HHsearch alignment for GI: 254780529 and conserved domain: PRK08126
>PRK08126 hypothetical protein; Provisional.
Probab=100.00 E-value=8.3e-34 Score=244.74 Aligned_cols=126 Identities=23% Similarity=0.324 Sum_probs=115.6
Q ss_pred HCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC-CCCHHHHHH
Q ss_conf 0131145114534999970345674555687546835656544367898612783389873146766787-410699999
Q gi|254780529|r 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSL 289 (343)
Q Consensus 211 ~~~~~~v~~~~~~i~I~i~d~~~~~lF~~gsa~l~~~~~~~l~~ia~~l~~~~~~i~IeGHTD~~p~~g~-~~~Nw~LS~ 289 (343)
T Consensus 300 ~~glv~V~~~~~~~~V~l---~~~~lF~sGsA~l~p~~~pll~rIa~~l~~~~G~I~V~GHTDn~Pi~s~~f~SNw~LS~ 376 (428)
T PRK08126 300 AAGTLSVDEDARHSSVTF---RGDAMFAPGGATVNPAMGPLINKIAREIARVPGKVTVTGHTDNQPIRSAQFASNLVLSE 376 (428)
T ss_pred HCCCEEEEECCCEEEEEE---CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHH
T ss_conf 668648896398479997---68888787761106447999999999983799818998858998887888797499999
Q ss_pred HHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCC--CCCCEEEEEEEC
Q ss_conf 999999999998699965712256303348888988521--337559999956
Q gi|254780529|r 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 (343)
Q Consensus 290 ~RA~aV~~~L~~~Gv~~~ri~~v~G~g~~~P~~~n~t~~--~~NRRVEi~i~~ 340 (343)
T Consensus 377 aRA~~V~~~L~~~~~~~~R~~-a~G~gd~~Pia~N~T~~gRa~NRRVEI~l~q 428 (428)
T PRK08126 377 ERATQVAQMLQSAGVPASRLE-AVGKGDADPVGDNRTPQGRAQNRRVEITVAE 428 (428)
T ss_pred HHHHHHHHHHHHCCCCCCEEE-EEEECCCCCCCCCCCHHHHHHCCCEEEEEEC
T ss_conf 999999999985599976368-8721788999999895567535824789509