb|ABX64301.1| Hypothetical protein BCAN_B1172 [Brucella canis ATCC 23365] gi|163676184|gb|ABY40294.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189021786|gb|ACD74507.1| chemotaxis motc protein precursor [Brucella abortus S19] gi|225616278|gb|EEH13326.1| chemotaxis protein [Brucella ceti str. Cudo] gi|225642994|gb|ACO02907.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|237787263|gb|EEP61481.1| chemotaxis protein [Brucella abortus str. 2308 A] gi|255998562|gb|ACU50249.1| chemotaxis protein MotC [Brucella microti CCM 4915] gi|260097417|gb|EEW81291.1| chemotaxis motc protein [Brucella abortus NCTC 8038] gi|260155375|gb|EEW90456.1| chemotaxis motc protein [Brucella suis bv. 4 str. 40] gi|260669715|gb|EEX56655.1| chemotaxis protein [Brucella abortus bv. 4 str. 292] gi|260673061|gb|EEX59882.1| chemotaxis protein [Brucella abortus bv. 2 str. 86/8/59] gi|260677346|gb|EEX64167.1| chemotaxis protein [Brucella abortus bv. 6 str. 870] gi|260872570|gb|EEX79639.1| chemotaxis protein [Brucella abortus bv. 9 str. C68] gi|260918401|gb|EEX85054.1| chemotaxis protein [Brucella ceti B1/94] gi|260921670|gb|EEX88238.1| chemotaxis protein [Brucella ceti M13/05/1] gi|261292141|gb|EEX95637.1| chemotaxis protein [Brucella ceti M644/93/1] gi|261302972|gb|EEY06469.1| chemotaxis protein [Brucella pinnipedialis M163/99/10] gi|261736161|gb|EEY24157.1| chemotaxis motc protein [Brucella sp. F5/99] gi|261739460|gb|EEY27386.1| chemotaxis protein [Brucella suis bv. 5 str. 513] gi|261742703|gb|EEY30629.1| chemotaxis protein [Brucella suis bv. 3 str. 686] gi|262551139|gb|EEZ07300.1| chemotaxis protein [Brucella ceti M490/95/1] gi|263091458|gb|EEZ15994.1| chemotaxis motc protein [Brucella melitensis bv. 2 str. 63/9] gi|297174016|gb|EFH33380.1| chemotaxis protein MotC [Brucella abortus bv. 5 str. B3196] gi|326411307|gb|ADZ68371.1| chemotaxis protein [Brucella melitensis M28] gi|326554596|gb|ADZ89235.1| chemotaxis protein [Brucella melitensis M5-90] Length = 430 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 86/410 (20%), Positives = 151/410 (36%), Gaps = 28/410 (6%) Query: 13 AMDVFFSFATDQDLVRTI---VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLR 69 + + A Q +R + PY+ VRSL+ D+ + G + ++ + Sbjct: 20 GVAGGTACARAQPEMRPLPVLEPYKLVRSLRMLQDQVVAGKPEAVVMLNKLLGFVSTDMS 79 Query: 70 ATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEES 129 +V+ NI A IY + V ++A +V Y SGQ E Sbjct: 80 RAQPEVWDKPENIYAAIIYLFNGGNPEAVRKVLANLKTDTVPQELVKGALAYASGQTIEV 139 Query: 130 SKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNL 189 K S + + + L+ MM F A+ D VRL +PGT EE A+R Sbjct: 140 VKLFSVPLAPEVPAELKASIVLVTANQMMAFDPATALLRLDQVRLEAPGTLFEEAAIRRS 199 Query: 190 LEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFF 248 L I ++ R Y+ +F HS Y F++ + L ++ DE++V I Sbjct: 200 LPIAAKLGAADKVRLLSRNYLQRFRHSPYMRDFMAQFVDTTLKLSDRIGDEELVKLIGSA 259 Query: 249 SLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVD 308 Q +YL+IA+ +++ G+ + + +++ L D LY ++ Sbjct: 260 DPLLQYTLYLQIARGALVDGQTERARFMSAEARKLAGHL-NADPTRANLYAAASDVASDS 318 Query: 309 IMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSL------------------IDID 350 S R I L E DR L KA+E + + + ++ D Sbjct: 319 AGSALRELSQISPDHLQEPDRKLLKAAETVGAIVTRAPDTTSRAKRSADEREVPRMAVAD 378 Query: 351 FEHIQKDLLLDKKEPRHTNVS-----MGIESFIKKNRSQIESIDVLLAEA 395 + L N + ++ ++ R ++ ID LL + Sbjct: 379 APQLPAQQTLSAPVEVDFNSARTRSEADLQKTMENARRKLAEIDALLGKT 428 >gi|148558481|ref|YP_001258007.1| chemotaxis protein [Brucella ovis ATCC 25840] gi|148369766|gb|ABQ62638.1| putative chemotaxis motC protein [Brucella ovis ATCC 25840] Length = 397 Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats. Identities = 83/390 (21%), Positives = 145/390 (37%), Gaps = 25/390 (6%) Query: 30 IVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYT 89 + PY+ VRSL+ D+ + G + ++ + +V+ NI A IY Sbjct: 7 LEPYKLVRSLRMLQDQVVAGKPEAVVMLNKLLGFVSTDMSRAQPEVWDKPENIYAAIIYL 66 Query: 90 IISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYL 149 + V ++A +V Y SGQ E K S + + + Sbjct: 67 FNGGNPEAVRKVLANLKTDTVPQELVKGALAYASGQTIEVVKLFSVPLAPEVPAELKASI 126 Query: 150 HLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGYIRAY 208 L+ MM F A+ D VRL +PGT EE A+R L I ++ R Y Sbjct: 127 VLVTANQMMAFDPATALLRLDQVRLEAPGTLFEEAAIRRSLPIAAKLGAADKVRLLSRNY 186 Query: 209 VTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISG 268 + +F HS Y F++ + L ++ DE++V I Q +YL+IA+ +++ G Sbjct: 187 LQRFRHSPYMRDFMAQFVDTTLKLSDRIGDEELVKLIGSADPLLQYTLYLQIARGALVDG 246 Query: 269 KRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQD 328 + + + +++ L D LY ++ S R I L E D Sbjct: 247 QTERARFMSAEARKLAGHL-NADPTRANLYAAASDVASDSAGSALRELSQISPDHLQEPD 305 Query: 329 RYLKKASEIIMSEIGKSL------------------IDIDFEHIQKDLLLDKKEPRHTNV 370 R L KA+E + + + ++ D + L N Sbjct: 306 RKLLKAAETVGAIVTRAPDTTSRAKRSADEREVPRMAVADAPQLPAQQTLSAPVEVDFNS 365 Query: 371 S-----MGIESFIKKNRSQIESIDVLLAEA 395 + ++ ++ R ++ ID LL + Sbjct: 366 ARTRSEADLQKTMENARRKLAEIDALLGKT 395 >gi|254720769|ref|ZP_05182580.1| chemotaxis protein [Brucella sp. 83/13] gi|265985827|ref|ZP_06098562.1| chemotaxis protein [Brucella sp. 83/13] gi|306840140|ref|ZP_07472925.1| chemotaxis protein [Brucella sp. NF 2653] gi|264664419|gb|EEZ34680.1| chemotaxis protein [Brucella sp. 83/13] gi|306404785|gb|EFM61079.1| chemotaxis protein [Brucella sp. NF 2653] Length = 430 Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats. Identities = 82/390 (21%), Positives = 145/390 (37%), Gaps = 25/390 (6%) Query: 30 IVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYT 89 + PY+ VRSL+ D+ + G + ++ + +V+ NI A IY Sbjct: 40 LEPYKLVRSLRMLQDQVVAGKPEAVVMLNKLLGFVSTDMGRAQPEVWDKPENIYAAIIYL 99 Query: 90 IISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYL 149 + V ++A +V Y SGQ E K S + + + Sbjct: 100 FNGGNPEAVRKVLANLKSDTVSQELVKGALAYASGQTIEVVKLFSVPLAPEVPAELKASI 159 Query: 150 HLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGYIRAY 208 L+ MM F A+ D VRL +PGT EE A+R L I ++ R Y Sbjct: 160 VLVTANQMMAFDPATALLRLDQVRLEAPGTLFEEAAIRRSLPIAAKLGDADKVRLLSRNY 219 Query: 209 VTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISG 268 + +F HS Y F++ + L ++ +E++V I Q +YL+IA+ +++ G Sbjct: 220 LQRFRHSPYMRDFMAQFVDTTLKLSDRIGNEELVKLIGSADPLLQYTLYLQIARGALVDG 279 Query: 269 KRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQD 328 + + + +++ L D LY ++ S R I L E D Sbjct: 280 QTERARFMSAEARKLAGHL-NADPTRANLYAAASDVASDSAGSALRELSQISPDHLQEPD 338 Query: 329 RYLKKASEIIMSEIGKSL------------------IDIDFEHIQKDLLLDKKEPRHTNV 370 R L KA+E + + + ++ D + L N Sbjct: 339 RKLLKAAETVGAIVTRAPDTTPPAKRSADEREVPRMAVADAPQLPAQQALSAPVEVDFNS 398 Query: 371 S-----MGIESFIKKNRSQIESIDVLLAEA 395 + ++ ++ R ++ ID LL + Sbjct: 399 ARTRSEADLQKTMENARRKLAEIDALLGKT 428 >gi|239834430|ref|ZP_04682758.1| chemotaxis protein [Ochrobactrum intermedium LMG 3301] gi|239822493|gb|EEQ94062.1| chemotaxis protein [Ochrobactrum intermedium LMG 3301] Length = 437 Score = 325 bits (833), Expect = 9e-87, Method: Composition-based stats. Identities = 78/394 (19%), Positives = 144/394 (36%), Gaps = 29/394 (7%) Query: 30 IVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYT 89 + PY+ VRSL+ D+ + G + ++ + DV+ + N+ A IY Sbjct: 43 LEPYKLVRSLRMLQDQIVAGKPEAVVMLNKLLGFVSTDMGRASGDVWHNPENVYAAIIYL 102 Query: 90 IISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYL 149 + V ++A +V Y SGQ E K S D + + Sbjct: 103 FNGGNPEAVRKVLADLKTDAVPPELVKGALAYASGQTIEVVKLFSVPLAPDVPSELKASI 162 Query: 150 HLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGYIRAY 208 L+ M F A+ D VRL +PGT EE A+R + I ++ R Y Sbjct: 163 VLVTASQMTAFDPATALMRLDQVRLDAPGTLFEEAAIRRSMPIAARLGDADKIRLLARNY 222 Query: 209 VTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISG 268 + +F S Y F++ + + ++ + ++ I Q ++YL+IA+ +++ G Sbjct: 223 LQRFPRSPYMRDFMAQFVDAAVKLNDRIGNAELARLIGSADPVMQYSLYLQIARGALVDG 282 Query: 269 KRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQD 328 + + + K++ D+L D LY ++ S R I L E D Sbjct: 283 QTERARFMSAEAKKLADKLK-TDPTRANLYAAASDVASDSAGSALRELSQISPDKLQEPD 341 Query: 329 RYLKKASEIIMSEIGKSL-------IDIDFEHIQKDLLLDKKEPRHTNVSMGI------- 374 R L KA+E + + + ++ + + + E R Sbjct: 342 RKLLKAAEAVGTVVTRTPDASPPAKPALTERDVPPMATANPPENRAEKPVANPAAAPMAV 401 Query: 375 -------------ESFIKKNRSQIESIDVLLAEA 395 + ++ R ++ ID LL + Sbjct: 402 SLKPVKNQPEDDLQKTMEDARRKLAEIDALLGKT 435 >gi|254711222|ref|ZP_05173033.1| chemotaxis protein [Brucella pinnipedialis B2/94] gi|256030149|ref|ZP_05443763.1| chemotaxis protein [Brucella pinnipedialis M292/94/1] gi|261318814|ref|ZP_05958011.1| chemotaxis protein [Brucella pinnipedialis B2/94] gi|265987179|ref|ZP_06099736.1| chemotaxis protein [Brucella pinnipedialis M292/94/1] gi|261298037|gb|EEY01534.1| chemotaxis protein [Brucella pinnipedialis B2/94] gi|264659376|gb|EEZ29637.1| chemotaxis protein [Brucella pinnipedialis M292/94/1] Length = 430 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 86/410 (20%), Positives = 151/410 (36%), Gaps = 28/410 (6%) Query: 13 AMDVFFSFATDQDLVRTI---VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLR 69 + + A Q +R + PY+ VRSL+ D+ + G + ++ + Sbjct: 20 GVAGGTACARAQPEMRPLPVLEPYKLVRSLRMLQDQVVAGKPEAVVMLNKLLGFVSTDMS 79 Query: 70 ATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEES 129 +V+ NI A IY + V ++A +V Y SGQ E Sbjct: 80 RAQPEVWDKPENIYAAIIYLFNGGNPEAVRKVLANLKTDTVPQELVKGALAYASGQTIEV 139 Query: 130 SKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNL 189 K S + + + L+ MM F A+ D VRL +PGT EE A+R Sbjct: 140 VKLFSVPLAPEVPAELKASIVLVTANQMMAFDPATALLRLDQVRLEAPGTLFEEAAIRRS 199 Query: 190 LEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFF 248 L I ++ R Y+ +F HS Y F++ + L ++ DE++V I Sbjct: 200 LPIAAKLGAADKVRLLSRNYLQRFRHSPYMRDFMAQFVDTTLKLSDRIGDEELVKLIGSA 259 Query: 249 SLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVD 308 Q +YL+IA+ +++ G+ + + +++ L D LY ++ Sbjct: 260 DPLLQYTLYLQIARGALVDGQTERARFISAEARKLAGHL-NADPTRANLYAAASDVASDS 318 Query: 309 IMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSL------------------IDID 350 S R I L E DR L KA+E + + + ++ D Sbjct: 319 AGSALRELSQISPDHLQEPDRKLLKAAETVGAIVTRAPDTTSRAKRSADEREVPRMAVAD 378 Query: 351 FEHIQKDLLLDKKEPRHTNVS-----MGIESFIKKNRSQIESIDVLLAEA 395 + L N + ++ ++ R ++ ID LL + Sbjct: 379 APQLPAQQTLSAPVEVDFNSARTRSEADLQKTMENARRKLAEIDALLGKT 428 >gi|256112173|ref|ZP_05453094.1| chemotaxis protein [Brucella melitensis bv. 3 str. Ether] gi|265993599|ref|ZP_06106156.1| chemotaxis protein [Brucella melitensis bv. 3 str. Ether] gi|262764469|gb|EEZ10501.1| chemotaxis protein [Brucella melitensis bv. 3 str. Ether] Length = 430 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 86/410 (20%), Positives = 150/410 (36%), Gaps = 28/410 (6%) Query: 13 AMDVFFSFATDQDLVRTI---VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLR 69 + + A Q +R + PY+ VRSL+ D+ + G + ++ + Sbjct: 20 GVAGGTACARAQPEMRPLPVLEPYKLVRSLRMLQDQVVAGKPEAVVMLNKLLGFVSTDMS 79 Query: 70 ATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEES 129 +V+ NI A IY + V +A +V Y SGQ E Sbjct: 80 RAQPEVWDKPENIYAAIIYLFNGGNPEAVRKALANLKTDTVPQELVKGALAYASGQTIEV 139 Query: 130 SKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNL 189 K S + + + L+ MM F A+ D VRL +PGT EE A+R Sbjct: 140 VKLFSVPLAPEVPAELKASIVLVTANQMMAFDPATALLRLDQVRLEAPGTLFEEAAIRRS 199 Query: 190 LEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFF 248 L I ++ R Y+ +F HS Y F++ + L ++ DE++V I Sbjct: 200 LPIAAKLGAADKVRLLSRNYLQRFRHSPYMRDFMAQFVDTTLKLSDRIGDEELVKLIGSA 259 Query: 249 SLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVD 308 Q +YL+IA+ +++ G+ + + +++ L D LY ++ Sbjct: 260 DPLLQYTLYLQIARGALVDGQTERARFMSAEARKLAGHL-NADPTRANLYAAASDVASDS 318 Query: 309 IMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSL------------------IDID 350 S R I L E DR L KA+E + + + ++ D Sbjct: 319 AGSALRELSQISPDHLQEPDRKLLKAAETVGAIVTRAPDTTSRAKRSADEREVPRMAVAD 378 Query: 351 FEHIQKDLLLDKKEPRHTNVS-----MGIESFIKKNRSQIESIDVLLAEA 395 + L N + ++ ++ R ++ ID LL + Sbjct: 379 APQLPAQQTLSAPVEVDFNSARTRSEADLQKTMENARRKLAEIDALLGKT 428 >gi|256059800|ref|ZP_05449995.1| chemotaxis protein [Brucella neotomae 5K33] gi|261323780|ref|ZP_05962977.1| chemotaxis protein [Brucella neotomae 5K33] gi|261299760|gb|EEY03257.1| chemotaxis protein [Brucella neotomae 5K33] Length = 424 Score = 322 bits (825), Expect = 7e-86, Method: Composition-based stats. Identities = 85/388 (21%), Positives = 148/388 (38%), Gaps = 9/388 (2%) Query: 13 AMDVFFSFATDQDLVRTI---VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLR 69 + + A Q +R + PY+ VRSL+ D+ + G + ++ + Sbjct: 20 GVAGGTACARAQPEMRPLPVLEPYKLVRSLRMLQDQVVAGKPEAVVMLNKLLGFVSTDMS 79 Query: 70 ATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEES 129 +V+ NI A IY + V ++A +V Y SGQ E Sbjct: 80 RAQPEVWDKPENIYAAIIYLFNGGNPEAVRKVLANLKTDTVPQELVKGALAYASGQTIEV 139 Query: 130 SKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNL 189 K S + + + L+ MM F A+ D VRL +PGT EE A+R Sbjct: 140 VKLFSVPLAPEVPAELKASIVLVTANQMMAFDPATALLRLDQVRLEAPGTLFEEAAIRRS 199 Query: 190 LEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFF 248 L I ++ R Y+ +F HS Y F++ + L ++ DE++V I Sbjct: 200 LPIAAKLGAADKVRLLSRNYLQRFRHSPYMRDFMAQFVDTTLKLSDRIGDEELVKLIGSA 259 Query: 249 SLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVD 308 Q +YL+IA+ +++ G+ + + +++ L D LY ++ Sbjct: 260 DPLLQYTLYLQIARGALVDGQTERARFMSAEARKLAGHL-NADPTRANLYAAASDVASDS 318 Query: 309 IMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHT 368 S R I L E DR L KA+E + + + ++ D++E Sbjct: 319 AGSALRELSQISPDHLQEPDRKLLKAAETVGAIVTRAPDTTSRAKR----SADEREVPRM 374 Query: 369 NVSMGIESFIKKNRSQIESIDVLLAEAR 396 V+ + ++ S +D A R Sbjct: 375 AVADAPQLPAQQTLSAPVEVDFNSARTR 402 >gi|294852973|ref|ZP_06793645.1| chemotaxis protein MotC [Brucella sp. NVSL 07-0026] gi|294818628|gb|EFG35628.1| chemotaxis protein MotC [Brucella sp. NVSL 07-0026] Length = 430 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 85/410 (20%), Positives = 150/410 (36%), Gaps = 28/410 (6%) Query: 13 AMDVFFSFATDQDLVRTI---VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLR 69 + + A Q +R + PY+ VRSL+ D+ + + ++ + Sbjct: 20 GVAGGTACARAQPEMRPLPVLEPYKLVRSLRMLQDQVVADKPEAVVMLNKLLGFVSTDMS 79 Query: 70 ATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEES 129 +V+ NI A IY + V ++A +V Y SGQ E Sbjct: 80 RAQPEVWDKPENIYAAIIYLFNGGNPEAVRKVLANLKTDTVPQELVKGALAYASGQTIEV 139 Query: 130 SKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNL 189 K S + + + L+ MM F A+ D VRL +PGT EE A+R Sbjct: 140 VKLFSVPLAPEVPAELKASIVLVTANQMMAFDPATALLRLDQVRLEAPGTLFEEAAIRRS 199 Query: 190 LEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFF 248 L I ++ R Y+ +F HS Y F++ + L ++ DE++V I Sbjct: 200 LPIAAKLGAADKVRLLSRNYLQRFRHSPYMRDFMAQFVDTTLKLSDRIGDEELVKLIGSA 259 Query: 249 SLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVD 308 Q +YL+IA+ +++ G+ + + +++ L D LY ++ Sbjct: 260 DPLLQYTLYLQIARGALVDGQTERARFMSAEARKLAGHL-NADPTRANLYAAASDVASDS 318 Query: 309 IMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSL------------------IDID 350 S R I L E DR L KA+E + + + ++ D Sbjct: 319 AGSALRELSQISPDHLQEPDRKLLKAAETVEAIVTRAPDTTSRAKRSADEREVPRMAVAD 378 Query: 351 FEHIQKDLLLDKKEPRHTNVS-----MGIESFIKKNRSQIESIDVLLAEA 395 + L N + ++ ++ R ++ ID LL + Sbjct: 379 APQLPAQQTLSAPVEVDFNSARTRSEADLQKTMENARRKLAEIDALLGKT 428 >gi|254695097|ref|ZP_05156925.1| chemotaxis protein [Brucella abortus bv. 3 str. Tulya] gi|261215448|ref|ZP_05929729.1| chemotaxis protein [Brucella abortus bv. 3 str. Tulya] gi|260917055|gb|EEX83916.1| chemotaxis protein [Brucella abortus bv. 3 str. Tulya] Length = 435 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 86/415 (20%), Positives = 151/415 (36%), Gaps = 33/415 (7%) Query: 13 AMDVFFSFATDQDLVRTI---VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLR 69 + + A Q +R + PY+ VRSL+ D+ + G + ++ + Sbjct: 20 GVAGGTACARAQPEMRPLPVLEPYKLVRSLRMLQDQVVAGKPEAVVMLNKLLGFVSTDMS 79 Query: 70 ATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEES 129 +V+ NI A IY + V ++A +V Y SGQ E Sbjct: 80 RAQPEVWDKPENIYAAIIYLFNGGNPEAVRKVLANLKTDTVPQELVKGALAYASGQTIEV 139 Query: 130 SKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAV-----HFFDYVRLTSPGTFLEEI 184 K S + + + L+ MM F A+ D VRL +PGT EE Sbjct: 140 VKLFSVPLAPEVPAELKASIVLVTANQMMAFDPATALLRLDQVRLDQVRLEAPGTLFEEA 199 Query: 185 ALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVF 243 A+R L I ++ R Y+ +F HS Y F++ + L ++ DE++V Sbjct: 200 AIRRSLPIAAKLGAADKVRLLSRNYLQRFRHSPYMRDFMAQFVDTTLKLSDRIGDEELVK 259 Query: 244 TISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILN 303 I Q +YL+IA+ +++ G+ + + +++ L D LY + Sbjct: 260 LIGSADPLLQYTLYLQIARGALVDGQTERARFMSAEARKLAGHL-NADPTRANLYAAASD 318 Query: 304 IPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSL----------------- 346 + S R I L E DR L KA+E + + + ++ Sbjct: 319 VASDSAGSALRELSQISPDHLQEPDRKLLKAAETVGAIVTRAPDTTSRAKRSADEREVPR 378 Query: 347 -IDIDFEHIQKDLLLDKKEPRHTNVS-----MGIESFIKKNRSQIESIDVLLAEA 395 D + L N + ++ ++ R ++ ID LL + Sbjct: 379 MAVADAPQLPAQQTLSAPVEVDFNSARTRSEADLQKTMENARRKLAEIDALLGKT 433 >gi|110632644|ref|YP_672852.1| chemotaxis protein [Mesorhizobium sp. BNC1] gi|110283628|gb|ABG61687.1| chemotaxis precursor (motility protein C) transmembrane [Chelativorans sp. BNC1] Length = 391 Score = 319 bits (817), Expect = 6e-85, Method: Composition-based stats. Identities = 88/387 (22%), Positives = 150/387 (38%), Gaps = 7/387 (1%) Query: 13 AMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATH 72 AM T + PYQ +RSLQ D GD + ++ +L Sbjct: 8 AMLAACVSLTASANAEGLEPYQMIRSLQLVQDRIADGDHAALPIQRRLLAIIDERLHTAD 67 Query: 73 MDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKE 132 F + N A+ IY+ + + +D +I++ + L +Y G L + + Sbjct: 68 ---FENPHNFRALLIYSASGGNPATLDAVISRLKLDEDQSRLSNGLTQYARGDLRAAREM 124 Query: 133 LSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEI 192 LS + + L L+IG + + +A+ FFD RL SPGT +EE ALR L + Sbjct: 125 LSATELSTLDPELAAPLALVIGSLLAQQAPTEALRFFDQARLISPGTLIEEAALRRSLTL 184 Query: 193 TQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLE 251 + ER R Y +F S Y F + + + ++ + ++ + Sbjct: 185 SAELRDPERFALASRQYAWRFLRSPYASQFAEAFVSGVVALRGEIDLALVEEIVANMRRD 244 Query: 252 EQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMS 311 + IYL+IA+ S I G + A + + D D LY N+ + D+ Sbjct: 245 QAHVIYLRIARQSAIEGYDNLLTFASRNADKYADSGGGLDP-RSVLYGNMALVASEDVKD 303 Query: 312 LQRSTCNIPYYSLMEQDRYLKKASEIIMSEI-GKSLIDIDFEHIQKDLLLDKKEPRHTNV 370 + + +I L DR L A+ + I + + Q + Sbjct: 304 VLHTLEHIDAKRLSPNDRKLLNAAREVARNILSRPAAGSEASARQGSFPQGEAVVAQEGE 363 Query: 371 SMGI-ESFIKKNRSQIESIDVLLAEAR 396 + +F+ ++SIDVL+AEAR Sbjct: 364 DEQLNGAFVADTLKTLQSIDVLIAEAR 390 >gi|121602873|ref|YP_989387.1| chemotaxis protein [Bartonella bacilliformis KC583] gi|120615050|gb|ABM45651.1| putative flagellar motor protein [Bartonella bacilliformis KC583] Length = 456 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 86/382 (22%), Positives = 153/382 (40%), Gaps = 19/382 (4%) Query: 31 VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTI 90 P Q VRSLQ D+ M G +K P++++E G + DV+ D N+ A+ IY + Sbjct: 74 QPIQLVRSLQNLQDKIMSGQEGALQKQPELLREIGEKFLTLSPDVWQDEHNLYALLIYLL 133 Query: 91 ISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKD---NTRGIVP 147 + VV ++ +G ++ Y S + EE + + + D++ + Sbjct: 134 NGGNPRVVRIILEDHGQGRIAQNLITGALAYTSHRREEFFRAFANLSDQELQLLPPALFL 193 Query: 148 YLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGYIR 206 + L A+ + VRL +PGT EE A+R L + E +R Sbjct: 194 SIVLSTVTNTSEKDPALALKQLNQVRLLAPGTLFEESAIRRELRVAATLGKAELLMLLVR 253 Query: 207 AYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVI 266 Y +F S Y ++F S + L DE +S+ Q Y ++++ ++I Sbjct: 254 NYAHRFEKSPYVNNFWSEFRLAIPRIEKDLSDEQFETLVSYAPTMLQLMTYTEVSRAALI 313 Query: 267 SGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLME 326 + + L+ ++ + L+ D I+LY V + I L+E Sbjct: 314 DARMERVKLSAQKALMLAHELNVSDAP-IRLYYAASLAGSVTAEEAAKMLQTISSNDLLE 372 Query: 327 QDRYLKKASEIIMSEIGKSLIDIDFE-------HIQKDLLLDKKEPRH-------TNVSM 372 +DR L A++ I + SL D Q L+ + R +++ Sbjct: 373 RDRPLLTAAQAIADRVSFSLSDDSQTVETQALISSQSQETLETQSKRRVGQQSDLPSIAT 432 Query: 373 GIESFIKKNRSQIESIDVLLAE 394 + FI++ R +I +D LL E Sbjct: 433 ETDQFIEQTREKINIVDKLLGE 454 >gi|170748096|ref|YP_001754356.1| chemotaxis protein [Methylobacterium radiotolerans JCM 2831] gi|170654618|gb|ACB23673.1| putative chemotaxis protein precursor [Methylobacterium radiotolerans JCM 2831] Length = 415 Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats. Identities = 78/369 (21%), Positives = 145/369 (39%), Gaps = 8/369 (2%) Query: 32 PYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTII 91 P Q VR+LQ D G ++ + P ++ L A +++ N+ + + + Sbjct: 48 PVQWVRTLQLLQDRVAAGSLAAHESQPLLIARINADLLAAPPEIWGRRNNLRSAITFALS 107 Query: 92 SQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHL 151 +V+ L A+D G + + Y G+ E+ + L + D + + L Sbjct: 108 GGGPAVLRRLTARDGLGEPEATLARGALAYLEGREAEARRLLQDVDTTDLPPTLAGAVGL 167 Query: 152 LIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLE-ITQNEVGERAFGYIRAYVT 210 + +A+ D VR+ PGT EE ALR + + Q + Y+ Sbjct: 168 TQASLAVTDQPARAIGLLDRVRVLLPGTLAEEGALRREIFTLGQIGDLKTFEALAIQYLR 227 Query: 211 QFHHSIYKDHFISVLL---RFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVIS 267 +F HS+Y +F L F G + + +S E +R +YL +AQ ++ + Sbjct: 228 RFPHSVYAGNFRQRLAYQLTQFDIGHDEGRFGTLNRILSELRPESRRDLYLLVAQTAIQA 287 Query: 268 GKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPF-VDIMSLQRSTCNIPYYSLME 326 GK A ++ + + QLY I S R+ ++ L Sbjct: 288 GKTAAALRASEKALALCAP-GSAEATQGQLYRAAAEIVNLATFQSGLRTLRSLDRAKLTA 346 Query: 327 QDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQIE 386 +D+ L + + IG+ L + + L K + + G S I K ++ I+ Sbjct: 347 RDQLLLETALSTAGAIGRGL--AGRSGLPEADSLSKPARAARDPADGPASLIPKAQATID 404 Query: 387 SIDVLLAEA 395 ID++L++A Sbjct: 405 RIDLMLSKA 413 >gi|115523190|ref|YP_780101.1| chemotaxis protein [Rhodopseudomonas palustris BisA53] gi|115517137|gb|ABJ05121.1| putative chemotaxis protein precursor [Rhodopseudomonas palustris BisA53] Length = 395 Score = 315 bits (807), Expect = 9e-84, Method: Composition-based stats. Identities = 82/395 (20%), Positives = 139/395 (35%), Gaps = 9/395 (2%) Query: 7 ICTMMVAMDVFFSFATDQDLVRTI-VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETG 65 + + +A+ A + + PYQ VRSLQ D+ RG++ P ++K G Sbjct: 4 LAKVAIALLALLGSARADEAATSAREPYQLVRSLQSLQDQIARGNLEAHNAQPALLKRLG 63 Query: 66 VQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQ 125 Q R +++ D RN A ++ + D VV L ++ D AI+ Y G+ Sbjct: 64 EQFRNADPNLWNDPRNSRAAVVFLLSGGDPQVVAALRSRKLL-SVDEAILDGAIAYVEGR 122 Query: 126 LEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIA 185 EE+ L +K + + L + + V D VRL PGT +EE A Sbjct: 123 SEEAKARLGGVKSGALPATLGAEITLAQSALLAQSDLKATVARLDEVRLLMPGTLIEEAA 182 Query: 186 LRNLLEIT-QNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL---KLPDEDI 241 LR + + Q + ++ Y ++ HSIY +F + Sbjct: 183 LRREIFLVGQIDDFDKFERLATQYFRRYRHSIYAGNFRQRFALSVARFSFVQQADRFPRL 242 Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENI 301 V + QRA+Y I + +++ GK ++ LA ++ + D + Y Sbjct: 243 VGVLDHLDRGSQRALYFLITRTALVRGKTEMANLAAERAISLTDE-GTAERTRAYFYRAA 301 Query: 302 LNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLD 361 + + L D L A+ + + K L E D Sbjct: 302 ARLVSDGHEQALEDLQQLDTGRLSTPDANLLAAALALGRTVRKPLPAASTETDWDDGEPT 361 Query: 362 KKEPRHTNVSMGIESFIKKNRSQIESIDVLLAEAR 396 PR S I ++ L E + Sbjct: 362 AVRPRIDFSSSIGA--IDLAEKLLDQSKDQLKERK 394 >gi|182679601|ref|YP_001833747.1| putative chemotaxis protein precursor [Beijerinckia indica subsp. indica ATCC 9039] gi|182635484|gb|ACB96258.1| putative chemotaxis protein precursor [Beijerinckia indica subsp. indica ATCC 9039] Length = 420 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 71/363 (19%), Positives = 136/363 (37%), Gaps = 8/363 (2%) Query: 27 VRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVW 86 P + VRS+ D+ + G ++ +P I+ + L A + DV+ D +NI+A+ Sbjct: 52 HPERSPVEIVRSIMTLQDQVVSGKKPVETAMPKIMSQMADHLLAQNPDVWKDPKNIEALI 111 Query: 87 IYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIV 146 Y + V ++ DT ++ A+ Y +G + L+ + + + + Sbjct: 112 TYLLSGGQSRVAKKILEIDTLPSEQRNLLEAVYAYITGHKTRAENLLATVDPQTLSALLG 171 Query: 147 PYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQ-NEVGERAFGYI 205 ++ L+ + +A+ + D R+ +PGT +EE ALR + + + Sbjct: 172 AHVALIKALLVAESDPAKAISYLDTARILAPGTLIEEAALRREIFLADSANKLSKFVFLS 231 Query: 206 RAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDED---IVFTISFFSLEEQRAIYLKIAQ 262 R Y+ +FH+S+Y D+F +H L E + I+ EQ IYL IA Sbjct: 232 RQYIRRFHNSVYFDNFYKHFSAAIIHLGLADNVEQVAKLDDLIAEMKPGEQARIYLAIAY 291 Query: 263 NSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYY 322 S+I+G+ + + + + +LY+ ++ + + Sbjct: 292 KSLINGRLPVASFVLAKASALTRETSST-PDQYKLYQASVDFLAGHAEKGLNTISQLDES 350 Query: 323 SLMEQDRYLKKASEIIMSEIGK---SLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIK 379 +L D L I I H Q D L + + S Sbjct: 351 NLTALDISLAHTILEIGGAIQSLDHESHSAQHAHAQPDASLVDHDDIQDLGELATRSIEA 410 Query: 380 KNR 382 +R Sbjct: 411 TDR 413 >gi|260466607|ref|ZP_05812795.1| hypothetical protein MesopDRAFT_5442 [Mesorhizobium opportunistum WSM2075] gi|259029613|gb|EEW30901.1| hypothetical protein MesopDRAFT_5442 [Mesorhizobium opportunistum WSM2075] Length = 455 Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats. Identities = 72/324 (22%), Positives = 130/324 (40%), Gaps = 1/324 (0%) Query: 26 LVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAV 85 + PYQ VRSLQ D GD + +++ T +LR F D +N A+ Sbjct: 26 AQDALQPYQLVRSLQLIQDRIAAGDHAAMPMQAKLLEMTDARLREADAQDFEDPKNFRAL 85 Query: 86 WIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGI 145 +Y + + V+ +++ D+AI + Y +G+ ++ L I + Sbjct: 86 LVYGMSGGNPVTVEAAVSRAAADPGDLAIAKGVIDYLNGRPGDAITALGPIDPMALPGDL 145 Query: 146 VPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGY 204 +L L+ G + A+ D +L SPGT +EE ALR + I R Sbjct: 146 GAFLALVKGSLLAGDDPAAALKLLDEAKLLSPGTLVEEAALRRSVGIAVAQGDAARFALA 205 Query: 205 IRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNS 264 YV ++ +S Y F + + + + + + S E ++ IYL+IA+ + Sbjct: 206 STQYVERYLYSPYASQFADSFVSGVIALHMSISQDKLADITSMMDPEREKVIYLRIARRA 265 Query: 265 VISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSL 324 I G ++ A + ++ D +D LY ++ + I ++ I L Sbjct: 266 AIDGLNELSAFASTRAEQGRDGNTNQDDPRALLYSSLSTVTSDTIEDVRTKLGKIDRSKL 325 Query: 325 MEQDRYLKKASEIIMSEIGKSLID 348 + DR L A++ I E+ Sbjct: 326 SDGDRDLLDAAQAIAGEVVAPPAS 349 >gi|158422248|ref|YP_001523540.1| chemotaxis protein MotC [Azorhizobium caulinodans ORS 571] gi|158329137|dbj|BAF86622.1| hypothetical MotC chemotaxis protein [Azorhizobium caulinodans ORS 571] Length = 872 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 133/353 (37%), Gaps = 6/353 (1%) Query: 25 DLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDA 84 + +PY+ VR LQR D GD + + ++ E V+ D RN A Sbjct: 388 ERSTGPLPYEQVRRLQRLQDRIATGDTAALQAQRALIAEIEDAFHKADPKVWQDPRNARA 447 Query: 85 VWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRG 144 ++ + + +L++ D ++ Y G+ E++ + L+ I Sbjct: 448 AVVFFLSGGSPKELRNLLSLKPAPAIDERLLQGALAYVEGRPEDAERYLANINPLQLPDA 507 Query: 145 IVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFG 203 + + ++ + ++A+ D RL PGT +EE ALR + + + Sbjct: 508 LGGQIAMVQAAVTVGKDPRKAMAQLDIARLVMPGTLVEEAALRREILVAAQLGELNKFEH 567 Query: 204 YIRAYVTQFHHSIYKDHFISVLLRFFLHGQ---LKLPDEDIVFTISFFSLEEQRAIYLKI 260 + Y+ +F HS+Y +F + + +V + + + IYL + Sbjct: 568 LSKQYLYRFRHSVYAGNFRQRFAAALTRMAFVNDRDQFQRLVSLLQPLDRDSRVDIYLMV 627 Query: 261 AQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIP-FVDIMSLQRSTCNI 319 A+ ++ GK LA +++ D + D ++Y+ +N ++ + +I Sbjct: 628 ARGALNQGKFTAASLASERVLVDADPV-STDAERARVYKAAVNAASSKEVDAAVVELKSI 686 Query: 320 PYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSM 372 L D L A+ + + + ++ + +D + HT + Sbjct: 687 IRSRLPPDDVMLLNAALTTAELVRSAGETVKQAAVKPQVKVDPMQVTHTAGTA 739 >gi|319781669|ref|YP_004141145.1| hypothetical protein Mesci_1942 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167557|gb|ADV11095.1| hypothetical protein Mesci_1942 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 460 Score = 306 bits (783), Expect = 5e-81, Method: Composition-based stats. Identities = 77/363 (21%), Positives = 140/363 (38%), Gaps = 1/363 (0%) Query: 26 LVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAV 85 + PYQ VRSLQ D GD + +++ T +LRA + + + D +N A+ Sbjct: 26 AQEALQPYQLVRSLQLIQDRIAAGDHAALPMQAKLLEMTDARLRAANAEDYKDPKNFRAL 85 Query: 86 WIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGI 145 +Y + + V+ ++ T +AI + +Y +G+ ++ + L I + Sbjct: 86 LVYGMSGGNPVTVEAATSRATADPQSLAIAKGVIEYLNGRPGKAIEALRPIDPMALPPDL 145 Query: 146 VPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGY 204 +L L+ G + A+ D RL SPGT +EE ALR + + R Sbjct: 146 GAFLALVKGSLLAGDQPATALGLLDEARLLSPGTLVEEAALRRSVGLAVAQGDAARFALA 205 Query: 205 IRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNS 264 YV ++ +S Y F + + + + + + S E ++ IYL+IA+ + Sbjct: 206 STQYVERYLYSPYASQFADSFVSGVIALHMSISQDKLGDITSMMDPEREKVIYLRIARRA 265 Query: 265 VISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSL 324 I G + A + ++ D +D LY ++ + I ++ I L Sbjct: 266 AIDGLNDLSAFASARAEQGRDGNTNQDDPRALLYASLSTVTSGTIEDIRAKLGKIDRSRL 325 Query: 325 MEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQ 384 E DR L A++ I E+ + E P +S + Sbjct: 326 SEGDRALLDAAQAIAGEVVAPPTALPAEKPAPVAAEQPPAPEIATPQNADDSSLPPVEGA 385 Query: 385 IES 387 I Sbjct: 386 ISE 388 >gi|90422621|ref|YP_530991.1| chemotaxis protein [Rhodopseudomonas palustris BisB18] gi|90104635|gb|ABD86672.1| putative chemotaxis protein precursor [Rhodopseudomonas palustris BisB18] Length = 396 Score = 305 bits (782), Expect = 6e-81, Method: Composition-based stats. Identities = 79/369 (21%), Positives = 149/369 (40%), Gaps = 9/369 (2%) Query: 32 PYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTII 91 PYQ VRSLQ D+ RG++ ++K+ G Q + +++ D+RN A + + Sbjct: 30 PYQLVRSLQSLQDDIARGNLDAHNAQRGLLKQLGEQFQQADPNLWKDSRNARAAVTFLLS 89 Query: 92 SQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHL 151 D VV L ++D D AI+ Y G+ +E+ + L ++ + + + L Sbjct: 90 GGDPQVVHALRSRDLL-SLDAAILDGAMAYIEGRPDEARERLGGVRARSLPAALGAEIAL 148 Query: 152 LIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEIT-QNEVGERAFGYIRAYVT 210 + + + ++ D VRL PGT +EE ALR + + Q + ++ Y Sbjct: 149 VQSALLAKSDVKASIDRLDEVRLLMPGTLVEEAALRREIFLVGQADDFDKFEFLATRYFR 208 Query: 211 QFHHSIYKDHFISVLLRFFLHGQLK---LPDEDIVFTISFFSLEEQRAIYLKIAQNSVIS 267 ++ HSIY +F +V + QRA+YL IA+ +++ Sbjct: 209 RYRHSIYAGNFRQRFALSVARFSFAQQTARFPRLVGVLDHLDGASQRALYLLIARTALVR 268 Query: 268 GKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQ 327 GK ++ LA +++ + + D +LY + I L EQ Sbjct: 269 GKTEMTVLAAERVLALTEDEDSPARGRAELYRAAARLVTSGHAQALEDLQQIDAGRLPEQ 328 Query: 328 DRYLKKASEIIMSEIGKSLIDIDFE-HIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQIE 386 D L A+ + + K+L + + + + + + S+G I + + ++ Sbjct: 329 DAELLAAALKLGRTVRKALPTVSAKVDVDDGVPTAMRPRIDFSASLGA---INRAQQLLD 385 Query: 387 SIDVLLAEA 395 L E Sbjct: 386 ESGAQLKER 394 >gi|217976236|ref|YP_002360383.1| chemotaxis protein [Methylocella silvestris BL2] gi|217501612|gb|ACK49021.1| chemotaxis protein [Methylocella silvestris BL2] Length = 403 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 77/391 (19%), Positives = 142/391 (36%), Gaps = 15/391 (3%) Query: 16 VFFSFATDQDLVR------TIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLR 69 +F FA QD + P++ VR++ D + GD + + K+P ++ + +L Sbjct: 15 LFQGFAVAQDGHSAAPQGGDVRPFELVRTVAALQDRIVMGDAAAKAKLPLLISQISDRLF 74 Query: 70 ATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEES 129 A V+ + RN A+ YT+ V+ ++ + + ++ Y GQ ++ Sbjct: 75 ACGAAVWAEARNDHAIVAYTLSGGQPRVIRKVLQTGAVPHAEADLMAGALAYAEGQEAKA 134 Query: 130 SKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNL 189 + L I+ + + L + ++A D R+ +PGT +EE ALR Sbjct: 135 KQILLPIEATKLPPSVGGLVALAQAALLSKIDPRRAARLLDEARILAPGTLVEEAALRRS 194 Query: 190 LEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHG---QLKLPDEDIVFTI 245 + +R Y ++ S+Y + F + P + + Sbjct: 195 ALLADEVADFDRFINASSQYFRRYSKSLYANDFRRRFAESIVRFGLKDEPGPSARLTGLL 254 Query: 246 SFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIP 305 S Q +YL IAQ V +GK A ++ + + QLY I + Sbjct: 255 SELDRPYQAELYLIIAQAGVRNGKIGPAKAAAEKALSLS-EQGGAARSRAQLYAAIAKVL 313 Query: 306 FVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEP 365 V I L DR LK A + ++I +S D Q +D+ Sbjct: 314 IVSPAEGLTELAQIDDAVLPRGDRDLKSAVAQLATQIQRS---ADGGQAQDASSIDRAPG 370 Query: 366 RHTNV-SMGIESFIKKNRSQIESIDVLLAEA 395 I+ ++ ++ D LL + Sbjct: 371 SGGESHDANGSMLIQSAQAALQQTDALLRRS 401 >gi|161511088|ref|NP_773501.2| chemotaxis protein [Bradyrhizobium japonicum USDA 110] Length = 397 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 68/370 (18%), Positives = 137/370 (37%), Gaps = 12/370 (3%) Query: 31 VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTI 90 PY+ VR+LQ D GD + ++++ G + A V+ + +N AV IY + Sbjct: 35 EPYELVRALQAVQDGIANGDTAAHGSHIALIRQIGEKFLAADASVWSNAQNGQAVVIYLL 94 Query: 91 ISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLH 150 +V L D + Y G+ +E+ + L +K + G+ + Sbjct: 95 SGGAPQLVRKLPRDKM--NVDARLFDGALAYVEGRQDEARELLKDVKPRTIPSGLGGQVA 152 Query: 151 LLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEIT-QNEVGERAFGYIRAYV 209 L+ G + A+ D RL PGT +EE ALR + + Q E ++ AY+ Sbjct: 153 LVQGALFARTEASLAIERLDDARLLLPGTLVEEAALRREILLVGQAEDFDKFEFLTLAYI 212 Query: 210 TQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFF---SLEEQRAIYLKIAQNSVI 266 + +SIY F L L + ++ + +YL IA+++++ Sbjct: 213 RHYRNSIYAGDFWQRFSTGLTQSSLALDERRFARIVTMLEQIDRGSRLKLYLVIARSAMV 272 Query: 267 SGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLME 326 G+ + LA ++ + + + + + + L E Sbjct: 273 RGRMAVTRLAGERALTLSADA-SAERERAHFFRGASRVLTDEYDGGLAELKALDRSKLPE 331 Query: 327 QDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQIE 386 +D L A+ + ++ K K P +++ + + R ++ Sbjct: 332 RDLPLLNATVQLALDVRKPFASGSAATADK----PPATPARLDLASSTATL-ARARKELG 386 Query: 387 SIDVLLAEAR 396 +++L + R Sbjct: 387 ELELLTRDRR 396 >gi|27355142|dbj|BAC52126.1| motC [Bradyrhizobium japonicum USDA 110] Length = 386 Score = 301 bits (772), Expect = 1e-79, Method: Composition-based stats. Identities = 68/370 (18%), Positives = 137/370 (37%), Gaps = 12/370 (3%) Query: 31 VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTI 90 PY+ VR+LQ D GD + ++++ G + A V+ + +N AV IY + Sbjct: 24 EPYELVRALQAVQDGIANGDTAAHGSHIALIRQIGEKFLAADASVWSNAQNGQAVVIYLL 83 Query: 91 ISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLH 150 +V L D + Y G+ +E+ + L +K + G+ + Sbjct: 84 SGGAPQLVRKLPRDKM--NVDARLFDGALAYVEGRQDEARELLKDVKPRTIPSGLGGQVA 141 Query: 151 LLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEIT-QNEVGERAFGYIRAYV 209 L+ G + A+ D RL PGT +EE ALR + + Q E ++ AY+ Sbjct: 142 LVQGALFARTEASLAIERLDDARLLLPGTLVEEAALRREILLVGQAEDFDKFEFLTLAYI 201 Query: 210 TQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFF---SLEEQRAIYLKIAQNSVI 266 + +SIY F L L + ++ + +YL IA+++++ Sbjct: 202 RHYRNSIYAGDFWQRFSTGLTQSSLALDERRFARIVTMLEQIDRGSRLKLYLVIARSAMV 261 Query: 267 SGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLME 326 G+ + LA ++ + + + + + + L E Sbjct: 262 RGRMAVTRLAGERALTLSADA-SAERERAHFFRGASRVLTDEYDGGLAELKALDRSKLPE 320 Query: 327 QDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQIE 386 +D L A+ + ++ K K P +++ + + R ++ Sbjct: 321 RDLPLLNATVQLALDVRKPFASGSAATADK----PPATPARLDLASSTATL-ARARKELG 375 Query: 387 SIDVLLAEAR 396 +++L + R Sbjct: 376 ELELLTRDRR 385 >gi|319409173|emb|CBI82817.1| putative flagellar motor protein [Bartonella schoenbuchensis R1] Length = 463 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 83/395 (21%), Positives = 158/395 (40%), Gaps = 34/395 (8%) Query: 32 PYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTII 91 P Q VRSLQ D+ + G + +K P +++E G + + + ++ D +N+ A+ IY Sbjct: 69 PMQLVRSLQNLQDQIVSGQEEVLQKQPQLLREIGEKFLSFNPSIWKDKQNLYALLIYLFN 128 Query: 92 SQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKI---KDKDNTRGIVPY 148 + SVV ++ +G I+ + Y S + E K + + + + Sbjct: 129 GGNPSVVRVILKSYGQGVIAENIMTGVLAYLSHKQEVFFKTFANLTDEDIQSIPPALFFS 188 Query: 149 LHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGYIRA 207 + L + A+ D VRL SPGT EE A+R +++ + +R Sbjct: 189 IVLSTVGNTIMKDPVLAMKQLDQVRLLSPGTLFEESAIRREIKVATILGQTDLLTLLVRN 248 Query: 208 YVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVIS 267 Y ++F S Y F KL D+ + IS+ Q Y+ +++ ++I+ Sbjct: 249 YASRFGKSPYAKDFWREFGIAIPRIDEKLDDQQLEALISYAPPMVQLMAYMDVSRTALIN 308 Query: 268 GKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQ 327 + + L+ ++ + L+ D +LY V ++ NI L E+ Sbjct: 309 ARMERAQLSAQKALTLAHELNVNDAP-ARLYYAASLASSVTAHEAEQLLQNISSKDLSEK 367 Query: 328 DRYLKKASEIIMSEIGKSLIDI-------DFEHIQKDLLLD------------------- 361 DR L A++ + ++ SL+D D Q LD Sbjct: 368 DRLLFIAAQAVAQKVTSSLVDGQKEVKTQDSTQPQSQKELDTMSKETVSKEVEVVSKEAK 427 Query: 362 ---KKEPRHTNVSMGIESFIKKNRSQIESIDVLLA 393 +++ ++ S I I++ + +I+ +D LL Sbjct: 428 EAVEQQNAPSSTSTEINQLIEQAQEKIDEVDKLLG 462 >gi|328545494|ref|YP_004305603.1| chemotaxis protein [polymorphum gilvum SL003B-26A1] gi|326415235|gb|ADZ72298.1| Probable chemotaxis protein [Polymorphum gilvum SL003B-26A1] Length = 400 Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 66/368 (17%), Positives = 134/368 (36%), Gaps = 8/368 (2%) Query: 32 PYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTII 91 PY+ VR+LQ E +G+ ++ + + + D RN A I+ + Sbjct: 32 PYRMVRTLQALQGEVAQGNSHAHTAQRALLLQMDEVFATAPAETWSDPRNARAAVIHLLS 91 Query: 92 SQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHL 151 V+ L+ D + D A++ Y G+ EE+ L+ I D + + L Sbjct: 92 GGHPRVMRQLLDLDPQPDLDPALMRGALAYVEGRQEEARDLLTAIDPMDLPPNLGGQVAL 151 Query: 152 LIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGYIRAYVT 210 + + + A+ RL PGT +EE ALR + + ER Y+ Sbjct: 152 VRAALAVGDDPEAAMKMLGVARLLMPGTLVEEAALRREVFVAGKIGDIERFQSLSIRYLR 211 Query: 211 