BLAST/PSIBLAST alignment of GI: 254780529 and GI: 319898651 at iteration 1
>gi|319898651|ref|YP_004158744.1| flagellar motor protein MotB [Bartonella clarridgeiae 73] Length = 384
>gi|319402615|emb|CBI76160.1| putative flagellar motor protein MotB [Bartonella clarridgeiae 73] Length = 384
 Score =  152 bits (384), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 182/360 (50%), Gaps = 37/360 (10%)

Query: 6   DKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAI 65
           D  Q + + II+++    D   ++ G WKI YADFMT +MA FLV+W++N  DD TK+AI
Sbjct: 4   DDQQSSSEIIIVRRGGHGDHDDHHGGVWKIAYADFMTAMMALFLVLWLVNVQDDATKEAI 63

Query: 66  EQYFNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124
             YFNP    +  T+++GI  + N  E+  ++ +D    +       D +   +N  ++ 
Sbjct: 64  ANYFNPIKLVDPQTSNRGI--QHNDIEQDKKSSLDQECKD-------DAQSEKSNAMEEA 114

Query: 125 QRLENNIFYLSNSQQSE-HCKNSLTRDSEKGKDLCKST-DLEKSINKEENYFLP--PLSK 180
           + + +    L    QSE + +N   +  E+G  + +   D +K++     Y  P  P   
Sbjct: 115 ELMRDPYLGLKKIVQSERNAQNPAEQQFEQGNLVGQGAGDSQKNLQLGTEYHDPFSPYYW 174

Query: 181 EKILAMKRKKRLQD--------------------LAKKISSTLSGLVADNIVKGVLFETT 220
            + +A  +K+++Q                     L K+++  + G   +NI+  V  +  
Sbjct: 175 SENVASSQKRKIQKQKMMAKESEQENNSSENSHALLKELTDLIEGET-NNILAHV--KPI 231

Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280
           + G++I ++DQ    MF    SIP  +TI ++  +  ++A     + I GHTDA P+R+ 
Sbjct: 232 KEGVMIELMDQPKYEMFKVGLSIPTAQTIDLISSMAGIIAKHQGDVVISGHTDARPYRSN 291

Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340
             DNW+LS  RA  AY +L++ G+ E RI ++ G+A   LK   DP  + NRRI I + D
Sbjct: 292 VYDNWQLSTARAQMAYYMLVRGGLDEKRILRVEGYADRDLKNKKDPYAAENRRISIFIRD 351