BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780529|ref|YP_003064942.1| flagellar motor protein MotB [Candidatus Liberibacter asiaticus str. psy62] (343 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|254780529|ref|YP_003064942.1| flagellar motor protein MotB [Candidatus Liberibacter asiaticus str. psy62] gi|254040206|gb|ACT57002.1| flagellar motor protein MotB [Candidatus Liberibacter asiaticus str. psy62] Length = 343 Score = 289 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 343/343 (100%), Positives = 343/343 (100%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD Sbjct: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ Sbjct: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK Sbjct: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS Sbjct: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM Sbjct: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG Sbjct: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 >gi|23500858|ref|NP_700298.1| flagellar motor protein MotB [Brucella suis 1330] gi|163845462|ref|YP_001623117.1| flagellar motor protein MotB [Brucella suis ATCC 23445] gi|225628433|ref|ZP_03786467.1| Protein mbhA [Brucella ceti str. Cudo] gi|254711223|ref|ZP_05173034.1| flagellar motor protein MotB [Brucella pinnipedialis B2/94] gi|254711824|ref|ZP_05173635.1| flagellar motor protein MotB [Brucella ceti M644/93/1] gi|254714893|ref|ZP_05176704.1| flagellar motor protein MotB [Brucella ceti M13/05/1] gi|256015903|ref|YP_003105912.1| flagellar motor protein [Brucella microti CCM 4915] gi|256030148|ref|ZP_05443762.1| flagellar motor protein MotB [Brucella pinnipedialis M292/94/1] gi|256059799|ref|ZP_05449994.1| flagellar motor protein MotB [Brucella neotomae 5K33] gi|256158327|ref|ZP_05456231.1| flagellar motor protein MotB [Brucella ceti M490/95/1] gi|256252739|ref|ZP_05458275.1| flagellar motor protein MotB [Brucella ceti B1/94] gi|260166800|ref|ZP_05753611.1| flagellar motor protein MotB [Brucella sp. F5/99] gi|261216582|ref|ZP_05930863.1| flagellar motor protein MotB [Brucella ceti M13/05/1] gi|261219818|ref|ZP_05934099.1| flagellar motor protein MotB [Brucella ceti B1/94] gi|261318815|ref|ZP_05958012.1| flagellar motor protein MotB [Brucella pinnipedialis B2/94] gi|261319452|ref|ZP_05958649.1| flagellar motor protein MotB [Brucella ceti M644/93/1] gi|261323779|ref|ZP_05962976.1| flagellar motor protein MotB [Brucella neotomae 5K33] gi|261756178|ref|ZP_05999887.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99] gi|265987178|ref|ZP_06099735.1| flagellar motor protein MotB [Brucella pinnipedialis M292/94/1] gi|265996841|ref|ZP_06109398.1| flagellar motor protein MotB [Brucella ceti M490/95/1] gi|23464523|gb|AAN34303.1| chemotaxis motB protein [Brucella suis 1330] gi|163676185|gb|ABY40295.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|225616279|gb|EEH13327.1| Protein mbhA [Brucella ceti str. Cudo] gi|255998563|gb|ACU50250.1| flagellar motor protein [Brucella microti CCM 4915] gi|260918402|gb|EEX85055.1| flagellar motor protein MotB [Brucella ceti B1/94] gi|260921671|gb|EEX88239.1| flagellar motor protein MotB [Brucella ceti M13/05/1] gi|261292142|gb|EEX95638.1| flagellar motor protein MotB [Brucella ceti M644/93/1] gi|261298038|gb|EEY01535.1| flagellar motor protein MotB [Brucella pinnipedialis B2/94] gi|261299759|gb|EEY03256.1| flagellar motor protein MotB [Brucella neotomae 5K33] gi|261736162|gb|EEY24158.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99] gi|262551138|gb|EEZ07299.1| flagellar motor protein MotB [Brucella ceti M490/95/1] gi|264659375|gb|EEZ29636.1| flagellar motor protein MotB [Brucella pinnipedialis M292/94/1] Length = 366 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 94/364 (25%), Positives = 160/364 (43%), Gaps = 29/364 (7%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + II+++ D ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ Sbjct: 4 EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP +S + + + + + D + E TK D + + +++ Q Sbjct: 64 SYFNPVKLMDRHSSPKGVENVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183 L+ + + + G S + F P K Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182 Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218 K+ + ++L + +G A N V Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 G++I + D+ + MF S+ P + +L++I +V+A + I GHTDA PF+ Sbjct: 243 PVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + DNWRLS RA AY +L++ G+ E R+ ++ G+A + K +DP + NRRIDI + Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFI 362 Query: 339 EDRQ 342 + + Sbjct: 363 KSKP 366 >gi|294852974|ref|ZP_06793646.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026] gi|294818629|gb|EFG35629.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026] Length = 366 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 94/364 (25%), Positives = 160/364 (43%), Gaps = 29/364 (7%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + II+++ D ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ Sbjct: 4 EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP +S + + + + + D + E TK D + + +++ Q Sbjct: 64 SYFNPVKLMDRHSSPKGVENVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEKRQL 122 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183 L+ + + + G S + F P K Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182 Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218 K+ + ++L + +G A N V Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 G++I + D+ + MF S+ P + +L++I +V+A + I GHTDA PF+ Sbjct: 243 PVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + DNWRLS RA AY +L++ G+ E R+ ++ G+A + K +DP + NRRIDI + Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFI 362 Query: 339 EDRQ 342 + + Sbjct: 363 KSKP 366 >gi|306841271|ref|ZP_07473982.1| flagellar motor protein MotB [Brucella sp. BO2] gi|306845424|ref|ZP_07477998.1| flagellar motor protein MotB [Brucella sp. BO1] gi|306274167|gb|EFM55983.1| flagellar motor protein MotB [Brucella sp. BO1] gi|306288673|gb|EFM60004.1| flagellar motor protein MotB [Brucella sp. BO2] Length = 366 Score = 225 bits (572), Expect = 8e-57, Method: Composition-based stats. Identities = 94/364 (25%), Positives = 161/364 (44%), Gaps = 29/364 (7%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + II+++ D ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ Sbjct: 4 EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP +S + + + + + D + E+ TK D + + +++ Q Sbjct: 64 SYFNPVKLMDRHSSPKGVENVDQRDGKVRFESDQQV-ENSTKVVNDTTVRPASDQEERQL 122 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183 L+ + + + G S + F P K Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182 Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218 K+ + ++L + +G A N V Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAQNAGKAAKPEPMPDVTVV 242 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 G++I + D+ + MF S+ P + +L++I +V+A + I GHTDA PF+ Sbjct: 243 PVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + DNWRLS RA AY +L++ G+ E R+ ++ G+A + K +DP + NRRIDI + Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPTDPNAAENRRIDIFI 362 Query: 339 EDRQ 342 + + Sbjct: 363 KSKP 366 >gi|306840141|ref|ZP_07472926.1| flagellar motor protein MotB [Brucella sp. NF 2653] gi|306404786|gb|EFM61080.1| flagellar motor protein MotB [Brucella sp. NF 2653] Length = 366 Score = 225 bits (572), Expect = 8e-57, Method: Composition-based stats. Identities = 94/364 (25%), Positives = 161/364 (44%), Gaps = 29/364 (7%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + II+++ D ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ Sbjct: 4 EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP +S + + + + + D + E+ TK D + + +++ Q Sbjct: 64 SYFNPVKLMDRHSSPKGVENVDQRDGKVRFESDQQV-ENSTKVVNDTTVRPASDQEERQL 122 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183 L+ + + + G S + F P K Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182 Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218 K+ + ++L + +G A N V Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAQNAGKAAKPEPMPDVTVV 242 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 G++I + D+ + MF S+ P + +L++I +V+A + I GHTDA PF+ Sbjct: 243 PVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQLGEVIISGHTDARPFK 302 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + DNWRLS RA AY +L++ G+ E R+ ++ G+A + K +DP + NRRIDI + Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPTDPNAAENRRIDIFI 362 Query: 339 EDRQ 342 + + Sbjct: 363 KSKP 366 >gi|254720768|ref|ZP_05182579.1| flagellar motor protein MotB [Brucella sp. 83/13] gi|265985826|ref|ZP_06098561.1| flagellar motor protein MotB [Brucella sp. 83/13] gi|264664418|gb|EEZ34679.1| flagellar motor protein MotB [Brucella sp. 83/13] Length = 366 Score = 225 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 94/364 (25%), Positives = 161/364 (44%), Gaps = 29/364 (7%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + II+++ D ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ Sbjct: 4 EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP +S + + + + + D + E+ TK D + + +++ Q Sbjct: 64 SYFNPVKLMDRHSSPKGVENVDQRDGKVRFESDQQV-ENSTKVVNDTTVRPASDQEERQL 122 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183 L+ + + + G S + F P K Sbjct: 123 FREPYAMLAELAHETGVLQNQSVKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182 Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218 K+ + ++L + +G A N V Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAQNAGKAAKPEPMPDVTVV 242 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 G++I + D+ + MF S+ P + +L++I +V+A + I GHTDA PF+ Sbjct: 243 PVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQLGEVIISGHTDARPFK 302 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + DNWRLS RA AY +L++ G+ E R+ ++ G+A + K +DP + NRRIDI + Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPTDPNAAENRRIDIFI 362 Query: 339 EDRQ 342 + + Sbjct: 363 KSKP 366 >gi|161621187|ref|YP_001595073.1| flagellar motor protein MotB [Brucella canis ATCC 23365] gi|254702390|ref|ZP_05164218.1| flagellar motor protein MotB [Brucella suis bv. 3 str. 686] gi|260568709|ref|ZP_05839178.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40] gi|261752951|ref|ZP_05996660.1| flagellar motor protein MotB [Brucella suis bv. 3 str. 686] gi|161337998|gb|ABX64302.1| Protein mbhA [Brucella canis ATCC 23365] gi|260155374|gb|EEW90455.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40] gi|261742704|gb|EEY30630.1| flagellar motor protein MotB [Brucella suis bv. 3 str. 686] Length = 366 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 94/364 (25%), Positives = 160/364 (43%), Gaps = 29/364 (7%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + II+++ D ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ Sbjct: 4 EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP +S + + + + + D + E TK D + + +++ Q Sbjct: 64 SYFNPVKLMDRHSSPKGVENVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183 L+ + + + G S + F P K Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182 Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218 K+ + ++L + +G A N V Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 G++I + D+ + MF S+ P + +L++I +V+A + I GHTDA PF+ Sbjct: 243 PVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + DNWRLS RA AY +L++ G+ E R+ ++ G+A + K +DP + NRRIDI + Sbjct: 303 SATYDNWRLSSTRAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFI 362 Query: 339 EDRQ 342 + + Sbjct: 363 KSKP 366 >gi|17988498|ref|NP_541131.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. 16M] gi|256042871|ref|ZP_05445817.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. Rev.1] gi|260564108|ref|ZP_05834593.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|265989306|ref|ZP_06101863.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. Rev.1] gi|17984289|gb|AAL53395.1| chemotaxis motb protein [Brucella melitensis bv. 1 str. 16M] gi|260151751|gb|EEW86844.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|262999975|gb|EEZ12665.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. Rev.1] Length = 366 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 93/364 (25%), Positives = 158/364 (43%), Gaps = 29/364 (7%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + II+++ D ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ Sbjct: 4 EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP +S + + + + D + E TK D + + +++ Q Sbjct: 64 SYFNPVKLIDRHSSPKGVQNVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183 L+ + + + G S + F P K Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182 Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218 K+ + ++L + +G A N V Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 G++ + D+ + MF S+ P + +L++I +V+A + I GHTDA PF+ Sbjct: 243 PVEGGVMSQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + DNWRLS RA AY +L++ G+ E R+ ++ G+A + K +DP + NRRIDI + Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFI 362 Query: 339 EDRQ 342 + + Sbjct: 363 KSKP 366 >gi|254695098|ref|ZP_05156926.1| flagellar motor protein MotB [Brucella abortus bv. 3 str. Tulya] gi|261215449|ref|ZP_05929730.1| flagellar motor protein MotB [Brucella abortus bv. 3 str. Tulya] gi|260917056|gb|EEX83917.1| flagellar motor protein MotB [Brucella abortus bv. 3 str. Tulya] Length = 366 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 92/364 (25%), Positives = 157/364 (43%), Gaps = 29/364 (7%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + II+++ D ++ G WKI YADFMT +MAFFLV+W+INA +++TK A+ Sbjct: 4 EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVLWLINAANEETKAAVA 63 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP +S + + + + D + E TK D + + +++ Q Sbjct: 64 SYFNPVKLMDRHSSPKGVQNVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183 L+ + + + G S + F P K Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182 Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218 K+ + ++L + +G A N V Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 G++ + D+ + MF S+ P + +L++I +V+A + I GHTDA PF+ Sbjct: 243 PVEGGVMSQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + DNWRLS RA AY +L++ G+ E R+ ++ G+A K +DP + NRRIDI + Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRHPKNPNDPNAAENRRIDIFI 362 Query: 339 EDRQ 342 + + Sbjct: 363 KSKP 366 >gi|225686890|ref|YP_002734862.1| flagellar motor protein MotB [Brucella melitensis ATCC 23457] gi|256261973|ref|ZP_05464505.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|225642995|gb|ACO02908.1| Protein mbhA [Brucella melitensis ATCC 23457] gi|263091457|gb|EEZ15993.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|326411308|gb|ADZ68372.1| flagellar motor protein MotB [Brucella melitensis M28] gi|326554597|gb|ADZ89236.1| flagellar motor protein MotB [Brucella melitensis M5-90] Length = 366 Score = 222 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 93/364 (25%), Positives = 157/364 (43%), Gaps = 29/364 (7%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + II+++ D ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ Sbjct: 4 EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVV 63 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP +S + + + + D + E TK D + + +++ Q Sbjct: 64 SYFNPVKLMDRHSSPKGVQNVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183 L+ + + + G S + F P K Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182 Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218 K+ + ++L + G A N V Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAAIGEPAPNAGKAAKPEPMPDVTVV 242 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 G++ + D+ + MF S+ P + +L++I +V+A + I GHTDA PF+ Sbjct: 243 PVEGGVMSQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + DNWRLS RA AY +L++ G+ E R+ ++ G+A + K +DP + NRRIDI + Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFI 362 Query: 339 EDRQ 342 + + Sbjct: 363 KSKP 366 >gi|256112172|ref|ZP_05453093.1| flagellar motor protein MotB [Brucella melitensis bv. 3 str. Ether] gi|265993598|ref|ZP_06106155.1| flagellar motor protein MotB [Brucella melitensis bv. 3 str. Ether] gi|262764468|gb|EEZ10500.1| flagellar motor protein MotB [Brucella melitensis bv. 3 str. Ether] Length = 366 Score = 222 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 93/364 (25%), Positives = 159/364 (43%), Gaps = 29/364 (7%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + II+++ D ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ Sbjct: 4 EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVA 63 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP +S + + + + D + E TK D + + +++ Q Sbjct: 64 SYFNPVKLMDRHSSPKGVQNVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183 L+ + + + G S+ + F P K Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSSSGADGGEAYRDPFSPDYWSSKAVGD 182 Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218 K+ + ++L + +G A N V Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 G++ + D+ + MF S+ P + +L++I +V+A + I GHTDA PF+ Sbjct: 243 PVEGGVMSQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + DNWRLS RA AY +L++ G+ E R+ ++ G+A + K +DP + NRRIDI + Sbjct: 303 SATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFI 362 Query: 339 EDRQ 342 + + Sbjct: 363 KSKP 366 >gi|239834431|ref|ZP_04682759.1| Protein mbhA [Ochrobactrum intermedium LMG 3301] gi|239822494|gb|EEQ94063.1| Protein mbhA [Ochrobactrum intermedium LMG 3301] Length = 379 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 95/373 (25%), Positives = 159/373 (42%), Gaps = 42/373 (11%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + + II+++ D ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ Y Sbjct: 6 ETKREIIIVRRGGHDDHDSHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVASY 65 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FNP +S + + + + D I E+ TK D + +++++ Q Sbjct: 66 FNPVKLMDRHSSPKGVQDVEEKDGKVRYESDQKI-ENSTKVINDTTVAPPSEQEERQLFR 124 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI----- 183 LS + + + G + F P K Sbjct: 125 EPYAVLSELAHETGVLQNQSAKGDGGTSKSGPATGADGGEAYRDPFSPDYWSSKAVEDLT 184 Query: 184 --------------------------------LAMKRKKRLQDLAKKIS----STLSGLV 207 A K+++ + DL K + Sbjct: 185 PPDAAPATPPRPEAAQPKPEEAAKPAEAPADTPAEKQEQLIADLKKAAEGETAKEGTAAK 244 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V G++I + D+ + MF S+ P + +L++I +V++ + Sbjct: 245 KAEPMPDVTVVPVDGGVMIQLTDKIDYGMFTIGSAKPDARVVQMLERIAQVISRQPGEVI 304 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 I GHTDA PF++ DNWRLS RA AY +L++ G+ E R+ ++ G+A + K A+DP Sbjct: 305 ISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNANDPN 364 Query: 328 NSANRRIDILVED 340 + NRRIDI ++ Sbjct: 365 AAENRRIDIFLKS 377 >gi|153011513|ref|YP_001372727.1| flagellar motor protein MotB [Ochrobactrum anthropi ATCC 49188] gi|151563401|gb|ABS16898.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188] Length = 371 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 93/365 (25%), Positives = 156/365 (42%), Gaps = 34/365 (9%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + + II+++ D ++ G WKI YADFMT +MAFFLVMW+INA +++TK A+ Y Sbjct: 6 ETKREIIIVRRGGHDDHDSHHGGVWKIAYADFMTAMMAFFLVMWLINAANEETKAAVASY 65 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FNP +S + + + + D I E+ TK D + + +++ Q Sbjct: 66 FNPVKLMDRHSSSKGVQDVEEKDGKVRYESDQKI-ENSTKVINDTTVAPPSDQEERQLFR 124 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE------------------ 170 LS + + + G + Sbjct: 125 EPYAVLSELAHETGVLQNQSAKGDGGTSQSGPATGAEGGEAYRDPFSPDYWSSKAVDDLT 184 Query: 171 -----------ENYFLPPLSKEKILAMKRKKRLQDLAKKIS----STLSGLVADNIVKGV 215 P + A +++ + DL K + + V Sbjct: 185 PPDAAPAAPPKPETAQPKPEETAKPAETQEQLIADLKKAAEGEAAKEGAEAKKAEPMPDV 244 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275 G++I + D+ + MF S+ P + +L++I +V++ + I GHTDA Sbjct: 245 TVVPVDGGVMIQLTDKIDYGMFTIGSAKPDARVVQMLERIAQVISRQPGEVIISGHTDAR 304 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 PF++ DNWRLS RA AY +L++ G+ E R+ ++ G+A + K ASDP + NRRID Sbjct: 305 PFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPKNASDPNAAENRRID 364 Query: 336 ILVED 340 I ++ Sbjct: 365 IFLKS 369 >gi|83593178|ref|YP_426930.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170] gi|83576092|gb|ABC22643.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170] Length = 360 Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 85/332 (25%), Positives = 147/332 (44%), Gaps = 17/332 (5%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 DQ IIIK+ ++ G+WK+ YADF+T +MAFFL++W++N+ ++ I YF P Sbjct: 3 DQPIIIKRIKKGGHA-HHGGAWKLAYADFVTAMMAFFLLLWLLNSVTEEQLVGISNYFAP 61 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + + G + S +T + G + + ++ + Sbjct: 62 TAVSQSPSGAGGVLGGQVLGEGASQSNSSSPAVQLTLPPPTIGAGGQDFSDANEGVDASD 121 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + ++ + GK + TD + + ++EK + K Sbjct: 122 SDDDAGKGEGKGASAGDLEG-LGKLGVEPTDKQLA-----------AAEEKRQQEEFNKT 169 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 +L + I + + +L + T G+ I +ID+ MF SS LP T + Sbjct: 170 ATELRQAIQAV---PSLQALSNSLLIDNTPEGLRIQLIDREGLSMFPTGSSALLPHTRDL 226 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L + + +A ISI GHTDA P+ + NW LS DRA ++ +VL+ +G+ EDR+ Sbjct: 227 LALVAKAVADVPNKISISGHTDAPPYSDPSGYGNWELSADRALASRRVLLANGLKEDRVD 286 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ G A +A DP +NRRI I + + Sbjct: 287 RVVGKAETEPLLADDPKAPSNRRIAITLLRDR 318 >gi|62317962|ref|YP_223815.1| flagellar motor protein MotB [Brucella abortus bv. 1 str. 9-941] gi|83269939|ref|YP_419230.1| flagellar motor protein MotB [Brucella melitensis biovar Abortus 2308] gi|189023213|ref|YP_001932954.1| flagellar motor protein MotB [Brucella abortus S19] gi|237817509|ref|ZP_04596499.1| Protein mbhA [Brucella abortus str. 2308 A] gi|254691605|ref|ZP_05154859.1| flagellar motor protein MotB [Brucella abortus bv. 6 str. 870] gi|254698194|ref|ZP_05160022.1| flagellar motor protein MotB [Brucella abortus bv. 2 str. 86/8/59] gi|254731639|ref|ZP_05190217.1| flagellar motor protein MotB [Brucella abortus bv. 4 str. 292] gi|256256793|ref|ZP_05462329.1| flagellar motor protein MotB [Brucella abortus bv. 9 str. C68] gi|260544147|ref|ZP_05819968.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038] gi|260757237|ref|ZP_05869585.1| flagellar motor protein MotB [Brucella abortus bv. 6 str. 870] gi|260759398|ref|ZP_05871746.1| flagellar motor protein MotB [Brucella abortus bv. 4 str. 292] gi|260762641|ref|ZP_05874973.1| flagellar motor protein MotB [Brucella abortus bv. 2 str. 86/8/59] gi|260883041|ref|ZP_05894655.1| flagellar motor protein MotB [Brucella abortus bv. 9 str. C68] gi|297250146|ref|ZP_06933847.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196] gi|62198155|gb|AAX76454.1| MotB, chemotaxis protein [Brucella abortus bv. 1 str. 9-941] gi|82940213|emb|CAJ13269.1| OmpA/MotB domain [Brucella melitensis biovar Abortus 2308] gi|189021787|gb|ACD74508.1| OmpA/MotB domain protein [Brucella abortus S19] gi|237787264|gb|EEP61482.1| Protein mbhA [Brucella abortus str. 2308 A] gi|260097418|gb|EEW81292.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038] gi|260669716|gb|EEX56656.1| flagellar motor protein MotB [Brucella abortus bv. 4 str. 292] gi|260673062|gb|EEX59883.1| flagellar motor protein MotB [Brucella abortus bv. 2 str. 86/8/59] gi|260677345|gb|EEX64166.1| flagellar motor protein MotB [Brucella abortus bv. 6 str. 870] gi|260872569|gb|EEX79638.1| flagellar motor protein MotB [Brucella abortus bv. 9 str. C68] gi|297174015|gb|EFH33379.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196] Length = 366 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 91/364 (25%), Positives = 156/364 (42%), Gaps = 29/364 (7%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + II+++ D ++ G WKI YADFMT +MAFFLV+W+INA +++TK A+ Sbjct: 4 EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLVLWLINAANEETKAAVA 63 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP +S + + + + D + E TK D + + +++ Q Sbjct: 64 SYFNPVKLMDRHSSPKGVQNVDQRDGKVRFESDQQV-ESSTKVVNDTTVRPASDQEERQL 122 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI--- 183 L+ + + + G S + F P K Sbjct: 123 FREPYAMLAELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGD 182 Query: 184 -----------------LAMKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFE 218 K+ + ++L + +G A N V Sbjct: 183 LTPPAPQTVPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVV 242 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 G++ + D+ + MF S+ P + +L++I +V+A + I GHTDA PF+ Sbjct: 243 PVEGGVMSQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFK 302 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + DN RLS RA AY +L++ G+ E R+ ++ G+A K +DP + NRRIDI + Sbjct: 303 SATYDNRRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRHPKNPNDPNAAENRRIDIFI 362 Query: 339 EDRQ 342 + + Sbjct: 363 KSKP 366 >gi|89068739|ref|ZP_01156125.1| MotB [Oceanicola granulosus HTCC2516] gi|89045702|gb|EAR51764.1| MotB [Oceanicola granulosus HTCC2516] Length = 345 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 86/335 (25%), Positives = 143/335 (42%), Gaps = 5/335 (1%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 Q III++ ++ G WK+ YADFMT +MAFFL+MWII A+D++ + I YF Sbjct: 3 SEKQPIIIRRMTEDAHDGHHGGGWKVAYADFMTAMMAFFLLMWIIAASDEEKLRGIADYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI-TKNSVDLKIGSTNQKKQYQRLE 128 P A G+ D + + ++ + +N +++ T + Sbjct: 63 TPSLVTADGAGSGLLDGEAVEGQGTRGGGVVPELPSFGQENPLEISANRTPEAPSVIVEY 122 Query: 129 NNIFYLSNSQQSE-HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + L + + H D E + E S + LA + Sbjct: 123 VPVEDLGDDPFARLHAAAGEVVDGETTPLDGAGSAPEASEGEAGTAASEAALAAAELAEQ 182 Query: 188 RKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 R L+ L ++ ++ + +L + T G+ I+D MF S+ Sbjct: 183 RAAALEVLRGEVEERIAEDPELATFAENLLVDATDLGLRFQIVDHEGVAMFRSGSAEIEE 242 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGV 304 T ++ +GE + ++I GHTD+ PF NW LS DRA +A + L+ +GV Sbjct: 243 STRELIGVVGETIRGLPYPVAITGHTDSVPFSGARDGYSNWELSADRANAARRTLIAAGV 302 Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 RI +ISG A L++ P NRRI++L++ Sbjct: 303 DAARIVEISGLAATELRVPDIPDAPENRRIEVLMQ 337 >gi|323139665|ref|ZP_08074707.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242] gi|322395097|gb|EFX97656.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242] Length = 351 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 98/345 (28%), Positives = 153/345 (44%), Gaps = 13/345 (3%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 N III+KK D ++ G WK+ +ADFMT +MAFFLVMW+IN+T +TK I QYF Sbjct: 5 HNGSPIIIRKKRGDGDEDHHGGVWKLAFADFMTAMMAFFLVMWLINSTSKETKAVIVQYF 64 Query: 70 NPF-GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 NP + A KG+ D + + S K D ++ + K + Sbjct: 65 NPVQLIDSNPAHKGMRDPKQTGQGKSLQKADDVKTTQEAESKDKDSALHKDPIKTLDEIA 124 Query: 129 NNIFYLSNSQQSEHCK-----------NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + + +E + + + + + KS E + + P Sbjct: 125 KREPPPTTADGAESSPKVGAMTPRDPFDRVAKSASPPQGAAKSAQEENKVESPKKDSHAP 184 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVAD-NIVKGVLFETTRTGILISIIDQRNTPM 236 K K L ++ ++ + + G+LI++ D N M Sbjct: 185 SVTPAEQGEKAKASAAALQAELEKIVNQEARGAHAAPKTEVKQADEGVLITLTDDANFSM 244 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ S P P+ + ++ +IG+VLA T I +RGHTD + + + DNWRLS DRA Sbjct: 245 FEVGSIEPKPQLVRIIGQIGKVLAKKTGEIEVRGHTDGRSYTSKSYDNWRLSSDRATVVN 304 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +L++ G+ R+ KI G A LK DP+ NRRI+IL+ Sbjct: 305 YMLIRGGLPPARVGKIVGMADRHLKTPKDPLAPVNRRIEILLRGD 349 >gi|304392497|ref|ZP_07374437.1| chemotaxis protein MotB [Ahrensia sp. R2A130] gi|303295127|gb|EFL89487.1| chemotaxis protein MotB [Ahrensia sp. R2A130] Length = 364 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 103/363 (28%), Positives = 164/363 (45%), Gaps = 32/363 (8%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 +N+Q III ++ I + ++ G+WKI +ADFMT +MA FLV+W+INA +++TKK++ Sbjct: 2 NTADNEQPIIIVRRNRIAEDGHHGGAWKIAFADFMTAMMALFLVLWLINAANEETKKSVA 61 Query: 67 QYFNPFGKNLMTASKGIFDEQNPP-----ERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 YFNP SK + P E + D+ T G+ K Sbjct: 62 SYFNPVKLVDRNRSKKGIWKSAGPSIETGEETEAGTDTQPEDKDSTSGPASSGAGADGSK 121 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLT-------------------------RDSEKGKD 156 ++ + + + L +E + + E D Sbjct: 122 REAEFIADPFSELEEIASAERENMAAKTAAVGMAGDEESDAIRDPFSPVYWKPEPETPTD 181 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 E+ + E E D+ K++ + ++ V D + Sbjct: 182 EITPIRAEEEKPQPEITSEVSADDEAAREETDDAGASDVLKELKAAVAKAVDDG--PRLD 239 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 T G+LISI D + MF+ SS+P ++ + + +VL+ + I GHTDA P Sbjct: 240 VTPTPDGLLISITDDFDFAMFETGSSVPSGRLVLAMDAVAQVLSERPGKLHIHGHTDARP 299 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 FR RDNW LS RA+SA +L++ G E RI +ISGFA RLK+ +P ++NRRI++ Sbjct: 300 FRGGERDNWTLSSARAHSARYMLLRGGFGEKRIVEISGFADRRLKLVDEPDAASNRRIEL 359 Query: 337 LVE 339 L+E Sbjct: 360 LLE 362 >gi|319409174|emb|CBI82818.1| putative flagellar motor protein MotB [Bartonella schoenbuchensis R1] Length = 396 Score = 214 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 97/365 (26%), Positives = 163/365 (44%), Gaps = 27/365 (7%) Query: 4 HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63 + Q + + II+++ D ++ G+WKI YADF+T +MAFFLVMW++NA D++T++ Sbjct: 2 KSEDEQSHSEIIIVRRGGHDDHDEHHGGAWKIAYADFVTAMMAFFLVMWLVNAKDEETRE 61 Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI------------TKNSV 111 AI YFNP S ++N E + + T+ Sbjct: 62 AIANYFNPIKLTDSQTSSRSIQKKNDVEDDKICPVGQTCGGDSKSENVQLVSLEETELMR 121 Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 D G + Q ++N + + E + DS++ + D +E Sbjct: 122 DPYSGLDKIVQSQQNVQNMQSLPDSDGKHETLMGNSKGDSKENLPVTDYRDPFSPHYWKE 181 Query: 172 NYFLP--------------PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 N ++ + +D AK+++ + + +N + Sbjct: 182 NVASHNNTLNAQGIEWKEGQAQQQLAQEDAPSQESRDFAKELADLIKEITDENHLS-ASV 240 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277 R G++I ++DQ MF SS+P +T+ + +I +V+A + + GHTDA P+ Sbjct: 241 LPIREGVMIELMDQPEYEMFKVGSSVPTAQTVEFIDRIAKVIAKHPGNVVVGGHTDARPY 300 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 R+ RDNW+LS RA Y +L++ G+ E RI ++ G+A LK DP S NRR I Sbjct: 301 RSTTRDNWQLSTSRAQMVYYMLVRGGLDEKRILRVEGYADRNLKNKQDPYASENRRTSIF 360 Query: 338 VEDRQ 342 V D Sbjct: 361 VRDPN 365 >gi|254497974|ref|ZP_05110737.1| flagellar motor protein MotB [Legionella drancourtii LLAP12] gi|254352751|gb|EET11523.1| flagellar motor protein MotB [Legionella drancourtii LLAP12] Length = 293 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 86/345 (24%), Positives = 149/345 (43%), Gaps = 64/345 (18%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + + +E Q IIIKK ++ GSWKI YADF+T +MAFFL+MW+I + + Sbjct: 1 MSENENSAKEKSQPIIIKKVKKHGHA-HHGGSWKIAYADFVTAMMAFFLLMWLIASLNKA 59 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 ++ I +YF K K + ++ I L+I TN Sbjct: 60 QREGIAEYFKQPIKVTFFGGKDV------------------GNQQIRVKGGGLQIEDTNG 101 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + ++ ++ P + Sbjct: 102 QVSTTKMNDSKD-----------------------------------------AKPQDIE 120 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + ++L++L +I+ ++ + + + +L E G+ I +ID + PMFD Sbjct: 121 VIQSSQTQTQKLEELKSEINLSIQNDPSLNGLKDRMLMEVVHDGLRIQLIDNQKNPMFDV 180 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA---RDNWRLSLDRAYSAY 296 S P+ + KI ++L ++I+G+TDA P+ N NW LS RA +A Sbjct: 181 GSEKLNPQFEPIFTKISKLLNGVPNKVTIQGYTDAHPYHNPDELEYTNWELSTQRANAAR 240 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 + L+K+G+ E+++ K+SGF+ DP N+ NRRI I+V Sbjct: 241 RALIKAGLDENKVMKVSGFSSTMPLDKKDPFNAINRRISIIVMKP 285 >gi|114765236|ref|ZP_01444368.1| OmpA/MotB [Pelagibaca bermudensis HTCC2601] gi|114542371|gb|EAU45399.1| OmpA/MotB [Roseovarius sp. HTCC2601] Length = 329 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 80/331 (24%), Positives = 142/331 (42%), Gaps = 18/331 (5%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 N+Q I+IK+ D ++ G+WK+ YADFMT +MAFFL++WI+ A+D++ + + YF Sbjct: 4 NNEQPIVIKRIEEDDGHGHHGGAWKVAYADFMTAMMAFFLLLWILAASDEEKLRGLADYF 63 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 P G+ D + + D G + + Sbjct: 64 TPSLSQSGGRGDGLLDGTVLADDGVMSGTD----------------GPATPVQLPSFGQE 107 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 N + +S+ + N + + +S + + + E ++ Sbjct: 108 NPLAVFDSRLRDTNPNIQVEYDTRPEGRQESATINEGSDPMETARAQVAAERAQQEWDEA 167 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + + + + ++ + F+ T G+ I I+D+ MF S+ T Sbjct: 168 QERLE-QQIMQEVVGSPELESYSDNLRFDRTENGLEIQIVDKSGESMFATGSARIQDRTR 226 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ I + + ++I GHTD+ P+ R NW LS DRA + +VLM +GVS +R Sbjct: 227 DLLRIIADAVVELPNELTISGHTDSVPYTRAATYSNWELSADRANATRRVLMANGVSPER 286 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 I++ISG A P NRRI + V+ Sbjct: 287 ITRISGLADTEPLNPGSPDAPENRRISVTVQ 317 >gi|15964427|ref|NP_384780.1| flagellar motor protein MotB [Sinorhizobium meliloti 1021] gi|307311569|ref|ZP_07591210.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C] gi|15073604|emb|CAC45246.1| Chemotaxis (motility protein B) transmembrane [Sinorhizobium meliloti 1021] gi|306899586|gb|EFN30215.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C] Length = 394 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 111/397 (27%), Positives = 176/397 (44%), Gaps = 57/397 (14%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 MN + N +N+ III ++ A ++ G WKI YADFMT +MAFFLVMW+INA +++ Sbjct: 1 MNDESNHNGKNE--IIIVRRSADSHDGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEE 58 Query: 61 TKKAIEQYFNPFGKNLMTAS--------KGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 TK AI YFNP + K EQ + S T + + Sbjct: 59 TKAAIAAYFNPVQLTDQKPAEKGLKDPAKDAQGEQTQQRSKVDGEQTKSGGSAKTGDQLT 118 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC-------------- 158 G + EN LS + + +++ + G Sbjct: 119 ATSGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGGAAQSGPSTGAAGGEAYRD 178 Query: 159 --------------------------------KSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ +K E + + A Sbjct: 179 PFDPDFWTKQVEVKDAGNTAESDVASAANSAREAASGPGVPDKAEGAKAADAPENQAPAE 238 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 +K + L +I L G +++G+ G+L++I +Q + PMF S++P Sbjct: 239 NPQKEAEALKAEIEKELGGGA-GRLLEGLAVTPAEGGLLVTISEQTDAPMFAVGSAVPQK 297 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 E ++ ++KIG +LA +++RGHTD PF++ DNWRLS RA SAY +L++ G+ E Sbjct: 298 ELVLAMEKIGRLLAERPGAVAVRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLEE 357 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 +R+ +ISGFA RL++ +D ANRRI+IL++ QG Sbjct: 358 ERVKQISGFADRRLQVPNDAYAPANRRIEILLQSGQG 394 >gi|2275156|gb|AAB81408.1| MotB [Sinorhizobium meliloti] Length = 394 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 112/397 (28%), Positives = 178/397 (44%), Gaps = 57/397 (14%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 MN + N +N+ III ++ A ++ G WKI YADFMT +MAFFLVMW+INA +++ Sbjct: 1 MNDESNHNGKNE--IIIVRRSADSHDGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEE 58 Query: 61 TKKAIEQYFNPFGKNLMTAS--------KGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 TK AI YFNP + K EQ + S T + + Sbjct: 59 TKAAIAAYFNPVQLTDQKPAEKGLKDPAKDAQGEQTQQRSKVDGEQTKSGGSAKTGDQLT 118 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC-------------- 158 G + EN LS + + +++ + G Sbjct: 119 ATSGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGGAAQSGPSTGAAGGEAYRD 178 Query: 159 --------------------------------KSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ + +K E + + A Sbjct: 179 PFDPDFWTKQVEVKDAGNTAESEVASAANSAREAASAPEVPDKAEGAKAADAPENQAPAE 238 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 +K + L +I L G A +++G+ G+L++I +Q + PMF S++P Sbjct: 239 NPQKEAEALKAEIEKEL-GGEAGRLLEGLAVTPAEGGLLVTISEQTDAPMFAVGSAVPQK 297 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 E ++ ++KIG +LA +++RGHTD PF++ DNWRLS RA SAY +L++ G+ E Sbjct: 298 ELVLAMEKIGRLLAERPGAVAVRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLEE 357 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 +R+ +ISGFA RL++ +D ANRRI+IL++ QG Sbjct: 358 ERVKQISGFADRRLQVPNDAYAPANRRIEILLQSGQG 394 >gi|307318924|ref|ZP_07598355.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83] gi|306895338|gb|EFN26093.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83] Length = 394 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 111/397 (27%), Positives = 178/397 (44%), Gaps = 57/397 (14%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 MN + N +N+ III ++ A + ++ G WKI YADFMT +MAFFLVMW+INA +++ Sbjct: 1 MNDESNHNGKNE--IIIVRRSADNHDGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEE 58 Query: 61 TKKAIEQYFNPFGKNLMTAS--------KGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 TK AI YFNP + K EQ + S T + + Sbjct: 59 TKAAIAAYFNPVQLTDQKPAEKGLKDPAKDAQGEQTQQRSKVDGEQTKSGGSAKTGDQLT 118 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC-------------- 158 G + EN LS + + +++ + G Sbjct: 119 ATSGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGGAAQSGPSTGAAGGEAYRD 178 Query: 159 --------------------------------KSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ + + E + + A Sbjct: 179 PFDPDFWTKQVEVKDAGNTAERDVASAANSAREAASAPEVPDNAEGAKAADAPENQAPAE 238 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 +K + L +I L G A +++G+ G+L++I +Q + PMF S++P Sbjct: 239 NPQKEAEALKAEIEKEL-GGEAGRLLEGLAVTPAEGGLLVTISEQTDAPMFAVGSAVPQK 297 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 E ++ ++KIG +LA +++RGHTD PF++ DNWRLS RA SAY +L++ G+ E Sbjct: 298 ELVLAMEKIGRLLAERPGAVAVRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLEE 357 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 +R+ +ISGFA RL++ +D ANRRI+IL++ QG Sbjct: 358 ERVKQISGFADRRLQVPNDAYAPANRRIEILLQSGQG 394 >gi|288962674|ref|YP_003452968.1| chemotaxis protein [Azospirillum sp. B510] gi|288914940|dbj|BAI76424.1| chemotaxis protein [Azospirillum sp. B510] Length = 347 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 76/340 (22%), Positives = 147/340 (43%), Gaps = 11/340 (3%) Query: 13 QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72 II+K+ + D + G+WK+ YADF+T +M FFLVMW++N T + +K I YFNP Sbjct: 8 PPIIVKRHLGSHDEEEHNGTWKLAYADFVTAMMTFFLVMWLMNITTTEQRKGIADYFNPV 67 Query: 73 GKNL-MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + + + G+ ++ + S + + D+ S + + +Q ++ + Sbjct: 68 AVSQSNSGADGMLAGRSVDKSGSLTTPNAAGDQASPVASPPVVASVGDSDRQPAGRKDPM 127 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK- 190 + +S G + + + P ++ ++ A+ ++ Sbjct: 128 PHPPGGTVPPVDLLRPASESAPGAPATEPPAPQMAPQMAPQASAPQATRAELEALLERQS 187 Query: 191 -------RLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 L+ L + + ++ + + ++ + G+ + + DQ MF S+ Sbjct: 188 SELGEKVALESLERDLRQRIAASPDLNALQGSLVIQQVPEGLRVQLTDQARFSMFKVGSA 247 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMK 301 + +++ + LA I I GHTD + A+ NW LS DRA +A + L+ Sbjct: 248 QMNDQGRRLMRMVASALAAVPNPIGITGHTDGLGYAADAKYGNWELSSDRANAARRELIA 307 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 SG+ RI ++ G A A P++ +NRRI I + R Sbjct: 308 SGIPNTRIVRVEGRADLDHFGAGGPLDPSNRRISITLLRR 347 >gi|209964663|ref|YP_002297578.1| chemotaxis MotB protein [Rhodospirillum centenum SW] gi|209958129|gb|ACI98765.1| chemotaxis MotB protein [Rhodospirillum centenum SW] Length = 364 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 71/314 (22%), Positives = 143/314 (45%), Gaps = 3/314 (0%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG-KNLMTASKGIFDEQNPP 90 +WK+ YADF+T +MAFFL++W++N T + K+ I YF+P + + G+ Q Sbjct: 28 AWKVAYADFVTAMMAFFLLLWLLNVTTSEQKQGIADYFSPASPSKQESGAGGVLGGQTIT 87 Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 ++ + S+ S Q + + + + + Sbjct: 88 VPGAKINQSSPPQLTVPVPSMPASANSEEQVEDFDSSTKGRPDGTQDKVGQGEAGDSGGP 147 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG-LVAD 209 + D + + +K + + ++ LA +++ Q A+++ + Sbjct: 148 GDSRLDALEKAGEIRQADKNRDGKIDEKELKEALAKLEQEQFQRTAQELRQAIQQVPELR 207 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 + + ++ + T G+ I ++DQ MF S+ LP+T ++ + + + +S+ Sbjct: 208 ELSQNLVIDNTPEGLRIQLVDQEGYSMFPSGSANMLPQTAQLMALVAQAVGKLPNHLSVS 267 Query: 270 GHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 GHTD++PF +R NW LS +RA ++ + L+ +GV E+RI +++G A DP + Sbjct: 268 GHTDSTPFAAGSSRSNWDLSTERANASVRALLAAGVPENRIDQVTGRADRDHLFPDDPRS 327 Query: 329 SANRRIDILVEDRQ 342 NRR+ I++ Q Sbjct: 328 PRNRRVSIVLLREQ 341 >gi|23013133|ref|ZP_00053071.1| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum MS-1] Length = 344 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 132/336 (39%), Gaps = 20/336 (5%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E Q IIIK+ + + G+WK+ YADF+T +MAFFL++W++NA ++ + YF Sbjct: 3 EGGQQIIIKRVKKVA-GGAHGGAWKVAYADFVTAMMAFFLLLWLLNAVTEEQLTGVSNYF 61 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 P + ++ G +Q S + G + + + Sbjct: 62 APTMASKSSSGAGGLLGGKVIGEGAQTSNTSSPSLVQHLPPASIGPGGEDLTGSKEFESD 121 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 N + + + + S ++ A + + Sbjct: 122 NPSESNQGPGQGAGQGAGQGPGQGKDRSGMSEQEF----------------KEAQAQREQ 165 Query: 190 KRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ + + + G +L + T G+ I I DQ MF SS P T Sbjct: 166 QKFDKAKEVLEGAMKGIPEMKQFQGSMLVDNTPEGLRIQITDQEGLAMFPSGSSAPFGHT 225 Query: 249 IVVLQKIGEVLAHST-EVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + V+ I+I GHTDA PFR+ NW LS DRA + + L+ SGV E Sbjct: 226 RAMLDLVSRVVRQLPDNRIAISGHTDAVPFRDPSGYTNWELSADRALATRRALIASGVPE 285 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 RI +I G A +DP NRRI I++ Sbjct: 286 GRIDRIVGRADQEPLDKADPKGLRNRRISIILLREN 321 >gi|148260894|ref|YP_001235021.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5] gi|146402575|gb|ABQ31102.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5] Length = 371 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 88/340 (25%), Positives = 159/340 (46%), Gaps = 14/340 (4%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--FG 73 +I ++ I + ++ G+WK+ YADF+T +MAFFL+MW+INAT + + + YF+ Sbjct: 18 LIIRREEIVEGGHHGGAWKVAYADFVTAMMAFFLLMWLINATTEAQRVGLADYFSQANVL 77 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 + F P ++ + + ++ + N V ++ T Q +Q + Sbjct: 78 NRAASGEGKPFGGSTPFDKGALSSDRGAVRVTVGHNPVSYQVPHTPQGQQIRPDHPTGND 137 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR----- 188 + N+ K + + + +L+K + P ++ Sbjct: 138 MVNTSPGAGHKPRASGATASNAAPKPAPELQKPASPAAGARSAPSGEKAAAGTGGAIGGL 197 Query: 189 ------KKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + R + +I ++ ++ K V T G+ I I+D PMF S Sbjct: 198 APGNLGEARFRTAGSEIRQMMAQDPDLASLSKQVSVHVTPRGLRIQIMDAHKRPMFALGS 257 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + P P T+ +L KI +L+ + I I G+TDA P+ +DNW LS++RA + VL+K Sbjct: 258 ARPNPMTLELLTKIAPILSRLGDRIRIAGYTDARPYVAGPKDNWDLSVERANATRAVLVK 317 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +G + I+++SG+A +L I S+P+ +ANRR+ ILV Sbjct: 318 AGFPKRLIARVSGYADRKLLIPSNPLAAANRRVGILVVRP 357 >gi|296447981|ref|ZP_06889887.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b] gi|296254491|gb|EFH01612.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b] Length = 381 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 100/377 (26%), Positives = 156/377 (41%), Gaps = 43/377 (11%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 ++ + I I+K + ++ G+WKI +ADFMT +MAFFLVMWIIN+T +TK AI Sbjct: 2 SEEKEAEIIFIRKNHGDHEEGHHGGAWKIAFADFMTAMMAFFLVMWIINSTSKETKAAIV 61 Query: 67 QYFNPF-GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 QYFNP + A KG+ D ++ + S+ + EH K + Sbjct: 62 QYFNPVQLVDSNPAHKGLRDPKDGGQGKSEKPTAATQKEHSGAAPESDKDAPQREAALLF 121 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + ++ ++ + + E P + E A Sbjct: 122 DPITTLDEIAGPGNTKEGQTEQAPPIFGDPFDRSGRGVGYVEPHVEESGSPDKASETERA 181 Query: 186 MKRKKRLQDLAKKISSTL------------------------------------------ 203 +R K + T+ Sbjct: 182 EERAKPASSTPPTSAKTMTRQQRQAAATAAADEKAKAEEKAKAEAAQLAATRAAVDRIAK 241 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + V T G+LIS+ D N MF S P P+ + ++ +I VLA Sbjct: 242 AESANAQPGPHVEVTETAEGLLISLTDDANFSMFAIGSVKPKPQLVRIVGQIAGVLAKQP 301 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 + +RGHTDA +++ DNWRLS DRA AY +L++ G++E R+ KI+G+A LK Sbjct: 302 GEVELRGHTDARSYKSKVYDNWRLSADRANMAYYMLLRGGLAEKRVVKIAGYADRNLKAQ 361 Query: 324 SDPMNSANRRIDILVED 340 +P+ + NRRI+ILV Sbjct: 362 KEPLAAVNRRIEILVRK 378 >gi|121602153|ref|YP_989388.1| putative flagellar motor protein MotB [Bartonella bacilliformis KC583] gi|120614330|gb|ABM44931.1| putative flagellar motor protein MotB [Bartonella bacilliformis KC583] Length = 357 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 95/357 (26%), Positives = 164/357 (45%), Gaps = 19/357 (5%) Query: 4 HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63 + + + II+++ D ++ G WKI YADFMT +MA FLVMW++NA D++ K Sbjct: 2 KSEDQHTHSEIIIVRRGGHDDHDDHHGGVWKIAYADFMTAMMALFLVMWLVNAKDEEEKA 61 Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ--- 120 I YFNP + +QN E ++ +D + E + L + + Sbjct: 62 VIANYFNPIKLVDHETTIRGV-KQNDAEDNNTPSVDPTRREEAQSENGQLNLTEEAELMR 120 Query: 121 --------------KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 Q Q +N S Q++ + + + + + + Sbjct: 121 DPYTGLEKIVDAKRTMQDQSDKNAENSTSMEQENGDSRENSKVGIDYYDPFSLNYWKQAA 180 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + P ++ + D AK+++ + V D+ V E + G++I Sbjct: 181 SDALVKAETPLAFQKLAQENFPSQESIDFAKELTEFMKETVNDH-HVSVYVEPIKEGVII 239 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 ++DQ MF SS+P ET+ V+ ++ +++A + I GHTD+ P+R+ RDNW+ Sbjct: 240 ELMDQPQREMFRVGSSLPTAETVEVIGEMAKIIAKHQGDVIISGHTDSRPYRSANRDNWQ 299 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 LS RA AY +L++ G+ E RI ++ G+A LK +DP + NRRI I + + G Sbjct: 300 LSTARAQMAYYMLVRGGLDEKRILRVEGYADRDLKNKADPYAAENRRISIFIRNPNG 356 >gi|326404291|ref|YP_004284373.1| chemotaxis protein MotB [Acidiphilium multivorum AIU301] gi|325051153|dbj|BAJ81491.1| chemotaxis protein MotB [Acidiphilium multivorum AIU301] Length = 371 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 88/340 (25%), Positives = 159/340 (46%), Gaps = 14/340 (4%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--FG 73 +I ++ I + ++ G+WK+ YADF+T +MAFFL+MW+INAT + + + YF+ Sbjct: 18 LIIRREEIVEGGHHGGAWKVAYADFVTAMMAFFLLMWLINATTEAQRVGLADYFSQANVL 77 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 + F P ++ + + ++ + N V ++ T Q +Q + Sbjct: 78 NRAASGEGKPFGGSTPFDKGALSSDRGAVRVTVGHNPVSYEVPHTPQGQQIRPDHPTGND 137 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR----- 188 + N+ K + + + +L+K + P ++ Sbjct: 138 MVNTSPGAGHKPRASGATASNAAPKPAPELQKPASPAAGARSAPSGEKAAAGTGGAIGGL 197 Query: 189 ------KKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + R + +I ++ ++ K V T G+ I I+D PMF S Sbjct: 198 APGNLGEARFRTAGSEIRQMMAQDPDLASLSKQVSVHVTPRGLRIQIMDAHKRPMFALGS 257 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + P P T+ +L KI +L+ + I I G+TDA P+ +DNW LS++RA + VL+K Sbjct: 258 ARPNPMTLELLTKIAPILSRLGDRIRIAGYTDARPYVAGPKDNWDLSVERANATRAVLVK 317 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +G + I+++SG+A +L I S+P+ +ANRR+ ILV Sbjct: 318 AGFPKRLIARVSGYADRKLLIPSNPLAAANRRVGILVVRP 357 >gi|83311678|ref|YP_421942.1| flagellar motor protein [Magnetospirillum magneticum AMB-1] gi|82946519|dbj|BAE51383.1| Flagellar motor protein [Magnetospirillum magneticum AMB-1] Length = 344 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 130/336 (38%), Gaps = 20/336 (5%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E Q IIIK+ + + G+WK+ YADF+T +MAFFL++W++NA ++ + YF Sbjct: 3 EGGQQIIIKRVKKVA-GGAHGGAWKVAYADFVTAMMAFFLLLWLLNAVTEEQLTGVSNYF 61 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 P + ++ G +Q S + G + + Sbjct: 62 APTMASKSSSGAGGLLGGKVIGEGAQVSNTSSPSLVQHLPPASIGPGGEDLTGSKEFAPE 121 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 N S + + S ++ A + + Sbjct: 122 NEGDSSLGPGKGAGQGEGQGAGQGKDRSGMSEQEF----------------KEAQAQREQ 165 Query: 190 KRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ + + + G +L + T G+ I I DQ MF SS P T Sbjct: 166 QKFDKAKEVLEGAMKGIPEMKQFQGSMLVDNTPEGLRIQITDQEGLAMFPSGSSAPYGHT 225 Query: 249 IVVLQKIGEVLAHST-EVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + V+ I+I GHTDA PFR+ NW LS DRA + + L+ SGV E Sbjct: 226 RAMLDLVSRVVRQLPDNRIAISGHTDAIPFRDPSGYTNWELSADRALATRRALIASGVPE 285 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 RI +I G A +DP NRRI I++ Sbjct: 286 GRIDRIVGRADQEPLDKADPKGLRNRRISIILLREN 321 >gi|170727809|ref|YP_001761835.1| flagellar motor protein MotB [Shewanella woodyi ATCC 51908] gi|169813156|gb|ACA87740.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908] Length = 322 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 67/327 (20%), Positives = 121/327 (37%), Gaps = 22/327 (6%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K D P W +AD M++LM FF+++ + D K I Sbjct: 3 KQKCDCPPPGAPLWLATFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM---------- 52 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 K F QN E K I + T ++ + E I Y + Sbjct: 53 -KYAFGVQNKVEVKDIPKGTSVIALEFRPGRPEPTPIETITQQTSEITEPVIEYQAGEDD 111 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 S G+ + + + + ++ +E ++ + + KK+ Sbjct: 112 SSGGSQKQQGQQRGGESSATAQEQSVAQSSSDSESEAKAKEESDAQAAAQENINEQVKKM 171 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L+ + D + E+ I+I I ++ F S P V++++GE+L Sbjct: 172 AQELNTEIVDGA---IEIESLGQQIIIRIREK---GAFSSGSGFLQPRFKPVVRRVGELL 225 Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317 ++++ GHTD N NW LS RA + L+K G R+ + G A+ Sbjct: 226 KDVPGIVTVSGHTDDMNISNELYSSNWDLSSKRAVAVAHELIKVKGFDPQRMK-VVGMAN 284 Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342 +A+D + NRR++I +E + Sbjct: 285 SDPLVANDTSSHRARNRRVEIAIEQGK 311 >gi|167571659|ref|ZP_02364533.1| flagellar motor protein MotB [Burkholderia oklahomensis C6786] Length = 340 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + DQ II+K+ ++ G+WK+ YADFMT +MAFFL+MW+++A K I +Y Sbjct: 3 KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ D SI + ++ ++ G+T + L Sbjct: 62 FNTPLKAAIFGS------------GDRSADDSSIVKGGGRDISSIEAGATRRTDGSTSLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + I S + + SL R + Sbjct: 110 DRIVKKSEDEALAQAQGSLER-------------------------------------RE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QARLHDLQVKLMAAIEANPTLRQFRQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIVVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI I+V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289 >gi|209963560|ref|YP_002296475.1| chemotaxis MotB protein [Rhodospirillum centenum SW] gi|7025363|gb|AAF35851.1|AF220005_2 lateral flagellar motor protein MotB [Rhodospirillum centenum] gi|209957026|gb|ACI97662.1| chemotaxis MotB protein [Rhodospirillum centenum SW] Length = 325 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 77/333 (23%), Positives = 134/333 (40%), Gaps = 26/333 (7%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 Q +I ++ D G+WKI YADF+T +MAFF+++W++N T + + I YFN Sbjct: 7 KPQIVIKRRAQEESDELEGNGTWKIAYADFVTAMMAFFMLLWLVNVTTPEQRHGIADYFN 66 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P + + R + + + + ++ Sbjct: 67 PIAVSDANSGANGQLAGQSVAREGALTSNAASAWETIPTARVPTLSPPGPDRELD----- 121 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 D E G + + L ++ ++ Sbjct: 122 -------------------DGEGGGASAQENAESAPADGNGTPMTAALEQQLQQVAAEEQ 162 Query: 191 RLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + + L V ++ + ++FE T G+ I I D+ + MFD ++ + Sbjct: 163 SFDRIEQSVRDALMSAVDLADLSQNLVFERTADGLRIQITDRPHFSMFDSGATDLNGRAV 222 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + E L+ I+I GHTD PF AR NW LS DRA +A +VL++ G+ R Sbjct: 223 TLLGIVAEALSGVPNRIAISGHTDGRPFAANARYGNWELSADRANAARRVLLQKGIQPGR 282 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++++ G A + DP + NRRI I+V R Sbjct: 283 VARVEGLADTLHLLPEDPGDPRNRRISIIVMRR 315 >gi|114797285|ref|YP_758982.1| putative chemotaxis MotB protein [Hyphomonas neptunium ATCC 15444] gi|114737459|gb|ABI75584.1| putative chemotaxis MotB protein [Hyphomonas neptunium ATCC 15444] Length = 287 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 78/335 (23%), Positives = 134/335 (40%), Gaps = 52/335 (15%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 + IIK+K ++ G+WK+ YADF+T +MAFFL+MW++NAT ++ +K I Sbjct: 4 DSSVQGPTIIKRKKVYKADGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEEQRKGIAD 63 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YFNP + G S + + + + Sbjct: 64 YFNPTIPISRISGGGSDGLNGSSIFSEDTYAKMGTGANRKETVENP-------------- 109 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 K ++ + + Sbjct: 110 ------------------------------------AYGDGKTKDAQDQTEDVDTLAKQA 133 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +K++ D + + +LS + + ++ + + GI++ I D +TP+F S P Sbjct: 134 EEKQIADELQGLKESLSAESRQ-LSEHLMIKMSPEGIVLEITDSESTPLFPLGRSEPSET 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSE 306 + ++ + E A I I GHTD+ +RN A DNW LS DRA +A ++L ++ + Sbjct: 193 MVQLIDVVAESFAEFDNDIKIVGHTDSHRYRNGAIYDNWNLSADRANAARRLLSRADIPS 252 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 DRI ++SG A + DP + NRRI I + Sbjct: 253 DRIREVSGKADTDPLVKDDPQAAQNRRISITILTD 287 >gi|150395498|ref|YP_001325965.1| flagellar motor protein MotB [Sinorhizobium medicae WSM419] gi|150027013|gb|ABR59130.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419] Length = 397 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 106/400 (26%), Positives = 173/400 (43%), Gaps = 60/400 (15%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + III ++ A ++ G WKI YADFMT +MAFFLVMW+INA +++ Sbjct: 1 MSDES--HHNGKNEIIIVRRSAGSHEGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEE 58 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 TK AI YFNP ++ + + + + +D TK+ K G Sbjct: 59 TKAAIAAYFNPVQLTDQKPAEKGLKDPAKDAQGEKTQQRSKVDGDQTKSGGSAKSGDQLT 118 Query: 121 KKQYQRLEN------------------------NIFYLSNSQQSEHCKNSLTRDSEKGKD 156 + + NI + +E ++ E +D Sbjct: 119 ATSGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGGAAESGPSTGAAGGEAYRD 178 Query: 157 LCKS---------------------------------TDLEKSINKEENYFLPPLSKEKI 183 + + + ++ + Sbjct: 179 PFDPDFWTKQVEVKDAGNTVESDVAIAANAAAEEKFVPEETSAKALQNQANAEDRTENEA 238 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 A R++ + L +I L G + V G+L++I +Q + PMF S++ Sbjct: 239 AAEDRQQEAEALKAEIERELGGEAGRLLEGLV-VAPAEGGLLVTISEQTDAPMFAVGSAV 297 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 P E ++ ++KIG +LA +++RGHTD PF++ DNWRLS RA SAY +L++ G Sbjct: 298 PQKELVLAMEKIGRLLAQRPGAVAVRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGG 357 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 + E+R+ +ISGFA RL++ +DP ANRRI+IL++ QG Sbjct: 358 LKEERVKQISGFADRRLQVPNDPYAPANRRIEILLQSGQG 397 >gi|83721243|ref|YP_443678.1| flagellar motor protein MotB [Burkholderia thailandensis E264] gi|167582718|ref|ZP_02375592.1| flagellar motor protein MotB [Burkholderia thailandensis TXDOH] gi|83655068|gb|ABC39131.1| chemotaxis protein MotB [Burkholderia thailandensis E264] Length = 344 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 87/337 (25%), Positives = 145/337 (43%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + DQ II+K+ ++ G+WK+ YADFMT +MAFFL+MW+++A K I +Y Sbjct: 3 KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ D SI + ++ + G+T L Sbjct: 62 FNTPLKAAIFGS------------GDRSADDSSIIKGGGRDISSVDAGTTRLTDGSTHLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + S + SL R + Sbjct: 110 ERVAKKSEDDALAQAQGSLER-------------------------------------RE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QIRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI I+V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289 >gi|312115287|ref|YP_004012883.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] gi|311220416|gb|ADP71784.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 358 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 91/358 (25%), Positives = 155/358 (43%), Gaps = 17/358 (4%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M H KN+ I+++KK+ D N+ G WKI YADFMT +M FFLVMW++N++ + Sbjct: 1 MARH-KKNERAHADIVVRKKLYRSDGDNHGGVWKIAYADFMTAMMTFFLVMWLVNSSSKE 59 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL-------------SIDEHIT 107 I YFNP N P + +E +T Sbjct: 60 RLSQIANYFNPVKLNEHAPPAKDVAATAPKAQDKSPAAGRPNSAVVDPKDRHVFSEEELT 119 Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 +N + Q ++ R+ + S + + ++ ++ Sbjct: 120 RNPFGVLTQLATQAEEALRIASKEQDSSAAAGQLSRDPFVAEPRLVRTAKVSTSSGSQTA 179 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV---ADNIVKGVLFETTRTGI 224 E + + +RK+ LA++I + + V G Sbjct: 180 PGEWSDAPKSHKSANVAETERKEPAASLAEQILKDIESFQSNLPQSFRVQVSVAGVAEGT 239 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 LIS++D MFD S++P P+T++V+ +IG++++ I IRG+TD PF N Sbjct: 240 LISLMDDTKRSMFDVGSAMPKPDTVLVMTRIGDIISKYPGKIIIRGYTDGRPFAGDRYGN 299 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 W LS RA A+ +L + + + R+ I G+A + + A DP+ NRRI++L++D + Sbjct: 300 WVLSSQRARMAFLMLARGKIGDGRVLSIEGYADRQPRNADDPLAPENRRIEVLLKDSE 357 >gi|167620832|ref|ZP_02389463.1| flagellar motor protein MotB [Burkholderia thailandensis Bt4] Length = 348 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 87/337 (25%), Positives = 145/337 (43%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + DQ II+K+ ++ G+WK+ YADFMT +MAFFL+MW+++A K I +Y Sbjct: 3 KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ D SI + ++ + G+T L Sbjct: 62 FNTPLKAAIFGS------------GDRSADDSSIIKGGGRDISSVDAGTTRLTDGSTHLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + S + SL R + Sbjct: 110 ERVAKKSEDDALAQAQGSLER-------------------------------------RE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QIRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI I+V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289 >gi|167564510|ref|ZP_02357426.1| flagellar motor protein MotB [Burkholderia oklahomensis EO147] Length = 340 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + DQ II+K+ ++ G+WK+ YADFMT +MAFFL+MW+++A K I +Y Sbjct: 3 KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ D SI + ++ ++ G+T + L Sbjct: 62 FNTPLKAAIFGS------------GDRSADDSSIVKGGGRDISSIEAGATRRTDGSTSLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + I S + + SL R + Sbjct: 110 DRIVKKSEDEALAQAQGSLER-------------------------------------RE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QVRLHDLQVKLMAAIEANPTLRQFRQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIVVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI I+V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289 >gi|53720918|ref|YP_109904.1| flagellar motor protein MotB [Burkholderia pseudomallei K96243] gi|167817882|ref|ZP_02449562.1| flagellar motor protein MotB [Burkholderia pseudomallei 91] gi|52211332|emb|CAH37321.1| chemotaxis protein MotB [Burkholderia pseudomallei K96243] Length = 340 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + DQ II+K+ ++ G+WK+ YADFMT +MAFFL+MW+++A K I +Y Sbjct: 3 KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ D SI + ++ L G+T + L Sbjct: 62 FNTPLKAAIFGS------------GDRSADDASIIKGGGRDISSLDAGTTRRTDGSTHLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + S + SL R + Sbjct: 110 ERVAKKSEDDALAQAQGSLER-------------------------------------RE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QVRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI I+V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289 >gi|76809964|ref|YP_331496.1| flagellar motor protein MotB [Burkholderia pseudomallei 1710b] gi|126438376|ref|YP_001060851.1| flagellar motor protein MotB [Burkholderia pseudomallei 668] gi|126452767|ref|YP_001068158.1| flagellar motor protein MotB [Burkholderia pseudomallei 1106a] gi|134281430|ref|ZP_01768138.1| chemotaxis protein MotB [Burkholderia pseudomallei 305] gi|167721693|ref|ZP_02404929.1| flagellar motor protein MotB [Burkholderia pseudomallei DM98] gi|167740671|ref|ZP_02413445.1| flagellar motor protein MotB [Burkholderia pseudomallei 14] gi|167826260|ref|ZP_02457731.1| flagellar motor protein MotB [Burkholderia pseudomallei 9] gi|167847768|ref|ZP_02473276.1| flagellar motor protein MotB [Burkholderia pseudomallei B7210] gi|167896356|ref|ZP_02483758.1| flagellar motor protein MotB [Burkholderia pseudomallei 7894] gi|167904730|ref|ZP_02491935.1| flagellar motor protein MotB [Burkholderia pseudomallei NCTC 13177] gi|167913010|ref|ZP_02500101.1| flagellar motor protein MotB [Burkholderia pseudomallei 112] gi|167920947|ref|ZP_02508038.1| flagellar motor protein MotB [Burkholderia pseudomallei BCC215] gi|217423951|ref|ZP_03455451.1| chemotaxis protein MotB [Burkholderia pseudomallei 576] gi|226193238|ref|ZP_03788848.1| chemotaxis protein MotB [Burkholderia pseudomallei Pakistan 9] gi|237814248|ref|YP_002898699.1| flagellar motor protein MotB [Burkholderia pseudomallei MSHR346] gi|242314580|ref|ZP_04813596.1| chemotaxis protein MotB [Burkholderia pseudomallei 1106b] gi|254183890|ref|ZP_04890481.1| chemotaxis protein MotB [Burkholderia pseudomallei 1655] gi|254186366|ref|ZP_04892883.1| chemotaxis protein MotB [Burkholderia pseudomallei Pasteur 52237] gi|254261280|ref|ZP_04952334.1| chemotaxis protein MotB [Burkholderia pseudomallei 1710a] gi|254298791|ref|ZP_04966242.1| chemotaxis protein MotB [Burkholderia pseudomallei 406e] gi|42766714|gb|AAS45440.1| MotB [Burkholderia pseudomallei] gi|76579417|gb|ABA48892.1| MotB [Burkholderia pseudomallei 1710b] gi|126217869|gb|ABN81375.1| chemotaxis protein MotB [Burkholderia pseudomallei 668] gi|126226409|gb|ABN89949.1| chemotaxis protein MotB [Burkholderia pseudomallei 1106a] gi|134247097|gb|EBA47183.1| chemotaxis protein MotB [Burkholderia pseudomallei 305] gi|157808693|gb|EDO85863.1| chemotaxis protein MotB [Burkholderia pseudomallei 406e] gi|157934051|gb|EDO89721.1| chemotaxis protein MotB [Burkholderia pseudomallei Pasteur 52237] gi|184214422|gb|EDU11465.1| chemotaxis protein MotB [Burkholderia pseudomallei 1655] gi|217393014|gb|EEC33036.1| chemotaxis protein MotB [Burkholderia pseudomallei 576] gi|225934838|gb|EEH30815.1| chemotaxis protein MotB [Burkholderia pseudomallei Pakistan 9] gi|237506677|gb|ACQ98995.1| flagellar motor protein MotB [Burkholderia pseudomallei MSHR346] gi|242137819|gb|EES24221.1| chemotaxis protein MotB [Burkholderia pseudomallei 1106b] gi|254219969|gb|EET09353.1| chemotaxis protein MotB [Burkholderia pseudomallei 1710a] Length = 340 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + DQ II+K+ ++ G+WK+ YADFMT +MAFFL+MW+++A K I +Y Sbjct: 3 KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ D SI + ++ L G+T + L Sbjct: 62 FNTPLKAAIFGS------------GDRSADDASIIKGGGRDISSLDAGTTRRTDGSTHLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + S + SL R + Sbjct: 110 ERVAKKSEDDALAQAQGSLER-------------------------------------RE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QVRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI I+V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289 >gi|254194681|ref|ZP_04901112.1| chemotaxis protein MotB [Burkholderia pseudomallei S13] gi|169651431|gb|EDS84124.1| chemotaxis protein MotB [Burkholderia pseudomallei S13] Length = 340 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + DQ II+K+ ++ G+WK+ YADFMT +MAFFL+MW+++A K I +Y Sbjct: 3 KGKDQAIIVKRVN-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ D SI + ++ L G+T + L Sbjct: 62 FNTPLKAAIFGS------------GDRSADDASIIKGGGRDISSLDAGTTRRTDGSAHLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + S + SL R + Sbjct: 110 ERVAKKSEDDALAQAQGSLER-------------------------------------RE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QVRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI I+V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289 >gi|254293721|ref|YP_003059744.