QFHHSIYKDHFISVLLRFFLH---GQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVIS 267 +F SIY+ F G+ + ++ F + +R +YL++A+ +++ Sbjct: 212 RFRGSIYEGDFRRRFALALETLGFGENDAKFALLESLLAEFDSDSRRMLYLRLARQALVG 271 Query: 268 GKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQ 327 G +I A ++ + + +++Y + DI + +I L + Sbjct: 272 GHLEIVRKATERALPLAMAGTSEHR-LLRIYRAGALLDPRDIGEARDLLWSIDRGELTPE 330 Query: 328 DRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQIES 387 +R L A +++ + + D P+ + + + Sbjct: 331 ERELMDAVYAVLNRVRHWPEPPPGTIGEFGAFADIGAPKAPD---WHRPTMAAADRILTE 387 Query: 388 IDVLLAEA 395 LL ++ Sbjct: 388 TGALLQQS 395 >gi|118589970|ref|ZP_01547374.1| probable chemotaxis protein precursor [Stappia aggregata IAM 12614] gi|118437467|gb|EAV44104.1| probable chemotaxis protein precursor [Stappia aggregata IAM 12614] Length = 411 Score = 295 bits (756), Expect = 7e-78, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 129/349 (36%), Gaps = 6/349 (1%) Query: 6 LICTMMVAMDVFFSFAT-DQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKET 64 LI + V +A PY+ +RSLQ ++ +G+ + ++ + Sbjct: 15 LIALVAAVASVSAGWAQQVGKETSVPQPYEMIRSLQSLQEQISQGNTHALQAQRALLTKM 74 Query: 65 GVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSG 124 +V+ + RN A ++ + V+ L++ D D ++ A Y G Sbjct: 75 DAHFVVLQAEVWQEPRNARAAVVHLLSGGHPDVMRYLLSLDPAPAVDRKLMEASLAYVEG 134 Query: 125 QLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEI 184 + EE L+ I + + ++ L+ + ++A+ L PGT +EE Sbjct: 135 REEEMQVLLADIDPLELPASLGGHVALVKAAPYIRTDPEKAMELLQVASLLMPGTLVEEA 194 Query: 185 ALRNLLEIT-QNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL---KLPDED 240 ALR + + +R Y+ +F S+Y F + Sbjct: 195 ALRREVFLAGMTANVDRFRVLSIRYLRRFRASVYSGDFRRRFALSLDTLGFVKSEDKFAL 254 Query: 241 IVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYEN 300 + + F + +R +YL++A++++++G + A + + K+ +++Y Sbjct: 255 LDDVLHEFDADSRRGLYLRLARSALLAGHLNVARKATGEALTLTVE-GTKENEILKIYLA 313 Query: 301 ILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDI 349 + I + + +I L QD + ++++ + Sbjct: 314 ATRLDPEFITANRDLLWSIDKSILTAQDLAMLDGVYVVLNSVRHFPEPP 362 >gi|319406990|emb|CBI80627.1| putative flagellar motor protein [Bartonella sp. 1-1C] Length = 448 Score = 293 bits (750), Expect = 4e-77, Method: Composition-based stats. Identities = 79/381 (20%), Positives = 152/381 (39%), Gaps = 19/381 (4%) Query: 31 VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTI 90 P VRSLQ D+ + G +K ++ E G + V+ D N+ A+ IY Sbjct: 62 EPVHLVRSLQNLQDKIISGQEEELQKQLQLLGEIGDKFLTFDASVWKDKNNLYALLIYLF 121 Query: 91 ISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKE---LSKIKDKDNTRGIVP 147 + VV ++ K KG ++ Y S + K L++ + + Sbjct: 122 NGGNPRVVQSILEKYGKGVISENVMDGALAYASHKKTTFLKTYTQLTEEDIRSIPPALFA 181 Query: 148 YLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEIT-QNEVGERAFGYIR 206 + L ++ A+ D VRL +PGT EE A+R L++ + IR Sbjct: 182 SVVLSTVVNIIEKDPALALKQLDQVRLFAPGTLFEEGAIRRELKVASMLGEIDLLALLIR 241 Query: 207 AYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVI 266 YV +F S Y F + L KL + + +++ + Q Y+ +++ ++I Sbjct: 242 HYVHRFWKSPYAYDFWHEFIPAVLRLDEKLSIDQLEALLAYAPTKVQFMAYMAVSRAALI 301 Query: 267 SGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLME 326 + + L+ ++ + + D +++LY + + + NI Y L E Sbjct: 302 DARMEKAKLSAQKALTLAHEIGV-DDTSVRLYYAMSLAGSIAAQEALQMIQNIIYKDLSE 360 Query: 327 QDRYLKKASEIIMSEIGKSLID---------IDFEHIQKDLLL-----DKKEPRHTNVSM 372 +DR+L A++ + + +D + ++L L DK+ + + Sbjct: 361 KDRFLFIAAQAVAQRVISFPLDVLKKKNTQIVSQPQSHEELKLTLEKDDKQNNTTSLIEA 420 Query: 373 GIESFIKKNRSQIESIDVLLA 393 ++ FI+ + +I ID LL Sbjct: 421 EMKQFIQHTQEKINEIDQLLG 441 >gi|319403974|emb|CBI77562.1| putative flagellar motor protein [Bartonella rochalimae ATCC BAA-1498] Length = 446 Score = 290 bits (741), Expect = 4e-76, Method: Composition-based stats. Identities = 80/381 (20%), Positives = 152/381 (39%), Gaps = 19/381 (4%) Query: 31 VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTI 90 P VRSLQ D+ + G +K ++ E G + V+ D N+ A+ IY Sbjct: 60 EPVHLVRSLQNLQDKIISGQEEELQKQLQLLGEIGDKFLTFDASVWKDKNNLYALLIYLF 119 Query: 91 ISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKE---LSKIKDKDNTRGIVP 147 + VV ++ K KG ++ Y S + K L++ + + Sbjct: 120 NGGNPRVVQSILEKYGKGVISENVMDGALAYASHKKTTFLKTYTQLTEEDIRSIPPALFA 179 Query: 148 YLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEIT-QNEVGERAFGYIR 206 + L ++ A+ D VRL +PGT EE A+R L++ + IR Sbjct: 180 SVVLSTVVNIIEKDPALALKQLDQVRLFAPGTLFEEGAIRRELKVASMLGEIDLLALLIR 239 Query: 207 AYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVI 266 YV +F S Y F + L KL + + +++ + Q Y+ +++ ++I Sbjct: 240 HYVHRFWKSPYAYDFWHEFIPAVLRLDEKLSIDQLEALLAYAPTKVQFMAYMAVSRAALI 299 Query: 267 SGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLME 326 + + L+ ++ + + D +++LY + + + NI Y L E Sbjct: 300 DARMEKAKLSAQKALTLAHEIGV-DDTSVRLYYAMSLSGSIAAQEALQMIQNIIYKDLSE 358 Query: 327 QDRYLKKASEIIMSEIGKSLID---------IDFEHIQKDLLL-----DKKEPRHTNVSM 372 +DR+L A++ + + +D K+L L DK++ + + Sbjct: 359 KDRFLFIAAQAVAQRVVSFPLDVLKEKNTQIASQPQSHKELKLTLEKDDKQKNTASLIEA 418 Query: 373 GIESFIKKNRSQIESIDVLLA 393 ++ FI+ + +I ID LL Sbjct: 419 EMKQFIQHTQEKINEIDQLLG 439 >gi|254502667|ref|ZP_05114818.1| hypothetical protein SADFL11_2706 [Labrenzia alexandrii DFL-11] gi|222438738|gb|EEE45417.1| hypothetical protein SADFL11_2706 [Labrenzia alexandrii DFL-11] Length = 399 Score = 288 bits (738), Expect = 8e-76, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 127/340 (37%), Gaps = 5/340 (1%) Query: 15 DVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMD 74 V F T P++ VR+LQ A ++ G+ S ++ + ++ Sbjct: 14 AVVFFADQAMANQATKEPFEMVRALQSAQEQVASGNDSAAAMQRALLAKMDEIFLQLPLE 73 Query: 75 VFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELS 134 + D RN A I+ + + VV L+ D+ ++ A Y G+ E+ L+ Sbjct: 74 AWQDPRNARASVIHLLSGGNPEVVRHLLTLTPAPVIDLNLMEASLAYVEGREEDMLTRLA 133 Query: 135 KIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEIT- 193 + + ++ L+ + +A+ L PGT +EE ALR + + Sbjct: 134 DVDPLTLPPSLGGHIALVKAVPYIQTDPVRAMELLQIASLLMPGTLVEEAALRREVLVAG 193 Query: 194 QNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHG---QLKLPDEDIVFTISFFSL 250 ER Y+ ++ S+Y F + + + + + F Sbjct: 194 LVGDIERFRTLSIRYLRRYRASVYSGDFRRRFAIALDTLGFVEDQDKFDLLYGVLEEFED 253 Query: 251 EEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIM 310 + +R +Y+++A+++++ G +I A Q + + + +++Y+ + + Sbjct: 254 DSRRGLYMRLARSALLGGNLQIASKATDQAQMLA-VAGTAEYELLKIYQVATRLNREAVK 312 Query: 311 SLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDID 350 + ++ +L +D A +++ I D Sbjct: 313 PNRDLLWSVNKAALTPEDLDFLYAVNTVLNSIRHFPDPPD 352 >gi|319405417|emb|CBI79036.1| putative flagellar motor protein [Bartonella sp. AR 15-3] Length = 434 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 77/381 (20%), Positives = 150/381 (39%), Gaps = 19/381 (4%) Query: 31 VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTI 90 P VRSLQ D+ + G +K +++E G + ++ D N+ A+ IY Sbjct: 48 EPVHLVRSLQNLQDKIISGQEKELQKQLQLLEEIGDKFLTFDSSIWKDKNNLYALLIYLF 107 Query: 91 ISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQL---EESSKELSKIKDKDNTRGIVP 147 + VV ++ K KG I+ Y S + ++ +L+ + + Sbjct: 108 NGGNPRVVQSILEKYGKGVIPQNIIDDALAYVSHKKNAFLKAYTQLTVKDVQSIPPALFA 167 Query: 148 YLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGYIR 206 + L ++ A++ D VRL +PGT EE A+R L++ + IR Sbjct: 168 SIVLSTVVNIIEKDPVLALNTLDQVRLFAPGTLFEEGAIRRELKVASILGEIDLMALLIR 227 Query: 207 AYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVI 266 YV +F S Y F + L KL E + + + + + Y+ +++ ++I Sbjct: 228 HYVHRFWKSPYACDFWYEFIPAILRVDEKLSIEQLETLLVYAPTKVRFMTYMAVSRAALI 287 Query: 267 SGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLME 326 + + ++ ++ + + D + LY + + + NI Y L E Sbjct: 288 DARMEKAQISAQKALTLAREIGV-DDTSAHLYYAMSLAGSIAAEEALQMIQNIVYKDLSE 346 Query: 327 QDRYLKKASEIIMSEIGKSLIDI-----DFEHIQKD---------LLLDKKEPRHTNVSM 372 +DR+L A++ + + + I + +Q K++ + + Sbjct: 347 KDRFLFIAAQAVAQRVVSFPLGILEKKKEKLALQPQSYEELKLTLEKDAKQQNTISPIET 406 Query: 373 GIESFIKKNRSQIESIDVLLA 393 I+ FI+ R +I ID LL Sbjct: 407 EIKEFIQHTREKINEIDQLLG 427 >gi|218675466|ref|ZP_03525135.1| chemotaxis protein [Rhizobium etli GR56] Length = 239 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 1/239 (0%) Query: 56 KIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIV 115 ++ +LR ++ D+RN+DA IY + + ++ LIA D GYFD + Sbjct: 1 MQRFMLGTIDERLRTADTSIYDDDRNVDAALIYAMSGGNPQTLEYLIAHDVNGYFDNRVT 60 Query: 116 YALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLT 175 L+KY +G+ +K L + + + I PYL L+ G ++ A+ +D RL Sbjct: 61 DVLRKYLTGKGLLVAKTLEETAREYRDKKIGPYLALIGGNVLIATKPTDALDLYDQARLA 120 Query: 176 SPGTFLEEIALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 +PGT LEE ALR + I + + ++ Y + Y +F HS Y F + ++ + Sbjct: 121 APGTILEEAALRRSVAICVDKGMLDKGLAYSQRYARRFLHSPYASQFADLFVKLVVAHDR 180 Query: 235 KLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLA 293 + +D+V +SF QR +YL+IA+ + ISGK ++ +A+ +++ + D Sbjct: 181 DVKPQDVVDILSFMDAPRQREVYLRIARAAAISGKPELARMAVDRVQALGAGTDNAFGP 239 >gi|319898652|ref|YP_004158745.1| flagellar motor protein [Bartonella clarridgeiae 73] gi|319402616|emb|CBI76161.1| putative flagellar motor protein [Bartonella clarridgeiae 73] Length = 428 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 80/383 (20%), Positives = 155/383 (40%), Gaps = 21/383 (5%) Query: 31 VPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTI 90 P Q VRSLQ D+ + G + ++ +++E G + DV+ D+ N+ A+ IY Sbjct: 40 EPIQFVRSLQNLQDKIISGQEEVLQEQLQLLEEIGDKFLTFDSDVWKDDNNLYALLIYLF 99 Query: 91 ISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLE---ESSKELSKIKDKDNTRGIVP 147 + VV ++ K KG I+ Y S + ++ +L++ + + Sbjct: 100 NGGNPRVVQIILEKYGKGVISQNIMDCALAYASHKRAAFVKAYTQLTEEDVRSIPPALFA 159 Query: 148 YLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGYIR 206 + L ++ A+ D +RL +PGT EE A+R L++ + +R Sbjct: 160 SVVLSTVVNIIEKDPILALKQLDQIRLFAPGTLFEEGAIRRELKVASILGETDLLALLVR 219 Query: 207 AYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVI 266 Y +F S Y F L KL E + +S+ + Q Y+++++ ++I Sbjct: 220 HYAHRFWKSPYAHDFWHEFTPAILQIDEKLSVEQLETLVSYAPTKVQFITYMEVSRAALI 279 Query: 267 SGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLME 326 + + L+ ++ + +D D + +LY + + + NI Y L + Sbjct: 280 DARMEKAQLSAQKALTLAHEIDV-DDTSARLYYAMSLAGSITAQESIQMLQNITYKDLSK 338 Query: 327 QDRYLKKASEIIMSEIGKSLIDIDFE-------HIQKDLLL---------DKKEPRHTNV 370 +DR+L A++ + + S + E Q L K++ + + Sbjct: 339 KDRFLFTAAQAVAKRVISSPLGDQKEKKAQVTLQPQSQGELKLILELEKDAKQQNTISPI 398 Query: 371 SMGIESFIKKNRSQIESIDVLLA 393 + FI+ R +I ID LL Sbjct: 399 EAEMNQFIQNTREKINEIDQLLG 421 >gi|90418367|ref|ZP_01226279.1| putative chemotaxis protein motC [Aurantimonas manganoxydans SI85-9A1] gi|90338039|gb|EAS51690.1| putative chemotaxis protein motC [Aurantimonas manganoxydans SI85-9A1] Length = 420 Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats. Identities = 70/373 (18%), Positives = 153/373 (41%), Gaps = 14/373 (3%) Query: 27 VRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVW 86 R +PY+ VRS+Q D+ RG+ + + +++ G +V+ D RN+ A Sbjct: 56 ERAPMPYEIVRSVQFLQDQVARGNGAAIRVQAQLLRRYGPTFLEQPPEVWTDPRNLRAAA 115 Query: 87 IYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIV 146 ++ + +V+ +++ T + A++ Y + ++ L I + + Sbjct: 116 LFVLSGGPPAVLRGILSTATIDGDERALLDGALAYVENRARDARAALVPIDVSEMDTALA 175 Query: 147 PYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGYI 205 L+L + + + + A+H + V L +PGT LEE ALR + + ++ A Y Sbjct: 176 AQLNLAVAQLLQKDAPADALHRLEQVMLAAPGTLLEEAALRMGVLLAEDIGSHAAADRYA 235 Query: 206 RAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFT---ISFFSLEEQRAIYLKIAQ 262 R Y +F S Y +F + + + DE + + +++ AI+L +A+ Sbjct: 236 RQYFDRFADSAYAGNFRARFSAVYAARPAETKDETVATIDNATARIPDDQRLAIFLAVAR 295 Query: 263 NSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYY 322 +++ G + + + + D LY+ + D + + + I Sbjct: 296 RALVGGNLPLAAAMATEALESGNAVP-ADSQRALLYKTAATLTTGDPVEARVALEAIDVA 354 Query: 323 SLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNR 382 +L DR L +A+ ++SE+ K L+ + +D E + + + Sbjct: 355 TLHPADRKLHEAAYEVLSEMRKPLMAAN---------IDPAERYGPQPPAEQSAVLTRGA 405 Query: 383 SQIESIDVLLAEA 395 + ++++ L A Sbjct: 406 ALLDAVRGDLKRA 418 >gi|315122281|ref|YP_004062770.1| chemotaxis protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495683|gb|ADR52282.1| chemotaxis protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 397 Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 237/399 (59%), Positives = 312/399 (78%), Gaps = 5/399 (1%) Query: 1 MNQKYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDI 60 MNQK LI M++ M+VF SFA +QDL + PY +R LQR LD +++ +KKI DI Sbjct: 1 MNQKCLIMIMIMVMEVFPSFAMNQDLENSNAPYARIRFLQRVLDSSLQEGGYSKKKILDI 60 Query: 61 VKETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKK 120 V+E G+QLR T+M F D+RN+DAV+IYTIIS+++S+++ LIA D KGYFD++IV+AL+K Sbjct: 61 VEEVGLQLRTTNMSFFADHRNVDAVFIYTIISENISILNYLIANDKKGYFDLSIVHALRK 120 Query: 121 YFSGQLEESSKELSKIKDKDNT--RGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPG 178 YF+G+ EES K L+ IKD D+ +GI PY +LL+GRAMM +S++A+ FFD VRLTS G Sbjct: 121 YFAGEFEESIKALNTIKDNDHIHIKGIEPYFYLLMGRAMMKLNSKEAIQFFDRVRLTSSG 180 Query: 179 TFLEEIALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLP 237 T LEE++LRNLLEIT N + E FGYIR Y+ QF+HSIYKD+FI++LLRFFLH ++KL Sbjct: 181 TALEEMSLRNLLEITLNQGIEEHVFGYIRDYIRQFYHSIYKDNFINLLLRFFLHSKIKLQ 240 Query: 238 DEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQL 297 D+DIVF +SF ++EQRAIY KIAQ++VI GKRKIG LAI+QLK ++ +LD++DLATI L Sbjct: 241 DKDIVFVMSFLEVDEQRAIYFKIAQHAVIFGKRKIGLLAIQQLKEMVYKLDHRDLATIWL 300 Query: 298 YENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKD 357 Y +++NIPFVD + LQRS CNIP YSLME+DR LKK+SE+I+SE+ KS I+IDF+HI K Sbjct: 301 YNDLMNIPFVDTVLLQRSLCNIPEYSLMEKDRNLKKSSEVILSEMRKSSINIDFDHIDKY 360 Query: 358 LLLDKKEPRHTNVSMGIESFIKKNRSQIESIDVLLAEAR 396 L+LD K+ HT+ +ESFIKKNR +IE IDV L R Sbjct: 361 LVLDTKQHEHTH--WNLESFIKKNRQKIEVIDVYLEGTR 397 >gi|114705810|ref|ZP_01438713.1| probable chemotaxis protein precursor [Fulvimarina pelagi HTCC2506] gi|114538656|gb|EAU41777.1| probable chemotaxis protein precursor [Fulvimarina pelagi HTCC2506] Length = 458 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 68/353 (19%), Positives = 143/353 (40%), Gaps = 6/353 (1%) Query: 25 DLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDA 84 R +P++ +RSLQ D+A RG+ + + +++ G L A DV+ D RN+ A Sbjct: 97 QTEREPMPFEVIRSLQYLQDQAARGNKAALQVQRRLLRRFGPSLSARSSDVWTDKRNVRA 156 Query: 85 VWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRG 144 V ++ + + + +L ++ + Y +++E+ +LS I Sbjct: 157 VVLFVLSGGPSAPLSELYRAGVFEEKHRPLIEGVLAYADNRMDEAEAKLSTIDLSREETI 216 Query: 145 IVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQ-NEVGERAFG 203 + L + + ++ + V L +PGT L+E ALR + + + E+A Sbjct: 217 FAAQVRLALAQLREAEDPAGSLMLLEQVMLAAPGTLLDEAALRLGVLLAENAGETEKADR 276 Query: 204 YIRAYVTQFHHSIYKDHFISVLLRFF---LHGQLKLPDEDIVFTISFFSLEEQRAIYLKI 260 Y R Y ++ S+Y +F + + G + + + T+ +++ A+YL + Sbjct: 277 YARQYFDRYAASVYAGNFRTRFSAVYSDRPKGSEEATLDTLAGTLRLLPDDQKLAMYLSV 336 Query: 261 AQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIP 320 A+ +++ G ++ A ++ I D D LYE + +D + + I Sbjct: 337 ARRALVGGNLELAAEASREALTIEAA-DPADRQRALLYEVASTLSALDEGEILATLGAIE 395 Query: 321 YYSLMEQDRYLKKASEIIMSEIGKSLI-DIDFEHIQKDLLLDKKEPRHTNVSM 372 L D LK+A+ ++ I + + L + + + Sbjct: 396 DEQLHPSDLALKEAALDVVDAIREPAEISASAGNTDPALDNQTLKRAASLIDA 448 >gi|170741407|ref|YP_001770062.1| chemotaxis protein [Methylobacterium sp. 4-46] gi|168195681|gb|ACA17628.1| putative chemotaxis protein precursor [Methylobacterium sp. 4-46] Length = 445 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 63/369 (17%), Positives = 131/369 (35%), Gaps = 14/369 (3%) Query: 33 YQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTIIS 92 + VR+LQ D RG ++ +L + + N+ A + + Sbjct: 85 VELVRTLQLLQDRIARGGTQAHLAQRQLIAHIEQRLIGLEPETWGKPANVQAAVTFALAG 144 Query: 93 QDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLL 152 V+ +I + + ++ + G+ ++ L+K+ + + + L Sbjct: 145 GGPGVLRRVIEAGSLPDSEAPLLQGALAFLEGRERDARTVLTKLDAQTLPASLGGQVALA 204 Query: 153 IGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLE-ITQNEVGERAFGYIRAYVTQ 211 ++ + QA+ D RL +PGT +EE ALR + + Q R Y+ + Sbjct: 205 QSALVVRENPDQALRLLDLARLLAPGTLVEEGALRREVFVLAQAGNIPRFEALSIQYLRR 264 Query: 212 FHHSIYKDHFISVLLRFFLH---GQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISG 268 F HS+Y +F G + + ++ E + +YL +A+ +V G Sbjct: 265 FRHSVYAGNFRQRFAAALTRLKYGDDPVRIGRLEAMLAEIEPEGRGDLYLLVARAAVEQG 324 Query: 269 KRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRS-TCNIPYYSLMEQ 327 + + A + ++ A +LY I D + ++ +L Sbjct: 325 EMRAAVFAANRAAALV-EAGSVRAAQARLYRAAAAIATPDGFDGAYAVLRSLDRAALPSA 383 Query: 328 DRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQIES 387 D L A+ ++I + L ++ + P+ I + + IE Sbjct: 384 DAGLLDAALSTAAQIRRDLPPAPATPPEEAADGKRPVPQA--------KTIARAQEAIEQ 435 Query: 388 IDVLLAEAR 396 ID ++ R Sbjct: 436 IDDMMRRTR 444 >gi|218528677|ref|YP_002419493.1| chemotaxis protein [Methylobacterium chloromethanicum CM4] gi|218520980|gb|ACK81565.1| chemotaxis protein [Methylobacterium chloromethanicum CM4] Length = 460 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 110/328 (33%), Gaps = 6/328 (1%) Query: 32 PYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTII 91 P + R+LQ D RG ++ +L A + + + N+ A + + Sbjct: 98 PVELTRTLQLLQDRIARGSTQAHLAQRQLLGHIEQRLIALDPESWAEAENVRAAVTFALA 157 Query: 92 SQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHL 151 + ++ + + Y G+ E+ +L+ I + G+ L L Sbjct: 158 GGGPGALRVILRSGKVPETEQPLALGALAYLEGREREARAKLAGIDPRTMPAGLAGQLAL 217 Query: 152 LIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLE-ITQNEVGERAFGYIRAYVT 210 M+ + +++ D RL +PGT +EE ALR + + Q R Y+ Sbjct: 218 TQSALMVRDAPVKSLELLDLARLLAPGTLVEEGALRRQIFVVAQGGDARRFEALAIQYLR 277 Query: 211 QFHHSIYKDHFISVLLRFFLHGQLKLPDED---IVFTISFFSLEEQRAIYLKIAQNSVIS 267 +F S+Y +F + + E +R +YL +A+ + Sbjct: 278 RFRRSVYAGNFRQRFAGALTRLDFDSDRTRIASLERMLDEIEPEGRRDLYLLVARAGLEQ 337 Query: 268 GKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVD-IMSLQRSTCNIPYYSLME 326 G+R+ + ++ + D + A +LY I + + + Sbjct: 338 GRRETALFSAERAMGLAAP-DSQPAAQARLYRGAALIVADGRFEEGYEALRGLERADFVP 396 Query: 327 QDRYLKKASEIIMSEIGKSLIDIDFEHI 354 D L A+ +I + Sbjct: 397 TDAELLDAALSTARQIRTPSAVAEAVAT 424 >gi|188579879|ref|YP_001923324.1| chemotaxis protein [Methylobacterium populi BJ001] gi|179343377|gb|ACB78789.1| putative chemotaxis protein precursor [Methylobacterium populi BJ001] Length = 429 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 110/317 (34%), Gaps = 6/317 (1%) Query: 32 PYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTII 91 P + R+LQ D RG ++ +L + + + N+ A + + Sbjct: 67 PVELTRTLQLLQDRIARGSTQAHLAQRQLLGHIEQRLIELDPEAWAEAENVRAAVTFALA 126 Query: 92 SQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHL 151 + + L+ + + Y G+ E+ +L+ I + G+ L L Sbjct: 127 GGGPAALRVLLKSGKAPEAEQPLALGALAYLEGREREARAKLAGIDPRTMPAGLAGQLAL 186 