HHsearch alignment for GI: 254780529 and conserved domain: pfam00691
>pfam00691 OmpA OmpA family. The Pfam entry also includes MotB and related proteins which are not included in the Prosite family.
Probab=99.82 E-value=6.9e-20 Score=151.86 Aligned_cols=93 Identities=32% Similarity=0.504 Sum_probs=85.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCC--CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEE
Q ss_conf 55568754683565654436789861278--3389873146766787410699999999999999998699965712256
Q gi|254780529|r 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 (343)
Q Consensus 236 lF~~gsa~l~~~~~~~l~~ia~~l~~~~~--~i~IeGHTD~~p~~g~~~~Nw~LS~~RA~aV~~~L~~~Gv~~~ri~~v~ 313 (343)
T Consensus 1 ~F~~~s~~L~~~~~~~L~~~a~~l~~~~~~~~v~I~GhtD~~---g~~~~N~~LS~~RA~~V~~~L~~~Gv~~~ri~-~~ 76 (97)
T pfam00691 1 LFDPGSAELTAEARETLDRLAEVLKAPELKIAIKIEGHTDSR---GSAKYNWELSARRAQAVANYLVNHGIPPSRIS-VE 76 (97)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC---CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEE-EE
T ss_conf 999981213989999999999999718997289999998999---98889999999999999999998599978989-98
Q ss_pred ECCCCCCCCCCCCCC--CCCC
Q ss_conf 303348888988521--3375
Q gi|254780529|r 314 GFAHHRLKIASDPMN--SANR 332 (343)
Q Consensus 314 G~g~~~P~~~n~t~~--~~NR 332 (343)
T Consensus 77 g~G~~~Pi~~~~~~~~r~~NR 97 (97)
T pfam00691 77 GYGESQPLASNDSDEGRAKNR 97 (97)
T ss_pred EECCCCCCCCCCCHHHHHHCC
T ss_conf 875768889992999997475