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814] gi|254042252|gb|ACT59047.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814] Length = 303 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 87/330 (26%), Positives = 132/330 (40%), Gaps = 40/330 (12%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 +++ I+IKK + ++ G+WK+ YADF+T +MAFFL+MW+IN T D K+ I YF Sbjct: 3 DNRPIVIKKVKKVSGGGHHGGAWKVAYADFVTAMMAFFLLMWLINTTSPDQKRGIADYFA 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P + + + +K + + ST N Sbjct: 63 PASVSKSRQGSDGMLGGTSFQDDGARSGGTNRPMPESKQTASKRRTSTKNAGTPSNETNK 122 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 +S S S+ +I E + AM+ Sbjct: 123 SKEVSQSAMSK------------------------AIAMREQAEFERAEQSLRQAMQDMP 158 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L L+K + + + T G+ I I+DQ MF +S+ PLP Sbjct: 159 DLAALSKHL----------------VIDQTPEGMRIQIVDQEGRAMFAAASAKPLPRAEK 202 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L + +V+ +SI GHT P NW+LS DRA SA +L SG+ DRI Sbjct: 203 ILAAVSQVIMKLPNRVSISGHTGDLPTGVEGYSNWQLSSDRANSARSILESSGLDADRIY 262 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVED 340 ++SG A DP NRRI I++ Sbjct: 263 QVSGKAGSEPLYPDDPDLPGNRRISIVLLR 292 >gi|227820870|ref|YP_002824840.1| flagellar motor protein MotB [Sinorhizobium fredii NGR234] gi|227339869|gb|ACP24087.1| chemotaxis protein motility protein B [Sinorhizobium fredii NGR234] Length = 392 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 106/394 (26%), Positives = 173/394 (43%), Gaps = 53/394 (13%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + III K+ ++ G WKI YADFMT +MAFFLVMW+INA +++ Sbjct: 1 MSEES--HHNGKNEIIIVKRSGDGHDGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEE 58 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG---- 116 TK AI YFNP ++ + + + D TK+ K G Sbjct: 59 TKAAIASYFNPVQLTDQKPAEKGLKNPAKDAQGEETQQRSKSDGEQTKSGGSAKTGDQLT 118 Query: 117 ----STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC-------------- 158 + EN LS + + +++ E G Sbjct: 119 ATSGEETKYSDADFFENPYSVLSEIAKEAGQQANISAKGEGGAAQSGPATGAEGGEAYRD 178 Query: 159 --------KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA-------------- 196 K +++ + N E + A + K + Sbjct: 179 PFDPDFWTKQVEVKDAGNATEGDVADADAGNNPAAGEALKTAEARKGEVPLEQEAEAQQQ 238 Query: 197 ----KKISSTLSGLVADNIVKGVL---FETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + + + V + + + G+L++I +Q + PMF S++P + + Sbjct: 239 QKEAEALKAEIEKAVGGEAGRLLEGLVVTPSEGGLLVTISEQTDAPMFAVGSAVPAKDLV 298 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 + ++KIG +LA ++IRGHTD PF++ DNWRLS RA SAY +L++ G+ E R+ Sbjct: 299 LAMEKIGTLLAERQGAVAIRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLKEQRV 358 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 ++ISGFA RL++ +DP +ANRRI+IL++ QG Sbjct: 359 NQISGFADRRLQVPNDPYAAANRRIEILLQSGQG 392 >gi|157376457|ref|YP_001475057.1| flagellar motor protein MotB [Shewanella sediminis HAW-EB3] gi|157318831|gb|ABV37929.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3] Length = 325 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 70/330 (21%), Positives = 124/330 (37%), Gaps = 24/330 (7%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK D P W +AD M++LM FF+++ + D K I Sbjct: 3 KKEKCDCPPPGAPLWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM--------- 53 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 K F QN E K I + ++ + E + Y + Sbjct: 54 --KYAFGVQNKVEVKDIPKGTSVIALEFRPGRPEPTPIEIINQQTNEMTEPVLEYQAGDD 111 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLE--KSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S + G+ + + KS +K E +E + ++ D Sbjct: 112 DSSGGVQQQRGEQRGGEASATAQEEAESKSESKSEAEAKAKSEEESKAQAAAQDQINDEV 171 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK++ L+ + D + E+ I+I I ++ F S P V++++G Sbjct: 172 KKMAQELNKEIVDGA---IEIESLGQQIIIRIREK---GAFSSGSGFLQPRFKPVIRRVG 225 Query: 257 EVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314 E+L ++++ GHTD N NW LS RA + L++ G + R+ + G Sbjct: 226 ELLKDVPGIVTVSGHTDDMRISNELYSSNWDLSSKRAVAVAHELIRVKGFDQRRMK-VVG 284 Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQ 342 A+ +A+D + NRR++I +E + Sbjct: 285 MANSDPLVANDSPGNRARNRRVEIAIEQGK 314 >gi|254250906|ref|ZP_04944224.1| Flagellar motor protein [Burkholderia dolosa AUO158] gi|124893515|gb|EAY67395.1| Flagellar motor protein [Burkholderia dolosa AUO158] Length = 339 Score = 197 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 81/337 (24%), Positives = 147/337 (43%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +Y Sbjct: 3 KSKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ D SI + ++ + G+ + L Sbjct: 62 FNTPLKAALFGS------------GDRSSQDSSIIDGGGRDLSSVDAGTLRRTDGTTNLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + ++N + L + Sbjct: 110 DRVA-------------------------------------KKNDEDAQAQAQGALERRE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDHVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289 >gi|167587857|ref|ZP_02380245.1| flagellar motor protein MotB [Burkholderia ubonensis Bu] Length = 340 Score = 197 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 83/337 (24%), Positives = 149/337 (44%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +Y Sbjct: 3 KSKDRAIVVKRV-APAKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN + + S ++ D SI ++ + GST + L Sbjct: 62 FNTPLQAALFGS------------GDRSSQDSSIINGGGRDISSVDAGSTRRTDGSTSLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + ++ + + SL R + Sbjct: 110 DRVAKKNDDEAQAQAQGSLER-------------------------------------RE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 253 ESKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289 >gi|170748097|ref|YP_001754357.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170654619|gb|ACB23674.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831] Length = 401 Score = 197 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 96/399 (24%), Positives = 162/399 (40%), Gaps = 65/399 (16%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 N II+ ++ + +D ++ G WKI +ADFMT LMA FLV+W+I AT+D+TK +I YF Sbjct: 3 NNPPEIIVVRRASDEDDGHHGGVWKIAFADFMTTLMALFLVLWLIKATNDETKTSIANYF 62 Query: 70 NPFGKNLM-TASKGIFDEQ------NPPERSSQNKIDLSIDEHITKNSVDLKI------- 115 NP + KG+ D Q N ++ + + + T Sbjct: 63 NPISLSEPLPLRKGVNDPQPASNDPNAGSKAGEPGGTADMRDKGTPLPPGSVPRERELFQ 122 Query: 116 --------------------------------GSTNQKKQYQRLENNIFYLSNSQQSEHC 143 G + + L + L+ ++ Sbjct: 123 DPYSVLAKLAAEVEPGKPQSAAIGDLGAAGRRGGDAARDPFDPLYWEVDVLAPARAERTA 182 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENY-------------------FLPPLSKEKIL 184 + +T + + + + + + PP++ Sbjct: 183 PDGITPPPRQARPDARGAEAAGREGEAKPAGPTPVDARPPADRDGEVRAEGPPVNGPSQA 242 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + + L +I+ V + T G+LI++ D N MF S+ P Sbjct: 243 SGQGVASAAALKAEIAKIFPPPAPGTSGPRVEVQGTPEGLLINVTDDLNFSMFAVGSAEP 302 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 PET+ ++++ + LA I +RGHTD+ PFR+ DNWRLS RA+ A +L ++G+ Sbjct: 303 RPETVRAMERLAKALAARPGRIVVRGHTDSRPFRSEVYDNWRLSTARAHMASYMLTRAGI 362 Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 E RI ++ G A + A+DP NRRI+IL++ G Sbjct: 363 DEARIWRVEGAADRMPRNAADPKAPENRRIEILLQGSPG 401 >gi|283851000|ref|ZP_06368285.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B] gi|283573646|gb|EFC21621.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B] Length = 344 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 132/336 (39%), Gaps = 41/336 (12%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + IIIK+ + + GSWK+ YAD +T +MAFFL+MW++N D K+ + Sbjct: 3 EQDHKAKNIIIKRVKKVA-AGAHGGSWKVAYADLVTAMMAFFLLMWLLNMVPQDKKEQLA 61 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFN F + +G Q Sbjct: 62 SYFNDFSIFQNPGPSAQLLDSGG-------------------------LGPPGAVVGSQD 96 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ + + K T D + G+ L E + + Sbjct: 97 ERPDVAIDRDGKAPSGGKGQGTGDLDGGRQLDAKAAAEAQAAAKAEAAAEAQAVA----- 151 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 L +++ L V + + V + + I I+D+ + P+FD LP Sbjct: 152 --------LEQQVEKALQESVPE-LAGQVSVTQEKDKVRIEIMDKSDRPLFDLGGVALLP 202 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + +L + V+ ++I GHTDA + NW LS RA SA +++++ G+ Sbjct: 203 DAQRILAAVTGVIRKDGIKVAIEGHTDAYRYSGT-YSNWDLSAGRALSARRLMLQQGLPP 261 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 D+++ +SGFA R + P+++ NRRI +L+ Sbjct: 262 DQVAAVSGFADTRPYVPGKPLDARNRRISLLLYREP 297 >gi|167624989|ref|YP_001675283.1| flagellar motor protein MotB [Shewanella halifaxensis HAW-EB4] gi|167355011|gb|ABZ77624.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4] Length = 322 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 65/328 (19%), Positives = 122/328 (37%), Gaps = 23/328 (7%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK D P W +AD M++LM FF+++ + D K I Sbjct: 3 KKAKCDCPPPGAPLWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM--------- 53 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 K F QN E K I + ++ + E + + + Sbjct: 54 --KYAFGVQNKVEVKDIPKGTSVIALEFRPGKPEPTPIEIINQQTNEMTEPMLEFQAGED 111 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 S + G+ + + ++ K E+ K A + ++ + KK Sbjct: 112 DSAGGIQQQRGEQRGGQASATAVEQSEAEAKAESAAQSETESTKTQASA-QDKINEQVKK 170 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 ++ L+ + D + E+ I+I I ++ F S P V++++GE+ Sbjct: 171 MAQELNKEIVDGA---IEIESLGQQIIIRIREK---GSFASGSGFLQPRFKPVVRRVGEL 224 Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFA 316 L ++++ GHTD N NW LS RA + L++ G + R+ + G A Sbjct: 225 LKDVPGIVTVSGHTDDWKISNELYSSNWDLSSKRAVAVAHELIRVKGFDQQRMK-VVGMA 283 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 + ++ + NRR++I +E + Sbjct: 284 SSAPLVENNSSANRARNRRVEIAIEQGK 311 >gi|288958120|ref|YP_003448461.1| chemotaxis protein [Azospirillum sp. B510] gi|288910428|dbj|BAI71917.1| chemotaxis protein [Azospirillum sp. B510] Length = 386 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 79/328 (24%), Positives = 130/328 (39%), Gaps = 19/328 (5%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 +WK+ YADF+T +MAFFL++W++N T D +K I YF+P + + G Sbjct: 28 AWKVAYADFVTAMMAFFLLLWLLNVTTSDQRKGIADYFSPVSVSREQSGSGGMLGGKTIT 87 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 S S S E + + K + D Sbjct: 88 VPGAQVSPSSPMSADVPVSGPPGYSSQQSDDADDPTEATSGPGQGTGPGKPAKAAPDADI 147 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSK-----------------EKILAMKRKKRLQD 194 K + +K + + P K A K ++ Q Sbjct: 148 ADQKPNETRAEFQKRMEEMAKQLGIPGQKPGEKLSDFGERVKEAMNSLQGAAKEARQFQQ 207 Query: 195 LAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 A +I + + + + ++ + T G+ I I+DQ MF S P+T ++Q Sbjct: 208 AATEIRQAIQSVPELEPLAQNLMIDQTPEGLRIQIVDQDRVSMFPAGSGQMYPQTRQLVQ 267 Query: 254 KIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 ++ + L +SI GHTD+SPF RDNW LS +RA + + L+ G++ RI + Sbjct: 268 QVAKALTKLPNKLSISGHTDSSPFPAGSGRDNWDLSTERANATRRALLAGGINPSRIQNV 327 Query: 313 SGFAHHRLKIASDPMNSANRRIDILVED 340 G A +A P + NRRI +++ Sbjct: 328 VGKADTDPLVADQPNSPRNRRITMVLLR 355 >gi|303248925|ref|ZP_07335172.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ] gi|302489648|gb|EFL49584.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ] Length = 355 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 64/334 (19%), Positives = 123/334 (36%), Gaps = 47/334 (14%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 Q IIIK+ + + GSWK+ YAD +T +MAFFL+MW++N + K+ + Sbjct: 2 AEQGQKANIIIKRVKKVA-GGAHGGSWKVAYADLVTAMMAFFLLMWLLNMVPQEKKEQLA 60 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFN F + + + + + + Sbjct: 61 SYFNDFSLFQNPGPSSQLLDSGGLGPPAVVVGSQDERPDVAIDRGGKEPSGGAGQDTGDL 120 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ ++ + Sbjct: 121 DGGKRLEAKRRAEAAAKADAAAKA------------------------------------ 144 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 L ++ L V + + V + + I I+D+ + P+FD LP Sbjct: 145 --------LEGQLEQALQKDVPE-LAGQVSVTQSNDKVRIEIMDKADRPLFDLGGVTLLP 195 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + +L + +V+ ++I GHTDA + NW LS RA +A +++++ G+S Sbjct: 196 DAKRILAAVTDVIKKEGVKVAIEGHTDAYRYSGT-YTNWDLSAGRALAARRMMIQQGLSP 254 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 D+++ ++G+A R + + + NRRI +L+ Sbjct: 255 DQVAAVTGYADTRPYVPGNLYDPKNRRISLLLYR 288 >gi|319898651|ref|YP_004158744.1| flagellar motor protein MotB [Bartonella clarridgeiae 73] gi|319402615|emb|CBI76160.1| putative flagellar motor protein MotB [Bartonella clarridgeiae 73] Length = 384 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 13/352 (3%) Query: 4 HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63 D Q + + II+++ D ++ G WKI YADFMT +MA FLV+W++N DD TK+ Sbjct: 2 KSDDQQSSSEIIIVRRGGHGDHDDHHGGVWKIAYADFMTAMMALFLVLWLVNVQDDATKE 61 Query: 64 AIEQYFNPFGKNLMTAS-------------KGIFDEQNPPERSSQNKIDLSIDEHITKNS 110 AI YFNP S K D++ + S+ + E + Sbjct: 62 AIANYFNPIKLVDPQTSNRGIQHNDIEQDKKSSLDQECKDDAQSEKSNAMEEAELMRDPY 121 Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 + LK +++ E + Q + + D +++ Sbjct: 122 LGLKKIVQSERNAQNPAEQQFEQGNLVGQGAGDSQKNLQLGTEYHDPFSPYYWSENVASS 181 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 + + + + ++ + + + + + G++I ++D Sbjct: 182 QKRKIQKQKMMAKESEQENNSSENSHALLKELTDLIEGETNNILAHVKPIKEGVMIELMD 241 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 Q MF SIP +TI ++ + ++A + I GHTDA P+R+ DNW+LS Sbjct: 242 QPKYEMFKVGLSIPTAQTIDLISSMAGIIAKHQGDVVISGHTDARPYRSNVYDNWQLSTA 301 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 RA AY +L++ G+ E RI ++ G+A LK DP + NRRI I + D + Sbjct: 302 RAQMAYYMLVRGGLDEKRILRVEGYADRDLKNKKDPYAAENRRISIFIRDPK 353 >gi|167838309|ref|ZP_02465168.1| flagellar motor protein MotB [Burkholderia thailandensis MSMB43] Length = 488 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 87/337 (25%), Positives = 147/337 (43%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + DQ II+K+ ++ G+WK+ YADFMT +MAFFL+MW+++A K I Y Sbjct: 3 KGKDQAIIVKRVS-QQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ D SI + ++ ++ G+T L Sbjct: 62 FNTPLKAAIFGS------------GDRSADDSSIVKGGGRDISSVEAGATRLTDGSTHLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + S + SL R + Sbjct: 110 DRVAKKSEDDALAQAQGSLER-------------------------------------RE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS+ P Sbjct: 133 QVRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSNAVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI I+V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRK 289 >gi|144899852|emb|CAM76716.1| Flagellar motor protein [Magnetospirillum gryphiswaldense MSR-1] Length = 323 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 82/334 (24%), Positives = 130/334 (38%), Gaps = 47/334 (14%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 Q IIIK+ + ++ G+WK+ YADF+T +MAFFL++W++NA ++ I YF Sbjct: 3 EGQQIIIKRVKKVA-AGHHGGAWKVAYADFVTAMMAFFLLLWLLNAVTEEQLTGISNYFA 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P + + G + +Q S + G + Sbjct: 62 PSMASKSASGAGGLLGGQVIGQGAQVSQTSSPSLVQHLPPSSIGPGGEDMT--------- 112 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 S N E + + +A + ++ Sbjct: 113 -----------------------------------SENTEPMEGMSEEDFREKMAEREQQ 137 Query: 191 RLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + + + L G ++ + T G+ I I DQ MF SS T Sbjct: 138 KFDKAKEVLDNALKGIPELKQFEGSMMVDNTPEGLRIQITDQEGLAMFPSGSSAMFGHTR 197 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + ++ ISI GHTDA PFR+ NW LS DRA ++ + L+ SGV E+R Sbjct: 198 ALLDLVSRIVNQMPNKISITGHTDAIPFRDPSGYTNWELSADRALASRRALLGSGVPEER 257 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 I +I G A + DP NRRI I++ Sbjct: 258 IDRIVGRASSEPLVVDDPKAPRNRRISIILLREN 291 >gi|238025855|ref|YP_002910086.1| flagellar motor protein MotB [Burkholderia glumae BGR1] gi|124695899|gb|ABN14293.1| MotB [Burkholderia glumae BGR1] gi|124695929|gb|ABN14297.1| MotB [Burkholderia glumae BGR1] gi|237875049|gb|ACR27382.1| MotB [Burkholderia glumae BGR1] Length = 349 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 79/337 (23%), Positives = 141/337 (41%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW+++A K I Y Sbjct: 3 KGKDRAIVVKRV-APAKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + + + + + I S + + S +K L Sbjct: 62 FNTPLKAALFGNGDRSSHDSSIIQGGGSDITRSDAGTTRRTDGTTMLASRLAQKGRDDLH 121 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + Sbjct: 122 D-------------------------------------------------TDPGSQDRAE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + V + + ++T +G+ I I+D + PMF +S++ P Sbjct: 133 QARLHDLQIKLMAAIEANPVLRQFKQQIRIDSTLSGLRIEIVDTQKRPMFATASNMVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNEVPNRIVVQGHTDAVPYAGGEKGYSNWELSADRANASRRELISGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ +++G A + +DP + NRRI ILV + + Sbjct: 253 DAKVLRVTGLASTQNLNKADPFDPENRRISILVLNHK 289 >gi|157962805|ref|YP_001502839.1| flagellar motor protein MotB [Shewanella pealeana ATCC 700345] gi|157847805|gb|ABV88304.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345] Length = 322 Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats. Identities = 67/328 (20%), Positives = 121/328 (36%), Gaps = 23/328 (7%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK D P W +AD M++LM FF+++ + D K I Sbjct: 3 KKAKCDCPPAGAPLWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM--------- 53 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 K F QN E K I + ++ + E + + Sbjct: 54 --KYAFGVQNKVEVKDIPKGTSVIALEFRPGKPEPTPIEIINQQTNEMTEPMLEFQEGED 111 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 S + G+ + + ++ K EN K A + ++ + KK Sbjct: 112 DSAGGIQQQRGEQRGGQASATAVEQSEAEAKAENAAQSDTQSTKTQASA-QDKINEQVKK 170 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 ++ L+ + D + E+ I+I I ++ F S P V++++GE+ Sbjct: 171 MAQELNKEIVDGA---IEIESLGQQIIIRIREK---GAFASGSGFLQPRFKPVVRRVGEL 224 Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFA 316 L ++++ GHTD N NW LS RA + L+K G +R+ + G A Sbjct: 225 LKDVPGIVTVSGHTDDWNISNELYSSNWDLSSKRAVAVGHELIKVKGFEPNRMK-VVGMA 283 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 + ++ + NRR++I +E + Sbjct: 284 SSDPLVENNSSANRARNRRVEIAIEQGK 311 >gi|77361278|ref|YP_340853.1| flagellar motor protein MotB [Pseudoalteromonas haloplanktis TAC125] gi|76876189|emb|CAI87411.1| sodium-driven polar flagellar protein [Pseudoalteromonas haloplanktis TAC125] Length = 306 Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 70/326 (21%), Positives = 123/326 (37%), Gaps = 37/326 (11%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 P L +W +AD M++LM FF+++ + D K I Sbjct: 4 QECKCPPPGLPAWMGTFADLMSLLMCFFVLLLAFSEMDVLKFKQIAGSM----------- 52 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I T + T Q++ + + + + + + S Sbjct: 53 KFAFGVQNKIEVKDIPKGTSVIAMEFTPGKPEPTPIETIQQQTVEMTQQMLEFQAGDESS 112 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + D G+ S + + E+ ++ +++ DL KKI+ Sbjct: 113 AGGRQEQRGDKRGGESRSTSKE---------------QASEQAISAADQQQTNDLVKKIA 157 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + D + E+ I+I I + F S+ P+ ++Q+IG +L Sbjct: 158 QQLEKQIIDGA---IELESLGQQIIIRIREN---GSFPSGSAFLQPKFKPIIQEIGVLLK 211 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 I++ GHTD N +NW LS RA + L K G ++R+ + G A Sbjct: 212 DVPGEITVSGHTDDFQVSNELYINNWDLSSKRAVAVASELQKVVGFDKNRMM-VVGRAET 270 Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342 R + +D NRR++I + + Sbjct: 271 RPLVPNDSNEDRRRNRRVEISILQGK 296 >gi|134294329|ref|YP_001118064.1| flagellar motor protein MotB [Burkholderia vietnamiensis G4] gi|134137486|gb|ABO53229.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4] Length = 338 Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 79/337 (23%), Positives = 145/337 (43%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +Y Sbjct: 3 KSKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSATPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN + + S ++ D SI ++ + G+T + L Sbjct: 62 FNTPLQAALFGS------------GDRSSQDSSIINGGGRDLSSVDAGTTRRTDGSTSLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + + + + Sbjct: 110 DRVAKKGED-------------------------------------TAQAQAQGAIERRE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS+ P Sbjct: 133 QARLHDLQIKLMAAIEANPTLRQFRQQIRIDSTLMGLRIEIVDSQKRPMFAMSSNNVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289 >gi|217976235|ref|YP_002360382.1| OmpA/MotB domain protein [Methylocella silvestris BL2] gi|217501611|gb|ACK49020.1| OmpA/MotB domain protein [Methylocella silvestris BL2] Length = 402 Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 104/397 (26%), Positives = 168/397 (42%), Gaps = 65/397 (16%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ Q I+I K+ + DD + G+WKI +ADFMT +MA FLV+W+I++T D TK ++ QY Sbjct: 3 EKEHQEIVIVKRYSRDDEARHGGAWKIAFADFMTAMMALFLVLWLISSTSDKTKHSVAQY 62 Query: 69 FNPF-----------GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT---------- 107 FNP ++ G + E + + DL+ + + Sbjct: 63 FNPVKLVDMTTLKKGFRDPKKTEMGAGPKTTESEIDADSNKDLAETQEVAEHPGAKVRLI 122 Query: 108 --------------------------KNSVDLKIGSTNQKKQYQRLENNIFYLSN----- 136 +S + + G T + + + F + Sbjct: 123 SESKLFRDPYAALAEIAANAIEAAPHPSSGEPQSGPTEFSVESSDVFVDPFTTAPRLADT 182 Query: 137 -------------SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 ++ + +S + +E + K Sbjct: 183 TVDGPASHAKPAIPERDKQAPSSPKQRAEPLPHAEEQLSPPAGAGKGTKTGDAATEAAMA 242 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 A L +++ + E T G+LIS+ D R MF S+ Sbjct: 243 SAQPMDTETASLKAGLTALAPQKGRFGDGPRIEVENTDEGLLISLTDDRKFSMFAIGSAA 302 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 PLP+TI + KIG++L + ++ +RGHTDA PF++ DNWRLS RA+ A +L + G Sbjct: 303 PLPQTIEAMAKIGDLLKTRSGMVVVRGHTDARPFKSATYDNWRLSTARAHMAQYMLTRGG 362 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + E RI KI GFA HRLK+A++P +ANRRI+IL+ Sbjct: 363 LDEKRIEKIEGFADHRLKVAAEPTAAANRRIEILLRK 399 >gi|58038613|ref|YP_190577.1| chemotaxis MotB protein [Gluconobacter oxydans 621H] gi|58001027|gb|AAW59921.1| Chemotaxis MotB protein [Gluconobacter oxydans 621H] Length = 311 Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 78/337 (23%), Positives = 136/337 (40%), Gaps = 30/337 (8%) Query: 5 GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 ++N + + IIIK+ + + ++ G+WKI YADF+T +MAFFLVMW+INAT +D +K Sbjct: 2 SNQNGKEARKIIIKRF-DVVEGGHHGGAWKIAYADFVTAMMAFFLVMWLINATTEDQRKG 60 Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 I +FNP D+ + + + Sbjct: 61 IANFFNPMAVWK----------------------DMPPPVDNVLPAAPEPVSLETKPVAL 98 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + ++ T S + D + P Sbjct: 99 KPGKDQYGKAPQGAAGSQQGKDQTAPSVHTAQIVVLHDSQI-------QPGEPPVTPSAQ 151 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 +++ R + K + + ++ V G+ + I D + PMF S P Sbjct: 152 KAEQEARAEAAQKIQALISNTPELADVRSQVSVTVGDDGLHVQIADSDHQPMFAMGQSSP 211 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P + +++ I L +SI G+TDA+P+R NW LS RA + ++++SG Sbjct: 212 NPHAVQLIKAIVPYLEKLHGKLSIAGYTDAAPYRPGQLSNWSLSSARAVAVRDLVVQSGF 271 Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 + R+ +SG+A L + P+N NRRI +++ Sbjct: 272 PDRRLKSVSGYADRNLFDPTQPLNPRNRRIVLVLSPD 308 >gi|294139895|ref|YP_003555873.1| sodium-driven polar flagellar protein PomB [Shewanella violacea DSS12] gi|293326364|dbj|BAJ01095.1| sodium-driven polar flagellar protein PomB [Shewanella violacea DSS12] Length = 325 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 69/330 (20%), Positives = 125/330 (37%), Gaps = 24/330 (7%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W +AD M++LM FF+++ + D K I Sbjct: 3 KKAKCECPPPGAPLWLATFADLMSLLMCFFILLLSFSEMDVMKFKQIAGSM--------- 53 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 K F QN E K I + ++ + E + Y + Sbjct: 54 --KYAFGVQNKVEVKDIPKGTSVIALEFRPGRPEPTPIEIINQQTNEMTEPILEYQAGDD 111 Query: 139 QSEHC--KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S + + + + D K+ +K E+ +E ++ + D Sbjct: 112 DSAGGVQQQRGEQRGGEASATAQEQDEAKAESKAESESKAKAEEESKAQAAAQENINDQV 171 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK++ L+ + D + E+ I+I I ++ F S P V++++G Sbjct: 172 KKMAMELNKEIVDGA---IEIESLGQQIIIRIREK---GAFSSGSGFLQPRFKPVVRRVG 225 Query: 257 EVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314 E+L ++++ GHTD N NW LS RA + L+K G ++R+ + G Sbjct: 226 ELLRDIPGIVTVSGHTDDMHISNELYSSNWDLSSKRAVAVAHELIKVKGFEQNRMK-VVG 284 Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQ 342 A+ + +D S NRR++I +E + Sbjct: 285 MANSAPLVDNDSASNRSRNRRVEIAIEQGK 314 >gi|332534966|ref|ZP_08410784.1| flagellar motor rotation protein MotB [Pseudoalteromonas haloplanktis ANT/505] gi|332035584|gb|EGI72076.1| flagellar motor rotation protein MotB [Pseudoalteromonas haloplanktis ANT/505] Length = 306 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 69/326 (21%), Positives = 120/326 (36%), Gaps = 37/326 (11%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 P L +W +AD M++LM FF+++ + D K I Sbjct: 4 QECKCPPPGLPAWMGTFADLMSLLMCFFVLLLAFSEMDVLKFKQIAGSM----------- 52 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I T + T Q++ + + + + + + S Sbjct: 53 KFAFGVQNKIEVKDIPKGTSVIAMEFTPGKPEPTPIETIQQQTVEMTQQMLEFQAGDESS 112 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + D G+ S + S E+ + +++ +L KKI+ Sbjct: 113 AGGRQEQRGDKRGGESRSTSQE---------------QSSEQATSAADQEQTNELVKKIA 157 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + D + E+ I+I I + F S+ P+ ++Q IG +L Sbjct: 158 QQLEKQIIDGA---IELESLGQQIIIRIREN---GSFPSGSAFLQPKFKPIIQDIGVLLK 211 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 I++ GHTD N +NW LS RA + L G ++R+ + G A Sbjct: 212 DVPGEITVSGHTDDFQVSNELYINNWDLSSKRAVAVASELQTVQGFDKNRMM-VVGRADT 270 Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342 R + +D NRR++I + + Sbjct: 271 RPLVPNDSNEDRRRNRRVEISILQGK 296 >gi|330815146|ref|YP_004358851.1| MotB [Burkholderia gladioli BSR3] gi|327367539|gb|AEA58895.1| MotB [Burkholderia gladioli BSR3] Length = 361 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 86/337 (25%), Positives = 146/337 (43%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW+++A K I Y Sbjct: 3 KGKDRAIVVKRV-APAKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + + ++ D SI + G+T + L Sbjct: 62 FNTPLKAALFGN------------GDRSSHDSSIINGGGSDITRSDSGTTRRTDGSTMLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 N + + + + S + Sbjct: 110 NRLTQAGRDDEHDVDRGS-------------------------------------QDRQE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + V + + ++T TG+ I I+D + PMF SS P Sbjct: 133 QVRLHDLQIKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDTQKRPMFALSSDAVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIVMQGHTDAVPYSGGEKGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ +++G A + +DP++ NRRI ILV +R+ Sbjct: 253 EAKVLRVTGLASTQNLNKADPLDPENRRISILVLNRK 289 >gi|119472095|ref|ZP_01614326.1| flagellar motor protein MotB [Alteromonadales bacterium TW-7] gi|119445115|gb|EAW26408.1| flagellar motor protein MotB [Alteromonadales bacterium TW-7] Length = 306 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 69/324 (21%), Positives = 121/324 (37%), Gaps = 37/324 (11%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 P L +W +AD M++LM FF+++ + D K I K Sbjct: 6 CKCPPPGLPAWMGTFADLMSLLMCFFVLLLAFSEMDVLKFKQIAGSM-----------KF 54 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 F QN E K I T + T Q++ + + + + + + S Sbjct: 55 AFGVQNKIEVKDIPKGTSVIAMEFTPGKPEPTPIETIQQQTVEMTQQMLEFQAGDESSAG 114 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + D G+ S + S E+ ++ +++ +L KKI+ Sbjct: 115 GRQEQRGDKRGGESRSTSQE---------------QSSEQAISAADQEQTNELVKKIAQQ 159 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L + D + E+ I+I I + F S+ P+ ++Q IGE+L Sbjct: 160 LERQIIDGA---IELESLGQQIIIRIREN---GSFPSGSAFLQPKFKPIIQDIGELLKDV 213 Query: 263 TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320 I++ GHTD N +NW LS RA + L G + R+ + G A R Sbjct: 214 PGEITVSGHTDDFQVSNELYVNNWDLSSKRAVAVASELQTVQGFDKTRMM-VVGRAETRP 272 Query: 321 KIASDPM--NSANRRIDILVEDRQ 342 + ++ NRR++I + + Sbjct: 273 LVPNETNEDRRRNRRVEISILQGK 296 >gi|78064833|ref|YP_367602.1| flagellar motor protein MotB [Burkholderia sp. 383] gi|77965578|gb|ABB06958.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 338 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 79/337 (23%), Positives = 144/337 (42%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +Y Sbjct: 3 KSKDRAIVVKRV-APSKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQMKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ D SI ++ + G+ + +L Sbjct: 62 FNTPLKAALFGS------------GDRSSQDSSIINGGGRDLSSVDAGTLRRTDGTTQLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + + ++ Sbjct: 110 ERLAKVGDEHSRSQ-------------------------------------EQGAQDRLE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDNVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYSGGEGGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289 >gi|332527142|ref|ZP_08403219.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus JA2] gi|332111570|gb|EGJ11552.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus JA2] Length = 322 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 87/339 (25%), Positives = 145/339 (42%), Gaps = 64/339 (18%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 + + Q IIIK+ + G+WKI YADF+T +MAFFL+MW++ +T + +K I Sbjct: 4 DAKKLQPIIIKRVKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTTEGDRKGIAD 62 Query: 68 YFN-PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YF P L + G D + + + +T+ + +K G + Sbjct: 63 YFTSPLKVALNSGGSGAGDASHVLKGG---------GQDLTRTTGQVKRGDIEAPR---- 109 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + ++ Sbjct: 110 ----------------------------------------------ATVNLQALKQEQVR 123 Query: 187 KRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 RLQDL ++I ++ + + + TR G+ I I+D++N PMF S++ Sbjct: 124 AEIVRLQDLKRRIEEKIAANKRLSAMRSQLRLDMTRDGLRIQIVDEQNRPMFASGSAVVQ 183 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSG 303 P +LQ+IG VLA +++ GHTDA + NW LS DRA ++ +VL + G Sbjct: 184 PYMRELLQEIGSVLAEVPNRLTLEGHTDAMAYAGGERGYSNWELSSDRANASRRVLAEGG 243 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + EDR+ ++ G A + DP+ NRRI I+V +R+ Sbjct: 244 LPEDRMLRVQGLASSQPFDRQDPLAPTNRRISIIVMNRE 282 >gi|221214225|ref|ZP_03587197.1| flagellar motor protein [Burkholderia multivorans CGD1] gi|221165880|gb|EED98354.1| flagellar motor protein [Burkholderia multivorans CGD1] Length = 338 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 78/337 (23%), Positives = 145/337 (43%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + ++ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +Y Sbjct: 3 KGKERAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN + + S ++ D SI ++ + G+ + +L Sbjct: 62 FNTPLRAALFGS------------GDRSSQDSSIINGGGRDLSSVDAGTLRRTDGTTQLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + ++ + L + Sbjct: 110 ERVAKPADD-------------------------------------TAQARMQGALERRE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QVRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDQVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289 >gi|254246760|ref|ZP_04940081.1| Flagellar motor protein [Burkholderia cenocepacia PC184] gi|124871536|gb|EAY63252.1| Flagellar motor protein [Burkholderia cenocepacia PC184] Length = 339 Score = 194 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +Y Sbjct: 3 KSKDRAIVVKRV-APAKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ D SI ++ + G+ + L Sbjct: 62 FNMPLKAAILGS------------GDRSSQDSSIINGGGRDLSSVDAGTLRRTDGTTSLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + + + R Sbjct: 110 ERLAKAGDDNSRSQAQGAQDRL-------------------------------------E 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QTRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289 >gi|319406989|emb|CBI80626.1| putative flagellar motor protein MotB [Bartonella sp. 1-1C] Length = 384 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 85/352 (24%), Positives = 150/352 (42%), Gaps = 13/352 (3%) Query: 4 HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63 + Q + + II+++ D ++ G WKI YADFMT +MA FLV+W++N DD+ K+ Sbjct: 2 KSEDQQSSSEIIIVRRGQHGDHDDHHGGVWKIAYADFMTAMMALFLVLWLVNVQDDEAKE 61 Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 AI YFNP S ++ + + D+ ++ S ++ Sbjct: 62 AIANYFNPIKLVDPQTSNRGIQHKDIEQDKKSSLDQERRDDDQSEKSNPMEEAELMHNPY 121 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + SE + D ++ L + + + + Sbjct: 122 LGLEKIVQSEHHAKNPSEQQFEKGDLLGQGVGDSQENLQLGIEYHDPFSPDYWRENIDSF 181 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-------------FETTRTGILISIID 230 K +K+ + + I S + + K + + + G++I ++D Sbjct: 182 QKRKDQKQKTLVKESIQENNSSENSRVLAKELTDLIEAKNSDILAHVKPIKEGVMIELMD 241 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 Q MF S+P T+ ++ + ++A + I GHTDA P+R+ DNW+LS Sbjct: 242 QPKYEMFKVGLSVPTARTVDLISSMAGIIAKYQGDVVISGHTDARPYRSTVYDNWQLSTA 301 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 RA AY +L++ G E RI ++ G+A LK +P + NRRI I + D + Sbjct: 302 RAQMAYYMLVRGGFDEKRILRVEGYADRDLKNKKNPYAAENRRISIFIRDPK 353 >gi|83955101|ref|ZP_00963757.1| chemotaxis MotB protein [Sulfitobacter sp. NAS-14.1] gi|83840430|gb|EAP79603.1| chemotaxis MotB protein [Sulfitobacter sp. NAS-14.1] Length = 394 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 85/328 (25%), Positives = 142/328 (43%), Gaps = 14/328 (4%) Query: 13 QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72 Q + KK I+ ++ G WK+ YADFMT +MAFFL+MWI+++ D+ + I +YF Sbjct: 6 QPRVFKKVEVIEGGGHHGGGWKVAYADFMTAMMAFFLLMWILSSADEQKLRGIAEYFTNA 65 Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 G+ D + + +I ++ Sbjct: 66 TL---PGGSGVLDGATLGPPGTLTASNGAIVARGSE--------LGKIDDPASAKWEIRD 114 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + S E S E ++ + + + ++ + L ++ K+L Sbjct: 115 ETATSVPDETQIGSEDGAHENPAAANVASASQTASDGSKSAGDATIDNVHALDNEKFKKL 174 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + D + K ++F+ T G+ I IIDQ PMF + T +L Sbjct: 175 E--QDILQAMQENPDLDPLKKNLIFQQTPEGLQIQIIDQEGQPMFYSGRAEMQGATDQLL 232 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 +G+ LA I++ GHTDA F N DNW LS DRA + +V SGV+ DRI + Sbjct: 233 ANLGKSLARLPNKITLSGHTDAVRFANSQKYDNWDLSSDRANATRRVFEASGVARDRIIR 292 Query: 312 ISGFAHHRLKIASDPMNSANRRIDILVE 339 +SG A + +P +++NRRI + V+ Sbjct: 293 VSGLADTAPLVPENPTDASNRRITVSVQ 320 >gi|221202105|ref|ZP_03575140.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] gi|221209087|ref|ZP_03582082.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221171082|gb|EEE03534.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221177899|gb|EEE10311.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] Length = 338 Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 78/337 (23%), Positives = 145/337 (43%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + ++ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +Y Sbjct: 3 KGKERAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN + + S ++ D SI ++ + G+ + +L Sbjct: 62 FNTPLRAALFGS------------GDRSSQDSSIINGGGRDLSSVDAGTLRRTDGTTQLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + ++ + L + Sbjct: 110 ERVAKPTDD-------------------------------------TAQARMQGALERRE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QVRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDQVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289 >gi|115350223|ref|YP_772062.1| flagellar motor protein MotB [Burkholderia ambifaria AMMD] gi|115280211|gb|ABI85728.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 339 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 80/336 (23%), Positives = 142/336 (42%), Gaps = 53/336 (15%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +YF Sbjct: 4 GKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N K + S ++ D SI ++ G+ + L + Sbjct: 63 NTPLKAALFGS------------GDRSSQDSSIINGGGRDLSSADAGTLRRTDGTTSLAD 110 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + + + R + Sbjct: 111 RVAKAGDQNSRAQAQGAQDRL-------------------------------------EQ 133 Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 134 ARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPYM 193 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ E Sbjct: 194 RDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELITGGMDE 253 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 254 SKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289 >gi|172059245|ref|YP_001806897.1| flagellar motor protein MotB [Burkholderia ambifaria MC40-6] gi|171991762|gb|ACB62681.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 339 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 81/336 (24%), Positives = 143/336 (42%), Gaps = 53/336 (15%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +YF Sbjct: 4 GKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N K + S ++ D SI ++ G+ + L + Sbjct: 63 NTPLKAALFGS------------GDRSSQDSSIINGGGRDLSSADAGTLRRTDGTTSLAD 110 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + + + R + Sbjct: 111 RVAKAGDQNSRAQAQGAQDRL-------------------------------------EQ 133 Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 134 ARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDHVEPYM 193 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ E Sbjct: 194 RDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELITGGMDE 253 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A + +DP++S NRRI ++V +R+ Sbjct: 254 AKVLRVLGLASTQNLNKADPLDSENRRISVIVLNRK 289 >gi|161523343|ref|YP_001578355.1| flagellar motor protein MotB [Burkholderia multivorans ATCC 17616] gi|189351884|ref|YP_001947512.1| flagellar motor protein MotB [Burkholderia multivorans ATCC 17616] gi|160340772|gb|ABX13858.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616] gi|189335906|dbj|BAG44976.1| chemotaxis MotB protein [Burkholderia multivorans ATCC 17616] Length = 338 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 78/337 (23%), Positives = 144/337 (42%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + ++ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +Y Sbjct: 3 KGKERAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN + + S ++ D SI ++ G+ + +L Sbjct: 62 FNTPLRAALFGS------------GDRSSQDSSIINGGGRDLSSADAGTLRRTDGTTQLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + ++ + L + Sbjct: 110 ERVAKPADD-------------------------------------TAQARMQGALERRE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QVRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDHVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289 >gi|206558533|ref|YP_002229293.1| flagellar motor protein MotB [Burkholderia cenocepacia J2315] gi|198034570|emb|CAR50435.1| chemotaxis protein MotB [Burkholderia cenocepacia J2315] Length = 339 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +Y Sbjct: 3 KSKDRAIVVKRV-APAKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ D SI ++ + G+ + L Sbjct: 62 FNMPLKAAILGS------------GDRSSQDSSIINGGGRDLSSVDAGTLRRTDGTTSLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + + + R Sbjct: 110 ERLAKAGDENSRSQAQGAQDRL-------------------------------------E 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QTRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDRVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289 >gi|83944198|ref|ZP_00956654.1| chemotaxis MotB protein [Sulfitobacter sp. EE-36] gi|83845065|gb|EAP82946.1| chemotaxis MotB protein [Sulfitobacter sp. EE-36] Length = 394 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 85/328 (25%), Positives = 142/328 (43%), Gaps = 14/328 (4%) Query: 13 QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72 Q + KK I+ ++ G WK+ YADFMT +MAFFL+MWI+++ D+ + I +YF Sbjct: 6 QPRVFKKVEVIEGGGHHGGGWKVAYADFMTAMMAFFLLMWILSSADEQKLRGIAEYFTNA 65 Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 G+ D + + +I ++ Sbjct: 66 TL---PGGSGVLDGATLGPPGTLTASNGAIVARGSE--------LGKIDDPASAKWEIRD 114 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + S E S E ++ + + + ++ + L ++ K+L Sbjct: 115 ETATSVPDETQIGSEDGAHENPAAANVASASQAASDGSKSAGDATIDNVHALDNEKFKKL 174 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + D + K ++F+ T G+ I IIDQ PMF + T +L Sbjct: 175 E--QDILQAMQENPDLDPLKKNLIFQQTPEGLQIQIIDQEGQPMFYSGRAEMQGATDQLL 232 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 +G+ LA I++ GHTDA F N DNW LS DRA + +V SGV+ DRI + Sbjct: 233 ANLGKSLARLPNKITLSGHTDAVRFANSQKYDNWDLSSDRANATRRVFEASGVARDRIIR 292 Query: 312 ISGFAHHRLKIASDPMNSANRRIDILVE 339 +SG A + +P +++NRRI + V+ Sbjct: 293 VSGLADTAPLVPENPTDASNRRITVSVQ 320 >gi|261855636|ref|YP_003262919.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] gi|261836105|gb|ACX95872.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] Length = 358 Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 90/336 (26%), Positives = 141/336 (41%), Gaps = 56/336 (16%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + IIIKK + G+WKI YADF+T +MAFFL+MW++ + + K I Sbjct: 3 EQPDQSKPIIIKKVSKGHGGHH-GGAWKIAYADFVTAMMAFFLLMWLLGSVGEVKLKGIA 61 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFN K + P + + E +T+ ++ GS K Sbjct: 62 DYFNNPVKVTLEGG---------PSAGMSVSLIDAGGEDLTRKEGQVRNGSEPPAKIETD 112 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + K + Sbjct: 113 ---------------------------------------------QKKMTEEEARKKIEE 127 Query: 187 KRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + KKR+++L K++ S ++ + + TR G+ I IIDQ N PMF SSS Sbjct: 128 EDKKRIENLKKELESLINVDPALKAYKDQIKLDMTRDGLRIQIIDQANRPMFKISSSRLE 187 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 P +L+K+ V+ +SI GHTD+ P+ + R NW LS DRA +A + L++ G Sbjct: 188 PYAAEILKKLAPVINKLPNRLSITGHTDSLPYNGVDRTNWELSADRANAARRELVQDGYD 247 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 E ++ ++ G A I SDP + NRRI I+V + Sbjct: 248 ESKLLRVVGMAAALPFIPSDPADPRNRRISIIVMND 283 >gi|257094100|ref|YP_003167741.1| flagellar motor protein MotB [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046624|gb|ACV35812.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 319 Score = 192 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 86/336 (25%), Positives = 146/336 (43%), Gaps = 58/336 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E+ + I+IK+ + ++ G+WKI YADF+T +MAFFL+MW++ +T K I +F Sbjct: 2 EDVRPIVIKRIKKVA-GGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTASGDLKGIADFF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 K T G D + + + +T+ S +K G + K + L+ Sbjct: 61 QNPLKIASTGGSGTGDSSSVLKGG---------GKDLTRRSGQVKSGDIDSKSKTVNLKE 111 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 K + K Sbjct: 112 TNA---------------------------------------------EQARKEFEEREK 126 Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 L +L + I + +L + T G+ I I+D++N PMFD SS+ P T Sbjct: 127 ALLGELKESIEKLIESNPALKQFKSQLLIDITSEGLRIQIVDEQNRPMFDTSSAELKPHT 186 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 V+L++IG+ L +S+ GHTDA+ + NW LS +RA ++ + L+ G+ E Sbjct: 187 RVILREIGKALNAVHNKLSLSGHTDAAQYGGGDKGFSNWELSANRANASRRELIAGGMDE 246 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A L +DP++S NRRI I+V +++ Sbjct: 247 HKVLRVVGLASTVLFDKNDPLSSINRRISIVVLNKR 282 >gi|107024396|ref|YP_622723.1| flagellar motor protein MotB [Burkholderia cenocepacia AU 1054] gi|116688278|ref|YP_833901.1| flagellar motor protein MotB [Burkholderia cenocepacia HI2424] gi|170731591|ref|YP_001763538.1| flagellar motor protein MotB [Burkholderia cenocepacia MC0-3] gi|105894585|gb|ABF77750.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116646367|gb|ABK07008.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424] gi|169814833|gb|ACA89416.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3] Length = 339 Score = 192 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 79/337 (23%), Positives = 143/337 (42%), Gaps = 53/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +Y Sbjct: 3 KSKDRAIVVKRV-APAKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ + SI ++ + G+ + L Sbjct: 62 FNMPLKAAILGS------------GDRSSQESSIINGGGRDLSSVDAGTLRRTDGTTSLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + + + R Sbjct: 110 ERLAKAGDDNSRSQAQGAQDRL-------------------------------------E 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QTRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 253 EAKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289 >gi|170703865|ref|ZP_02894555.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|170131226|gb|EDS99863.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] Length = 339 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 80/336 (23%), Positives = 142/336 (42%), Gaps = 53/336 (15%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +YF Sbjct: 4 GKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N K + S ++ D SI ++ G+ + L + Sbjct: 63 NTPLKAALFGS------------GDRSSQDSSIINGGGRDLSSADAGTLRRTDGTTSLAD 110 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + + + R + Sbjct: 111 RVAKAGDQNSRSQAQGAQDRL-------------------------------------EQ 133 Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 134 ARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPYM 193 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ E Sbjct: 194 RDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELITGGMDE 253 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 254 AKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289 >gi|253998520|ref|YP_003050583.1| flagellar motor protein MotB [Methylovorus sp. SIP3-4] gi|313200598|ref|YP_004039256.1| ompa/motb domain-containing protein [Methylovorus sp. MP688] gi|253985199|gb|ACT50056.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4] gi|312439914|gb|ADQ84020.1| OmpA/MotB domain protein [Methylovorus sp. MP688] Length = 316 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 81/336 (24%), Positives = 144/336 (42%), Gaps = 62/336 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E+ + II+K+ + ++ G+WKI YADF+T +MAFFL+MW++ +T T + I +YF Sbjct: 3 EDTKPIIVKRIKKVA-GGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKATLEGISEYF 61 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 K + P ++ + + + +TK +K + KQ + Sbjct: 62 KMPLKVALQGG---------PSVAASDSVLKGGGKDLTKKQAQVKPVDGPKGKQKEVDIK 112 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + L + Sbjct: 113 D-------------------------------------------------AKTALEKAEQ 123 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++L +L KI + + K +L + T G+ I I+D++N PMF S + P Sbjct: 124 EKLAELKLKIEEAIDASATLSKFKKQLLIDITSEGLRIQIVDEQNRPMFASSKAELQPYA 183 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L +IG +L IS+ GHTDA P+ NW LS DRA ++ + L+ G+ E Sbjct: 184 KQILHEIGSMLNDVPNKISLSGHTDAVPYPTGDKGYSNWELSSDRANASRRELVAGGMDE 243 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G + L +P+N NRRI I++ +++ Sbjct: 244 SKLLRVVGLSSASLFDKENPLNPVNRRISIIIMNKK 279 >gi|325981670|ref|YP_004294072.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212] gi|325531189|gb|ADZ25910.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212] Length = 312 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 79/339 (23%), Positives = 139/339 (41%), Gaps = 64/339 (18%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + I+IK+ + ++ G+WKI YADF+T +MAFFL+MW++ ++ + I Sbjct: 2 ADDLSQRPIVIKRIKKVA-GGHHGGAWKIAYADFVTAMMAFFLLMWLLGSSTQSQLEGIS 60 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 +YF K I + + + +T+ +K G + Sbjct: 61 EYFKTPLKIAFMGGSSIGESNSLIKGG---------GTDLTRQHGQVKNGEIITNDK--- 108 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + I Sbjct: 109 ------------------------------------------------ANKQAIKVIKER 120 Query: 187 KRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 ++L+ L KKI + +L + T G+ I I+D++N PMF + Sbjct: 121 IELEKLEGLKKKIEEAIQANPQLQRFANQLLLDITTDGLRIQIVDEQNRPMFALGRAELQ 180 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSG 303 P T +L++IG++L T IS+ GHTDA PF + NW LS DRA ++ + L+ G Sbjct: 181 PYTRTILREIGKMLNEVTNKISLSGHTDAKPFPSGDKGYSNWELSADRANASRRELIVGG 240 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + +++ ++ G + L DP+N NRRI I+V + + Sbjct: 241 MDANKMLQVVGLSSAVLFDKDDPLNPINRRISIVVMNEK 279 >gi|319403973|emb|CBI77561.1| putative flagellar motor protein MotB [Bartonella rochalimae ATCC BAA-1498] Length = 384 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 86/352 (24%), Positives = 150/352 (42%), Gaps = 13/352 (3%) Query: 4 HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63 + Q + + II+++ D ++ G WKI YADFMT +MA FLV+W++N DD+TK+ Sbjct: 2 KSEDQQSSSEIIIVRRGQHGDHDDHHGGVWKIAYADFMTAMMALFLVLWLVNVQDDETKE 61 Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 AI YFNP S ++ + + D+ ++ S ++ Sbjct: 62 AIANYFNPIKLVDPQTSNRGIQHKDIEQDKKSSLDQERRDDDQSEKSNAMEEAELMHNPY 121 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + SE + D ++ L + + + + Sbjct: 122 PGLEKIVQSEHHAKNPSEQQFEKGDLVGQGVGDSQENLQLGTEHHDPFSPHYWRENIDFS 181 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-------------FETTRTGILISIID 230 K +K+ + + I S + + + + + + G++I ++D Sbjct: 182 QKRKDQKQKTLVKESIQENNSSENSRALAQELTDFIEGENSNILAHVKPIKEGVMIELMD 241 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 Q MF S+P TI ++ + ++A + I GHTDA +R+ DNW+LS Sbjct: 242 QPKYEMFKVGLSVPTARTIDLISSMAGIIAKYQGDVVISGHTDARAYRSAVYDNWQLSTA 301 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 RA AY +L++ G E RI ++ G+A LK DP + NRRI I + D + Sbjct: 302 RAQMAYYMLVRGGFDEKRILRVEGYADRDLKNKKDPYAAENRRISIFIRDPK 353 >gi|171322726|ref|ZP_02911473.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] gi|171091928|gb|EDT37395.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] Length = 339 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 80/336 (23%), Positives = 142/336 (42%), Gaps = 53/336 (15%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +YF Sbjct: 4 GKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSSVTPVQLKGIAEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N K + S ++ D SI ++ G+ + L + Sbjct: 63 NTPLKAALFGS------------GDRSSQDSSIINGGGRDLSSADAGTLRRTDGTTSLAD 110 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + + + R + Sbjct: 111 RVAKAGDQNSRSQAQGAQDRL-------------------------------------EQ 133 Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 134 TRLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDSQKRPMFAMSSDHVEPYM 193 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L++IG+ L I ++GHTDA P+ NW LS DRA ++ + L+ G+ E Sbjct: 194 RDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEGGYSNWELSADRANASRRELISGGMDE 253 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 254 AKVLRVLGLASTQNLNKADPLDPENRRISVIVLNRK 289 >gi|186477722|ref|YP_001859192.1| flagellar motor protein MotB [Burkholderia phymatum STM815] gi|184194181|gb|ACC72146.1| OmpA/MotB domain protein [Burkholderia phymatum STM815] Length = 369 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 80/337 (23%), Positives = 142/337 (42%), Gaps = 54/337 (16%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I Y Sbjct: 3 KDKDRAIVVKR-AAPKKGGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + Sbjct: 62 FNQPLKITLWGG------------------------------------------------ 73 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + S+ S +D + + E + + ++ L L + + Sbjct: 74 DRSAVDSSQIPGGGRDISTDKDGITHQTDGSTNRAEHTAARADDQALQQLQG--AVERRE 131 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + V + + ++T G+ I I+D + PMF + +I P Sbjct: 132 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLQGLRIEIVDTQKRPMFATAQAIVQPY 191 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +LQ IG L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 192 MHDILQAIGNTLNDVPNRIVVQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMD 251 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI I+V +++ Sbjct: 252 EAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNKR 288 >gi|154253326|ref|YP_001414150.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154157276|gb|ABS64493.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1] Length = 298 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 77/332 (23%), Positives = 132/332 (39%), Gaps = 51/332 (15%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 N Q II+KK + ++ G+WKI YADF+T +MAFFL+MW+I+ T + K+ + YF Sbjct: 5 NQQPIILKKVKKVVH-GHHGGAWKIAYADFVTAMMAFFLLMWLISMTTPEQKQGLADYFA 63 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P + T+ G Sbjct: 64 PSNVSRSTSGAGGIMGGTAF---------------------------------------- 83 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 E + T+ + +E+ K + + ++ Sbjct: 84 --------DEEGARMPGTKPQVVMTISTPAQPKSPETAEEKAAAAQVDKLLKEKSARDER 135 Query: 191 RLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + A+ I + + + V+ + T G+ I I+DQ MF ++ P T Sbjct: 136 NFRSAAESIRQAMRENPDLAELSRNVIIDETPEGLRIQIVDQDGRSMFPSGNAEPYERTR 195 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +++++ +L +SI GHTDA+P NW L+ DRA + ++L +G+S DR Sbjct: 196 QLIEEVSNILIKLPNRVSISGHTDANPVEGRPGYSNWELTADRANATRRILAGAGLSNDR 255 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 I ++ G A DP +ANRR+ I++ Sbjct: 256 IYQVIGKADSEPLFPEDPYMAANRRLSIVLLR 287 >gi|84502387|ref|ZP_01000523.1| chemotaxis MotB protein [Oceanicola batsensis HTCC2597] gi|84389199|gb|EAQ01996.1| chemotaxis MotB protein [Oceanicola batsensis HTCC2597] Length = 339 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 78/308 (25%), Positives = 136/308 (44%), Gaps = 11/308 (3%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 WK+ YADFMT +MAFFL++WI+ A+D++ + + YF P +G+ D Sbjct: 26 WKVAYADFMTAMMAFFLLLWILAASDEEALRGLADYFTPSLSQAGGKGQGMLDGTIIAPN 85 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 Q + + ++ + ++ + + E Sbjct: 86 GDQGGSNTPDGNTRLPSFG---------QENPLAVFDSRLRDEATDVIVEYETKEDGTME 136 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNI 211 + + S ++ + + +R+ ++ L ++I + V +++ Sbjct: 137 PKSMGEGEDEEDGSAAEQAAERQALEEQYQAEVKEREANMERLEEEIRRHIQERVDLEDL 196 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 + + F+ T G+L+ I+D+ MF + S+ T +++ IGE + I I GH Sbjct: 197 GENLRFDRTSEGLLVQIMDKEGRSMFARGSARVDSRTRDLIRIIGESIVDMQNAIVITGH 256 Query: 272 TDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 TDA PF N NW LS DRA + +VL+ +GVS RI +ISG A A DP + Sbjct: 257 TDAVPFVNNLGYSNWELSADRANATRRVLIDTGVSPARIKRISGLASTDPLNADDPEAAE 316 Query: 331 NRRIDILV 338 NRRI +L+ Sbjct: 317 NRRIGVLL 324 >gi|329890064|ref|ZP_08268407.1| chemotaxis protein motB [Brevundimonas diminuta ATCC 11568] gi|328845365|gb|EGF94929.1| chemotaxis protein motB [Brevundimonas diminuta ATCC 11568] Length = 300 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 84/332 (25%), Positives = 133/332 (40%), Gaps = 48/332 (14%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 ND+ I+IKK + ++ G+WK+ YADF+T +MAFFL+MW+IN TD + K+ I +YF Sbjct: 4 NDRPILIKKVKKVAGHGHHGGAWKVAYADFVTAMMAFFLLMWLINTTDPEQKRGIAEYFA 63 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P + T+ G S K S Sbjct: 64 PANVSASTSGSGGILGGTSLGDSEGAKGAGS----------------------------- 94 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + E L I + E ++ AM+ Sbjct: 95 -NAVIEQLAPEAPDAPQEAGQNSNLASASEAALRAEIARREAADFASAAESLRQAMQSMP 153 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L +L+K++ + + T G+ I ++DQ MF+ SS P P + Sbjct: 154 ELAELSKQL----------------IIDQTPEGLRIQLVDQEGRSMFENGSSRPNPRAQL 197 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARD--NWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ + +V+ I+I GHT A + A +W LS RA ++ L +GVS DR Sbjct: 198 LLRAVAKVINQLPNRITITGHTSAVAGSSRASSPGDWPLSSARADASRLTLQSAGVSSDR 257 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + ++G A DP + NRRI I++ Sbjct: 258 VYSVAGKAGSDPLYPDDPSLAGNRRIAIVLLR 289 >gi|295678083|ref|YP_003606607.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] gi|295437926|gb|ADG17096.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] Length = 336 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 83/337 (24%), Positives = 146/337 (43%), Gaps = 54/337 (16%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ D+ I++K+ ++ G+WK+ YADFMT +MAFFL+MW++++ K I +Y Sbjct: 4 KDKDRAIVVKRSAPRKH-GHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIAEY 62 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN KI L + ++S LK G + Sbjct: 63 FNQPL-----------------------KITLWGGDRSAEDSSILKGGGRD--------- 90 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 S S E++ ++ + L E + Sbjct: 91 ----------------ISTDAQGVTRSTDGSSNRAERTASRNNEDSVKQLQGEL--ERRE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + V + + ++T TG+ I I+D + PMF + + P Sbjct: 133 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATARDVVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGHTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANASRRELVAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI I+V +++ Sbjct: 253 EAKVMRVLGLASTQNLNKADPLDPENRRISIIVLNKK 289 >gi|209515722|ref|ZP_03264585.1| OmpA/MotB domain protein [Burkholderia sp. H160] gi|209503749|gb|EEA03742.1| OmpA/MotB domain protein [Burkholderia sp. H160] Length = 336 Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 84/337 (24%), Positives = 146/337 (43%), Gaps = 54/337 (16%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ D+ I++K+ + ++ G+WK+ YADFMT +MAFFL+MW++++ K I Y Sbjct: 4 KDKDRAIVVKR-ASPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADY 62 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN KI L + ++S LK G + Sbjct: 63 FNQPL-----------------------KITLWGGDRSAEDSSILKGGGRD--------- 90 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 S S+ E + + + + L L + Sbjct: 91 ----------------ISTDAQGVTRSTDGSSSRAEHTASHNNDDSVKQLQG--ALERQE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + V + + ++T TG+ I I+D + PMF + + P Sbjct: 133 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATARDVVEPY 192 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L I ++GHTDA P+ NW LS DRA ++ + L+ G+ Sbjct: 193 MRDILREIGHTLNDVPNRIIVQGHTDAVPYAGGDKGYSNWELSADRANASRRELIAGGMD 252 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI I+V +R+ Sbjct: 253 EAKVMRVLGLASAQNLNKADPLDPENRRISIIVLNRK 289 >gi|212636367|ref|YP_002312892.1| flagellar motor protein MotB [Shewanella piezotolerans WP3] gi|212557851|gb|ACJ30305.1| MotB protein [Shewanella piezotolerans WP3] Length = 322 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 117/328 (35%), Gaps = 23/328 (7%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KKV D P W +AD M++LM FF+++ + D K I Sbjct: 3 KKVKCDCPPPGAPLWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM--------- 53 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 K F QN E K I + ++ + E + + Sbjct: 54 --KYAFGVQNKVEVKDIPKGTSVIALEFRPGRPESTPIEIINQQTNEMTEPMLEFQEGED 111 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 S + G+ + + E + + + + +++ ++ Sbjct: 112 DSAGGVQQQRGEQRGGESSSTAQEQEDA----QALAKSTSESKSEASKAEAAAQEEINQQ 167 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + L + + + E+ I+I I ++ F S P +++++GE+ Sbjct: 168 VKKMAQELNKEIVDGAIEIESLGQQIIIRIREK---GAFASGSGFLQPRFKPIVRRVGEL 224 Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFA 316 L ++++ GHTD N NW LS RA + +++ G + R+ + G A Sbjct: 225 LKDVPGIVTVSGHTDDWNISNELYSSNWDLSSKRAVAVAHEMIRVKGFDQQRLK-VVGMA 283 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 + ++ + NRR++I +E + Sbjct: 284 SSAPLVENNSQANRARNRRVEIAIEQGK 311 >gi|127513695|ref|YP_001094892.1| flagellar motor protein MotB [Shewanella loihica PV-4] gi|126638990|gb|ABO24633.1| OmpA/MotB domain protein [Shewanella loihica PV-4] Length = 314 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 69/328 (21%), Positives = 119/328 (36%), Gaps = 31/328 (9%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KKV D P W +AD M++LM FF+++ + D K I Sbjct: 3 KKVKCDCPPAGAPMWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM--------- 53 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 K F QN E K I + ++ + E I + Sbjct: 54 --KYAFGVQNKVEVKDIPKGTSVIALEFRPGKPEPTPIEIINQQTNEMTEPTIEVQAGED 111 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 S + E S +E +K++ + ++ D KK Sbjct: 112 DSAGGVQQQRG---------EQRGGEASSTAQEEADSEAQAKQQQQEAASQDQINDRVKK 162 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 ++ L+ + D + E+ I+I I ++ F S P V++++GE+ Sbjct: 163 MAQELNKEIVDGA---IEIESLGQQIIIRIREK---GAFSSGSGFLQPRFKPVIRRVGEL 216 Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFA 316 L +I++ GHTD N NW LS RA + L++ G + R+ + G A Sbjct: 217 LKDVPGIITVSGHTDDMNISNELYSSNWDLSSKRAVAVAHELVRVPGFDQQRMK-VVGMA 275 Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342 + +D + NRR++I +E + Sbjct: 276 STAPLVPNDSAANRARNRRVEIAIEQGK 303 >gi|319405416|emb|CBI79035.1| putative flagellar motor protein MotB [Bartonella sp. AR 15-3] Length = 384 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 93/356 (26%), Positives = 156/356 (43%), Gaps = 21/356 (5%) Query: 4 HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63 D Q + + II+++ D ++ G WKI YADFMT +MA FLV+W++N DD+ K+ Sbjct: 2 KSDDQQSSSEIIIVRRGRHDDHDDHHGGVWKIAYADFMTAMMALFLVLWLVNVQDDEAKE 61 Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST----- 118 AI YFNP + +QN E+ ++ +D + ++ + Sbjct: 62 AIANYFNPIKLVD-PQTSNRGIQQNDIEQDKKSSLDQEHRDDAQSEKLNTTEEAELMLNP 120 Query: 119 ------------NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 + + ++ + L + + S Sbjct: 121 YPGLEKIVQSEYSAQNSAEQQFKQGDLVGQGAGDTQENLQLGTEHHDPFSPYYWKENIDS 180 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 K +N L KE + + LAK ++ + +D + V + + G++I Sbjct: 181 SQKRKNQKQKTLVKETTQENNFSENSRALAKDLTDLIEETNSDIL---VHVKPIKEGVMI 237 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 ++DQ MF S+P TI ++ + ++A I I GHTDA P+R+ DNW+ Sbjct: 238 ELMDQPKYEMFKVGLSVPTARTIDLIASMAGIIAKHQGDIVISGHTDARPYRSTVYDNWQ 297 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 LS RA AY +L++ G+ E RI ++ G+A LK DP + NRRI I + D + Sbjct: 298 LSTARAQMAYYMLVRGGLDEKRILRVEGYADRDLKNKKDPYAAENRRISIFIRDPK 353 >gi|157373190|ref|YP_001471790.1| OmpA/MotB [Shewanella sediminis HAW-EB3] gi|157315564|gb|ABV34662.1| OmpA/MotB [Shewanella sediminis HAW-EB3] Length = 336 Score = 189 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 80/329 (24%), Positives = 137/329 (41%), Gaps = 44/329 (13%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 ++ +IIK++ + + G+WK+ +ADF +MA F+V+WI+ D + I QY N Sbjct: 4 KNEPLIIKRRKRQKRSATHGGAWKVAFADFTLAMMALFMVLWILQIADQQERTMIVQYLN 63 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P SQ+ + + I + T +K + N+ Sbjct: 64 ---------GDMFASGSINPFDLSQSPSMIDLQGSIALQQAIIPATGTGVEKAGPAIHNH 114 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 I ++ ++ P L+ + + Sbjct: 115 IPVGEDNAKAGRG--------------------------------PELNSLVPGKFETQA 142 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L+ LA+++ S ++ + N+ V + G+ I I D + MF + SS P Sbjct: 143 QLEFLAREVDSVITEV---NLSANVEIKVVPQGVRILIHDNVHQFMFTRGSSNMKPYFED 199 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L +G +L ISI GHTD++P+ NW LS RA A +VL GV +I Sbjct: 200 LLMALGPLLGGVENKISISGHTDSTPYAGKTFTNWELSSKRALLARRVLEYGGVKRHQII 259 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVE 339 +++G A I +DP +ANRRI++LV Sbjct: 260 QVTGMADQSPYIQNDPAAAANRRIEMLVL 288 >gi|323529505|ref|YP_004231657.