Query: 152 LIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLE-ITQNEVGERAFGYIRAYVT 210 M+ + +++ D RL +PGT +EE ALR + + Q R Y+ Sbjct: 187 TQSALMVREAPAKSLELLDLARLLAPGTLVEEGALRRQIFVVAQGGDARRFEALAIQYLR 246 Query: 211 QFHHSIYKDHFISVLLRFFLHGQLKLPDED---IVFTISFFSLEEQRAIYLKIAQNSVIS 267 +F S+Y +F + + E +R +YL +A+ + Sbjct: 247 RFRRSVYAGNFRQRFAGALTRLDFDSDRTRIASLERMLDEIEPESRRDLYLLVARAGLEQ 306 Query: 268 GKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVD-IMSLQRSTCNIPYYSLME 326 G+R+ A ++ + D + A +LY I + ++ L Sbjct: 307 GRRETALFAAERAMGLAAP-DSRPAAQARLYRGAALIVADGRFEEGTETLRSLDRADLAA 365 Query: 327 QDRYLKKASEIIMSEIG 343 D L A+ +I Sbjct: 366 PDAELLDAALSTARQIR 382 >gi|218509334|ref|ZP_03507212.1| chemotaxis protein [Rhizobium etli Brasil 5] Length = 217 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 1/217 (0%) Query: 56 KIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIV 115 ++ +LR ++ D+RN+DA IY + + ++ LIA D GYFD + Sbjct: 1 MQRFMLGTIDERLRTADTSIYDDDRNVDAALIYAMSGGNPQTLEYLIAHDVNGYFDNRVT 60 Query: 116 YALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLT 175 L+KY SG+ +K L + + + I PYL L+ G ++ A+ +D RL Sbjct: 61 DVLRKYLSGKGLLVAKTLEETAREYRDKKIGPYLALIGGNVLIATKPTDALDLYDQARLA 120 Query: 176 SPGTFLEEIALRNLLEITQN-EVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 +PGT +EE ALR + I + + ++ Y + Y +F HS Y F + ++ + Sbjct: 121 APGTIVEEAALRRSVAICVDKGLLDKGLAYSQRYARRFLHSPYASQFADLFVKLVVAHDR 180 Query: 235 KLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRK 271 + +D+V +SF QR +YL+IA+ + ISGK + Sbjct: 181 DVRPQDVVDILSFMDAPRQREVYLRIARAAAISGKPE 217 >gi|240137208|ref|YP_002961677.1| chemotaxis protein MotC [Methylobacterium extorquens AM1] gi|240007174|gb|ACS38400.1| chemotaxis protein MotC [Methylobacterium extorquens AM1] Length = 459 Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 110/328 (33%), Gaps = 6/328 (1%) Query: 32 PYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTII 91 P + R+LQ D RG ++ +L A + + + N+ A + + Sbjct: 97 PVELTRTLQLLQDRIARGSTQAHLAQRQLLGHIEQRLIALDPESWAEAENVRAAVTFALA 156 Query: 92 SQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHL 151 + ++ + + Y G+ E+ +L+ I + G+ L L Sbjct: 157 GGGPGALRVILRSGKVPEAEQPLALGALAYLEGREREARAKLAGIDPRTMPAGLAGQLAL 216 Query: 152 LIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLE-ITQNEVGERAFGYIRAYVT 210 M+ + +++ D RL +PGT +EE ALR + + Q R Y+ Sbjct: 217 TQSALMVRDAPVKSLELLDLARLLAPGTLVEEGALRRQIFVVAQGGDARRFEALAIQYLR 276 Query: 211 QFHHSIYKDHFISVLLRFFLHGQLKLPDED---IVFTISFFSLEEQRAIYLKIAQNSVIS 267 +F S+Y +F + + E +R +YL +A+ + Sbjct: 277 RFRRSVYAGNFRQRFAGALTRLDFDSDRTRIASLERMLDEIEPEGRRDLYLLVARAGLEQ 336 Query: 268 GKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVD-IMSLQRSTCNIPYYSLME 326 G+R+ + ++ + D + A +LY I + + + Sbjct: 337 GRRETALFSAERAMGLAAP-DSQPAAQARLYRGAALIVADGRFEEGYEALRGLDRTDFIP 395 Query: 327 QDRYLKKASEIIMSEIGKSLIDIDFEHI 354 D L A+ +I + Sbjct: 396 TDAELLDAALSTARQIRTPSAVAEAAAT 423 >gi|163850074|ref|YP_001638117.1| chemotaxis protein [Methylobacterium extorquens PA1] gi|163661679|gb|ABY29046.1| putative chemotaxis protein precursor [Methylobacterium extorquens PA1] Length = 460 Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 110/328 (33%), Gaps = 6/328 (1%) Query: 32 PYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTII 91 P + R+LQ D RG ++ +L A + + + N+ A + + Sbjct: 98 PVELTRTLQLLQDRIARGSTQAHLAQRQLLGHIEQRLIALDPESWAEAENVRAAVTFALA 157 Query: 92 SQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHL 151 + ++ + + Y G+ E+ +L+ I + G+ L L Sbjct: 158 GGGPGALRVILRSGKVPEAEQPLALGALAYLEGREREARAKLAGIDPRTMPAGLAGQLAL 217 Query: 152 LIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLE-ITQNEVGERAFGYIRAYVT 210 M+ + +++ D RL +PGT +EE ALR + + Q R Y+ Sbjct: 218 TQSALMVRDAPVKSLELLDLARLLAPGTLVEEGALRRQIFVVAQGGDARRFEALAIQYLR 277 Query: 211 QFHHSIYKDHFISVLLRFFLHGQLKLPDED---IVFTISFFSLEEQRAIYLKIAQNSVIS 267 +F S+Y +F + + E +R +YL +A+ + Sbjct: 278 RFRRSVYAGNFRQRFAGALTRLDFDSDRTRIASLERMLDEIEPEGRRDLYLLVARAGLEQ 337 Query: 268 GKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVD-IMSLQRSTCNIPYYSLME 326 G+R+ + ++ + D + A +LY I + + + Sbjct: 338 GRRETALFSAERAMGLAAP-DSQPAAQARLYRGAALIVADGRFEEGYEALRGLDRTDFVP 396 Query: 327 QDRYLKKASEIIMSEIGKSLIDIDFEHI 354 D L A+ +I + Sbjct: 397 TDAELLDAALSTARQIRTPSAVAEAAAT 424 >gi|254559219|ref|YP_003066314.1| chemotaxis protein MotC [Methylobacterium extorquens DM4] gi|254266497|emb|CAX22261.1| chemotaxis protein MotC [Methylobacterium extorquens DM4] Length = 459 Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 110/328 (33%), Gaps = 6/328 (1%) Query: 32 PYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTII 91 P + R+LQ D RG ++ +L A + + + N+ A + + Sbjct: 97 PVELTRTLQLLQDRIARGSTQAHLAQRQLLGHIEQRLIALDPETWAEAENVRAAVTFALA 156 Query: 92 SQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHL 151 + ++ + + Y G+ E+ +L+ I + G+ L L Sbjct: 157 GGGPGALRVILRSGKVPEAEQPLALGALAYLEGREREARAKLAGIDPRTMPAGLAGQLAL 216 Query: 152 LIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLE-ITQNEVGERAFGYIRAYVT 210 M+ + +++ D RL +PGT +EE ALR + + Q R Y+ Sbjct: 217 TQSALMVRDAPVKSLELLDLARLLAPGTLVEEGALRRQIFVVAQGGDARRFEALAIQYLR 276 Query: 211 QFHHSIYKDHFISVLLRFFLHGQLKLPDED---IVFTISFFSLEEQRAIYLKIAQNSVIS 267 +F S+Y +F + + E +R +YL +A+ + Sbjct: 277 RFRRSVYAGNFRQRFAGALTRLDFDSDRTRIASLERMLDEIEPEGRRDLYLLVARAGLEQ 336 Query: 268 GKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVD-IMSLQRSTCNIPYYSLME 326 G+R+ + ++ + D + A +LY I + + + Sbjct: 337 GRRETALFSAERAMGLAAP-DSQPSAQARLYRGAALIVADGRFEEGYEALRGLDRTDFVP 395 Query: 327 QDRYLKKASEIIMSEIGKSLIDIDFEHI 354 D L A+ +I + Sbjct: 396 TDAELLDAALSTARQIRTPSAIAEAAAT 423 >gi|300024595|ref|YP_003757206.1| hypothetical protein Hden_3090 [Hyphomicrobium denitrificans ATCC 51888] gi|299526416|gb|ADJ24885.1| hypothetical protein Hden_3090 [Hyphomicrobium denitrificans ATCC 51888] Length = 424 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 60/367 (16%), Positives = 129/367 (35%), Gaps = 9/367 (2%) Query: 34 QCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTIISQ 93 + + L D ++GD ++ E +RA + + + ++Y + Sbjct: 62 RLLARLGTVQDIVVQGDEGALADQGRLLSEISAVVRAFEKSDWDNYAQVRDAFVYVLSGG 121 Query: 94 DLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLI 153 D V+ L DT+ D + + KY GQ + K + + + +V L Sbjct: 122 DYGVLKPLANDDTRHEADRTLAQGIIKYAQGQTSAARKLWADVDPRSVDVSLVGPFALAR 181 Query: 154 GRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLE-ITQNEVGERAFGYIRAYVTQF 212 + +A+ D RL P T +EE A+R + + +RA + Y+ ++ Sbjct: 182 ASLYIGNDDAKAIALLDEARLACPHTAIEEAAVRREIPVLVSKGETQRAMLLLTDYLRRY 241 Query: 213 HHSIYKDH-FISVLLRFFLHGQLKLPD--EDIVFTISFFSLEEQRAIYLKIAQNSVISGK 269 SIY F + D E + S + + + L +A + +G+ Sbjct: 242 GRSIYAWKLFRDFSAAAAKRDEFDGRDMVEKLTEATSTADRQSRIDLLLAMAAAGLPAGR 301 Query: 270 RKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDR 329 + A + + +DL LY+ N P + I L D Sbjct: 302 ISLAQAAANEALSLKPD-SAEDLDRAMLYQAAANAPSTRAAEALSALRQITADRLTGNDV 360 Query: 330 YLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQIESID 389 +++ + I + ++ + + + + + VS +K + IE + Sbjct: 361 EIREVAGYIAQTVTQNKFAPASDARNAETEVSRAATELSRVSTA----VKSADAAIEEAN 416 Query: 390 VLLAEAR 396 ++++ + Sbjct: 417 MIMSGTK 423 >gi|304392496|ref|ZP_07374436.1| putative chemotaxis protein [Ahrensia sp. R2A130] gi|303295126|gb|EFL89486.1| putative chemotaxis protein [Ahrensia sp. R2A130] Length = 389 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 56/376 (14%), Positives = 132/376 (35%), Gaps = 22/376 (5%) Query: 25 DLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQL----RATHMDVFVDNR 80 ++ + +R+L D GD + +++ + + D ++ R Sbjct: 26 EISDPLPATTMLRTLHAVQDRIATGDAASLPLQKHLLELIAPSIAGLAKVKTPDALLEER 85 Query: 81 NIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKD 140 N A +Y + +A A+ +A+ G+ + + KI+ Sbjct: 86 NT-AFILYALSGGAADTARGALAVIDHDEPLRALAHAVADNIGGRRVRALRRFLKIEMTS 144 Query: 141 NTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQNE-VGE 199 +VPY+ L G+ + + V +PGT LEE ALR L++ + Sbjct: 145 LPVSLVPYVALAKGQLLAQSEPDAGIVLLSIVGQLAPGTLLEEAALRRKLQLALRGKMAA 204 Query: 200 RAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLK 259 R + R Y +F S Y+ F L + + + +D+ ++ + + ++ Sbjct: 205 RFYAAARQYTYRFIGSPYRASFAQALQKAAV--EFPEHGDDLDAVLALMPENLRSPMQVR 262 Query: 260 IAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNI 319 IA+ ++++G+ + ++++ + E + + D+ ++ ++ Sbjct: 263 IARMALLAGQDGLARKMVQRVDIEGQVGEVARRTQSLFVEAVSRLAGKDVKEQRKILVSL 322 Query: 320 PYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIK 379 L +D+ L + I I + Q + + Sbjct: 323 DRRFLNAEDKKLVDVAVAIADTIVSPVSRAAGTQKQS--------------TTDRLPVVG 368 Query: 380 KNRSQIESIDVLLAEA 395 + ++D LL+E+ Sbjct: 369 LANETLAAVDALLSES 384 >gi|312115286|ref|YP_004012882.1| hypothetical protein Rvan_2568 [Rhodomicrobium vannielii ATCC 17100] gi|311220415|gb|ADP71783.1| hypothetical protein Rvan_2568 [Rhodomicrobium vannielii ATCC 17100] Length = 386 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 62/387 (16%), Positives = 134/387 (34%), Gaps = 14/387 (3%) Query: 14 MDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHM 73 + + S A+ Q R +R R D R S + + + LR Sbjct: 10 VALVTSVASTQAAEREQALIMDLRDDARRFDAVARTQASSMEM-AEARERFAAHLRDAAH 68 Query: 74 DVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKEL 133 ++ + I+ + + + D G + ++ + + SG + L Sbjct: 69 LKLKNDEFLKFAEIFVLSGGGVEHI-KPWKDDQPGEMERNLIRGIVAHGSGDTTRAEAIL 127 Query: 134 SKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEIT 193 I + +L L+ +Q+A ++ RL PGT +EE ALR + + Sbjct: 128 LAIDARSLDAVRGGHLALVQALLAARTDAQRAFSYYGLARLLLPGTLVEEAALRQSIVLA 187 Query: 194 QNEV-GERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEE 252 ++ + AY+ +F S + + ++ + + + + + Sbjct: 188 GEKLRAQEFAEAALAYIRRFDTSTFAGDAETRIVSYLPRFEDADGAAILERMLEARPMGF 247 Query: 253 QR---AIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDI 309 R ++AQ V+SG+R + LA + ++ D + LY+ + I Sbjct: 248 GRCPVCFLTEVAQRGVLSGRRSLVLLATGKGLALV-ENDAPQKQRLLLYQAAVEIVTDKY 306 Query: 310 MSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTN 369 + ++ S D L AS + ++ ++ + E + R N Sbjct: 307 EGASDTLKSLNPESFDADDAALLSASLQLARKLRETPKPLSDE-------VALAGNRGGN 359 Query: 370 VSMGIESFIKKNRSQIESIDVLLAEAR 396 E + + R+ + + D++L R Sbjct: 360 RVFLGEKRVMEARAAVANADLVLQRER 386 >gi|296447980|ref|ZP_06889886.1| chemotaxis protein [Methylosinus trichosporium OB3b] gi|296254490|gb|EFH01611.1| chemotaxis protein [Methylosinus trichosporium OB3b] Length = 377 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 127/344 (36%), Gaps = 7/344 (2%) Query: 33 YQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTIIS 92 VR L D RG + + IP V+ + D + + N A Y + Sbjct: 26 VDLVRKLTGLQDGMARGAATARAAIPAQVERIQTAIATAEADSWKERANGRAAATYLLGG 85 Query: 93 QDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLL 152 + + + D ++ A Y G+ ++ ++I K+ + +L L+ Sbjct: 86 GSPRAIRKIFDANLFSDADRPLIDASLAYAEGRSRDAMPMFAQIDPKEQPATLGGHLALV 145 Query: 153 IGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQN-EVGERAFGYIRAYVTQ 211 G ++ + +A D RL P + +EE ALR + + + + R YV Q Sbjct: 146 RGGLLIGSDNARARELLDLARLLMPSSLVEEAALRREVAVVDPLQDAAKFLLLARRYVAQ 205 Query: 212 FHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFS---LEEQRAIYLKIAQNSVISG 268 + S + +F + L +P+ + ++ F + +++ IAQN+++ G Sbjct: 206 YSRSPFARNFWGEARAATIRVALDIPERQLGEFLALFDATPAATRFDLHMTIAQNAILHG 265 Query: 269 KRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQD 328 + + L + + D ++ A + L L D + + SL D Sbjct: 266 RPALAALETDRAATLAD--THQAKARVALNRAALTALGGDFEAAASEFAALDVSSLERGD 323 Query: 329 RYLKKASEIIMSEIGKSLIDIDFE-HIQKDLLLDKKEPRHTNVS 371 + L+ + + S + + +L +++ + + S Sbjct: 324 KELRAVVAGAIDHLRLSPEAAEKTMSARDELPVERAARQALDDS 367 >gi|323139664|ref|ZP_08074706.1| chemotaxis protein [Methylocystis sp. ATCC 49242] gi|322395096|gb|EFX97655.1| chemotaxis protein [Methylocystis sp. ATCC 49242] Length = 386 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 131/364 (35%), Gaps = 14/364 (3%) Query: 35 CVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTIISQD 94 VR L + + GD ++ + + + + + +N+ A IY + Sbjct: 29 MVRDLNGMQNRMVMGDEKARENVARQFDLIERTIMTLEPETWTEEKNVRAAAIYLLCGGA 88 Query: 95 LSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIG 154 + + ++ ++ A +Y GQ +E++ +L + + +L L+ G Sbjct: 89 PTNLREIFDAKFVSDELSPLLEAALRYAEGQ-DEAAAKLMDFDARHFPPILGGHLALVQG 147 Query: 155 RAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQNE-VGERAFGYIRAYVTQFH 213 +++ + +A+ D RL P + +EE ALR + E ++ + YV ++ Sbjct: 148 GSVIGSDNARAIALLDLARLLMPASLVEEAALRREIRAVDPETDADKVSALVNRYVAKYT 207 Query: 214 HSIYKDHFISVLLRFF---LHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKR 270 S Y +F + L I S +++ IYL +++ ++++G+ Sbjct: 208 ASPYAQNFWTELRSIVFSPSINADAELLAKFEGAIEKASTDQRLDIYLLLSRRAILNGRL 267 Query: 271 KIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRY 330 + + ++ D + + I Y NI+ S + + +L +D Sbjct: 268 GEAASKLDKAEQAAD--NPQAHKRIVTYRNIVKSLSKGDASSASNLQDTDLSALTREDSE 325 Query: 331 LKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQIESIDV 390 + K + +++ + K + + I R +E D Sbjct: 326 MLKIASGVLARLEKPAETDRHA-------IGASAAAPEVTANDEPPIIASARVALEKSDE 378 Query: 391 LLAE 394 LL Sbjct: 379 LLKR 382 >gi|218515864|ref|ZP_03512704.1| chemotaxis protein [Rhizobium etli 8C-3] Length = 202 Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 79/198 (39%), Gaps = 29/198 (14%) Query: 227 RFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDR 286 + + + +D+V +SF QR +YL+IA+ + ISGK ++ +A+++++ + Sbjct: 1 KLVVAHDRDVKPQDVVDILSFMDAPRQREVYLRIARAAAISGKPELARMAVERVQSLGAG 60 Query: 287 LDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSL 346 D Y + +P DI ++ I +L +D+ L+ A+ + +I ++ Sbjct: 61 TDNAFGPLADFYGGMAGLPTQDIDRAAKNVSGIDGNALSPRDQALQAAARSVAEQILRAP 120 Query: 347 IDIDFEHI--------------------QKDLLLDKKEPRHTNVSMGIES---------F 377 Q EP V+ +S F Sbjct: 121 DPASLTQASDPNTSHQEITSEKAAAIAMQPGAPGAPPEPVPGGVASTGQSQDTDPSFNAF 180 Query: 378 IKKNRSQIESIDVLLAEA 395 + +RS+++ ID LLA+ Sbjct: 181 VTTSRSKLDEIDGLLAQE 198 >gi|13472588|ref|NP_104155.1| chemotaxis MOTC protein [Mesorhizobium loti MAFF303099] gi|14023334|dbj|BAB49941.1| chemotaxis motc protein [Mesorhizobium loti MAFF303099] Length = 222 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 51/132 (38%) Query: 235 KLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLAT 294 + + + S E ++ IYL+IA+ + I G ++ A + ++ D + Sbjct: 2 SISQDKLADITSMMDPEREKVIYLRIARRAAIDGLSELSAFASARAEQGRDGNTNQGDPR 61 Query: 295 IQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHI 354 +LY ++ + I ++ I L + DR L A++ I E+ + Sbjct: 62 AELYSSLSTVTSGTIEDVRTKLGKIDRSKLSDGDRALLDAAQAIAGEVVAPPASLPGATP 121 Query: 355 QKDLLLDKKEPR 366 L + +P Sbjct: 122 ASAALAPQPKPE 133 >gi|218196737|gb|EEC79164.1| hypothetical protein OsI_19839 [Oryza sativa Indica Group] Length = 1661 Score = 43.1 bits (100), Expect = 0.072, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 11/118 (9%) Query: 34 QCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTIISQ 93 + +RSL A + G +L E + A +V + ++N + I+ + + Sbjct: 504 RLIRSLLEAQN--ADGYTALHLACRRGSAEIVEAIVAYQENVDLLDKNENPPIIFAMAAG 561 Query: 94 DLSVVDDLIAKDTKGYFDIAIVYAL---KKYF---SGQLEESSKEL-SKIKDKDNTRG 144 V L+ + + + L + GQ E + L + Sbjct: 562 SPQCVRALVRR--SSDVNSRLREGLGPTLAHVCAHHGQPECMRELLMAGADPNAVDGE 617 >gi|301118604|ref|XP_002907030.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262108379|gb|EEY66431.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 6248 Score = 43.1 bits (100), Expect = 0.073, Method: Composition-based stats. Identities = 31/288 (10%), Positives = 81/288 (28%), Gaps = 47/288 (16%) Query: 102 IAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFS 161 ++ + + L+ F L + E+ +I+ ++ ++ + L Sbjct: 4568 VSDAEASEEERRAMEVLEASFETNLASAEAEVREIR-REKETELLAQVCALSANKAAEE- 4625 Query: 162 SQQAVHFFDYVRLTSPGTFLE-EIAL-RNLLEITQNEVGERAFGYIRAYVTQFHHSIYKD 219 A+ D RL + E E A + + + +R ++ + S Sbjct: 4626 --AALMLLDAARLEAERVRAEYEAAFTSRVQQPEDDGSVDREIALVQRAHARGVKS---- 4679 Query: 220 HFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQ 279 + + + A+ + ++ + + A ++ Sbjct: 4680 -----------------RRDQLDAETA--------------ARKAALTARLEHKRRAARK 4708 Query: 280 LKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDR---YLKKASE 336 D+ E + ++ + + + E++R L++A E Sbjct: 4709 GDE--SGKTEADIEKALQLEEQQELGAIEHERAVKE-RELDVEAAQEKERLANALREAHE 4765 Query: 337 IIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQ 384 ++I + L H + LD+ R Q Sbjct: 4766 RGAADIERQLAACKQAHDIESTKLDETLRAERARQELALKQRLNARRQ 4813 >gi|222631480|gb|EEE63612.1| hypothetical protein OsJ_18429 [Oryza sativa Japonica Group] Length = 1635 Score = 43.1 bits (100), Expect = 0.081, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 11/118 (9%) Query: 34 QCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTIISQ 93 + +RSL A + G +L E + A +V + ++N + I+ + + Sbjct: 478 RLIRSLLEAQN--ADGYTALHLACRRGSAEIVEAIVAYQENVDLLDKNENPPIIFAMAAG 535 Query: 94 DLSVVDDLIAKDTKGYFDIAIVYAL---KKYF---SGQLEESSKEL-SKIKDKDNTRG 144 V L+ + + + L + GQ E + L + Sbjct: 536 SPQCVRALVRR--SSDVNSRLREGLGPTLAHVCAHHGQPECMRELLMAGADPNAIDGE 591 >gi|330916061|ref|XP_003297277.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1] gi|311330133|gb|EFQ94619.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1] Length = 883 Score = 42.3 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 15/134 (11%), Positives = 46/134 (34%), Gaps = 7/134 (5%) Query: 262 QNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATI----QLYENILNIPFVDIMSLQRSTC 317 + + +R+ A K+ + D + Y + + F + + Sbjct: 424 RQAANRARREAQSNAHKRQRTDNDGVSAPGFKRAKETTDTYTSAGIVFFDPKDAQSKEVR 483 Query: 318 NIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESF 377 ++ + +D K++ + E+ K+ D + + + G E+ Sbjct: 484 DVHKDIMHTRDSQSNKSAAARLKELLKAKADGTSLPEPEQTPDSEPA---LESASGTETP 540 Query: 378 IKKNRSQIESIDVL 391 ++ + +++ +D L Sbjct: 541 VQLGKRKLDEVDDL 554 >gi|300694327|ref|YP_003750300.1| tpr repeat domain [Ralstonia solanacearum PSI07] gi|299076364|emb|CBJ35677.1| conserved hypothethical protein, tpr repeat domain [Ralstonia solanacearum PSI07] Length = 700 Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 64/221 (28%), Gaps = 20/221 (9%) Query: 51 ISLQKKIPDIV---KETGVQLRATHMDVFVDNRNIDAVWIYTII-------SQDLSVVDD 100 + ++ A + + R +DA L V+D Sbjct: 183 AEAHSNLAFLLSAQGRYDEAAAAAQHAIELSPRLVDAYLNLAAAEMGRHRHGAALRVLDG 242 Query: 101 LIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPF 160 L + + + + + +E+ ++ R + L + + Sbjct: 243 LSTFAPQHPAALTARAKVLRQVE-RPDEALA-FARQAVALAPRSAEAHHALAMALQALGQ 300 Query: 161 SSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDH 220 + + HF RL PG EE + + + + A + +F S+ Sbjct: 301 TDEALPHFEQAARL--PGAVAEEALVGRATLLMEAGRRDAALAAFDQALERFPGSV---- 354 Query: 221 FISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIA 261 L D DI + + E+R++ +I+ Sbjct: 355 --QALAGLADARTFTAGDSDIAALEACLAEGERRSLRDRIS 393 >gi|158520052|ref|YP_001527922.1| SpoIID/LytB domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158508878|gb|ABW65845.1| SpoIID/LytB domain [Desulfococcus oleovorans Hxd3] Length = 508 Score = 41.2 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 15/133 (11%) Query: 85 VWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRG 144 V ++ + D L A A + +G+ E+ + D G Sbjct: 4 VLLHAANGGLPAESDFLFA------------QAETQVAAGRYLEAIGLYQTVADTTPDAG 51 Query: 145 IVPYLHLLIGRAMMPFSSQ--QAVHFFDYVRLTSPGTFL-EEIALRNLLEITQNEVGERA 201 LL+G A + Q +A+ +FDY+ PG+ EE R + + + E +A Sbjct: 52 EKARALLLVGYAHAQYLDQHDKALLYFDYILTNWPGSAAAEEALYRKGMVLYETERYAKA 111 Query: 202 FGYIRAYVTQFHH 214 + AY ++ H Sbjct: 112 YQAFTAYQERYPH 124 >gi|254473317|ref|ZP_05086714.1| hypothetical protein PJE062_4139 [Pseudovibrio sp. JE062] gi|211957433|gb|EEA92636.1| hypothetical protein PJE062_4139 [Pseudovibrio sp. JE062] Length = 129 Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 8/91 (8%), Positives = 28/91 (30%), Gaps = 1/91 (1%) Query: 265 VISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSL 324 ++SG + + + +LY + D ++ L Sbjct: 1 MVSGNTAFAVKGSEAFLEHGSEN-AEQINEAKLYLSAAKASGEDWEEAITGLVDVKSTDL 59 Query: 325 MEQDRYLKKASEIIMSEIGKSLIDIDFEHIQ 355 +++ L+ ++ + + I + + + Sbjct: 60 SPENQLLQISAIAMANTIREWPQPETPDASE 90 >gi|189191016|ref|XP_001931847.