HHsearch alignment of GI: 254780529 and MMDB domain: 2hqs_H_

>2hqs_H (H:) Peptidoglycan-associated lipoprotein; TOLB, PAL, TOL, transport protein/lipoprotein complex; 1.50A {Escherichia coli}
Probab=99.91  E-value=6.4e-24  Score=178.35  Aligned_cols=107  Identities=22%  Similarity=0.282  Sum_probs=99.4

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEE
Q ss_conf             567455568754683565654436789861278-3389873146766787410699999999999999998699965712
Q gi|254780529|r  232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS  310 (343)
Q Consensus       232 ~~~~lF~~gsa~l~~~~~~~l~~ia~~l~~~~~-~i~IeGHTD~~p~~g~~~~Nw~LS~~RA~aV~~~L~~~Gv~~~ri~  310 (343)
                      ...++|++||+.|+++++..|++++..|+.+|+ .|.|+||||..   |.+.+||+||.+||.+|+.||...|+++.||.
T Consensus         5 ~~~v~F~~~s~~l~~~~~~~L~~ia~~l~~~p~~~i~I~Ghtd~~---g~~~~n~~LS~~RA~aV~~~l~~~g~~~~ri~   81 (118)
T 2hqs_H            5 NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGERRANAVKMYLQGKGVSADQIS   81 (118)
T ss_dssp             CSEEECCTTCCCCCGGGHHHHHHHHHHHHHCTTCCEEEEECCCSS---SCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC---CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             999994099864598899999999999976999489998423323---21036665889988768999997598434069


Q ss_pred             EEEECCCCCCCCCCCCCC--CCCCEEEEEEECCC
Q ss_conf             256303348888988521--33755999995699
Q gi|254780529|r  311 KISGFAHHRLKIASDPMN--SANRRIDILVEDRQ  342 (343)
Q Consensus       311 ~v~G~g~~~P~~~n~t~~--~~NRRVEi~i~~~~  342 (343)
                       +.|||+++|++++++..  ++||||||.|...+
T Consensus        82 -~~g~G~~~p~~~~~~~~~~~~nRRVei~i~~~~  114 (118)
T 2hqs_H           82 -IVSYGKEKPAVLGHDEAAYSKNRRAVLVYLEHH  114 (118)
T ss_dssp             -EEECTTSSCSSCCSSHHHHHHHSEEEEECC---
T ss_pred             -EEECCCCCCCCCCCCHHHHHHCCCEEEEEEEEE
T ss_conf             -998255377888919789976497999999850