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001] gi|323386507|gb|ADX58597.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001] Length = 328 Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats. Identities = 80/343 (23%), Positives = 136/343 (39%), Gaps = 63/343 (18%) Query: 2 NSHGDKNQENDQFIIIKK-KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 + QE II+++ K A D ++ G+WKI YADF+T +MAFFL+MW++ +T Sbjct: 4 RRSRGEEQEVPPPIIVRRSKKADDHGAHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKF 63 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 K+ IE YFN +L+ ++G + + I + K ++ Sbjct: 64 DKQGIEDYFNTPLSSLLGGNEGAAAARPSVVQGGGRDISDTRPGDGKKTQIE-------- 115 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 ++ ++ + L L + Sbjct: 116 ------------------------------------AATPVNVVPTVAPADAARLQQLKE 139 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + I +++ L+ +I T G+ I I+D +N PMF Sbjct: 140 KLISLIEQSPALKAFKDQIR----------------ISITNEGLRIEIVDSQNRPMFASG 183 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298 S + +L +IG L ISI GHTDA P+ NW LS +RA +A + Sbjct: 184 SPRLQTYAVAILTQIGAALNDVDNRISIAGHTDAVPYTGGPVGYSNWELSSERANAARRA 243 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 L+ G+ +++ ++ G A ++ NRRI ILV ++ Sbjct: 244 LVSGGMHGEKLLQVRGLADVLPLNSNVVDEPTNRRISILVMNK 286 >gi|295690006|ref|YP_003593699.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756] gi|295431909|gb|ADG11081.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756] Length = 299 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 80/333 (24%), Positives = 138/333 (41%), Gaps = 44/333 (13%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 ++Q I+IKK + ++ G+WK+ YADF+T +MAFFL+MW++N T + K+ I YF Sbjct: 4 SSEQPILIKKVKKVSGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNTTSPEQKQGIADYF 63 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 P + T+ G V + Q L Sbjct: 64 APASISSTTSGSGGILGGTSLGDDGAKSDGKMSAIQQMAPEVPDNVEKDGQSTDTANLS- 122 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 L ++ K+E ++ +++ Sbjct: 123 ---------------------------SASEQALRDALAKKEQDSFASAAQSLRQSLQDM 155 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L +L+K+I L + T G+ I ++DQ MF ++S +P Sbjct: 156 PELAELSKQI----------------LIDQTPEGLRIQLVDQEGRSMFQENSKVPNDRAR 199 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 ++L+ + +V+ ++I GHT AS + +W LS RA ++ Q+L +GV +DRI Sbjct: 200 ILLRAVAKVITQLPNRVTISGHTSASAYGKKQDGDWSLSASRADASRQILRAAGVDDDRI 259 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++SG A+ A DP + NRRI I++ + Sbjct: 260 YQVSGKANSEPLYADDPTLAGNRRISIVLLREK 292 >gi|327482425|gb|AEA85735.1| flagellar motor protein MotB [Pseudomonas stutzeri DSM 4166] Length = 337 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 88/334 (26%), Positives = 130/334 (38%), Gaps = 64/334 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 +N Q II+K+ + ++ G+WKI +ADF T +MAFFLVMW++++ + KK I YF Sbjct: 2 DNTQPIIVKRVKKVA-GGHHGGAWKIAFADFATAMMAFFLVMWLMSSATPEQKKLISGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +AS + D P S ++ E +K+ Sbjct: 61 QDPIGFTESASPHVIDLGGTPTPSPDRTLNQVEQEPASKD-------------------- 100 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 D E++ E L + Sbjct: 101 -----------------------------AQFDSEQAETLAEQLERERLDLVLQELQNKV 131 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +L K L + D + I I+D N PMF S+ P Sbjct: 132 DENPELQKFKDQILFEITQDG-------------LRIQIMDAENRPMFALGSAQLQPYFE 178 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + E +A ISI GHTDA PF NW LS RA +A + L+ G E++ Sbjct: 179 DILLALVETIAAVPNKISISGHTDAKPFSGRGDFGNWELSASRANAARRTLVYGGYPEEQ 238 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 I+++ G+A L DP N NRRIDILV ++ Sbjct: 239 IARVVGYASSALFDRKDPFNPVNRRIDILVLTKK 272 >gi|89902463|ref|YP_524934.1| OmpA/MotB [Rhodoferax ferrireducens T118] gi|89347200|gb|ABD71403.1| OmpA/MotB [Rhodoferax ferrireducens T118] Length = 314 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 86/337 (25%), Positives = 139/337 (41%), Gaps = 60/337 (17%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 + + Q II+KK + G+WKI YADF+T +MAFFL+MW++ +T + KK + Sbjct: 4 DGKKLQPIIVKKIKKGGH-VVHGGAWKIAYADFVTAMMAFFLLMWLLGSTSEGDKKGLSD 62 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YF+ K M G N I +T+ S + G + Q + Sbjct: 63 YFSAPLKVSMQGGSGA---------GGSNTILPGGGADLTQKSGQNRRGDGSDPMQKRMA 113 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 N + Q ++ + S K T+ Sbjct: 114 ANAVKAEVAKQDAKKLAGISAKISALISGNTKLTE------------------------- 148 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + + ETT G+ I I+D + PMFD S++ P Sbjct: 149 -----------------------FSRQIRLETTADGLQIQIVDDQKRPMFDSGSAVVKPY 185 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L IS+ GHTD+SP+ + NW LS DRA ++ + L+ +G+ Sbjct: 186 MRDILREIGGALNGVENKISLDGHTDSSPYSSAQRGYSNWELSSDRANASRRELVAAGMP 245 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +D+++++ G A L +P + NRRI I V R+ Sbjct: 246 DDKLARVVGLASSILLDPENPTGAVNRRISITVMTRE 282 >gi|323527738|ref|YP_004229891.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001] gi|323384740|gb|ADX56831.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001] Length = 335 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 80/337 (23%), Positives = 142/337 (42%), Gaps = 54/337 (16%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ D+ I++K+ A + ++ G+WK+ YADFMT +MAFFL+MW++++ K I Y Sbjct: 3 KDKDRAIVVKR-SAPKKSGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASSAQLKGIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + ++ + + Sbjct: 62 FNQPLKITLWGGDRSAEDSSILKGG----------------------------------- 86 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + +TR S+ + T S + + L + Sbjct: 87 --------GRDISTDSQGVTRTSDGSINRSDRTVAHGSEDAMKQLQGE-------LERRE 131 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + V + + ++T TG+ I I+D + PMF + P Sbjct: 132 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATARDQVEPY 191 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L I ++GHTDA + NW LS DRA ++ + L+ G+ Sbjct: 192 MRDILREIGHTLNDVPNRIIVQGHTDAVQYAGGEKGYSNWELSADRANASRRELIAGGMD 251 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DPM+ NRRI I+V +R+ Sbjct: 252 EAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNRK 288 >gi|71906362|ref|YP_283949.1| flagellar motor protein MotB [Dechloromonas aromatica RCB] gi|71845983|gb|AAZ45479.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 316 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 86/337 (25%), Positives = 142/337 (42%), Gaps = 63/337 (18%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ + I+IK+K + + G+WKI YADF+T +MAFFL+MW++ +T + I + Sbjct: 3 DDSTRPIVIKRKKVVA-GGAHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGDLQGIADF 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K G I + +T+ S +K G KK Sbjct: 62 FQNPLKVSQQGGAG---------SGDATSILQGGGKDLTRQSGQVKRGDVEAKKSTSF-- 110 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + K Sbjct: 111 ------------------------------------------------SKEAQAEFRRKE 122 Query: 189 KKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++RL+ L I + K +L + T G+ I I+D++N PMFD SS+ P Sbjct: 123 QERLESLKASIEKMIEQSPQLAQFKKQMLLDITSEGLRIQIVDEQNRPMFDSSSADLKPY 182 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 T +L++IG+ L + IS+ GHTDA+ F NW LS +RA ++ + L+ G+ Sbjct: 183 TRDILRQIGKALNGVSNRISLAGHTDAAQFAGGEKGFSNWELSANRANASRRELVVGGMD 242 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ ++ G A L +DP+NS NRRI I+V +++ Sbjct: 243 DSKVLRVVGLASTVLFDKNDPLNSVNRRISIVVLNQK 279 >gi|113971062|ref|YP_734855.1| flagellar motor protein MotB [Shewanella sp. MR-4] gi|114048292|ref|YP_738842.1| flagellar motor protein MotB [Shewanella sp. MR-7] gi|117921338|ref|YP_870530.1| flagellar motor protein MotB [Shewanella sp. ANA-3] gi|113885746|gb|ABI39798.1| OmpA/MotB domain protein [Shewanella sp. MR-4] gi|113889734|gb|ABI43785.1| OmpA/MotB domain protein [Shewanella sp. MR-7] gi|117613670|gb|ABK49124.1| OmpA/MotB domain protein [Shewanella sp. ANA-3] Length = 306 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 62/325 (19%), Positives = 114/325 (35%), Gaps = 36/325 (11%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 + P W +AD M++LM FF+++ + D K I K Sbjct: 3 KCNCPPPGAPLWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSM-----------K 51 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 F QN E K I D ++ + E + Y + S Sbjct: 52 YAFGVQNKVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTEPVLDYQAGEDDSA 111 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 G+ + + ++ E + ++ KK++ Sbjct: 112 GGVQQQNGSQRGGEASATAQETADAVKAEAAAA--------------QDKINQQVKKMAQ 157 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L+ + D + E+ I+I I ++ F S P V++ +GE+L Sbjct: 158 ELNNEITDGA---IEIESLGQQIIIRIREK---GSFASGSGFLQPRFKPVVRSVGELLKD 211 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 +I++ G+TD + NW LS RA + VL++ G R+ + G A + Sbjct: 212 VPGIITVSGYTDDMQISDELYSSNWDLSSKRAVAVADVLLQVKGFDPKRMK-VVGMASNN 270 Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342 + +D + NRR++I +E + Sbjct: 271 PIVPNDSPENRARNRRVEIAIEQGK 295 >gi|291613013|ref|YP_003523170.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1] gi|291583125|gb|ADE10783.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1] Length = 341 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 85/336 (25%), Positives = 148/336 (44%), Gaps = 59/336 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E+ + I+IK+ + ++ G+WKI YADF+T +MAFFL+MW++ +T + I +YF Sbjct: 4 EDKRPIVIKRIKKVA-GGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGDLQGISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 K + G D + + + +T+ + +K G +K+ L+ Sbjct: 63 KTPLKVALMGGTGSGDSSSIIKGG---------GQDLTRATGQVKSGELLPEKKVINLK- 112 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 E++ K Sbjct: 113 ---------------------------------------------ATQEEFERLERKKEL 127 Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++L+DL I + + +L + T G+ + I+D++N PMF SS P T Sbjct: 128 EKLKDLKANIEKAIDTDVKLKKYKNQILLDLTTEGLRVQIVDEKNRPMFQSGSSELEPYT 187 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L +IG++L IS+ GHTDA P+ NW LS DRA ++ + L+ G++E Sbjct: 188 KDILHEIGQMLNTMPNKISLSGHTDAQPYVTADRHYSNWELSADRANASRRELINGGLAE 247 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 D+I ++ G + L + P+N NRRI I+V +++ Sbjct: 248 DKIVRVVGLSSAVLFDKAQPLNPINRRISIIVMNKR 283 >gi|187925787|ref|YP_001897429.1| flagellar motor protein MotB [Burkholderia phytofirmans PsJN] gi|187716981|gb|ACD18205.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 335 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 85/337 (25%), Positives = 142/337 (42%), Gaps = 54/337 (16%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I Y Sbjct: 3 KDKDRAIVVKR-AAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN KI L + ++S LK G + Sbjct: 62 FNQPL-----------------------KITLWGGDRSAEDSSILKGGGRD--------- 89 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 S + E S + L E + Sbjct: 90 ----------------ISTDAQGVTRSSEGSNNRAEHSAAHGSEDSIKQLQGEL--ERRE 131 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + V + + ++T TG+ I I+D + PMF + P Sbjct: 132 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEPY 191 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L I ++GHTDA+ + NW LS DRA ++ + L+ G+ Sbjct: 192 MRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIGGGMD 251 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DPM+ NRRI I+V +R+ Sbjct: 252 EAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNRK 288 >gi|212637803|ref|YP_002314328.1| MotB protein [Shewanella piezotolerans WP3] gi|212559287|gb|ACJ31741.1| MotB protein [Shewanella piezotolerans WP3] Length = 330 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 82/331 (24%), Positives = 133/331 (40%), Gaps = 44/331 (13%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + I+I++K P + G+WK+ +ADF +MA F+V+WI+ D + I QY Sbjct: 4 RPEPIVIRRKKRTKAKPGHGGAWKVAFADFTLAMMALFMVLWIMQIADQQERTMIVQYLK 63 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 G T S FD P ID + I + + ++ Sbjct: 64 --GDLYSTGSINPFDLSRSPSL-----IDFQGNIAIQQAVLPATSTGVDRSGPAMHNHIP 116 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + + P L+ + + Sbjct: 117 LGK----------------------------------DNVKAGIGPELNSLVPGKFETQA 142 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L+ LA++I ++ + + V + G+ I + D N MF + SS P Sbjct: 143 QLEFLAREIEQVITDVSMNA---NVELQVVPQGVRILMHDNINQFMFTRGSSNMKPYFED 199 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L +G +L +SI GHTD+SP+ NW LS RA A +VL SGV D++ Sbjct: 200 LLMALGPILGKVENKMSISGHTDSSPYAGKTFTNWELSSKRALLARRVLEYSGVQRDQVI 259 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +++G A IA DP +ANRRI++LV Sbjct: 260 QVTGMADQAPYIADDPAAAANRRIEMLVMTS 290 >gi|296157481|ref|ZP_06840316.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] gi|295892253|gb|EFG72036.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] Length = 335 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 78/337 (23%), Positives = 140/337 (41%), Gaps = 54/337 (16%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I Y Sbjct: 3 KDKDRAIVVKR-AAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + ++ + + Sbjct: 62 FNQPLKVTLWGGDRSAEDSSILKGG----------------------------------- 86 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 S + E+S++ + L E + Sbjct: 87 -------------GRDISTDAQGVTRSTDGSNNRSERSVSHNNEDSMKQLQGEL--ERRE 131 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + V + + ++T TG+ I I+D + PMF + P Sbjct: 132 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEPY 191 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L I ++GHTDA+ + NW LS DRA ++ + L+ G+ Sbjct: 192 MRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIAGGMD 251 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DPM+ NRRI I+V +++ Sbjct: 252 EAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNKK 288 >gi|114705809|ref|ZP_01438712.1| flagellar motor protein [Fulvimarina pelagi HTCC2506] gi|114538655|gb|EAU41776.1| flagellar motor protein [Fulvimarina pelagi HTCC2506] Length = 407 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 94/396 (23%), Positives = 153/396 (38%), Gaps = 60/396 (15%) Query: 5 GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 + + Q II+ ++ ++ G WKI +ADFMT +MAFFLVMW+ N+TD+ T+ Sbjct: 12 SEAGHRDHQEIIVVRRRGGGHDEHHGGVWKIAFADFMTAMMAFFLVMWLTNSTDEATRTQ 71 Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ- 123 + QYFNP T + E+ L +E + K+ G ++ Sbjct: 72 VAQYFNPIQLTDSTPASKGLKERQAQSEVEDENQGLVEEEIVGKSGGQPLAGDETGGEEQ 131 Query: 124 ------------------------------------------YQRLENNIFYLSNSQQSE 141 Y+ + + + E Sbjct: 132 ALFRDPYAVLAEIAANSVSTGSGDNEGEPDGTGLTGLNGGDAYRDPFDPQSWQLSPNMRE 191 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK----------- 190 + K + ++ E + + A + Sbjct: 192 SGGELDDLPPAEFKTAVLPPEGTEASETESSAEETGETTVAAKAATGAETDLETEAETAE 251 Query: 191 -----RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 R DL I + L+ + + + V G++IS+ D ++ MF S+ P Sbjct: 252 AAATSRTADLKSDIEAELADM-GEGVPSQVEVSEGEGGLMISLADDFDSGMFSVGSAKPN 310 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + +++KI VL I IRGHTDA PF + DNWRLS RA+ AY +L + G+ Sbjct: 311 GAAVQMMEKIANVLKTRNGRIIIRGHTDARPFTSENYDNWRLSTARAHMAYYMLTRGGLG 370 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +R+ I GFA + K A +P NRRI+IL+ + Sbjct: 371 AERVESIEGFADRQPKDAENPEADINRRIEILLVED 406 >gi|307731388|ref|YP_003908612.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003] gi|307585923|gb|ADN59321.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003] Length = 335 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 84/337 (24%), Positives = 146/337 (43%), Gaps = 54/337 (16%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ D+ I++K+ A + ++ G+WK+ YADFMT +MAFFL+MW++++ K I +Y Sbjct: 3 KDKDRAIVVKR-SAPKKSGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN KI L + ++S LK G + Sbjct: 62 FNQPL-----------------------KITLWGGDRSAEDSSILKGGGRD--------- 89 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 S S E++++ + L E + Sbjct: 90 ----------------ISTDAQGVTRSTDGSSNRAERTVSHSNEDSMKQLQGEL--ERRE 131 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + V + + ++T TG+ I I+D + PMF + P Sbjct: 132 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEPY 191 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L I ++GHTDA + NW LS DRA ++ + L+ G+ Sbjct: 192 MRDILREIGHTLNDVPNRIIVQGHTDAVQYAGGEKGYSNWELSADRANASRRELIAGGMD 251 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DP++ NRRI I+V +R+ Sbjct: 252 EAKVMRVLGLASTQNLNKADPLDPENRRISIIVLNRK 288 >gi|74317262|ref|YP_315002.1| flagellar motor protein MotB [Thiobacillus denitrificans ATCC 25259] gi|74056757|gb|AAZ97197.1| outer membrane chemotaxis MotB protein [Thiobacillus denitrificans ATCC 25259] Length = 319 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 143/336 (42%), Gaps = 63/336 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E II+K+ ++ G+WKI YADF+T +MAFFL+MW++ +T + I +YF Sbjct: 3 EQKAPIIVKRIKKTS-GGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTTRGDLEGIAEYF 61 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 K M G D + + +T+ + +K G + ++ L Sbjct: 62 KTPLKVAMQGGTGSGDSSSVIKGG---------GADLTRKNGQIKKGEVDADRKSYNL-- 110 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + L Sbjct: 111 ------------------------------------------------KAAQAELERLET 122 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L +++ + + + +L + T G+ I I+D++N PMF+ +S+ P T Sbjct: 123 AKLKQLKQRLEAAIDRNPTLKQFKRQLLIDITSEGLRIQIVDEQNRPMFNLASAELQPYT 182 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 V+L +I +VL IS+ GHTDA P+ N NW LS DRA ++ + L+ G+SE Sbjct: 183 KVILHEIAQVLNDVENRISLSGHTDARPYANGERGYSNWELSADRANASRRELIVGGMSE 242 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A + P + NRRI I+V +++ Sbjct: 243 AKMLRVVGLASSVPFTQAKPFDPVNRRISIIVLNKR 278 >gi|254419004|ref|ZP_05032728.1| OmpA family protein [Brevundimonas sp. BAL3] gi|196185181|gb|EDX80157.1| OmpA family protein [Brevundimonas sp. BAL3] Length = 297 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 87/332 (26%), Positives = 137/332 (41%), Gaps = 49/332 (14%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 +D+ I+IKK + ++ G+WK+ YADF+T +MAFFL+MW+IN TD + KK I +YF Sbjct: 2 SDRPILIKKVKKVSGGGHHGGAWKVAYADFVTAMMAFFLLMWLINTTDPEQKKGIAEYFA 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P + T+ G Sbjct: 62 PASVSETTSGSGGILGGTALGDDGPKSSGSQS---------------------------- 93 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + E ++ T S L+ I K E ++ AM+ Sbjct: 94 ---VLEQLAPEAPADATTAGSSTNLASASEAALQAEIQKREAAEFASAAESLRQAMQSMP 150 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L +L+K++ + + T G+ I ++DQ MFD +S+ P V Sbjct: 151 ELAELSKQL----------------IVDQTPEGLRIQLVDQEGRSMFDNNSARPNARAQV 194 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ + +V+ ISI GHT A+P N A +W LS +RA + VL +GV DR Sbjct: 195 LLRAVAKVINQLPNRISITGHTSATPGSNRASGPADWTLSSERANGSRLVLQSAGVDADR 254 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + ++G A DP + NRRI I++ Sbjct: 255 VYSVAGKAGSDPLYPDDPTLAGNRRIAIVLLR 286 >gi|304412488|ref|ZP_07394094.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|307307147|ref|ZP_07586885.1| OmpA/MotB domain protein [Shewanella baltica BA175] gi|304349130|gb|EFM13542.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|306910386|gb|EFN40817.1| OmpA/MotB domain protein [Shewanella baltica BA175] Length = 306 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 74/332 (22%), Positives = 127/332 (38%), Gaps = 61/332 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 ++ IIIK++ + G+WK+ +ADF +MA F+V+WI+ D + I QY Sbjct: 3 HKNEPIIIKRRKRGKRNHGHGGAWKVAFADFTLAMMALFMVLWIMQIADQKERTMIVQYL 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 G + P ++ ID + I S++ + + Sbjct: 63 R-----------GDMNPTGPINPFELSQSSSIIDLEGNMSITPPIIPSSSMPRGGESEGL 111 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 L Q + Sbjct: 112 EEGTLIPGQ-----------------------------------------------FDTQ 124 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +L LA++++ + + + + GI I I D N MF + S+ P Sbjct: 125 AQLTVLARELNRVVQNSS---MAENIAVTIVPQGIRILIHDNVNQFMFTRGSAQMQPYFE 181 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L +G +L + T + I GHTD++P+ NW LS +RA A +VL + GV D++ Sbjct: 182 ELLLSLGPILKNVTNSMVISGHTDSTPYAGNLFTNWELSSERALLARRVLERGGVKRDQV 241 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +++G A IA+D +ANRRI+ L+ Sbjct: 242 IQVTGMADQIPYIATDTAAAANRRIEALILTS 273 >gi|24373103|ref|NP_717146.1| flagellar motor protein MotB [Shewanella oneidensis MR-1] gi|24347292|gb|AAN54590.1|AE015599_2 sodium-driven polar flagellar protein PomB [Shewanella oneidensis MR-1] Length = 308 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 114/325 (35%), Gaps = 36/325 (11%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 + P W +AD M++LM FF+++ + D K I K Sbjct: 3 KCNCPPPGAPLWLATFADLMSLLMCFFVLLLSFSEMDVMKYKQIAGSM-----------K 51 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 F QN E K I D ++ + E + + S Sbjct: 52 YAFGVQNKVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTEPVLDLQAGEDDSS 111 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 G+ + + E K A + ++ KK++ Sbjct: 112 GGTQQQNGSQRGGEASATAQETE--------------DAVKAEAAAAQDKINQQVKKMAQ 157 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L+ +AD + E+ I+I I ++ F S P V++ +GE+L Sbjct: 158 ELNQEIADGA---IEIESLGQQIIIRIREK---GSFASGSGFLQPRFKPVVRSVGELLKD 211 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 +I++ G+TD + NW LS RA + VL++ G R+ + G A + Sbjct: 212 VPGIITVSGYTDDMQISDELYSSNWDLSSKRAVAVADVLLQVKGFDPKRMK-VVGMASNN 270 Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342 + +D + NRR++I +E + Sbjct: 271 PIVPNDSPDNRARNRRVEIAIEQGK 295 >gi|114563951|ref|YP_751465.1| flagellar motor protein MotB [Shewanella frigidimarina NCIMB 400] gi|114335244|gb|ABI72626.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400] Length = 308 Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 123/327 (37%), Gaps = 36/327 (11%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K D P W +AD M++LM FF+++ + D K I Sbjct: 3 KAKCDCPPAGAPMWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM---------- 52 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 K F QN E K I D ++ + + I Y + + Sbjct: 53 -KYAFGVQNKVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTQPTIEYQAGEED 111 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 S + + G + +++ K A ++ + D KK+ Sbjct: 112 SAGGTQKQSGEQRGGNAAATAQQEAEAV--------------KKDAASSQENINDQVKKM 157 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L+ + D + E+ I+I I ++ F S P+ +++ IGE+L Sbjct: 158 AEKLNEEIVDGA---IEIESLGQQIIIRIREK---GSFASGSGFLQPKFKPIVRSIGELL 211 Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317 +I++ GHTD + N NW LS RA + L + SG E R+ + G A Sbjct: 212 KDVPGIITVSGHTDGADINNELYSSNWELSSQRAVAVAHELRRVSGFDESRMK-VVGEAS 270 Query: 318 HRLKIASDPMN--SANRRIDILVEDRQ 342 +R +A+D + NRR++I +E + Sbjct: 271 NRPLVANDSNENQARNRRVEISIEQGK 297 >gi|302878239|ref|YP_003846803.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans ES-2] gi|302581028|gb|ADL55039.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2] Length = 328 Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 78/339 (23%), Positives = 141/339 (41%), Gaps = 59/339 (17%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 +N + I+IK+ + ++ G+WKI YADF+T +MAFFL+MW++ +T I Sbjct: 2 AEDKNKRPIVIKRIKKVA-AGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGDLAGIS 60 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 QYF K + G D + + + +T+ + +K G K+ Sbjct: 61 QYFKTPLKVALAGGSGSGDSSSIIKGG---------GKDLTRTTGQVKAGDVASDKRIIN 111 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ + Sbjct: 112 VKE----------------------------------------------SQQEYLRAERE 125 Query: 187 KRKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K +L++L + I + + +L + T G+ I I+D++N PMF + Sbjct: 126 KEMTKLKELKESIEKAIDNSEKLKQFKSQILLDITSEGLRIQIVDEKNRPMFQSGRAQLE 185 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSG 303 P T +L IG+ L +SI GHTDAS + NW LS DRA ++ + L+ G Sbjct: 186 PYTREILHAIGQTLNDVPNKVSISGHTDASVYGGGGIGYSNWELSADRANASRRELIAGG 245 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++I ++ G + L DP++ NRRI +++ +++ Sbjct: 246 MADEKIVRVVGLSSAVLFKKEDPLSPTNRRISLIIMNKK 284 >gi|319944147|ref|ZP_08018425.1| chemotaxis MotB protein [Lautropia mirabilis ATCC 51599] gi|319742641|gb|EFV95050.1| chemotaxis MotB protein [Lautropia mirabilis ATCC 51599] Length = 309 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 75/334 (22%), Positives = 135/334 (40%), Gaps = 76/334 (22%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 Q I++K+ ++ G+WKI YADF+T +MAFFL+MW++++ ++T K I +YF Sbjct: 8 KAQPIVVKRIKKAAH-GHHGGAWKIAYADFVTAMMAFFLLMWLLSSASENTLKGISEYFQ 66 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 K + G+ D P +T+ + G T K Sbjct: 67 QPLKLSLIGGSGVGDATAPVPGG---------GTDLTRKDGQVNKGITKGKDS------- 110 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 +++ L L + ++ + Sbjct: 111 ---------------------------------------KKDVKLQKLKERLEASIMQVP 131 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETI 249 L+ L +I E T G+ I I+D P+F S++ P Sbjct: 132 ALEALRDQIR----------------LEMTVDGLSIQIVDASKKPLFASGKSTVLSPNMR 175 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA---RDNWRLSLDRAYSAYQVLMKSGVSE 306 +++ IG++L +S+ GHTDA+P+ + NW LS +RA S+ + L++ G+ Sbjct: 176 ELMRTIGKLLNEVENPVSLSGHTDATPYAGGSTGGYSNWELSTERANSSRRELVQGGMDP 235 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 ++I ++ G ++P + NRRI I+V + Sbjct: 236 NKILRVQGLGAVVPLDKTNPNDPMNRRIAIVVLN 269 >gi|91785660|ref|YP_560866.1| flagellar motor protein MotB [Burkholderia xenovorans LB400] gi|91689614|gb|ABE32814.1| outer membrane porin, OmpA/MotB family [Burkholderia xenovorans LB400] Length = 335 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 85/338 (25%), Positives = 146/338 (43%), Gaps = 54/338 (15%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 N++ D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I Sbjct: 2 NKDKDRAIVVKR-AAPKKASHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIAD 60 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YFN KI L + ++S LK G + Sbjct: 61 YFNQPL-----------------------KITLWGGDRSAEDSSILKGGGRD-------- 89 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 S + E+S++ + L E + Sbjct: 90 -----------------ISTDAQGVTRSTDGSNNRSERSVSHNNEDSVKQLQGEL--ERR 130 Query: 188 RKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + RL DL K+ + + V + + ++T TG+ I I+D + PMF + P Sbjct: 131 EQVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEP 190 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGV 304 +L++IG L I ++GHTDA+ + NW LS DRA ++ + L+ G+ Sbjct: 191 YMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIAGGM 250 Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DPM+ NRRI I+V +++ Sbjct: 251 DEAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNKK 288 >gi|260222452|emb|CBA32030.1| Chemotaxis protein motB [Curvibacter putative symbiont of Hydra magnipapillata] Length = 313 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 87/337 (25%), Positives = 144/337 (42%), Gaps = 60/337 (17%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 + + Q IIIK+ + G+WKI YADF+T +MAFFL+MW++ +T + KK I Sbjct: 4 DAKKLQPIIIKRVKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTTEGDKKGISD 62 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YF K Q + N + +T+++ K G Sbjct: 63 YFQSPLKVA---------LQGGAGAGASNSVITGGGNDLTQSAGQSKRGEG--------- 104 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 +EK + K++ L L+ + + Sbjct: 105 -----------------------TEKSAKKNAGEQRKIERAKKDAQTLAALAAKIASTIS 141 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++ + + +I + T G+ I I+D + PMFD SS P Sbjct: 142 NNPKMAEFSSQIKLEI----------------TPDGLQIQIVDDQRRPMFDIGSSSVKPY 185 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG LA IS+ GHTD +P+ N A NW LS DRA ++ + L+ +G+ Sbjct: 186 MRDILKEIGVTLADVDNKISLDGHTDQTPYGNAARGYSNWELSADRANASRRELIAAGMP 245 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E++++++ G A L +P++ ANRRI ILV ++ Sbjct: 246 ENKLARVVGMASSLLADPQNPLSPANRRISILVMTKE 282 >gi|121596103|ref|YP_987999.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42] gi|120608183|gb|ABM43923.1| OmpA/MotB domain protein [Acidovorax sp. JS42] Length = 313 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 80/336 (23%), Positives = 132/336 (39%), Gaps = 60/336 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ Q IIIK+ P + G+WKI YADFMT +MAFFL+MW++ +T + I Y Sbjct: 3 EKKLQPIIIKRAKKRPHAP-HGGAWKIAYADFMTAMMAFFLLMWLLGSTAKGELQGIAAY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F+ K M G + + ++K ++ +++ Sbjct: 62 FSSPLKVAMQGGDGAGNSSSVIPGG---------GNDLSKVHGQVRRSNSDSPTN----- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 +++ + L + + Sbjct: 108 ---------------------------MRSSVEASRAERARQDAQRIKALQTKIEAMITE 140 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL + +I L T G+ I I+D +N PMFD S++ P Sbjct: 141 SPRLNEYRSQIRLDL----------------TPDGLQIQIVDDQNRPMFDSGSALVKPYM 184 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L +IG L IS+ GHTDA P+ N NW LS DRA ++ + L+ +G+ + Sbjct: 185 RDILHQIGAALGGVENRISLSGHTDAVPYGNGDRGYSNWELSADRANASRRELVAAGMPD 244 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A L +P + NRRI I V + Sbjct: 245 AKLGRVVGMAASDLLEPQNPRAAVNRRITITVLTHE 280 >gi|126176136|ref|YP_001052285.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155] gi|125999341|gb|ABN63416.1| OmpA/MotB domain protein [Shewanella baltica OS155] Length = 306 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 74/332 (22%), Positives = 127/332 (38%), Gaps = 61/332 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 ++ IIIK++ + G+WK+ +ADF +MA F+V+WI+ D + I QY Sbjct: 3 HKNEPIIIKRRKRGKRNHGHGGAWKVAFADFTLAMMALFMVLWIMQIADQKERTMIVQYL 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 G + P ++ ID + I S++ + + Sbjct: 63 R-----------GDMNPTGPINPFELSQSSSIIDLEGNMSIAPPIIPSSSMPRGGESEGL 111 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 L Q + Sbjct: 112 EEGTLIPGQ-----------------------------------------------FDTQ 124 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +L LA++++ + + + + GI I I D N MF + S+ P Sbjct: 125 AQLTVLARELNRVVQNSS---MAENIAVTIVPQGIRILIHDNVNQFMFTRGSAQMQPYFE 181 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L +G +L + T + I GHTD++P+ NW LS +RA A +VL + GV D++ Sbjct: 182 ELLLSLGPILKNVTNSMVISGHTDSTPYAGNLFTNWELSSERALLARRVLERGGVKRDQV 241 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +++G A IA+D +ANRRI+ L+ Sbjct: 242 IQVTGMADQIPYIATDTAAAANRRIEALILTS 273 >gi|120599624|ref|YP_964198.1| flagellar motor protein MotB [Shewanella sp. W3-18-1] gi|146292382|ref|YP_001182806.1| flagellar motor protein MotB [Shewanella putrefaciens CN-32] gi|120559717|gb|ABM25644.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1] gi|145564072|gb|ABP75007.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32] gi|319425682|gb|ADV53756.1| stator-force generator of Na+ coupled flagellar motor, PomB [Shewanella putrefaciens 200] Length = 308 Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 114/325 (35%), Gaps = 36/325 (11%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 P W +AD M++LM FF+++ + D K I K Sbjct: 3 KCKCPPPGAPLWLATFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------K 51 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 F QN E K I D ++ + E + + + S Sbjct: 52 FAFGVQNKVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTEPVLDFQAGEDDSA 111 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + G+ + + +++ + + ++ KK++ Sbjct: 112 GGVQQQRGEQRGGEASSTAQETAEAVKADAAAA--------------QDKINQQVKKMAQ 157 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L+ + D + E+ I+I I ++ F S P V++ +GE+L Sbjct: 158 ELNKEIIDGA---IEIESLGQQIIIRIREK---GSFASGSGFLQPRFKPVVRSVGELLKD 211 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 VI++ G+TD + NW LS RA + L++ G R+ + G A + Sbjct: 212 VPGVITVAGYTDDMQISDELYSSNWDLSSKRAVAVAHELVQVKGFDSKRMK-VVGMASNN 270 Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342 + +D + NRR++I +E + Sbjct: 271 PIVPNDSPENRARNRRVEIAIEQGK 295 >gi|315180895|gb|ADT87809.1| sodium-driven polar flagellar protein [Vibrio furnissii NCTC 11218] Length = 320 Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 111/326 (34%), Gaps = 29/326 (8%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 P L +W +AD M++LM FF+++ + D K I Sbjct: 4 QKCKCPPPGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 52 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 53 KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGDADR 112 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 G+ +T ++ + + + +++ + Sbjct: 113 AGGTQRDAGQLTGGQSPETAT----------QDNQNTETEMQQQQAQSQSMSEEMETVLE 162 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 S L + + E I+I I ++ F + S+ P+ ++++I +++ Sbjct: 163 SIKKALQREIEQGAIEVENLGQQIVIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVK 219 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 ++ + GHTD + R NW LS RA S Q + K G + R+ ++ G A Sbjct: 220 DVPGIVRVSGHTDNQRLDSELYRSNWDLSAQRAVSVAQEMEKVKGFNHQRL-QVRGMADT 278 Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342 +D S NRR++I + + Sbjct: 279 DPLGPNDTEAQRSRNRRVEISIMQGE 304 >gi|126173599|ref|YP_001049748.1| flagellar motor protein MotB [Shewanella baltica OS155] gi|152999879|ref|YP_001365560.1| flagellar motor protein MotB [Shewanella baltica OS185] gi|160874504|ref|YP_001553820.1| flagellar motor protein MotB [Shewanella baltica OS195] gi|217974157|ref|YP_002358908.1| flagellar motor protein MotB [Shewanella baltica OS223] gi|304409470|ref|ZP_07391090.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|307303828|ref|ZP_07583581.1| OmpA/MotB domain protein [Shewanella baltica BA175] gi|125996804|gb|ABN60879.1| OmpA/MotB domain protein [Shewanella baltica OS155] gi|151364497|gb|ABS07497.1| OmpA/MotB domain protein [Shewanella baltica OS185] gi|160860026|gb|ABX48560.1| OmpA/MotB domain protein [Shewanella baltica OS195] gi|217499292|gb|ACK47485.1| OmpA/MotB domain protein [Shewanella baltica OS223] gi|304351988|gb|EFM16386.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|306912726|gb|EFN43149.1| OmpA/MotB domain protein [Shewanella baltica BA175] gi|315266742|gb|ADT93595.1| OmpA/MotB domain protein [Shewanella baltica OS678] Length = 310 Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 116/327 (35%), Gaps = 36/327 (11%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + P W +AD M++LM FF+++ + D K I Sbjct: 3 KAKCNCPPAGAPMWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSM---------- 52 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 K F QN E K I D ++ + E + Y + Sbjct: 53 -KYAFGVQNKVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTEPVLDYQAGEDD 111 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 S + G+ + ++ ++ E + ++ KK+ Sbjct: 112 SAGGVQQQSGSQRGGEATATAQEVADAVKAEAAAA--------------QDKINQEVKKM 157 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L+ + D + E+ I+I I ++ F S P V++ +GE+L Sbjct: 158 AQELNKEITDGA---IEIESLGQQIIIRIREK---GAFASGSGFLQPRFKPVVRSVGELL 211 Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317 +I++ G+TD + NW LS RA + L++ G R+ + G A Sbjct: 212 KDVPGIITVSGYTDDMQISDELYSSNWDLSSKRAVAVAHELVQVKGFDSKRMK-VVGMAS 270 Query: 318 HRLKIASDP--MNSANRRIDILVEDRQ 342 + + +D + NRR++I +E + Sbjct: 271 NNPIVPNDSPENRARNRRVEIAIEQGK 297 >gi|285019703|ref|YP_003377414.1| flagellar motor protein [Xanthomonas albilineans GPE PC73] gi|283474921|emb|CBA17420.1| probable flagellar motor protein [Xanthomonas albilineans] Length = 383 Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats. Identities = 81/334 (24%), Positives = 136/334 (40%), Gaps = 58/334 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +II++ + ++ G+WK+ YADF+T +MAFFLV+W++ AT + + AI +Y Sbjct: 3 ETKSTVIIRRVKKVQGGGHHGGAWKVAYADFVTAMMAFFLVLWLVAATTKEQRAAIAEY- 61 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F +P S S+ GS ++ Sbjct: 62 --------------FRNPSPLAGKSPAPSPGMAGPGGASTSMIKLGGSGELQRG------ 101 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + + L + K K Sbjct: 102 -----------------------------------NNKDPFGSKSLKGDDSKISQREKEK 126 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L +++ + + +L + T G+ I I+D+ N PMFD S++ P T Sbjct: 127 QRLESLMQEMKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKENRPMFDLGSAVLKPYT 186 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L ++ + ISI GHTD + + NW LS DRA +A + L+ G+SED Sbjct: 187 RGILHELSGFINQVPNHISITGHTDVTQYSGKNGYSNWELSADRANAARRELVAGGMSED 246 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++S++ G + L P N NRRI I+V + Sbjct: 247 KVSRVVGLSSSVLFDKQVPNNPINRRISIVVMTK 280 >gi|120597323|ref|YP_961897.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1] gi|120557416|gb|ABM23343.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1] Length = 305 Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 72/332 (21%), Positives = 123/332 (37%), Gaps = 62/332 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 ++ IIIK++ + G+WK+ +ADF +MA F+V+WI+ D + I QY Sbjct: 3 HKNEPIIIKRRKRGKRNHGHGGAWKVAFADFTLAMMALFMVLWIMQIADQKERTMIVQYL 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 G + P ++ ID + I S + Sbjct: 63 R-----------GDMNPTGPINPFELSQSSSIIDLEGNMSIAPTIIPSHPSPRAGAEGIE 111 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + Sbjct: 112 EGALIPG------------------------------------------------QFDTQ 123 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 ++L LA++++ + + + + GI I I D N MF + S+ P Sbjct: 124 EQLTVLARQLNRVVQSSS---MAENITVTIVPQGIRILIHDNVNRFMFTRGSAQMQPYFE 180 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L +G +L + T + I GHTD++P+ NW LS +RA A +VL + GV D++ Sbjct: 181 ELLLSLGPILKNITNSMVISGHTDSTPYAGSLFTNWELSSERALLARRVLERGGVKRDQV 240 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +++G A I SD +ANRRI+ L+ Sbjct: 241 IQVTGMADQVPYITSDTAAAANRRIEALILTS 272 >gi|170694367|ref|ZP_02885521.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] gi|170140790|gb|EDT08964.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] Length = 335 Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 81/337 (24%), Positives = 147/337 (43%), Gaps = 54/337 (16%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW++++ K I +Y Sbjct: 3 KDKDRAIVVKR-AAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN KI L + ++S LK G + Sbjct: 62 FNQPL-----------------------KITLWGGDRSAEDSSILKGGGRD--------- 89 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 ++ D++ ++ ++ + L + Sbjct: 90 ------------------ISTDAQGVTRSTDGSNNRAERTVSKSSEDSMKQLQGELERRE 131 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + V + + ++T TG+ I I+D + PMF + P Sbjct: 132 QVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATARDQVEPY 191 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L I ++GHTDA+ + NW LS DRA ++ + L+ G+ Sbjct: 192 MRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIAGGMD 251 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + +DPM+ NRRI ++V +R+ Sbjct: 252 EAKVMRVLGLASTQNLNKADPMDPENRRISVIVLNRK 288 >gi|146294532|ref|YP_001184956.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32] gi|145566222|gb|ABP77157.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32] Length = 305 Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 72/332 (21%), Positives = 123/332 (37%), Gaps = 62/332 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 ++ IIIK++ + G+WK+ +ADF +MA F+V+WI+ D + I QY Sbjct: 3 HKNEPIIIKRRKRGKRNHGHGGAWKVAFADFTLAMMALFMVLWIMQIADQKERTMIVQYL 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 G + P ++ ID + I S + Sbjct: 63 R-----------GDMNPTGPINPFELSQSSSIIDLEGNMSIAPAIIPSHPSPRAGAEGIE 111 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + Sbjct: 112 EGALIPG------------------------------------------------QFDTQ 123 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 ++L LA++++ + + + + GI I I D N MF + S+ P Sbjct: 124 EQLTVLARQLNRVVQSSS---MAENITVTIVPQGIRILIHDNVNRFMFTRGSAQMQPYFE 180 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L +G +L + T + I GHTD++P+ NW LS +RA A +VL + GV D++ Sbjct: 181 ELLLSLGPILKNITNSMVISGHTDSTPYAGSLFTNWELSSERALLARRVLERGGVKRDQV 240 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +++G A I SD +ANRRI+ L+ Sbjct: 241 IQVTGMADQVPYITSDTAAAANRRIEALILTS 272 >gi|260767264|ref|ZP_05876205.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972] gi|260617772|gb|EEX42950.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972] Length = 320 Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 111/326 (34%), Gaps = 29/326 (8%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 P L +W +AD M++LM FF+++ + D K I Sbjct: 4 QKCKCPPPGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 52 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 53 KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGDADR 112 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 G+ +T ++ + + + +++ + Sbjct: 113 AGGTQRDAGQLTGGQSPETAT----------QDNQNTETEMQQQQAQSQSMSEEMETVLE 162 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 S L + + E I+I I ++ F + S+ P+ ++++I +++ Sbjct: 163 SIKKALQREIEQGAIEVENLGQQIVIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVK 219 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 ++ + GHTD + R NW LS RA S Q + K G + R+ ++ G A Sbjct: 220 DVPGIVRVSGHTDNQRLDSELYRSNWDLSAQRAVSVAQEMEKVKGFNHQRL-QVRGMADT 278 Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342 +D S NRR++I + + Sbjct: 279 DPLGPNDTEAQRSRNRRVEISIMQGE 304 >gi|119775566|ref|YP_928306.1| flagellar motor protein MotB [Shewanella amazonensis SB2B] gi|119768066|gb|ABM00637.1| sodium-driven polar flagellar protein PomB [Shewanella amazonensis SB2B] Length = 312 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 112/327 (34%), Gaps = 36/327 (11%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + P W +AD M++LM FF+++ + D K I Sbjct: 3 KAKCNCPPPGAPLWLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSM---------- 52 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 K F QN E K I + ++ + E + + + Sbjct: 53 -KYAFGVQNKVEVKDIPKGTSVIALEFRPGKPEPTPIEIINQQTNEMTEPILDFQEGESE 111 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 S G+ + + + + ++ + KK+ Sbjct: 112 SAGGVQQQQGSQRGGEASSTAQE--------------TAESTQSDSSSSQELINQQVKKM 157 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L+ + D + E+ I+I I ++ F S P V++ +GE+L Sbjct: 158 AEQLNEEIVDGA---IEIESLGQQIIIRIREK---GAFGSGSGFLQPRFRPVIRAVGELL 211 Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317 +I++ G+TD N NW LS RA S L+K G R+ + G Sbjct: 212 KDVPGIITVSGYTDDMQISNELYSSNWDLSSKRAVSVAHELVKVKGFDSSRMK-VVGMGS 270 Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342 + + ++ + NRR++I +E + Sbjct: 271 NNPLVPNESAENRARNRRVEIAIEQGK 297 >gi|59711322|ref|YP_204098.1| flagellar motor protein MotB [Vibrio fischeri ES114] gi|197335182|ref|YP_002155478.1| flagellar motor protein [Vibrio fischeri MJ11] gi|59479423|gb|AAW85210.1| flagellar motor protein MotB1 [Vibrio fischeri ES114] gi|197316672|gb|ACH66119.1| flagellar motor protein [Vibrio fischeri MJ11] Length = 309 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 109/322 (33%), Gaps = 36/322 (11%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 P W +AD T+LM FF+++ + D K I K F Sbjct: 8 KCPPGAPLWMATFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAF 56 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 QN E K I + + ++ + + + Sbjct: 57 GVQNVLEVKDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDIPQKTLDFHDGESDRAGGT 116 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 G+ ST ++ + + + Q+L I L Sbjct: 117 KREAGKQTGGESPSNSTQ--------------TSAQSNSESESQTQSQQELEDTIKKALE 162 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 +++ + E ++I I ++ F S+ P+ ++++I E++ Sbjct: 163 REISEGA---IEVENLGQQLVIRIREK---GAFPAGSAFLQPKFRPLIRQIAELVKDVPG 216 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322 +I + GHTD P + R NW LS RA S + + G DR+ ++ G A + Sbjct: 217 IIRVSGHTDNQPLDSELYRSNWDLSAQRAVSVALEMERVKGFESDRL-RVRGMASTEPLV 275 Query: 323 ASDPM--NSANRRIDILVEDRQ 342 ++ + NRR++I + + Sbjct: 276 SNKTAEGRARNRRVEISIMQGK 297 >gi|254699266|ref|ZP_05161094.1| flagellar motor protein MotB [Brucella suis bv. 5 str. 513] gi|261749708|ref|ZP_05993417.1| flagellar motor protein MotB [Brucella suis bv. 5 str. 513] gi|261739461|gb|EEY27387.1| flagellar motor protein MotB [Brucella suis bv. 5 str. 513] Length = 345 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 74/351 (21%), Positives = 139/351 (39%), Gaps = 24/351 (6%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + + II+++ D ++ G WKI YADFMT + ++F + Sbjct: 4 EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMASYF---------NPVKLMDRH 54 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS-----------VDLKI 115 K F+ E S++ D ++ + +L Sbjct: 55 SSPKGVENVDQRDGKVRFESDQQVESSTKVVNDTTVRPASDQEERQLFREPYAMLAELAH 114 Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 + + Q + + ++ ++ + S DL + Sbjct: 115 ETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGDLTPPAPQTVPQTA 174 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK----GVLFETTRTGILISIIDQ 231 P + A +++ + DL K + + V G++I + D+ Sbjct: 175 PLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVVPVEGGVMIQLTDK 234 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + MF S+ P + +L++I +V+A + I GHTDA PF++ DNWRLS R Sbjct: 235 VDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFKSATYDNWRLSSAR 294 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 A AY +L++ G+ E R+ ++ G+A + K +DP + NRRIDI ++ + Sbjct: 295 AQMAYYMLVRGGLDEKRVLRVEGYADRQPKNPNDPNAAENRRIDIFIKSKP 345 >gi|2130949|dbj|BAA20285.1| PomB [Vibrio alginolyticus] Length = 315 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 D P L W +AD M++LM FF+++ + D K I Sbjct: 6 NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 55 KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 K T + +N ++ + + + ++ L + I Sbjct: 115 AGGTKRDEG---------KLTGGQSPATSTQNNESAEADMQQQQSKEMSQEMETLMESIK 165 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + + E I+I + ++ F + S+ P+ ++++I E++ Sbjct: 166 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 219 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 ++ + GHTD P + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 220 DVPGIVRVSGHTDNRPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 278 Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342 + +D + NRR++I + + Sbjct: 279 EPLLPNDSDDNRALNRRVEISIMQGE 304 >gi|269965067|ref|ZP_06179232.1| flagellar motor protein [Vibrio alginolyticus 40B] gi|269830370|gb|EEZ84595.1| flagellar motor protein [Vibrio alginolyticus 40B] Length = 315 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 D P L W +AD M++LM FF+++ + D K I Sbjct: 6 NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 55 KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 K T + +N ++ + + + ++ L + I Sbjct: 115 AGGTKRDEG---------KLTGGQSPETSTQNNESAEADMQQQQSKEMSQEMETLMESIK 165 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + + E I+I + ++ F + S+ P+ ++++I E++ Sbjct: 166 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 219 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 ++ + GHTD P + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 220 DVPGIVRVSGHTDNRPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 278 Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342 + +D + NRR++I + + Sbjct: 279 EPLLPNDSDDNRALNRRVEISIMQGE 304 >gi|308048595|ref|YP_003912161.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] gi|307630785|gb|ADN75087.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] Length = 314 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 67/329 (20%), Positives = 118/329 (35%), Gaps = 36/329 (10%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 K+K A +W +AD T+LM FF+++ + D K I Sbjct: 7 KRKQA-----AGAPAWMATFADLATLLMCFFVLLLAFSEMDVLKFKQIAGSM-------- 53 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 K F QN E + I + D Q++ + + + Y Sbjct: 54 ---KYAFGVQNKVEVKDIPRGTSVIAQEFRPGRPDPTPIEVIQQQTVEFTRDMLNYQPGE 110 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + + + +S G + + + + + +L K Sbjct: 111 SDQAGGQQNQSGNSRGGTSSQTA---------NQPRAEQSNQSQTRTSASDADNVNELTK 161 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 KI+ L + D + E+ I+I I ++ F S+ P V+ +G Sbjct: 162 KIAQQLEDQILDGA---IEVESLGQQIIIRIREK---GAFPAGSAFLQPRFRPVIHAVGN 215 Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGF 315 +L +IS+ GHTD + N R NW LS RA S L+K G R+ ++ G Sbjct: 216 LLKDVPGIISVTGHTDNTTIDNELYRSNWELSTQRAVSVAHELVKVEGFDPGRM-ELRGV 274 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQ 342 A + +++D NRR++I + + Sbjct: 275 AENEPLVSNDTWEGRVRNRRVEITINQGK 303 >gi|222112258|ref|YP_002554522.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY] gi|221731702|gb|ACM34522.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY] Length = 313 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 79/336 (23%), Positives = 132/336 (39%), Gaps = 60/336 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ Q IIIK+ P + G+WKI YADF+T +MAFFL+MW++ +T + I Y Sbjct: 3 EKKLQPIIIKRAKKRPHAP-HGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQGIAAY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F+ K M G + + ++K ++ +++ Sbjct: 62 FSSPLKVAMQGGDGAGNSSSVIPGG---------GNDLSKVHGQVRRSNSDSSTN----- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 +++ + L + + Sbjct: 108 ---------------------------MRSSVEASRAERARQDAQRIKALQTKIEAMITE 140 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL + +I L T G+ I I+D +N PMFD S++ P Sbjct: 141 NPRLNEYRSQIRLDL----------------TPDGLQIQIVDDQNRPMFDSGSALVKPYM 184 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L +IG L IS+ GHTDA P+ N NW LS DRA ++ + L+ +G+ + Sbjct: 185 RDILHQIGAALGGVENRISLSGHTDAVPYGNGDRGYSNWELSADRANASRRELVAAGMPD 244 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A L +P + NRRI I V + Sbjct: 245 AKLGRVVGMAASDLLEPQNPRAAVNRRITITVLTHE 280 >gi|91776291|ref|YP_546047.1| flagellar motor protein MotB [Methylobacillus flagellatus KT] gi|91710278|gb|ABE50206.1| OmpA/MotB [Methylobacillus flagellatus KT] Length = 308 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 75/335 (22%), Positives = 142/335 (42%), Gaps = 62/335 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + I+ K++ ++ G+WKI YADF+T +MAFFL+MW++ +T + I +YF Sbjct: 3 KENVRIVVKRINKHAGGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTTKADLQGISEYFK 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 K M G + + + +TK ++ ++ L+ Sbjct: 63 TPLKVAMQGGSGA---------GASDSVLKGGGNDMTKKQGQIRRAEDIDARKKPDLKTA 113 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ + Sbjct: 114 QEEVA--------------------------------------------------KAELE 123 Query: 191 RLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +L++L ++I + + K +L + T G+ I I+D++N PMF S + P Sbjct: 124 KLKELKRRIEEAIDASETLRQFKKQLLLDITTEGLRIQIVDEQNRPMFASSKAELQPYAR 183 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSED 307 +L +IG++L IS+ GHTDA+P+ + NW LS DRA ++ + L+ G+ E+ Sbjct: 184 QILHEIGQLLNDVPNKISLSGHTDAAPYPSGERYYSNWELSSDRANASRRELVSGGMKEE 243 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G + L +P+N NRRI I++ +++ Sbjct: 244 KLLRVVGLSSAVLFDKDNPLNPINRRISIIIMNKK 278 >gi|237731926|ref|ZP_04562407.1| flagellar motor protein MotB [Citrobacter sp. 30_2] gi|226907465|gb|EEH93383.1| flagellar motor protein MotB [Citrobacter sp. 30_2] Length = 309 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 80/333 (24%), Positives = 126/333 (37%), Gaps = 71/333 (21%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 I++K++ + GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 6 HPIIVVKRRKHKNHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 +T I + Q+P + + + N DL+ Sbjct: 66 PLATAVTGGNRISNSQSPIPGGGDDYTQQQGEVNKQPNIDDLR----------------- 108 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + E L L + ++ + Sbjct: 109 ------------------------------------KRMEQSRLSKLRGDLDQLIESDPK 132 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L+ L + L G+ I IID +N PMF S+ P + Sbjct: 133 LRALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSAEVEPYMRDI 176 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L+ I VL IS+ GHTD P+ N NW LS DRA ++ + L+ G+ + ++ Sbjct: 177 LRAIAPVLNGIPNRISLSGHTDDYPYANGEKGYSNWELSADRANASRRELVSGGLDDGKV 236 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ G A P ++ NRRI +LV ++Q Sbjct: 237 LRVVGMAATMRLSDRGPEDAINRRISLLVLNKQ 269 >gi|4322001|gb|AAD15905.1| sodium-driven polar flagellar protein [Vibrio parahaemolyticus] Length = 315 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 62/326 (19%), Positives = 115/326 (35%), Gaps = 31/326 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 D P L W +AD M++LM FF+++ + D K I Sbjct: 6 NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 55 KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 G+ ST +S ++ + + K+ Q++ + Sbjct: 115 AGGTKRDEGKLTGGQSPETSTQSNQS------------AESDMQQQQSKEMSQEMETLME 162 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 S L + + E I+I + ++ F + S+ P+ ++++I E++ Sbjct: 163 SIKKALEREIEQGAIEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 219 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 ++ I GHTD + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 220 DVPGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 278 Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342 + +D + NRR++I + + Sbjct: 279 EPLVPNDSDENRALNRRVEISIMQGE 304 >gi|258621630|ref|ZP_05716662.1| flagellar motor protein [Vibrio mimicus VM573] gi|262165143|ref|ZP_06032880.1| Flagellar motor rotation protein MotB [Vibrio mimicus VM223] gi|258586102|gb|EEW10819.1| flagellar motor protein [Vibrio mimicus VM573] gi|262024859|gb|EEY43527.1| Flagellar motor rotation protein MotB [Vibrio mimicus VM223] Length = 319 Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 114/324 (35%), Gaps = 31/324 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 P L +W +AD M++LM FF+++ + D K I Sbjct: 5 QQCKCPPPGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 54 KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLDFQEGDSDR 113 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + K T + + + ++ ++ A ++++ +A+ I Sbjct: 114 AGGNQRDSG---------KLTGGQSAESSTQDNQNTQSEMQQQQAKAMSEQMETVAESIK 164 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 LS + + E I I I ++ F + S+ P+ ++++I +++ Sbjct: 165 KALSREIEQGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVK 218 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 + + GHTD + R NW LS RA S Q + K G R+ ++ G A Sbjct: 219 DIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHQRL-QVRGMADT 277 Query: 319 RLKIASDPM--NSANRRIDILVED 340 + +D + NRR++I + Sbjct: 278 QPIGPNDTEAQRALNRRVEISILQ 301 >gi|157145319|ref|YP_001452639.1| flagellar motor protein MotB [Citrobacter koseri ATCC BAA-895] gi|157082524|gb|ABV12202.1| hypothetical protein CKO_01059 [Citrobacter koseri ATCC BAA-895] Length = 308 Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 79/336 (23%), Positives = 126/336 (37%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQPHPIIVVKRRKHKGHGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P ++ + + N +LK Sbjct: 62 FRTPLATAITGGHRIANSESPIPGGGEDYTQQQGEVNKQPNIDELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLSKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L G+ I IID +N PMF S+ P Sbjct: 129 DPKLRALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSAEVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + L+ G+ + Sbjct: 173 RDILRGIAPVLNGIPNRISLSGHTDDFPYASGERGYSNWELSADRANASRRELVVGGLDD 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 268 >gi|160896052|ref|YP_001561634.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1] gi|160361636|gb|ABX33249.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1] Length = 345 Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 81/336 (24%), Positives = 139/336 (41%), Gaps = 60/336 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ Q IIIK+ P + G+WKI YADF+T +MAFFL+MW++ +T + I Y Sbjct: 3 EKKLQPIIIKRVKKTAHAP-HGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQGIAAY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F+ K M G + + Sbjct: 62 FSSPLKVAMAGGDGAGNSSSVIPGGG---------------------------------- 87 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 N H + + ++ + ++ + L + + Sbjct: 88 -------NDLAKVHGQVRRSEAADSSNRRTSVDAGRADQAQVDSNRIKALKAKVDAMITS 140 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL + +I + + T G+ I I+D++N PMFD S++ P Sbjct: 141 NARLNEFRSQIRTDV----------------TPDGLQIQIVDEQNRPMFDSGSAMVKPYM 184 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+++G LA + IS+ GHTDA+P+ N NW LS DRA ++ + L+ +G+ Sbjct: 185 RDILREVGAALAGAENRISLSGHTDAAPYGNADRGYSNWELSSDRANASRRELVAAGMPL 244 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++I+G A L + DP NRRI I V ++ Sbjct: 245 NQLARITGLASSDLLLPDDPRAPQNRRITITVLTQE 280 >gi|120613045|ref|YP_972723.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1] gi|120591509|gb|ABM34949.