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973453|gb|EDU40952.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1104 Score = 40.8 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 48/134 (35%), Gaps = 7/134 (5%) Query: 262 QNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATI----QLYENILNIPFVDIMSLQRSTC 317 + + +R+ A K+ + D + Y + + F + + Sbjct: 424 RQAANRARREAQSNAHKRQRTDNDGVSAPGFKRAKETTDTYTSAGIVFFDPKDAQSKEVR 483 Query: 318 NIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESF 377 ++ + +D K++ + E+ K+ D + + EP + + G E+ Sbjct: 484 DVHKDIMHSRDSQSNKSAAARLKEMLKAK--ADGTSLPEPEPTPDSEPA-SESASGTETP 540 Query: 378 IKKNRSQIESIDVL 391 + + +++ +D L Sbjct: 541 VHLGKRKLDEVDDL 554 >gi|325263496|ref|ZP_08130230.1| ABC transporter, permease protein [Clostridium sp. D5] gi|324031205|gb|EGB92486.1| ABC transporter, permease protein [Clostridium sp. D5] Length = 1028 Score = 40.0 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 45/137 (32%), Gaps = 6/137 (4%) Query: 261 AQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIM-SLQRSTCNI 319 AQ V++GK + Q + + + L I D R+ I Sbjct: 333 AQADVLNGKVEELNQVKAQYEALAASGMTDEQTQYTLQVMYAQITEGDAQIEAART--QI 390 Query: 320 P--YYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESF 377 L + + A I + L + E K+ L+ + + + ++ Sbjct: 391 DAARGQLDSGQQQINDAWAQI-EQAQSELASGESELASKEQELNDAQAEYDDAKSEADTK 449 Query: 378 IKKNRSQIESIDVLLAE 394 IK +I+ + +++ Sbjct: 450 IKDGEKKIKDAEKDISK 466 >gi|330965739|gb|EGH65999.1| cellulose synthase operon protein C [Pseudomonas syringae pv. actinidiae str. M302091] Length = 1298 Score = 40.0 bits (92), Expect = 0.68, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 87/334 (26%), Gaps = 47/334 (14%) Query: 30 IVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKE-----TGVQLRATHMDVFVDNRNIDA 84 + Q SLQ+A D +G S + + + V+L + V +DA Sbjct: 348 LENVQLWTSLQQARDLQAKGQTSQAQALLAQAQRQNPDNIDVRLTLADVQV--QAGQLDA 405 Query: 85 V-----WIYTIISQDLSVVDDLI----AKDTKGYFDI---AIVYALKKYF--SGQLEESS 130 + + + LI + + + SG+ + Sbjct: 406 AQAGYRQVLATQRGNPQAIRGLINVLAQRGQADEALRLLDTLSPGEQAKLGDSGRFKALR 465 Query: 131 KELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEI----AL 186 + L + FD RL +E AL Sbjct: 466 STQVARLAEQRGDVRAAQAALKDA---VKNDPDNVWTRFDLARLYLK---TDEAPKARAL 519 Query: 187 RNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTIS 246 + L Q + + S+ F + D+ Sbjct: 520 IDELLKAQPNDIDALYTGA-------LLSVEMGQ-WQDAQTTFARIPVDQRTPDMKALAD 571 Query: 247 FFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPF 306 ++ Q + + IA+ G+R+ + +L+ + + L Y + P Sbjct: 572 EITMTVQINLAIGIARR----GQRQEALALLDRLQPVASGSPERQLTLANAYIDAGE-PA 626 Query: 307 VDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMS 340 + + P D L+ A ++ Sbjct: 627 RGRDMARAAIAQAPV---PSADLMLQYAGLLLAG 657 >gi|313668665|ref|YP_004048949.1| periplasmic protein [Neisseria lactamica ST-640] gi|313006127|emb|CBN87588.1| putative periplasmic protein [Neisseria lactamica 020-06] Length = 614 Score = 39.6 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 13/194 (6%) Query: 145 IVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQNEVGERAFGY 204 + L G+A A + R SP + E AL + + E E + Sbjct: 73 LGGETALQKGQAGT----ALAAYMLMLERTKSPE--VAERALEMAVSLNAFEQAEMIY-- 124 Query: 205 IRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNS 264 Q K + LR L + + + ++ + R ++L +AQ + Sbjct: 125 --QKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLEEVLAQADEGQNRRVFLLLAQAA 182 Query: 265 VISGKRKIGFLAIKQLKRIIDRLDY-KDLATIQLYENILNIPFVDIMSLQRSTCNIPYYS 323 V + + A K ++R + + A + ++ ++ + + Sbjct: 183 VQ--QDGLAQKASKAVRRASLEYGHLPEAAVADVVFSLQAREKEKAIAALQRLSKLDAEI 240 Query: 324 LMEQDRYLKKASEI 337 L L+ + Sbjct: 241 LPPTFIALRLTARQ 254 >gi|320161155|ref|YP_004174379.1| beta-ketoacyl synthase family protein [Anaerolinea thermophila UNI-1] gi|319995008|dbj|BAJ63779.1| beta-ketoacyl synthase family protein [Anaerolinea thermophila UNI-1] Length = 2805 Score = 39.6 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 44/149 (29%), Gaps = 19/149 (12%) Query: 33 YQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTIIS 92 Q +RSLQR + D + ++I E ++RA D + Sbjct: 1282 IQQLRSLQRL----ISPDTEVYREIQRRADEIDEKIRAL------DYHFDRRFVFRVLSM 1331 Query: 93 QDLSVVDDLIAKDTKGYFDIAIVYA--LKKYFS-----GQLEESSKELSK-IKDKDNTRG 144 + + A+ + + A G+ + + Sbjct: 1332 GHSQFAEYIGARGPNTHVNAACATTTHAIAIAEDWIRAGRARRVVIIAGDDVTSGALSEW 1391 Query: 145 IVPYLHLLIGRAMMPFSSQQAVHFFDYVR 173 I L + G A + ++A+ FD R Sbjct: 1392 IGTSL-MASGAATVEGDPRKAILPFDRRR 1419 >gi|50419777|ref|XP_458420.1| DEHA2C16830p [Debaryomyces hansenii CBS767] gi|52782854|sp|Q6BTP9|GRPE_DEBHA RecName: Full=GrpE protein homolog, mitochondrial; Flags: Precursor gi|49654086|emb|CAG86502.1| DEHA2C16830p [Debaryomyces hansenii] Length = 243 Score = 39.6 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 50/137 (36%), Gaps = 13/137 (9%) Query: 258 LKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTC 317 +++ + +V++ + + A + + + D + Q E + + Sbjct: 22 MRVVRPTVLAPRMSMIRFASTEASKKEGKEDKAEAQGSQEPETAAE-TNKEAEGAKVEVS 80 Query: 318 NIPY--YSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIE 375 I L ++DR L I DF ++Q+ L+K++ R ++ Sbjct: 81 EIDELKAKLTKKDRELADMKNHYARAI------ADFRNLQESTKLEKQKARD----FALQ 130 Query: 376 SFIKKNRSQIESIDVLL 392 F K +++ D+ L Sbjct: 131 KFAKDLLESVDNFDLAL 147 >gi|91216690|ref|ZP_01253655.1| hypothetical protein P700755_08509 [Psychroflexus torquis ATCC 700755] gi|91185159|gb|EAS71537.1| hypothetical protein P700755_08509 [Psychroflexus torquis ATCC 700755] Length = 516 Score = 39.6 bits (91), Expect = 0.96, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 50/155 (32%), Gaps = 12/155 (7%) Query: 245 ISFFSLEEQRAIYLKIAQNSVISGKRKIGFL-AIKQLKRIIDRLDYKDLATIQLYENILN 303 + F ++E I L I + ++ G + A+ Q+ I+ + QL +N Sbjct: 339 LGFRQMQEGELILLTINRAALAQGYGSVALSPAVLQVLGILQQGGTPTQEQAQLVLGAVN 398 Query: 304 IPFVDIMSLQRSTCNIPYYSLMEQD--RYLKKA-------SEIIMSEIGKSLIDIDFEHI 354 I L + L +A ++ +++ +G+ + Sbjct: 399 GIDDKDALDSSELSAISNARLSYNSTIQSLAEANGLAFVDADALLNRVGQGISFPGGIIT 458 Query: 355 QKDLLLDKKEPRHTNVSMGIESFIKKNRSQIESID 389 + +++ + I +E+I+ Sbjct: 459 SDFVTGGGFSLDGVHLTPRGYALI--ANETLEAIN 491 >gi|309779289|ref|ZP_07674051.1| sensory box sensor/GGDEF/EAL domain protein [Ralstonia sp. 5_7_47FAA] gi|308921847|gb|EFP67482.1| sensory box sensor/GGDEF/EAL domain protein [Ralstonia sp. 5_7_47FAA] Length = 863 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 67/222 (30%), Gaps = 17/222 (7%) Query: 182 EEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDI 241 EE+ R E+ R Y + H I + L +++ Sbjct: 425 EEVIWRQANFDPLTELPNRHMFY-----NRLRHEI--ARARQASTQLALLFIDLDRFKEV 477 Query: 242 VFTISFFSLEEQRAIYLKIAQN--SVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYE 299 T+ ++ + +IA+ +++ G + LA + I+ L AT + Sbjct: 478 NDTLGH---DQGDVLLKEIARRISAIVRGTDTVARLAGDEFTIILPDLPDAGAATPIIRA 534 Query: 300 NILNIPFV-DIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEH-IQKD 357 + I + ++ +D ++ + + + Sbjct: 535 LLARIAAPLQLGEESVEVSASIGVAMYPRDADSAESLLVRADQAMFAAKSAGRNQWAVFT 594 Query: 358 LLLDKKEPRHTNVSMGIESFIKKNRSQIE---SIDVLLAEAR 396 L + E V+ + + + + + +D+L + R Sbjct: 595 PALQRAEQERLRVTSDLRVALTQGQLAVHYQPIVDLLTGKVR 636 >gi|73979211|ref|XP_849280.1| PREDICTED: similar to secreted frizzled-related protein 1 [Canis familiaris] Length = 393 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 16/159 (10%), Positives = 36/159 (22%), Gaps = 18/159 (11%) Query: 233 QLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDL 292 + P + EQ + L + + +G A R+ Sbjct: 38 EESSPVSRLAERSKRMRPSEQPPLQLPLREREGPAG----ASQADLGGFRLAGPGSGFVR 93 Query: 293 ATIQLYENILNIPFVDIMSLQRSTCN------IPYYSLMEQDRYLKKASEIIMSEIGKSL 346 + + LY QR +P + +R L + + G+ Sbjct: 94 SRLPLYCG--------PGGQQRELGQRVRLRELPVGHRLLPERALVHQAAAVRGHPGRPP 145 Query: 347 IDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQI 385 + H + + ++ Sbjct: 146 AVPQRGLQEDGAAQPAGARDHGRGEAAGQQLGAPAQQEL 184 >gi|218186505|gb|EEC68932.1| hypothetical protein OsI_37627 [Oryza sativa Indica Group] Length = 1041 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 49/146 (33%), Gaps = 5/146 (3%) Query: 240 DIVFTISFFSLEEQRAIYLKIAQNSVI--SGKRKIGFLAIKQLKRIIDR--LDYKDLATI 295 D+V ++ E+ + L AQ +V+ G + A K+ I L Sbjct: 857 DLVPILAHQYFSEKLPVTLHGAQAAVLFCMGLQDKDIGATKEELGIEREQVLSNFIKTMK 916 Query: 296 QLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQ 355 +LY + NI +I + I L D L +A+ + + +++ + D + Sbjct: 917 KLYGYLHNIAGKEIEATLPRLKEIDTAPLKSLDEDLDEAAREVKEQ-RRAIDEDDVDPKF 975 Query: 356 KDLLLDKKEPRHTNVSMGIESFIKKN 381 + + ++ Sbjct: 976 LQMYAIDADDDEIEKALNGGKISASG 1001 >gi|213967293|ref|ZP_03395442.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato T1] gi|213928135|gb|EEB61681.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato T1] Length = 1230 Score = 39.2 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 88/334 (26%), Gaps = 47/334 (14%) Query: 30 IVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKE-----TGVQLRATHMDVFVDNRNIDA 84 + Q SLQ A D +G S + + + V+L + V +DA Sbjct: 280 LENVQLWTSLQEARDLQAKGQTSQAQALLAQAQRQNPDNIDVRLTLADVQV--QAGQLDA 337 Query: 85 V-----WIYTIISQDLSVVDDLI----AKDTKGYFDI---AIVYALKKYF--SGQLEESS 130 + + + LI + + + SG+ + Sbjct: 338 AQAGYRQVLATQRGNPQAIRGLINVLAQRGQADEALRLLDTLSPGEQSKLGDSGRFKALR 397 Query: 131 KELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEI----AL 186 + L + FD RL +E AL Sbjct: 398 STQVARLAEQRGDVRAAQAALKDA---VKNDPDNVWTRFDLARLYLK---TDEAPKARAL 451 Query: 187 RNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTIS 246 + L Q + + S+ F + D+ Sbjct: 452 IDELLKAQPNNIDALYTSA-------LLSVEMGQ-WQDAQTTFTRIPVDQRTPDMKALAD 503 Query: 247 FFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPF 306 ++ Q + + IA+ G+R+ + +L+ + + L Y + P Sbjct: 504 EVTMTVQINLAIGIARR----GQRQEALALLDRLQPVASGSPERQLTLASAYIDAGE-PA 558 Query: 307 VDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMS 340 + + P L D L+ A ++ + Sbjct: 559 RGREMARAAIAQAP---LPSADLMLQYAGLLLAA 589 >gi|163846912|ref|YP_001634956.1| hypothetical protein Caur_1339 [Chloroflexus aurantiacus J-10-fl] gi|163668201|gb|ABY34567.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus J-10-fl] Length = 2494 Score = 39.2 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 32/101 (31%), Gaps = 2/101 (1%) Query: 197 VGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAI 256 R +AY+ S ++ + G L + + +S Sbjct: 2388 DAGRYEEAEQAYLAAVRASPTAGNYNKLATALIDWGWLDKAEIALGQALST-DPGLP-DP 2445 Query: 257 YLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQL 297 Y ++A+ + + + A+++ ++ + A L Sbjct: 2446 YFQLARLFMQRNQTTLAQDALQRYLQLAPEGRWAGEARQML 2486 >gi|222524734|ref|YP_002569205.1| tetratricopeptide repeat-containing protein [Chloroflexus sp. Y-400-fl] gi|222448613|gb|ACM52879.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl] Length = 2490 Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 32/101 (31%), Gaps = 2/101 (1%) Query: 197 VGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAI 256 R +AY+ S ++ + G L + + +S Sbjct: 2384 DAGRYEEAEQAYLAAVRASPTAGNYNKLATALIDWGWLDKAEIALGQALST-DPGLP-DP 2441 Query: 257 YLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQL 297 Y ++A+ + + + A+++ ++ + A L Sbjct: 2442 YFQLARLFMQRNQTTLAQDALQRYLQLAPEGRWAGEARQML 2482 >gi|222616707|gb|EEE52839.1| hypothetical protein OsJ_35372 [Oryza sativa Japonica Group] Length = 1024 Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 48/146 (32%), Gaps = 5/146 (3%) Query: 240 DIVFTISFFSLEEQRAIYLKIAQNSVI--SGKRKIGFLAIKQLKRIIDR--LDYKDLATI 295 D+V ++ E+ + L AQ +V+ G + A K+ I L Sbjct: 840 DLVPILAHQYFSEKLPVTLHGAQAAVLFCMGLQDKDIGATKEELGIEREQVLSNFIKTMK 899 Query: 296 QLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQ 355 +LY + NI +I + I L D L +A+ + + +++ + D + Sbjct: 900 KLYGYLHNIAGKEIEATLPRLKEIDTAPLKSLDEDLDEAAREVKEQ-RRAIDEDDVDPKF 958 Query: 356 KDLLLDKKEPRHTNVSMGIESFIKKN 381 + ++ Sbjct: 959 LQKYAIDADDDEIEKALNGGKISASG 984 >gi|319948137|ref|ZP_08022300.1| putative FAD-binding dehydrogenase [Dietzia cinnamea P4] gi|319438205|gb|EFV93162.1| putative FAD-binding dehydrogenase [Dietzia cinnamea P4] Length = 606 Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 12/102 (11%), Positives = 28/102 (27%), Gaps = 4/102 (3%) Query: 35 CVR-SLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTIISQ 93 VR +++ +DE + D + A + Sbjct: 209 LVRFAVRHRVDEIVVDDGRAVGVRGATLVPCDYDRGVASPREETGEFEFRAKAVLLASGG 268 Query: 94 ---DLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKE 132 + +V D G ++ + ++ G++ E S Sbjct: 269 IGGNPDLVRKYWPTDRLGDVPENLIVGVPEHVDGRMLEISAR 310 >gi|256832463|ref|YP_003161190.1| ABC transporter-like protein [Jonesia denitrificans DSM 20603] gi|256685994|gb|ACV08887.1| ABC transporter related [Jonesia denitrificans DSM 20603] Length = 631 Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 9/92 (9%) Query: 88 YTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVP 147 Y + + IA+ DI ++ + + E + + Sbjct: 525 YRMSGGERQ--RLAIARLLLKEPDIVVLDEATAHLDSESEAAVSA-------ALREALAG 575 Query: 148 YLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGT 179 L+I + A+ D R+ GT Sbjct: 576 RTALVIAHRLSTVRDADAILVLDQGRIVEQGT 607 >gi|15676254|ref|NP_273388.1| hypothetical protein NMB0339 [Neisseria meningitidis MC58] gi|7225559|gb|AAF40782.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|316984343|gb|EFV63317.1| tetratricopeptide repeat family protein [Neisseria meningitidis H44/76] gi|325132894|gb|EGC55571.1| hypothetical protein NMBM6190_0274 [Neisseria meningitidis M6190] gi|325134920|gb|EGC57552.1| hypothetical protein NMBM13399_0337 [Neisseria meningitidis M13399] gi|325138879|gb|EGC61429.1| hypothetical protein NMBES14902_0323 [Neisseria meningitidis ES14902] gi|325140988|gb|EGC63494.1| hypothetical protein NMBCU385_0299 [Neisseria meningitidis CU385] gi|325143053|gb|EGC65404.1| hypothetical protein NMB9615945_0384 [Neisseria meningitidis 961-5945] gi|325199533|gb|ADY94988.1| conserved hypothetical protein [Neisseria meningitidis H44/76] Length = 389 Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 48/171 (28%), Gaps = 10/171 (5%) Query: 115 VYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRL 174 + AL SG+ E+ + + L+L +G+ L Sbjct: 48 LDALVDRNSGRAARELAEVVDGRPQSYD------LNLTLGKLYRQRGENDKAINIHRTML 101 Query: 175 TSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 SP T E+ A R L E+ QN LL + + Sbjct: 102 DSPDTVGEKRA-RVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD 160 Query: 235 KLPDEDIVFTISFFSLEEQRAI---YLKIAQNSVISGKRKIGFLAIKQLKR 282 + +S Q I Y ++AQ ++ + + + Sbjct: 161 WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALE 211 >gi|301383072|ref|ZP_07231490.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato Max13] gi|302060343|ref|ZP_07251884.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato K40] gi|302130910|ref|ZP_07256900.