HHsearch alignment for GI: 254780529 and conserved domain: PRK09040

Probab=100.00  E-value=4e-42  Score=300.18  Aligned_cols=114  Identities=27%  Similarity=0.417  Sum_probs=99.9

Q ss_pred             EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC----CCEEEEEEECCCCCCC---CCCCHHHHHHHHHHHHHH
Q ss_conf             999703456745556875468356565443678986127----8338987314676678---741069999999999999
Q gi|254780529|r  225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST----EVISIRGHTDASPFRN---IARDNWRLSLDRAYSAYQ  297 (343)
Q Consensus       225 ~I~i~d~~~~~lF~~gsa~l~~~~~~~l~~ia~~l~~~~----~~i~IeGHTD~~p~~g---~~~~Nw~LS~~RA~aV~~  297 (343)
T Consensus        84 ~i~i---~~~vlF~~gsa~L~p~~~~~L~~ia~~L~~~~~~~~~~i~V~GhTD~~pi~~~~~~f~sNw~LS~~RA~~V~~  160 (215)
T PRK09040         84 RIGI---SGSVLFALNSDQLQPEGRELLKSLAGPLAAYLRARDEILMVSGFTDDQPVRAGNRRFADNWELSAQRALTVTR  160 (215)
T ss_pred             EEEC---CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             7960---5643676896400832699999999999987447986599873489976767788889789999999999999


Q ss_pred             HHHHCCCCHHHEEEEEECCCCCCCCCCCCCC--CCCCEEEEEEECCC
Q ss_conf             9998699965712256303348888988521--33755999995699
Q gi|254780529|r  298 VLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ  342 (343)
Q Consensus       298 ~L~~~Gv~~~ri~~v~G~g~~~P~~~n~t~~--~~NRRVEi~i~~~~  342 (343)
T Consensus       161 ~L~~~gv~~~rl~-~~g~G~~~P~~~n~t~~~ra~NRRVeI~~~p~~  206 (215)
T PRK09040        161 ALIDAGVPASSVF-AAAFGSEQPVSSNADEEGRAKNRRVEIAPVPRP  206 (215)
T ss_pred             HHHHCCCCHHHEE-EEEECCCCCCCCCCCHHHHHHCCCEEEEEECCC
T ss_conf             9998699978958-988657687899949889987698789984389