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1] Length = 312 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 79/337 (23%), Positives = 133/337 (39%), Gaps = 62/337 (18%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + Q IIIK+ + G+WKI YADF+T +MAFFL+MW++ +T + I Y Sbjct: 3 DKKLQPIIIKRVKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQGIAAY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K M Q + + I ++K ++ ++ + Sbjct: 62 FASPLKVAM---------QGGDGSGNSSSIIPGGGNDLSKVHGQVRRSDSDTATSRRTNI 112 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 N A + Sbjct: 113 EN-------------------------------------------------ARAEQARQD 123 Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + R++ L KI + + + + T G+ I I+D +N PMFD S++ P Sbjct: 124 QMRIKALQAKIDALISENPRLKEFKSQIRIDVTPDGLQIQIVDDQNRPMFDSGSALVKPY 183 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L IS+ GHTDA+P+ N NW LS DRA ++ + L+ +G+ Sbjct: 184 MRDILREIGSALGGVENRISLAGHTDAAPYGNGDRGYSNWELSADRANASRRELVAAGMP 243 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ ++ G A L +P NRRI I + ++ Sbjct: 244 DAKLGRVVGLAASDLLEPDNPRAPVNRRITITILTKE 280 >gi|258624381|ref|ZP_05719329.1| flagellar motor protein [Vibrio mimicus VM603] gi|258583343|gb|EEW08144.1| flagellar motor protein [Vibrio mimicus VM603] Length = 319 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 114/324 (35%), Gaps = 31/324 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 P L +W +AD M++LM FF+++ + D K I Sbjct: 5 QQCKCPPPGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 54 KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLDFQEGDSDR 113 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + K T + + + ++ ++ A ++++ +A+ I Sbjct: 114 AGGNQRDSG---------KLTGGQSAESSTQDNQNTQSEMQQQQAKAMSEQMETVAESIK 164 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 LS + + E I I I ++ F + S+ P+ ++++I +++ Sbjct: 165 KALSREIEQGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVK 218 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 + + GHTD + R NW LS RA S Q + K G R+ ++ G A Sbjct: 219 DIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHQRL-QVRGMADT 277 Query: 319 RLKIASDPM--NSANRRIDILVED 340 + +D + NRR++I + Sbjct: 278 QPLGPNDTEAQRALNRRVEISILQ 301 >gi|323495111|ref|ZP_08100198.1| flagellar motor protein MotB [Vibrio brasiliensis LMG 20546] gi|323310662|gb|EGA63839.1| flagellar motor protein MotB [Vibrio brasiliensis LMG 20546] Length = 314 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 112/326 (34%), Gaps = 31/326 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 P L W +AD M++LM FF+++ + D K I Sbjct: 5 NDCKCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 54 KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDR 113 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 G+ ST ++ E+ + + + L+ L + I Sbjct: 114 AGGTQRDKGSLTGGQSPDTSTQNNQNSES---------DNEQQQSAEMSQELETLMESIK 164 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + + E I I I ++ F + S+ P+ ++++I +++ Sbjct: 165 KALEREIEQGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVK 218 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 V+ + GHTD + R NW LS RA S Q + K G + +R+ ++ G A Sbjct: 219 DIPGVVRVSGHTDNQRIDSELYRSNWDLSAQRAVSVAQEMEKVRGFNHERL-RVRGMADT 277 Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342 +D S NRR++I + + Sbjct: 278 EPLGPNDTEAQRSRNRRVEISIMQGE 303 >gi|156973487|ref|YP_001444394.1| flagellar motor protein MotB [Vibrio harveyi ATCC BAA-1116] gi|156525081|gb|ABU70167.1| hypothetical protein VIBHAR_01177 [Vibrio harveyi ATCC BAA-1116] Length = 314 Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 D P L W +AD M++LM FF+++ + D K I Sbjct: 5 NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 54 KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 113 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 +D K T + N ++ + + + ++ L + I Sbjct: 114 AGG---------TKRDQGKLTGGQSPETSTHNNQSAESDMQQQQSEQTSQEMETLMESIK 164 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + + E I+I + ++ F + S+ P+ ++++I E++ Sbjct: 165 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 218 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 ++ + GHTD P + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 219 DVPGIVRVSGHTDNQPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 277 Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342 +D + NRR++I + + Sbjct: 278 EPLAPNDSDANRALNRRVEISIMQGE 303 >gi|37679056|ref|NP_933665.1| flagellar motor protein MotB [Vibrio vulnificus YJ016] gi|326423687|ref|NP_759314.2| flagellar motor rotation protein motB [Vibrio vulnificus CMCP6] gi|37197798|dbj|BAC93636.1| flagellar motor protein [Vibrio vulnificus YJ016] gi|319999044|gb|AAO08841.2| Flagellar motor rotation protein motB [Vibrio vulnificus CMCP6] Length = 318 Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 61/325 (18%), Positives = 114/325 (35%), Gaps = 31/325 (9%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 D P L W +AD M++LM FF+++ + D K I K Sbjct: 7 KCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------K 55 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 F QN E K I + + ++ + + + Sbjct: 56 FAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRA 115 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 +D K T + + +++ + K ++ L + I Sbjct: 116 GG---------TQRDQGKMTGGQSPETSTQTNQNTEQQQQQQQSEAMSKEMETLMESIKK 166 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L + + E I+I + ++ F + S+ P+ ++++I E++ Sbjct: 167 ALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVKD 220 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 ++ I GHTD + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 221 VPGIVRISGHTDNQRLDSELYRSNWDLSAQRAVSVAQEMEKVRGFSHQRL-RVRGMADTD 279 Query: 320 LKIASDPM--NSANRRIDILVEDRQ 342 + +D + NRR++I + + Sbjct: 280 PLVDNDTEENRARNRRVEISIMQGE 304 >gi|153835783|ref|ZP_01988450.1| PomB [Vibrio harveyi HY01] gi|148867501|gb|EDL66863.1| PomB [Vibrio harveyi HY01] Length = 314 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 D P L W +AD M++LM FF+++ + D K I Sbjct: 5 NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 54 KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGVSDR 113 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 +D K T + N ++ + + + ++ L + I Sbjct: 114 AGG---------TKRDQGKLTGGQSPETSTHNNQSAESDMQQQQSEQTSQEMETLMESIK 164 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + + E I+I + ++ F + S+ P+ ++++I E++ Sbjct: 165 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 218 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 ++ + GHTD P + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 219 DVPGIVRVSGHTDNQPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 277 Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342 +D + NRR++I + + Sbjct: 278 EPLAPNDSDANRALNRRVEISIMQGE 303 >gi|269962340|ref|ZP_06176690.1| flagellar motor protein [Vibrio harveyi 1DA3] gi|269832836|gb|EEZ86945.1| flagellar motor protein [Vibrio harveyi 1DA3] Length = 314 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 D P L W +AD M++LM FF+++ + D K I Sbjct: 5 NKCDCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 54 KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 113 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 +D K T + +N ++ + + + + L + I Sbjct: 114 AGG---------TKRDQGKLTGGQSPETSTQNNQSAESDMQQQQSEQTSQEMDTLMESIK 164 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + + E I+I + ++ F + S+ P+ ++++I E++ Sbjct: 165 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 218 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 ++ + GHTD P + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 219 DVPGIVRVSGHTDNQPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 277 Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342 +D + NRR++I + + Sbjct: 278 EPLAPNDSDANRALNRRVEISIMQGE 303 >gi|209694505|ref|YP_002262433.1| flagellar motor protein MotB [Aliivibrio salmonicida LFI1238] gi|208008456|emb|CAQ78622.1| sodium-driven polar flagellar protein MotB [Aliivibrio salmonicida LFI1238] Length = 309 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 114/322 (35%), Gaps = 36/322 (11%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 P W ++AD T+LM FF+++ + D K I K F Sbjct: 8 KCPPGSPIWMAIFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAF 56 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 QN E K I + + ++ + + + Sbjct: 57 GVQNVLEVKDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDIPQKTLDFHDGESDRAGGS 116 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 + G+ ST ++ + + + Q+L + I L Sbjct: 117 KREAGNLTGGESSSTSTQTN--------------AQSDAESQSQNQSQQELEETIKKALE 162 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 +A+ V E ++I I ++ F S+ P+ ++++IGE++ Sbjct: 163 REIAEGA---VEVENLGQQLVIRIREK---GAFPAGSAFLQPKFRPLIRQIGELVKDVPG 216 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSA-YQVLMKSGVSEDRISKISGFAHHRLKI 322 +I + GHTD P + R NW LS RA S +++L G + DR+ ++ G A Sbjct: 217 IIRVSGHTDNQPLESELYRSNWDLSAQRAVSVGHEMLRVKGFNSDRL-RVRGMASTEPLG 275 Query: 323 ASDPM--NSANRRIDILVEDRQ 342 + + NRR++I + + Sbjct: 276 PNKTAAQRARNRRVEISIMQGK 297 >gi|237653884|ref|YP_002890198.1| OmpA/MotB domain protein [Thauera sp. MZ1T] gi|237625131|gb|ACR01821.1| OmpA/MotB domain protein [Thauera sp. MZ1T] Length = 330 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 77/336 (22%), Positives = 135/336 (40%), Gaps = 52/336 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + Q I++K+ + G+WKI YADF+T +MAFFL+MW++ +T + I Y Sbjct: 3 DDTQQPIVVKRIKKGGGGHH-GGAWKIAYADFVTAMMAFFLLMWLLGSTAQGDLEGIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K M +G D + + E +++ ++ G T + Sbjct: 62 FQNPLKLAMQGGEGTGDSSSIIKGG---------GEDLSRKVGQVRRGDTPSTRAINLDA 112 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 S + + I + Sbjct: 113 APARVKSE---------------------------------------AEATAQAIAERRE 133 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + +L + G+ I ++D +N PMF +S+ P Sbjct: 134 RARLIDLKGKLEAVIEANPSLRQFKNQLLIDIVSEGLRIQLVDAQNRPMFTSASAELRPY 193 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 T +L++I L +S+ GHTD++ + NW LS +RA +A + L+ G+ Sbjct: 194 TRELLREIAAALNDVDNRVSMSGHTDSAQYAGGERGFSNWELSSNRANAARRELVAGGLE 253 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ ++ G A DP++ ANRRI I+V +R Sbjct: 254 AGKMLRVVGLADTAHLNPGDPLDPANRRISIVVLNR 289 >gi|326319083|ref|YP_004236755.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375919|gb|ADX48188.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 312 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 80/337 (23%), Positives = 133/337 (39%), Gaps = 62/337 (18%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + Q IIIK+ + G+WKI YADF+T +MAFFL+MW++ +T + I Y Sbjct: 3 DKKLQPIIIKRVKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQGIAAY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K M Q + + I ++K ++ ++ + Sbjct: 62 FASPLKVAM---------QGGDGSGNSSSIIPGGGNDLSKVHGQVRRSDSDTATSRRTNI 112 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 N A + Sbjct: 113 EN-------------------------------------------------ARAEQARQD 123 Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + R++ L KI + + + + T G+ I I+D +N PMFD S++ P Sbjct: 124 QMRIKALQAKIDALISENPRLKEFKSQIRIDVTPDGLQIQIVDDQNRPMFDSGSALVKPY 183 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L IS+ GHTDA+P+ N NW LS DRA ++ + L+ +G+ Sbjct: 184 MRDILREIGAALGGVENRISLAGHTDAAPYGNGDRGYSNWELSADRANASRRELVAAGMP 243 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ ++ G A L +P NRRI I V ++ Sbjct: 244 DAKLGRVVGLAASDLLEPENPRAPVNRRITITVLTKE 280 >gi|152985187|ref|YP_001351001.1| flagellar motor protein MotB [Pseudomonas aeruginosa PA7] gi|150960345|gb|ABR82370.1| chemotaxis protein MotB [Pseudomonas aeruginosa PA7] Length = 342 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 55/334 (16%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 +N+Q II+K+ ++ GSWKI +ADF T +MAFFLV+W++++ + KKAI YF Sbjct: 2 DNNQPIIVKRVKRYA-AGHHGGSWKIAFADFATAMMAFFLVLWLLSSATPEQKKAISGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +AS + D T K + + Q E+ Sbjct: 61 QDPIGFSESASPYVIDLGG------------------TPTPAPDKTLNPQVQAQPDSNES 102 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 I + Q ++ ++R+ Sbjct: 103 RISPEQDHQ-----------------------------------VNADQAESLAEQVERE 127 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + L + + + + + FE TR G+ I I+D N PMFD S+ P Sbjct: 128 RLALLLQELQNKVDENPMLKDFKDQIHFEITRDGLRIQIVDAANRPMFDLGSARLQPYFE 187 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + E + ISI GHTDA P+ NW LS +RA +A + L+ G E + Sbjct: 188 DILLAMAETIRQVPNKISISGHTDAKPYAGNGDFGNWELSANRANAARRALVAGGYPETQ 247 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 IS++ G+A RL DP+N NRRIDI+V R+ Sbjct: 248 ISQVVGYASARLFDDKDPLNPVNRRIDIVVLTRK 281 >gi|312884943|ref|ZP_07744633.1| flagellar motor protein MotB [Vibrio caribbenthicus ATCC BAA-2122] gi|309367420|gb|EFP94982.1| flagellar motor protein MotB [Vibrio caribbenthicus ATCC BAA-2122] Length = 328 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 109/321 (33%), Gaps = 19/321 (5%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 P L W +AD M++LM FF+++ + D K I K F Sbjct: 10 PPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 58 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 QN E K I + ++ + + + Sbjct: 59 VQNRLEVKDIPKGTSVIAMEFRPGRPEPTPIDVIMQQTIDITQQTVEFHEGESDRAGGMQ 118 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 G+ ST+ + + + +E ++ + + L + Sbjct: 119 RDQGKETGGQSTETSTETSQEADSQSQEEQQQQQQESQEQQQQSESSEQLETVAENIKQA 178 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + E I I I R F + S+ P+ ++++I E++ V Sbjct: 179 LEREIEQGAMEVENLGQQIDIRI---RERGAFPEGSAFLQPKFRPLVRQIAELVKDIPGV 235 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323 + + GHTD P + R NW LS RA S Q + K G DR+ ++ G A Sbjct: 236 VRVSGHTDNQPIDSELYRSNWDLSAQRAVSVAQEMEKVRGFKHDRL-RVRGMADTEPLGP 294 Query: 324 SDPM--NSANRRIDILVEDRQ 342 + + NRR++I + + Sbjct: 295 NKTEAQRALNRRVEISIMQGK 315 >gi|269103244|ref|ZP_06155941.1| Flagellar motor rotation protein MotB [Photobacterium damselae subsp. damselae CIP 102761] gi|268163142|gb|EEZ41638.1| Flagellar motor rotation protein MotB [Photobacterium damselae subsp. damselae CIP 102761] Length = 314 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 107/318 (33%), Gaps = 39/318 (12%) Query: 29 NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88 +W +AD T+LM FF+++ + D K I K F QN Sbjct: 11 GAPAWMATFADLATLLMCFFVLLLSFSEMDVMKFKQIAGSM-----------KNAFGVQN 59 Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 + + K I + + ++ + + + Sbjct: 60 LLDINDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRTLDFHEGESDKAGGTERSA 119 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 G ++++ L+ L K ++ + + Sbjct: 120 GTLTGG-----------------QADKKNKTQQQDQDQNASDSLKQLEKVLNKAIEREIE 162 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268 + V E ++I I +Q F + S+ P+ +++++ ++ + I Sbjct: 163 EG---NVEIENFGQQLVIRIKEQ---GAFPEGSAFLQPKFRPLVRQVASLVKDVPGTVRI 216 Query: 269 RGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP 326 GHTD P + R NW +S RA S Q + K +G + R+ ++ G A ++D Sbjct: 217 SGHTDDRPVESELYRSNWDISAQRAVSVAQEMAKVTGFDQHRM-QVVGLADTAPIASNDT 275 Query: 327 MNS--ANRRIDILVEDRQ 342 NRR++I + + Sbjct: 276 AEGRKRNRRVEISIMQGK 293 >gi|54307286|ref|YP_128306.1| chemotaxis LafU protein [Photobacterium profundum SS9] gi|46911706|emb|CAG18504.1| Hypothetical chemotaxis LafU protein [Photobacterium profundum SS9] Length = 330 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 74/332 (22%), Positives = 121/332 (36%), Gaps = 47/332 (14%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 II+KK+ ++ G+WK+ +ADF +MAFF+V+W++ T + + IEQ Sbjct: 4 EPHIIIVKKRARRHHDEHHGGAWKVAFADFAIAMMAFFMVLWLMGITTQEERIEIEQRLQ 63 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 IF+ N P + + I ++ + T+ +Q + ++ Sbjct: 64 TASIFD-----NIFEITNSPHPIDFDGNASPFENPINSSTNSKRKRDTSVAQQTPQGDDK 118 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 P L+ Sbjct: 119 AS---------------------------------------AGRGPKLNSMLAGKHLSTA 139 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK + L A N ++ E G+ I I D + MF + P Sbjct: 140 QLTILAKGLKEMAEALSASN---NIVLEIVPQGLRILIQDDDDHFMFQRGGIEMTPFFED 196 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L + VL + I GHTD+ PF NW LS RA A QVL+ SG+ I Sbjct: 197 MLYNLAPVLGQIKNRMVISGHTDSIPFHRRDYSNWDLSGSRALKARQVLVDSGLPVANIL 256 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++ A P + NRRI+++V + Sbjct: 257 QVAAMAARMPVNKQYPKSGKNRRIEMMVLTKN 288 >gi|78063638|ref|YP_373546.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383] gi|77971523|gb|ABB12902.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 318 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 75/328 (22%), Positives = 127/328 (38%), Gaps = 64/328 (19%) Query: 15 IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 +++++K D ++ G+WKI YADF+T +MAFFL+MW++ + K+ IE YFN Sbjct: 18 VVVRRKKGEDHDAHHGGAWKIAYADFVTAMMAFFLLMWLLGSVSKYDKQGIEDYFNTPLS 77 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 L++ + ++ G + ++ + Sbjct: 78 TLLSGG----------------------QDAQAPRPSVVQGGGRDMSDPTPAIDTKAQPV 115 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 S + T+ L L + A+ + L+ Sbjct: 116 PASSPAALAGIVDTQ------------------------KLERLKAKLTAAIAQSPSLRA 151 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 +I ++ G+ I I+D PMF SS P +L + Sbjct: 152 YQDQIRIAITNE----------------GLRIEIVDSLKRPMFASGSSQPESYATAILSQ 195 Query: 255 IGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 IG L +SI GHTD++P+ + NW LS DRA +A + L+ G+ ED++ ++ Sbjct: 196 IGTALDDVENRVSIAGHTDSTPYPDGSTGYSNWELSSDRANAARRALVAGGLREDKLLQV 255 Query: 313 SGFAHHRLKIASDPMNSANRRIDILVED 340 G A + NRRI ILV + Sbjct: 256 RGLADVLPLDKNVADEPTNRRISILVMN 283 >gi|295699068|ref|YP_003606961.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] gi|295438281|gb|ADG17450.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] Length = 344 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 79/346 (22%), Positives = 132/346 (38%), Gaps = 65/346 (18%) Query: 1 MNSHGDK--NQENDQFIIIKK-KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57 M + E +I+++ + + ++ G+WKI YADF+T +MAFFL+MW++ +T Sbjct: 1 MRERRSRAAQVEAPAPVIVRRSRKGDEHGAHHGGAWKIAYADFVTAMMAFFLLMWLLGST 60 Query: 58 DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 K+ IE YFN +L+ ++G + + I + TK+ + Sbjct: 61 SKYDKQGIEDYFNTPLSSLLGGNEGTAAARPSVVQGGGRDISDTRPGVGTKSQTEPTP-- 118 Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 ++ + L Sbjct: 119 ------------------------------------------PRAAMPAVTPMDAKRLQQ 136 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 L + +++ L +I T G+ I I+D +N PMF Sbjct: 137 LKAKLSALIEQSSVLNAFKDQIR----------------ISITNEGLRIEIVDSQNRPMF 180 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSA 295 SS P + +L +IG L ISI GHTDA P+ NW LS +RA +A Sbjct: 181 ASGSSKLQPYAVTILTQIGAALNDVDNRISIAGHTDAVPYTAGPEGYSNWELSSERANAA 240 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 + L+ G+ D++ ++ G A + NRRI ILV ++ Sbjct: 241 RRALVAGGMHGDKLLQMRGLADVLPLNSHVADEPTNRRISILVLNK 286 >gi|171057687|ref|YP_001790036.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6] gi|170775132|gb|ACB33271.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6] Length = 320 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 80/337 (23%), Positives = 137/337 (40%), Gaps = 63/337 (18%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 + + Q IIIK+ + G+WKI YADF+T +MAFFL+MW++ +T + K Sbjct: 4 DAKKLQPIIIKRVKKGGH-SAHGGAWKIAYADFVTAMMAFFLLMWLLGSTTEGDK----- 57 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 KGI D P + + + + D + T+ + + + Sbjct: 58 -------------KGIQDFFQSPLKVAMSGGAGAGDATSVIKGGGTDLSQTSGQVKRGEV 104 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + Y + + + Sbjct: 105 PSKKTYNAE------------------------------------------AIKTSQRKA 122 Query: 188 RKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 ++RL+ L +++ ++ + + TR G+ I I+D++N PMFD +S P Sbjct: 123 EQERLETLRQRVQDVMANSPKLAEFKNQIRLDMTRDGLRIQIVDEQNRPMFDSGASEVKP 182 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVS 305 +L+ IG VL +++ GHTDA P NW LS DRA ++ + L+ G+ Sbjct: 183 YMREILRAIGSVLTEVPNRLTLEGHTDAKPMGSGAGYSNWELSSDRANASRRELLAGGLD 242 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + R+ ++ G A DP+N NRRI I+V R+ Sbjct: 243 DARVLRVQGLAASVPFDQQDPLNPINRRISIIVMTRE 279 >gi|254228602|ref|ZP_04922026.1| Flagellar motor protein [Vibrio sp. Ex25] gi|262395023|ref|YP_003286877.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25] gi|151938781|gb|EDN57615.1| Flagellar motor protein [Vibrio sp. Ex25] gi|262338617|gb|ACY52412.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25] Length = 315 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 D P L W +AD M++LM FF+++ + D K I Sbjct: 6 NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 55 KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 K T + +N ++ + + + ++ L + I Sbjct: 115 AGGTKRDEG---------KLTGGQSPETSTQNNQSAEADMQQQQSEEMSQEMETLMESIK 165 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + + E I+I + ++ F + S+ P+ ++++I E++ Sbjct: 166 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 219 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 ++ + GHTD P + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 220 DVPGIVRVSGHTDNRPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 278 Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342 + +D + NRR++I + + Sbjct: 279 EPLLPNDSDENRALNRRVEISIMQGE 304 >gi|124268058|ref|YP_001022062.1| chemotaxis signal transduction protein CheY [Methylibium petroleiphilum PM1] gi|124260833|gb|ABM95827.1| Chemotaxis signal transduction protein CheY [Methylibium petroleiphilum PM1] Length = 320 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 85/338 (25%), Positives = 149/338 (44%), Gaps = 60/338 (17%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 + + Q II+KK + G+WKI YADF+T +MAFFL+MW++ +T + +K I+ Sbjct: 4 DAKKLQPIIVKKIKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTTEGDRKGIQD 62 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YFN K M G D + + + +T+++ +K G +++ L Sbjct: 63 YFNNPIKVSMMGGSGSGDSSSVVKGG---------GQDLTRSTGQVKRGDVEAERKSYTL 113 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + + A Sbjct: 114 Q-----------------------------------------------ALKATRAQQASA 126 Query: 188 RKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + L+ L ++ S L+ + + + F+ T G+ I I+D++N PMF S++ P Sbjct: 127 EAESLKMLKGRVESKLANDPRFNELKAQIRFDMTADGLRIQIVDEQNRPMFATGSAVVQP 186 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGV 304 +L+ IG VLA +++ GHTD + F A NW LS DRA ++ + L+ G+ Sbjct: 187 YMRELLRTIGGVLAEVPNKLTLEGHTDTAAFSAGAGGYSNWELSADRANASRRELIAGGL 246 Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ ++ G A L P+N NRRI I+V +R+ Sbjct: 247 ADEKVLRVQGLAASSLFDREQPLNPVNRRISIIVMNRE 284 >gi|85710173|ref|ZP_01041238.1| flagellar motor component [Erythrobacter sp. NAP1] gi|85688883|gb|EAQ28887.1| flagellar motor component [Erythrobacter sp. NAP1] Length = 319 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 134/332 (40%), Gaps = 58/332 (17%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 II+KK ++ G+WK+ YADF+T +MAFFL++W++ AT+++ ++ I YF P Sbjct: 10 PAPIIVKKVTIAQGDGHHGGAWKVAYADFVTAMMAFFLLLWLLGATEENQRRGIADYFAP 69 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 S G + + + + T + + Sbjct: 70 TLVKTRQQSAGADGMLGGSSLTDVDNYPNAQGQTGTLSITVPRG---------------- 113 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 E L L ++ A+ ++++ Sbjct: 114 -------------------------AEGGPMEGGGDGDIETERLDRLREQIDEALAQRRQ 148 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + LA + V GI I ++D + MF ++I + + Sbjct: 149 ISHLA----------------RQVKVMRAPDGIRIDLVDDADFSMFALGTTILTQDARGL 192 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L+ IGEVL + +RGHTD+ P+R I +NW LS RA + Q L+ SG+ +R + Sbjct: 193 LEVIGEVLEAQRTPLILRGHTDSLPWRDGITANNWSLSAGRAEATRQALIASGLEANRFA 252 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +I G A IA +P + NRRI +L+ ++Q Sbjct: 253 RIEGVADTEPLIADNPADPRNRRISLLLLEQQ 284 >gi|300312289|ref|YP_003776381.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1] gi|300075074|gb|ADJ64473.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1] Length = 312 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 85/337 (25%), Positives = 138/337 (40%), Gaps = 63/337 (18%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 E + II+K+ + G+WKI YADF+T +MAFFL+MW++ +T I +Y Sbjct: 3 DEGLRPIIVKRIKKGGGGHH-GGAWKIAYADFVTAMMAFFLLMWLLGSTAKGDLNGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K M G D + +T+ L+ G T+ + Q L Sbjct: 62 FKTPLKVAMAGGSGSGDANTVLPGG---------GKDLTRQDGQLRKGETDVTARKQNL- 111 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 ++ L Sbjct: 112 -------------------------------------------------KQAQQELEKME 122 Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL++L ++ + S +L + T G+ I I+D++N PMF +S+ P Sbjct: 123 RTRLEELKSRLEKAIDSNPTLKQFKNQLLIDITSEGLRIQIVDEKNRPMFALASAQLQPY 182 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 T +L +IG L IS+ GHTDA+P+ NW LS DRA ++ + L+ G+ Sbjct: 183 TKEILHEIGRTLNDVPNKISLSGHTDATPYSKGEKGYSNWELSADRANASRRELIIGGMD 242 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G + L DP N NRRI I+V +++ Sbjct: 243 ESKVLRVVGLSSAVLLDKEDPFNPINRRISIIVMNKK 279 >gi|162147455|ref|YP_001601916.1| chemotaxis protein motB (motility protein B) [Gluconacetobacter diazotrophicus PAl 5] gi|209545564|ref|YP_002277793.1| OmpA/MotB domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|161786032|emb|CAP55614.1| putative chemotaxis protein motB (Motility protein B) [Gluconacetobacter diazotrophicus PAl 5] gi|209533241|gb|ACI53178.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 368 Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 86/340 (25%), Positives = 143/340 (42%), Gaps = 15/340 (4%) Query: 7 KNQENDQFIIIKKK--VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 KN Q I+I++ ++ ++ G+WKI YADFMT +M+FFLVMW++NAT D+ ++ Sbjct: 3 KNDNKQQPILIRRSDGEDSEEGGHSGGAWKIAYADFMTAMMSFFLVMWLLNATTDEQRRG 62 Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 I Q+FNP A P I T + V + Sbjct: 63 IAQFFNPMADRDTHAQPTDSMLDVQPSPLWGGSAIRRIKNGDTLDPVQDGAPGARNAPRT 122 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 R + + ++ ++ + G + + + + + Sbjct: 123 VRQDRSSDDITLGLRTRLNPSPPAIVPIGGPQTGAARSVGYIGAGSPAEASAEEAAVEQM 182 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 A ++ +QD + V + R I I + D NTPMFD S+ P Sbjct: 183 ASGLRQAIQD----------NPEIRDAASDVSIQIGRDDIRIELRDSNNTPMFDSGSATP 232 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR---DNWRLSLDRAYSAYQVLMK 301 +L +I LA E ISI G+TD +P+ + NW LS+ RA A + L++ Sbjct: 233 NRLGKQMLAQIAAWLAPMPEPISIVGYTDGAPYHVGRQWGMSNWTLSVMRADHARETLVQ 292 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +G + I +SG + L + SDP + NRR+ +++ R Sbjct: 293 AGYPDRNILDVSGRSDRDLALPSDPSGAGNRRVVLIMHRR 332 >gi|85711188|ref|ZP_01042248.1| flagellar motor protein [Idiomarina baltica OS145] gi|85695101|gb|EAQ33039.1| flagellar motor protein [Idiomarina baltica OS145] Length = 309 Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 104/321 (32%), Gaps = 39/321 (12%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 P L W +AD MT+LM FF+++ + D K I K Sbjct: 13 PPPGLPMWMATFADLMTLLMCFFVLLLAFSEMDVLKFKQIAGSM-----------KYALG 61 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 QN E K I + + T Q++ + + + + K Sbjct: 62 VQNKIEVKDIPKGTSIIAQEFRPGRPEPTPIETIQQQTVEMTQQTLEFQDGESDFAGGKQ 121 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + K + Q + + + Sbjct: 122 VERGG--------------------QQADSEEDKKAVDGSESDPAVEQQVKELMERIREQ 161 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + E I+I I + F + S+ P+ V++++ + L Sbjct: 162 LSDNIKAGSLELEQLGQQIIIRIKEN---GSFPEGSAFLQPQFKPVIREVAQALKDIPGE 218 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323 I+I GHTD P + W LS RA + + + G + R+ + G+A + + Sbjct: 219 ITISGHTDNQPLVSEMYTSKWDLSAKRAVAVAEEMTSVDGFDQSRLVTM-GYADTKPIVP 277 Query: 324 SD--PMNSANRRIDILVEDRQ 342 ++ + NRR+DI + + Sbjct: 278 NNSTSNRALNRRVDIAIMQGK 298 >gi|326386939|ref|ZP_08208553.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370] gi|326208619|gb|EGD59422.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370] Length = 277 Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 76/326 (23%), Positives = 129/326 (39%), Gaps = 62/326 (19%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 II KK+ + ++ G+WK+ YADF+T +MAFFL+MW++ AT + +K I YF P Sbjct: 13 IIVKKITVVAAGHHGGAWKVAYADFVTAMMAFFLLMWLLGATTERQRKGIADYFTPTLVK 72 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 S G + + + + TK + + K Sbjct: 73 TRQGSAGSYGLLGGSSLTDADTYQFRAGQTGTKTLTIPRDATGGAKDGGS---------- 122 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + L + ++ ++L+ L Sbjct: 123 -----------------------------------KAKRTAALQERLKQKLQASEQLRQL 147 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 AK V T GI + ++D N MF ++I P+ + +++ I Sbjct: 148 AK----------------QVHLTMTPDGIRLDLLDDANFSMFRLGTTILTPQAVELIRAI 191 Query: 256 GEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + +A +++RGHTD+ ++ +NW LS RA + Q L++ GV E R +I G Sbjct: 192 AQSIAPDQNGLTVRGHTDSLQWKPGDPANNWSLSAGRAEATRQALLRFGVPEKRFRRIEG 251 Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340 A I +P + NRR+ IL+ D Sbjct: 252 VADQEPLITDNPADPRNRRMSILLMD 277 >gi|167626173|ref|YP_001676467.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167356195|gb|ABZ78808.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4] Length = 336 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 126/331 (38%), Gaps = 44/331 (13%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++I++K + G+WK+ +ADF +MA F+V+WI+ D + I QY N Sbjct: 4 RPEPVVIRRKKRSKAKAGHGGAWKVAFADFTLAMMALFMVLWIMQIADQQERTMIVQYLN 63 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 G S F+ P Sbjct: 64 --GDLHDDGSINPFNLGGAPS--------------------------------------- 82 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 +F + + + + + + P L+ + + Sbjct: 83 MFDFQGNIAIQQAVLPAAATGVERSGPAMHNRIPQGTENAKAGRGPELNSLVPGKFETQA 142 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L+ LAK+I + + + V + G+ I + D N MF + S+ P Sbjct: 143 QLEFLAKEIDKVIENVS---MSANVELQVVPQGVRILMHDNVNQFMFTRGSADMKPYFED 199 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L +G +L+ I+I GHTD+SP+ NW LS RA A +VL G+ ++ Sbjct: 200 LLMALGPLLSQVENKITISGHTDSSPYAGKKFTNWELSSKRALLARRVLEYGGLRRHQVI 259 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +++G A + DP +ANRRI++LV Sbjct: 260 QVTGMADQAPYVIKDPAAAANRRIEVLVMTS 290 >gi|15600146|ref|NP_253640.1| flagellar motor protein MotB [Pseudomonas aeruginosa PAO1] gi|107104052|ref|ZP_01367970.1| hypothetical protein PaerPA_01005125 [Pseudomonas aeruginosa PACS2] gi|116053102|ref|YP_793421.1| flagellar motor protein MotB [Pseudomonas aeruginosa UCBPP-PA14] gi|218894048|ref|YP_002442917.1| flagellar motor protein MotB [Pseudomonas aeruginosa LESB58] gi|254238332|ref|ZP_04931655.1| chemotaxis protein MotB [Pseudomonas aeruginosa C3719] gi|254244159|ref|ZP_04937481.1| chemotaxis protein MotB [Pseudomonas aeruginosa 2192] gi|313109955|ref|ZP_07795882.1| chemotaxis protein MotB [Pseudomonas aeruginosa 39016] gi|9951234|gb|AAG08338.1|AE004908_4 chemotaxis protein MotB [Pseudomonas aeruginosa PAO1] gi|115588323|gb|ABJ14338.1| chemotaxis protein MotB [Pseudomonas aeruginosa UCBPP-PA14] gi|126170263|gb|EAZ55774.1| chemotaxis protein MotB [Pseudomonas aeruginosa C3719] gi|126197537|gb|EAZ61600.1| chemotaxis protein MotB [Pseudomonas aeruginosa 2192] gi|218774276|emb|CAW30093.1| chemotaxis protein MotB [Pseudomonas aeruginosa LESB58] gi|310882384|gb|EFQ40978.1| chemotaxis protein MotB [Pseudomonas aeruginosa 39016] Length = 347 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 90/334 (26%), Positives = 140/334 (41%), Gaps = 55/334 (16%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 +N+Q II+K+ ++ GSWKI +ADF T +MAFFLV+W++++ + KKAI YF Sbjct: 2 DNNQPIIVKRVKRYA-AGHHGGSWKIAFADFATAMMAFFLVLWLLSSATPEQKKAISGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +AS + D T K + + Q E+ Sbjct: 61 QDPIGFSESASPYVIDLGG------------------TPTPAPDKTLNPQVQAQPDSNES 102 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 I + Q ++ ++R+ Sbjct: 103 RISPEQDHQ-----------------------------------VNADQAENLAEQVERE 127 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + L + + + + + FE TR G+ I I+D N PMFD S+ P Sbjct: 128 RLALLLQELQNKVDENPMLKDFKDQIHFEITRDGLRIQIVDAANRPMFDLGSARLQPYFE 187 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + E + ISI GHTDA P+ NW LS +RA +A + L+ G E + Sbjct: 188 DILLAMAETIRQVPNKISISGHTDAKPYAGNGDFGNWELSANRANAARRALVAGGYPEGQ 247 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 I+++ G+A RL DP+N NRRIDI+V R+ Sbjct: 248 IAQVVGYASARLFDDKDPLNPVNRRIDIVVLTRK 281 >gi|163749515|ref|ZP_02156763.1| flagellar motor protein [Shewanella benthica KT99] gi|161330924|gb|EDQ01851.1| flagellar motor protein [Shewanella benthica KT99] Length = 304 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 62/313 (19%), Positives = 117/313 (37%), Gaps = 24/313 (7%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 +AD M++LM FF+++ + D K I K F QN E Sbjct: 1 MATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSM-----------KYAFGVQNKVEVK 49 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 K I + ++ + E + Y + S + Sbjct: 50 DIPKGTSVIALEFRPGRPEPTPIEIINQQTNEMTEPTLEYQAGDDDSSGGVQQQRGEQRG 109 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 G+ + + + K E+ +E ++ + D KK++ L+ + D Sbjct: 110 GEASATAQEQ--AEAKAESVSQARAEEESKAQAAAQENINDQVKKMAQELNKEIVDGA-- 165 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 + E+ I+I I ++ F S P V++++GE+L ++++ G TD Sbjct: 166 -IEIESLGQQIIIRIREK---GAFSSGSGFLQPRFKPVIRRVGELLRDIPGIVTVSGFTD 221 Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NS 329 N NW LS RA + L+K G ++R+ + G A+ + +D + Sbjct: 222 DMNISNELYSSNWDLSSKRAVAVAHELIKVRGFDQNRMK-VVGMANTNPLVDNDSASNRA 280 Query: 330 ANRRIDILVEDRQ 342 NRR++I +E + Sbjct: 281 RNRRVEIAIEQGK 293 >gi|84394351|ref|ZP_00993072.1| flagellar motor protein [Vibrio splendidus 12B01] gi|84375010|gb|EAP91936.1| flagellar motor protein [Vibrio splendidus 12B01] Length = 315 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 111/321 (34%), Gaps = 31/321 (9%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 P L W +AD M++LM FF+++ + D K I K F Sbjct: 10 PPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 58 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 QN E K I + + ++ + + + + Sbjct: 59 VQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESERAGGTM 118 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 GK ST + +++ A + + ++ L + I L Sbjct: 119 RDQGKMTGGKSPEVSTH---------DNQNSESDQQQQQAEAQSQEMETLMESIKKALER 169 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + + E I+I I ++ F S+ P+ +++++ E++ + Sbjct: 170 EIDQGA---IEVENLGQQIVIRIREK---GAFPSGSAFLQPKFRPLVRQVAELVKDVPGI 223 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323 + I GHTD + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 224 VRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADTEPVEP 282 Query: 324 SDPMNSA--NRRIDILVEDRQ 342 +D NRR++I + + Sbjct: 283 NDTEWQRSLNRRVEISIMQGE 303 >gi|91794978|ref|YP_564629.1| OmpA/MotB [Shewanella denitrificans OS217] gi|91716980|gb|ABE56906.1| OmpA/MotB [Shewanella denitrificans OS217] Length = 330 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 70/332 (21%), Positives = 126/332 (37%), Gaps = 44/332 (13%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 ++ IIIK+ + ++ G+WK+ +ADF +MA F+V+WI+ D D + I QY Sbjct: 3 HKNEPIIIKRGRRSKRSASHGGAWKVAFADFTLAMMALFMVLWIMQIADQDERSQIVQYL 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 NP + + + I + ++ GS ++ N Sbjct: 63 R--------GEMYASGAMNPFDVAQSSSIIDFEGSPAIQQAIITSAGSGPERAGPAMHNN 114 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + + + + Sbjct: 115 IPAGEEEPNAGQGPEFNAMVPGQY---------------------------------DTQ 141 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +L LA++++ + + + GI I I D + MF + S+ Sbjct: 142 AQLVMLARQLNHVVQQSS---MADNIAVTLVPQGIRILIHDNIDRFMFTRGSAQMQVYFE 198 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L +G VL T + I GHTD++P+ NW LS RA A +VL GV +++ Sbjct: 199 DLLLALGPVLGQVTNAMVISGHTDSTPYVGTEFTNWELSSKRALLARRVLEFGGVKRNQV 258 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +++G A I +P +ANRRI++L+ Sbjct: 259 IQVTGMADQVAYIPQEPAAAANRRIEVLILTS 290 >gi|83648502|ref|YP_436937.1| flagellar motor protein MotB [Hahella chejuensis KCTC 2396] gi|83636545|gb|ABC32512.1| Flagellar motor protein [Hahella chejuensis KCTC 2396] Length = 326 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 69/321 (21%), Positives = 114/321 (35%), Gaps = 45/321 (14%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 + P L +W +AD M++LM FF+++ + D K + F Sbjct: 10 ECPPGLPAWMATFADLMSLLMCFFVLLLSFSEMDALKFKRLAGSMREA-----------F 58 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 Q S K I + + D T ++ L N + Sbjct: 59 GVQAIVNVDSIPKGTSIIAQEFSPGKPDPTPLQTIMQQTEMDLPNLEQLCEQQVADALQE 118 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 E+ D+ L K K+L + + LA + S + Sbjct: 119 ECPKVQGEELSDIV-------------------LEKIKMLVEETENDAITLASALESEVR 159 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 V ET I+I + ++ F S+ PE V+ K+ E+L Sbjct: 160 N-------NQVEVETRGRKIVIRVQEK---GSFSSGSADLNPEFYPVIDKLVELLKSMEG 209 Query: 265 VISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 IS+ GH+D+ P R R NW LS RA L +SG + R I+G+A + Sbjct: 210 SISVEGHSDSIPIRTARFRSNWDLSAARALEVAHALFESGELEPSRF-SIAGYADTKPLA 268 Query: 323 ASDPM--NSANRRIDILVEDR 341 +D + NRR++I+++ Sbjct: 269 PNDSAENRARNRRVEIILQQP 289 >gi|28897464|ref|NP_797069.1| flagellar motor protein MotB [Vibrio parahaemolyticus RIMD 2210633] gi|153840267|ref|ZP_01992934.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810] gi|260876424|ref|ZP_05888779.1| flagellar motor protein MotB [Vibrio parahaemolyticus AN-5034] gi|28805676|dbj|BAC58953.1| sodium-driven polar flagellar protein MotB [Vibrio parahaemolyticus RIMD 2210633] gi|149746069|gb|EDM57199.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810] gi|308092849|gb|EFO42544.1| flagellar motor protein MotB [Vibrio parahaemolyticus AN-5034] gi|328472526|gb|EGF43389.1| flagellar motor protein MotB [Vibrio parahaemolyticus 10329] Length = 315 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 114/326 (34%), Gaps = 31/326 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 D P L W +AD M++LM FF+++ + D K I Sbjct: 6 NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 55 KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 G+ ST +S ++ + + + ++ L + I Sbjct: 115 AGGTKRDEGKLTGGQSPETSTQSNQS---------AESDMQQQQSEEMSQEMETLMESIK 165 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + + E I+I + ++ F + S+ P+ ++++I E++ Sbjct: 166 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 219 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 ++ I GHTD + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 220 DVPGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 278 Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342 + +D + NRR++I + + Sbjct: 279 EPLVPNDSDENRALNRRVEISIMQGE 304 >gi|148976605|ref|ZP_01813292.1| flagellar motor protein MotB [Vibrionales bacterium SWAT-3] gi|145963956|gb|EDK29214.1| flagellar motor protein MotB [Vibrionales bacterium SWAT-3] Length = 315 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 111/324 (34%), Gaps = 31/324 (9%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 P L W +AD M++LM FF+++ + D K I K Sbjct: 7 CKCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KF 55 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 F QN E K I + + ++ + + + + Sbjct: 56 AFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESERAG 115 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 GK ST + +++ A + + ++ L + I Sbjct: 116 GTMRDQGKMTGGKSPEVSTH---------DNQNSESDQQQQQAEAQSQEMETLMESIKKA 166 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L + + E I+I I ++ F S+ P+ +++++ E++ Sbjct: 167 LEREIDQGA---IEVENLGQQIVIRIREK---GAFPSGSAFLQPKFRPLVRQVAELVKDV 220 Query: 263 TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320 ++ I GHTD + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 221 PGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADTEP 279 Query: 321 KIASDPMNSA--NRRIDILVEDRQ 342 +D NRR++I + + Sbjct: 280 VEPNDTEWQRSLNRRVEISIMQGE 303 >gi|86147426|ref|ZP_01065738.1| flagellar motor protein [Vibrio sp. MED222] gi|85834719|gb|EAQ52865.1| flagellar motor protein [Vibrio sp. MED222] Length = 315 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 109/324 (33%), Gaps = 31/324 (9%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 P L W +AD M++LM FF+++ + D K I K Sbjct: 7 CKCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KF 55 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 F QN E K I + + ++ + + + + Sbjct: 56 AFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESERAG 115 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 GK S ++ ++ ++ ++ L + I Sbjct: 116 GTMRDQGKMTGGKSAEVSAHNNQNSESDQQQQQAQEQSQE---------METLMESIKKA 166 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L + + E I+I I ++ F S+ P+ +++++ E++ Sbjct: 167 LEREIDQGA---IEVENLGQQIVIRIREK---GAFPSGSAFLQPKFRPLVRQVAELVKDV 220 Query: 263 TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320 ++ I GHTD + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 221 PGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADTEP 279 Query: 321 KIASDPMNSA--NRRIDILVEDRQ 342 +D NRR++I + + Sbjct: 280 VEPNDTEWQRSLNRRVEISIMQGE 303 >gi|261252277|ref|ZP_05944850.1| Flagellar motor rotation protein MotB [Vibrio orientalis CIP 102891] gi|260935668|gb|EEX91657.1| Flagellar motor rotation protein MotB [Vibrio orientalis CIP 102891] Length = 313 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 112/321 (34%), Gaps = 31/321 (9%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 P L W +AD M++LM FF+++ + D K I K F Sbjct: 9 PPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 57 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 QN E K I + + ++ + + + Sbjct: 58 VQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGG-- 115 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 +D K T + +N ++ + + + L+ L + I L Sbjct: 116 -------TQRDQGKLTGGQSPDTSTQNNQNSESDSQQQQSAEMSQELETLMESIKKALER 168 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + + E I I I ++ F + S+ P+ ++++I +++ Sbjct: 169 EIEQGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVKDVPGR 222 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323 I + GHTD + R NW LS RA S Q + K G + +R+ ++ G A Sbjct: 223 IRVSGHTDNQRIDSELYRSNWDLSAQRAVSVAQEMEKVRGFNHERL-RVRGMADTEPLGP 281 Query: 324 SDPM--NSANRRIDILVEDRQ 342 +D S NRR++I + + Sbjct: 282 NDTEAQRSRNRRVEISIMQGE 302 >gi|152995178|ref|YP_001340013.1| flagellar motor protein MotB [Marinomonas sp. MWYL1] gi|150836102|gb|ABR70078.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1] Length = 330 Score = 179 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 69/323 (21%), Positives = 122/323 (37%), Gaps = 41/323 (12%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 + L ++ +AD M++LM FF+++ D K + K Sbjct: 8 DCPECVEGLPAYMGTFADLMSLLMCFFVLLLSFAEMDVLKFKQLAGSL-----------K 56 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 F Q E S I + + + + ++K EN + + +E Sbjct: 57 VAFGVQREVEADSIPMGTSVIAQEFSPGRPEPTPINEVKQKADSTPENTLEVICKPGDAE 116 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + S + + K SK + K+ + + A+ I+S Sbjct: 117 LKEQSNSGSPAPVTFVDK-------------------SKADLDKEKKIQETESNAQMIAS 157 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + V+ V ET I I I DQ F+ S+ + I V+ I +VL Sbjct: 158 VMREEVSKG---TVEIETQEQTITIRIKDQ---GSFESGSAELNYDFIPVIDLIRDVLVG 211 Query: 262 STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHR 319 IS+ GHTD P + NW+LS RA S + L +G + + R ++G+A R Sbjct: 212 IQGTISVEGHTDNVPIASSRFRSNWQLSSARAISVAEELFSTGQLDQGRF-AVTGYADTR 270 Query: 320 LKIASDPM--NSANRRIDILVED 340 + +D + NRR++I+++ Sbjct: 271 PLVPNDTPAHRATNRRVEIIIKQ 293 >gi|197105150|ref|YP_002130527.1| chemotaxis MotB protein [Phenylobacterium zucineum HLK1] gi|196478570|gb|ACG78098.1| chemotaxis MotB protein [Phenylobacterium zucineum HLK1] Length = 301 Score = 179 bits (452), Expect = 8e-43, Method: Composition-based stats. Identities = 85/330 (25%), Positives = 141/330 (42%), Gaps = 45/330 (13%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 DQ I+IKK ++ G+WK+ YADF+T +MAFFL+MW+IN T + K+ I YF P Sbjct: 5 DQPIVIKKVKKGGGHGHHGGAWKVAYADFVTAMMAFFLLMWLINTTSPEQKQGIADYFAP 64 Query: 72 FGKNLMTASKG-IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + ++ G I S++ I E + +S + G + LE Sbjct: 65 ASVSQTSSGAGGILGGTALGTDGSKSAGASPIIEELAPDSRNPNDGKNRDASKSDSLE-- 122 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + L ++ K E ++ +++ Sbjct: 123 --------------------------AASTQALRDALQKREEAAFASAAQSLRQSLQDMP 156 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L +L+K I + + T G+ I ++DQ MF+ SS P + Sbjct: 157 ELAELSKNI----------------IIDQTPEGLRIQLVDQEGRSMFNAGSSQPNDRAKL 200 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L+ + +V+ +SI GHT A+ + A +W LS RA ++ ++L SGV DR+ Sbjct: 201 LLRAVSKVINQLPNRVSIYGHTSANANGSRAESDWPLSAARADASRRILQGSGVDPDRVY 260 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVED 340 ++SG A DP + NRRI I++ Sbjct: 261 QVSGKAASEPLYPDDPTLAGNRRIAIVLLR 290 >gi|218710365|ref|YP_002417986.1| flagellar motor protein MotB [Vibrio splendidus LGP32] gi|218323384|emb|CAV19561.1| Flagellar motor protein [Vibrio splendidus LGP32] Length = 315 Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 109/324 (33%), Gaps = 31/324 (9%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 P L W +AD M++LM FF+++ + D K I K Sbjct: 7 CKCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KF 55 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 F QN E K I + + ++ + + + + Sbjct: 56 AFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESERAG 115 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 GK S ++ ++ ++ ++ L + I Sbjct: 116 GTMRDQGKMTGGKSAEVSAHNNQNSESDQQQQQAQEQSQE---------METLMESIKKA 166 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L + + E I+I I ++ F S+ P+ +++++ E++ Sbjct: 167 LEREIDQGA---IEVENLGQQIVIRIREK---GAFPSGSAFLQPKFRPLVRQVAELVKDV 220 Query: 263 TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320 ++ I GHTD + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 221 PGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADTEP 279 Query: 321 KIASDPMNSA--NRRIDILVEDRQ 342 +D NRR++I + + Sbjct: 280 VEPNDTEWQRSLNRRVEISIMQGE 303 >gi|264676590|ref|YP_003276496.1| OmpA/MotB [Comamonas testosteroni CNB-2] gi|262207102|gb|ACY31200.1| OmpA/MotB [Comamonas testosteroni CNB-2] Length = 355 Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats. Identities = 80/336 (23%), Positives = 137/336 (40%), Gaps = 60/336 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + Q IIIK+ ++ G+WKI YADF+T +MAFFL+MW++ +T + I Y Sbjct: 3 DKKLQPIIIKRVKKTAHA-HHGGAWKIAYADFVTAMMAFFLLMWLLGSTAQGELQGIAAY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K M+ G + + Sbjct: 62 FNSPLKVAMSGGSGAGNSSSIVPGGG---------------------------------- 87 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 N H + + + + + L L + + Sbjct: 88 -------NDLSKVHGQVRRSESEDNANRRSSQAMGRADESARDAQRLHALKAKVDSMIAN 140 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL + +I + + T G++I I+D +N PMFD S++ P Sbjct: 141 NARLNEFRSQIRTEI----------------THDGLMIQIVDDQNRPMFDSGSAVVKPYM 184 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L++IG + ++ IS+ GHTDA+P+ N NW LS DRA ++ + L+ +G+ Sbjct: 185 RDILREIGAAMGNAENRISLSGHTDAAPYGNADRGYSNWELSADRANASRRELVAAGMPL 244 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 D+++++ G A L + +P + NRRI I V ++ Sbjct: 245 DKLARVVGMASSDLLLPEEPRAAQNRRITITVLTKE 280 >gi|296391793|ref|ZP_06881268.1| flagellar motor protein MotB [Pseudomonas aeruginosa PAb1] Length = 347 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 90/334 (26%), Positives = 140/334 (41%), Gaps = 55/334 (16%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 +N+Q II+K+ ++ GSWKI +ADF T +MAFFLV+W++++ + KKAI YF Sbjct: 2 DNNQPIIVKRVKRYA-AGHHGGSWKIAFADFATAMMAFFLVLWLLSSATPEQKKAISGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +AS + D T K + + Q E+ Sbjct: 61 QDPIGFSESASPYVIDLGG------------------TPTPAPDKTLNPQVQAQPDSNES 102 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 I + Q ++ ++R+ Sbjct: 103 RISPEQDHQ-----------------------------------VNADQAENLAEQVERE 127 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + L + + + + + FE TR G+ I I+D N PMFD S+ P Sbjct: 128 RLALLLQELQNKVDENPMLKDFKDQIHFEITRDGLRIQIVDAANRPMFDLGSARLQPYFE 187 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + E + ISI GHTDA P+ NW LS +RA +A + L+ G E + Sbjct: 188 DILLAMAETIRQVPNKISISGHTDAKPYAGNGDFGNWELSANRANAARRALVAGGYPEGQ 247 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 I+++ G+A RL DP+N NRRIDI+V R+ Sbjct: 248 IAQVVGYASARLFDDKDPLNPVNRRIDIVVLTRK 281 >gi|323498631|ref|ZP_08103623.1| flagellar motor protein MotB [Vibrio sinaloensis DSM 21326] gi|323316329|gb|EGA69348.1| flagellar motor protein MotB [Vibrio sinaloensis DSM 21326] Length = 314 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 61/318 (19%), Positives = 111/318 (34%), Gaps = 31/318 (9%) Query: 29 NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88 L W +AD M++LM FF+++ + D K I K F QN Sbjct: 12 GLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQN 60 Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 E K I + + ++ + + + Sbjct: 61 RLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGG----- 115 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 +D K T + +N ++ + + + L+ L + I L + Sbjct: 116 ----TQRDQGKLTGGQSPDTSTQNNQNSESDSQQQQSAEMSQELETLMESIKKALEREIE 171 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268 + E I I I ++ F + S+ P+ ++++I E++ +I + Sbjct: 172 QGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIAELVKDIPGIIRV 225 Query: 269 RGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP 326 GHTD + R NW LS RA S Q + K G + R+ ++ G A +D Sbjct: 226 SGHTDNQRIESELYRSNWDLSAQRAVSVAQEMEKVRGFTPQRL-RVRGMADTEPLGPNDT 284 Query: 327 M--NSANRRIDILVEDRQ 342 S NRR++I + + Sbjct: 285 EAQRSRNRRVEISIMQGE 302 >gi|238026965|ref|YP_002911196.1| OmpA/MotB [Burkholderia glumae BGR1] gi|237876159|gb|ACR28492.1| OmpA/MotB [Burkholderia glumae BGR1] Length = 312 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 80/330 (24%), Positives = 123/330 (37%), Gaps = 64/330 (19%) Query: 15 IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 II+++ ++ G+WKI YADF+T +MAFFL+MW++ +T ++ IE YFN Sbjct: 19 IIVRRVKRDAHEGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKYERQGIESYFNTPLS 78 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 L+ S+ + D G+ N +Q Sbjct: 79 ALLGG-----------SADGSGTARSSVINGGGHDLSDTHGGNGNATQQAAP-------- 119 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +PP S K++L Sbjct: 120 -------------------------------------ARSVPPDSANDARLALLKQQLTA 142 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L + TTR G+ I I+D R+ PMF SS +L + Sbjct: 143 LVD------ENPKLKAFKNQIRLSTTREGLRIEIVDSRSRPMFATGSSRLEDYAYDILFQ 196 Query: 255 IGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 IG VL +S+ GHTDA P+ NW LS +RA +A + L+ + ED++ ++ Sbjct: 197 IGGVLNQVDNRVSLAGHTDAVPYSGGIAGYSNWELSSERANAARRALVAGHLREDKLLQV 256 Query: 313 SGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 G A NRRI ILV +++ Sbjct: 257 RGLADVLPFDRGVADAEVNRRISILVLNKE 286 >gi|299531265|ref|ZP_07044675.1| OmpA/MotB [Comamonas testosteroni S44] gi|298720672|gb|EFI61619.1| OmpA/MotB [Comamonas testosteroni S44] Length = 355 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 80/336 (23%), Positives = 137/336 (40%), Gaps = 60/336 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + Q IIIK+ ++ G+WKI YADF+T +MAFFL+MW++ +T + I Y Sbjct: 3 DKKLQPIIIKRVKKTAHA-HHGGAWKIAYADFVTAMMAFFLLMWLLGSTAQGELQGIAAY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K M+ G + + Sbjct: 62 FNSPLKVAMSGGSGAGNSSSIVPGGG---------------------------------- 87 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 N H + + + + + L L + + Sbjct: 88 -------NDLSKVHGQVRRSESEDNANRRSSQAMGRADESARDAQRLHALKAKVDSMIAN 140 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL + +I + + T G++I I+D +N PMFD S++ P Sbjct: 141 NARLNEFRSQIRTEI----------------THDGLMIQIVDDQNRPMFDSGSAVVKPYM 184 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L++IG + ++ IS+ GHTDA+P+ N NW LS DRA ++ + L+ +G+ Sbjct: 185 RDILREIGAAMGNAENRISLSGHTDAAPYGNADRGYSNWELSADRANASRRELVAAGMPL 244 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 D+++++ G A L + +P + NRRI I V ++ Sbjct: 245 DKLARVVGMASSDLLLPEEPRAAQNRRITITVLTKE 280 >gi|326794296|ref|YP_004312116.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] gi|326545060|gb|ADZ90280.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] Length = 334 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 63/323 (19%), Positives = 116/323 (35%), Gaps = 39/323 (12%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + L ++ +AD M++LM FF+++ D K + Sbjct: 7 QDCPECIEGLPAYMGTFADLMSLLMCFFVLLLSFAEMDVLKFKQLAGSMREA-------- 58 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 F Q E S I + + + + ++K R EN + L + Sbjct: 59 ---FGVQKQIEAQSIPMGTSIIAQEFSPGRPEPTPINEVRQKADDRPENTLEVLCKPDTA 115 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 E + + KS ++R+K++Q + Sbjct: 116 ELNEQEGAGQPSPSTFVDKSK----------------------ADLEREKQIQQTEEDAQ 153 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 S + + V ET I I + D+ F+ S+ + I V+ + EVL Sbjct: 154 QISSVMKEEISKGTVEVETQEQTITIRLKDK---GSFESGSAELNFDFIPVIDMVREVLI 210 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 IS+ GHTD P + NW+LS R+ + + L +G + ++GFA R Sbjct: 211 GVKGNISVEGHTDNIPIESRRFQSNWQLSSARSIAVAEELFATGALDQNRFSVTGFADTR 270 Query: 320 LKIASDP--MNSANRRIDILVED 340 + +D + NRR++I+++ Sbjct: 271 PLVPNDTSANRATNRRVEIVIKQ 293 >gi|163744356|ref|ZP_02151716.1| outer membrane porin, OmpA/MotB family protein [Oceanibulbus indolifex HEL-45] gi|161381174|gb|EDQ05583.1| outer membrane porin, OmpA/MotB family protein [Oceanibulbus indolifex HEL-45] Length = 309 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 140/332 (42%), Gaps = 32/332 (9%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + ++ IIIK+ A ++ G WK+ YADFMT +MAFFL++WI+ A+D++ + + Y Sbjct: 3 DKKNELIIIKRYDAEGGHAHHGGGWKVAYADFMTAMMAFFLLLWILAASDEEKLRGLANY 62 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F P + + + + + ++ T + + Sbjct: 63 FTPTISD---------GGSSSDAAADLRPLMAAGVMTGAVDNTGNVKKPTFGRDNPMMVF 113 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 DS + + P A +R Sbjct: 114 ---------------------DSRLRDKPSEVVVEYADAPEPAAAADPATVAAVEEAERR 152 Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 K + +A+ I+ + S ++ + V E + + + ++DQ +F + S+ P+ Sbjct: 153 KSEIDRMAEDIAERITSDGELSDLARNVRLEKSNGALTVQVLDQDERSLFTRGSAEVTPK 212 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSE 306 T +L IG+V+A + + I GHTDA+ F N NW LS DRA + + LM +G++ Sbjct: 213 TRELLLAIGDVIAEQNQPVEIIGHTDAATFGANNGYTNWELSADRANATRRTLMAAGING 272 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILV 338 R ++SG A + DP+ + NRRI I + Sbjct: 273 ARFMRVSGVADTQPINTIDPLAAENRRISIRL 304 >gi|221069302|ref|ZP_03545407.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1] gi|220714325|gb|EED69693.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1] Length = 353 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 80/336 (23%), Positives = 138/336 (41%), Gaps = 60/336 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + Q IIIK+ ++ G+WKI YADF+T +MAFFL+MW++ +T + I Y Sbjct: 3 DKKLQPIIIKRVKKTAHA-HHGGAWKIAYADFVTAMMAFFLLMWLLGSTAQGELQGIAAY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K M+ G + + Sbjct: 62 FNSPLKVAMSGGSGAGNSSSIVPGGG---------------------------------- 87 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 N H + + + T + + L L + + Sbjct: 88 -------NDLSKVHGQVRRSESEDNANRRSSQTMGRADESARDAQRLHALKAKVDTMIAN 140 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL + +I + + T G++I I+D +N PMFD S++ P Sbjct: 141 NARLNEFRSQIRTEI----------------THDGLMIQIVDDQNRPMFDSGSAVVKPYM 184 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L++IG + ++ IS+ GHTDA+P+ N NW LS DRA ++ + L+ +G+ Sbjct: 185 RDILREIGAAMGNAENRISLSGHTDAAPYGNADRGYSNWELSADRANASRRELVSAGMPL 244 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 D+++++ G + L + +P + NRRI I V ++ Sbjct: 245 DKLARVVGMSSSDLLLPEEPRAAQNRRITITVLTKE 280 >gi|288942642|ref|YP_003444882.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM 180] gi|288898014|gb|ADC63850.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180] Length = 305 Score = 177 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 130/317 (41%), Gaps = 57/317 (17%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 ++ G+WKI +ADF T +MAFF+++WI+ +T +D K AI YFN M + Sbjct: 19 GGHHGGAWKIAFADFATAMMAFFMLLWIMGSTTEDQKAAISDYFNNPSV-FMGIATSPSQ 77 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 Q S + ID + + + ++ Sbjct: 78 AQGEGTGSKPSLIDFEGAIDMGPPTPEPEL------------------------------ 107 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + D E+ L+ K L ++ + + LA L Sbjct: 108 -------------TALDPERLDELAREQDAARLAALKELLERKLDQSETLAPYKDQLLID 154 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 +V + + + I+D+ + MFD S+ T +L+++G ++ Sbjct: 155 IVPEG-------------LRVQIVDKEHRSMFDLGSAKLKDYTSDILRELGGLINQVPNR 201 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 IS+ GHTDA P ++ NW LS +RA +A + L+ G+ D++ ++ GFA SD Sbjct: 202 ISLTGHTDARPLGGLSYSNWELSTERANAARRALVAGGMRADKVGRVVGFASTVPFDTSD 261 Query: 326 PMNSANRRIDILVEDRQ 342 P N NRRI ++V R+ Sbjct: 262 PNNPINRRISLIVMTRE 278 >gi|260773298|ref|ZP_05882214.1| Flagellar motor rotation protein MotB [Vibrio metschnikovii CIP 69.14] gi|260612437|gb|EEX37640.1| Flagellar motor rotation protein MotB [Vibrio metschnikovii CIP 69.14] Length = 314 Score = 177 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 112/325 (34%), Gaps = 30/325 (9%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 P L ++ +AD M +LM FF+++ + D K I K Sbjct: 5 KRKCPPPGLPAYMGTFADLMALLMCFFVLLLSFSEMDVLKFKQIAGSM-----------K 53 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 F QN E K I + + ++ + + + Sbjct: 54 FAFGVQNRLEVKDIPKGTSVIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGDSDRA 113 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 G+ ST+ ++ +E+ + + ++ + + I Sbjct: 114 GGNQRDDGQLTGGESPETSTE--------DSQDNEDAEQEQEQSEALSEEMEIVLENIKK 165 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L + V E ILI I R F + S+ P+ ++++I E++ Sbjct: 166 ALDREIEQGA---VEVENLGQQILIRI---RERGAFPEGSAFLQPQFRPLVRQIAELVKD 219 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 ++ + GHTD + R NW LS RA S Q + + +G R+ ++ G A Sbjct: 220 VPGIVQVTGHTDNQRLDSELYRSNWDLSAQRAVSVAQEMERVTGFDHRRL-EVRGLADTA 278 Query: 320 LKIASDPM--NSANRRIDILVEDRQ 342 +D S NRR++I + + Sbjct: 279 PVGPNDTEAQRSRNRRVEIGIMQGK 303 >gi|239908607|ref|YP_002955349.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1] gi|239798474|dbj|BAH77463.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1] Length = 346 Score = 177 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 60/312 (19%), Positives = 117/312 (37%), Gaps = 36/312 (11%) Query: 27 PNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDE 86 + GSWK+ YAD +T +MAFFL+MW+++ + K+ I YFN F + Sbjct: 21 GAHGGSWKVAYADLVTAMMAFFLLMWLLSNAPQEKKEEIANYFNEFSLFNNPGPSATLLD 80 Query: 87 QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146 + + + + + Sbjct: 81 VGGVGPPAAVVGTGEERPDVAIDRGGKEPTGGQGQNVGDM-------------------- 120 Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 + K + + + Q L ++I L Sbjct: 121 --------------AGGKHEAPKTKAEADALAKAQAKAEAAAAAQAQALEQQIEQALEKA 166 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 V + + V + + + I+D+ P++D LP+ +L + +V+ + Sbjct: 167 VPE-LAGQVSVTQDKDKVRVEIMDKAERPLYDLGGVALLPDAQRILAAVTDVIRKEGVKV 225 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 +I GHTDA + A NW LS RA +A + ++ +G++ D +++++G++ R + P Sbjct: 226 AIEGHTDAYRYSG-AYSNWDLSAGRALAARRFMVGAGLNPDAVAEVTGYSDTRPYVPGKP 284 Query: 327 MNSANRRIDILV 338 + NRRI +L+ Sbjct: 285 YDPKNRRISLLL 296 >gi|239996641|ref|ZP_04717165.1| flagellar motor protein MotB [Alteromonas macleodii ATCC 27126] Length = 309 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 117/322 (36%), Gaps = 39/322 (12%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 P L +W +AD M++LM FF+++ + D K I K F Sbjct: 10 PPEGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 58 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 QN E K I D + Q++ + + + + + ++ S + Sbjct: 59 VQNKIEVKDIPKGTSVIAMEFRPGKPDPTPIESIQQQTNEMTQQMLEFQAGNEDSAGGRQ 118 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + G+ +T+ S + ++ +L KK++ L Sbjct: 119 KQRGEQRGGQSQQTATE----------------SSSSAEQSTDQSQMAELMKKVAQQLEK 162 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + D V E+ + I I + F S+ P+ VL+KIG +LA Sbjct: 163 QILDG---SVEMESLGQQLTIRIREN---GSFSAGSAFLQPQFQPVLRKIGTLLADVPGE 216 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIA 323 I I GH+D N R NW LS RA + + + G E R+ + G A + Sbjct: 217 IEISGHSDGQHIANELYRSNWDLSAQRAVAVAEAMRTAPGFDESRM-SVVGKADTDPIVE 275 Query: 324 SDP---MNSANRRIDILVEDRQ 342 + + NRR++I + + Sbjct: 276 NATSPSDRAQNRRVEININQGK 297 >gi|332307428|ref|YP_004435279.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174757|gb|AEE24011.