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 1298 Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 88/334 (26%), Gaps = 47/334 (14%) Query: 30 IVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKE-----TGVQLRATHMDVFVDNRNIDA 84 + Q SLQ A D +G S + + + V+L + V +DA Sbjct: 348 LENVQLWTSLQEARDLQAKGQTSQAQALLAQAQRQNPDNIDVRLTLADVQV--QAGQLDA 405 Query: 85 V-----WIYTIISQDLSVVDDLI----AKDTKGYFDI---AIVYALKKYF--SGQLEESS 130 + + + LI + + + SG+ + Sbjct: 406 AQAGYRQVLATQRGNPQAIRGLINVLAQRGQADEALRLLDTLSPGEQSKLGDSGRFKALR 465 Query: 131 KELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEI----AL 186 + L + FD RL +E AL Sbjct: 466 STQVARLAEQRGDVRAAQAALKDA---VKNDPDNVWTRFDLARLYLK---TDEAPKARAL 519 Query: 187 RNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTIS 246 + L Q + + S+ F + D+ Sbjct: 520 IDELLKAQPNNIDALYTSA-------LLSVEMGQ-WQDAQTTFTRIPVDQRTPDMKALAD 571 Query: 247 FFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPF 306 ++ Q + + IA+ G+R+ + +L+ + + L Y + P Sbjct: 572 EVTMTVQINLAIGIARR----GQRQEALALLDRLQPVASGSPERQLTLASAYIDAGE-PA 626 Query: 307 VDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMS 340 + + P L D L+ A ++ + Sbjct: 627 RGREMARAAIAQAP---LPSADLMLQYAGLLLAA 657 >gi|194100505|ref|YP_002003350.1| gp16 [Yersinia phage Yepe2] gi|193201238|gb|ACF15719.1| gp16 [Yersinia phage Yepe2] Length = 1315 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 8/92 (8%) Query: 4 KYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKI--PDIV 61 K + AMD++ A + P++ D G + ++ Sbjct: 1058 KRKLANDPRAMDLWR-LADKVADETMLRPHKV-----SLQDSHAFGATAKLVLQFKSFVI 1111 Query: 62 KETGVQLRATHMDVFVDNRNIDAVWIYTIISQ 93 K + + + F + R +D Y I Sbjct: 1112 KSMNSKFIRSGNEAFKNQRAMDMALTYAISGG 1143 >gi|300114549|ref|YP_003761124.1| TonB-dependent receptor [Nitrosococcus watsonii C-113] gi|299540486|gb|ADJ28803.1| TonB-dependent receptor [Nitrosococcus watsonii C-113] Length = 1125 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 65/222 (29%), Gaps = 21/222 (9%) Query: 115 VYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRL 174 + A G+++E+ ++ L A++ ++A+ Sbjct: 252 LQAALLLVVGRVDEARSKIQH--ALQLDPDQGTAYALQAIIALVQNQKEKALSLAQQAAK 309 Query: 175 TSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 P + + +IAL ERA + + + F + + + L Sbjct: 310 LDPRSPIPQIAL--SYVYQGMFNIERALAHAQQAIELFPGAPLA---WARVAELQLSLGN 364 Query: 235 KLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLK---RIIDRLDYKD 291 + +A+ + G + + I++ K + LD D Sbjct: 365 SEKAAKAAQQAVALDPD--------LARTQTVQGFADLTAIDIEEAKGAFKRAIELDPAD 416 Query: 292 LATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKK 333 +L + I D+ + + SL + ++ Sbjct: 417 P-LSRLGLGLAKIRQGDLKAGTQEIE--IAASLDPNNSLIRS 455 >gi|281202107|gb|EFA76312.1| dynamin like protein [Polysphondylium pallidum PN500] Length = 1644 Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 27/85 (31%), Gaps = 6/85 (7%) Query: 163 QQAVHFFDYVRLTSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFI 222 A+ FF LT P T + AL + QN E Y +F SI F Sbjct: 1171 ADALTFF----LTLPTTAANKSALNEAILQLQNRDAEVLEQL--QYDRRFERSIGLTSFR 1224 Query: 223 SVLLRFFLHGQLKLPDEDIVFTISF 247 + + E + +F Sbjct: 1225 HAISELTWRRYQEAIPEVLKRLRAF 1249 >gi|77553763|gb|ABA96559.1| expressed protein [Oryza sativa Japonica Group] Length = 659 Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 48/146 (32%), Gaps = 5/146 (3%) Query: 240 DIVFTISFFSLEEQRAIYLKIAQNSVI--SGKRKIGFLAIKQLKRIIDR--LDYKDLATI 295 D+V ++ E+ + L AQ +V+ G + A K+ I L Sbjct: 475 DLVPILAHQYFSEKLPVTLHGAQAAVLFCMGLQDKDIGATKEELGIEREQVLSNFIKTMK 534 Query: 296 QLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQ 355 +LY + NI +I + I L D L +A+ + + +++ + D + Sbjct: 535 KLYGYLHNIAGKEIEATLPRLKEIDTAPLKSLDEDLDEAAREVKEQ-RRAIDEDDVDPKF 593 Query: 356 KDLLLDKKEPRHTNVSMGIESFIKKN 381 + ++ Sbjct: 594 LQKYAIDADDDEIEKALNGGKISASG 619 >gi|291542494|emb|CBL15604.1| DNA primase, catalytic core [Ruminococcus bromii L2-63] Length = 588 Score = 38.5 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 40/95 (42%), Gaps = 6/95 (6%) Query: 48 RGDISLQKKIPDIVK-ETGVQLRATHMDVFVDNRNI---DAVWIYTIISQDLSVVDDLIA 103 RG+ + +KK ++ E + + + F R+ +A+ +Y + + +++ A Sbjct: 430 RGERAEEKKQARQIQLELSRRNDKINPEHFQKPRSSSAEEALLVYLLN--NPDAYEEISA 487 Query: 104 KDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKD 138 + F ++ +YFS ++E L+ Sbjct: 488 RVKPEQFQNTLMRRFFEYFSARIERGEDPLTNTAA 522 >gi|325145134|gb|EGC67416.1| hypothetical protein NMBM01240013_0360 [Neisseria meningitidis M01-240013] Length = 389 Score = 38.5 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 48/171 (28%), Gaps = 10/171 (5%) Query: 115 VYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRL 174 + AL SG+ E+ + + L+L +G+ L Sbjct: 48 LDALVDRNSGRAARELAEVVDGRPQSYD------LNLTLGKLYRQRGENDKAINIHRTML 101 Query: 175 TSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 SP T E+ A R L E+ QN LL + + Sbjct: 102 DSPDTVGEKRA-RVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD 160 Query: 235 KLPDEDIVFTISFFSLEEQRAI---YLKIAQNSVISGKRKIGFLAIKQLKR 282 + +S Q I Y ++AQ ++ + + + Sbjct: 161 WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALE 211 >gi|161870730|ref|YP_001599903.1| tetratricopeptide repeat protein [Neisseria meningitidis 053442] gi|161596283|gb|ABX73943.1| periplasmic hypothetical protein [Neisseria meningitidis 053442] Length = 402 Score = 38.5 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 48/171 (28%), Gaps = 10/171 (5%) Query: 115 VYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRL 174 + AL SG+ E+ + + L+L +G+ L Sbjct: 61 LDALVDRNSGRAARELAEVVDGRPQSYD------LNLTLGKLYRQRGENDKAINIHRTML 114 Query: 175 TSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 SP T E+ A R L E+ QN LL + + Sbjct: 115 DSPDTVGEKRA-RVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD 173 Query: 235 KLPDEDIVFTISFFSLEEQRAI---YLKIAQNSVISGKRKIGFLAIKQLKR 282 + +S Q I Y ++AQ ++ + + + Sbjct: 174 WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALE 224 >gi|119637782|ref|YP_919018.1| Internal virion protein D [Yersinia phage Berlin] gi|119391813|emb|CAJ70686.1| hypothetical protein [Yersinia phage Berlin] Length = 1315 Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 8/92 (8%) Query: 4 KYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKI--PDIV 61 K + AMD++ A + P++ D G + ++ Sbjct: 1058 KRKLANDPRAMDLWR-LADKVADETMLRPHKV-----SLQDSHAFGATAKLVLQFKSFVI 1111 Query: 62 KETGVQLRATHMDVFVDNRNIDAVWIYTIISQ 93 K + + + F ++R +D Y I Sbjct: 1112 KSMNSKFIRSGNEAFKNHRAMDMALTYAISGG 1143 >gi|293607618|ref|ZP_06689952.1| tetratricopeptide TPR_2 [Achromobacter piechaudii ATCC 43553] gi|292814051|gb|EFF73198.1| tetratricopeptide TPR_2 [Achromobacter piechaudii ATCC 43553] Length = 628 Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 49/390 (12%), Positives = 102/390 (26%), Gaps = 59/390 (15%) Query: 51 ISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLS---VVDDLIAKDTK 107 S + + D D R + + +L+ + A+ + Sbjct: 97 ASEIAAQRGMYGTAATTMVGLARDT-GDPRLARRGLEFQLAGGNLAGALDAARVWARLSP 155 Query: 108 GYFDIAIVYALKKYFSGQLEESSKELSKI--KDKDNTRGIVPYLHLLI------------ 153 + + +GQ + ++ L +D I L +L Sbjct: 156 NDIEASSTELALAAANGQTKGLAQALRNRIDSSRDKPAAIGQALAVLSRLNDRRLALRIL 215 Query: 154 ------------GRAMMPFSSQQAVHFFDYVRLTSPGTFL----EEIALRNLLEITQNEV 197 + A ++ S E A + LLE Sbjct: 216 DESLSDNVRKLPAAHLALADVASAAGDYERATQESRAALAADPKSEAAAQRLLEYGSKVD 275 Query: 198 GERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQR--- 254 +RA RAY+ + + + +R L GQL D ++ +R Sbjct: 276 PQRAQTEARAYINRHPN--------ARKVRLMLAGQLADS-GDYNGALTELQAMSRRSPE 326 Query: 255 --AIYLKIAQNSVISGKRKIGF--------LAIKQLKRIIDRLDYKDLATIQLYENILNI 304 + AQ + +G+ + + ++ + + A + + I Sbjct: 327 DFDLLFMQAQLAYKAGQLQQAKTLLQQYLDVQQQRQRATVPGATDAGAAAADAHVLLSRI 386 Query: 305 PFV--DIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDK 362 + I +L + A + +L ID Q D Sbjct: 387 AEDQGNYDEAINELGRIDDPTLRYSVHMRQAALRAKSGRVNDALAMIDAAGPQDDEERTL 446 Query: 363 KEPRHTNVSMGIESFIKKNRSQIESIDVLL 392 + + + + S +E+ D L Sbjct: 447 GVLTKAQILRDAD-RVPQAVSTLEAADQAL 475 >gi|218665177|ref|YP_002427136.1| TPR domain protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517390|gb|ACK77976.1| TPR domain protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 603 Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 16/158 (10%) Query: 148 YLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLL-EITQNEVGERAFGYIR 206 Y L+ A + Q A+ + +P E LR I + + A R Sbjct: 86 YYLLVAEFATVQRQPQLAIPAWQKAAKLAP----EPNVLRRATQAIARFGDFQDALQLAR 141 Query: 207 AYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVI 266 + S D F + L GQ + + + T++ F + + + L+ A+ V Sbjct: 142 RWRQAAPGSAEADQFEAAL--LLTTGQDEQALQLLQATLARFPDDPK--VTLQFAELLVT 197 Query: 267 SGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNI 304 G+ + +R++ L KD + Y + I Sbjct: 198 HGR-------SGEARRLLSALADKDPKSAAAYYALGRI 228 >gi|121635525|ref|YP_975770.1| hypothetical protein NMC1831 [Neisseria meningitidis FAM18] gi|120867231|emb|CAM11000.1| putative periplasmic hypothetical protein [Neisseria meningitidis FAM18] gi|325202841|gb|ADY98295.1| conserved hypothetical protein [Neisseria meningitidis M01-240149] Length = 389 Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 48/171 (28%), Gaps = 10/171 (5%) Query: 115 VYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRL 174 + AL SG+ E+ + + L+L +G+ L Sbjct: 48 LDALVDRNSGRAARELAEVVDGRPQSYD------LNLTLGKLYRQRGENDKAINIHRTML 101 Query: 175 TSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 SP T E+ A R L E+ QN LL + + Sbjct: 102 DSPDTVGEKRA-RVLFELAQNYQSAGLVDRAEQIFLGLQDGEMAREARQHLLNIYQQDRD 160 Query: 235 KLPDEDIVFTISFFSLEEQRAI---YLKIAQNSVISGKRKIGFLAIKQLKR 282 + +S Q I Y ++AQ ++ + + + Sbjct: 161 WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALE 211 >gi|312436382|gb|ADQ83191.1| internal virion protein D [Yersinia phage Yep-phi] Length = 1315 Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 8/92 (8%) Query: 4 KYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKI--PDIV 61 K + AMD++ A + P++ D G + ++ Sbjct: 1058 KRKLANDPRAMDLWR-LADKVADETMLRPHKV-----SLQDSHAFGATAKLVLQFKSFVI 1111 Query: 62 KETGVQLRATHMDVFVDNRNIDAVWIYTIISQ 93 K + + + F ++R +D Y I Sbjct: 1112 KSMNSKFIRSGNEAFKNHRAMDMALTYAISGG 1143 >gi|258543929|ref|ZP_05704163.1| tetratricopeptide repeat protein [Cardiobacterium hominis ATCC 15826] gi|258520868|gb|EEV89727.1| tetratricopeptide repeat protein [Cardiobacterium hominis ATCC 15826] Length = 474 Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 45/157 (28%), Gaps = 7/157 (4%) Query: 226 LRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKI--AQNSVISGKRKIGFLAIKQLKRI 283 L + ++ ++Q + L+ A + G AI +L+ + Sbjct: 76 LDSAIINGDADAVAMLLPIYRKLPADKQDKMLLRFGEAMKARADGDLSR---AIARLREM 132 Query: 284 IDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIG 343 I + L + + + + + L E R + + + E Sbjct: 133 IAEDPSLQPVRLHL--AMALLADHQDEAARTQLEKLRSDELPEDIRNIVSQALDTLRERQ 190 Query: 344 KSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKK 380 + + + D R V G +F ++ Sbjct: 191 SWTFNASGYYRHDKNINDAPRQRERQVGNGKWTFPER 227 >gi|212527108|ref|XP_002143711.1| alpha-aminoadipate reductase Lys2, putative [Penicillium marneffei ATCC 18224] gi|210073109|gb|EEA27196.1| alpha-aminoadipate reductase Lys2, putative [Penicillium marneffei ATCC 18224] Length = 1172 Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 51/198 (25%), Gaps = 31/198 (15%) Query: 190 LEITQNEVGERAFGYIRAY-----VTQFHHSIYKDH------FISVLLRFFLHGQLKLPD 238 +E E ER F Y + Y + + H + F + + L Sbjct: 38 VETASAEGPERRFTYKQIYEASNTLAHYLHDAGITNDDVVMIFAHRSVDLVVAIMGTLSS 97 Query: 239 EDIVFTISFFSLEEQRAIYLKIAQ-NSVIS-GKRKIGFLAIKQLKRIIDRLDYKDLATIQ 296 + ++ IYL++AQ ++I+ G+ A + + + + Sbjct: 98 AATFTVLDPAYPPARQKIYLEVAQPRALINIGR------ATDEAGVLAPIVRSYIDDELN 151 Query: 297 LYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQK 356 L +P + + +L + K + Sbjct: 152 L---KAEVPSLRLG---------DDGTLSGGEIDGKDVFYEARQKASAPPPTQVGPDSNP 199 Query: 357 DLLLDKKEPRHTNVSMGI 374 L +G Sbjct: 200 TLSFTSGSEGRPKGVLGR 217 >gi|241759375|ref|ZP_04757480.1| N-acetylglucosaminyl transferase [Neisseria flavescens SK114] gi|261381361|ref|ZP_05985934.1| tetratricopeptide repeat protein [Neisseria subflava NJ9703] gi|241320320|gb|EER56639.1| N-acetylglucosaminyl transferase [Neisseria flavescens SK114] gi|284795678|gb|EFC51025.1| tetratricopeptide repeat protein [Neisseria subflava NJ9703] Length = 389 Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 62/230 (26%), Gaps = 12/230 (5%) Query: 115 VYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRL 174 + AL SG+ E+ + + L+L +G+ L Sbjct: 48 LDALVDRNSGRAARELAEVIDQQPQSYD------LNLTLGKLYRQRGENDKAINMHRALL 101 Query: 175 TSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 SP T E+ A R L E+ QN LL + + Sbjct: 102 DSPDTVNEKRA-RVLFELAQNYQSAGLVDRAEQIFLGLQEGDMAREARQHLLSIYQQDRD 160 Query: 235 KLPDEDIVFTISFFSLEEQRAI---YLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKD 291 ++ +S Q I Y +IAQ ++ I + + + Sbjct: 161 WEKAIEMAQLLSHDEQTYQFEIAQFYCEIAQAALFKSNFDAARYNIGKALEANKKCTRAN 220 Query: 292 LATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSE 341 + + N P + + + L L +A + Sbjct: 221 IILGDIEYRQGNFPA--AVEAYSAIEQQNHAYLSMVGEKLYEAYAAQGKQ 268 >gi|225012330|ref|ZP_03702766.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium MS024-2A] gi|225003307|gb|EEG41281.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium MS024-2A] Length = 463 Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 23/101 (22%), Gaps = 2/101 (1%) Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENI 301 + I LKIA +G++ + + L L LY + Sbjct: 326 ESITLEEDNYRKAKILLKIANKFKAAGRKSSARSYANKALSLQPSLGRAYLLIANLYADS 385 Query: 302 LNIPFVDI--MSLQRSTCNIPYYSLMEQDRYLKKASEIIMS 340 N D LKK + Sbjct: 386 ANDCGDTQFNKRAVYWLAASVARKAGNVDNSLKKVANQTAD 426 >gi|66473259|gb|AAY46271.1| polyprotein [Aichi virus] Length = 2433 Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 11/101 (10%), Positives = 24/101 (23%), Gaps = 5/101 (4%) Query: 277 IKQLKRIIDRLDYKDLATIQLYENILNIPFVDIM-----SLQRSTCNIPYYSLMEQDRYL 331 + R N + R+ ++ D Sbjct: 207 SASADSLPGRSGGASSEKTHTVSGSSNKVGSRFSKWWEPAAARALERATDSAIDGIDAAG 266 Query: 332 KKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSM 372 K AS+ I ++ + H Q L+ ++ + Sbjct: 267 KAASKAITRKLDRPAAPSSTTHPQPSLIALNPSATQSDNAS 307 >gi|325128925|gb|EGC51779.1| hypothetical protein NMXN1568_0301 [Neisseria meningitidis N1568] gi|325130918|gb|EGC53647.1| hypothetical protein NMBOX9930304_0322 [Neisseria meningitidis OX99.30304] gi|325136914|gb|EGC59511.1| hypothetical protein NMBM0579_0312 [Neisseria meningitidis M0579] gi|325205416|gb|ADZ00869.1| conserved hypothetical protein [Neisseria meningitidis M04-240196] Length = 389 Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 48/171 (28%), Gaps = 10/171 (5%) Query: 115 VYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRL 174 + AL SG+ E+ + + L+L +G+ L Sbjct: 48 LDALVDRNSGRAARELAEVIDQQPQSYD------LNLTLGKLYRQRGENDKAINIHRTML 101 Query: 175 TSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 SP T E+ A R L E+ QN LL + + Sbjct: 102 DSPDTVGEKRA-RVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD 160 Query: 235 KLPDEDIVFTISFFSLEEQRAI---YLKIAQNSVISGKRKIGFLAIKQLKR 282 + +S Q I Y ++AQ ++ + + + Sbjct: 161 WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALE 211 >gi|225077206|ref|ZP_03720405.1| hypothetical protein NEIFLAOT_02261 [Neisseria flavescens NRL30031/H210] gi|224951458|gb|EEG32667.1| hypothetical protein NEIFLAOT_02261 [Neisseria flavescens NRL30031/H210] Length = 402 Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 62/230 (26%), Gaps = 12/230 (5%) Query: 115 VYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRL 174 + AL SG+ E+ + + L+L +G+ L Sbjct: 61 LDALVDRNSGRAARELAEVIDQQPQSYD------LNLTLGKLYRQRGENDKAINMHRALL 114 Query: 175 TSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 SP T E+ A R L E+ QN LL + + Sbjct: 115 DSPDTVNEKRA-RVLFELAQNYQSAGLVDRAEQIFLGLQEGDMAREARQHLLSIYQQDRD 173 Query: 235 KLPDEDIVFTISFFSLEEQRAI---YLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKD 291 ++ +S Q I Y +IAQ ++ I + + + Sbjct: 174 WEKAIEMAQLLSHDEQTYQFEIAQFYCEIAQAALFKSNFDTARYNIGKALEANKKCTRAN 233 Query: 292 LATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSE 341 + + N P + + + L L +A + Sbjct: 234 IILGDIEYRQGNFPA--AVEAYSAIEQQNHAYLSMVGEKLYEAYAAQGKQ 281 >gi|319637623|ref|ZP_07992389.1| hypothetical protein HMPREF0604_00012 [Neisseria mucosa C102] gi|317400778|gb|EFV81433.1| hypothetical protein HMPREF0604_00012 [Neisseria mucosa C102] Length = 389 Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 62/230 (26%), Gaps = 12/230 (5%) Query: 115 VYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRL 174 + AL SG+ E+ + + L+L +G+ L Sbjct: 48 LDALVDRNSGRAARELAEVIDQQPQSYD------LNLTLGKLYRQRGENDKAINMHRALL 101 Query: 175 TSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 SP T E+ A R L E+ QN LL + + Sbjct: 102 DSPDTVNEKRA-RVLFELAQNYQSAGLVDRAEQIFLGLQEGDMAREARQHLLSIYQQDRD 160 Query: 235 KLPDEDIVFTISFFSLEEQRAI---YLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKD 291 ++ +S Q I Y +IAQ ++ I + + + Sbjct: 161 WEKAIEMAQLLSHDEQTYQFEIAQFYCEIAQAALFKSNFDTARYNIGKALEANKKCTRAN 220 Query: 292 LATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSE 341 + + N P + + + L L +A + Sbjct: 221 IILGDIEYRQGNFPA--AVEAYSAIEQQNHAYLSMVGEKLYEAYAAQGKQ 268 >gi|308388548|gb|ADO30868.1| hypothetical protein NMBB_0379 [Neisseria meningitidis alpha710] Length = 402 Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 48/171 (28%), Gaps = 10/171 (5%) Query: 115 VYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRL 174 + AL SG+ E+ + + L+L +G+ L Sbjct: 61 LDALVDRNSGRAARELAEVIDQQPQSYD------LNLTLGKLYRQRGENDKAINIHRTML 114 Query: 175 TSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 SP T E+ A R L E+ QN LL + + Sbjct: 115 DSPDTVGEKRA-RVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD 173 Query: 235 KLPDEDIVFTISFFSLEEQRAI---YLKIAQNSVISGKRKIGFLAIKQLKR 282 + +S Q I Y ++AQ ++ + + + Sbjct: 174 WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALE 224 >gi|300715086|ref|YP_003739889.1| lipoprotein [Erwinia billingiae Eb661] gi|299060922|emb|CAX58029.1| lipoprotein [Erwinia billingiae Eb661] Length = 678 Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 44/112 (39%), Gaps = 1/112 (0%) Query: 276 AIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKAS 335 A QL + L+ L + + + D+ + +L ++ + + Sbjct: 68 ANDQLSSLPQTLNDTQRQEALLLQAQVKLTQQDVNGAAGLLKQVDVSALSKEQQA-RYYQ 126 Query: 336 EIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQIES 387 I + G+ +D+ +I ++ LL + N+ ++ ++ + +Q+ + Sbjct: 127 LQIAANQGRPSLDVLRAYIAQEPLLTNPADKQKNIDATWQTLVQMSPAQVSN 178 >gi|325203452|gb|ADY98905.1| conserved hypothetical protein [Neisseria meningitidis M01-240355] Length = 389 Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 48/171 (28%), Gaps = 10/171 (5%) Query: 115 VYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRL 174 + AL SG+ E+ + + L+L +G+ L Sbjct: 48 LDALVDRNSGRAARELAEVIDQQPQSYD------LNLTLGKLYRQRGENDKAINIHRTML 101 Query: 175 TSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 SP T E+ A R L E+ QN LL + + Sbjct: 102 DSPDTVGEKRA-RVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD 160 Query: 235 KLPDEDIVFTISFFSLEEQRAI---YLKIAQNSVISGKRKIGFLAIKQLKR 282 + +S Q I Y ++AQ ++ + + + Sbjct: 161 WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALE 211 >gi|159036016|ref|YP_001535269.1| LuxR family transcriptional regulator [Salinispora arenicola CNS-205] gi|157914851|gb|ABV96278.1| transcriptional regulator, LuxR family [Salinispora arenicola CNS-205] Length = 975 Score = 38.1 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 28/245 (11%), Positives = 69/245 (28%), Gaps = 19/245 (7%) Query: 98 VDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAM 157 + L+ D G A Y L+++ +D + L + Sbjct: 323 LLGLLQNDVAGRLVAPDEQAADWYAFHHQLSREAVLAQLD-RDEHARLAGALATAVEAIH 381 Query: 158 MPFS----SQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFH 213 A D + GT E R L + Y+ Sbjct: 382 PGLPREWCEAAARLRVDAGDRATAGTLFTEAG-RRALALGAANSAVAVLDRALEYLPHDD 440 Query: 214 HSIYKDHFISVLLRFFLHGQLKLPDEDIVFT--ISFFSLEEQRAIYLKIAQNSVISGKRK 271 + +L G ++ + + A++ ++A + I+G+ + Sbjct: 441 VATRAGTLELLLQALAEAGLVERALASVSELDQAGGLGPRRRAALHTRLAWAATIAGRTE 500 Query: 272 IGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYL 331 G ++ + ++ + ++ +D+++ L +R Sbjct: 501 DGLAQVETARALLGSEGSAE-----------DLAPIDVVAAHLLLDAAGPDQLAAAERLA 549 Query: 332 KKASE 336 ++A+E Sbjct: 550 RQAAE 554 >gi|115487572|ref|NP_001066273.1| Os12g0170700 [Oryza sativa Japonica Group] gi|113648780|dbj|BAF29292.1| Os12g0170700 [Oryza sativa Japonica Group] Length = 506 Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 48/146 (32%), Gaps = 5/146 (3%) Query: 240 DIVFTISFFSLEEQRAIYLKIAQNSVI--SGKRKIGFLAIKQLKRIIDR--LDYKDLATI 295 D+V ++ E+ + L AQ +V+ G + A K+ I L Sbjct: 322 DLVPILAHQYFSEKLPVTLHGAQAAVLFCMGLQDKDIGATKEELGIEREQVLSNFIKTMK 381 Query: 296 QLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQ 355 +LY + NI +I + I L D L +A+ + + +++ + D + Sbjct: 382 KLYGYLHNIAGKEIEATLPRLKEIDTAPLKSLDEDLDEAAREVKEQ-RRAIDEDDVDPKF 440 Query: 356 KDLLLDKKEPRHTNVSMGIESFIKKN 381 + ++ Sbjct: 441 LQKYAIDADDDEIEKALNGGKISASG 466 >gi|146303616|ref|YP_001190932.1| protein kinase [Metallosphaera sedula DSM 5348] gi|145701866|gb|ABP95008.1| protein kinase [Metallosphaera sedula DSM 5348] Length = 650 Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 10/100 (10%) Query: 82 IDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFS-GQLEESSKELSKIKDKD 140 DA+ + ++ + A + +DI V Y + ++EE+ + ++ Sbjct: 205 ADALITEFEKQGNPKLL--IEALNVLPTYDIPAVKLGLHYLNKNKVEEAVNMFEEALRRN 262 Query: 141 NTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYV---RLTSP 177 L LL + ++A+ D R T+P Sbjct: 263 RN---FQNLVLLGSALL-RKDPKRALEVLDEAQKIRRTAP 298 >gi|194225941|ref|XP_001499447.2| PREDICTED: laminin, gamma 3 [Equus caballus] Length = 1472 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 12/131 (9%), Positives = 34/131 (25%), Gaps = 14/131 (10%) Query: 261 AQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIP 320 AQ ++++ L Y+ + Q+ Sbjct: 1074 AQRALLASNTSYVLLWS---LLEGKVALEAQQELEDRYQA--------VQEAQKELGAAV 1122 Query: 321 YYSLMEQDRYLKKASEIIMSEIGKS---LIDIDFEHIQKDLLLDKKEPRHTNVSMGIESF 377 +L E +R L +++ + + + + LD + E Sbjct: 1123 AEALPEAERVLAAVQQVVTDTGLRPASLPVPVALPQAARAGDLDPRLQALEKTVASRERV 1182 Query: 378 IKKNRSQIESI 388 + + +++ Sbjct: 1183 VTEAARALQAT 1193 >gi|157273492|gb|ABV27391.1| aspartate aminotransferase [Candidatus Chloracidobacterium thermophilum] Length = 405 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 5/91 (5%) Query: 125 QLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTS-PGTFL-- 181 + + L+++ + ++ SS+ A+ D R+ + PGT Sbjct: 313 RRDRLIAGLAELGLPVKPVPNGAFYVFPDVSSLGGTSSEIAMRLLDEARVATVPGTAFGC 372 Query: 182 -EEIALRNLLEITQNEVGERAFGYIRAYVTQ 211 E LR ++ ER + Y+ + Sbjct: 373 AGEGHLRLSYSLSLEA-IERGLAALGEYLRR 402 >gi|167521207|ref|XP_001744942.