HHsearch alignment of GI: 254780529 and MMDB domain: 2k1s_A_
>2k1s_A (A:) Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli K12}
Probab=99.94 E-value=5.9e-26 Score=191.91 Aligned_cols=125 Identities=26% Similarity=0.329 Sum_probs=113.6
Q ss_pred HCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCCCHHHHHH
Q ss_conf 013114511453499997034567455568754683565654436789861278-3389873146766787410699999
Q gi|254780529|r 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 (343)
Q Consensus 211 ~~~~~~v~~~~~~i~I~i~d~~~~~lF~~gsa~l~~~~~~~l~~ia~~l~~~~~-~i~IeGHTD~~p~~g~~~~Nw~LS~ 289 (343)
....+.+...+.++.|.+ ...++|+.||+.|++.+...|++++..|+.+|+ .|.|+||||+. |.+.+||.||.
T Consensus 15 ~~~~~~v~~~~~~~~i~~---~~~v~F~~~s~~l~~~~~~~L~~ia~~L~~~p~~~i~I~Ghtd~~---g~~~~N~~LS~ 88 (149)
T 2k1s_A 15 RGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDST---GGHDLNMRLSQ 88 (149)
T ss_dssp TTTSCEEEEETTEEEEEE---EHHHHBSSSSSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEECCCT---TCHHHHHHHHH
T ss_pred CCCCCEEEEECCEEEEEC---CCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC---CCCCCCCHHHH
T ss_conf 159977999799999984---786066599733698999999988777731887520102241354---45433201788
Q ss_pred HHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCC--CCCCEEEEEEECCC
Q ss_conf 999999999998699965712256303348888988521--33755999995699
Q gi|254780529|r 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 (343)
Q Consensus 290 ~RA~aV~~~L~~~Gv~~~ri~~v~G~g~~~P~~~n~t~~--~~NRRVEi~i~~~~ 342 (343)
+||.+|+.||...|++++||. +.|||+++|+++|++.. ++||||||+|....
T Consensus 89 ~RA~aV~~~l~~~gv~~~ri~-~~g~G~~~p~~~~~~~~~~~~NRRVei~i~~~~ 142 (149)
T 2k1s_A 89 QRADSVASALITQGVDASRIR-TQGLGPANPIASNSTAEGKAQNRRVEITLSPLL 142 (149)
T ss_dssp HHHHHHHHHHHHHTCCGGGEE-EEECTTTCCSSCSSSHHHHHHHSEEEEEEEECS
T ss_pred HHHHHHHHHHHHCCCCCCCCE-EEEECCCCCCCCCCCHHHHHHCCCEEEEEEECC
T ss_conf 999999999998199766335-899656576689939778974496999996151