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 305 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 120/321 (37%), Gaps = 39/321 (12%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 P L +W +AD M++LM FF+++ + D K I K F Sbjct: 9 PPAGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 57 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 QN E K I D T Q++ + + + + + ++ S + Sbjct: 58 VQNKIEVKDIPKGTSVIAMEFRPGRPDPTPIETIQQQTIEMTQQMLEFQAGNEDSAGGRQ 117 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + + G + + + K +++AK++ Sbjct: 118 KQRGEQKGG--------------------AAQQTASEQSSAKTTASQEEVAKQMKKVAQQ 157 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + E+ ++I I + F S+ P+ +L+KIG +LA Sbjct: 158 LEKEILDGAIEMESLGQQLIIRIREN---GSFSAGSAFLQPQFKPILRKIGTLLADMPGD 214 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA 323 I I GH+D+ N R NW LS RA + + L K+ G E R+ + G A + Sbjct: 215 IEISGHSDSLVISNELYRSNWDLSAQRAVAVAEELRKAPGFDEGRM-AVIGKADTAPLLG 273 Query: 324 SDP--MNSANRRIDILVEDRQ 342 D S NRR++I V+ + Sbjct: 274 EDDAQARSRNRRVEIAVKQGK 294 >gi|149928472|ref|ZP_01916707.1| flagellar motor protein [Limnobacter sp. MED105] gi|149822806|gb|EDM82057.1| flagellar motor protein [Limnobacter sp. MED105] Length = 322 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 77/339 (22%), Positives = 144/339 (42%), Gaps = 62/339 (18%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + ++ II+ KK+ ++ G+WKI YADF+T +MAFFL+MW++ +T + K I Sbjct: 2 AKSDEERPIIVVKKIKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSEGDLKGIS 61 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFN K + G + + + ++++ +K GST++ Sbjct: 62 DYFNSPLKVALVGGPG---------SGTATSVIDAGGTDLSRSVGQIKSGSTDKATNSSN 112 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + L Sbjct: 113 --------------------------------------------------ADATAEALER 122 Query: 187 KRKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 KRL +L +I + + + ++ + T G+ I I+D+RN PMFD S++ Sbjct: 123 AESKRLLELKGEIEGLIDASDLMKQFKNQIMLDITPEGLRIQIVDERNRPMFDSGSAVLK 182 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSG 303 +L+ + ++L +++ GHTDA+P+ N NW LS DRA ++ + + +G Sbjct: 183 DYMKDILRNLTKLLNQVPNKLTLSGHTDATPYAAGNKGYSNWELSADRANASRREMTLAG 242 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + + ++ ++ G A DP + NRRI I+V +++ Sbjct: 243 MPDSKMLRVVGLASSVSLDEKDPYAAVNRRIAIVVMNKR 281 >gi|56461234|ref|YP_156515.1| flagellar motor protein MotB [Idiomarina loihiensis L2TR] gi|56180244|gb|AAV82966.1| Flagellar motor protein [Idiomarina loihiensis L2TR] Length = 312 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 117/346 (33%), Gaps = 49/346 (14%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M S +++E + + P L W +AD MT+LM FF+++ + D Sbjct: 1 MASEKVRDEEQED---------CNCPPPGLPMWMATFADLMTLLMCFFVLLLAFSEMDVL 51 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 K I K QN E K I + + T Q Sbjct: 52 KFKQIAGSM-----------KYALGVQNKIEVKDIPKGTSVIAQEFRPGRPEPTPIETIQ 100 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 ++ + + + + + + E + Sbjct: 101 QQTVEMTQQMLEFQEGESDFAGGQQTERGGQES---------------------DSADDQ 139 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 ++ A + Q + + L + + E I+I I +Q F + Sbjct: 140 KEAEAENTEAMTQVSKELMRRIERQLENEIKAGTIELEQHGQQIIIRIREQ---GSFPEG 196 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL 299 S+ P+ ++Q++ L ++I GH+D + +W LS RA + + + Sbjct: 197 SAFLQPQFRPIIQQVAGALKDIPGEVTISGHSDNEKLVSEIYSSDWDLSSKRAVAVAEEM 256 Query: 300 MK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 +K SEDR+ + G++ + + ++ NRR++I + + Sbjct: 257 LKVDDFSEDRLV-VMGYSDTKPLVPNNSEENRKRNRRVEISIMQGK 301 >gi|241763663|ref|ZP_04761713.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN] gi|241367138|gb|EER61504.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN] Length = 310 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 78/337 (23%), Positives = 135/337 (40%), Gaps = 62/337 (18%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ Q IIIK+ + G+WKI YADF+T +MAFFL+MW++ +T Sbjct: 3 EKKLQPIIIKRIKKSGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGEL------ 55 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 +GI N P + + D + + + + + + + Sbjct: 56 ------------QGIAAYFNSPLKVAMVGGDGAGNSSSVIPGGGNDLSKVHGQVRRSDSD 103 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + ++ + A + Sbjct: 104 QDKERRASIDTT----------------------------------------RAERAKQD 123 Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 R++ L KI + + + + + T G+ I I+D +N PMFD S++ P Sbjct: 124 AARIKALQAKIDAMITENPRLNEYKSQIRIDVTPDGLQIQIVDNQNRPMFDSGSALVKPY 183 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L IS+ GHTDA+P+ N NW LS DRA ++ + L+ +G+ Sbjct: 184 MRDILREIGAALGGVENRISLAGHTDAAPYGNSDRGYSNWELSADRANASRRELVSAGMP 243 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ ++ G A L +P ANRRI I V R+ Sbjct: 244 DAKLGRVVGLAASDLLEPDNPRAPANRRITITVLTRE 280 >gi|109897648|ref|YP_660903.1| flagellar motor protein MotB [Pseudoalteromonas atlantica T6c] gi|109699929|gb|ABG39849.1| OmpA/MotB [Pseudoalteromonas atlantica T6c] Length = 305 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 118/321 (36%), Gaps = 39/321 (12%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 P L +W +AD M++LM FF+++ + D K I K F Sbjct: 9 PPAGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 57 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 QN E K I D T Q++ + + + + + ++ S + Sbjct: 58 VQNKIEVKDIPKGTSVIAMEFRPGRPDPTPIETIQQQTIEMTQQMLEFQAGNEDSAGGRQ 117 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + + G + + + K ++ K++ Sbjct: 118 KQRGEQKGG--------------------AAQQTASEQSSAKTTASQEEANKQMKKVAQQ 157 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + E+ ++I I + F S+ P+ +L+KIG +LA Sbjct: 158 LEKEILDGAIEMESLGQQLIIRIREN---GSFSAGSAFLQPQFKPILRKIGTLLADMPGD 214 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA 323 I I GH+D+ N R NW LS RA + + L K+ G E R+ + G A + Sbjct: 215 IEISGHSDSLVISNELYRSNWDLSAQRAVAVAEELRKAPGFDEGRM-AVIGKADTAPLLG 273 Query: 324 SDP--MNSANRRIDILVEDRQ 342 D S NRR++I ++ + Sbjct: 274 EDDAQARSRNRRVEIAIKQGK 294 >gi|88799579|ref|ZP_01115155.1| Flagellar motor protein [Reinekea sp. MED297] gi|88777664|gb|EAR08863.1| Flagellar motor protein [Reinekea sp. MED297] Length = 319 Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 123/325 (37%), Gaps = 49/325 (15%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 + L +W ++D M +LM FF+++ + D K + Sbjct: 7 DCPECEPGLPAWMATFSDLMALLMCFFVLLLSFSEMDALKFKRLAGSLR----------- 55 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 F Q + K I + + + + ++ L++++ L + Sbjct: 56 NAFGVQAEINANDVPKGTSIIAKEFSPGRPEPTPLNVVRQDTVADLKDSLEILCQDTFTM 115 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + + ++++ I++ + + L+D A +I+ Sbjct: 116 QEEAQGDQG--------------------------QMTRQVIISDEAMQELEDEAARIAQ 149 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 LS +A+ + + ET I+I + +Q F S E + VL K+ E+L Sbjct: 150 ALSDEIAEGM---LQIETVNETIIIRVKEQ----SFTGGSDYVADEFLPVLDKVRELLVT 202 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHR 319 + I + GHTD P R+NW LS RA S + L + ++E+R I G + Sbjct: 203 TPGDIWVEGHTDNVPIATSQFRNNWLLSAARALSVAEYLFIAPEMAEERF-TIVGHGSTK 261 Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342 +++ + NRR++I+++ Sbjct: 262 PIASNETPEGRAQNRRVEIIIKKPN 286 >gi|332141875|ref|YP_004427613.1| flagellar motor protein MotB [Alteromonas macleodii str. 'Deep ecotype'] gi|327551897|gb|AEA98615.1| flagellar motor protein MotB [Alteromonas macleodii str. 'Deep ecotype'] Length = 309 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 66/322 (20%), Positives = 115/322 (35%), Gaps = 39/322 (12%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 P L +W +AD M++LM FF+++ + D K I K F Sbjct: 10 PPEGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 58 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 QN E K I D + Q++ + + + + + ++ S + Sbjct: 59 VQNKIEVKDIPKGTSVIAMEFRPGKPDPTPIESIQQQTNEMTQQMLEFQAGNEDSAGGRQ 118 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + G ++ S + ++ +L KK++ L Sbjct: 119 KQRGEQRGG----------------QSQQTATQSSSSAEQSTDQSQMAELMKKVAQQLEK 162 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + D V E+ + I I + F S+ P+ VL+KIG +LA Sbjct: 163 QILDG---SVEMESLGQQLTIRIREN---GSFSAGSAFLQPQFQPVLRKIGTLLADVPGE 216 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIA 323 I I GH+D N R NW LS RA + + + G E R+ + G A + Sbjct: 217 IEISGHSDGQHIANELYRSNWDLSSQRAVAVAEAMRTAPGFDESRM-SVVGKADTAPIVE 275 Query: 324 SDP---MNSANRRIDILVEDRQ 342 + + NRR++I + + Sbjct: 276 NATTSADRAKNRRVEININQGK 297 >gi|119897740|ref|YP_932953.1| flagellar motor protein MotB [Azoarcus sp. BH72] gi|119670153|emb|CAL94066.1| flagellar motor protein MotB [Azoarcus sp. BH72] Length = 357 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 74/337 (21%), Positives = 143/337 (42%), Gaps = 51/337 (15%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ Q I++K+ + G+WKI YADF+T ++AFFL+MW++ +T + I Y Sbjct: 3 DDSQQPIVVKRIKKGGGGHH-GGAWKIAYADFVTAMIAFFLLMWLLGSTAQGDLEGIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K M +G D + + E +T++ +K G ++ Sbjct: 62 FQNPLKLAMDGGEGSGDSSSIIKGG---------GEDLTRSVGQVKRGDVEGDRRINLD- 111 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + +++ + + Sbjct: 112 -------------------------------------AAKGRQAPSADGKGRDEAESNRE 134 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL +I + + +L + G+ I ++D++N PMF+ +S+ P Sbjct: 135 RSRLIDLKGRIEAIVEANPDLRQFKNQILMDIVNEGLRIQLVDEQNRPMFNSASADLRPY 194 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 T +L+ IG L +S+ GHTD++ + NW LS +RA ++ + L+ G+ Sbjct: 195 TRDLLRAIGRALNDVGNSVSVSGHTDSAQYAGGERGFSNWELSSNRANASRRELVSGGLL 254 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A ++PM++ NRRI I+V ++Q Sbjct: 255 AGKVVRVVGLADTIPLNRANPMDAVNRRISIIVLNKQ 291 >gi|254787123|ref|YP_003074552.1| flagellar motor protein MotB [Teredinibacter turnerae T7901] gi|237687385|gb|ACR14649.1| putative chemotaxis protein MotB [Teredinibacter turnerae T7901] Length = 329 Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats. Identities = 66/322 (20%), Positives = 111/322 (34%), Gaps = 47/322 (14%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 + P L +W +AD M++LM FF+++ + D K + F Sbjct: 10 ECPPGLPAWMGTFADLMSLLMCFFVLLLSFSEMDAMKFKRLAGSMAQA-----------F 58 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 QN + K I + + + + + E ++ + Sbjct: 59 GVQNKLNVTDIPKGTSIIAQEFSPARPEPTPLNVIYQNTQDITEMSLEQDCAQEYDIEQG 118 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 K + K D L K ++ +LA+ ++ + Sbjct: 119 EEGVDGGIKVRVKQKLED---------------------LLQKTEQDAYELAEALNEQIE 157 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 + +G L R F S+ PE V+ ++ VL Sbjct: 158 AGQVEVETRGRLIIIRI----------REKGSFVSGSAELAPEYRDVMGEVRSVLTLKPG 207 Query: 265 VISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I ++GH+D P R R NW LS RA S Q LM G ++SGFA R +A Sbjct: 208 RIEVQGHSDNIPVRRGRYRSNWELSAARAVSVAQELMSGGALPPNRFEVSGFADTRPLVA 267 Query: 324 SDP--MNSANRRIDILVEDRQG 343 + + NRR++IL+ +QG Sbjct: 268 NTTPENRARNRRVEILI--KQG 287 >gi|54308004|ref|YP_129024.1| flagellar motor protein MotB [Photobacterium profundum SS9] gi|46912430|emb|CAG19222.1| putative sodium-driven polar flagellar protein MotB [Photobacterium profundum SS9] Length = 310 Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 105/322 (32%), Gaps = 39/322 (12%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 P W +AD T+LM FF+++ + D K I K F Sbjct: 7 KCPPGAPLWMATFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAF 55 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 QN E K I + + ++ + + + Sbjct: 56 GVQNMLEVKDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRTLDFHDGESDRAGGT 115 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 GK +T + ++ + + + L + + L Sbjct: 116 KRDAGKLTGGKSADVATQMNQNNQS-----------------EMSESQEQLLEVMQKALD 158 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 + D + E ++I I ++ F S+ P+ ++++I +++ Sbjct: 159 REIQDGA---IEVENFGQQVVIRIKEK---GAFPAGSAFLQPKFRPLVRQIADLVKDVPG 212 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322 +I I GHTD + R NW LS RA S Q + + G R+ ++ G A Sbjct: 213 IIRISGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEQVKGFDHKRL-RVVGLADTAPLN 271 Query: 323 ASDPMNSA--NRRIDILVEDRQ 342 ++ NRR++I + + Sbjct: 272 SNKTAEERKVNRRVEISIMQGK 293 >gi|90410908|ref|ZP_01218922.1| flagellar motor protein [Photobacterium profundum 3TCK] gi|90328121|gb|EAS44432.1| flagellar motor protein [Photobacterium profundum 3TCK] Length = 310 Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 105/322 (32%), Gaps = 39/322 (12%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 P W +AD T+LM FF+++ + D K I K F Sbjct: 7 KCPPGAPLWMATFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAF 55 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 QN E K I + + ++ + + + Sbjct: 56 GVQNMLEVKDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRTLDFHDGESDRAGGT 115 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 G+ +T + ++ + + + L + + L Sbjct: 116 KRDAGKLTGGQSADVATQMNQNNQS-----------------EMSESQEQLLEVMQKALD 158 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 + D + E ++I I ++ F S+ P+ ++++I +++ Sbjct: 159 REIQDGA---IEVENFGQQVVIRIKEK---GAFPAGSAFLQPKFRPLVRQIADLVKDVPG 212 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322 +I I GHTD + R NW LS RA S Q + + G R+ ++ G A Sbjct: 213 IIRISGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEQVKGFDHKRL-RVVGLADTAPLN 271 Query: 323 ASDPMNSA--NRRIDILVEDRQ 342 ++ NRR++I + + Sbjct: 272 SNKTAEERKVNRRVEISIMQGK 293 >gi|291617784|ref|YP_003520526.1| MotB [Pantoea ananatis LMG 20103] gi|291152814|gb|ADD77398.1| MotB [Pantoea ananatis LMG 20103] gi|327394202|dbj|BAK11624.1| chemotaxis protein MotB [Pantoea ananatis AJ13355] Length = 424 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 79/334 (23%), Positives = 124/334 (37%), Gaps = 71/334 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + ++ I++ +K GSWKI YADFMT +MAFF+VMW+++ I +Y Sbjct: 2 KHGNRPIVLIRKRKHKKHEGGHGSWKIAYADFMTAMMAFFMVMWLLSIASPQQLIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K +T + D +P + TK ++K Sbjct: 62 FQTPLKVALTGGQRSSDSSSPIPGG---------GDDPTKKEGEVK-------------- 98 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 K D++ K + L L ++ ++ Sbjct: 99 ------------------------------KVVDMDAQKRKLDEIRLNRLREKLDQLIEA 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL+ L + + G+ I IID +N PMF S+ P Sbjct: 129 DPRLKALRPHL----------------IINMVEEGLRIQIIDSQNRPMFKTGSAEVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL ISI GHTD + NW LS DRA ++ + L+ G+ Sbjct: 173 RDILRAIAPVLNDIPNRISIAGHTDDIQYAGGDKGYSNWELSADRANASRRELVIGGLDG 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 +I +I G A ++ NRRI +LV + Sbjct: 233 GKILRIVGMADTMKLKNRGGDDAVNRRISLLVLN 266 >gi|262402758|ref|ZP_06079319.1| Flagellar motor rotation protein MotB [Vibrio sp. RC586] gi|262351540|gb|EEZ00673.1| Flagellar motor rotation protein MotB [Vibrio sp. RC586] Length = 304 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 110/312 (35%), Gaps = 31/312 (9%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W +AD M++LM FF+++ + D K I K F QN E Sbjct: 2 WLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEV 50 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 K I + + ++ + + + + Sbjct: 51 KDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGDSDRAGGNQRDSG--- 107 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 K T + + + + ++ A ++++ +A+ I LS + Sbjct: 108 ------KLTGGQSAESSTQENQNTQSDMQQQQAKAMSEQMETVAESIKKALSREIEQGA- 160 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 + E I I I ++ F + S+ P+ ++++I +++ + + GHT Sbjct: 161 --IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVKDIPGKVRVTGHT 215 Query: 273 DASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--N 328 D + R NW LS RA S Q + K G R+ ++ G A + +D Sbjct: 216 DNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHQRL-QVRGMADTQPLGPNDTEAQR 274 Query: 329 SANRRIDILVED 340 + NRR++I + Sbjct: 275 ALNRRVEISILQ 286 >gi|163793054|ref|ZP_02187030.1| OmpA/MotB [alpha proteobacterium BAL199] gi|159181700|gb|EDP66212.1| OmpA/MotB [alpha proteobacterium BAL199] Length = 373 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 79/332 (23%), Positives = 148/332 (44%), Gaps = 31/332 (9%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 +N I+IKK ++ G+WK+ YADF+T +MAFFL++W++NAT ++ K I YF Sbjct: 2 DNHATIVIKKVKKGGHGGHHGGAWKVAYADFVTAMMAFFLLLWLLNATTEEQKMGISNYF 61 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +P + T++ +G T+ Sbjct: 62 DPTAISR-----------------------------STRSGSGGLLGGTSITVPGALKTP 92 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + ++ Q + T + D ++ + ++E + E+++ + + Sbjct: 93 SSPPQISTPQVARPQAERTESLDPDSDDPENIESRLGSREDEEGTVNQEVVEQLMREREQ 152 Query: 190 KRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ +D I + ++ + + ++T G+ I +IDQ +F S+ +T Sbjct: 153 QQFEDAEAAIKEAIEKSPELSDVAESIKVDSTPEGLRIQLIDQERIALFPNGSASMYEQT 212 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSED 307 +L K+ EV+A I I GHTD+ F NW LS DRA ++ +V++ +G+ E Sbjct: 213 RKLLIKVAEVVAALPNKIEITGHTDSKQFHPGSTYTNWDLSSDRANASRRVMVANGIDEK 272 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 RI ++ G A + DP + NRRI I+++ Sbjct: 273 RIDEVVGKADRDPLVVEDPSDPTNRRISIILK 304 >gi|315125812|ref|YP_004067815.1| flagellar motor protein MotB [Pseudoalteromonas sp. SM9913] gi|315014326|gb|ADT67664.1| flagellar motor protein MotB [Pseudoalteromonas sp. SM9913] Length = 306 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 64/303 (21%), Positives = 111/303 (36%), Gaps = 35/303 (11%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 P L +W +AD M++LM FF+++ + D K I K F Sbjct: 9 PPPGLPAWMGTFADLMSLLMCFFVLLLAFSEMDVLKFKQIAGSM-----------KFAFG 57 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 QN E K I T + T Q++ + + + + + + S + Sbjct: 58 VQNKIEVKDIPKGTSVIAMEFTPGKPEPTPIETIQQQTVEMTQQMLEFQAGDESSAGGRQ 117 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + G+ S ++ + ++++ DL KKI+ L Sbjct: 118 EQRGEKRGGESSSTSEEVAAATAVSAA---------------DQEQINDLVKKIAQQLEK 162 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + D + E+ I+I I + F S+ P+ ++Q IG +L Sbjct: 163 QIIDGA---IELESLGQQIIIRIREN---GSFPSGSAFLQPQFKPIIQDIGRLLKDVPGE 216 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323 I++ GHTD N +NW LS RA + L K G + R+ + G A R + Sbjct: 217 ITVSGHTDDFQVSNELYINNWDLSSKRAVAVASELQKVPGFDKTRMM-VVGRAETRPLVP 275 Query: 324 SDP 326 +D Sbjct: 276 NDS 278 >gi|323492326|ref|ZP_08097479.1| chemotaxis LafU protein [Vibrio brasiliensis LMG 20546] gi|323313373|gb|EGA66484.1| chemotaxis LafU protein [Vibrio brasiliensis LMG 20546] Length = 330 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 71/331 (21%), Positives = 119/331 (35%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ D P++ G+WK+ +ADFM LMA FLV+W++ D + +KAI + + Sbjct: 3 RQEQVVFKRSKKHDHEPHHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + Q S + IDL+ D + ++ Sbjct: 63 SSSVFDKSYGNPFDTSQ------SISPIDLASDSSVPSRHDSTHTVNSFFDGDGD----- 111 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 P ++ Sbjct: 112 --------------------------------------------GPETDSLIPGTFDTQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 RL LAK I + A V T G+ + + D MF + + P Sbjct: 128 RLAALAKVIEEAVRQSSAQG---NVNVTVTPQGLRVVLQDDYKQHMFSRGGAELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + V I I GHTD++ F++ NW LS RA A L+ G+ ++R Sbjct: 185 LLLALAPVFKRVVNPIIISGHTDSTQFKHRFKQASNWELSASRANVARVTLVSGGMPDER 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L DP +S NRRI++ V Sbjct: 245 VLQVTGMSDRALLNNDDPESSENRRIELFVL 275 >gi|311279213|ref|YP_003941444.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1] gi|308748408|gb|ADO48160.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1] Length = 309 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 123/334 (36%), Gaps = 71/334 (21%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++++++ + GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 5 SHPIVVVRRRKHKNHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFR 64 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 +T + + +P + + N +LK Sbjct: 65 TPLATAITGGPRVSNSSSPIPGGGDDFTQQQGEVKKEPNIDELK---------------- 108 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + E L + E ++ Sbjct: 109 -------------------------------------KRMEQNRLKKIRGELDQLIEADP 131 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L+ L + L G+ I IID +N PMF S+ P Sbjct: 132 KLKALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSAEVEPYMRD 175 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ I VL IS+ GHTD + N NW LS +RA ++ + L+ G+ + + Sbjct: 176 ILRAIAPVLNEIPNKISLSGHTDDYQYANGDRGYSNWELSAERANASRRELVAGGLDDGK 235 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ G A+ ++ NRRI +LV + Q Sbjct: 236 VLRVVGMANTMKLQEHGGDDAINRRISLLVLNNQ 269 >gi|330501121|ref|YP_004377990.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] gi|328915407|gb|AEB56238.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] Length = 313 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 126/344 (36%), Gaps = 63/344 (18%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G E IIIK++ + G+WK+ +ADF +MA F+V+WII D Sbjct: 1 MKPRGGDGHE----IIIKRRGKKGGHDEHGGAWKVAFADFTMAMMALFMVLWIIQPQTQD 56 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +A N + GIFD + Sbjct: 57 ASRANADMLNNPLVD---GGAGIFDGTSTTPL---------------------------- 85 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + + RD E + P Sbjct: 86 ----------------DLDGVPVQVAPRRDPENRARTPQEDPGAALGEGLPGEPRRPHFA 129 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 E + + K +++LA ++ + + + + G+ I I D MF++ Sbjct: 130 EPLQMQELAKLMKELALQLDAEAN----------IEVQVVPQGLRILIKDDAQRFMFNRG 179 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQV 298 SS P +L+++ +L + I GHTD+ P+R +NW LS DRA A V Sbjct: 180 SSHLNPHFETLLRRLAGILGRVENHLIISGHTDSMPYRGVVGGYNNWNLSGDRALRARNV 239 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 L+++G+ + +++ A + +DP N ANRRI++L+ Q Sbjct: 240 LVEAGLPTGNVLQVAAQADGMPLLPNDPENGANRRIELLLLTSQ 283 >gi|319764525|ref|YP_004128462.1| ompa/motb domain protein [Alicycliphilus denitrificans BC] gi|317119086|gb|ADV01575.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC] Length = 312 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 78/337 (23%), Positives = 131/337 (38%), Gaps = 63/337 (18%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ Q IIIK+ + G+WKI YADF+T +MAFFL+MW++ +T + Sbjct: 3 EKKLQPIIIKRIKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQ----- 56 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 G AS Q + + + ++K Sbjct: 57 ----GIAAYFASPLKVAMQGGDGAGNSSSVIPGGGNDLSKVHGQ---------------- 96 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + +S ++ + A Sbjct: 97 ----------------------------------VRRSDSESNTSTRSIDTVRAERARLD 122 Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +R++ L KI + + + + + T G+ I I+D +N PMFD S++ P Sbjct: 123 AQRIKALQSKIDAMITENPRLNEYRSQIRIDVTPDGLQIQIVDDQNRPMFDSGSALVKPY 182 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L IS+ GHTDA+P+ N NW LS DRA ++ + L+ +G+ Sbjct: 183 MRDILREIGAALGSVENRISLAGHTDAAPYGNGDRGYSNWELSADRANASRRELVAAGMP 242 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + R+ ++ G A L +P NRRI I V + Sbjct: 243 DARLGRVVGLAASDLLEPDNPRAPVNRRITITVLTHE 279 >gi|149908742|ref|ZP_01897403.1| Hypothetical chemotaxis LafU protein [Moritella sp. PE36] gi|149808284|gb|EDM68223.1| Hypothetical chemotaxis LafU protein [Moritella sp. PE36] Length = 334 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 76/327 (23%), Positives = 121/327 (37%), Gaps = 41/327 (12%) Query: 13 QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72 + IIIK+K G+WK+ +ADFM LMAFF+V+WI+ +D D +K + Sbjct: 3 ESIIIKRKRRSRGKSKGGGAWKVAFADFMLALMAFFMVLWILAVSDADERKEFSENIRN- 61 Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 +L + FD P +S +D Sbjct: 62 -YSLFESESNPFDFSGNPLPTSIGADLSVLDSKHQP------------------------ 96 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++H + T S + D N L +L Sbjct: 97 -----DLTKHSVSKKTARSLNQRTADDEGDSGYGDKPMMNSLLKGQLTSPDQLALLASKL 151 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + I + + E G+ I + D MF + S+ P VL Sbjct: 152 EAITDSI----------GAAENIDIEVVPQGLRILLHDNAKHKMFRRGSAQMTPFFQDVL 201 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + + V + I GHTD S F N A NW LS RA A Q+L G+ +R++++ Sbjct: 202 RSLAPVFIPIENKLMISGHTDRSKFHNAAFTNWELSSQRALQARQMLQIGGMPRERVAQV 261 Query: 313 SGFAHHRLKIASDPMNSANRRIDILVE 339 + A++P +S NRRI++L+ Sbjct: 262 VAMSDTMPIDAANPKSSVNRRIELLLL 288 >gi|323224726|gb|EGA08995.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] Length = 309 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 74/333 (22%), Positives = 121/333 (36%), Gaps = 71/333 (21%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 +++K++ GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 6 HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 +T G+ ++P + + N +LK Sbjct: 66 PLATAVTGGTGLPIAESPIPGGGDDYTQQQGEVEKQPNIDELK----------------- 108 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + E L L + ++ + Sbjct: 109 ------------------------------------KRMEQSRLNKLRGDLDQLIESDPK 132 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L+ L + L V + + ++ R PMF S+ P + Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNR-------------PMFKTGSAEVEPYMRDI 176 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L+ I VL IS+ GHTD P+ N NW LS DRA ++ + L+ G+ ++ Sbjct: 177 LRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKV 236 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ G A P ++ NRRI +LV ++Q Sbjct: 237 LRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 269 >gi|330826741|ref|YP_004390044.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans K601] gi|329312113|gb|AEB86528.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601] Length = 311 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 78/337 (23%), Positives = 131/337 (38%), Gaps = 63/337 (18%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ Q IIIK+ + G+WKI YADF+T +MAFFL+MW++ +T + Sbjct: 3 EKKLQPIIIKRIKKGGHA-AHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQ----- 56 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 G AS Q + + + ++K Sbjct: 57 ----GIAAYFASPLKVAMQGGDGAGNSSSVIPGGGNDLSKVHGQ---------------- 96 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + +S ++ + A Sbjct: 97 ----------------------------------VRRSDSESNTSTRSIDTVRAERARLD 122 Query: 189 KKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +R++ L KI + + + + + T G+ I I+D +N PMFD S++ P Sbjct: 123 AQRIKALQSKIDAMITENPRLNEYRSQIRIDVTPDGLQIQIVDDQNRPMFDSGSALVKPY 182 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L IS+ GHTDA+P+ N NW LS DRA ++ + L+ +G+ Sbjct: 183 MRDILREIGAALGSVENRISLAGHTDAAPYGNGDRGYSNWELSADRANASRRELVAAGMP 242 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + R+ ++ G A L +P NRRI I V + Sbjct: 243 DARLGRVVGLAASDLLEPDNPRAPVNRRITITVLTHE 279 >gi|149191103|ref|ZP_01869362.1| flagellar motor protein MotB [Vibrio shilonii AK1] gi|148835031|gb|EDL52009.1| flagellar motor protein MotB [Vibrio shilonii AK1] Length = 294 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 105/313 (33%), Gaps = 35/313 (11%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 +AD M++LM FF+++ + D K I K F QN E Sbjct: 1 MGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEVK 49 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 K I + + ++ + + + Sbjct: 50 DIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDRAGGNQRDDGKMTG 109 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 G+ ++ + + + + L L + I L + Sbjct: 110 GQTADRTQKNQIGT-------------ASAQSEQENEDLDKLEEIIKKALQQEIKQGA-- 154 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 V + ++I I ++ F + S+ P+ +++++ +++ + + GHTD Sbjct: 155 -VEVDNLGQQLVIRIQEK---GAFPEGSAFLQPKFRPLVRQVADLVKDIPGQVRVSGHTD 210 Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NS 329 P + R NW LS RA S Q + K G S R+ ++ G A +D + Sbjct: 211 NLPLDSELYRSNWDLSSQRAVSVAQEMEKVKGFSHQRL-RVLGVADTEPLGPNDTERQRA 269 Query: 330 ANRRIDILVEDRQ 342 NRR++I + + Sbjct: 270 RNRRVEISIMQGE 282 >gi|226944522|ref|YP_002799595.1| flagellar motor protein [Azotobacter vinelandii DJ] gi|226719449|gb|ACO78620.1| Flagellar motor protein [Azotobacter vinelandii DJ] Length = 306 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 69/334 (20%), Positives = 129/334 (38%), Gaps = 69/334 (20%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 +++ +II ++ ++ G+WKI +ADFMT LMA FLV+W++ + + K A+ +YF Sbjct: 2 SERPVIIIRRKKRGGEGHHGGAWKIAFADFMTALMALFLVLWMLANSGEAQKAAVAEYFR 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + +N + Sbjct: 62 TPLVVALMGGDREGASENVIPGGGPDPT-------------------------------- 89 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 +E + + ++++E L L + A+ Sbjct: 90 -------------------FAEGERFRIDPQLASRLVDEQERARLRQLERRIREALSINP 130 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L++L +I L + T G+ I ++D PMF+ S+ P Sbjct: 131 ILKELKDQI----------------LIDLTPEGLRIQLVDTEQRPMFEIGSARVAPYMRT 174 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ + +L I I GHTD+ P+ NW LS DRA ++ + L+ G++ ++ Sbjct: 175 LLRTLAPMLNELPNRIQISGHTDSLPYAGGEAGYSNWELSADRANASRRELIAGGLALEK 234 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + + SG + P ++ANRRI ++V D + Sbjct: 235 LLRTSGMSDRIPFEGVAPNDAANRRIAVIVLDSR 268 >gi|90579839|ref|ZP_01235647.1| flagellar motor protein [Vibrio angustum S14] gi|90438724|gb|EAS63907.1| flagellar motor protein [Vibrio angustum S14] Length = 307 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 108/322 (33%), Gaps = 39/322 (12%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 W +AD T+LM FF+++ + D K I K F Sbjct: 7 KCKKGAPPWMATFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KYAF 55 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 QN E + K I + + ++ + ++ + Sbjct: 56 GVQNMLEVNDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRSLDFHEGESDRAGGT 115 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 G+ +T + + ++ + L + ++ L Sbjct: 116 QRDAGKLTGGQSKKTATQNN-----------------ENDESEAEQMQEKLKEVLTKALE 158 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 ++D + E ++I I ++ F + S+ P+ +++++ ++ Sbjct: 159 REISDK---IIEIENLGQQLVIRIREK---GSFPEGSAFLQPKFKPLVRQVAMLVKDVPG 212 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322 +I + GHT + + R NW LS RA S Q + K G ++ ++ G A + Sbjct: 213 IIRVTGHTASDKLDSELYRSNWDLSAQRAVSVAQEMEKVEGFDHTKM-RVVGLADTQPIA 271 Query: 323 ASDPMN--SANRRIDILVEDRQ 342 + + NRR++I + + Sbjct: 272 DNKTQEGKAKNRRVEISIMQGK 293 >gi|213054486|gb|ACJ39422.1| PomB2 [Aeromonas hydrophila] Length = 297 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 108/325 (33%), Gaps = 47/325 (14%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 P L + +AD M++LM FF+++ D K I Sbjct: 3 KCKCPPPGLPGYMGTFADLMSLLMCFFVLLLSFAEMDVQKFKQIAGSME----------- 51 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 F QN E K I + T ++ + + + Sbjct: 52 KAFGVQNILEVKDIPKGTSVIALEFRPGRPEPTPIDTIMQQTMDMTQTELDFQPGDADQA 111 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + G + A K++++ DLAK+++ Sbjct: 112 GGHDKSEDKLVGGDT-------------------------RQEAQKKQEQSNDLAKELAE 146 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + + D + E I+I I ++ F S+ P+ V++K+ +L Sbjct: 147 QMKAQIQDGA---IEVEALGQQIIIRIREKAA---FPAGSAFLQPQFWPVVRKVATLLKD 200 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 I+I GHTD + + NW LS RA + ++K G R+ + G A + Sbjct: 201 VPGEITISGHTDDVATEDELFQSNWELSSQRAVAVAHQMIKVPGFDGGRLV-VQGMADSQ 259 Query: 320 LKIASDPMNSA--NRRIDILVEDRQ 342 + + + NRR++I + + Sbjct: 260 PLVPNTTPENRRMNRRVEISIMQGK 284 >gi|15640909|ref|NP_230540.1| flagellar motor protein MotB [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121588125|ref|ZP_01677872.1| chemotaxis protein PomB [Vibrio cholerae 2740-80] gi|121728326|ref|ZP_01681356.1| chemotaxis protein PomB [Vibrio cholerae V52] gi|147674334|ref|YP_001216371.1| flagellar motor protein MotB [Vibrio cholerae O395] gi|153216012|ref|ZP_01950234.1| flagellar motor protein [Vibrio cholerae 1587] gi|153802297|ref|ZP_01956883.1| chemotaxis protein PomB [Vibrio cholerae MZO-3] gi|153817212|ref|ZP_01969879.1| chemotaxis protein PomB [Vibrio cholerae NCTC 8457] gi|153823690|ref|ZP_01976357.1| chemotaxis protein PomB [Vibrio cholerae B33] gi|153827046|ref|ZP_01979713.1| chemotaxis protein PomB [Vibrio cholerae MZO-2] gi|153830558|ref|ZP_01983225.1| chemotaxis protein PomB [Vibrio cholerae 623-39] gi|227081069|ref|YP_002809620.1| chemotaxis protein PomB [Vibrio cholerae M66-2] gi|229505502|ref|ZP_04395012.1| Flagellar motor rotation protein MotB [Vibrio cholerae BX 330286] gi|229510828|ref|ZP_04400307.1| Flagellar motor rotation protein MotB [Vibrio cholerae B33] gi|229513008|ref|ZP_04402474.1| Flagellar motor rotation protein MotB [Vibrio cholerae TMA 21] gi|229517949|ref|ZP_04407393.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC9] gi|229523310|ref|ZP_04412717.1| Flagellar motor rotation protein MotB [Vibrio cholerae TM 11079-80] gi|229525508|ref|ZP_04414913.1| Flagellar motor rotation protein MotB [Vibrio cholerae bv. albensis VL426] gi|229530005|ref|ZP_04419395.1| Flagellar motor rotation protein MotB [Vibrio cholerae 12129(1)] gi|229608521|ref|YP_002879169.1| flagellar motor protein MotB [Vibrio cholerae MJ-1236] gi|254285566|ref|ZP_04960530.1| chemotaxis protein PomB [Vibrio cholerae AM-19226] gi|254848028|ref|ZP_05237378.1| flagellar motor protein PomB [Vibrio cholerae MO10] gi|262191489|ref|ZP_06049674.1| Flagellar motor rotation protein MotB [Vibrio cholerae CT 5369-93] gi|297581278|ref|ZP_06943202.1| chemotaxis protein PomB [Vibrio cholerae RC385] gi|298498985|ref|ZP_07008792.1| flagellar motor protein PomB [Vibrio cholerae MAK 757] gi|9655348|gb|AAF94055.1| chemotaxis protein PomB [Vibrio cholerae O1 biovar El Tor str. N16961] gi|51241597|emb|CAH17908.1| flagellar motor protein PomB [Vibrio cholerae] gi|121547616|gb|EAX57715.1| chemotaxis protein PomB [Vibrio cholerae 2740-80] gi|121629381|gb|EAX61811.1| chemotaxis protein PomB [Vibrio cholerae V52] gi|124114525|gb|EAY33345.1| flagellar motor protein [Vibrio cholerae 1587] gi|124122179|gb|EAY40922.1| chemotaxis protein PomB [Vibrio cholerae MZO-3] gi|126512246|gb|EAZ74840.1| chemotaxis protein PomB [Vibrio cholerae NCTC 8457] gi|126518793|gb|EAZ76016.1| chemotaxis protein PomB [Vibrio cholerae B33] gi|146316217|gb|ABQ20756.1| chemotaxis protein PomB [Vibrio cholerae O395] gi|148873956|gb|EDL72091.1| chemotaxis protein PomB [Vibrio cholerae 623-39] gi|149739087|gb|EDM53383.1| chemotaxis protein PomB [Vibrio cholerae MZO-2] gi|150424428|gb|EDN16365.1| chemotaxis protein PomB [Vibrio cholerae AM-19226] gi|227008957|gb|ACP05169.1| chemotaxis protein PomB [Vibrio cholerae M66-2] gi|227012713|gb|ACP08923.1| chemotaxis protein PomB [Vibrio cholerae O395] gi|229333779|gb|EEN99265.1| Flagellar motor rotation protein MotB [Vibrio cholerae 12129(1)] gi|229339089|gb|EEO04106.1| Flagellar motor rotation protein MotB [Vibrio cholerae bv. albensis VL426] gi|229339673|gb|EEO04688.1| Flagellar motor rotation protein MotB [Vibrio cholerae TM 11079-80] gi|229344664|gb|EEO09638.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC9] gi|229349901|gb|EEO14855.1| Flagellar motor rotation protein MotB [Vibrio cholerae TMA 21] gi|229350793|gb|EEO15734.1| Flagellar motor rotation protein MotB [Vibrio cholerae B33] gi|229357725|gb|EEO22642.1| Flagellar motor rotation protein MotB [Vibrio cholerae BX 330286] gi|229371176|gb|ACQ61599.1| Flagellar motor rotation protein MotB [Vibrio cholerae MJ-1236] gi|254843733|gb|EET22147.1| flagellar motor protein PomB [Vibrio cholerae MO10] gi|262032637|gb|EEY51190.1| Flagellar motor rotation protein MotB [Vibrio cholerae CT 5369-93] gi|297534594|gb|EFH73431.1| chemotaxis protein PomB [Vibrio cholerae RC385] gi|297543318|gb|EFH79368.1| flagellar motor protein PomB [Vibrio cholerae MAK 757] Length = 318 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 110/324 (33%), Gaps = 31/324 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 P L +W +AD M++LM FF+++ + D K I Sbjct: 5 QQCKCPPPGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 54 KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDR 113 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + G + + ++ ++ A ++++ +A+ I Sbjct: 114 AGGNQRDSGQLTGG---------QSAETSVQDNQNTQSEMQQQQAQAMSEQMETVAESIK 164 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 LS + + E I I I ++ F + S+ P+ ++++I E++ Sbjct: 165 KALSREIEQGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIAELVK 218 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 + + GHTD + R NW LS RA S Q + K R+ ++ G A Sbjct: 219 DIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRL-QVRGLADT 277 Query: 319 RLKIASDPMNSA--NRRIDILVED 340 + +D NRR++I + Sbjct: 278 QPLGPNDTEAQRATNRRVEISILQ 301 >gi|262274767|ref|ZP_06052578.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP 101886] gi|262221330|gb|EEY72644.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP 101886] Length = 309 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 111/321 (34%), Gaps = 42/321 (13%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 P L +W +AD M++LM FF+++ + D K I K F Sbjct: 8 PPPGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 56 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 QN E K I + + ++ + + + Sbjct: 57 VQNLLEVKDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRTLDFQEGESDRAGGAQ 116 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + + E G + + + ++ + ++ + Sbjct: 117 RDSAELEGGS-----------------------AASEASMQEMEQDTEQMSSVAQMVVQA 153 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V E ++I I + F S+ P+ ++++I +++ + Sbjct: 154 LEREVEEGAVEVENLGQQLIIRIREN---GAFPAGSAFLQPKFRPLVRQIADLVKDVPGI 210 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323 + + GHTD SP + R NW LS RA S Q + K G R+ ++ G A ++ Sbjct: 211 VRVSGHTDDSPLDSELYRSNWDLSAQRAVSVAQEMEKVEGFDPMRM-RVEGLAGSSPRVP 269 Query: 324 SDP--MNSANRRIDILVEDRQ 342 +D + NRR++I + + Sbjct: 270 NDTPENRAQNRRVEIAIMQGK 290 >gi|332187888|ref|ZP_08389621.1| ompA family protein [Sphingomonas sp. S17] gi|332012049|gb|EGI54121.1| ompA family protein [Sphingomonas sp. S17] Length = 297 Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 126/344 (36%), Gaps = 52/344 (15%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M E + +I+KK +A ++ G+WK+ YADF+T +MAFFL++W++ AT + Sbjct: 1 MARAPHGKNEPPKIVIVKKIIADGHGGHHGGAWKVAYADFVTAMMAFFLLLWLLGATTEK 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +K I YF P + + G K + V+ + G Sbjct: 61 QRKGIADYFAPTLLDTKSVGVGGGVLNGGAGVGRMQKDSSTAIVQTLVTRVNGQGGDKPG 120 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 L N + + + K L Sbjct: 121 TGNKGSLRNPDALARDQKTFDAVKREL--------------------------------- 147 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + V F T +G+ I ++D + MF Sbjct: 148 ------------------LRKMEVTPELKKLAQQVRFIPTDSGLRIDLVDNADYSMFSMG 189 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL 299 ++ P ++ I + +A I IRGHTD+ P+ + +NW LS RA + + L Sbjct: 190 TTSLEPAASQLIGTIAKTVADVPNTIMIRGHTDSVPYGDPRAMNNWMLSSGRAEATRRRL 249 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 G+ E R +I G A I +P + NRR+ I + R+G Sbjct: 250 AAGGLPESRFERIEGVADREPMITGNPSDPRNRRVAITLLYRKG 293 >gi|254225118|ref|ZP_04918732.1| chemotaxis protein PomB [Vibrio cholerae V51] gi|125622505|gb|EAZ50825.1| chemotaxis protein PomB [Vibrio cholerae V51] Length = 318 Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 110/324 (33%), Gaps = 31/324 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 P L +W +AD M++LM FF+++ + D K I Sbjct: 5 QQCKCPPPGLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 53 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 54 KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDR 113 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + G + + ++ ++ A ++++ +A+ I Sbjct: 114 AGGNQRDSGQLTGG---------QSAETSVQDSQNTQSEMQQQQAQAMSEQMETVAESIK 164 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 LS + + E I I I ++ F + S+ P+ ++++I E++ Sbjct: 165 KALSREIEQGA---IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIAELVK 218 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 + + GHTD + R NW LS RA S Q + K R+ ++ G A Sbjct: 219 DIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRL-QVRGLADT 277 Query: 319 RLKIASDPMNSA--NRRIDILVED 340 + +D NRR++I + Sbjct: 278 QPLGPNDTEAQRATNRRVEISILQ 301 >gi|192361715|ref|YP_001982600.1| hypothetical protein CJA_2135 [Cellvibrio japonicus Ueda107] gi|190687880|gb|ACE85558.1| hypothetical protein CJA_2135 [Cellvibrio japonicus Ueda107] Length = 294 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 120/326 (36%), Gaps = 62/326 (19%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + +D N W + YADF+T+L AFF+VM+ I+ + + + Q F K Sbjct: 3 RRRREDIHVNHERWLVSYADFITLLFAFFVVMYSISQVSESKYRVLSQTFVQAFK----- 57 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 ++ + + +T ++ + + Q + + + Q Sbjct: 58 ------------PTTDIQSNQEPAAQLTPSNDVITPVDLGKTAVEQVTNDEQVPIISDQA 105 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + L + +K L ++ + Sbjct: 106 PKDTTPQLEKP-----------------------------------VKTSDELAQISDLV 130 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + S L+ + + + + + I + D +F ++ P + +V+ +I +L Sbjct: 131 TEKFSQLIDEQL---IQVSSNELWLQIELKDS---ILFASGNADPSAQAMVIFDEISRIL 184 Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + I + G TD P + NW LS RA + ++L G++ +R++ + G+ Sbjct: 185 KNYSNPIQVEGFTDNVPINSARYPTNWELSSARASAIVKILASKGIAPERLAAV-GYGEF 243 Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342 + ++ + NRR+ I+V R+ Sbjct: 244 QPVASNATPEGRAQNRRVAIMVAKRK 269 >gi|313902670|ref|ZP_07836069.1| OmpA/MotB domain protein [Thermaerobacter subterraneus DSM 13965] gi|313467108|gb|EFR62623.1| OmpA/MotB domain protein [Thermaerobacter subterraneus DSM 13965] Length = 364 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 113/314 (35%), Gaps = 46/314 (14%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 W + YAD +T+L+AFF+VM+ ++ + +A+ TA + + D + Sbjct: 75 RWLLTYADLITLLLAFFVVMYAMSEVNAARYQALAASLRAAFA---TAGETLIDTEGISP 131 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 + + L+ D GS + Sbjct: 132 DARKVLDGLNRDTGQPYPPALPPAGSPEAPGEGS-------------------------- 165 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + + + + + ++ + ++R++ L ++++ L + Sbjct: 166 ------GEPSGEWPGLPGLPSPGQGAGTAVPPMSAEERERMEGLVERVNEALREA---GL 216 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 T G+ I DQ FD + PE +L+++ +LA I + GH Sbjct: 217 GGRASARLTERGVAIIFDDQ---VFFDLGRAELRPEGRDLLRRLAPILAQVPGTILVEGH 273 Query: 272 TDASPFR-NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM-- 327 TD P R NW LS RA + + L + G+ R+ +G+ R + + Sbjct: 274 TDNLPIRSGRYPSNWELSTARATTVVRYLAEQAGLDPRRL-AAAGYGEWRPRYPNTSAAN 332 Query: 328 NSANRRIDILVEDR 341 + NRR++I++ Sbjct: 333 RARNRRVEIVLLRP 346 >gi|170748396|ref|YP_001754656.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170654918|gb|ACB23973.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831] Length = 286 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 75/327 (22%), Positives = 129/327 (39%), Gaps = 56/327 (17%) Query: 15 IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 IIIKK ++ G+WKI YADF+T +MAFFL+MW+I+ T + K + +YF+P Sbjct: 4 IIIKKVKKAGHA-HHGGAWKIAYADFVTAMMAFFLLMWLISMTTQEQKIGLAEYFSPAAL 62 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + T+ G +D + ++ T + Sbjct: 63 SPATSGAGGILYG--------TALDTAGNKPSTPRDAE---------------------- 92 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 R S + + + T + + + + + ++ LQ Sbjct: 93 --------------RGSAEREVTARPTSPGLTSELDASRPVANVQANWSAIASLRQALQT 138 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + K ++ E T+ G+ +S++DQ MF + S P T VL+ Sbjct: 139 MPDIAE----------LSKNIVIEPTKEGVNVSLVDQDGRSMFREGSVEPYERTRRVLEA 188 Query: 255 IGEVLAHSTEVISIRGHTD-ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + L +SI G+T A P A + W LS RA + ++L +GV D S +S Sbjct: 189 LAPALRRMPNRLSITGYTAVARPGSARAGEPWSLSAGRALAVREILSGAGVPNDNFSAVS 248 Query: 314 GFAHHRLKIASDPMNSANRRIDILVED 340 G +P + NRR+ I + + Sbjct: 249 GRGDTEPVFPDNPYLAPNRRVTITLLN 275 >gi|134094523|ref|YP_001099598.1| flagellar motor protein MotB [Herminiimonas arsenicoxydans] gi|133738426|emb|CAL61471.1| Chemotaxis protein MotB (Motility protein B) [Herminiimonas arsenicoxydans] Length = 327 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 139/336 (41%), Gaps = 61/336 (18%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 E + II+K+ + G+WKI YADF+T +MAFFL+MW++ +T + I Y Sbjct: 3 DEGLRPIIVKRIKKSGGGHH-GGAWKIAYADFVTAMMAFFLLMWLLGSTTKGNLQGIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F+ K M G D + + ++ + + +N K Sbjct: 62 FSTPLKVAMAGGSGSGDATSVIKGGGKDMTRIDGQQKKGENLTPTK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 D E + ++E L L + A+ Sbjct: 108 ----------------------------SLNLKDAEAELERQEMNRLKSLKERIEEAIDS 139 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 L+ ++ L + T G+ I I+D++N PMF S + P T Sbjct: 140 IPSLRQYKNQL----------------LLDITSEGLRIQIVDEKNRPMFALSKADLQPYT 183 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 ++L +I + L IS+ GHTDA+P+ + NW LS DRA ++ + L+ G+ E Sbjct: 184 KLILHEIAKTLNDIPNRISLSGHTDATPYSSGEKSYSNWELSSDRANASRRELIAGGMEE 243 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G + L DP+N NRRI I+V +++ Sbjct: 244 AKMLRVVGLSSAVLFDQKDPLNPINRRISIIVMNKK 279 >gi|300024596|ref|YP_003757207.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526417|gb|ADJ24886.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 424 Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 92/421 (21%), Positives = 155/421 (36%), Gaps = 84/421 (19%) Query: 3 SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62 S+G ++ + +I++++ D ++ G WKI YADFMT +MAFFLVMW+INA D T Sbjct: 2 SNGQEDVSSQPLVIVRRR-RSHDEEHHGGVWKIAYADFMTAMMAFFLVMWLINAADKKTI 60 Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQN-------------------------PPERSSQNK 97 + YFNP + ++ N ++S+ Sbjct: 61 VQVAAYFNPMRLTDRFEAPKGLEDLNEIDAKQNEEKSEKGLSQHPDQAQKLSAPKASKAN 120 Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 I ++DE K S S +K+ +N L S+T S + Sbjct: 121 IGEAMDEEAQKRSASAGGKSAEAQKEEALFDNPGQLLDKLADEAKASQSMTAASPLDSSI 180 Query: 158 CKSTDLEKSINKEENYF---------------------------LPPLSKEKILAMKRKK 190 D + + + + K + Sbjct: 181 SDPFDRADRRSGKSSAAQRSASQPNPAPAAPPAATAKASPPPSGVEGKDAAKNARALEAQ 240 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-------------- 236 + A +++ A+ + + D ++ + Sbjct: 241 DTKQAATALNAKDQNHAANAPKPSDAADVADEAKAKKLQDDISSALAKGSRAAPEIEVKA 300 Query: 237 -----------------FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279 F+ S+ P P ++ + K+G+VL I +RGHTD+ ++N Sbjct: 301 TSEGLLVSLLDGADFGMFEVGSAKPRPALVLAMSKVGDVLKSLPGSIVVRGHTDSRAYKN 360 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 DNWRLS RA AY +L++ G++E R + I G A KI S+ NRRIDIL++ Sbjct: 361 GNYDNWRLSAARAQMAYYMLVRGGIAETRFAAIEGRADRDPKIPSNREAPENRRIDILIK 420 Query: 340 D 340 + Sbjct: 421 E 421 >gi|304311521|ref|YP_003811119.1| Chemotaxis protein MotB [gamma proteobacterium HdN1] gi|301797254|emb|CBL45474.1| Chemotaxis protein MotB [gamma proteobacterium HdN1] Length = 459 Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 75/333 (22%), Positives = 136/333 (40%), Gaps = 35/333 (10%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + ++ I+IK+ + G+WK+ +ADF+T +MA FLV+W+I +T K AI Sbjct: 2 ATADANKPIVIKRVKKYA-AGAHGGAWKVAFADFVTAMMALFLVLWLIESTTQAEKLAIS 60 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YF+ S + + D E ++ + + + Q Sbjct: 61 MYFSNPTGYTEGGSPFVVNLGG-------GMRDTDTIERVSSPAPPTQEPDVMPDRNIQP 113 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 L+N S + ++ + +++ Sbjct: 114 LDNI-------------------------QTNPSQEKSDLEKQQAEKQMQEQQLQEMHEQ 148 Query: 187 KRKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + + ++L + + + ++ + T G+LI ++D+ PMFD + Sbjct: 149 RETQEFEELKRALEEKIEADPTIGAFRDQIIIKITEDGLLIEVVDKDKRPMFDLGKTSVK 208 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGV 304 P +L+ I + L + +SI GHTDA PF NW LS DRA +A + L+K+G+ Sbjct: 209 PYFNSILKAIAKTLEGTHNPLSISGHTDAVPFTESENYTNWELSSDRANAARRALLKAGM 268 Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 +++I+++ G A L P NRRI IL Sbjct: 269 KKEQIARVVGLADSILFDEKHPDAPINRRISIL 301 >gi|319787078|ref|YP_004146553.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1] gi|317465590|gb|ADV27322.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1] Length = 323 Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 116/328 (35%), Gaps = 54/328 (16%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ ++ N+ +W I YAD MT+L+AFF+VM+ I+ ++ + + Sbjct: 3 RRKKHEEHGNH-EAWAIPYADLMTLLLAFFVVMYAISTLNEGKYRVLADALTAAF----- 56 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + +++G+ + Sbjct: 57 -------------------------GGAPRTINPVQVGNHQLQG-------------ADF 78 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 S R + L ++ +P ++ + +++L +A + Sbjct: 79 DRPSPIQSGARSGPSAPSPAPNPTLLPALASHMRTGVPVDVSDRATVQRAQRQLGTIAAR 138 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + LS LV + + + + I +FD S+ VL ++ +V Sbjct: 139 LEEALSPLVDARL---ITVRRAELWLEVEINSD---ILFDTGSASLDASARQVLSRLADV 192 Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + +GV+ +R++ + G+ Sbjct: 193 LRDTPNPVRVEGYTDDRPINTVQFPSNWELSAARAASVVHLFSANGVAPERLAMV-GYGE 251 Query: 318 HRLKIASDPMNS--ANRRIDILVEDRQG 343 HR + + NRR+ ++V G Sbjct: 252 HRPRADNLTEEGRNRNRRVVLIVLAAPG 279 >gi|283133065|dbj|BAI63831.1| flagellar motor protein MotB [Pseudomonas syringae pv. tabaci] Length = 341 Score = 172 bits (434), Expect = 9e-41, Method: Composition-based stats. Identities = 83/335 (24%), Positives = 132/335 (39%), Gaps = 65/335 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W++++ + A+ YF Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 D + S IDL ++ N T Sbjct: 61 K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTPNPEVKTTPSPDT----- 101 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 L + E + Sbjct: 102 -------------------------------------------VPLEAETSETKAEEVEQ 118 Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYF 178 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 179 EDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPDS 238 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 239 QVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273 >gi|114570105|ref|YP_756785.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10] gi|114340567|gb|ABI65847.1| OmpA/MotB domain protein [Maricaulis maris MCS10] Length = 307 Score = 172 bits (434), Expect = 9e-41, Method: Composition-based stats. Identities = 77/311 (24%), Positives = 131/311 (42%), Gaps = 41/311 (13%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD-EQNPP 90 +WK+ YADF+T +MAFFL+MW+IN T + K+ I YF P + + G +P Sbjct: 25 AWKVAYADFVTAMMAFFLLMWLINTTTPEQKRGIADYFAPASVSPSNSGSGAPLAGTSPG 84 Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 + Q D S + + + L + + + Sbjct: 85 DDGVQGSGDSSQRQRLAPTAPQLN-----------------------DRDRQQTPEGSPE 121 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + + ++ + ++ + + L S AM+ L +L+ Sbjct: 122 AVESVTEITASAMAEAQQRRDAAELHSASMSLRQAMQEMPELAELSN------------- 168 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 VL + T G+ I +IDQ PMFD ++ P + +L+ + + +S+ G Sbjct: 169 ---HVLIDETPEGLRIQLIDQEGRPMFDPGATRPNERAVTLLRAVARIAERLPNRLSVAG 225 Query: 271 HTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 HTD++P NW LS DRA +A VL ++G+S+DRI ++ G A DP Sbjct: 226 HTDSAPAAPGADYTNWELSADRANAARSVLQRAGISDDRIYEVRGKAGSEPLYPDDPYMP 285 Query: 330 ANRRIDILVED 340 NRRI +++ Sbjct: 286 GNRRISVVLLR 296 >gi|283785634|ref|YP_003365499.1| chemotaxis protein MotB (motility protein B) [Citrobacter rodentium ICC168] gi|282949088|emb|CBG88694.1| chemotaxis protein MotB (motility protein B) [Citrobacter rodentium ICC168] Length = 309 Score = 172 bits (434), Expect = 9e-41, Method: Composition-based stats. Identities = 80/334 (23%), Positives = 127/334 (38%), Gaps = 71/334 (21%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +++K++ A GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 5 SHPIVVVKRRKAKGHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFR 64 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 +T D ++P + + H N +LK Sbjct: 65 TPLATAVTGGHRFSDSESPIPGGGDDFTQQKGEVHKQPNIDELK---------------- 108 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + E L L + ++ Sbjct: 109 -------------------------------------KRMEQSRLSKLRGDLDQLIESDP 131 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L+ L + L G+ I IID +N PMF S+ P Sbjct: 132 KLRALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSAEVEPYMRD 175 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + L++ G+ + + Sbjct: 176 ILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELVQGGLDDGK 235 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ G A P ++ NRRI +LV +RQ Sbjct: 236 VLRVVGMAATMRLSDRGPEDAVNRRISLLVLNRQ 269 >gi|302189799|ref|ZP_07266472.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae 642] Length = 349 Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W++++ + A+ YF Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128 D + S IDL ++ N +++ ++ +T Sbjct: 61 K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + E Sbjct: 103 ---------------------------------------------PIETETAETKAEAVE 117 Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 118 QERLEMLLQELQNKVQENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPY 177 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + + + +SI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 178 FEDILLALADTIKSVPNKVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPD 237 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V R+ Sbjct: 238 SQVARVVGYASSALYDHQNPTNPINRRIDIVVLTRK 273 >gi|253996630|ref|YP_003048694.1| flagellar motor protein MotB [Methylotenera mobilis JLW8] gi|253983309|gb|ACT48167.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8] Length = 312 Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 84/337 (24%), Positives = 147/337 (43%), Gaps = 61/337 (18%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 +E + II+K K+ ++ G+WKI YADF+T +MAFFL+MW++ +T K+ I +Y Sbjct: 3 EELRKPIIVK-KIKKGGGGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKAQKEGISEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K + + +S I + +TK +K Sbjct: 62 FKTPLKVALMGGDSV--------GASDTLIKGGGGKDMTKKQGQVKPVDG---------- 103 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + + L Sbjct: 104 ---------------------------------------PPGKQKAVDIKDAKAALEKAE 124 Query: 189 KKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +++L+ L +KI ++ K +L + T G+ I I+D++N PMF+ + + P Sbjct: 125 EQKLELLKEKIEKSIEDSPTLSKFKKQLLIDITTEGLRIQIVDEQNRPMFESAKAEMQPY 184 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG++L T IS+ GHTDA+P+ + NW LS DRA ++ + L+ G+ Sbjct: 185 AKQILKEIGQMLNGVTNKISLSGHTDAAPYSSGEKGYSNWELSSDRANASRRELIAGGMD 244 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G + L DP+N NRRI I+V ++Q Sbjct: 245 EAKLLRVVGLSSVSLFDKDDPLNPINRRISIIVMNKQ 281 >gi|88859188|ref|ZP_01133829.1| flagellar motor protein [Pseudoalteromonas tunicata D2] gi|88819414|gb|EAR29228.1| flagellar motor protein [Pseudoalteromonas tunicata D2] Length = 290 Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 63/313 (20%), Positives = 117/313 (37%), Gaps = 38/313 (12%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 +AD M++LM FF+++ ++ D K I K F QN E Sbjct: 1 MGTFADLMSLLMCFFVLLLAMSEMDVLKFKQIAGSM-----------KFAFGVQNKLEVK 49 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 K I D T Q++ + + + + + ++S + + Sbjct: 50 DIPKGTSVIAMEFRPGKPDPSPIETIQQQTSEMTQQMLEFQAGDEESAGGRQEQRGNKRG 109 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 G E+ ++++ +L KKI+ L + D Sbjct: 110 G----------------ESQSTAKSEAAASEKTADQEQVNELVKKIAQQLEEQIQDGA-- 151 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 + E+ I+I I + F S+ P+ ++QKI ++L I++ GHTD Sbjct: 152 -IELESLGQQIIIRIREN---GSFPSGSAFLQPQFKPIIQKIADLLKDVPGEITVSGHTD 207 Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNS-- 329 N +NW LS R+ + + K SG ++R+ + G A R + ++ S Sbjct: 208 DYQVSNELYFNNWDLSAKRSVAVASEMQKVSGFDKNRMV-VIGHADTRPLVPNEDSESRK 266 Query: 330 ANRRIDILVEDRQ 342 NRR++I + + Sbjct: 267 RNRRVEISIMQGK 279 >gi|153836044|ref|ZP_01988711.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ3810] gi|149750798|gb|EDM61543.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ3810] Length = 330 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 124/331 (37%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ A + G+WK+ +ADFM LMA FLV+W++ D + +KAI + + Sbjct: 3 KQEHVVFKRAKAHGHDEPHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + Q S + IDL+ D + + S+ + E N Sbjct: 63 SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSYFQGDGDGPEIN 116 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ Sbjct: 117 SLVPGT-------------------------------------------------FDTQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK I + + N V T G+ I + D MF + + P Sbjct: 128 QLAALAKVIEEMTAQI---NAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + T + I GHTDA PF+ + NW LS RA A + L++ G+ +DR Sbjct: 185 LLLALAPLFEQVTNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARKTLVEGGMPDDR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L +P +S NRRI++ + Sbjct: 245 VMQVTGMSDRALLNPDEPDSSENRRIELFIL 275 >gi|91793918|ref|YP_563569.1| flagellar motor protein MotB [Shewanella denitrificans OS217] gi|91715920|gb|ABE55846.1| OmpA/MotB [Shewanella denitrificans OS217] Length = 318 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 115/325 (35%), Gaps = 36/325 (11%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 P W +AD M++LM FF+++ D K I K Sbjct: 5 KCVCPPVGAPLWLATFADLMSLLMCFFVLLLSFAEMDVMKFKQIAGSM-----------K 53 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 F QN E K I D ++ + + I Y + S Sbjct: 54 YAFGVQNKVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTQQTIEYQAGEDDSA 113 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + G+ + + ++ E + ++ + + KK++ Sbjct: 114 GGVQKQQGEQRGGEASATAQETAEAKKSESSSS--------------QENINEQVKKMAE 159 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L+ + D + E+ I+I I ++ F S P+ V++ IG +L Sbjct: 160 QLNEEIVDGA---IEIESLGQQIIIRIREK---GSFASGSGFLQPKFKPVIRSIGSLLKD 213 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 +I++ GHTD N NW LS RA + M+ G E R+ + G A + Sbjct: 214 VPGIITVAGHTDGMHISNELYSSNWDLSSARAVAVAHEFMRVPGFDETRMK-VVGMASND 272 Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342 ++++ S NRR++I +E + Sbjct: 273 QLVSNESSENRSQNRRVEITIEQGK 297 >gi|146305234|ref|YP_001185699.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp] gi|145573435|gb|ABP82967.