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776556|gb|EDQ90175.1| predicted protein [Monosiga brevicollis MX1] Length = 869 Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 59/163 (36%), Gaps = 10/163 (6%) Query: 166 VHFFDYVRLTSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVL 225 + R+ P T + AL +E+ + + R ++ + +F VL Sbjct: 461 IKHLRTARVAMPLTIDQYRAL--TVEVIIDRLIARGVHWLAHEICKFLKLENMRAMNKVL 518 Query: 226 L--RFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIG-FLAIKQLKR 282 + + + DE + + + +++IAQ + SG+R++ L ++ Sbjct: 519 VHWARTVISKHDGSDEQVADILIRKLAHKTGIRFVEIAQAAAASGRRELAVRLVKQEA-- 576 Query: 283 IIDRLDYKDLATIQLYENILN--IPFVDIMSLQRSTCNIPYYS 323 RL L + YE+ L + D + + ++ Sbjct: 577 -SARLQVPALLEFREYEDALRRALLSGDPDMITVALEHLKKAQ 618 >gi|116622586|ref|YP_824742.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225748|gb|ABJ84457.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 907 Score = 37.3 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 9/108 (8%), Positives = 26/108 (24%), Gaps = 10/108 (9%) Query: 260 IAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNI 319 +A+ + G+ + + + L ++ + D S Sbjct: 743 VARALIQEGETDAAKPFLAKALELGPGLG-----RAWFFQAAVQKADGDYDGALHSLER- 796 Query: 320 PYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRH 367 + +DR + I + + + + E Sbjct: 797 -ARAQYPRDRVVLN---QIARILFLKRDYAGAVAVLRQVCDVDPEDVQ 840 >gi|198284469|ref|YP_002220790.1| tetratricopeptide repeat-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248990|gb|ACH84583.1| Tetratricopeptide TPR_2 repeat protein [Acidithiobacillus ferrooxidans ATCC 53993] Length = 553 Score = 37.3 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 16/158 (10%) Query: 148 YLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLL-EITQNEVGERAFGYIR 206 Y L+ A + Q A+ + +P E LR I + + A R Sbjct: 36 YYLLVAEFATVQRQPQLAIPAWQKAAKLAP----EPNVLRRATQAIARFGDFQDALQLAR 91 Query: 207 AYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVI 266 + S D F + L GQ + + + T++ F + + + L+ A+ V Sbjct: 92 RWRQAAPGSAEADQFEAAL--LLTTGQDEQALQLLQATLARFPDDPK--VTLQFAELLVT 147 Query: 267 SGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNI 304 G+ + +R++ L KD + Y + I Sbjct: 148 HGR-------SGEARRLLSALADKDPKSAAAYYALGRI 178 >gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii] gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii] Length = 818 Score = 37.3 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 91/252 (36%), Gaps = 21/252 (8%) Query: 91 ISQDLSVVDDLIAKDTKGYFDIAIV---YALKKYFS-GQLEESSKELSKIKDKDNTRGIV 146 LS V L A+ ++ + +V + Y G LEE+ + + K+K +V Sbjct: 456 SLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKT----VV 511 Query: 147 PYLHLLIG-RAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQ-NEVGERAFGY 204 + ++ + +A+ F + L G +++ ++L + E+ + Y Sbjct: 512 SWTAMVAAFSQYGRY--AEALDLFQEMDLE--GVKPDDVTYTSILFVCTHGGSLEQGWRY 567 Query: 205 IRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNS 264 + DHF + ++ ++++ ++ F +L + Sbjct: 568 FTDMAELHALAPTADHFAA-MVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACR-- 624 Query: 265 VISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENIL---NIPFVDIMSLQRSTCNIPY 321 I GK ++G A +++ + +A +Y + V +R +P Sbjct: 625 -IHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPG 683 Query: 322 YSLMEQDRYLKK 333 S +E D L + Sbjct: 684 LSFIEVDGKLHE 695 >gi|242039377|ref|XP_002467083.1| hypothetical protein SORBIDRAFT_01g019330 [Sorghum bicolor] gi|241920937|gb|EER94081.1| hypothetical protein SORBIDRAFT_01g019330 [Sorghum bicolor] Length = 1165 Score = 37.3 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 226 LRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIID 285 L+ + D+ F +S +EQ A+Y IA+ + + + L ++ R+ Sbjct: 479 LKAAADSAFEDTDDTEYFHVSVSKRDEQLALYALIARAAADTTIPFLAQLFSERFARLNQ 538 Query: 286 RLDYKDLATIQ--LY 298 R D LY Sbjct: 539 RNGESDPTQTLEELY 553 >gi|315187458|gb|EFU21214.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta thermophila DSM 6578] Length = 454 Score = 37.3 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 28/262 (10%), Positives = 77/262 (29%), Gaps = 16/262 (6%) Query: 61 VKETGVQLRATHMDVFVDNRNIDAVWIY---TIISQDLSVVDDLIAKDTKGYFD---IAI 114 + ++A + + +Y +++ + + +++ + Y D Sbjct: 47 LGRPEDAIKAFEEASARAPEDPETRLLYVNLLLMAGKETEAEAELSRLLEEYPDHVGALY 106 Query: 115 VYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRL 174 AL + G+ EE + L ++ D L + +A F V Sbjct: 107 TLALLEGARGREEEHRRLLERVLALD-PHHTGARAAL-GELLLSKKQYARAEKEFTTVLE 164 Query: 175 TSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 PG + + + E+A + + Q + + + + + Sbjct: 165 EDPGDLV--ALVGLGNVYLRTRKAEKAAEVLTQAIRQAPDYPFA--YADRARAWQMLDEP 220 Query: 235 KLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLAT 294 + ++DI I Y + A+ + G+ + + + + Sbjct: 221 EKAEQDISRAI-ELDPGFSWHYYDR-ARILISEGQMDRALEDLSRAILLDPSNFLAYVYR 278 Query: 295 IQLYEN--ILNIPFVDIMSLQR 314 ++Y+ ++ D Sbjct: 279 ARIYDGKEMMKEACSDYARALE 300 >gi|18415518|ref|NP_567603.1| receptor-like protein kinase-related [Arabidopsis thaliana] gi|18415520|ref|NP_567604.1| receptor-like protein kinase-related [Arabidopsis thaliana] gi|18415522|ref|NP_567605.1| receptor-like protein kinase-related [Arabidopsis thaliana] gi|18415525|ref|NP_567606.1| receptor-like protein kinase-related [Arabidopsis thaliana] gi|18415527|ref|NP_567607.1| receptor-like protein kinase-related [Arabidopsis thaliana] gi|18415529|ref|NP_567608.1| receptor-like protein kinase-related [Arabidopsis thaliana] gi|18415531|ref|NP_567609.1| receptor-like protein kinase-related [Arabidopsis thaliana] gi|18415533|ref|NP_567610.1| receptor-like protein kinase-related [Arabidopsis thaliana] gi|18415535|ref|NP_567611.1| receptor-like protein kinase-related [Arabidopsis thaliana] gi|18415537|ref|NP_567612.1| receptor-like protein kinase-related [Arabidopsis thaliana] gi|18415540|ref|NP_567613.1| receptor-like protein kinase-related [Arabidopsis thaliana] gi|18415542|ref|NP_567614.1| receptor-like protein kinase-related [Arabidopsis thaliana] gi|5262176|emb|CAB45819.1| putative protein [Arabidopsis thaliana] gi|5262177|emb|CAB45820.1| putative protein [Arabidopsis thaliana] gi|5262178|emb|CAB45821.1| putative protein [Arabidopsis thaliana] gi|5262179|emb|CAB45822.1| putative protein [Arabidopsis thaliana] gi|5262180|emb|CAB45823.1| putative protein [Arabidopsis thaliana] gi|5262181|emb|CAB45824.1| putative protein [Arabidopsis thaliana] gi|5262182|emb|CAB45825.1| putative protein [Arabidopsis thaliana] gi|5262183|emb|CAB45826.1| putative protein [Arabidopsis thaliana] gi|5262184|emb|CAB45827.1| putative protein [Arabidopsis thaliana] gi|5262185|emb|CAB45828.1| putative protein [Arabidopsis thaliana] gi|5262186|emb|CAB45829.1| putative protein [Arabidopsis thaliana] gi|5262187|emb|CAB45830.1| putative protein [Arabidopsis thaliana] gi|7268849|emb|CAB79053.1| putative protein [Arabidopsis thaliana] gi|7268850|emb|CAB79054.1| putative protein [Arabidopsis thaliana] gi|7268851|emb|CAB79055.1| putative protein [Arabidopsis thaliana] gi|7268852|emb|CAB79056.1| putative protein [Arabidopsis thaliana] gi|7268853|emb|CAB79057.1| putative protein [Arabidopsis thaliana] gi|7268854|emb|CAB79058.1| putative protein [Arabidopsis thaliana] gi|7268855|emb|CAB79059.1| putative protein [Arabidopsis thaliana] gi|7268856|emb|CAB79060.1| putative protein [Arabidopsis thaliana] gi|7268857|emb|CAB79061.1| putative protein [Arabidopsis thaliana] gi|7268858|emb|CAB79062.1| putative protein [Arabidopsis thaliana] gi|7268859|emb|CAB79063.1| putative protein [Arabidopsis thaliana] gi|7268860|emb|CAB79064.1| putative protein [Arabidopsis thaliana] gi|332658939|gb|AEE84339.1| cysteine-rich repeat secretory protein 54 [Arabidopsis thaliana] gi|332658940|gb|AEE84340.1| cysteine-rich repeat secretory protein 53 [Arabidopsis thaliana] gi|332658949|gb|AEE84349.1| cysteine-rich repeat secretory protein 44 [Arabidopsis thaliana] Length = 468 Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 16/165 (9%), Positives = 48/165 (29%), Gaps = 6/165 (3%) Query: 222 ISVLLRFFLHGQLKLPDEDIVF-TISFFSLEEQRAI-YLKIAQNSVISGKRKIGFLAIKQ 279 + ++K +++ +S +R + Y + + S + ++ + + Sbjct: 305 ADLARSQDDAKEMKRKYDELAGRALSEMKRLRERRLEYAEFVRRSALDKMAELVQKRLDR 364 Query: 280 LKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKK--ASEI 337 +K ID + ++ + + + D L+ LM+ D ++ A Sbjct: 365 IKAHIDDTKAAEPKFLEFNQMLRLVA--DAEELEAEVKAFGITDLMDGDFDVRTLFAELS 422 Query: 338 IMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNR 382 + + + + + I R Sbjct: 423 PDNRNSVPPPTEGEDLADGRGECEGQAGERIVGQTEVRDEIADAR 467 >gi|163795702|ref|ZP_02189667.1| TPR repeat [alpha proteobacterium BAL199] gi|159178998|gb|EDP63533.1| TPR repeat [alpha proteobacterium BAL199] Length = 808 Score = 37.3 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 27/237 (11%), Positives = 63/237 (26%), Gaps = 50/237 (21%) Query: 186 LRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTI 245 L + Q+ A +R + + S L GQ+ + +++ + Sbjct: 13 LSRAQLLVQSGNLTGARHCVRRVLAEDPAST---------SALTLAGQISVRADEVRDAV 63 Query: 246 SFFSLEEQRA------IYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYE 299 +FS L +A+ ++G + + + Sbjct: 64 RYFSRASHAEHHSDPRALLNLARAEELAGHARAALATTSRAATLFPEDP---RPRAL--A 118 Query: 300 NILNIPFVDIMSLQRSTCNIPYYSLME--------------------QDRY---LKKASE 336 +L++ + L +DR L +A+ Sbjct: 119 ALLHLSTGQPAQALEVLRDGDAGRLDPDMAYKIGNRLSALAPNQPSVRDRAMVFLLRAAS 178 Query: 337 IIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQIESIDVLLA 393 + +L D+ +D + + + K+ I+SI+ L Sbjct: 179 NPGRFLEPALQDLLAIAGPED-------RHRYDAARRLLVLNPKSAEAIDSIEGDLG 228 >gi|56695967|ref|YP_166321.1| putative FAD-binding dehydrogenase [Ruegeria pomeroyi DSS-3] gi|56677704|gb|AAV94370.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3] Length = 553 Score = 37.3 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 29/113 (25%), Gaps = 19/113 (16%) Query: 39 LQRALDEAMRG--------DISLQKKIPDIVKETGVQLRATHMDVFVDNRN--------I 82 L+R D G +S ++ A N + Sbjct: 156 LRRVQDHVAAGRIEMRFRHQVSHIIMQNGAATGVSGEVLAEDSAQRGQRTNRDEIGEFEV 215 Query: 83 DAVWIYTIISQ---DLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKE 132 A I + +V +D G +V + + G++ S+ Sbjct: 216 YAPSILVTSGGIGGNFDLVRKAWPRDRLGAPPPNMVAGVPFHVDGRMIAISER 268 >gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii] gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii] Length = 818 Score = 37.3 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 91/252 (36%), Gaps = 21/252 (8%) Query: 91 ISQDLSVVDDLIAKDTKGYFDIAIV---YALKKYFS-GQLEESSKELSKIKDKDNTRGIV 146 LS V L A+ ++ + +V + Y G LEE+ + + K+K +V Sbjct: 456 SLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKT----VV 511 Query: 147 PYLHLLIG-RAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQ-NEVGERAFGY 204 + ++ + +A+ F + L G +++ ++L + E+ + Y Sbjct: 512 SWTAMVAAFSQYGRY--AEALDLFQEMDLE--GVKPDDVTYTSILFVCTHGGSLEQGWRY 567 Query: 205 IRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNS 264 + DHF + ++ ++++ ++ F +L + Sbjct: 568 FTDMAELHGLAPTADHFAA-MVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACR-- 624 Query: 265 VISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENIL---NIPFVDIMSLQRSTCNIPY 321 I GK ++G A +++ + +A +Y + V +R +P Sbjct: 625 -IHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPG 683 Query: 322 YSLMEQDRYLKK 333 S +E D L + Sbjct: 684 LSFIEVDGKLHE 695 >gi|194100294|ref|YP_002003492.1| gp16 [Enterobacteria phage BA14] gi|193201289|gb|ACF15769.1| gp16 [Enterobacteria phage BA14] Length = 1315 Score = 36.9 bits (84), Expect = 4.9, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 28/92 (30%), Gaps = 8/92 (8%) Query: 4 KYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKI--PDIV 61 K + AMD++ A + P++ D G + ++ Sbjct: 1058 KRKLANDPRAMDLWR-LADKVADETMLRPHKV-----SLQDSHAFGAAAKLVLQFKSFVI 1111 Query: 62 KETGVQLRATHMDVFVDNRNIDAVWIYTIISQ 93 K + + + ++R +D Y I Sbjct: 1112 KSMNAKFIRSGHEAMKNHRAMDMALTYAISGG 1143 >gi|153870129|ref|ZP_01999592.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152073405|gb|EDN70408.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 780 Score = 36.9 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 14/220 (6%) Query: 147 PYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQNEVGERAFGYIR 206 P L L A + A+ + R P EEI + + + Sbjct: 369 PELVLEYVEANSENDPELAISLLEKARQRWPEQ--EEITFTMAGAYDAIGEHQYSMTLLS 426 Query: 207 AYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIA-QNSV 265 Y+ + S +VL + DE FT E + L ++ Sbjct: 427 QYLESYPDSP-----QTVLAYGTFLLEEGGTDELQNFTAGLLKRELSEQVQLNCHWLLAL 481 Query: 266 ISGKRKIGFLAIKQLKRIIDRLDYKDLA---TIQLYENILNIPFVDIMSLQRST-CNIPY 321 K++ A +QL ++ R A +L + N+ + Sbjct: 482 EYTKQEEFESAKQQLSILLARNPNAANAKTLLARLERKMGNLTA--ALQHLDELVEQFDE 539 Query: 322 YSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLD 361 + +R + ++ S + FE++ + ++ Sbjct: 540 ADQHDWERMIVATLLEDWDKVRHSAKRLGFENLPTEGPIE 579 >gi|332521272|ref|ZP_08397728.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix algicola 5H-3-7-4] gi|332043000|gb|EGI79198.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix algicola 5H-3-7-4] Length = 1005 Score = 36.9 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 92/274 (33%), Gaps = 18/274 (6%) Query: 120 KYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFS-SQQAVHFFDYVRLTSPG 178 +Y + K+ K + H + + + +Q+A + YV S Sbjct: 731 QYLDDNTNNAIKQFEKYNREFKNGLHATQAHFYLAQLYFKENENQKAAPNYRYVVDASQS 790 Query: 179 TFLEEIALRNLLEITQNEVGERAFGYIRAYVTQ--FH-HSIYKDHFISVLLRFFLHGQLK 235 F EE LR + + E A ++ T+ F +S++ + Sbjct: 791 EFTEEALLRLSQITLEKKDWENALPILKRLETEANFPQNSLFAQSNLMQANYQLKKYNDA 850 Query: 236 LPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATI 295 + + V + S + + + IA++++ +G LA +Q++ + + Sbjct: 851 VAYAEKVLSHSTLDNKVKSDAQVIIARSAIKTGNEAKAKLAYEQVELTATGVTAAEALYY 910 Query: 296 QLY-ENILNIPFVDIMSLQRSTCNIPYYS---------LMEQDRYLKKA--SEIIMSEIG 343 Y +N + + QR + Y + + L A + I+ I Sbjct: 911 NAYFKNKAGAYQNSLKATQRLVKDFSSYRYYGAKGLIVMAKNQYALNDAFQATYILESIP 970 Query: 344 KSLIDIDFEHIQKDLLLD--KKEPRHTNVSMGIE 375 K+ + + + L K E TN S+ + Sbjct: 971 KNFGEFEDVVAEAAEELSKIKAEEAKTNASVDTQ 1004 >gi|260062000|ref|YP_003195080.1| hypothetical protein RB2501_10422 [Robiginitalea biformata HTCC2501] gi|88783562|gb|EAR14733.1| hypothetical protein RB2501_10422 [Robiginitalea biformata HTCC2501] Length = 1006 Score = 36.9 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 32/253 (12%), Positives = 71/253 (28%), Gaps = 22/253 (8%) Query: 84 AVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYAL-----KKYFSGQLEESSKELSKIKD 138 A IY + Q + D D + A K+ G +++ L K + Sbjct: 689 AKLIYVDMGQVDQYAAWVRGLDFVEVTDSELEAASFEAAEKQLVEGNDAAAARALEKYLE 748 Query: 139 KDNTR--GIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQNE 196 + + Y +L + +A+ F+ V G E+ R + Sbjct: 749 QFPNGANRVAAYFNLGQIA-YADGQADKALAHFEVVADAGRGERAEQALTRVCEILVSRG 807 Query: 197 VGERAFGYIRAYVTQFHHS---IYKDHFIS--VLLRFFLHGQLKLPDEDIVFTISF--FS 249 + Y+ + + F ++ +F ++ Sbjct: 808 D----YAAAMPYLERLEATADIPQNRTFAQSNLMKGYFEKQAYDRTLAYAEKVLASPSLD 863 Query: 250 LEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDI 309 + L IA+++ +G + A ++ I + A Y+ D Sbjct: 864 DRIRSDARLMIARSAWATGNTEKARQAYAEVLSIA---TGRAAAEALYYQAHFKREDGDF 920 Query: 310 MSLQRSTCNIPYY 322 + +S + Sbjct: 921 EASNQSVQRLARD 933 >gi|154287492|ref|XP_001544541.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150408182|gb|EDN03723.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 774 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 40/146 (27%), Gaps = 30/146 (20%) Query: 251 EEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIM 310 +E + L A+ + + + L+ ++ D A Sbjct: 98 DEPSDLELLQAKRA-----KALASLSQRRASSHGANSGNADAAR---------------- 136 Query: 311 SLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNV 370 + ++ S D+ L + + KD + P Sbjct: 137 RSSGTLASLTQGSESAIDQPLHAKGSAAAR---------NAKSSDKDTPAAAESPSGRMG 187 Query: 371 SMGIESFIKKNRSQIESIDVLLAEAR 396 ++ + + E ID LLAE R Sbjct: 188 AVEQQKPHPNQIASAEDIDGLLAEGR 213 >gi|212671419|ref|YP_002308419.1| internal virion protein D [Kluyvera phage Kvp1] gi|211997263|gb|ACJ14580.1| internal virion protein D [Kluyvera phage Kvp1] Length = 1315 Score = 36.9 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 28/92 (30%), Gaps = 8/92 (8%) Query: 4 KYLICTMMVAMDVFFSFATDQDLVRTIVPYQCVRSLQRALDEAMRGDISLQKKI--PDIV 61 K + AMD++ A + P++ D G + ++ Sbjct: 1058 KRKLANDPRAMDLWR-LADKVADETMLRPHKV-----SLQDSHAFGAAAKLVLQFKSFVI 1111 Query: 62 KETGVQLRATHMDVFVDNRNIDAVWIYTIISQ 93 K + + + ++R +D Y I Sbjct: 1112 KSMNSKFIRSGHEAMKNHRAMDMALTYAISGG 1143 >gi|184200862|ref|YP_001855069.1| glucose-6-phosphate 1-dehydrogenase [Kocuria rhizophila DC2201] gi|183581092|dbj|BAG29563.1| glucose-6-phosphate 1-dehydrogenase [Kocuria rhizophila DC2201] Length = 510 Score = 36.9 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 8/72 (11%) Query: 197 VGERAFGYIRAYVTQFHHSIYKDHFISVLLRF--FLHGQLKLPD--EDIVFTISFFSLEE 252 + Y++ +VT+ + Y + + F+HG+ D + + T+ + Sbjct: 67 DNAQFAEYVKEHVTEHARTPYNEDLWNQFASGLRFVHGEFDDDDAYDRLAQTLDELDRDR 126 Query: 253 Q----RAIYLKI 260 A YL I Sbjct: 127 GTRGNHAFYLSI 138 >gi|289548649|ref|YP_003473637.1| hypothetical protein Thal_0878 [Thermocrinis albus DSM 14484] gi|289182266|gb|ADC89510.