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 313 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 74/344 (21%), Positives = 122/344 (35%), Gaps = 63/344 (18%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G + E II+K++ + G+WK+ +ADF +MA F+V+WII + Sbjct: 1 MRKRGGEEHE----IIVKRRSKKGGHDEHGGAWKVAFADFTMAMMALFMVLWIIQPQNQQ 56 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +A GIFD + V + Sbjct: 57 QSRADADQLTNPLV---EGGAGIFDGSSRTPLDLDG------------VPVQVSPRKDRD 101 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + E+ L Q E + + + L ++ E N Sbjct: 102 NQARTPQEDPGATLGEGQPGEPRRPHYAEPGQMQELAELLEQLALQLDAEAN-------- 153 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + G+ I I D MF + Sbjct: 154 ----------------------------------IEVQVVPQGLRILIKDDAQRFMFSRG 179 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQV 298 S+ P +LQ++ +LA + I GHTD++P+R +NW LS DRA A V Sbjct: 180 SARLDPHFEKLLQRLAGILAKVDNHLIISGHTDSTPYRGVVGGYNNWNLSGDRALRARNV 239 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 L+++G+ + +++ A + SDP N ANRRI++L+ Q Sbjct: 240 LVEAGLPTSAVLQVTAQADGMPLLPSDPQNGANRRIELLLLTSQ 283 >gi|28901412|ref|NP_801067.1| chemotaxis LafU protein [Vibrio parahaemolyticus RIMD 2210633] gi|260362966|ref|ZP_05775835.1| chemotaxis protein LafU [Vibrio parahaemolyticus K5030] gi|260880253|ref|ZP_05892608.1| chemotaxis protein LafU [Vibrio parahaemolyticus AN-5034] gi|260895370|ref|ZP_05903866.1| chemotaxis protein LafU [Vibrio parahaemolyticus Peru-466] gi|1346409|sp|Q03478|LAFU_VIBPA RecName: Full=Chemotaxis protein LafU gi|677910|gb|AAA62355.1| LafU [Vibrio parahaemolyticus] gi|1518954|gb|AAB07358.1| lateral flagellar MotB [Vibrio parahaemolyticus] gi|28809959|dbj|BAC62900.1| chemotaxis LafU protein [Vibrio parahaemolyticus RIMD 2210633] gi|308085707|gb|EFO35402.1| chemotaxis protein LafU [Vibrio parahaemolyticus Peru-466] gi|308092138|gb|EFO41833.1| chemotaxis protein LafU [Vibrio parahaemolyticus AN-5034] gi|308111945|gb|EFO49485.1| chemotaxis protein LafU [Vibrio parahaemolyticus K5030] Length = 330 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 124/331 (37%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ A + G+WK+ +ADFM LMA FLV+W++ D + +KAI + + Sbjct: 3 KQEHVVFKRAKAHGHDEPHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + Q S + IDL+ D + + S+ + E N Sbjct: 63 SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSYFQGDGDGPEIN 116 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ Sbjct: 117 SLVPGT-------------------------------------------------FDTQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK I + + N V T G+ I + D MF + + P Sbjct: 128 QLAALAKVIEEMTAQI---NAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + T + I GHTDA PF+ + NW LS RA A + L++ G+ +DR Sbjct: 185 LLLALAPLFEQVTNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARKTLVEGGMPDDR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L +P +S NRRI++ + Sbjct: 245 VMQVTGMSDRALLNPDEPDSSENRRIELFIL 275 >gi|148359858|ref|YP_001251065.1| hypothetical protein LPC_1786 [Legionella pneumophila str. Corby] gi|296107908|ref|YP_003619609.1| chemotaxis protein MotB [Legionella pneumophila 2300/99 Alcoy] gi|148281631|gb|ABQ55719.1| hypothetical protein LPC_1786 [Legionella pneumophila str. Corby] gi|295649810|gb|ADG25657.1| chemotaxis protein MotB [Legionella pneumophila 2300/99 Alcoy] Length = 312 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 83/331 (25%), Positives = 138/331 (41%), Gaps = 63/331 (19%) Query: 14 FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 II +K+ +D ++ GSWKI YADF+T +MAFFL+MW++ + + K I +YF Sbjct: 32 PII--RKIKKNDHKHHGGSWKIAYADFVTAMMAFFLLMWLVASLNKAQKAGIAEYFKQPM 89 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 K + + + + + + N D T + + + ++ Sbjct: 90 KMALFGGESMGNRKATIKGGGPNIEDTDGQVSATNKPLINESIAKDK------------- 136 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 E L L E L+M++ L Sbjct: 137 -----------------------------EIVESQANEIKKLEELKSEINLSMEKDPSLA 167 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 L K++ L + G+ I +ID + PMFD S PE +L Sbjct: 168 GLKKQL----------------LMDVVSDGLRIQLIDNQKKPMFDVGSDKINPEIEPILA 211 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 I ++L I+I+GHTDA+P+ N NW LS RA +A + L+K+G+ E+++ Sbjct: 212 NIAKLLNSVPNKITIQGHTDANPYHNPEELEYTNWELSAQRANAARRALIKAGMDENKVM 271 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G++ L +P N NRRI I+V + Sbjct: 272 TVTGYSSTVLLDKKNPYNPENRRISIIVMKK 302 >gi|83858208|ref|ZP_00951730.1| chemotaxis MotB protein [Oceanicaulis alexandrii HTCC2633] gi|83853031|gb|EAP90883.1| chemotaxis MotB protein [Oceanicaulis alexandrii HTCC2633] Length = 303 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 86/332 (25%), Positives = 139/332 (41%), Gaps = 42/332 (12%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 +DQ I+IKK ++ G+WK+ YADF+T +MAFFL+MW+IN T+ + ++ I YF Sbjct: 2 SSDQPIVIKKVKKGGGHGHHGGAWKVAYADFVTAMMAFFLMMWLINNTEPEQRQGIADYF 61 Query: 70 NPFGKNLMT-ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 P + T S G+ + + ++ SI E + S + Sbjct: 62 APASVSRTTSGSGGVLGGTSFGDDGARGSGSSSIVERLAPRSEQDVSREQEADQ------ 115 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + G+ S L ++ + E + A++ Sbjct: 116 -------------------ASGAAGGQPEASSDALASAVARREAAQFASAEQSLRQALQD 156 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 L +L + VL E T G+ I +IDQ PMF+ + P Sbjct: 157 MPELAEL----------------SRHVLIEETPEGLRIQLIDQEGRPMFEPGAIEPNSRA 200 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 V+L+ I E++ I+I GHTDASP NW LS RA +A ++ ++G+ + R Sbjct: 201 RVLLRTISEIVLRLPNRITISGHTDASPAPVGGVSNWELSSARANAALNIMTEAGIPDHR 260 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 I+++ G A DP NRR+ I + Sbjct: 261 IAEVRGKAGAEPLFPDDPYLPGNRRLSITLLR 292 >gi|320321894|gb|EFW77990.1| flagellar motor protein MotB [Pseudomonas syringae pv. glycinea str. B076] gi|320331001|gb|EFW86975.1| flagellar motor protein MotB [Pseudomonas syringae pv. glycinea str. race 4] gi|330872240|gb|EGH06389.1| flagellar motor protein MotB [Pseudomonas syringae pv. glycinea str. race 4] Length = 341 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W++++ + A+ YF Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128 D + S IDL ++ N +++ ++ +T Sbjct: 61 K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 L + E Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117 Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 238 SQVARVVGYASSALYDYENPTNPVNRRIDIVVLTKK 273 >gi|257482421|ref|ZP_05636462.1| flagellar motor protein MotB [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331009754|gb|EGH89810.1| flagellar motor protein MotB [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 341 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W++++ + A+ YF Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128 D + S IDL ++ N +++ ++ +T Sbjct: 61 K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 L + E Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117 Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273 >gi|330984570|gb|EGH82673.1| flagellar motor protein MotB [Pseudomonas syringae pv. lachrymans str. M301315] Length = 344 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W++++ + A+ YF Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128 D + S IDL ++ N +++ ++ +T Sbjct: 61 K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 L + E Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117 Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273 >gi|298484924|ref|ZP_07003023.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160611|gb|EFI01633.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 341 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W++++ + A+ YF Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128 D + S IDL ++ N +++ ++ +T Sbjct: 61 K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 L + E Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117 Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273 >gi|289648637|ref|ZP_06479980.1| flagellar motor protein MotB [Pseudomonas syringae pv. aesculi str. 2250] Length = 350 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W++++ + A+ YF Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128 D + S IDL ++ N +++ ++ +T Sbjct: 61 K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 L + E Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117 Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273 >gi|289623746|ref|ZP_06456700.1| flagellar motor protein MotB [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330865884|gb|EGH00593.1| flagellar motor protein MotB [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 344 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W++++ + A+ YF Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128 D + S IDL ++ N +++ ++ +T Sbjct: 61 K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 L + E Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117 Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273 >gi|121611336|ref|YP_999143.1| OmpA/MotB domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121555976|gb|ABM60125.1| OmpA/MotB domain protein [Verminephrobacter eiseniae EF01-2] Length = 327 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 131/340 (38%), Gaps = 67/340 (19%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ Q II+++ ++G+WKI YADF+T +MAFFL++W++ +T + I Y Sbjct: 10 EKKLQPIIVRRVHRAAPAG-HMGTWKIAYADFVTAMMAFFLLLWLLGSTAKGDLQEIAAY 68 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F M + G + + + E +TK + Q + Sbjct: 69 FAAPLGASMVGTDGA---------GRSSSVIPAGGEDLTKALGQSRRSGAQASGQRRIGL 119 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + +++ + L + M Sbjct: 120 D-----------------------------------AEYARQDRQRIEALRAKFDALMAS 144 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL + +I T G+ I IID++N PMFD S+ LP Sbjct: 145 NPRLNEYRSQIR----------------IRITPDGLQIQIIDEQNRPMFDSGSARVLPHM 188 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFR------NIARDNWRLSLDRAYSAYQVLMKS 302 +L IG L IS+ GHTDA P+ NW LS DRA ++ + L+ + Sbjct: 189 RDILHAIGAALGGVKNRISLAGHTDAVPYGKYGPHDEPGYSNWELSADRANASRRELVSA 248 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 G+ +D++ ++ G A DP+ ANRRI I V + Sbjct: 249 GMPDDQLGRVVGLAASDPLAPDDPLAPANRRISITVLTHE 288 >gi|330886588|gb|EGH20249.1| flagellar motor protein MotB [Pseudomonas syringae pv. mori str. 301020] Length = 341 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W++++ + A+ YF Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128 D + S IDL ++ N +++ ++ +T Sbjct: 61 K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 L + E Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117 Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273 >gi|54298209|ref|YP_124578.1| flagellar motor protein MotB [Legionella pneumophila str. Paris] gi|53751994|emb|CAH13420.1| hypothetical protein lpp2267 [Legionella pneumophila str. Paris] Length = 312 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 82/334 (24%), Positives = 138/334 (41%), Gaps = 63/334 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 II +K+ +D ++ GSWKI +ADF+T +MAFFL+MW++ + + K I +YF Sbjct: 29 QYTPII--RKIKKNDHKHHGGSWKIAFADFVTAMMAFFLLMWLVASLNKAQKAGIAEYFK 86 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 K + + + + + + N D T + + + ++ Sbjct: 87 QPMKVALFGGESMGNRKATIKGGGPNIEDTDGQVSATNKPLINESIAKDK---------- 136 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 E L L E L+M++ Sbjct: 137 --------------------------------EIIESQANEIKKLEELKSEINLSMEKDP 164 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L L K++ L + G+ I +ID + PMFD S PE Sbjct: 165 SLAGLKKQL----------------LMDVVSDGLRIQLIDNQKKPMFDVGSDKINPEIEP 208 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSLDRAYSAYQVLMKSGVSED 307 +L I ++L I+I+GHTDA+P+ N NW LS RA +A + L+K+G+ E+ Sbjct: 209 ILANIAKLLNSVPNKITIQGHTDANPYHNPEELEYTNWELSAQRANAARRALIKAGMDEN 268 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ ++G++ L +P N NRRI I+V + Sbjct: 269 KVMTVTGYSSTVLLDKKNPYNPENRRISIIVMKK 302 >gi|157959885|ref|YP_001499919.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC 700345] gi|157844885|gb|ABV85384.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345] Length = 336 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 44/329 (13%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + IIIK+K + G+WK+ +ADF +MAFF+V+WII D + I ++ Sbjct: 4 RPEPIIIKRKRRGKPRKGHAGAWKVAFADFTLAMMAFFMVLWIIQIADQQERTVIAKHIQ 63 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 G S FD + P L + +T L S+ + L N Sbjct: 64 --GDLFEAGSINPFDLSSSPS-------MLDFEGQMTIQEPVLPTSSSGAGTRGPALHNR 114 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 I N+ ++ P L+ + + Sbjct: 115 IPEGENNAKAGKG--------------------------------PELNAMLPGKFETQA 142 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L+ LA++I + + + V + G+ I + D N MF + SS P Sbjct: 143 QLEVLAREIDRVIEDVS---MSANVKLQVVPQGVRILMHDNINKFMFTRGSSEMKPYFED 199 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L +G VL+ +SI GHTD++PF NW LS RA A +VL +GV +++ Sbjct: 200 LLMALGPVLSKVENKMSISGHTDSTPFIGKTFTNWELSSKRALLARRVLGYAGVKNNQVL 259 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVE 339 +++G A I+ DP +ANRRI++++ Sbjct: 260 QVTGMADQAPYISHDPAAAANRRIEMIIM 288 >gi|90408165|ref|ZP_01216333.1| flagellar motor protein [Psychromonas sp. CNPT3] gi|90310695|gb|EAS38812.1| flagellar motor protein [Psychromonas sp. CNPT3] Length = 299 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 114/323 (35%), Gaps = 43/323 (13%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 P L +W +AD M++LM FF+++ + D K I K Sbjct: 6 CKCPPEGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KF 54 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 F Q+ E K I + T D +K + E + + Sbjct: 55 AFGVQSMLEVKDIPKGTSVIAQEFTPGRPDPTPIEVIMQKTIEMTEAKLDFSEGD----- 109 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 S D E+ + + + K +A + + +Q+ A +I S Sbjct: 110 ---SSRADGEEDSKEDIPEEGNQGNEQSSEASEAQHQLAKAVAQELQDEIQEGAIEIESL 166 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++I I ++ F S+ P V++K+ ++LA Sbjct: 167 GQQ------------------LIIRIREK---GAFPSGSAFLQPRFRPVIRKVAKILADI 205 Query: 263 TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 VI+I GHTD + R NW LS RA S ++K ++ ++G+A+ + Sbjct: 206 PGVITISGHTDNEQVHSELYRSNWDLSAQRAVSVAHEMLKIKKIRNKHLVVAGYANSKPL 265 Query: 322 IASD--PMNSANRRIDILVEDRQ 342 S NRR++I++ + Sbjct: 266 TDSKILSERKRNRRVEIMIMQGE 288 >gi|331663388|ref|ZP_08364298.1| chemotaxis protein MotB [Escherichia coli TA143] gi|331059187|gb|EGI31164.1| chemotaxis protein MotB [Escherichia coli TA143] Length = 366 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 75/342 (21%), Positives = 122/342 (35%), Gaps = 71/342 (20%) Query: 3 SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62 + + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + Sbjct: 54 DNRGSMKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKEL 113 Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 I +YF +T I + ++P + + + N +LK Sbjct: 114 IQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------- 165 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + E L L + Sbjct: 166 ---------------------------------------------KRMEQSRLRKLRGDL 180 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 ++ +L+ L + L V + + ++ PMF S+ Sbjct: 181 DQLIESDPKLRALRPHLKIDL---VQEGLRIQIIDSQN-------------RPMFRTGSA 224 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLM 300 P +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM Sbjct: 225 DVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELM 284 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 G+ ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 285 VGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 326 >gi|71737470|ref|YP_272857.1| flagellar motor protein MotB [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558023|gb|AAZ37234.1| motility protein, MotA family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 341 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 67/336 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W++++ + A+ YF Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128 D + S IDL ++ N +++ ++ +T Sbjct: 61 K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 L + E Sbjct: 103 ---------------------------------------------PLEAETSETKAEEVE 117 Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPY 177 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 178 FEDILLAMADTIKSVPNKISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPD 237 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 238 SQVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273 >gi|190572619|ref|YP_001970464.1| flagellar motor protein MotB [Stenotrophomonas maltophilia K279a] gi|190010541|emb|CAQ44150.1| putative chemotaxis protein [Stenotrophomonas maltophilia K279a] Length = 312 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 78/334 (23%), Positives = 141/334 (42%), Gaps = 59/334 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN +I+++ ++ GSWK+ YADF+T +MAFFLV+W++ T+ + + AI +YF Sbjct: 3 ENKPTVIVRRVKKAGHAAHHGGSWKVAYADFVTAMMAFFLVLWLMATTNKNDRAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 ++ T G + Sbjct: 63 RNP--------------------------SPLSGQNATPAPGMAGPGGASTSMIKLGGAT 96 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 +I +++ ++ K ++ + + + K Sbjct: 97 DISRGNSNDPFQNQKEAVPQPVD-------------------------------QQQRDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++L+ L K++ + + +L + T G+ I I+D++N PMFD S+ P T Sbjct: 126 QQLEALMKELQEAISRSQALEPFKDQLLLDLTPEGLRIQIVDKQNRPMFDLGSATLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L ++ E L H IS+ GHTD + + NW LS DRA +A + L+ G+ + Sbjct: 186 QQILHELAEYLNHVPNRISLTGHTDITAYSAARGYGNWELSADRANAARRALVDGGLEDS 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +I+++ G + L +DP N NRRI I+V + Sbjct: 246 KITRVVGLSSSVLFDKTDPQNPINRRISIVVMTK 279 >gi|328469346|gb|EGF40292.1| chemotaxis LafU protein [Vibrio parahaemolyticus 10329] Length = 330 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 124/331 (37%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ A + G+WK+ +ADFM LMA FLV+W++ D + +KAI + + Sbjct: 3 KQEHVVFKRAKAHGHDEPHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + Q S + IDL+ D + + S+ + E N Sbjct: 63 SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSYFQGDGDGPEIN 116 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ Sbjct: 117 SLVPGT-------------------------------------------------FDTQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK I + + N V T G+ I + D MF + + P Sbjct: 128 QLAALAKVIEEMTAQI---NAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + T + I GHTDA PF+ + NW LS RA A + L++ G+ +DR Sbjct: 185 LLLALAPLFERVTNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARKTLVEGGMPDDR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L +P +S NRRI++ + Sbjct: 245 VMQVTGMSDRALLNPDEPDSSENRRIELFIL 275 >gi|74311761|ref|YP_310180.1| flagellar motor protein MotB [Shigella sonnei Ss046] gi|73855238|gb|AAZ87945.1| MotB [Shigella sonnei Ss046] Length = 308 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 79/336 (23%), Positives = 124/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N DLK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEDLK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + + ID +N PMF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQI-------------IDSQNRPMFRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRVIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|114330218|ref|YP_746440.1| flagellar motor protein MotB [Nitrosomonas eutropha C91] gi|114307232|gb|ABI58475.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91] Length = 314 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 74/319 (23%), Positives = 129/319 (40%), Gaps = 60/319 (18%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 ++ G+WKI YADF+T +MAFFL+MW++ +T K+ I +YF K + G D Sbjct: 20 GQHHGGAWKIAYADFVTAMMAFFLLMWLLGSTTQGDKEGISEYFKMPLKVALLGGDGSGD 79 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 + + + Sbjct: 80 STSVIKGGGDDLSRRIGQ------------------------------------------ 97 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 D K + E+ K K R++D + S Sbjct: 98 ----------MRRSDFDDLKQSLDMDALQTLQDRVEREQLEKLKARIED------AINSN 141 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 V + +L + T G+ I I+D++N PMF + P T ++L +IG++L Sbjct: 142 PVLNKFKSQLLLDITSEGLRIQIVDEKNRPMFAIGKAELQPYTKMILHEIGKMLNDVGNK 201 Query: 266 ISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 IS+ GHTDA+P+ + NW LS DRA ++ + L+ G++ +++ ++ G + + Sbjct: 202 ISLSGHTDATPYPSGEKSYSNWELSADRANASRRELIAGGMNPEKMLRVVGLSSAVMFDK 261 Query: 324 SDPMNSANRRIDILVEDRQ 342 D + NRRI I+V +++ Sbjct: 262 EDSFSPFNRRISIIVMNKK 280 >gi|294339857|emb|CAZ88220.1| putative outer membrane OmpA/MotB protein [Thiomonas sp. 3As] Length = 293 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 107/325 (32%), Gaps = 76/325 (23%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K + Q Sbjct: 3 RKKAHEEHENHERWLVSYADFITLLFAFFVVMYSISSLNEGKYKVLSQ------------ 50 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 I + T N V + + + Sbjct: 51 ----------------TMIAAFTGQPTTPNPVQVGQPFNSMPSAIDLPPIPKQQKPEIIE 94 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 A + +K LQ +A+KI Sbjct: 95 PGRGGPG--------------------------------------AKEVQKTLQGVAEKI 116 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L+ + V T G++I I D +F + P+ +L +I VL Sbjct: 117 QTLLASAIRKG---DVRVRMTPLGVVIDIHDT---VLFASGQAALTPQAQDLLNQIAGVL 170 Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I + G TD P NW LS RA S ++ ++ GV +++ G+ + Sbjct: 171 QGVAYPIQVNGFTDDRPINTPQFGSNWALSSARAVSVVEMFIEQGVKPEQLVAA-GYGQY 229 Query: 319 RLKIASDPM--NSANRRIDILVEDR 341 ++D +ANRR+ +++ Sbjct: 230 HPVESNDTAKGRAANRRVSVVIVSP 254 >gi|260779337|ref|ZP_05888229.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC BAA-450] gi|260605501|gb|EEX31796.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC BAA-450] Length = 330 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 73/331 (22%), Positives = 123/331 (37%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ +DD + G+WK+ +ADFM LMA FLV+W++ D + +KAI + Sbjct: 3 RQEQVVFKRTKTVDDDEFHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLQ 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + Q S + IDL+ D + I S+ + + Sbjct: 63 SASVFDKSYGNPFDTSQ------SISPIDLAADSSVPSRHDSTHIVSSFFQGDGE----- 111 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 P ++ Sbjct: 112 --------------------------------------------GPETDSLIPGTFDTQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 RL LAK I + + A V T G+ I + D MF + S P Sbjct: 128 RLAALAKVIKEAVRQISAQG---NVNVTVTPQGLRIVLQDDYKQHMFGRGGSELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + V + I GHTD++ F+ R NW LS RA +A L+ G+ ++R Sbjct: 185 LLLALAPVFKRVENPLIISGHTDSTRFKGHVERRSNWELSASRANAARHTLVAGGMPDER 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L +P +S NRRI++ + Sbjct: 245 VLQVTGMSDRALLNGDEPESSENRRIELFIL 275 >gi|16760871|ref|NP_456488.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141437|ref|NP_804779.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213163277|ref|ZP_03348987.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213622329|ref|ZP_03375112.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|25298889|pir||AF0746 motility protein B [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503168|emb|CAD05673.1| motility protein B [Salmonella enterica subsp. enterica serovar Typhi] gi|29137064|gb|AAO68628.1| motility protein B [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 309 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 73/333 (21%), Positives = 120/333 (36%), Gaps = 71/333 (21%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 +++K++ GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 6 HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 +T I + ++P + + N +LK Sbjct: 66 PLATAVTGGNRIANSKSPIPGGGDDYTQQQGEVEKQPNIDELK----------------- 108 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + E L L + ++ + Sbjct: 109 ------------------------------------KRMEQSRLNKLRGDLDQLIESDPK 132 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L+ L + L V + + ++ R MF S+ P + Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMRDI 176 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L+ I VL IS+ GHTD P+ N NW LS DRA ++ + L+ G+ ++ Sbjct: 177 LRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKV 236 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ G A P ++ NRRI +LV ++Q Sbjct: 237 LRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 269 >gi|16765264|ref|NP_460879.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56413159|ref|YP_150234.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62180499|ref|YP_216916.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613518|ref|YP_001587483.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552438|ref|ZP_02346191.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994228|ref|ZP_02575320.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168238556|ref|ZP_02663614.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168241555|ref|ZP_02666487.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168259799|ref|ZP_02681772.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168462543|ref|ZP_02696474.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820750|ref|ZP_02832750.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444100|ref|YP_002041189.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450845|ref|YP_002045977.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472145|ref|ZP_03078129.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737421|ref|YP_002114959.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248088|ref|YP_002146098.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264977|ref|ZP_03165051.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362085|ref|YP_002141722.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243979|ref|YP_002215160.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390054|ref|ZP_03216665.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204931026|ref|ZP_03221852.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352375|ref|YP_002226176.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856557|ref|YP_002243208.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224583574|ref|YP_002637372.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912501|ref|ZP_04656338.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|2494511|sp|P55892|MOTB_SALTY RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein MotB gi|1764128|gb|AAC45266.1| MotB [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420459|gb|AAL20838.1| enables flagellar motor rotation [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56127416|gb|AAV76922.1| motility protein B [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62128132|gb|AAX65835.1| enables flagellar motor rotation, linking torque machinery to cell wall [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362882|gb|ABX66650.1| hypothetical protein SPAB_01238 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402763|gb|ACF62985.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409149|gb|ACF69368.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458509|gb|EDX47348.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712923|gb|ACF92144.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195634203|gb|EDX52555.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197093562|emb|CAR59024.1| motility protein B [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197211791|gb|ACH49188.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243232|gb|EDY25852.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288646|gb|EDY28021.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938495|gb|ACH75828.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602499|gb|EDZ01045.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320070|gb|EDZ05275.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205272156|emb|CAR37011.1| motility protein B [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322895|gb|EDZ10734.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327891|gb|EDZ14655.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339183|gb|EDZ25947.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342679|gb|EDZ29443.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350979|gb|EDZ37610.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708360|emb|CAR32664.1| motility protein B [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468101|gb|ACN45931.1| flagellar motor protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247092|emb|CBG24913.1| motility protein B [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993909|gb|ACY88794.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158442|emb|CBW17951.1| motility protein B [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912916|dbj|BAJ36890.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085458|emb|CBY95239.1| Chemotaxis protein motB Motility protein B [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224566|gb|EFX49629.1| Flagellar motor rotation protein MotB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616922|gb|EFY13830.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618161|gb|EFY15053.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625831|gb|EFY22650.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626283|gb|EFY23093.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632697|gb|EFY29442.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639041|gb|EFY35734.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640481|gb|EFY37134.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646010|gb|EFY42527.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322655476|gb|EFY51784.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660255|gb|EFY56493.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322668121|gb|EFY64280.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674119|gb|EFY70213.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675527|gb|EFY71601.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683059|gb|EFY79075.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686753|gb|EFY82731.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714975|gb|EFZ06546.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130206|gb|ADX17636.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195356|gb|EFZ80536.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199248|gb|EFZ84343.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204163|gb|EFZ89175.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323211878|gb|EFZ96707.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217488|gb|EGA02207.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221977|gb|EGA06366.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323231510|gb|EGA15623.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235952|gb|EGA20031.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240522|gb|EGA24565.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245414|gb|EGA29414.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250185|gb|EGA34077.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253633|gb|EGA37461.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258567|gb|EGA42233.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259386|gb|EGA43023.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266189|gb|EGA49679.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|326622909|gb|EGE29254.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627426|gb|EGE33769.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332988815|gb|AEF07798.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 309 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 73/333 (21%), Positives = 120/333 (36%), Gaps = 71/333 (21%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 +++K++ GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 6 HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 +T I + ++P + + N +LK Sbjct: 66 PLATAVTGGNRIANSESPIPGGGDDYTQQQGEVEKQPNIDELK----------------- 108 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + E L L + ++ + Sbjct: 109 ------------------------------------KRMEQSRLNKLRGDLDQLIESDPK 132 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L+ L + L V + + ++ R MF S+ P + Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMRDI 176 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L+ I VL IS+ GHTD P+ N NW LS DRA ++ + L+ G+ ++ Sbjct: 177 LRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKV 236 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ G A P ++ NRRI +LV ++Q Sbjct: 237 LRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 269 >gi|254228819|ref|ZP_04922242.1| Flagellar motor protein [Vibrio sp. Ex25] gi|262396462|ref|YP_003288315.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25] gi|151938766|gb|EDN57601.1| Flagellar motor protein [Vibrio sp. Ex25] gi|262340056|gb|ACY53850.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25] Length = 330 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 122/331 (36%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ A + G+WK+ +ADFM LMA FLV+W++ D + +KAI + + Sbjct: 3 KQEHVVFKRAKAHSHDEPHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + Q S + IDL+ D + + S+ + Sbjct: 63 SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSYFRGDGD----- 111 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 P + ++ Sbjct: 112 --------------------------------------------GPEIDSLIPGNFDTQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK I + + N V T G+ I + D MF + + P Sbjct: 128 QLAALAKVIERMTAQI---NAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + V + I GHTDA PF+ + NW LS RA A L++ G+ +DR Sbjct: 185 LLLALAPVFQRVNNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARNTLVEGGMPDDR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L +P +S NRRI++ V Sbjct: 245 VMQVTGMSDRALLNPDEPDSSENRRIELFVL 275 >gi|90022860|ref|YP_528687.1| flagellar motor protein MotB [Saccharophagus degradans 2-40] gi|89952460|gb|ABD82475.1| OmpA/MotB [Saccharophagus degradans 2-40] Length = 329 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 65/322 (20%), Positives = 113/322 (35%), Gaps = 47/322 (14%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 D P L W +AD M++LM FF+++ + D K + F Sbjct: 10 DCPAGLPPWMGTFADLMSLLMCFFVLLLSFSEMDAMKFKRLAGSMAQA-----------F 58 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 QN + K I + + + + +K E ++ + Sbjct: 59 GVQNKLNVTDIPKGTSIIAQEFSPGRPEPTPINEIWQKTDDLTEMSLEVQCAEEY----- 113 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 D E+G + + K K E LA +++ + +I + Sbjct: 114 -----DIEQGTEGYDAGAALKVKQKLEELLEDTQDDAYELAAAMHEQITEGQIEIETRGR 168 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 ++ R F S+ E VL+++ VLA Sbjct: 169 MIIIR---------------------IREKGSFVSGSADLSVELKDVLKEVKSVLALRQG 207 Query: 265 VISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I ++GHTD P R+ NW LS R+ S LM G +R +++G+A + Sbjct: 208 KIEVQGHTDNVPIRSARFGSNWALSSARSVSVAHELMAGGDIAERRFEVAGYADTMPIVP 267 Query: 324 SDPM--NSANRRIDILVEDRQG 343 +D + NRR++IL+ +QG Sbjct: 268 NDSAENRAINRRVEILI--KQG 287 >gi|52842529|ref|YP_096328.1| flagellar motor protein MotB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629640|gb|AAU28381.1| chemotaxis (motility protein B) transmembrane [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 312 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 82/331 (24%), Positives = 138/331 (41%), Gaps = 63/331 (19%) Query: 14 FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 II +K+ +D ++ GSWKI +ADF+T +MAFFL+MW++ + + K I +YF Sbjct: 32 PII--RKIKKNDHKHHGGSWKIAFADFVTAMMAFFLLMWLVASLNKAQKAGIAEYFKQPM 89 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 K + + + + + + N D T + + + ++ Sbjct: 90 KVALFGGESMGNRKATIKGGGPNIEDTDGQVSATNKPLINESIAKDK------------- 136 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 E L L E L+M++ L Sbjct: 137 -----------------------------EIVESQANEIKKLEELKSEINLSMEKDPSLA 167 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 L K++ L + G+ I +ID + PMFD S PE +L Sbjct: 168 GLKKQL----------------LMDVVSDGLRIQLIDNQKKPMFDVGSDKINPEIEPILA 211 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 I ++L I+I+GHTDA+P+ N NW LS RA +A + L+K+G+ E+++ Sbjct: 212 NIAKLLNSVPNKITIQGHTDANPYHNPEELEYTNWELSAQRANAARRALIKAGMDENKVM 271 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G++ L +P N NRRI I+V + Sbjct: 272 TVTGYSSTILLDKKNPYNPENRRISIIVMKK 302 >gi|300717114|ref|YP_003741917.1| flagellar motor protein [Erwinia billingiae Eb661] gi|299062950|emb|CAX60070.1| Flagellar motor protein [Erwinia billingiae Eb661] Length = 346 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 75/334 (22%), Positives = 122/334 (36%), Gaps = 71/334 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + N+ II+ KK GSWKI YADFMT +MAFF+VMW+++ + I Y Sbjct: 2 KHNNHPIILVKKKKHKRHEGGHGSWKIAYADFMTAMMAFFMVMWLLSIANPQELVQIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K +T + + ++ S + H Sbjct: 62 FKTPLKVALTGGSKSSESISVIPGGGEDPTQKSGEVH----------------------- 98 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 K D++ K + L L ++ ++ Sbjct: 99 ------------------------------KVVDMDAQKRKLDEIRLNRLREKLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL+ L + + +V + + I IID N PMF + P Sbjct: 129 DPRLKALRPHL---IINMVEEGLR-------------IQIIDSENRPMFKTGRAEVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I +L IS+ GHTD + N NW LS DRA ++ + L+ G+ Sbjct: 173 RDILRAIAPILNDIPNKISLAGHTDDFQYANGDRGYSNWELSADRANASRRELVTGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 ++ ++ G A ++ NRRI +LV + Sbjct: 233 GKMLRVVGMADTMSLKNRGADDAVNRRISLLVLN 266 >gi|89073143|ref|ZP_01159682.1| flagellar motor protein [Photobacterium sp. SKA34] gi|89051096|gb|EAR56553.1| flagellar motor protein [Photobacterium sp. SKA34] Length = 307 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 107/322 (33%), Gaps = 39/322 (12%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 W +AD T+LM FF+++ + D K I K F Sbjct: 7 KCKKGAPPWMATFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KYAF 55 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 QN E + K I + + ++ + ++ + Sbjct: 56 GVQNMLEVNDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRSLDFHEGESDRAGGT 115 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 G+ +T + + + + L + ++ L Sbjct: 116 QRDAGKLTGGQSKKTATQNN-----------------ENDESEADQMQEKLKEVLTKALE 158 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 ++D + E ++I I ++ F + S+ P+ +++++ ++ Sbjct: 159 REISDK---IIEIENLGQQLVIRIREK---GSFPEGSAFLQPKFKPLVRQVAMLVKDVPG 212 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322 +I + GHT + + R NW LS RA S Q + K G ++ ++ G A + Sbjct: 213 IIRVTGHTASDKLDSELYRSNWDLSAQRAVSVAQEMEKVEGFDHTKM-RVIGLADTQPIA 271 Query: 323 ASDP--MNSANRRIDILVEDRQ 342 + + NRR++I + + Sbjct: 272 DNKTQDGKAKNRRVEISIIQGK 293 >gi|89072298|ref|ZP_01158877.1| chemotaxis LafU protein [Photobacterium sp. SKA34] gi|89051830|gb|EAR57282.1| chemotaxis LafU protein [Photobacterium sp. SKA34] Length = 331 Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 75/331 (22%), Positives = 126/331 (38%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 N + I+ K+ V + G+WK+ +ADFM LMA FLV+W++ D+ + AI YFN Sbjct: 3 NTEQIVFKRAVKRHSHQQHGGAWKVAFADFMIALMALFLVLWLLQVVDEKERTAIVAYFN 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + + S N D Sbjct: 63 ---------------NSSVFDEGSGNPFDT------------------------------ 77 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ + + + ++ + N P + + ++ Sbjct: 78 ----------DNSPSPIDFGGDAADMSAQNAAMTMKSIYNGNGNGPESDALIPGSFETQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LA + T + A + + T G+ +++ D MF + ++ P Sbjct: 128 QLSILASVVEETAKQVSAQG---NIAIDITPQGLRVTLQDDFKQNMFHRGNANLTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 VL I + + I I GHTDA+ F+N + NW LS RA A Q L+ G+ DR Sbjct: 185 VLLTIAPIFKQISNSIIISGHTDATQFKNRFSRQTNWELSSSRANVARQTLISGGMPSDR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G A L DP S NRRI++ V Sbjct: 245 VLQVAGMAERALLNKQDPSASENRRIELFVL 275 >gi|260776526|ref|ZP_05885421.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC BAA-450] gi|260607749|gb|EEX34014.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC BAA-450] Length = 300 Score = 170 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 106/312 (33%), Gaps = 29/312 (9%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 +AD M++LM FF+++ + D K I K F QN E Sbjct: 1 MGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEVK 49 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 K I + + ++ + + + Sbjct: 50 DIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGGTQRDKGKQTG 109 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 GK ST ++ E+ + + + L+ L + I L + Sbjct: 110 GKSPDTST---------QDSQNSESDSEQQQSAELSQELETLMESIKKALEREIEQGA-- 158 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 + E I I I ++ F + S+ P+ ++++I E++ ++ + GHTD Sbjct: 159 -IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIAELVKDIPGIVRVSGHTD 214 Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330 + R NW LS RA S Q + K + ++ G A + +D S Sbjct: 215 NQRIDSELYRSNWDLSAQRAVSVAQEMEKVRDFSHQRLQVRGMADTQPLGPNDTEAQRSR 274 Query: 331 NRRIDILVEDRQ 342 NRR++I + + Sbjct: 275 NRRVEISIMQGE 286 >gi|187920655|ref|YP_001889687.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans PsJN] gi|187719093|gb|ACD20316.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 329 Score = 170 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 133/343 (38%), Gaps = 63/343 (18%) Query: 2 NSHGDKNQENDQFIIIKK-KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 S + ++ +I+++ + D ++ G+WKI YADF+T +MAFFL+MW++ +T Sbjct: 5 RSRASREEQAPAPVIVRRSRKGGDHGAHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKF 64 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 K+ IE YFN +L+ ++G + + I + K+ + Sbjct: 65 DKQGIEDYFNTPLSSLLGGNEGTTAARPSVVQGGGRDISDTRPAVGKKSQSEPTP----- 119 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 S+ + L L Sbjct: 120 ---------------------------------------PAVTTPSVAPSDATRLEQLKA 140 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + +++ L+ +I T G+ I I+D +N PMF Sbjct: 141 KLTALIEQSPILKAFKDQIR----------------ISITNEGLRIEIVDSQNRPMFPSG 184 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298 SS P + +L +IG L +SI GHTDA P+ NW LS +RA +A + Sbjct: 185 SSKLQPYAVTILTQIGAALNDVDNRVSIAGHTDAVPYTAGPEGYSNWELSSERANAARRS 244 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 L+ G+ +++ ++ G A + NRRI ILV ++ Sbjct: 245 LVAGGMHGEKLLQVRGLADVLPLNSQVADEPTNRRISILVLNK 287 >gi|161502956|ref|YP_001570068.1| flagellar motor protein MotB [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864303|gb|ABX20926.1| hypothetical protein SARI_01018 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 309 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 72/333 (21%), Positives = 120/333 (36%), Gaps = 71/333 (21%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 +++K++ GSWKI YADFMT +MAFFLVMW+I+ + + +YF Sbjct: 6 HPIVVVKRRKHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQLAEYFRT 65 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 +T I + ++P + + N +LK Sbjct: 66 PLATAVTGGNRIANSESPIPGGGDDYTQQQGEVEKQPNIDELK----------------- 108 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + E L L + ++ + Sbjct: 109 ------------------------------------KRMEQSRLNKLRGDLDQLIESDPK 132 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L+ L + L V + + ++ R MF S+ P + Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMRDI 176 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L+ I VL IS+ GHTD P+ N NW LS DRA ++ + L+ G+ ++ Sbjct: 177 LRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKV 236 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ G A P ++ NRRI +LV ++Q Sbjct: 237 LRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 269 >gi|261212057|ref|ZP_05926343.1| Flagellar motor rotation protein MotB [Vibrio sp. RC341] gi|260838665|gb|EEX65316.1| Flagellar motor rotation protein MotB [Vibrio sp. RC341] Length = 304 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 106/312 (33%), Gaps = 31/312 (9%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W +AD M++LM FF+++ + D K I K F QN E Sbjct: 2 WLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEV 50 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 K I + + ++ + + + + Sbjct: 51 KDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDRAGGNQRDSGQLT 110 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 G+ S ++ E E +++ +A+ I LS + Sbjct: 111 GGQSAETSVQENQNTQSEMQQQQAQAMSE---------QMETVAESIKKALSREIEQGA- 160 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 + E I I I ++ F + S+ P+ ++++I +++ + + GHT Sbjct: 161 --IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVKDIPGKVRVTGHT 215 Query: 273 DASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA 330 D + R NW LS RA S Q + K G R+ ++ G A + +D Sbjct: 216 DNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHQRL-QVRGMADTQPLGPNDTEAQR 274 Query: 331 --NRRIDILVED 340 NRR++I + Sbjct: 275 TINRRVEISILQ 286 >gi|104783884|ref|YP_610382.1| flagellar motor protein MotB [Pseudomonas entomophila L48] gi|95112871|emb|CAK17599.1| putative flagellar motor MotB protein [Pseudomonas entomophila L48] Length = 341 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 80/334 (23%), Positives = 127/334 (38%), Gaps = 62/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q II+K+ ++ G+WKI +ADF T +MAFFLV+W+++ + K AI YF Sbjct: 2 ENNQPIIVKRVKRFG-DGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + + I D S L T + Sbjct: 61 KDPIGFSESGTPYIIDLG---------------------GSPQLAPEKTINPETKSEPTP 99 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + Q E + R+ + Sbjct: 100 DTSIQLDKDQVETMAEQVERERLELLLQELQ----------------------------- 130 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 131 ----------NKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFE 180 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + ISI GHTDA P+ NW LS +RA +A + L+ G + + Sbjct: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGDFGNWELSANRANAARRALVAGGYPDGQ 240 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ G+A L +P N NRRIDI+V ++ Sbjct: 241 VARVVGYASSSLFDRENPFNPVNRRIDIIVLTKK 274 >gi|330821029|ref|YP_004349891.1| OmpA/MotB [Burkholderia gladioli BSR3] gi|327373024|gb|AEA64379.1| OmpA/MotB [Burkholderia gladioli BSR3] Length = 307 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 82/330 (24%), Positives = 130/330 (39%), Gaps = 67/330 (20%) Query: 15 IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 ++++ ++ G+WKI YADF+T +MAFFL+MW++ +T +K IE YFN Sbjct: 19 TVVRRVRKNAHEGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKYDRKGIEDYFNTPLS 78 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 L+ D + T S L+ G + + Sbjct: 79 TLLGTHA---------------------DSNGTARSSVLQAGGQDLSDRRD--------- 108 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 G S +++ E+ L L ++ ++ +L+ Sbjct: 109 -------------------GNGHAASAPAAPAVDAEDAARLSRLRQQLSTLVEENPQLRA 149 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 +I TTR G+ I I+D R+ PMF S+ +L + Sbjct: 150 FKDQIR----------------LSTTREGLRIEIVDSRSRPMFATGSARLEDYASDILFR 193 Query: 255 IGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 IG +L +SI GHTDA P+ NW LS DRA +A + L+ + ED++ +I Sbjct: 194 IGTLLNQVDNRVSIAGHTDAVPYSGGIAGYSNWELSSDRANAARRALVAGHLREDKLLQI 253 Query: 313 SGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 G A NRRI ILV ++Q Sbjct: 254 RGLADVLPLDQGAADAEVNRRISILVLNKQ 283 >gi|327398736|ref|YP_004339605.1| OmpA/MotB domain-containing protein [Hippea maritima DSM 10411] gi|327181365|gb|AEA33546.1| OmpA/MotB domain protein [Hippea maritima DSM 10411] Length = 287 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 79/332 (23%), Positives = 117/332 (35%), Gaps = 48/332 (14%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 +EN + I+KK +W++ Y DFMT +MAFFLVMW+I AT+ +K + Y Sbjct: 3 EENQEGGIVKKCKKCKCEEGGGSAWEVAYGDFMTSMMAFFLVMWLIAATNVKQRKVLSTY 62 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F G +T + + + S++ + SV Sbjct: 63 FTQPGATSLTEGSSMLPSKGVFDIGSRSLTVSQRIPEMPLPSV----------------- 105 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 L + + Sbjct: 106 -------------------------------QPQKTLKGRGLIPKVLRKSGGGIGQSKQT 134 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + K S + E T G+ I I D+ PMF S P Sbjct: 135 MNLYNIMKKIQQVIASKKELLQYRNQIKMEITEEGLRIVIFDKNKRPMFYPGSDKLEPWA 194 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 VL + + LA + I+I GHTDA+P+ NW LS RA +A + + +GVS R Sbjct: 195 KEVLDIVAKQLADISNKITIEGHTDANPYVIGGLSNWDLSTMRANAARREIQTNGVSVSR 254 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 I G+ R +DP + NRRI ILV+ Sbjct: 255 FDSIVGYGDTRPVPGTDPKDPINRRIVILVKK 286 >gi|296531741|ref|ZP_06894566.1| chemotaxis MotB protein [Roseomonas cervicalis ATCC 49957] gi|296267924|gb|EFH13726.1| chemotaxis MotB protein [Roseomonas cervicalis ATCC 49957] Length = 309 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 76/335 (22%), Positives = 127/335 (37%), Gaps = 49/335 (14%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + + +IIKK + + G WKI YADF+T +MAFFLVMW++++T + ++ I Sbjct: 4 ADDHLKRPVIIKKH-HGEHDDEHGGQWKIAYADFVTAMMAFFLVMWLLSSTTESQREGIA 62 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 Q+F + + G D + N+ D D + G + + Sbjct: 63 QFFTASSILDLPSGSGTLDGGRSVLLAGDNRQDALTQVDDGGARQDSQGGESANDGAAAQ 122 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 Sbjct: 123 AAPQQQDAVRDPI----------------------------------------------- 135 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 ++R L ++ + + + E T G+ + I D+ PMF +++ P P Sbjct: 136 -ERQRFDALKAELERQMQTDALREFSQNIQLEMTPEGLRLQIFDRDGQPMFAPAATEPTP 194 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ +G VLA + + GHTDA PF+ NW LS DRA +A + L +SGV Sbjct: 195 RLARILEVVGSVLASVPNEVVVSGHTDAQPFQRGNYSNWELSADRANAARRALERSGVRP 254 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 R+ ++ A +A +P + NRRI + V Sbjct: 255 ARMFRVEAKAAVEPLLAEEPNDPRNRRIAVTVLRS 289 >gi|21231338|ref|NP_637255.1| flagellar motor protein MotD [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768610|ref|YP_243372.1| flagellar motor protein MotD [Xanthomonas campestris pv. campestris str. 8004] gi|21112997|gb|AAM41179.1| MotB protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573942|gb|AAY49352.1| MotB protein [Xanthomonas campestris pv. campestris str. 8004] Length = 324 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 119/326 (36%), Gaps = 57/326 (17%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q Sbjct: 3 RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTTAF----- 57 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 +K + +++G+T S Sbjct: 58 -------------------------GGSSKAASPVQLGNT-----------------QSL 75 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 +++ + S+ + TD + +P + + + ++++ +A++ Sbjct: 76 GADYDRPSVIKAGAPMAASNGPTDPTILPSMAAQMRMPVSLRNQAQLARAQRQMDAVAQQ 135 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 ++ TLS L+ + + I + I +F S++ L + V Sbjct: 136 LNKTLSPLIDKQL---ITIRRRDLWIEVEINSD---ILFVTGSALLAGSARGTLSTLAAV 189 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + GV+ R++ + G+ Sbjct: 190 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADEGVAPQRLAMV-GYGE 248 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274 >gi|188991572|ref|YP_001903582.1| flagellar motor protein MotD [Xanthomonas campestris pv. campestris str. B100] gi|167733332|emb|CAP51531.1| motB1 [Xanthomonas campestris pv. campestris] Length = 324 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 119/326 (36%), Gaps = 57/326 (17%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q Sbjct: 3 RRRKHHEDHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTTAF----- 57 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 +K + +++G+T S Sbjct: 58 -------------------------GGSSKAASPVQLGNT-----------------QSL 75 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 +++ + S+ + TD + +P + + + ++++ +A++ Sbjct: 76 GADYDRPSVIKAGAPMAASNGPTDPTILPSMAAQMRMPVSLRNQAQLARAQRQMDAVAQQ 135 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 ++ TLS L+ + + I + I +F S++ L + V Sbjct: 136 LNKTLSPLIDKQL---ITIRRRDLWIEVEINSD---ILFVTGSALLAGSARGTLSTLAAV 189 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + GV+ R++ + G+ Sbjct: 190 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADEGVAPQRLAMV-GYGE 248 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274 >gi|332992377|gb|AEF02432.1| flagellar motor protein MotB [Alteromonas sp. SN2] Length = 309 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 62/322 (19%), Positives = 109/322 (33%), Gaps = 39/322 (12%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 P L +W +AD M++LM FF+++ + D K I K F Sbjct: 10 PPEGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFG 58 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 QN E K I D T Q++ + + + + + + S + Sbjct: 59 VQNKIEVKDIPKGTSVIAMEFRPGRPDPSPIDTIQQQTIEMTQQMLEFQAGDEDSSGGRQ 118 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + G+ + ++ + + A+ + Sbjct: 119 KQRGEQRGGQ-------------------SQQTATDQSSSESQSSDQTQTAELMKKVAQQ 159 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V E+ + I I + F S+ P+ +L+KIG +LA Sbjct: 160 LQKQILDGAVELESLGQQLTIRIREN---GSFSAGSAFLQPQFQPILRKIGVLLADVPGE 216 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIA 323 I I GH+D N R NW LS RA + + + G E R+ + G A + Sbjct: 217 IEISGHSDGQHIANELYRSNWDLSSQRAVAVAEAMRTAPGFDESRM-SVVGKADTDPMVE 275 Query: 324 SDP---MNSANRRIDILVEDRQ 342 + NRR++I + + Sbjct: 276 DATTPADRARNRRVEININQGK 297 >gi|255021445|ref|ZP_05293492.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus ATCC 51756] gi|254969150|gb|EET26665.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus ATCC 51756] Length = 307 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 75/334 (22%), Positives = 120/334 (35%), Gaps = 64/334 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E Q I+IK+ + G+WKI YADF+T LMAFFL+MW++ +T T + I Q+F Sbjct: 5 EKSQPIVIKRIKKT--AGGHGGAWKIAYADFVTALMAFFLLMWLLGSTTKATLQGIAQWF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + + G + N + + + + + Sbjct: 63 KNPEQVSLMGGPGSGSSNSVLNGGGSNINKTVGEVQRGQKKQSMPTNEAPADRSQTVDQR 122 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 N+ L K M + Sbjct: 123 NLREL-----------------------------------------------KNKLMAQI 135 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 K +LA L + + + V+ D PMF S++ P Sbjct: 136 KSNPELAAFRHQLLISITPEGLRIQVV-------------DSSKRPMFANGSTVLEPYAR 182 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + I L ISI GHTDA + N+ LS RA S Q+L++SG++E+ Sbjct: 183 TIFSAIAPTLDELPNRISITGHTDALRYLNEGRGYSNFNLSAGRANSVRQILVQSGLAEN 242 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ ++ G L + DP + NRR+ I+V R Sbjct: 243 KVLRVVGMGSAVLFVPKDPDSPLNRRVSIVVLSR 276 >gi|254525153|ref|ZP_05137208.1| chemotaxis MotB protein [Stenotrophomonas sp. SKA14] gi|219722744|gb|EED41269.1| chemotaxis MotB protein [Stenotrophomonas sp. SKA14] Length = 320 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 133/332 (40%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +I+++ ++ GSWK+ YADF+T +MAFFLV+W++ +T + AI +YF Sbjct: 3 ETKPTVIVRRVKKAGHAAHHGGSWKVAYADFVTAMMAFFLVLWLMASTSKPERAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +P S S+ G+T+ + Sbjct: 63 RNP---------------SPLSGKSATPAPGMAGPGGASTSMIKLGGATDVSRGNSNDPF 107 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + + K Sbjct: 108 ------------------------------------------QNQKEAVPQPLDQQQRDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++L+ L K++ + + +L + T G+ I I+D++N PMFD S+ P T Sbjct: 126 QQLEQLMKELQEAISKSQALEPFKDQLLLDLTPEGLRIQIVDKQNRPMFDLGSATLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L ++ E L H IS+ GHTD + + NW LS DRA +A + L+ G+ + Sbjct: 186 QQILHELAEYLNHVPNRISLTGHTDITAYSAARGYGNWELSADRANAARRALIDGGLEDS 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +I+++ G + L +DP N NRRI I+V Sbjct: 246 KITRVVGLSSSVLFDKADPQNPINRRISIVVM 277 >gi|194364216|ref|YP_002026826.1| flagellar motor protein MotB [Stenotrophomonas maltophilia R551-3] gi|194347020|gb|ACF50143.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3] Length = 318 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 79/332 (23%), Positives = 134/332 (40%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +I+++ ++ GSWK+ YADF+T +MAFFLV+W++ +T + AI +YF Sbjct: 3 ETKPTVIVRRVRKAGHAAHHGGSWKVAYADFVTAMMAFFLVLWLMASTSKPERAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +P SS S+ G+T+ + Sbjct: 63 RNP---------------SPLVGSSATPAPGMAGPGGASTSMIKLGGATDISRGSSNDPF 107 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + + K Sbjct: 108 ------------------------------------------QNQKEAVPQPVDQQQRDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++L+ L K++ + + +L + T G+ I I+D++N PMFD S+ P T Sbjct: 126 QQLEALMKELQEAISRSQALEPFKDQLLLDLTPEGLRIQIVDKQNRPMFDLGSATLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L ++ E L H IS+ GHTD + + NW LS DRA +A + L+ G+ + Sbjct: 186 QQILHELAEYLNHVPNRISLTGHTDITAYSAARGYGNWELSADRANAARRALIDGGLEDS 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +I+++ G + L +DP N NRRI I+V Sbjct: 246 KITRVVGLSSSVLFDKADPQNPINRRISIVVM 277 >gi|254463728|ref|ZP_05077139.1| OmpA/MotB [Rhodobacterales bacterium Y4I] gi|206684636|gb|EDZ45118.1| OmpA/MotB [Rhodobacterales bacterium Y4I] Length = 282 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 67/332 (20%), Positives = 130/332 (39%), Gaps = 58/332 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 Q N IIIK+K ++ G+WK+ YADF+T +MAFF++MW++NAT + +K + Y Sbjct: 8 QSNVAPIIIKRKKVSGGDGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADY 67 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F+P P R S + + + + G+ Sbjct: 68 FSP---------------SIPLSRVSGGGNGAFQGDSMFTEDIQPQSGT----------- 101 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + ++ + G + + + + S + L E ++++ Sbjct: 102 --------GATDINPMDAQKAQGDTGVESTEKREEDDSKFRAIEEQLSGRGGESMVSVA- 152 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + ++ T G++I + + P+F++ + P P Sbjct: 153 ----------------------MARHIVTRVTDEGLIIELFATEDMPLFEEDQAEPKPLF 190 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +++ I V T ++I GH + P W LS RA +L G+ R Sbjct: 191 RDLVRMIARVSDGVTSNVAIGGHIRSHPVVLAKNPVWELSHARADITRTLLESGGLDAGR 250 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + +++G A +L + + PM + N RI+I+ Sbjct: 251 VHRVTGHADRKLAVGN-PMAARNDRIEIIFLR 281 >gi|295095518|emb|CBK84608.1| Flagellar motor protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 309 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 79/334 (23%), Positives = 124/334 (37%), Gaps = 71/334 (21%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +I+KK+ + GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 5 SHPIVIVKKRKHKGHGHGSHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFR 64 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 +T I + +P + + N +LK Sbjct: 65 TPLATAVTGGPRISNSDSPIPGGGDDYTQQQGEVKKQPNIDELK---------------- 108 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + E L L + ++ Sbjct: 109 -------------------------------------KRMEQARLKKLRGDLDQLIEADP 131 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L+ L + L G+ I IID +N PMF S+ P Sbjct: 132 KLRALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSADVEPYMRD 175 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ I VL IS+ GHTD P+ NW LS DRA ++ + L+ G+ + + Sbjct: 176 ILRAIAPVLNGIPNRISLSGHTDDFPYATGEKGYSNWELSADRANASRRELVAGGLDDGK 235 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ G A P ++ NRRI +LV ++Q Sbjct: 236 VLRVVGMAATMRLTDRGPDDAINRRISLLVLNQQ 269 >gi|213426377|ref|ZP_03359127.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 309 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 118/333 (35%), Gaps = 71/333 (21%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 +++K++ GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 6 HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 +T I + ++P + + N +L+ Sbjct: 66 PLATAVTGGNRIANSKSPIPGGGDDYTQQQGEVEKQPNIDELE----------------- 108 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 E L L + ++ + Sbjct: 109 ------------------------------------KTVEQSRLNKLRGDLDQLIESDPK 132 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L+ L + L V + + ++ R F S+ P + Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FKTGSAEVEPYMRDI 176 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L+ I VL IS+ GHTD P+ N NW LS DRA ++ + L+ G+ ++ Sbjct: 177 LRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKV 236 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ G A P ++ NRRI +LV ++Q Sbjct: 237 LRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 269 >gi|325923841|ref|ZP_08185450.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865] gi|325545675|gb|EGD16920.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865] Length = 329 Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 111/326 (34%), Gaps = 52/326 (15%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q Sbjct: 3 RRRKHHEDHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTTAF----- 57 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 G ++ ++ ++ Sbjct: 58 -------------------------------------GGSSNAASPVQIGKTQTLGADYD 80 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + K + + TD + +P + + + ++++ +A + Sbjct: 81 RPSVIKAGVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVAAQ 140 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 +S TL+ L+ + + I + I +F S+ L + V Sbjct: 141 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALAGTARDTLSTLASV 194 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + GV+ R++ + G+ Sbjct: 195 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 253 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 254 FRARADNSTEAGRNANRRVVLIILAD 279 >gi|186473029|ref|YP_001860371.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815] gi|184195361|gb|ACC73325.1| OmpA/MotB domain protein [Burkholderia phymatum STM815] Length = 327 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 80/344 (23%), Positives = 129/344 (37%), Gaps = 65/344 (18%) Query: 2 NSHGDKNQENDQFIIIKK-KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 G++ +I+++ K ++ G+WKI YADF+T +MAFFL+MW++ +T Sbjct: 5 RPRGEEASAKAAPVIVRRSKKGDGHGGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKY 64 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQ-NPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119 K+ IE YFN +L+ ++G + N + ++ D + T K T Sbjct: 65 DKQGIEDYFNTPLSSLLGGNEGTAAARPNVIQGGGRDISDTRPGDGKTMQQEPAKPTLTQ 124 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 L L Sbjct: 125 ITTVPNDT---------------------------------------------ARLEQLK 139 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + ++ L+ +I T G+ I I+D PMF Sbjct: 140 SKLSALIEDTPALKAFKDQIR----------------ISITNEGLRIEIVDTLKRPMFAT 183 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQ 297 SS + +L +IG L ISI GHTDA + N NW LS +RA +A + Sbjct: 184 GSSKLQSYAVEILTRIGAALNDVDNRISIAGHTDAVTYANGPAGYSNWELSSERANAARR 243 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 L+ G+ ED++ ++ G A A+ NRRI +LV ++ Sbjct: 244 ALVAGGMREDKLLQVRGLADVLPLNANVADEPTNRRISVLVLNK 287 >gi|254509011|ref|ZP_05121116.1| flagellar motor protein [Vibrio parahaemolyticus 16] gi|219548046|gb|EED25066.1| flagellar motor protein [Vibrio parahaemolyticus 16] Length = 298 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 109/313 (34%), Gaps = 31/313 (9%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 +AD M++LM FF+++ + D K I K F QN E Sbjct: 1 MGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEVK 49 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 K I + + ++ + + + Sbjct: 50 DIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGG---------T 100 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 +D K T + +N ++ + + + L+ L + I L + Sbjct: 101 QRDQGKLTGGQSPDTSTQNNQNSESDSQQQQSAEMSQELETLMESIKKALEREIEQGA-- 158 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 + E I I I ++ F + S+ P+ ++++I +++ ++ + GHTD Sbjct: 159 -IEVENLGQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIADLVKDIPGIVRVSGHTD 214 Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NS 329 + R NW LS RA S Q + K G + R+ ++ G A +D S Sbjct: 215 NQRIESELYRSNWDLSAQRAVSVAQEMEKVRGFTSQRL-RVRGMADTEPLGPNDTEAQRS 273 Query: 330 ANRRIDILVEDRQ 342 NRR++I + + Sbjct: 274 RNRRVEISIMQGE 286 >gi|153831776|ref|ZP_01984443.1| lateral flagellar motor protein B [Vibrio harveyi HY01] gi|148872286|gb|EDL71103.1| lateral flagellar motor protein B [Vibrio harveyi HY01] Length = 330 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 70/331 (21%), Positives = 125/331 (37%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ A + + G+WK+ +ADFM LMA FLV+W++ D + +KAI + + Sbjct: 3 KQEHVVFKRAKAHNHDEFHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + Q S + IDL+ D + + S+ + Sbjct: 63 SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSFFQGDGD----- 111 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 P + ++ Sbjct: 112 --------------------------------------------GPEIDSLIPGNFDTQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK I + + A V T G+ I + D MF + + P Sbjct: 128 QLALLAKVIDEVVGQISAQG---NVNVTITPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + V + + I GHTD++PF+ + NW LS RA A L++ G+ +DR Sbjct: 185 LLLALAPVFERISNPLIISGHTDSTPFKKRFGRQSNWALSASRADVARNTLVEGGMPDDR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L +P +S NRRI++ + Sbjct: 245 VMQVTGMSDRALLNPEEPDSSENRRIELFIL 275 >gi|87121902|ref|ZP_01077787.1| flagellar motor protein [Marinomonas sp. MED121] gi|86162700|gb|EAQ63980.1| flagellar motor protein [Marinomonas sp. MED121] Length = 304 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 70/327 (21%), Positives = 125/327 (38%), Gaps = 60/327 (18%) Query: 15 IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 II++ + ++ G+WKI ADF +MAFFLVMWIIN AI+ YFN Sbjct: 7 TIIRRVKKVKKGGHHGGAWKIALADFALAMMAFFLVMWIINVASPQELAAIQGYFNDPKG 66 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + +G + K ++L+ N+ Sbjct: 67 MSTAGYSN----------------------------NPIDLGGSPAKSTERKLDINLPDP 98 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + Q+ + K + + +++ Sbjct: 99 GSVQRPDSVK--------------------------------EDANSHRDQVAEQEQADL 126 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 A V + + + + E T GI ++++D++N PMF + S +P+ + + Sbjct: 127 AAALGKKFEGEKVFEAVKENLQIEITPDGIRVTLLDKQNKPMFAQGSGRLMPDFELAMVN 186 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 IG+VL+ + + GHTD+S + NW LS RA A ++L + G + R ++ G Sbjct: 187 IGQVLSGLNNKLVVSGHTDSSAYSFAGLGNWELSAMRANEARRLLREGGAGDTRFVQVMG 246 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDR 341 + +DP NRR+ +L+ Sbjct: 247 LSDTAPYDRTDPAAGINRRVSVLLLTD 273 >gi|296101766|ref|YP_003611912.1| flagellar motor protein MotB [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056225|gb|ADF60963.1| flagellar motor protein MotB [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 309 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 79/334 (23%), Positives = 123/334 (36%), Gaps = 71/334 (21%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +I+KK+ GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 5 SHPIVIVKKRKHKGHGHGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFR 64 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 ++ I + +P + + N +LK Sbjct: 65 TPLATAVSGGPRISNSDSPIPGGGDDYTQKQGEVKKEPNIDELK---------------- 108 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 K E L L + ++ Sbjct: 109 -------------------------------------RKMEQARLKKLRGDLDQLIEADP 131 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L+ L + L G+ I IID +N PMF S+ P Sbjct: 132 KLRALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSAEVEPYMRD 175 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ I VL IS+ GHTD P+ NW LS DRA ++ + L+ G+ + + Sbjct: 176 ILRAIAPVLNGIPNRISLSGHTDDFPYATGEKGYSNWELSADRANASRRELVAGGLDDGK 235 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ G A P ++ NRRI +LV ++Q Sbjct: 236 VLRVVGMAATMRVSDRGPDDAINRRISLLVLNQQ 269 >gi|293415204|ref|ZP_06657847.1| chemotaxis protein MotB [Escherichia coli B185] gi|291432852|gb|EFF05831.1| chemotaxis protein MotB [Escherichia coli B185] Length = 308 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 76/336 (22%), Positives = 122/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGNRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R PMF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNR-------------PMFKTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|170769416|ref|ZP_02903869.1| chemotaxis protein MotB [Escherichia albertii TW07627] gi|170121740|gb|EDS90671.1| chemotaxis protein MotB [Escherichia albertii TW07627] Length = 308 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 73/336 (21%), Positives = 121/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQTHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGNRISNSESPIPGGGDDYTQRRGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L + + + ++ PMF S+ P Sbjct: 129 DPKLRALRPHLKIDL---LQEGLRIQIIDSQN-------------RPMFKIGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ N NW LS +RA ++ + L G+ + Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYANGEKGYSNWELSTERANASRRELAAGGLDD 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 268 >gi|126738556|ref|ZP_01754261.1| chemotaxis protein MotB [Roseobacter sp. SK209-2-6] gi|126720355|gb|EBA17061.1| chemotaxis protein MotB [Roseobacter sp. SK209-2-6] Length = 278 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 65/334 (19%), Positives = 130/334 (38%), Gaps = 59/334 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 Q N IIIKKK ++ G+WK+ YADF+T +MAFFL+MW++NAT + +K + Y Sbjct: 4 QSNMAPIIIKKKKVSGGDGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGLADY 63 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F+ P R S + + + + G+ Sbjct: 64 FS---------------PSIPLSRVSGGGNGAFQGDSMFTEDIQPQSGT----------- 97 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + + ++ SK + + + Sbjct: 98 ----------------------GATDMNPMDAQQAQGETGVSDSQKAEEDSKLRAIEEQL 135 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + R + I + + ++ + G++I + + +F+ ++ P P Sbjct: 136 QGRGGESMVSIE----------MARHIITRISDEGLIIELFETETAKLFEDGTAEPTPLF 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +++ + V A +++ GH + P W +S RA +A +L G+ +R Sbjct: 186 RDLVRMVSRVSATVANEVAVSGHIQSQPVVIAQNPVWGVSHQRADAARTLLESGGMKANR 245 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 I +++G+A +L + PM+ N R++I++ Q Sbjct: 246 IQRVTGYADRKLAAQN-PMSPRNNRVEIILLREQ 278 >gi|209919315|ref|YP_002293399.1| flagellar motor protein MotB [Escherichia coli SE11] gi|218554477|ref|YP_002387390.1| flagellar motor protein MotB [Escherichia coli IAI1] gi|209912574|dbj|BAG77648.1| chemotaxis protein MotB [Escherichia coli SE11] gi|218361245|emb|CAQ98829.1| protein that enables flagellar motor rotation [Escherichia coli IAI1] gi|324017971|gb|EGB87190.1| chemotaxis protein MotB [Escherichia coli MS 117-3] Length = 308 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 76/336 (22%), Positives = 122/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R PMF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNR-------------PMFKTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|30248076|ref|NP_840146.1| flagellar motor protein MotB [Nitrosomonas europaea ATCC 19718] gi|30179961|emb|CAD83956.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718] Length = 307 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 74/319 (23%), Positives = 127/319 (39%), Gaps = 60/319 (18%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 ++ G+WKI YADF+T +MAFFL+MW++ +T K+ I +YF K + G D Sbjct: 20 GQHHGGAWKIAYADFVTAMMAFFLLMWLLGSTTQGDKEGIAEYFKTPLKVALLGGDGSGD 79 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 + + + Sbjct: 80 STSVVKGGGDDISKKIGQ------------------------------------------ 97 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 D K + E K K R++D + S Sbjct: 98 ----------MKRSDFDDLKRSIDMDALQALQDRFELEQLEKLKARIED------TINSN 141 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + +L + T G+ I I+D++N PMF + T ++L +IG++L Sbjct: 142 PALNKFKSQLLLDITSEGLRIQIVDEKNRPMFSMGRAELQSYTKMILHEIGKMLNDVGNK 201 Query: 266 ISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 IS+ GHTDA+P+ NW LS DRA ++ + L+ G+S +++ ++ G + + Sbjct: 202 ISLSGHTDATPYPTGEKSYSNWELSADRANASRRELIAGGMSPEKMLRVVGLSSAVMFDK 261 Query: 324 SDPMNSANRRIDILVEDRQ 342 +DP + NRRI I+V +++ Sbjct: 262 ADPFSPFNRRISIIVMNKK 280 >gi|256022446|ref|ZP_05436311.1| flagellar motor protein MotB [Escherichia sp. 4_1_40B] gi|300917528|ref|ZP_07134185.1| chemotaxis protein MotB [Escherichia coli MS 115-1] gi|300415233|gb|EFJ98543.1| chemotaxis protein MotB [Escherichia coli MS 115-1] Length = 308 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLWKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ PMF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQN-------------RPMFRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|308187234|ref|YP_003931365.1| Chemotaxis protein motB (Motility protein B) [Pantoea vagans C9-1] gi|308057744|gb|ADO09916.1| Chemotaxis protein motB (Motility protein B) [Pantoea vagans C9-1] Length = 313 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 73/335 (21%), Positives = 122/335 (36%), Gaps = 72/335 (21%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 N ++IKK+ ++ GSWKI YADFMT +MAFF+VMW+++ + I Sbjct: 2 KHGNRPIVLIKKRKHKGHEGSH-GSWKIAYADFMTAMMAFFMVMWLLSIANPQELVQIAD 60 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YF K +T D +P + + Sbjct: 61 YFKTPLKVAITGGARSSDSDSPIPGGGDDPTKKIGE------------------------ 96 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + K D++ K + L L ++ ++ Sbjct: 97 -----------------------------VNKVVDMDAQKRKLDEIRLNRLREKLDQMIE 127 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 RL+ L + + +V + + I IID +N PMF + P Sbjct: 128 ADPRLKALRPHL---IINMVEEGLR-------------IQIIDSQNRPMFKTGRAEVEPY 171 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L+ I +L IS+ GHTD + NW LS DRA ++ + L+ G+ Sbjct: 172 MRDILRAIAPILNDIPNRISLAGHTDDFQYAGGDKGYSNWELSTDRANASRRELVMGGLD 231 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 ++ ++ G A ++ NRRI +LV + Sbjct: 232 SGKVLRVLGMADTMRLKNRGGNDAVNRRISLLVLN 266 >gi|320157195|ref|YP_004189574.1| flagellar motor rotation protein MotB [Vibrio vulnificus MO6-24/O] gi|319932507|gb|ADV87371.1| flagellar motor rotation protein MotB [Vibrio vulnificus MO6-24/O] Length = 300 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 110/313 (35%), Gaps = 31/313 (9%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 +AD M++LM FF+++ + D K I K F QN E Sbjct: 1 MGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEVK 49 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 K I + + ++ + + + Sbjct: 50 DIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGG---------T 100 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 +D K T + + +++ + K ++ L + I L + Sbjct: 101 QRDQGKMTGGQSPETSTQTNQNTEQQQQQQQSEAMSKEMETLMESIKKALEREIEQGA-- 158 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 + E I+I + ++ F + S+ P+ ++++I E++ ++ I GHTD Sbjct: 159 -IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRISGHTD 214 Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NS 329 + R NW LS RA S Q + K G S R+ ++ G A + +D + Sbjct: 215 NQRLDSELYRSNWDLSAQRAVSVAQEMEKVRGFSHQRL-RVRGMADTDPLVDNDTEENRA 273 Query: 330 ANRRIDILVEDRQ 342 NRR++I + + Sbjct: 274 RNRRVEISIMQGE 286 >gi|269960142|ref|ZP_06174518.1| chemotaxis LafU protein [Vibrio harveyi 1DA3] gi|269835113|gb|EEZ89196.1| chemotaxis LafU protein [Vibrio harveyi 1DA3] Length = 330 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 70/331 (21%), Positives = 125/331 (37%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ A + + G+WK+ +ADFM LMA FLV+W++ D + +KAI + + Sbjct: 3 KQEHVVFKRAKAHNHDEFHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + Q S + IDL+ D + + S+ + Sbjct: 63 SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSFFQGDGD----- 111 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 P + ++ Sbjct: 112 --------------------------------------------GPEIDSLIPGNFDTQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK I + + A V T G+ I + D MF + + P Sbjct: 128 QLALLAKVIDEVVGQISAQG---NVNVTITPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + V + + I GHTD++PF+ + NW LS RA A L++ G+ +DR Sbjct: 185 LLLALAPVFERISNPLIISGHTDSTPFKKRFGRQSNWALSASRADVARNTLVEGGMPDDR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L +P +S NRRI++ + Sbjct: 245 VMQVTGMSDRALLNPEEPDSSENRRIELFIL 275 >gi|78047517|ref|YP_363692.1| flagellar motor protein MotD [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035947|emb|CAJ23638.1| flagellar motor protein MotB [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 324 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 107/326 (32%), Gaps = 57/326 (17%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q Sbjct: 3 RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAF----- 57 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 N K ++ Sbjct: 58 -----GGSSNKASPVQLGKTQTLGADYDRP------------------------------ 82 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 S+ + TD + +P + + + ++++ + ++ Sbjct: 83 -------SVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 +S TL+ L+ + + I + I +F S+ L + V Sbjct: 136 LSKTLAPLIDKQL---ITIRRNDLWIEVEINSD---ILFGTGSATLAGGARGTLSTLASV 189 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + G++ R++ + G+ Sbjct: 190 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGIAPQRLAMV-GYGE 248 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274 >gi|312884825|ref|ZP_07744517.1| Flagellar motor rotation protein MotB [Vibrio caribbenthicus ATCC BAA-2122] gi|309367477|gb|EFP95037.1| Flagellar motor rotation protein MotB [Vibrio caribbenthicus ATCC BAA-2122] Length = 331 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 64/331 (19%), Positives = 117/331 (35%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ + D + G+WK+ +ADFM LMA FLV+WI+ D + +KAI + + Sbjct: 3 RQESVVFKRSKSEDHDVVHGGAWKVAFADFMIALMALFLVLWIMQVVDREERKAIMAHLH 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + FD ++ ++ Sbjct: 63 SASVFEKSYG-NPFDTSQSISPIDLAS-------------------ESSVPSRHDLTHTV 102 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + + + + ++ Sbjct: 103 NSFFDGDGDGPETDSLIPGNFDT-----------------------------------QE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 RL LAK I + V T G+ + + D MF + S P Sbjct: 128 RLAALAKVIEEATKQ---NGAQGNVNITVTPQGLRVVLQDDEKQTMFSRGGSKLTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L I + I I GHTD+ +++ + NW LS RA +A L+++G+ +R Sbjct: 185 LLVAIAPIFEKVANPIIISGHTDSIRYKSRFNIKSNWELSTSRANAARYTLVQAGMPSER 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L P +S NRRI++ V Sbjct: 245 VLQVTGMSDRALLNPQAPKSSENRRIELFVL 275 >gi|283784104|ref|YP_003363969.1| lateral flagellar motor protein B [Citrobacter rodentium ICC168] gi|282947558|emb|CBG87111.1| lateral flagellar motor protein B [Citrobacter rodentium ICC168] Length = 331 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 69/341 (20%), Positives = 138/341 (40%), Gaps = 52/341 (15%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M ++ + II++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKAANRRDRGAKTTIIRRQIKKNHGGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKT 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 ++ I + Q+ ++ + I + + Sbjct: 61 ERENIVAALH---------------GQSIFNGGGLAPLNKIGKQTIVPGASSKSV----- 100 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K++ ++ + E Sbjct: 101 --------------------------------TRSRPDKASPAKEEVKVSEEVAKKAKDV 128 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + A+ +KK +L + +S S ++ + E G+ + I D +N MF++ Sbjct: 129 NEKTALLKKKSATELGELATSIQSIARKAHMETNLEMEIVPQGLRVLIKDDKNRNMFERG 188 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 S+ +P +L ++ V I I GHTDA +++ +NW LS DRA SA +VL Sbjct: 189 SARIMPFFQSLLTELAPVFDSLDNKIIITGHTDAMAYKSDIYNNWNLSGDRALSARRVLE 248 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 249 QAGMPEDKVMQVSAMADQMLLDAKNPESAGNRRIEIMVLTK 289 >gi|296161288|ref|ZP_06844096.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] gi|295888446|gb|EFG68256.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] Length = 329 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 78/343 (22%), Positives = 130/343 (37%), Gaps = 63/343 (18%) Query: 2 NSHGDKNQENDQFIIIKKKVAIDDTPNNLG-SWKIVYADFMTVLMAFFLVMWIINATDDD 60 NS + ++ +I+++ +D + G +WKI YADF+T +MAFFL+MW++ +T Sbjct: 5 NSRASQGEQALAPVIVRRSKKGEDHGGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKY 64 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 K +GI D N P S Sbjct: 65 DK------------------QGIEDYFNTPLSSLIG------------------------ 82 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 ++ + + S+ + + + D +KS + + Sbjct: 83 ---------------GNEGTAAARPSVVQGGGRDISDTRPGDGKKSQTQPTPPATAAPTV 127 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 A + ++ L I + T G+ I I+D +N PMF Sbjct: 128 APSDAARLEQLKAKLTALIEQ---SPALKAFKDQIRISITNEGLRIEIVDSQNRPMFPSG 184 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298 SS P +L +IG L ISI GHTDA P+ NW LS +RA +A + Sbjct: 185 SSKLQPYAETILTQIGAALNDVDNRISIAGHTDAVPYTAGPEGYSNWELSSERANAARRA 244 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 L+ G+ +++ ++ G A ++ NRRI ILV ++ Sbjct: 245 LVAGGMHGEKLLQVRGLADVLPLNSNIADEPTNRRISILVLNK 287 >gi|320177401|gb|EFW52402.1| Flagellar motor rotation protein MotB [Shigella dysenteriae CDC 74-1112] Length = 308 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQTHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R MF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|330501613|ref|YP_004378482.1| flagellar motor protein MotB [Pseudomonas mendocina NK-01] gi|328915900|gb|AEB56731.1| flagellar motor protein MotB [Pseudomonas mendocina NK-01] Length = 334 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 77/334 (23%), Positives = 129/334 (38%), Gaps = 61/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q II+K+ ++ G+WKI +ADF T +MAFFLVMW+ Sbjct: 2 ENNQPIIVKRVKKTA-GGHHGGAWKIAFADFATAMMAFFLVMWL---------------- 44 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + I P +++ +ID T + + + + + Sbjct: 45 --MSSATPEQKRAISGYFQDPIGFTESASPYAIDLGGTPTPAPERTLNPDVSETPE---- 98 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 +E + M+++ Sbjct: 99 -------------------------------------SQPDETGVSTDQIETLAEKMEQE 121 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + L + + +LFE T+ G+ I I+D N PMF S+ P Sbjct: 122 RLELLLQELQNKVEENPELQRFKDQILFEITQDGLRIQIMDAENRPMFALGSAELQPYFE 181 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + ISI GHTDA PF NW LS +RA +A + L+ G +++ Sbjct: 182 DILLAMADTIRAVPNKISISGHTDAKPFAGRGDFGNWELSSNRANAARRTLVAGGYPDEQ 241 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ G+A L +DP N NRRIDI+V ++ Sbjct: 242 VARVVGYASSALFDRADPFNPVNRRIDIVVLTKK 275 >gi|310767897|gb|ADP12847.1| Chemotaxis protein [Erwinia sp. Ejp617] Length = 343 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 77/334 (23%), Positives = 128/334 (38%), Gaps = 71/334 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + N + I++ K+ + GSWKI YADFMT +MAFFLVMW+I+ + I Y Sbjct: 2 KHNGRPIVLVKRKKSHKHVGSHGSWKIAYADFMTAMMAFFLVMWLISISSPQQLVQIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K +T + D +P ++ + + H Sbjct: 62 FKTPLKVALTGGQRSSDSSSPIPGGGRDPTEKIGEVH----------------------- 98 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 K DL+K +K + L L + ++ Sbjct: 99 ------------------------------KVADLDKQKSKLDEIRLNRLRENLDQLIEA 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL+ L + + +V + + I IID +N PMF S+ Sbjct: 129 DPRLRALRPHL---IINMVQEGLR-------------IQIIDSQNRPMFKTGSAEVESYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I +L IS+ GHTD P+ NW LS DRA ++ + L+ G++ Sbjct: 173 RDILRAIAPILNQIPNRISLAGHTDDFPYPGGERGYSNWELSADRANASRRELVAGGLNS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 ++ ++ G + ++ NRRI +LV + Sbjct: 233 GKMLRVVGMSDTMKLKNRGANDAVNRRISLLVLN 266 >gi|325916150|ref|ZP_08178436.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937] gi|325537641|gb|EGD09351.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937] Length = 324 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 116/326 (35%), Gaps = 57/326 (17%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q Sbjct: 3 RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAF----- 57 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + N+ +++G T S Sbjct: 58 -------------------------GGSSTNASPVQLGKT-----------------QSL 75 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 +++ + S+ + TD + +P + + + ++++ + ++ Sbjct: 76 GADYDRPSVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQTQLARAQRQMDAVEQQ 135 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 +S TLS L+ + + I + I +F S+ L + V Sbjct: 136 LSKTLSPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSATLAGGARGTLSTLASV 189 Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + G++ R++ + G+ Sbjct: 190 LRDAPNGVRVEGYTDNQPIATVQFPSNWELSAARAASVVHLFADDGIAPQRLAMV-GYGE 248 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 249 FRARADNTTEAGRNANRRVVLIILAD 274 >gi|292488570|ref|YP_003531454.1| chemotaxis protein MotB [Erwinia amylovora CFBP1430] gi|292899741|ref|YP_003539110.1| chemotaxis protein [Erwinia amylovora ATCC 49946] gi|291199589|emb|CBJ46706.1| chemotaxis protein [Erwinia amylovora ATCC 49946] gi|291554001|emb|CBA21046.1| Chemotaxis protein MotB (Motility protein B) [Erwinia amylovora CFBP1430] gi|312172716|emb|CBX80972.1| Chemotaxis protein MotB (Motility protein B) [Erwinia amylovora ATCC BAA-2158] Length = 343 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 75/334 (22%), Positives = 127/334 (38%), Gaps = 71/334 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + N + I++ K+ + GSWKI YADFMT +MAFFLVMW+I+ + I Y Sbjct: 2 KHNGRPIVLVKRKKSHKHVGSHGSWKIAYADFMTAMMAFFLVMWLISISSPQQLVQIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K +T + D +P + + + H Sbjct: 62 FKTPLKVALTGGQRSSDSSSPIPGGGLDPTEKIGEVH----------------------- 98 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 K DL+K +K + L L + ++ Sbjct: 99 ------------------------------KVADLDKQKSKLDEIRLNRLRENLDQLIEA 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL+ L + + +V + + I IID +N PMF S+ Sbjct: 129 DPRLRALRPHL---IINMVQEGLR-------------IQIIDSQNRPMFKTGSAEVESYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I +L +S+ GHTD P+ NW LS +RA ++ + L+ G++ Sbjct: 173 RDILRAIAPILNQIPNRLSLAGHTDDFPYAGGERGYSNWELSANRANASRRELVAGGLNS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 ++ ++ G + ++ NRRI +LV + Sbjct: 233 GKMLRVVGMSDTMKLKNRGANDAVNRRISLLVLN 266 >gi|331006559|ref|ZP_08329851.1| Flagellar motor rotation protein MotB [gamma proteobacterium IMCC1989] gi|330419628|gb|EGG94002.1| Flagellar motor rotation protein MotB [gamma proteobacterium IMCC1989] Length = 325 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 58/318 (18%), Positives = 106/318 (33%), Gaps = 46/318 (14%) Query: 29 NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88 L +W +AD M++LM FF+++ + D K + F Q Sbjct: 13 GLPAWMATFADLMSLLMCFFVLLLSFSEMDAMKFKRLAGSMAQA-----------FGVQT 61 Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 + + K I + + + +K + ++ + + Sbjct: 62 QLKVTDVPKGTSIIAREFSPAIPEPTPINEIWQKTADITQMSLEVRQVEEYDVEAGDIDK 121 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 K K + + +++ + L Sbjct: 122 EAGVKLKI----------------------------KQQLEDLIRETQNDARELANDLRE 153 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268 + + ET I++ I ++ F S I + V+ I E + I + Sbjct: 154 QIVAGEIEIETDGRKIIVRIREK---GSFQSGSHIMNDDYYDVMDDIREAVLTKPGKIQV 210 Query: 269 RGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 +GHTD P R+ NW LS RA S Q LM V R ++SGFA + + ++ Sbjct: 211 QGHTDNIPIRSARYRSNWELSTARAVSVAQALMDGDVDPRRF-EVSGFADTQSLVDNNSE 269 Query: 328 --NSANRRIDILVEDRQG 343 S NRR++I++ G Sbjct: 270 ENRSRNRRVEIVIRQGLG 287 >gi|152980289|ref|YP_001353788.1| flagellar motor protein MotB [Janthinobacterium sp. Marseille] gi|151280366|gb|ABR88776.1| MotB chemotaxis protein [Janthinobacterium sp. Marseille] Length = 328 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 78/336 (23%), Positives = 139/336 (41%), Gaps = 61/336 (18%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 E + IIIK+ + G+WKI YADF+T +MAFFL+MW++ +T + I + Sbjct: 3 DEGLRPIIIKRIKKSGGGHH-GGAWKIAYADFVTAMMAFFLLMWLLGSTTKGDLQGIADF 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F+ K M G D + + ++ + + ++ K Sbjct: 62 FSTPLKVAMAGGSGSGDSSSVIKGGGKDMTRIDGQQKKGEDLTPAK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 ++ E +R Sbjct: 108 -----------------------------------NFNLKAAEAELERQEVNRLKALKER 132 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ D + +L + T G+ I I+D++N PMF + + P T Sbjct: 133 IEKAIDTIPGLQQ---------FKNQLLIDITTEGLRIQIVDEKNRPMFALARAELQPYT 183 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 V+L +I ++L IS+ GHTDA+P+ + NW LS DRA ++ + L+ G++E Sbjct: 184 KVILHEIAKILNDIPNRISLSGHTDATPYSSGEKSYSNWELSSDRANASRRELIAGGMAE 243 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++ ++ G + L +SDP+N NRRI I+V +++ Sbjct: 244 NKVLRVVGLSSAVLFDSSDPLNPVNRRISIIVLNKK 279 >gi|325928224|ref|ZP_08189430.1| flagellar motor protein [Xanthomonas perforans 91-118] gi|325541413|gb|EGD12949.1| flagellar motor protein [Xanthomonas perforans 91-118] Length = 324 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 107/326 (32%), Gaps = 57/326 (17%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q Sbjct: 3 RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAF----- 57 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 N K ++ Sbjct: 58 -----GGSSNKASPVQLGKTQTLGADYDRP------------------------------ 82 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 S+ + TD + +P + + + ++++ + ++ Sbjct: 83 -------SVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 +S TL+ L+ + + I + I +F S+ L + V Sbjct: 136 LSKTLAPLIDKQL---ITIRRNDLWIEVEINSD---ILFGTGSATLAGRARGTLSTLASV 189 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + G++ R++ + G+ Sbjct: 190 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGIAPQRLAMV-GYGE 248 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274 >gi|315126001|ref|YP_004068004.1| chemotaxis LafU protein [Pseudoalteromonas sp. SM9913] gi|315014515|gb|ADT67853.1| chemotaxis LafU protein [Pseudoalteromonas sp. SM9913] Length = 331 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 125/333 (37%), Gaps = 43/333 (12%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + +Q I+IK+ + G+WK+ +ADF +MAFF+VMWI+ T++ ++ I Y Sbjct: 2 ENKNQEIVIKRSRRRATEKPHGGAWKVAFADFTLAMMAFFMVMWIMAITNESEREEIAHY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 ++ IFD QN P + + Sbjct: 62 MRT--HSIFDGGPAIFDPQNSPFPVDLG--------------GSPSVIKHLESGITPPDS 105 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 Q + EK S S + LSKE Sbjct: 106 PKPGMSEVLQVPDGTVEPKAGQGEKLNSAIDSQFEASSELSLLLESIDELSKE------- 158 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + +L E G+ + I D ++ MF++S S P Sbjct: 159 --------------------ELLKNNLLVEEVPLGLRVIIRDDKHHQMFERSKSQMTPFF 198 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + +G ++ I I GH+DAS F + + NW +S DRA A +V+ G+ + Sbjct: 199 EDLFLYLGGLVKDINNKIIISGHSDASLFIDGSSRNWDISGDRAQQARKVMTMGGMPSSQ 258 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 + +++ F+ +R + S NRR+++L+ + Sbjct: 259 VLQVNAFSSNRPLNKENQKASENRRVELLILTK 291 >gi|260868487|ref|YP_003234889.1| MotB protein [Escherichia coli O111:H- str. 11128] gi|257764843|dbj|BAI36338.1| MotB protein [Escherichia coli O111:H- str. 11128] gi|323180688|gb|EFZ66233.1| chemotaxis protein motB [Escherichia coli 1180] Length = 308 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDLISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R MF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|54295159|ref|YP_127574.1| flagellar motor protein MotB [Legionella pneumophila str. Lens] gi|53754991|emb|CAH16479.1| hypothetical protein lpl2239 [Legionella pneumophila str. Lens] Length = 312 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 82/331 (24%), Positives = 137/331 (41%), Gaps = 63/331 (19%) Query: 14 FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 II +K+ +D + GSWKI +ADF+T +MAFFL+MW++ + + K I +YF Sbjct: 32 PII--RKIKKNDHKYHGGSWKIAFADFVTAMMAFFLLMWLVASLNKAQKAGIAEYFKRPM 89 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 K + + + + + + N D T + + + ++ Sbjct: 90 KVALFGGESMGNRKATIKGGGPNIEDTDGQVSATNKPLINESIAKDK------------- 136 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 E L L E L+M++ L Sbjct: 137 -----------------------------EIIESQANEIKKLEELKSEINLSMEKDPSLA 167 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 L K++ L + G+ I +ID + PMFD S PE +L Sbjct: 168 GLKKQL----------------LMDVVSDGLRIQLIDNQKKPMFDVGSDKINPEIEPILA 211 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 I ++L I+I+GHTDA+P+ N NW LS RA +A + L+K+G+ E+++ Sbjct: 212 NIAKLLNSVPNKITIQGHTDANPYHNPEELEYTNWELSAQRANAARRALIKAGMDENKVM 271 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G++ L +P N NRRI I+V + Sbjct: 272 TVTGYSSTVLLDKKNPYNPENRRISIIVMKK 302 >gi|21242652|ref|NP_642234.1| flagellar motor protein MotD [Xanthomonas axonopodis pv. citri str. 306] gi|21108121|gb|AAM36770.1| MotB protein [Xanthomonas axonopodis pv. citri str. 306] Length = 324 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 107/326 (32%), Gaps = 57/326 (17%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q Sbjct: 3 RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAF----- 57 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 N K ++ Sbjct: 58 -----GGSSNKASPVQLGKTQSLGADYDRP------------------------------ 82 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 S+ + TD + +P + + + ++++ + ++ Sbjct: 83 -------SVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 +S TL+ L+ + + I + I +F S+ L + V Sbjct: 136 LSKTLAPLIDKQL---ITIRRNDLWIEVEINSD---ILFGTGSATLAGRARGTLSTLAAV 189 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + G++ R++ + G+ Sbjct: 190 LREAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGIAPQRLAMV-GYGE 248 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274 >gi|157147077|ref|YP_001454396.1| hypothetical protein CKO_02854 [Citrobacter koseri ATCC BAA-895] gi|157084282|gb|ABV13960.1| hypothetical protein CKO_02854 [Citrobacter koseri ATCC BAA-895] Length = 315 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 130/334 (38%), Gaps = 52/334 (15%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 +N+ + IIK+ + G+WK+ +ADF +MA F+V+WI+ A ++ +K I Sbjct: 2 RNRSKEHTTIIKRSSRKSHDEFHGGAWKVAFADFTLAMMALFMVLWIMGAVTEEERKEIV 61 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 N ++ E +S I + + +D + T + + Sbjct: 62 SMLN---------------GESVFEGNSLTPITQKEGQGGQLSLIDSRHPKTPKPSKTAE 106 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + K+ + Sbjct: 107 SSKPLTD---------------------------------AEKQVAQQAKQTESLDDVNA 133 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + + ++DLA+ I S + + E G+ I + D + MF +SS+I P Sbjct: 134 RSRNEIEDLARIIMKITSTY---DAQANLKMEIVPQGLRILVSDDQKREMFQRSSAILTP 190 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVS 305 +L + L I I GHTDA+ FR+ +NW LS +RA A VL G+ Sbjct: 191 FFKRLLTEFAPELNKIDNKIIITGHTDATRFRDQVLYNNWNLSGERAMQARAVLTTGGLD 250 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +I ++SG A L P++SANRRI+I+V Sbjct: 251 QSKILQVSGMADQMLLDPQHPLSSANRRIEIMVL 284 >gi|259908189|ref|YP_002648545.1| Chemotaxis protein [Erwinia pyrifoliae Ep1/96] gi|224963811|emb|CAX55313.1| Chemotaxis protein [Erwinia pyrifoliae Ep1/96] gi|283478118|emb|CAY74034.1| Chemotaxis protein MotB (Motility protein B) [Erwinia pyrifoliae DSM 12163] Length = 343 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 77/334 (23%), Positives = 128/334 (38%), Gaps = 71/334 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + N + I++ K+ + GSWKI YADFMT +MAFFLVMW+I+ + I Y Sbjct: 2 KHNGRPIVLVKRKKSHKHVGSHGSWKIAYADFMTAMMAFFLVMWLISISSPQQLVQIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K +T + D +P ++ + + H Sbjct: 62 FKTPLKVALTGGQRSSDSSSPIPGGGRDPTEKIGEVH----------------------- 98 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 K DL+K +K + L L + ++ Sbjct: 99 ------------------------------KVADLDKQKSKLDEIRLNRLRENLDQLIEA 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 RL+ L + + +V + + I IID +N PMF S+ Sbjct: 129 DPRLRALRPHL---IINMVQEGLR-------------IQIIDSQNRPMFKTGSAEVESYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I +L IS+ GHTD P+ NW LS DRA ++ + L+ G++ Sbjct: 173 RDILRAIAPILNQIPNRISLAGHTDDFPYPGGERGYSNWELSADRANASRRELVAGGLNS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 ++ ++ G + ++ NRRI +LV + Sbjct: 233 GKMLRVVGMSDTMKLKNRGANDAVNRRISLLVLN 266 >gi|145297473|ref|YP_001140314.1| LafU [Aeromonas salmonicida subsp. salmonicida A449] gi|22758827|gb|AAN04225.1| LafU [Aeromonas salmonicida] gi|142850245|gb|ABO88566.1| LafU [Aeromonas salmonicida subsp. salmonicida A449] Length = 315 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 71/332 (21%), Positives = 132/332 (39%), Gaps = 48/332 (14%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 N + IIIK++ P G+WK+ +ADF +MAFF+V+WI+ + + ++A+ Sbjct: 3 NHEQIIIKRQQRRSSAPKGGGAWKVAFADFTLAMMAFFMVLWILAVSSQEEREAVASRLR 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 ++M + FD N P + S+ E ++ V+ Sbjct: 63 D--YSIMDSEANPFDISNSPYPVDLG-GNPSVLEELSPKFVE------------------ 101 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + +E++ + + + ++ + Sbjct: 102 ------------------------EGQRMPKHMERNRSIFSDGVSGGYENLLVGKIEGEA 137 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +++ LA I S + + + G+ I I D M+ + S+ P Sbjct: 138 QMKQLAGFIGSLADQM---QAKNNLELQLVPQGLRILIRDDDEREMYSRGSARISPFFRH 194 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L + + + I GHTD++PF NW LS DRA A +VL+ G+ +R+ Sbjct: 195 MLMALAPIFQRVENRVMISGHTDSTPFAGDNYSNWELSSDRAMMARRVLLAGGMPPERVG 254 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ + L+ +DP S NRRI++LV Q Sbjct: 255 QVVAMSDTMLENTADPRGSENRRIELLVMTSQ 286 >gi|296282270|ref|ZP_06860268.1| OmpA/MotB domain-containing protein [Citromicrobium bathyomarinum JL354] Length = 273 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 73/330 (22%), Positives = 128/330 (38%), Gaps = 66/330 (20%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 +N II+KK + + ++ G+WK+ YADF+T +MAFFL+MW++ AT +D ++ + YF Sbjct: 7 DNLPPIIVKKV-TVVEGGHHGGAWKVAYADFVTAMMAFFLLMWLLGATTEDQRRGLADYF 65 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 P + + G Sbjct: 66 TPTLVKVKDSGAGANG-------------------------------------------- 81 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 L + + R + G +E + ++ +++ Sbjct: 82 ----LLSGASLTDVDDYPNRQGQTGNKGLTVPRDAMGGPREAARMIERITSRTKDRLEKD 137 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 RL L +I T G+ I ++D + MF+ +++ + Sbjct: 138 PRLAKLMSQIK----------------MVDTTEGVRIDLVDDADFSMFNLGTTVLTRDAA 181 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L I + + I +RGHTD+ ++N R +NW LS RA + Q LM G+ +D Sbjct: 182 ELLAAIAQAIEPEKREIIVRGHTDSLKWKNPGRINNWSLSAGRAEATRQTLMNEGIPDDS 241 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILV 338 +I G A L + DP + NRRI I++ Sbjct: 242 FRRIEGVADTELLVKDDPADPRNRRISIVL 271 >gi|163800113|ref|ZP_02194014.1| chemotaxis LafU protein [Vibrio sp. AND4] gi|159175556|gb|EDP60350.1| chemotaxis LafU protein [Vibrio sp. AND4] Length = 330 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 71/331 (21%), Positives = 126/331 (38%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ A D ++ G+WK+ +ADFM LMA FLV+W++ D + +KAI + + Sbjct: 3 KQEHVVFKRAKAHDHDESHGGAWKVAFADFMIALMALFLVLWVMQVVDKEDRKAIVAHLH 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + Q S + IDL+ D + + S+ + E + Sbjct: 63 SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSQHNSNHVVSSFFQGDGDGPEMD 116 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 N ++ Sbjct: 117 SLIPGN-------------------------------------------------FDTQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK I + + V T G+ I + D MF++ + P Sbjct: 128 QLALLAKVIDKVVGQIS---AQDNVNVTITPQGLRIVLQDDYMQHMFNRGGAELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + V + I GHTD++PF+ + NW LS RA A L++ G+ +DR Sbjct: 185 LLLALAPVFERINNPLIISGHTDSTPFKQRVGRKSNWALSASRADVARNTLVEGGMPDDR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L +P +S NRRI++ + Sbjct: 245 VMQVTGMSDRALLNREEPDSSENRRIELFIL 275 >gi|294624200|ref|ZP_06702921.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665070|ref|ZP_06730375.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292601500|gb|EFF45516.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605151|gb|EFF48497.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 324 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 107/326 (32%), Gaps = 57/326 (17%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q Sbjct: 3 RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAF----- 57 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 N K ++ Sbjct: 58 -----GGSSNKASPVQLGKTQSLGADYDRP------------------------------ 82 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 S+ + TD + +P + + + ++++ + ++ Sbjct: 83 -------SVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 +S TL+ L+ + + I + I +F S+ L + V Sbjct: 136 LSKTLAPLIDKQL---ITIRRNDLWIEVEINSD---ILFGTGSATLAGRARGTLSTLASV 189 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + G++ R++ + G+ Sbjct: 190 LREAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGIAPQRLAMV-GYGE 248 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274 >gi|289667244|ref|ZP_06488319.1| flagellar motor protein MotD [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 324 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 107/326 (32%), Gaps = 57/326 (17%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q Sbjct: 3 RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAF----- 57 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 N K +H + Sbjct: 58 -----GGSSNKASPVQLGKTQSLGADHDRPS----------------------------- 83 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + + TD + +P + + + ++++ + ++ Sbjct: 84 --------VIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 +S TL+ L+ + + I + I +F S+ L + V Sbjct: 136 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALASNARTTLSTLASV 189 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + GV+ R++ + G+ Sbjct: 190 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 248 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274 >gi|168234012|ref|ZP_02659070.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205331986|gb|EDZ18750.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 309 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 72/333 (21%), Positives = 119/333 (35%), Gaps = 71/333 (21%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 +++K++ GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 6 HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 +T I + ++P + + N +LK Sbjct: 66 PLATAVTGGNRIANSESPIPGGGDDYTQQQGEVEKQPNIDELK----------------- 108 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + E L L + ++ + Sbjct: 109 ------------------------------------KRMEQSRLNKLRGDLDQLIESDPK 132 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L+ L + L V + + ++ R MF S+ P + Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMRDI 176 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L+ I VL IS+ HTD P+ N NW LS DRA ++ + L+ G+ ++ Sbjct: 177 LRAIAPVLNGIPNRISLARHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKV 236 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ G A P ++ NRRI +LV ++Q Sbjct: 237 LRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 269 >gi|218548503|ref|YP_002382294.1| flagellar motor protein MotB [Escherichia fergusonii ATCC 35469] gi|218356044|emb|CAQ88660.1| protein that enables flagellar motor rotation [Escherichia fergusonii ATCC 35469] gi|324113675|gb|EGC07650.1| OmpA family protein [Escherichia fergusonii B253] gi|325496923|gb|EGC94782.1| flagellar motor protein MotB [Escherichia fergusonii ECD227] Length = 304 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 77/337 (22%), Positives = 124/337 (36%), Gaps = 72/337 (21%) Query: 9 QENDQFIII-KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 + DQ II+ K++ + GSWKI YADFMT +MAFFLVMW+I+ + I + Sbjct: 2 KNRDQPIIVVKRRKPKNHGGAGHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YF +T I + Q+P + + + + +LK Sbjct: 62 YFRTPLATAITGGDRISNSQSPIPGGGDDYTQQQGEVNRQPSIEELK------------- 108 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 E L L + ++ Sbjct: 109 ----------------------------------------KHMEQSRLNRLRGDLDQLIE 128 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +L+ L + + V + + ++ PMF S+ P Sbjct: 129 SDPKLRALRPHLKIDM---VQEGLRIQIIDSQN-------------RPMFKTGSADVEPY 172 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L+ I VL IS+ GHTD P+ N NW LS DRA ++ + LM G+ Sbjct: 173 MRDILRAIAPVLNGIPNRISLAGHTDDYPYANGERGYSNWELSADRANASRRELMVGGLE 232 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A ++ NRRI +LV ++Q Sbjct: 233 EGKLLRVVGMAATMRLSDRGGNDAINRRISLLVLNKQ 269 >gi|156976178|ref|YP_001447084.1| flagellar motor protein [Vibrio harveyi ATCC BAA-1116] gi|156527772|gb|ABU72857.1| hypothetical protein VIBHAR_04949 [Vibrio harveyi ATCC BAA-1116] Length = 330 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 125/331 (37%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ A + + G+WK+ +ADFM LMA FLV+W++ D + +KAI + + Sbjct: 3 KQEHVVFKRAKAHNHDEFHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + Q S + IDL+ D + + S+ + E + Sbjct: 63 SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSFFQGDGDGPEID 116 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 N E Sbjct: 117 SLIPGNFDTQE------------------------------------------------- 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK I + + A V T G+ I + D MF + + P Sbjct: 128 QLALLAKVIDEVVGQISAQG---NVNVTITPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + V + + I GHTD++PF+ + NW LS RA A L++ G+ +DR Sbjct: 185 LLLALAPVFERISNPLFISGHTDSTPFKKRFGRQSNWALSASRADVARNTLVEGGMPDDR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L +P +S NRRI++ + Sbjct: 245 VMQVTGMSDRALLNPEEPDSSENRRIELFIL 275 >gi|300904777|ref|ZP_07122605.1| chemotaxis protein MotB [Escherichia coli MS 84-1] gi|301305233|ref|ZP_07211330.1| chemotaxis protein MotB [Escherichia coli MS 124-1] gi|300403291|gb|EFJ86829.1| chemotaxis protein MotB [Escherichia coli MS 84-1] gi|300839439|gb|EFK67199.1| chemotaxis protein MotB [Escherichia coli MS 124-1] gi|315257277|gb|EFU37245.1| chemotaxis protein MotB [Escherichia coli MS 85-1] Length = 308 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R MF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMCLSDRGPDDAVNRRISLLVLNKQ 268 >gi|311992352|gb|ADQ26749.1| MotB-1 [Aeromonas hydrophila] Length = 298 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 55/325 (16%), Positives = 112/325 (34%), Gaps = 45/325 (13%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 P L + +AD M++LM FF+++ D K I Sbjct: 2 KCKCPPPGLPGYMGTFADLMSLLMCFFVLLLSFAEMDVQKFKQIAGSME----------- 50 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 F QN E K I + + T ++ + + + Sbjct: 51 KAFGVQNILEVKDIPKGTSVIAQEFRPGRPEPTPIDTIMQQTMDMTQTELDFQPGDADLA 110 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 +K E + ++++ +++++ LAK ++ Sbjct: 111 GGH-----------------------DKSEEKLVGGDTQQEAQKQQQQEQSNALAKALAD 147 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + + D + E I+I I ++ F S+ P+ V++K+ +L Sbjct: 148 QMKAQIQDGA---IEVEALGQQIIIRIREKAA---FPAGSAFLQPQFWPVVRKVAALLKD 201 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 I++ GHTD + + + NW LS RA + ++K G R+ + G A + Sbjct: 202 VPGEITVSGHTDDAATEDELFQSNWELSSQRAVAVAHQMIKVPGFDGGRLV-VQGMADSQ 260 Query: 320 LKIASDPMNSA--NRRIDILVEDRQ 342 + + + NRR++I + + Sbjct: 261 PLVPNTSPENRRMNRRVEISIMQGK 285 >gi|297538877|ref|YP_003674646.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301] gi|297258224|gb|ADI30069.1| OmpA/MotB domain protein [Methylotenera sp. 301] Length = 311 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 83/337 (24%), Positives = 142/337 (42%), Gaps = 61/337 (18%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 +E + II+K K+ ++ G+WKI YADF+T +MAFFL+MW++ +T + K I Y Sbjct: 3 EERVRPIIVK-KIKKGGGGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTSKEQKAGISDY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN +T + + + TK S +K K+ Sbjct: 62 FNTPLMVALTGGTAVGASDTLIKGG--------GGKDFTKKSGQVKKIDGADGKKTS--- 110 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + +K L Sbjct: 111 ----------------------------------------------IDAEEAKKALEQAE 124 Query: 189 KKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 K +L++L KKI + +L + T G+ + I+D++N MF+ S + P Sbjct: 125 KVKLEELKKKIEKAIDDSPTLSKFKNQLLLDITSDGLRVQIVDEQNRAMFNSSKAEMQPY 184 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +LQ++G+ L IS+ GHTDA+P+ N NW LS DRA ++ + L+ G+ Sbjct: 185 AKQILQELGKTLNDVPNKISLSGHTDATPYPNGEKSYSNWELSSDRANASRRELVAGGMD 244 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G + L +P ++ NRRI I++ ++Q Sbjct: 245 ETKLLRVVGLSSASLFNKENPFDATNRRISIIIMNKQ 281 >gi|71280941|ref|YP_267837.1| flagellar motor protein MotB [Colwellia psychrerythraea 34H] gi|71146681|gb|AAZ27154.1| sodium-driven polar flagellar protein [Colwellia psychrerythraea 34H] Length = 314 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 107/306 (34%), Gaps = 29/306 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 P L +W +AD M++LM FF+++ + D K I Sbjct: 4 QQCKCPPPGLPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 52 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + Q++ + + + + + + S Sbjct: 53 KFAFGVQNKIEVKDIPKGTSIIAQEFRPGKPEPTPIEVIQQQTMEMTQQMLEFQAGDETS 112 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + G+ L + ++ + ++++ +L KKI+ Sbjct: 113 AGGRQEQRGTERGGQSQNTEDALSQQ---------ALDQAKQDMEEAAQEQVNELVKKIA 163 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + D + E+ ++I I + F S+ P+ V+++IGE+L Sbjct: 164 EQLEQQIQDGA---IELESLGQQVIIRIREN---GSFPSGSAFLQPKFWPVIREIGELLN 217 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 I I GHTD + NW LS RA + L+K R+ G A Sbjct: 218 TVPGEIMISGHTDNRGVDSELFSSNWDLSSKRAVAIAHQLIKVPDFDATRLVAA-GHADT 276 Query: 319 RLKIAS 324 R + + Sbjct: 277 RPLVPN 282 >gi|117621021|ref|YP_857806.1| flagellar motor protein MotB [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562428|gb|ABK39376.1| sodium-driven polar flagellar protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 299 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 112/325 (34%), Gaps = 45/325 (13%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 P L + +AD M++LM FF+++ D K I Sbjct: 3 KCKCPPPGLPGYMGTFADLMSLLMCFFVLLLSFAEMDVQKFKQIAGSME----------- 51 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 F QN E K I + + T ++ + + + Sbjct: 52 KAFGVQNILEVKDIPKGTSVIAQEFRPGRPEPTPIDTIMQQTMDMTQTELDFQPGDADQA 111 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 +K E + ++++ +++++ LAK ++ Sbjct: 112 GGH-----------------------DKSEEKLVGGDTQQEAQKQQQQEQSNALAKALAD 148 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + + D + E I+I I ++ F S+ P+ V++K+ +L Sbjct: 149 QMKAQIQDGA---IEVEALGQQIIIRIREKAA---FPAGSAFLQPQFWPVVRKVAALLKD 202 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 I+I GHTD + + + NW LS RA + ++K G R+ + G A + Sbjct: 203 VPGEITISGHTDDAATEDELFQSNWELSSQRAVAVAHQMIKVPGFDGGRLV-VQGMADSQ 261 Query: 320 LKIASDPMNSA--NRRIDILVEDRQ 342 + + + NRR++I + + Sbjct: 262 PLVPNTSPENRRMNRRVEISIMQGK 286 >gi|218699541|ref|YP_002407170.1| flagellar motor protein MotB [Escherichia coli IAI39] gi|218369527|emb|CAR17296.1| protein that enables flagellar motor rotation [Escherichia coli IAI39] Length = 308 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 121/335 (36%), Gaps = 71/335 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R MF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G++ Sbjct: 173 RDILRAIAPVLNGIPNCISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ ++ G A P ++ NRRI +LV ++ Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNK 267 >gi|166711987|ref|ZP_02243194.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzicola BLS256] Length = 324 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 57/326 (17%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q T Sbjct: 3 RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAFGGSST 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 A+ + + Sbjct: 63 AANPVQLGKTQTLG---------------------------------------------- 76 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 +++ + S+ + TD + +P + + + ++++ + ++ Sbjct: 77 -ADYDRPSVIKAGAPMAASNGPTDPSLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 +S TL+ L+ + + I + I +F S+ L + V Sbjct: 136 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALAGNARTTLSTLASV 189 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + GV+ R++ + G+ Sbjct: 190 LREAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 248 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274 >gi|329298550|ref|ZP_08255886.1| OmpA/MotB domain-containing protein [Plautia stali symbiont] Length = 319 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 125/335 (37%), Gaps = 72/335 (21%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 N +++K++ ++ GSWKI YADFMT ++AFF+VMW+I+ + I + Sbjct: 2 KHGNRPIVLVKRRKHKKHEGSH-GSWKIAYADFMTAMVAFFMVMWLISIANPQELVQIAE 60 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YF K +T + D ++P + + Sbjct: 61 YFKTPLKVALTGGQRSSDSESPIPGGGDDPTQKKGEVQKQ-------------------- 100 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 D++ + ++ L L ++ ++ Sbjct: 101 ---------------------------------VDMDAQKRQLDDIRLNRLREKLDQLIE 127 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 RL+ L + + +V + + + ID +N PMF S+ P Sbjct: 128 ADPRLKALRPHL---IINMVEEGLRIQI-------------IDSQNRPMFKTGSAEVEPY 171 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L+ I +L IS+ GHTD + + NW LS DRA ++ + L+ G+ Sbjct: 172 MRDILRVIAPLLNDIPNKISLSGHTDDFQYASGDRGYSNWELSADRANASRRELVAGGLD 231 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 ++ ++ G A ++ NRRI +LV + Sbjct: 232 GGKMLRVVGMADTMKLKNRGANDAVNRRISLLVLN 266 >gi|323948225|gb|EGB44213.1| OmpA family protein [Escherichia coli H120] Length = 308 Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R MF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFKTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV +++ Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKE 268 >gi|325923665|ref|ZP_08185290.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865] gi|325545864|gb|EGD17093.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865] Length = 404 Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 77/332 (23%), Positives = 142/332 (42%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E ++I++ + ++ G+WK+ +ADF+T +MAFFLV+W++ AT + + AI +YF Sbjct: 3 EGKSTVVIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 P ++ ++ +K+G T + Q+ E Sbjct: 63 RNP----------------SPLSGKSPAPSPGMNGPGGASTSMIKLGGTADMAKGQKDEM 106 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + +E + K K Sbjct: 107 GRKRDNAADTTEDSR-----------------------------------------AKDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 KRL+ L + + + + +L + T G+ I I+D++N PMFD P T Sbjct: 126 KRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 + +L+++ + ISI GHTD + + + A NW LS DRA +A + L+ G+++ Sbjct: 186 VDILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMADA 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++++ G + L ++P N NRRI I+V Sbjct: 246 KVTRVVGLSSSVLFDKTNPQNPINRRISIVVM 277 >gi|84624345|ref|YP_451717.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84368285|dbj|BAE69443.1| MotB protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 324 Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 57/326 (17%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q T Sbjct: 3 RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAFGGSST 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 A+ + + Sbjct: 63 AASPVQLGKTQTLG---------------------------------------------- 76 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 +++ + S+ + TD + +P + + + ++++ + ++ Sbjct: 77 -ADYDRPSVIKAGAPMAASNGPTDPSLLPSMAAQMRMPVSLRNQTQLARAQRQMDAVEQQ 135 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 +S TL+ L+ + + I + I +F S+ L + V Sbjct: 136 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALAGNARTTLSTLASV 189 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + GV+ R++ + G+ Sbjct: 190 LREAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 248 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274 >gi|330901956|gb|EGH33293.1| flagellar motor protein MotB [Pseudomonas syringae pv. japonica str. M301072PT] Length = 302 Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 77/335 (22%), Positives = 129/335 (38%), Gaps = 65/335 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W++++ + A Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLA----- 55 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + P S + ID + + + + Sbjct: 56 -------------VAGYFKDPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVQTTPSPDTV 102 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 I + E + Sbjct: 103 PI--------------------------------------------EAENAETKAEAVEQ 118 Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 119 ERLEMLLQELQTKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYF 178 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + + + +SI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 179 EDILLALADTIKSVPNKVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDS 238 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 239 QVARVVGYASSALYDRQNPTNPINRRIDIVVLTKK 273 >gi|194434087|ref|ZP_03066356.1| chemotaxis protein MotB [Shigella dysenteriae 1012] gi|300951513|ref|ZP_07165348.1| chemotaxis protein MotB [Escherichia coli MS 116-1] gi|194417631|gb|EDX33731.1| chemotaxis protein MotB [Shigella dysenteriae 1012] gi|300449263|gb|EFK12883.1| chemotaxis protein MotB [Escherichia coli MS 116-1] gi|332095082|gb|EGJ00116.1| chemotaxis protein motB [Shigella dysenteriae 155-74] Length = 308 Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 120/336 (35%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R F S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM GV Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGVDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|304396266|ref|ZP_07378148.1| OmpA/MotB domain protein [Pantoea sp. aB] gi|304356635|gb|EFM21000.1| OmpA/MotB domain protein [Pantoea sp. aB] Length = 313 Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 72/335 (21%), Positives = 123/335 (36%), Gaps = 72/335 (21%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 N ++IKK+ ++ GSWKI YADFMT +MAFF+VMW+++ + I Sbjct: 2 KHGNRPIVLIKKRKHKGHEGSH-GSWKIAYADFMTAMMAFFMVMWLLSIANPQELVQIAD 60 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YF K +T + D +P + + Sbjct: 61 YFKTPLKIAITGGQRSSDSTSPIPGGGDDPTKKIGE------------------------ 96 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + K D++ K + L L ++ ++ Sbjct: 97 -----------------------------VNKVVDMDAQKRKLDEIRLNRLREKLDQLIE 127 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 RL+ L + + +V + + + ID +N PMF + P Sbjct: 128 ADPRLKTLRPHL---IINMVEEGLRIQI-------------IDSQNRPMFKTGRAEVEPY 171 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L+ I +L IS+ GHTD + + NW LS DRA ++ + L+ G+ Sbjct: 172 MRDILRAIAPILNDIPNRISLAGHTDDFQYASGDKGYSNWELSADRANASRRELVIGGLD 231 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 +I ++ G A ++ NRRI +LV + Sbjct: 232 SGKILRVLGMADTMSLKNRGGNDAVNRRISLLVLN 266 >gi|58580310|ref|YP_199326.1| flagellar motor protein MotB [Xanthomonas oryzae pv. oryzae KACC10331] gi|188578754|ref|YP_001915683.1| flagellar motor protein MotB [Xanthomonas oryzae pv. oryzae PXO99A] gi|58424904|gb|AAW73941.1| chemotaxis MotB protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|188523206|gb|ACD61151.1| chemotaxis MotB protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 377 Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +II++ + ++ G+WK+ +ADF+T +MAFFLV+W++ AT + + AI +YF Sbjct: 3 EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +P S S+ G+ + K + Sbjct: 63 RNP---------------SPLSGKSMAPSPGMNGPGGASTSMIKLGGTADMAKGQKDEMG 107 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + K K Sbjct: 108 RKRDNAADTTEDSRS------------------------------------------KDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 KRL+ L +++ + + +L + T G+ I I+D++N PMFD P T Sbjct: 126 KRLETLMQELKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 + +L ++ + ISI GHTD + + + A NW LS DRA +A + L+ G+S+ Sbjct: 186 VAILHELSNFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMSDA 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++++ G + L +DP N NRRI I+V Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277 >gi|84622281|ref|YP_449653.1| flagellar motor protein MotB [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366221|dbj|BAE67379.1| chemotaxis MotB protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 385 Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +II++ + ++ G+WK+ +ADF+T +MAFFLV+W++ AT + + AI +YF Sbjct: 3 EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +P S S+ G+ + K + Sbjct: 63 RNP---------------SPLSGKSMAPSPGMNGPGGASTSMIKLGGTADMAKGQKDEMG 107 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + K K Sbjct: 108 RKRDNAADTTEDSRS------------------------------------------KDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 KRL+ L +++ + + +L + T G+ I I+D++N PMFD P T Sbjct: 126 KRLETLMQELKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 + +L ++ + ISI GHTD + + + A NW LS DRA +A + L+ G+S+ Sbjct: 186 VEILHELSNFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMSDA 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++++ G + L +DP N NRRI I+V Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277 >gi|323968311|gb|EGB63718.1| OmpA family protein [Escherichia coli M863] gi|327253019|gb|EGE64673.1| chemotaxis protein motB [Escherichia coli STEC_7v] Length = 308 Score = 166 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGTAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R MF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDG 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|239906259|ref|YP_002952999.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1] gi|239796124|dbj|BAH75113.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1] Length = 341 Score = 166 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 116/340 (34%), Gaps = 28/340 (8%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K +D W I AD MT+L+ FFL++ ++ D + + + Sbjct: 8 RKRRHEDED----LWPISLADMMTLLLCFFLLIVAVSHVDLNRYERVADSMQQAMVQEKP 63 Query: 79 ASKG-------IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 A K + D+ PP + S H T + + + + + Sbjct: 64 APKKKTAETAPVTDKTAPPPLPFEKPQVRSKVSHTTLSREPAPLYEQPAQGPQAADASKL 123 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR--K 189 Q E K + + ++ + E + + + Sbjct: 124 GEPHPGQPQEPAKAAEPTKPGEPAKTPEAAKPGEQPKGTEPAKADATADATAEKAPKPGE 183 Query: 190 KRLQDLAKKISSTLSGL--VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +R K + L D V G+ +++ R FD +S+ P Sbjct: 184 ERTGPTRKSLDDIRKELSGKLDVTAGAVEVRPRDNGVELNL---RGAAFFDLASAEVKPG 240 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSE 306 I +L+ I LA + +++ GHTD P + NW LS RA + L+ GV+ Sbjct: 241 GIPLLRDIAATLAGTPYKVTVEGHTDNLPMESWLYPSNWELSSARASRVARFLIDHGVAR 300 Query: 307 DRISKISGFAHHRLKIASDPMN--------SANRRIDILV 338 D + ++ G A + + + NRR+ ILV Sbjct: 301 DHL-RVEGLADTQPVAPNTDPAGRSIPENQARNRRVVILV 339 >gi|68164502|gb|AAY87231.1| predicted flagellar motor protein [uncultured bacterium BAC17H8] Length = 385 Score = 166 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 61/367 (16%), Positives = 113/367 (30%), Gaps = 58/367 (15%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--------FGKNLM 77 P +W +AD T+LMAFF+++ + K I Sbjct: 21 PPVGAPAWMATFADMATLLMAFFVLILSFAEFNVPKFKQISGSLKNAFGVQKIVPIVEQP 80 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + + +P S + +TK +++K +Q I Sbjct: 81 KGTTVLSLNFSPSPSPSVTQDMTQQTTDVTKPDLEVKQRDKDQDGGESDGAEEIVKALED 140 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL----- 192 + + + ++ + L + K K A K ++ + Sbjct: 141 AIARGDIEVEVLGENVVVNFTPTEAKDEELPNLLQETLEAIDKAKKAAGKAEQEVLFGGL 200 Query: 193 -----------------------------------QDLAKKISSTLS-GLVADNIVKGVL 216 + A+ L L + V Sbjct: 201 EQKLAQLAAAADAAIQSGKAASAEAKAEAEQQKASNEKAEIAEDDLKVALRQEIGQGLVA 260 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 + ++I++ F S+ ++++I V + I++ GHTD P Sbjct: 261 VDRQEDKVIITVG---AGGAFPSGSAELTEAARKIMEEIAGVNEAGSGEITVSGHTDDVP 317 Query: 277 --FRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSA--N 331 F + RDNW L+ RA S Q L +G V R+ +S F + ++D N Sbjct: 318 LIFGSQFRDNWDLAAARAASVVQALEDTGKVPAGRMQAVS-FGESQPVESNDTARGRATN 376 Query: 332 RRIDILV 338 RRI+I + Sbjct: 377 RRIEIEI 383 >gi|146312113|ref|YP_001177187.1| flagellar motor protein MotB [Enterobacter sp. 638] gi|145318989|gb|ABP61136.1| OmpA/MotB domain protein [Enterobacter sp. 638] Length = 309 Score = 166 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 124/334 (37%), Gaps = 71/334 (21%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +I+KK+ + GSWKI YADFMT +MAFFLVMW+++ + I +YF Sbjct: 5 SHPIVIVKKRKHKGHGHGSHGSWKIAYADFMTAMMAFFLVMWLVSISSPKELIQIAEYFR 64 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 +T I + ++P + + N +LK Sbjct: 65 TPLATAITGGPRISNSESPIPGGGDDFTQQKGEVKKEPNIDELK---------------- 108 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + E L L + ++ Sbjct: 109 -------------------------------------KRMEQARLKKLRGDLDQLIEADP 131 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L+ L + L G+ I IID +N PMF S+ Sbjct: 132 KLRALRPHLKIDLVQE----------------GLRIQIIDSQNRPMFKTGSAEVEYYMRD 175 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ I VL IS+ GHTD + N NW LS DRA ++ + L+ G+ + + Sbjct: 176 ILRGIAPVLNGIPNHISLSGHTDDFQYANGEKGYSNWELSADRANASRRELVAGGLDDGK 235 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ G + P ++ NRRI +LV ++Q Sbjct: 236 VLRVVGMSSSMRVTDRGPEDAVNRRISLLVLNQQ 269 >gi|209767218|gb|ACI81921.1| chemotaxis protein MotB [Escherichia coli] gi|320647103|gb|EFX15936.1| flagellar motor protein MotB [Escherichia coli O157:H- str. 493-89] gi|320652386|gb|EFX20684.1| flagellar motor protein MotB [Escherichia coli O157:H- str. H 2687] Length = 308 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGCGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R MF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|117928060|ref|YP_872611.1| OmpA/MotB domain-containing protein [Acidothermus cellulolyticus 11B] gi|117648523|gb|ABK52625.1| OmpA/MotB domain protein [Acidothermus cellulolyticus 11B] Length = 290 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 61/325 (18%), Positives = 108/325 (33%), Gaps = 67/325 (20%) Query: 23 IDDTPNNLG---SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + W + Y D +T+LM F+V++ I+ D + Sbjct: 15 QHAEGGHGPSHERWLLTYTDMVTLLMVLFIVLFAISVVDKKKFAELAD------------ 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 G+ + + + + + G T Q Q N ++ Sbjct: 63 --GLAHQFGSTPKV------------LPAGTGVMDGGKTANHDQGQLTNNPDQPIAPISD 108 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 +E + + ++ D ++I Sbjct: 109 AEQSHAQPSAQASASAAANA----------------------------ERETFLDAERRI 140 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L + V F G+++SI+ + +FD + P VL I VL Sbjct: 141 EAALQA---KGLADSVKFRVETRGLIVSIV--TDQVLFDTGKADLRPIGRQVLDAIAPVL 195 Query: 260 AHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317 IS+ GHTD P NW LS RA + + L+ + G+ E+R+S +G+A Sbjct: 196 RGLPNDISVEGHTDNVPITGGPFASNWELSAIRATTVLRYLVSNDGLPEERMSA-TGYAD 254 Query: 318 HRLKIASDPM--NSANRRIDILVED 340 R + +D NRR+DI+V Sbjct: 255 TRPLVPNDTPEHRQQNRRVDIVVLS 279 >gi|166713570|ref|ZP_02244777.1| flagellar motor protein MotB [Xanthomonas oryzae pv. oryzicola BLS256] Length = 385 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +II++ + ++ G+WK+ +ADF+T +MAFFLV+W++ AT + + AI +YF Sbjct: 3 EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +P S S+ G+ + K + Sbjct: 63 RNP---------------SPLSGKSMAPSPGMNGPGGASTSMIKLGGTADMAKGQKDEMG 107 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + K K Sbjct: 108 RKRDNAADTTEDSRS------------------------------------------KDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 KRL+ L +++ + + +L + T G+ I I+D++N PMFD P T Sbjct: 126 KRLETLMQELKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 + +L ++ + ISI GHTD + + + A NW LS DRA +A + L+ G+S+ Sbjct: 186 VAILHELSNFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMSDA 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++++ G + L +DP N NRRI I+V Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277 >gi|220934517|ref|YP_002513416.