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM 14484] Length = 850 Score = 36.9 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 29/230 (12%), Positives = 66/230 (28%), Gaps = 22/230 (9%) Query: 99 DDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMM 158 + + + ++ A G ++ L+ D++ L+LL M Sbjct: 449 EVITTLEKDDRLQARLLKAEAYLLLGNPAKARSYLTPQTDRE--------LYLLGLSYFM 500 Query: 159 PFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYK 218 +AV FF V +SP + L+ +A R + ++ + Y Sbjct: 501 EEDYNKAVEFFSRVPESSP--LRPQALLKMGDAFYNMGDLSKAQETYRKVIEEYPDTPYA 558 Query: 219 DHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEE--QRAIYLKIAQNSVISGKRKIGFL- 275 LL + ++ + + + L++A+ + + Sbjct: 559 RQATLALLEAKPTNMNIEQETKLIEDYLKKDPDSPTAQHLKLQLAKLYIQQNRLSDAQRL 618 Query: 276 ---------AIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRST 316 + L + D + LY+ P D ++ Sbjct: 619 LLDLVGTPVESRALLLLADIEPDVKKRLVLLYKVYKEGPPTDAQLARQKL 668 >gi|197120101|ref|YP_002140528.1| bifunctional SAM-dependent methyltransferase, type 11,/glycosyltransferase, family 2, TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|197089461|gb|ACH40732.1| SAM-dependent methyltransferase, type 11, and glycosyltransferase, family 2, TPR domain-containing protein [Geobacter bemidjiensis Bem] Length = 1523 Score = 36.9 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 71/213 (33%), Gaps = 18/213 (8%) Query: 73 MDVFVDNRNIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKE 132 ++ + + DA W DL+ ++ A + A++ K G+L ++ + Sbjct: 849 AAMWKNRKAFDAKW-------DLAALEQGTAARVVTH--NAMLRGAKLARRGKLNDAVEL 899 Query: 133 LSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEI 192 + + + + PYL L G + ++A+ + V P + AL Sbjct: 900 MLQEGIRFSPASPAPYLALA-GILCEAGNWREALEVLEQV----PAGCELDAALMRGRAF 954 Query: 193 TQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEE 252 ++ +A + + + G+ + +E + I+ Sbjct: 955 KESGEPAQAVEAAKQAEGIDPEAP--GTLHLNGVLALSQGEAEKGEELLRRAIT-ADPGF 1011 Query: 253 QRAIYLKIAQNSVISGKRKIGFLAIKQLKRIID 285 Y +AQ + G+R+ G + + Sbjct: 1012 ALP-YGALAQTAWERGEREQGVRLAELAFVLSP 1043 >gi|283781582|ref|YP_003372337.1| alanyl-tRNA synthetase [Pirellula staleyi DSM 6068] gi|283440035|gb|ADB18477.1| alanyl-tRNA synthetase [Pirellula staleyi DSM 6068] Length = 935 Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 43/151 (28%), Gaps = 12/151 (7%) Query: 246 SFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIP 305 + + IA+ V +G R+I L ++ K ++ L L Sbjct: 662 THLDNTRDVLAFEIIAEEGVAAGTRRIVALTGEKAKSFSEKTSTALNELANLLGVELLA- 720 Query: 306 FVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEP 365 + R+ +D + AS S S K Sbjct: 721 ---VPQAVRTLAQ------QVRDLKKQLASGGKGSTTETSPPRGTVSMAPPSAAQIKAAL 771 Query: 366 RHTNVSMGIESFIKKNRSQ--IESIDVLLAE 394 + T ++ + F R+ +E + L + Sbjct: 772 KETARTLNVGPFDAPARAAAMLEEVTTLTKQ 802 >gi|301063225|ref|ZP_07203774.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300442653|gb|EFK06869.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 920 Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 55/187 (29%), Gaps = 26/187 (13%) Query: 218 KDHFISVLLR---FFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGF 274 +HF S+ F + + + + +S R +YL +A +I G Sbjct: 658 AEHFRSLKSAGIEAFKNRRFGDAHQALQKALSLKED---REVYLYLAYTQMILGDAS--- 711 Query: 275 LAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYY-SLMEQDRYLKK 333 A ++ + ++LY+ +++ + + D LK Sbjct: 712 -ASEETLE---KGIAAFPYEVRLYQVYARQLAAR-GENEKALKLVDRALQMSPDDPTLK- 765 Query: 334 ASEIIMSEIGKSLIDIDF-----EHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQIESI 388 +I + QK L+K S + S+ Sbjct: 766 ---VIRQNLTAPPASERQFSNKKPAPQKARPLEKA--VEGAASAKWQGIASFKASKYTEA 820 Query: 389 DVLLAEA 395 + LL+ + Sbjct: 821 EKLLSRS 827 >gi|115482520|ref|NP_001064853.1| Os10g0477000 [Oryza sativa Japonica Group] gi|78708814|gb|ABB47789.1| expressed protein [Oryza sativa Japonica Group] gi|113639462|dbj|BAF26767.1| Os10g0477000 [Oryza sativa Japonica Group] Length = 1166 Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Query: 226 LRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIID 285 L+ + D+ F +S +EQ A+Y +IA+++ + + L ++ R+ Sbjct: 479 LKAAADSAFEDTDDAEYFHVSVSKRDEQLALYAQIARSAADTTIPFLAQLFSERFARLSQ 538 Query: 286 RLDYKDLATIQ--LY 298 R D LY Sbjct: 539 RNGENDPTQTLEELY 553 >gi|222613005|gb|EEE51137.1| hypothetical protein OsJ_31887 [Oryza sativa Japonica Group] Length = 1025 Score = 36.6 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Query: 226 LRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIID 285 L+ + D+ F +S +EQ A+Y +IA+++ + + L ++ R+ Sbjct: 417 LKAAADSAFEDTDDAEYFHVSVSKRDEQLALYAQIARSAADTTIPFLAQLFSERFARLSQ 476 Query: 286 RLDYKDLATIQ--LY 298 R D LY Sbjct: 477 RNGENDPTQTLEELY 491 >gi|218184739|gb|EEC67166.1| hypothetical protein OsI_34027 [Oryza sativa Indica Group] Length = 1025 Score = 36.6 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Query: 226 LRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIID 285 L+ + D+ F +S +EQ A+Y +IA+++ + + L ++ R+ Sbjct: 417 LKAAADSAFEDTDDAEYFHVSVSKRDEQLALYAQIARSAADTTIPFLAQLFSERFARLSQ 476 Query: 286 RLDYKDLATIQ--LY 298 R D LY Sbjct: 477 RNGENDPTQTLEELY 491 >gi|239834060|ref|ZP_04682388.1| FAD-binding dehydrogenase [Ochrobactrum intermedium LMG 3301] gi|239822123|gb|EEQ93692.1| FAD-binding dehydrogenase [Ochrobactrum intermedium LMG 3301] Length = 552 Score = 36.6 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 13/39 (33%) Query: 92 SQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESS 130 D V +D G +V + + G+ + + Sbjct: 226 GGDPDKVRRAWPRDRLGNPPKEMVLGVPAHVDGRGIDIA 264 >gi|299065274|emb|CBJ36442.1| conserved protein of unknown function, tpr repeat domain [Ralstonia solanacearum CMR15] Length = 700 Score = 36.6 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 94/360 (26%), Gaps = 37/360 (10%) Query: 38 SLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYTIISQDLSV 97 S Q DEA + P +V L +V + + T+ + Sbjct: 194 SAQGRHDEAAAAAQHAIELSPRLV---DAYLNLAEAEVGRHRHEAALLVLDTLSTFAPQH 250 Query: 98 VDDLIAK-DTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRA 156 L A+ + + + + + R + L Sbjct: 251 PAALTARANVLKRAERP-----------DEALAVARQAVVLA---PRSAEAHHALATALQ 296 Query: 157 MMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSI 216 + + + HF RL PG EE + + + + + A + QF S+ Sbjct: 297 TLGQTDEALPHFEQAARL--PGAVAEEALVGRAILLMEAGRRDAARAAFDQALAQFPGSV 354 Query: 217 YKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLA 276 L D DI + + E+R++ +I+ A Sbjct: 355 ------QALAGRADARTFTAGDPDIAALEACLADGERRSLRDRIS-----------AHFA 397 Query: 277 IKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASE 336 + + + + D + R I E L E Sbjct: 398 LGKAYLDLQDPARAFHHLDAGNRQKRSTFTYDAAASSRWMERIAEAFSPELYDQLHATGE 457 Query: 337 IIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQIESIDVLLAEAR 396 + + + + ++ + + ++ + + + L +EAR Sbjct: 458 PSALPVFIVGMPRSGTTLIEQIVSSHPQVMGAGELSALRLVVEGSGLFPDGLQGLASEAR 517 >gi|298529797|ref|ZP_07017200.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511233|gb|EFI35136.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] Length = 568 Score = 36.6 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 39/146 (26%), Gaps = 27/146 (18%) Query: 182 EEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDI 241 E+ AL + R Y+ Q G+ + + + Sbjct: 56 EKAALALEKALVLGPSVRLYQDLAREYLRQ--------------------GEKQKAVDIL 95 Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYENI 301 + +Y ++A+ ++ G R A+++ K ++ Y Sbjct: 96 QDATGIYPRTP--ELYFQMAEFYLVKGDRSGAVKALEKYKDLVPEDLDVYEDLAAFY--- 150 Query: 302 LNIPFVDIMSLQRSTCNIPYYSLMEQ 327 I D IP + + Sbjct: 151 --IEMRDYAGAVDLLQEIPPDEMTPE 174 >gi|283781243|ref|YP_003371998.1| glycosyl hydrolase family 98 carbohydrate binding module [Pirellula staleyi DSM 6068] gi|283439696|gb|ADB18138.1| Glycosyl hydrolase family 98 putative carbohydrate binding module [Pirellula staleyi DSM 6068] Length = 620 Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 8/65 (12%), Positives = 20/65 (30%), Gaps = 1/65 (1%) Query: 289 YKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSL-MEQDRYLKKASEIIMSEIGKSLI 347 + +L I D + + + S E D+ L + + ++ + I + Sbjct: 416 SAYQSQAKLVPITAAIAASDSQGIASAIQKLEASSTGSEADQKLLEVARVLATTISRERK 475 Query: 348 DIDFE 352 Sbjct: 476 VAPAA 480 >gi|256390298|ref|YP_003111862.1| LuxR family transcriptional regulator [Catenulispora acidiphila DSM 44928] gi|256356524|gb|ACU70021.1| transcriptional regulator, LuxR family [Catenulispora acidiphila DSM 44928] Length = 919 Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 31/93 (33%), Gaps = 5/93 (5%) Query: 81 NIDAVWIYTIISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKD 140 N+DA ++ + + L A V + + + L+ +++ Sbjct: 204 NLDA--VHGASGGNPQYLRILSADGDPHADAARAVVGELADLDPRTLTTLQTLAVLREPS 261 Query: 141 NTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVR 173 + + I L A+ + ++ D VR Sbjct: 262 HPQLIAAVAELSAAEAL---DALDSLTRLDIVR 291 >gi|240128947|ref|ZP_04741608.1| hypothetical protein NgonS_10057 [Neisseria gonorrhoeae SK-93-1035] gi|268687332|ref|ZP_06154194.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|268627616|gb|EEZ60016.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 389 Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 48/171 (28%), Gaps = 10/171 (5%) Query: 115 VYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRL 174 + AL SG+ E+ + + L+L +G+ L Sbjct: 48 LDALVDRNSGRAARELAEVVDGRPQSYD------LNLTLGKLYRQRGENDKAINIHRTML 101 Query: 175 TSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQL 234 SP T E+ A R L E+ QN LL + + Sbjct: 102 DSPDTVGEKRA-RVLFELAQNYQSAGLVDRAEQIFLGLQDGEMAREARQHLLNIYQQDRD 160 Query: 235 KLPDEDIVFTISFFSLEEQRAI---YLKIAQNSVISGKRKIGFLAIKQLKR 282 + +S Q I Y ++AQ ++ + + + Sbjct: 161 WEKAVETAQLLSHDEQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALE 211 >gi|163761257|ref|ZP_02168333.1| hypothetical protein HPDFL43_10891 [Hoeflea phototrophica DFL-43] gi|162281596|gb|EDQ31891.1| hypothetical protein HPDFL43_10891 [Hoeflea phototrophica DFL-43] Length = 573 Score = 36.6 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 4/76 (5%) Query: 60 IVKETGVQLRATHMDVFVDNRNIDAVWIYTIISQ---DLSVVDDLIAKDTKGYFDIAIVY 116 + + + R+T DV D + A + +L +V + G ++ Sbjct: 215 LAADASERGRSTSRDVIGDFE-LRAPSVLVTSGGIGGNLDLVRKAWPRKRLGEPPENMIS 273 Query: 117 ALKKYFSGQLEESSKE 132 + + G++ ++ Sbjct: 274 GVPAHVDGRMIAIAEA 289 >gi|196234175|ref|ZP_03133007.1| heme-binding protein [Chthoniobacter flavus Ellin428] gi|196221734|gb|EDY16272.1| heme-binding protein [Chthoniobacter flavus Ellin428] Length = 1142 Score = 36.2 bits (82), Expect = 8.3, Method: Composition-based stats. Identities = 16/177 (9%), Positives = 44/177 (24%), Gaps = 15/177 (8%) Query: 226 LRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIID 285 L + + + A + + R+ + Sbjct: 774 LDALADWNEPFHRDRVNGLWHPLPPSRNAEAPVASAAKIIPALLREPSEKMRLAAAGMAG 833 Query: 286 RLDYKDLATIQLYENILN---IPFVDIMSLQRSTCNIPYYSLMEQ--------DRYLKKA 334 L L ++ + + R+ + L + D+ L A Sbjct: 834 DLHVTASQDFLL--ALVGDHSLGGKTRAAALRALGTMESAKLADGIKIAVADTDKPLLAA 891 Query: 335 SEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVSMGIESFIKKNRSQIESIDVL 391 + + ++ S D + +E + ++G ++ + +D L Sbjct: 892 ARELAVKV--SPADAVTLNAPVLDDGTLREKQAALATIGSLQVPAADKVLLAELDKL 946 >gi|299115814|emb|CBN74377.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1882 Score = 36.2 bits (82), Expect = 8.6, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 53/198 (26%), Gaps = 34/198 (17%) Query: 165 AVHFFDYVRLTSPGTFLEEIALRNLLEITQNEVGER-------AFGYIR-AYVTQFHHSI 216 A+ D V T EE + + + ++ R R ++ Sbjct: 407 ALVLVDEV-----HTIGEERGATLEVILARMKMVSRSTEVVSMGLPASRMRFIALSATLP 461 Query: 217 YKDHFISVLLRFFLHGQLKLPDEDIVFTIS---------FFSLEEQRAIYLKIAQNSVIS 267 + F S L + + ++ F + +A+ S + Sbjct: 462 NANDFGSFLGAEVFRFGDEFRPVPLQTHVAGYPSGSKPFLFDRGLNNRVAGTVARYS--N 519 Query: 268 GKRKIGFLAIKQ-----LKRIIDRLDYKDLATIQL---YENILNIPFVDIMSLQRSTC-- 317 GK + F K+ + DY Q+ Y D + Sbjct: 520 GKPSLVFCGSKKDTETVASSLAKGTDYARRTGSQVVMQYLATAANTAEDPQLAKLMMRGV 579 Query: 318 NIPYYSLMEQDRYLKKAS 335 I L +DR L + + Sbjct: 580 AIHNSGLSPRDRGLVERA 597 >gi|303247915|ref|ZP_07334182.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio fructosovorans JJ] gi|302490639|gb|EFL50542.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio fructosovorans JJ] Length = 1624 Score = 36.2 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 26/244 (10%), Positives = 58/244 (23%), Gaps = 35/244 (14%) Query: 109 YFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYLHLLIGRAMMPFSSQQAVH- 167 D +V + + K +I + L A +A+ Sbjct: 539 NADGKLVRVALS-----PQLAGKLYLRIGRALVDAQLGDGFFFLTPPAWAKNLPPKAMGA 593 Query: 168 -FFDYVRLTSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLL 226 D ++ +EE A + + A Y+ + S D +L Sbjct: 594 ILADAGKVLWDVGRIEEAATFLEAALADDPDRNEARLYLALARKRQGRS---DDAERLLA 650 Query: 227 RFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDR 286 + + + + GK ++ + Sbjct: 651 EAIAKASPFDREYALGEF-------------------AALDGKENEALAHFRKALTLAPN 691 Query: 287 LDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSL 346 D I + + + R + L + DR + + ++ E+G Sbjct: 692 DDRMRQ------RVISLLVAGNDFTTAREYADWYEARLAKDDRAVFGTAAVVRLEMGDPA 745 Query: 347 IDID 350 Sbjct: 746 GSES 749 >gi|149497639|ref|XP_001517241.1| PREDICTED: similar to SH3 domain and tetratricopeptide repeats 2, partial [Ornithorhynchus anatinus] Length = 1161 Score = 36.2 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 23/82 (28%) Query: 241 IVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQLYEN 300 + + + +QR + L +A+ + G+ + Q + RL + L Sbjct: 835 LADARAREDIGQQRRLCLALARAHLQHGRSSDAIRCLSQAMALAQRLGEAEAFECSLCLG 894 Query: 301 ILNIPFVDIMSLQRSTCNIPYY 322 + + Sbjct: 895 WACVMAGQAGQALDVLGPLVRS 916 >gi|167904905|ref|ZP_02492110.1| hypothetical protein BpseN_21844 [Burkholderia pseudomallei NCTC 13177] Length = 581 Score = 36.2 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 30/79 (37%) Query: 222 ISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLK 281 +LPD + + Q I +++A+ ++I+ +R+I + + Sbjct: 186 RDHERTARPADAERLPDARLSGPLRSRPRMMQHEIEIELARGAIIAARREIACDGARPVL 245 Query: 282 RIIDRLDYKDLATIQLYEN 300 R D + + A ++ Sbjct: 246 RKHDAVRAEFGARGCVFAG 264 >gi|167826463|ref|ZP_02457934.1| hypothetical protein Bpseu9_22510 [Burkholderia pseudomallei 9] Length = 580 Score = 36.2 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 30/79 (37%) Query: 222 ISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLK 281 +LPD + + Q I +++A+ ++I+ +R+I + + Sbjct: 186 RDHERTARPADAERLPDARLSGPLRSRPRMMQHEIEIELARGAIIAARREIACDGARPVL 245 Query: 282 RIIDRLDYKDLATIQLYEN 300 R D + + A ++ Sbjct: 246 RKHDAVRAEFGARGCVFAG 264 >gi|162453139|ref|YP_001615506.1| hypothetical protein sce4863 [Sorangium cellulosum 'So ce 56'] gi|161163721|emb|CAN95026.1| putative membrane protein [Sorangium cellulosum 'So ce 56'] Length = 406 Score = 36.2 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%) Query: 161 SSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYK 218 S A+ +FD +PG L E AL LE+ Q E A Y+ ++ H Y Sbjct: 339 DSADALAWFDTYLREAPGGALREQALGRSLELQQRRDREVARRAALRYLAEYPHGAYA 396 >gi|288576168|ref|ZP_05978311.2| tetratricopeptide repeat protein [Neisseria mucosa ATCC 25996] gi|288566089|gb|EFC87649.1| tetratricopeptide repeat protein [Neisseria mucosa ATCC 25996] Length = 604 Score = 36.2 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 68/216 (31%), Gaps = 14/216 (6%) Query: 123 SGQLEESSKELSKIKDK-DNTRGIVPYLHLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFL 181 +L E + ++ + + L G + +H D R SP + Sbjct: 35 EARLAEQERLIAANDRAWKVFTLLGGEMALQKGD--AGMALGTYMHMLD--RTKSPD--V 88 Query: 182 EEIALRNLLEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDI 241 E AL + + E E I + LR L G+ + Sbjct: 89 AERALEMAVSLNAFEQAE----LIYQKWREIEPVPGAAQKRMTWLRDLLLGKNDKHLSGL 144 Query: 242 VFTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDY-KDLATIQLYEN 300 ++ + E+ R I+L +AQ +V + + A Q+ + + + A + Sbjct: 145 DEVLAGATEEQNRRIFLLLAQTAVQ--QPDLAEKASAQVHKETLKYPEMPEAAIADAIYS 202 Query: 301 ILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASE 336 + + ++ + + L L+ ++ Sbjct: 203 AYDGKKKNAIAALQRLAKLDSEILPPTMLTLRLMAQ 238 >gi|283780101|ref|YP_003370856.1| hypothetical protein Psta_2326 [Pirellula staleyi DSM 6068] gi|283438554|gb|ADB16996.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068] Length = 1581 Score = 36.2 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 16/165 (9%), Positives = 44/165 (26%), Gaps = 11/165 (6%) Query: 218 KDHFISVLLRFFLHGQLKLPDEDIV-FTISFFSLEEQRAIYLKIAQNSVISGKRKIGFLA 276 F + L + + F + + + ++ SG + L Sbjct: 883 ATQFAPLAKLRLAQATLSGNAPLVELAAVQFSGTDSAAEAHQWLGDRALASGWFERARLE 942 Query: 277 IKQLKRIIDRLDYKDLATIQLYENI----------LNIPFVDIMSLQRSTCNIPYYSLME 326 +Q + L + I+L + ++ F DI + + + Sbjct: 943 YEQARARNPALAAELAPRIRLAAAMLGVEAEAPVTADVRFGDISMSASNYETMIREMIAR 1002 Query: 327 QDRYLKKASEIIMSEIGKSLIDIDFEHIQKDLLLDKKEPRHTNVS 371 DR L + + + + + ++ + + Sbjct: 1003 GDRGLTAVAAPVTDVPAPTSYTLKTQARLDGPAGERPNEEQGSRT 1047 >gi|134103621|ref|YP_001109282.1| putative Clp protease ATP-binding subunit [Saccharopolyspora erythraea NRRL 2338] gi|291004842|ref|ZP_06562815.1| putative Clp protease ATP-binding subunit [Saccharopolyspora erythraea NRRL 2338] gi|133916244|emb|CAM06357.1| putative Clp protease ATP-binding subunit [Saccharopolyspora erythraea NRRL 2338] Length = 860 Score = 36.2 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 32/276 (11%), Positives = 71/276 (25%), Gaps = 35/276 (12%) Query: 142 TRGIVPYLHLLIGRAMMPFSSQQAVHFFDYV--RLTS-----PGTFLE-EIALRN----L 189 +V L F +A+ D RL P E E A+R Sbjct: 369 DGALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERAVRRLEIEE 428 Query: 190 LEITQNEVGERAFGYIRAYVTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTI---- 245 + + + E S D L Q + D + + Sbjct: 429 MALAKEEDPASLDRLAA------LRSELADR-REKLSELTARWQGEKESIDKIRVLKTQL 481 Query: 246 ---------SFFSLEEQRAIYLKIAQNSVISGKRKIGFLAIKQLKRIIDRLDYKDLATIQ 296 + + +A L+ + + + A + K ++ D Sbjct: 482 EQLRGESERAERDGDLGKAAELRYGRIPTLEKELDSATAAQSRHKAMLQEEVTPDDV-AD 540 Query: 297 LYENILNIPFVDIMSLQRSTCNIPYYSLMEQDRYLKKASEIIMSEIGKSLIDIDFEHIQK 356 + IP ++ + + L + +A + + ++ + Sbjct: 541 VVSAWTGIPAGRLLEGETTKLLRMEDELSARVVGQAEAVRAVSDAVRRARAGVSDPDRPT 600 Query: 357 DL--LLDKKEPRHTNVSMGIESFIKKNRSQIESIDV 390 L T ++ + F+ + + ID+ Sbjct: 601 GSFMFLGPTGVGKTELAKALAGFLFDDDRAMVRIDM 636 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.309 0.137 0.354 Lambda K H 0.267 0.0416 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,895,218,472 Number of Sequences: 14124377 Number of extensions: 97771695 Number of successful extensions: 692949 Number of sequences better than 10.0: 4601 Number of HSP's better than 10.0 without gapping: 207 Number of HSP's successfully gapped in prelim test: 4394 Number of HSP's that attempted gapping in prelim test: 683914 Number of HSP's gapped (non-prelim): 11330 length of query: 396 length of database: 4,842,793,630 effective HSP length: 141 effective length of query: 255 effective length of database: 2,851,256,473 effective search space: 727070400615 effective search space used: 727070400615 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.7 bits) S2: 82 (36.2 bits)