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995827|gb|ACL72429.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 305 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 117/328 (35%), Gaps = 59/328 (17%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 ++ + N +W I Y D +T+L+AFF+VM+ I++ ++ + + + Sbjct: 3 RRSRKHHEEHVNHEAWAIPYGDLITLLLAFFVVMYAISSVNEGKYRVLSDSLVAAFRAPP 62 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 +++ P + + +++ T++ L +G+ + Sbjct: 63 KSTE-------PIQIGEVGRPAPEMEQQQTRSLAPLDLGAAPAQPGV------------- 102 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 I++ + L + + + LA Sbjct: 103 -----------------------------IDRGMDDLLRDAELDADELQAAAEGMSRLAD 133 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 +I + L+ ++ + R I + I + +F S+ E + VLQ++ Sbjct: 134 EIERAMLPLMDADL---IRMRRDRFWIEVEIN---TSLLFASGSAQLSSEAVPVLQRLAT 187 Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 +L I + G TD P NW LS RA S + ++ + R++ I G+ Sbjct: 188 ILRDFPARIQVEGFTDTVPINTPIFPSNWELSAARAASVVNLFSRNQLDPTRMAAI-GYG 246 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 +R +D NRR+ I+V + Sbjct: 247 EYRPIADNDTAEGRRQNRRVSIVVLAER 274 >gi|82702437|ref|YP_412003.1| flagellar motor protein MotB [Nitrosospira multiformis ATCC 25196] gi|82410502|gb|ABB74611.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196] Length = 308 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 77/333 (23%), Positives = 133/333 (39%), Gaps = 62/333 (18%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 I+IKK + G WKI YADF+T +MAFFL+MW++ + + I YF Sbjct: 5 QHRIVIKKVRRQSQG--HGGQWKIAYADFVTAMMAFFLLMWLLGSATRAQLQGISDYFMK 62 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 +++ G D + + ++ + T Sbjct: 63 PLESVPERDIGSGDRTSLIQGGGKDLMRRDGQVQKT------------------------ 98 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 D + + + + + + L L + ++ Sbjct: 99 ------------------DVDSSEKPLSLRAAQLELERRDARRLEDLKRRLERLIESNPT 140 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + + K++ L + T G+ I IID +N PMF + + P T + Sbjct: 141 MHEFRKQL----------------LLDITTEGLRIQIIDDKNRPMFALARAELEPHTREI 184 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 LQK+G VL +S+ GHTD++P+ + NW LS DRA ++ + L+ G++E +I Sbjct: 185 LQKLGSVLNEMPNKLSLSGHTDSTPYASGEKNYSNWELSADRANASRRELILGGMNEQKI 244 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ G + L +DP N NRRI I+V + Sbjct: 245 MRVVGLSSAVLFDRNDPTNPVNRRISIIVMSNR 277 >gi|58582454|ref|YP_201470.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzae KACC10331] gi|58427048|gb|AAW76085.1| MotB protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 286 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 57/326 (17%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q T Sbjct: 3 RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAFGGSST 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 A+ + + Sbjct: 63 AASPVQLGKTQTLG---------------------------------------------- 76 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 +++ + S+ + TD + +P + + + ++++ + ++ Sbjct: 77 -ADYDRPSVIKAGAPMAASNGPTDPSLLPSMAAQMRMPVSLRNQTQLARAQRQMDAVEQQ 135 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 +S TL+ L+ + + I + I +F S+ L + V Sbjct: 136 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALAGNARTTLSTLASV 189 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + GV+ R++ + G+ Sbjct: 190 LREAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 248 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274 >gi|294013095|ref|YP_003546555.1| chemotaxis MotB protein [Sphingobium japonicum UT26S] gi|292676425|dbj|BAI97943.1| chemotaxis MotB protein [Sphingobium japonicum UT26S] Length = 351 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 74/337 (21%), Positives = 128/337 (37%), Gaps = 58/337 (17%) Query: 3 SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62 N+ + II+KK V ++ G+WK+ YADF+T +MAFFL+MW++ AT + + Sbjct: 4 KKRGANEPEPRPIIVKKIVVEGHGGHHGGAWKVAYADFVTAMMAFFLLMWLLGATTEKQR 63 Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 K + YF P L S G +++ + + ++ T + Sbjct: 64 KGLADYFTPTLVQLKEGSAGSNGMFGGDSMTAKENYPTTGGQGNLAITIPRDASGTKDQG 123 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 K+ + + KE Sbjct: 124 G-----------------------------------------KATKAADRAKFESIRKEL 142 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 M R++ ++ L K I F T G+ I +ID+ + MF + Sbjct: 143 EARMARRQGIRKLLKNIR----------------FTETHEGLRIDLIDEADFAMFAMGTD 186 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMK 301 LP+ ++ ++ + + +RGHTD P+ +NW LS RA + + L Sbjct: 187 RLLPQARELVNEVAATIRTMPNPLIVRGHTDGLPYSAGQTMNNWMLSSARAEATRKALAA 246 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 SG+ DR ++I G A D + NRR+ I++ Sbjct: 247 SGIGNDRFARIEGVADREPFAKGDVYDPRNRRMSIIL 283 >gi|301018263|ref|ZP_07182776.1| chemotaxis protein MotB [Escherichia coli MS 69-1] gi|306814281|ref|ZP_07448447.1| flagellar motor protein MotB [Escherichia coli NC101] gi|300399773|gb|EFJ83311.1| chemotaxis protein MotB [Escherichia coli MS 69-1] gi|305852440|gb|EFM52891.1| flagellar motor protein MotB [Escherichia coli NC101] Length = 308 Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 122/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R MF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G++ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|311696900|gb|ADP99773.1| flagellar motor protein MotB [marine bacterium HP15] Length = 307 Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 107/321 (33%), Gaps = 65/321 (20%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 ++ + +W + +AD M++LM FF+++ + D K I Sbjct: 5 PEEEKPGIPAWVVTFADLMSLLMCFFVLLLSFSEIDAQKFKQIAGEL-----------SK 53 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 F Q K I + + + + + ++ S + Sbjct: 54 AFGVQRDVPALEIPKGTSPIFDKFSPAPPEPTVVNEVKQTTTDEAPELQTLKSPTDM--- 110 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + E + + ++ + D+ K + Sbjct: 111 ------------------------------------AVEAAMEEQMQETMDDILKVLEPA 134 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ + + I+I + ++ F S+ E +L + EV+ Sbjct: 135 IAD-------GRINVSEDQRRIVIRVEEK---GSFPSGSAQLTWEFEGLLLDMAEVIEGI 184 Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRL 320 ++I GHTD P R NW LS R+ + VL+ V R+ ++G A + Sbjct: 185 PGDLTIEGHTDNVPIRTDRFYSNWDLSAARSAAVANVLVARDQVEPTRL-SVTGLADTKP 243 Query: 321 KIASDPM--NSANRRIDILVE 339 ++ + + NRR++I+++ Sbjct: 244 RVPNTSAENRAKNRRVEIIID 264 >gi|289662354|ref|ZP_06483935.1| flagellar motor protein MotD [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 324 Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 111/326 (34%), Gaps = 57/326 (17%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q Sbjct: 3 RRRKHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAFGGSSN 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 A+ + + Sbjct: 63 AASPVQLGKTQTLG---------------------------------------------- 76 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 +++ + S+ + TD + +P + + + ++++ + ++ Sbjct: 77 -ADYDRPSVIKAGAPMAASNGPTDPTLLPSMAAQMRMPVSLRNQAQLARAQRQMDAVEQQ 135 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 +S TL+ L+ + + I + I +F S+ L + V Sbjct: 136 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALAGNARATLSTLASV 189 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + GV+ R++ + G+ Sbjct: 190 LRDAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 248 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274 >gi|188993235|ref|YP_001905245.1| flagellar motor protein MotB [Xanthomonas campestris pv. campestris str. B100] gi|167734995|emb|CAP53207.1| motB2 [Xanthomonas campestris pv. campestris] Length = 392 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 76/332 (22%), Positives = 134/332 (40%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +II++ + ++ G+WK+ +ADF+T +MAFFLV+W++ AT + + AI +YF Sbjct: 3 EGKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + S + G +L Sbjct: 63 R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + K D++ K K Sbjct: 95 TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 KRL+ L + + + + +L + T G+ I I+D++N PMFD P T Sbjct: 126 KRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 + +L+++ + ISI GHTD + + + A NW LS DRA +A + L+ G+++ Sbjct: 186 VDILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMADA 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++++ G + L ++P N NRRI I+V Sbjct: 246 KVTRVVGLSSSVLFDKTNPQNPINRRISIVVM 277 >gi|15802301|ref|NP_288326.1| flagellar motor protein MotB [Escherichia coli O157:H7 EDL933] gi|15831853|ref|NP_310626.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. Sakai] gi|16129841|ref|NP_416403.1| protein that enables flagellar motor rotation [Escherichia coli str. K-12 substr. MG1655] gi|89108729|ref|AP_002509.1| protein that enables flagellar motor rotation [Escherichia coli str. K-12 substr. W3110] gi|157158423|ref|YP_001463195.1| flagellar motor protein MotB [Escherichia coli E24377A] gi|157161361|ref|YP_001458679.1| flagellar motor protein MotB [Escherichia coli HS] gi|168757929|ref|ZP_02782936.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4401] gi|168762313|ref|ZP_02787320.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4501] gi|168770876|ref|ZP_02795883.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4486] gi|168776560|ref|ZP_02801567.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4196] gi|168783193|ref|ZP_02808200.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4076] gi|168789758|ref|ZP_02814765.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC869] gi|168801871|ref|ZP_02826878.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC508] gi|170019766|ref|YP_001724720.1| flagellar motor protein MotB [Escherichia coli ATCC 8739] gi|170081544|ref|YP_001730864.1| hypothetical protein ECDH10B_2030 [Escherichia coli str. K-12 substr. DH10B] gi|170684155|ref|YP_001743353.1| flagellar motor protein MotB [Escherichia coli SMS-3-5] gi|188492393|ref|ZP_02999663.1| chemotaxis protein MotB [Escherichia coli 53638] gi|191168098|ref|ZP_03029897.1| chemotaxis protein MotB [Escherichia coli B7A] gi|193065441|ref|ZP_03046510.1| chemotaxis protein MotB [Escherichia coli E22] gi|193069870|ref|ZP_03050819.1| chemotaxis protein MotB [Escherichia coli E110019] gi|194429327|ref|ZP_03061853.1| chemotaxis protein MotB [Escherichia coli B171] gi|194439077|ref|ZP_03071160.1| chemotaxis protein MotB [Escherichia coli 101-1] gi|195939593|ref|ZP_03084975.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. EC4024] gi|208810604|ref|ZP_03252480.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4206] gi|208816679|ref|ZP_03257799.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4045] gi|208819881|ref|ZP_03260201.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4042] gi|209397424|ref|YP_002270973.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4115] gi|217329015|ref|ZP_03445096.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. TW14588] gi|218695455|ref|YP_002403122.1| flagellar motor protein MotB [Escherichia coli 55989] gi|218705389|ref|YP_002412908.1| flagellar motor protein MotB [Escherichia coli UMN026] gi|238901104|ref|YP_002926900.1| protein that enables flagellar motor rotation [Escherichia coli BW2952] gi|253773154|ref|YP_003035985.1| flagellar motor protein MotB [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161949|ref|YP_003045057.1| flagellar motor protein MotB [Escherichia coli B str. REL606] gi|254793513|ref|YP_003078350.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. TW14359] gi|256017907|ref|ZP_05431772.1| flagellar motor protein MotB [Shigella sp. D9] gi|260844299|ref|YP_003222077.1| MotB protein [Escherichia coli O103:H2 str. 12009] gi|260855829|ref|YP_003229720.1| MotB protein [Escherichia coli O26:H11 str. 11368] gi|261227610|ref|ZP_05941891.1| protein that enables flagellar motor rotation [Escherichia coli O157:H7 str. FRIK2000] gi|261258224|ref|ZP_05950757.1| MotB protein [Escherichia coli O157:H7 str. FRIK966] gi|291283071|ref|YP_003499889.1| Chemotaxis protein motB [Escherichia coli O55:H7 str. CB9615] gi|293405381|ref|ZP_06649373.1| motB [Escherichia coli FVEC1412] gi|293446276|ref|ZP_06662698.1| chemotaxis protein MotB [Escherichia coli B088] gi|297517349|ref|ZP_06935735.1| flagellar motor protein MotB [Escherichia coli OP50] gi|298381025|ref|ZP_06990624.1| chemotaxis protein motB [Escherichia coli FVEC1302] gi|300819874|ref|ZP_07100059.1| chemotaxis protein MotB [Escherichia coli MS 107-1] gi|300822336|ref|ZP_07102477.1| chemotaxis protein MotB [Escherichia coli MS 119-7] gi|300899142|ref|ZP_07117423.1| chemotaxis protein MotB [Escherichia coli MS 198-1] gi|300924982|ref|ZP_07140907.1| chemotaxis protein MotB [Escherichia coli MS 182-1] gi|300928923|ref|ZP_07144427.1| chemotaxis protein MotB [Escherichia coli MS 187-1] gi|300956597|ref|ZP_07168876.1| chemotaxis protein MotB [Escherichia coli MS 175-1] gi|301029341|ref|ZP_07192438.1| chemotaxis protein MotB [Escherichia coli MS 196-1] gi|301327680|ref|ZP_07220887.1| chemotaxis protein MotB [Escherichia coli MS 78-1] gi|301645593|ref|ZP_07245522.1| chemotaxis protein MotB [Escherichia coli MS 146-1] gi|307138554|ref|ZP_07497910.1| flagellar motor protein MotB [Escherichia coli H736] gi|307314199|ref|ZP_07593809.1| OmpA/MotB domain protein [Escherichia coli W] gi|309796000|ref|ZP_07690413.1| chemotaxis protein MotB [Escherichia coli MS 145-7] gi|312969933|ref|ZP_07784116.1| chemotaxis protein motB [Escherichia coli 1827-70] gi|331642507|ref|ZP_08343642.1| chemotaxis protein MotB [Escherichia coli H736] gi|331653299|ref|ZP_08354304.1| chemotaxis protein MotB [Escherichia coli M718] gi|331668586|ref|ZP_08369434.1| chemotaxis protein MotB [Escherichia coli TA271] gi|331677774|ref|ZP_08378449.1| chemotaxis protein MotB [Escherichia coli H591] gi|332278938|ref|ZP_08391351.1| flagellar motor rotation protein [Shigella sp. D9] gi|84028148|sp|P0AF07|MOTB_ECO57 RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein MotB gi|84028149|sp|P0AF06|MOTB_ECOLI RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein MotB gi|12515953|gb|AAG56879.1|AE005411_3 enables flagellar motor rotation, linking torque machinery to cell wall [Escherichia coli O157:H7 str. EDL933] gi|146883|gb|AAA24178.1| chemotaxis protein MotB [Escherichia coli] gi|1736548|dbj|BAA15710.1| protein that enables flagellar motor rotation [Escherichia coli str. K12 substr. W3110] gi|1788198|gb|AAC74959.1| protein that enables flagellar motor rotation [Escherichia coli str. K-12 substr. MG1655] gi|13362067|dbj|BAB36022.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. Sakai] gi|157067041|gb|ABV06296.1| chemotaxis protein MotB [Escherichia coli HS] gi|157080453|gb|ABV20161.1| chemotaxis protein MotB [Escherichia coli E24377A] gi|169754694|gb|ACA77393.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739] gi|169889379|gb|ACB03086.1| MotB [Escherichia coli str. K-12 substr. DH10B] gi|170521873|gb|ACB20051.1| chemotaxis protein MotB [Escherichia coli SMS-3-5] gi|187768100|gb|EDU31944.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4196] gi|188487592|gb|EDU62695.1| chemotaxis protein MotB [Escherichia coli 53638] gi|188999462|gb|EDU68448.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4076] gi|189355159|gb|EDU73578.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4401] gi|189360307|gb|EDU78726.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4486] gi|189367322|gb|EDU85738.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4501] gi|189370705|gb|EDU89121.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC869] gi|189376024|gb|EDU94440.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC508] gi|190901896|gb|EDV61646.1| chemotaxis protein MotB [Escherichia coli B7A] gi|192926846|gb|EDV81471.1| chemotaxis protein MotB [Escherichia coli E22] gi|192956770|gb|EDV87224.1| chemotaxis protein MotB [Escherichia coli E110019] gi|194412634|gb|EDX28930.1| chemotaxis protein MotB [Escherichia coli B171] gi|194422036|gb|EDX38040.1| chemotaxis protein MotB [Escherichia coli 101-1] gi|208725120|gb|EDZ74827.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4206] gi|208731022|gb|EDZ79711.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4045] gi|208740004|gb|EDZ87686.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4042] gi|209158824|gb|ACI36257.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4115] gi|209767220|gb|ACI81922.1| chemotaxis protein MotB [Escherichia coli] gi|209767222|gb|ACI81923.1| chemotaxis protein MotB [Escherichia coli] gi|209767224|gb|ACI81924.1| chemotaxis protein MotB [Escherichia coli] gi|209767226|gb|ACI81925.1| chemotaxis protein MotB [Escherichia coli] gi|217318362|gb|EEC26789.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. TW14588] gi|218352187|emb|CAU97928.1| protein that enables flagellar motor rotation [Escherichia coli 55989] gi|218432486|emb|CAR13379.1| protein that enables flagellar motor rotation [Escherichia coli UMN026] gi|238863319|gb|ACR65317.1| protein that enables flagellar motor rotation [Escherichia coli BW2952] gi|242377610|emb|CAQ32366.1| MotB protein, enables flagellar motor rotation, linking torque machinery to cell wall, subunit of Flagellar Motor Complex and Flagellum [Escherichia coli BL21(DE3)] gi|253324198|gb|ACT28800.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973850|gb|ACT39521.1| flagellar motor protein MotB [Escherichia coli B str. REL606] gi|253978044|gb|ACT43714.1| flagellar motor protein MotB [Escherichia coli BL21(DE3)] gi|254592913|gb|ACT72274.1| protein that enables flagellar motor rotation [Escherichia coli O157:H7 str. TW14359] gi|257754478|dbj|BAI25980.1| MotB protein [Escherichia coli O26:H11 str. 11368] gi|257759446|dbj|BAI30943.1| MotB protein [Escherichia coli O103:H2 str. 12009] gi|260448988|gb|ACX39410.1| OmpA/MotB domain protein [Escherichia coli DH1] gi|290762944|gb|ADD56905.1| Chemotaxis protein motB [Escherichia coli O55:H7 str. CB9615] gi|291323106|gb|EFE62534.1| chemotaxis protein MotB [Escherichia coli B088] gi|291427589|gb|EFF00616.1| motB [Escherichia coli FVEC1412] gi|298278467|gb|EFI19981.1| chemotaxis protein motB [Escherichia coli FVEC1302] gi|299877767|gb|EFI85978.1| chemotaxis protein MotB [Escherichia coli MS 196-1] gi|300316579|gb|EFJ66363.1| chemotaxis protein MotB [Escherichia coli MS 175-1] gi|300357232|gb|EFJ73102.1| chemotaxis protein MotB [Escherichia coli MS 198-1] gi|300418857|gb|EFK02168.1| chemotaxis protein MotB [Escherichia coli MS 182-1] gi|300463077|gb|EFK26570.1| chemotaxis protein MotB [Escherichia coli MS 187-1] gi|300525219|gb|EFK46288.1| chemotaxis protein MotB [Escherichia coli MS 119-7] gi|300527571|gb|EFK48633.1| chemotaxis protein MotB [Escherichia coli MS 107-1] gi|300845775|gb|EFK73535.1| chemotaxis protein MotB [Escherichia coli MS 78-1] gi|301076125|gb|EFK90931.1| chemotaxis protein MotB [Escherichia coli MS 146-1] gi|306906168|gb|EFN36686.1| OmpA/MotB domain protein [Escherichia coli W] gi|308120450|gb|EFO57712.1| chemotaxis protein MotB [Escherichia coli MS 145-7] gi|309702112|emb|CBJ01427.1| chemotaxis protein MotB (motility protein B) [Escherichia coli ETEC H10407] gi|310338218|gb|EFQ03307.1| chemotaxis protein motB [Escherichia coli 1827-70] gi|315061195|gb|ADT75522.1| protein that enables flagellar motor rotation [Escherichia coli W] gi|315136532|dbj|BAJ43691.1| chemotaxis protein motB [Escherichia coli DH1] gi|320188589|gb|EFW63251.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7 str. EC1212] gi|320198585|gb|EFW73185.1| Flagellar motor rotation protein MotB [Escherichia coli EC4100B] gi|320641743|gb|EFX11131.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. G5101] gi|320657987|gb|EFX25749.1| flagellar motor protein MotB [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658560|gb|EFX26254.1| flagellar motor protein MotB [Escherichia coli O55:H7 str. USDA 5905] gi|320668458|gb|EFX35285.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. LSU-61] gi|323152620|gb|EFZ38896.1| chemotaxis protein motB [Escherichia coli EPECa14] gi|323174594|gb|EFZ60215.1| chemotaxis protein motB [Escherichia coli LT-68] gi|323186334|gb|EFZ71684.1| chemotaxis protein motB [Escherichia coli 1357] gi|323378228|gb|ADX50496.1| OmpA/MotB domain protein [Escherichia coli KO11] gi|323937148|gb|EGB33428.1| OmpA family protein [Escherichia coli E1520] gi|323940442|gb|EGB36633.1| OmpA family protein [Escherichia coli E482] gi|323961944|gb|EGB57543.1| OmpA family protein [Escherichia coli H489] gi|323972601|gb|EGB67804.1| OmpA family protein [Escherichia coli TA007] gi|324118949|gb|EGC12838.1| OmpA family protein [Escherichia coli E1167] gi|326342267|gb|EGD66048.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7 str. 1044] gi|326343818|gb|EGD67580.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7 str. 1125] gi|331039305|gb|EGI11525.1| chemotaxis protein MotB [Escherichia coli H736] gi|331049397|gb|EGI21469.1| chemotaxis protein MotB [Escherichia coli M718] gi|331063780|gb|EGI35691.1| chemotaxis protein MotB [Escherichia coli TA271] gi|331074234|gb|EGI45554.1| chemotaxis protein MotB [Escherichia coli H591] gi|332089624|gb|EGI94726.1| chemotaxis protein motB [Shigella boydii 5216-82] gi|332101290|gb|EGJ04636.1| flagellar motor rotation protein [Shigella sp. D9] gi|332343616|gb|AEE56950.1| chemotaxis protein MotB [Escherichia coli UMNK88] Length = 308 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 120/336 (35%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R F S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|331673414|ref|ZP_08374182.1| chemotaxis protein MotB [Escherichia coli TA280] gi|331069612|gb|EGI40999.1| chemotaxis protein MotB [Escherichia coli TA280] Length = 308 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 120/336 (35%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R F S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|307726280|ref|YP_003909493.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003] gi|307586805|gb|ADN60202.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003] Length = 330 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 75/343 (21%), Positives = 125/343 (36%), Gaps = 63/343 (18%) Query: 2 NSHGDKNQENDQFIIIKK-KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 + + + II+++ K D ++ G+WKI YADF+T +MAFFL+MW++ Sbjct: 6 SRGSQEQEAPPPPIIVRRSKKGDDHGGHHGGAWKIAYADFVTAMMAFFLLMWLL------ 59 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 S +K D E + +G + Sbjct: 60 --------------------------------GSTSKFDKQGIEDYFNTPLSSLLGGSQG 87 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 S + + S+ K T +E + + P Sbjct: 88 T--------------ASARPNVIEGGGRDISDTRPGDGKKTQIEPATPVNVVPTVAPADA 133 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 ++ +K K +S + T G+ I I+D +N PMF Sbjct: 134 ARLQQLKE--------KLVSLIEQSPALKAFKDQIRISITNEGLRIEIVDSQNRPMFASG 185 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298 S + +L +IG L ISI GHTDA P+ NW LS +RA +A + Sbjct: 186 SPRLQTYAVAILTQIGAALNDVENRISIAGHTDAVPYTGGPVGYSNWELSSERANAARRA 245 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 L+ G+ +++ ++ G A ++ NRRI ILV ++ Sbjct: 246 LVAGGMHGEKLLQVRGLADVLPLNSNVVDEPTNRRISILVMNK 288 >gi|91223190|ref|ZP_01258456.1| chemotaxis LafU protein [Vibrio alginolyticus 12G01] gi|269967120|ref|ZP_06181187.1| chemotaxis LafU protein [Vibrio alginolyticus 40B] gi|91192003|gb|EAS78266.1| chemotaxis LafU protein [Vibrio alginolyticus 12G01] gi|269828257|gb|EEZ82524.1| chemotaxis LafU protein [Vibrio alginolyticus 40B] Length = 331 Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 73/332 (21%), Positives = 123/332 (37%), Gaps = 61/332 (18%) Query: 11 NDQFIIIKKKVA-IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + ++ K+ D ++ G+WK+ +ADFM LMA FLV+W++ D + +KAI + Sbjct: 3 KQEHVVFKRAKVYSHDESSHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHL 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + + Q S + IDL+ D + + S+ K Sbjct: 63 HSSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSYFKGDGD---- 112 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 P + + Sbjct: 113 ---------------------------------------------GPEIDSLIPGNFDTQ 127 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 ++L LAK I + + N V T G+ I + D MF + + P Sbjct: 128 EQLAALAKVIEQMTAQI---NAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFE 184 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + V + I GHTDA PF+ + NW LS RA A L++ G+ +D Sbjct: 185 DLLLALAPVFHRVNNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARNTLVEGGMPDD 244 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 R+ +++G + L +P +S NRRI++ V Sbjct: 245 RVMQVTGMSDRALLNPDEPDSSENRRIELFVL 276 >gi|24113274|ref|NP_707784.1| flagellar motor protein MotB [Shigella flexneri 2a str. 301] gi|30063341|ref|NP_837512.1| flagellar motor protein MotB [Shigella flexneri 2a str. 2457T] gi|110805869|ref|YP_689389.1| flagellar motor protein MotB [Shigella flexneri 5 str. 8401] gi|24052278|gb|AAN43491.1| chemotaxis protein MotB [Shigella flexneri 2a str. 301] gi|30041593|gb|AAP17321.1| chemotaxis protein MotB [Shigella flexneri 2a str. 2457T] gi|110615417|gb|ABF04084.1| flagellar motor protein [Shigella flexneri 5 str. 8401] gi|281601336|gb|ADA74320.1| Chemotaxis protein MotB [Shigella flexneri 2002017] gi|332757207|gb|EGJ87544.1| chemotaxis protein motB [Shigella flexneri 2747-71] gi|332757449|gb|EGJ87784.1| chemotaxis protein motB [Shigella flexneri K-671] gi|332766620|gb|EGJ96824.1| motB protein, enables flagellar motor rotation, linking torque machinery to cell wall [Shigella flexneri 2930-71] gi|333004150|gb|EGK23682.1| chemotaxis protein motB [Shigella flexneri K-272] gi|333017634|gb|EGK36946.1| chemotaxis protein motB [Shigella flexneri K-304] Length = 308 Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 120/336 (35%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R F S+ P Sbjct: 129 DPKLRALRLHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|289665512|ref|ZP_06487093.1| flagellar motor protein MotB [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668313|ref|ZP_06489388.1| flagellar motor protein MotB [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 385 Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 80/332 (24%), Positives = 142/332 (42%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +II++ + ++ G+WK+ +ADF+T +MAFFLV+W++ AT + + AI +YF Sbjct: 3 EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 P ++ ++ +K+G T + Q+ E Sbjct: 63 RNP----------------SPLSGKSPAPSPGMNGPGGASTSMIKLGGTADMAKGQKDEM 106 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + +E ++ K K Sbjct: 107 GRKRDNAADTTEDSRS-----------------------------------------KDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 KRL+ L + + + + +L + T G+ I I+D++N PMFD P T Sbjct: 126 KRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 + +L+++ + ISI GHTD + + + A NW LS DRA +A + L+ G+S+ Sbjct: 186 VAILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMSDA 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++++ G + L DP N NRRI I+V Sbjct: 246 KVTRVVGLSSSVLFDKIDPQNPINRRISIVVM 277 >gi|21233083|ref|NP_639000.1| flagellar motor protein MotB [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770023|ref|YP_244785.1| flagellar motor protein MotB [Xanthomonas campestris pv. campestris str. 8004] gi|21114936|gb|AAM42924.1| chemotaxis MotB protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575355|gb|AAY50765.1| chemotaxis MotB protein [Xanthomonas campestris pv. campestris str. 8004] Length = 393 Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 76/332 (22%), Positives = 134/332 (40%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +II++ + ++ G+WK+ +ADF+T +MAFFLV+W++ AT + + AI +YF Sbjct: 3 EGKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + S + G +L Sbjct: 63 R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + K D++ K K Sbjct: 95 TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 KRL+ L + + + + +L + T G+ I I+D++N PMFD P T Sbjct: 126 KRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 + +L+++ + ISI GHTD + + + A NW LS DRA +A + L+ G+++ Sbjct: 186 VDILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMADA 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++++ G + L ++P N NRRI I+V Sbjct: 246 KVTRVVGLSSSVLFDKTNPQNPINRRISIVVM 277 >gi|323977926|gb|EGB73012.1| OmpA family protein [Escherichia coli TW10509] Length = 308 Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 120/336 (35%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R F S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDG 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|34497482|ref|NP_901697.1| flagellar motor protein MotB [Chromobacterium violaceum ATCC 12472] gi|34103337|gb|AAQ59699.1| chemotaxis motB protein [Chromobacterium violaceum ATCC 12472] Length = 306 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 82/335 (24%), Positives = 137/335 (40%), Gaps = 70/335 (20%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 E+ + I++K K+ ++ G+WKI YADF+T +MAFFL+MW++ + T I +Y Sbjct: 3 DESQRPIVVK-KIKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLGSASQGTLNGISEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K ++ G D + + + + Sbjct: 62 FKTPLKVALSGGAGAGDATSVIKGGGNDITKQAGQ------------------------- 96 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + E ++E L L ++ + + Sbjct: 97 --------------------------VNKAGAKQEEVMQKQKEQARLNQLQQKIQQTIDQ 130 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + ++ ++ G+ I I+D++N PMFD SS LP T Sbjct: 131 SELFKQYKNQLKLEMTPE----------------GLKIQIVDEQNRPMFDSGSSRMLPHT 174 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 V+LQ++ L ISI GHTDA PF NW LS DRA +A + L+ G++E Sbjct: 175 RVLLQQLAPELNQLPNRISISGHTDAKPFGGGQGGYSNWELSADRANTARRELVAGGLTE 234 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++I ++ G A I SD + NRRI I+V ++ Sbjct: 235 NKILRVVGLASANPLIKSDVFSPENRRITIVVLNK 269 >gi|325915929|ref|ZP_08178225.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937] gi|325537896|gb|EGD09596.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937] Length = 396 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 75/332 (22%), Positives = 133/332 (40%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +II++ + ++ G+WK+ +ADF+T +MAFFLV+W++ AT + + AI +YF Sbjct: 3 EGKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + S + G +L Sbjct: 63 R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + K D++ K K Sbjct: 95 TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L + + + + +L + T G+ I I+D++N PMFD P T Sbjct: 126 RRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 + +L+++ + ISI GHTD + + + A NW LS DRA +A + L+ G+ + Sbjct: 186 VDILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVGGGMEDA 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++++ G + L ++P N NRRI I+V Sbjct: 246 KVTRVVGLSSSVLFDKTNPQNPINRRISIVVM 277 >gi|254523338|ref|ZP_05135393.1| MotB protein [Stenotrophomonas sp. SKA14] gi|219720929|gb|EED39454.1| MotB protein [Stenotrophomonas sp. SKA14] Length = 338 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 55/325 (16%), Positives = 113/325 (34%), Gaps = 55/325 (16%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N +W I YAD MT+L+AFF+VM+ I++ ++ + + Sbjct: 3 RRKHHEEHANHEAWAIPYADLMTLLLAFFVVMYAISSVNEGKYRIMADAL---------- 52 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 D T N V + ++ + + + Sbjct: 53 ------------------TDAFGGAPRTINPVQVGNKQVQGGG-----WDSPSVIKSGTK 89 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + D + + S++ +E + +++L +A ++ Sbjct: 90 IGPSAPAPSHDPTLLPSMASQMRMPVSVHNQEQIA------------RAERQLNSIADRL 137 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 ++ L+ L+ + + T I + I +F S+ L + +VL Sbjct: 138 TAALAPLIDRGM---ISVRRTELWIEVEINSD---ILFPTGSAALDVHARQTLASLADVL 191 Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + GHTD P NW LS RA S + GV R++ + G+ Sbjct: 192 RDVPNSVRVEGHTDNVPIATATFPSNWELSAGRAASVVHLFADQGVQPSRLAMV-GYGQF 250 Query: 319 RLKIASDPM--NSANRRIDILVEDR 341 R + +D + NRR+ +++ Sbjct: 251 RPREENDSAQGRNRNRRVMVIILAD 275 >gi|66043829|ref|YP_233670.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae B728a] gi|63254536|gb|AAY35632.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] gi|330971543|gb|EGH71609.1| flagellar motor protein MotB [Pseudomonas syringae pv. aceris str. M302273PT] Length = 349 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 76/335 (22%), Positives = 129/335 (38%), Gaps = 65/335 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W++++ + A Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLA----- 55 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + P S + ID + + + + Sbjct: 56 -------------VAGYFKDPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVQTTPSPDTV 102 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + E + Sbjct: 103 PL--------------------------------------------EAENAETKAEAVEQ 118 Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 119 ERLEMLLQELQTKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYF 178 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + + + +SI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 179 EDILLALADTIKSVPNKVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDS 238 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 239 QVARVVGYASSALYDRQNPTNPINRRIDIVVLTKK 273 >gi|167035946|ref|YP_001671177.1| flagellar motor protein MotB [Pseudomonas putida GB-1] gi|166862434|gb|ABZ00842.1| OmpA/MotB domain protein [Pseudomonas putida GB-1] Length = 350 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 86/334 (25%), Positives = 135/334 (40%), Gaps = 62/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q II+K+ ++ G+WKI +ADF T +MAFFLV+W+++ + K AI YF Sbjct: 2 ENNQPIIVKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 D E + IDL + Sbjct: 61 K--------------DPIGFSESGTPYVIDLGGSPELAP--------------------- 85 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + +++ +E + E L L +E ++ Sbjct: 86 ---------EKTINPEVKAEPTQESTTQLSKDQVETMAEQVERERLELLLQELQNKVEEN 136 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +LQ +I LFE T+ G+ I I+D N PMFD S+ P Sbjct: 137 PQLQKFKDQI----------------LFEITQDGLRIQIMDAENRPMFDIGSARLQPYFE 180 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + ISI GHTDA P+ NW LS +RA +A + L+ G + + Sbjct: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGEFGNWELSANRANAARRALVAGGYPDGQ 240 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ G+A L DP N NRRIDI+V ++ Sbjct: 241 VARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKK 274 >gi|190574215|ref|YP_001972060.1| flagellar motor protein MotD [Stenotrophomonas maltophilia K279a] gi|190012137|emb|CAQ45760.1| putative chemotaxis protein MotB [Stenotrophomonas maltophilia K279a] Length = 338 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 113/325 (34%), Gaps = 55/325 (16%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N +W I YAD MT+L+AFF+VM+ I++ ++ + + Sbjct: 3 RRKHHEEHANHEAWAIPYADLMTLLLAFFVVMYAISSVNEGKYRIMADAL---------- 52 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 D T N V + ++ + + + Sbjct: 53 ------------------TDAFGGAPRTINPVQVGNKQVQGGG-----WDSPSVIKSGTK 89 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + D + + S++ +E + +++L +A ++ Sbjct: 90 IGPSAPAPSHDPTLLPSMASQMRMPVSVHNQEQIA------------RAERQLNSIADRL 137 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 ++ L+ L+ + + T I + I +F S+ L + EVL Sbjct: 138 TAALAPLIDRGM---ISVRRTELWIEVEINSD---ILFPTGSAALDVHARQTLASLAEVL 191 Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + GHTD P NW LS RA S + GV R++ + G+ Sbjct: 192 RDVPNSVRVEGHTDNVPIATATFPSNWELSAGRAASVVHLFADQGVQPSRLAMV-GYGQF 250 Query: 319 RLKIASDPM--NSANRRIDILVEDR 341 R + +D + NRR+ +++ Sbjct: 251 RPREENDSAQGRNRNRRVMVIILAD 275 >gi|170692674|ref|ZP_02883836.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] gi|170142330|gb|EDT10496.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] Length = 328 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 127/343 (37%), Gaps = 64/343 (18%) Query: 2 NSHGDKNQENDQFIIIKK-KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 S G +++ II+++ K D ++ G+WKI YADF+T +MAFFL+MW++ Sbjct: 5 RSRGSEDEA-PPPIIVRRSKKGDDHGGHHGGAWKIAYADFVTAMMAFFLLMWLL------ 57 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 S +K D E + +G + Sbjct: 58 --------------------------------GSTSKFDKQGIEDYFNTPLSSLLGGSEG 85 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + + + S+ K T +E + + P Sbjct: 86 T--------------AAARPSVVQGGGRDISDTRPGDGKKTQIEAATPVNVVPTVAPADA 131 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 ++ +K K IS + T G+ I I+D +N PMF Sbjct: 132 ARLQQLKE--------KLISLIEQSPTLKAFKDQIRISITNEGLRIEIVDSQNRPMFASG 183 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298 S + +L +IG L ISI GHTDA P+ NW LS +RA +A + Sbjct: 184 SPRLQTYAVAILTQIGAALNDVENRISIAGHTDAVPYTGGPVGYSNWELSSERANAARRA 243 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 L+ G+ +++ ++ G A ++ NRRI ILV ++ Sbjct: 244 LVSGGMHGEKLLQVRGLADVLPLNSNVVDEPTNRRISILVMNK 286 >gi|283834436|ref|ZP_06354177.1| MbhA protein [Citrobacter youngae ATCC 29220] gi|291069983|gb|EFE08092.1| MbhA protein [Citrobacter youngae ATCC 29220] Length = 332 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 137/339 (40%), Gaps = 52/339 (15%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M ++ + II++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKGPNRRDRGAKTTIIRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKA 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 ++ I + Q+ ++ + I Sbjct: 61 DRENIVAALH---------------GQSIFNGGGMAPLNKLGKQPIAPG----------- 94 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + + L K+ + +++ E L Sbjct: 95 --------------------------AQKKNVTRNKLDKTVNPQETARITEENAKKALDV 128 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + A+ ++K Q+L + + ++ + E G+ + I D +N MF++ Sbjct: 129 NEKTALLKQKSAQELGELATDINVIARKAHMETNLEMEIVPQGLRVLIKDDQNRNMFERG 188 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 S+ +P +L ++ V I I GHTDA +++ +NW LS DRA SA +VL Sbjct: 189 SAKIMPFFKSLLVELAPVFDSLDNKIIITGHTDAMSYKSNIYNNWNLSGDRALSARRVLE 248 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +G+ +D++ ++S A L A +P ++ NRRI+I+V Sbjct: 249 DAGMPQDKVMQVSAMADQMLLDAKNPESAGNRRIEIMVL 287 >gi|296135687|ref|YP_003642929.1| OmpA/MotB domain protein [Thiomonas intermedia K12] gi|295795809|gb|ADG30599.1| OmpA/MotB domain protein [Thiomonas intermedia K12] Length = 298 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 107/325 (32%), Gaps = 76/325 (23%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + ADF+T+L AFF+VM+ I++ ++ K + Q Sbjct: 3 RKKAHEEHENHERWLVSDADFITLLFAFFVVMYSISSLNEGKYKVLSQ------------ 50 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 I + T N V + + + Sbjct: 51 ----------------TMIAAFTGQPTTPNPVQVGQPFNSMPSAIDLPPIPKQQKPEIIE 94 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 A + +K LQ +A+KI Sbjct: 95 PGRGGPG--------------------------------------AKEVQKTLQGVAEKI 116 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L+ + V T G++I I D +F + P+ +L +I VL Sbjct: 117 QTLLASAIRKG---DVRVRMTPLGVVIDIHDT---VLFASGQAALTPQAQDLLNQIAGVL 170 Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I + G TD +P NW LS RA S ++ ++ GV +++ G+ + Sbjct: 171 QGVAYPIQVNGFTDTTPIHTAQFPSNWALSAARAVSVVEMFIEQGVKPEQLVAA-GYGQY 229 Query: 319 RLKIASDPM--NSANRRIDILVEDR 341 ++D +ANRR+ +++ Sbjct: 230 HPVESNDTAKGRAANRRVSVVIVSP 254 >gi|56551498|ref|YP_162337.1| OmpA/MotB domain-containing protein [Zymomonas mobilis subsp. mobilis ZM4] gi|56543072|gb|AAV89226.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 326 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 74/340 (21%), Positives = 133/340 (39%), Gaps = 59/340 (17%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M +KN+ + II+KK + ++ G+WK+ YADF+T +MAFFL++W++ AT++ Sbjct: 1 MARKSNKNEPEIRPIIVKKIIDEGHGGHHGGAWKVAYADFVTAMMAFFLLLWLLGATNEK 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 + KGI D NP L S+ Sbjct: 61 ER------------------KGIADYFNP----------------------SLTPESSAG 80 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + H K + K+ Sbjct: 81 SDGGMGFLKGDSITAPQDMPTHSKLAPNGQKLVAKNPDVIAQ-----------------A 123 Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++I+ ++R + L + + + + + V TR G+ I ++DQ + MF Sbjct: 124 KEIIKQNDRQRFEKLREMLEEHMKKDPSLARLQQSVRLVETREGLRIDLVDQSDFAMFTL 183 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV 298 + +P ++ ++ V+ +I +RGHTDA P+ + +NW LS RA + + Sbjct: 184 GTENMVPAAQKLIAEVARVIKDVPNMIIVRGHTDALPYASGQNVNNWTLSAARADATRRG 243 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 L+ GV +R +I G A + + M+ NRR+ I + Sbjct: 244 LIAGGVDINRFDRIEGVADREPYVPENRMDPRNRRMSITL 283 >gi|308050006|ref|YP_003913572.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] gi|307632196|gb|ADN76498.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] Length = 328 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 65/331 (19%), Positives = 123/331 (37%), Gaps = 44/331 (13%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 + ++++ + G+WK+ +ADF +MA FLV+W++ D + +I Q Sbjct: 4 HEVVVVRSRSLGGKRAKAGGAWKVAFADFTLAMMALFLVLWLVQVADKQERASIVQAL-- 61 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + + + + S L +D ++ + T ++ + N I Sbjct: 62 -------TGETLLESSSGGSWDSNRPHILELDGTLSMTEAVMPATGTGVQRAGPAMVNQI 114 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + L+ ++ + + Sbjct: 115 PKGERGASAGQG--------------------------------DTLTSLLPGPVETQAQ 142 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L+ LA++ ++ V + G+ I I D MF + SS P + Sbjct: 143 LEVLAREAGKIIAQSEI---ADNVAIQVVPQGLKILIRDNLQQFMFARGSSRMTPYFEDL 199 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 L + +L + + GHTD++ FR+ NW LS +RA A + L GV ++ Sbjct: 200 LFSLAPLLKQVQNPLMVSGHTDSTHFRSNDSSNWELSSERALEARRALEFGGVGRNQFFN 259 Query: 312 ISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + G A SDP +SANRRI+++V + Sbjct: 260 VVGMADQVPVEPSDPRSSANRRIELMVLTHK 290 >gi|91211113|ref|YP_541099.1| flagellar motor protein MotB [Escherichia coli UTI89] gi|110642005|ref|YP_669735.1| flagellar motor protein MotB [Escherichia coli 536] gi|117624039|ref|YP_852952.1| flagellar motor protein MotB [Escherichia coli APEC O1] gi|191172996|ref|ZP_03034530.1| chemotaxis protein MotB [Escherichia coli F11] gi|215487100|ref|YP_002329531.1| flagellar motor protein MotB [Escherichia coli O127:H6 str. E2348/69] gi|218558752|ref|YP_002391665.1| flagellar motor protein MotB [Escherichia coli S88] gi|218689885|ref|YP_002398097.1| flagellar motor protein MotB [Escherichia coli ED1a] gi|237705847|ref|ZP_04536328.1| flagellar motor protein MotB [Escherichia sp. 3_2_53FAA] gi|300935867|ref|ZP_07150825.1| chemotaxis protein MotB [Escherichia coli MS 21-1] gi|300982219|ref|ZP_07175931.1| chemotaxis protein MotB [Escherichia coli MS 200-1] gi|312967092|ref|ZP_07781310.1| chemotaxis protein motB [Escherichia coli 2362-75] gi|331657937|ref|ZP_08358899.1| chemotaxis protein MotB [Escherichia coli TA206] gi|91072687|gb|ABE07568.1| chemotaxis MotB protein [Escherichia coli UTI89] gi|110343597|gb|ABG69834.1| chemotaxis MotB protein [Escherichia coli 536] gi|115513163|gb|ABJ01238.1| chemotaxis MotB protein [Escherichia coli APEC O1] gi|190906707|gb|EDV66312.1| chemotaxis protein MotB [Escherichia coli F11] gi|215265172|emb|CAS09560.1| protein that enables flagellar motor rotation [Escherichia coli O127:H6 str. E2348/69] gi|218365521|emb|CAR03248.1| protein that enables flagellar motor rotation [Escherichia coli S88] gi|218427449|emb|CAV17777.1| protein that enables flagellar motor rotation [Escherichia coli ED1a] gi|222033636|emb|CAP76377.1| chemotaxis protein motB [Escherichia coli LF82] gi|226900604|gb|EEH86863.1| flagellar motor protein MotB [Escherichia sp. 3_2_53FAA] gi|300307289|gb|EFJ61809.1| chemotaxis protein MotB [Escherichia coli MS 200-1] gi|300458979|gb|EFK22472.1| chemotaxis protein MotB [Escherichia coli MS 21-1] gi|307626628|gb|ADN70932.1| flagellar motor protein MotB [Escherichia coli UM146] gi|312288556|gb|EFR16458.1| chemotaxis protein motB [Escherichia coli 2362-75] gi|312946487|gb|ADR27314.1| flagellar motor protein MotB [Escherichia coli O83:H1 str. NRG 857C] gi|315286597|gb|EFU46030.1| chemotaxis protein MotB [Escherichia coli MS 110-3] gi|315296507|gb|EFU55804.1| chemotaxis protein MotB [Escherichia coli MS 16-3] gi|320194396|gb|EFW69027.1| Flagellar motor rotation protein MotB [Escherichia coli WV_060327] gi|323186771|gb|EFZ72091.1| chemotaxis protein motB [Escherichia coli RN587/1] gi|323952390|gb|EGB48263.1| OmpA family protein [Escherichia coli H252] gi|323956291|gb|EGB52034.1| OmpA family protein [Escherichia coli H263] gi|324007255|gb|EGB76474.1| chemotaxis protein MotB [Escherichia coli MS 57-2] gi|324013535|gb|EGB82754.1| chemotaxis protein MotB [Escherichia coli MS 60-1] gi|331056185|gb|EGI28194.1| chemotaxis protein MotB [Escherichia coli TA206] Length = 308 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 121/335 (36%), Gaps = 71/335 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R MF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G++ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ ++ G A P ++ NRRI +LV ++ Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNK 267 >gi|312958642|ref|ZP_07773162.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6] gi|311287185|gb|EFQ65746.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6] Length = 339 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 83/334 (24%), Positives = 128/334 (38%), Gaps = 63/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W+++ + K AI YF Sbjct: 2 ENNQPIIIKRVKRFA-AGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 D E + IDL + T ++ +E Sbjct: 61 K--------------DPIGFSESGTPFVIDLGGSPELAPERTINPEVKTEAPQEKIPIER 106 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + Q + L ++ + Sbjct: 107 DTVETMAEQVEQERLELLLQELQ------------------------------------- 129 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + FE T G+ I I D N PMFD S+ P Sbjct: 130 ----------NKVEENPQMMKFKDQISFEITPEGLRIQITDAANRPMFDSGSARLKPYFE 179 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + ISI GHTDA P+ NW LS +RA +A + L+ + + Sbjct: 180 DILLAMADTIKTVPNKISISGHTDAKPYAGQGDFGNWELSANRANAARRALVAGSYPDPQ 239 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ GFA +L DP N ANRRIDI+V ++ Sbjct: 240 VARVVGFASSQLFDHKDPFNPANRRIDIVVLTKK 273 >gi|194365634|ref|YP_002028244.1| flagellar motor protein MotD [Stenotrophomonas maltophilia R551-3] gi|194348438|gb|ACF51561.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3] Length = 338 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 113/325 (34%), Gaps = 55/325 (16%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N +W I YAD MT+L+AFF+VM+ I++ ++ + + Sbjct: 3 RRKHHEEHANHEAWAIPYADLMTLLLAFFVVMYAISSVNEGKYRIMADAL---------- 52 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 D T N V + ++ + + + Sbjct: 53 ------------------TDAFGGAPRTINPVQVGNKQVQGGG-----WDSPSVIKSGTK 89 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + D + + S++ +E + +++L +A ++ Sbjct: 90 VGPSAPAPSHDPTLLPSMASQMRMPVSVHNQEQIA------------RAERQLSSIADRL 137 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 ++ L+ L+ + + T I + I +F S+ L + EVL Sbjct: 138 TAALAPLIDRGM---ISVRRTELWIEVEINSD---ILFPTGSAALDVHARQTLASLAEVL 191 Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + GHTD P NW LS RA S + GV R++ + G+ Sbjct: 192 RDVPNSVRVEGHTDNVPIATATFPSNWELSAGRAASVVHLFADQGVQPSRLAMV-GYGQF 250 Query: 319 RLKIASDPM--NSANRRIDILVEDR 341 R + +D + NRR+ +++ Sbjct: 251 RPREENDSAQGRNRNRRVMVIILAD 275 >gi|26248156|ref|NP_754196.1| flagellar motor protein MotB [Escherichia coli CFT073] gi|227885682|ref|ZP_04003487.1| flagellar motor protein MotB [Escherichia coli 83972] gi|300994031|ref|ZP_07180650.1| chemotaxis protein MotB [Escherichia coli MS 45-1] gi|301050754|ref|ZP_07197612.1| chemotaxis protein MotB [Escherichia coli MS 185-1] gi|26108560|gb|AAN80763.1|AE016762_16 Chemotaxis motB protein [Escherichia coli CFT073] gi|227837255|gb|EEJ47721.1| flagellar motor protein MotB [Escherichia coli 83972] gi|300297571|gb|EFJ53956.1| chemotaxis protein MotB [Escherichia coli MS 185-1] gi|300406399|gb|EFJ89937.1| chemotaxis protein MotB [Escherichia coli MS 45-1] gi|307553906|gb|ADN46681.1| flagellar motor rotation protein [Escherichia coli ABU 83972] gi|315290318|gb|EFU49694.1| chemotaxis protein MotB [Escherichia coli MS 153-1] Length = 308 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 121/335 (36%), Gaps = 71/335 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R MF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G++ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ ++ G A P ++ NRRI +LV ++ Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNK 267 >gi|13446371|gb|AAK20927.1| LafU [Aeromonas hydrophila] Length = 315 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 68/332 (20%), Positives = 131/332 (39%), Gaps = 48/332 (14%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 N + IIIK++ + P G+ K+ +ADF +MAFF+V+WI+ + + ++ + + Sbjct: 3 NHEQIIIKRQQRRNSAPKGGGACKVAFADFTLAMMAFFMVLWILAVSSQEEREVVARRLR 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 ++M + FD +N P +DE K + + Sbjct: 63 D--YSIMDSEANPFDIRNSPYPVDLGGNLSVLDELSPKFVEEGQ---------------- 104 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 +E++ + + + ++ + Sbjct: 105 ---------------------------RMPKHMERNRSIFSDGASGGYENLLVGKIEGEA 137 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +++ LA ++ + + R G+ I I D M+ + S+ P Sbjct: 138 QMKQLAGSLA---RWPIRCKSRTTLSCNWYRKGLRILIRDDDEREMYSRGSARISPFFRH 194 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L + + + I GHTD++PF NW LS DRA A +VL+ G+ +R+ Sbjct: 195 MLMALAPIFQRVENRVMISGHTDSTPFAGDNYSNWELSSDRAMMARRVLLAGGMPPERVG 254 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++ + L+ +DP S NRRI++LV Q Sbjct: 255 QVAAMSDTMLENTADPRGSQNRRIELLVMTSQ 286 >gi|188576036|ref|YP_001912965.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520488|gb|ACD58433.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 286 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 57/326 (17%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N +W I YAD MT+L+AFF+VM+ I++ ++ K + Q T Sbjct: 3 RRRTHHEEHGNHEAWAIPYADLMTLLLAFFVVMYAISSLNEGKYKVMAQALTSAFGGSST 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 A+ + + Sbjct: 63 AASPVQLGKTQTLG---------------------------------------------- 76 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 +++ + S+ + TD + +P + + + ++++ + ++ Sbjct: 77 -ADYDRPSVIKAGAPMAASNGPTDPSLLPSMAAQMRMPVSLRNQTQLARAQRQMDAVEQQ 135 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 +S TL+ L+ + + I + I +F S+ L + V Sbjct: 136 LSKTLAPLIDKKL---ITIRRNDLWIEVEINSD---ILFGTGSAALAGNARTTLSTLASV 189 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G+TD P NW LS RA S + GV+ R++ + G+ Sbjct: 190 LREAPNGVRVEGYTDNQPIATAQFPSNWELSAARAASVVHLFADDGVAPQRLAMV-GYGE 248 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 R + + NRR+ +++ Sbjct: 249 FRARADNSTEAGRNANRRVVLIILAD 274 >gi|294492517|gb|ADE91273.1| chemotaxis protein MotB [Escherichia coli IHE3034] Length = 308 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 121/335 (36%), Gaps = 71/335 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R MF S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G++ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ ++ G A P ++ NRRI +LV ++ Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNK 267 >gi|103488396|ref|YP_617957.1| OmpA/MotB [Sphingopyxis alaskensis RB2256] gi|98978473|gb|ABF54624.1| OmpA/MotB [Sphingopyxis alaskensis RB2256] Length = 287 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 79/327 (24%), Positives = 128/327 (39%), Gaps = 57/327 (17%) Query: 13 QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72 + II+KK + ++ G+WK+ YADF+T +MAFFL+MW++ AT++ +KA+ YF P Sbjct: 10 RPIIVKKVIEAGHGGHHGGAWKVAYADFVTAMMAFFLLMWLLGATNEKQRKALADYFAPT 69 Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 + G S +K + G+ + Sbjct: 70 IVQSKQDTAGSNGLFGGDSLVSVDKY----------PHGAAQTGTRAMTIPRDAVGGPRE 119 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++++E + SL S K + K Sbjct: 120 ASGRAREAESKRFSLLAQSMKDRIQSKGD------------------------------- 148 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + F T G+ I I+D + MF +S P + Sbjct: 149 ---------------LRRLARNLHFTETMEGLRIDIVDDADFSMFALGTSQLTPAGAKLF 193 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++ +A + + IRGHTDA+P+ +NWRLS+DRA L GV+ DR ++ Sbjct: 194 AEVAVPIAEAPNQLMIRGHTDAAPWSAKSGTNNWRLSVDRAEVTRHYLEFRGVASDRFAR 253 Query: 312 ISGFAHHRLKIASDPMNSANRRIDILV 338 I G A I SD + NRRI I + Sbjct: 254 IEGVADREPYIPSDRFDPRNRRISITL 280 >gi|331683396|ref|ZP_08383997.1| chemotaxis protein MotB [Escherichia coli H299] gi|284921808|emb|CBG34881.1| chemotaxis protein MotB (motility protein B) [Escherichia coli 042] gi|331079611|gb|EGI50808.1| chemotaxis protein MotB [Escherichia coli H299] Length = 308 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R F S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G++ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|281178957|dbj|BAI55287.1| chemotaxis protein MotB [Escherichia coli SE15] Length = 308 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKRPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R F S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G++ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|325271245|ref|ZP_08137790.1| flagellar motor protein MotB [Pseudomonas sp. TJI-51] gi|324103648|gb|EGC00950.1| flagellar motor protein MotB [Pseudomonas sp. TJI-51] Length = 340 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 86/334 (25%), Positives = 135/334 (40%), Gaps = 62/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q II+K+ ++ G+WKI +ADF T +MAFFLV+W+++ + K AI YF Sbjct: 2 ENNQPIIVKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 D E + IDL + + Sbjct: 61 Q--------------DPIGFSESGTPYVIDLGGSPEMAPDKTI----------------- 89 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 T ++ +E + E L L +E ++ Sbjct: 90 -------------NPEVKTEPTQPSPTQLDKDQVETMAEQVERERLELLLQELQNKVEEN 136 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +LQ +I LFE T+ G+ I I+D N PMFD S+ P Sbjct: 137 PQLQKFKDQI----------------LFEITQDGLRIQIMDAENRPMFDIGSARLQPYFE 180 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + ISI GHTDA P+ NW LS +RA +A + L+ G + + Sbjct: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGEFGNWELSANRANAARRALVAGGYPDGQ 240 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ G+A L +P N NRRIDI+V ++ Sbjct: 241 VARVVGYASSSLFDRKNPFNPVNRRIDIIVLTKK 274 >gi|330830900|ref|YP_004393852.1| sodium-driven polar flagellar protein [Aeromonas veronii B565] gi|328806036|gb|AEB51235.1| Sodium-driven polar flagellar protein [Aeromonas veronii B565] Length = 283 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 105/313 (33%), Gaps = 47/313 (15%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 +AD M++LM FF+++ D K I F QN E Sbjct: 1 MGTFADLMSLLMCFFVLLLSFAEMDVQKFKQIAGSM-----------DKAFGVQNILEVK 49 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 K I + + T ++ + + +L ++ Sbjct: 50 DIPKGTSVIAQEFRPGRPEPTPIDTVMQQTIDLTQTELEFLPGESDQAGGQDKSDGKQTG 109 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 G A K +++ LAK ++ + + D Sbjct: 110 GDT-------------------------AQDAKKAQEQSNTLAKALAEQMKDQIQDGA-- 142 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 + E I+I I ++ F S+ P+ V++K+ +L I+I GHTD Sbjct: 143 -IEIEALGQQIIIRIREK---ASFPAGSAFLQPQFWPVIRKVATLLKDVPGEITISGHTD 198 Query: 274 ASPFRNI-ARDNWRLSLDRAYSAY-QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 + + NW LS RA + Q+L G + R+ + G A + + + + Sbjct: 199 NVATEDELFQSNWELSSQRAVAVAHQMLKVPGFDQGRLV-VQGMADSQPLVPNTTPENRR 257 Query: 331 -NRRIDILVEDRQ 342 NRR++I + + Sbjct: 258 MNRRVEIAIMQGK 270 >gi|331647484|ref|ZP_08348576.1| chemotaxis protein MotB [Escherichia coli M605] gi|330911699|gb|EGH40209.1| flagellar motor rotation protein MotB [Escherichia coli AA86] gi|331043208|gb|EGI15346.1| chemotaxis protein MotB [Escherichia coli M605] Length = 308 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 121/336 (36%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKRPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDLDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R F S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G++ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNG 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|83648052|ref|YP_436487.1| flagellar motor protein [Hahella chejuensis KCTC 2396] gi|83636095|gb|ABC32062.1| Flagellar motor protein [Hahella chejuensis KCTC 2396] Length = 328 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 84/334 (25%), Positives = 133/334 (39%), Gaps = 67/334 (20%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E II+++ + G+WK+ +ADF T +MAFFLV+W+ A + K AI YF Sbjct: 3 EERPPIIVRRVRKGHH--AHGGAWKVAFADFATAMMAFFLVLWLSEAATKEQKDAISGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 S + D +T G + + + E+ Sbjct: 61 TDPVGFEQGGSPYVIDLGGS----------------VTVTVTQDTAGKPQDQPEVRMRED 104 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 I L+ + E L L +E + +++ Sbjct: 105 TIQDLAA--------------------------------QLEQQKLTQLMQEIMAQIEKN 132 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +L ++ L + T G+ I I+D+R PMFD S P Sbjct: 133 PKLNAFKDQL----------------LLDITDEGLRIQIVDKRQRPMFDSGRSELQPYFE 176 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L ++ + +A IS+ GHTDA PF NW LS DRA +A + L++ G+ E R Sbjct: 177 EILFELAKSIAKVRNKISVSGHTDAQPFLGRDNYSNWELSADRANAARRALVEGGLPEGR 236 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ G A L DP N NRRI ILV +++ Sbjct: 237 MARVVGLASSVLFDEKDPYNPVNRRISILVLNKK 270 >gi|302877353|ref|YP_003845917.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans ES-2] gi|302580142|gb|ADL54153.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2] Length = 295 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 78/314 (24%), Positives = 137/314 (43%), Gaps = 59/314 (18%) Query: 31 GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90 G+WKI YADF+T LMAFFL++W+I++T D ++AI +YF + + + Sbjct: 29 GAWKIAYADFVTALMAFFLMLWLISSTSADYRQAISEYFETPLMVVFSGGQ--------S 80 Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 + + I S E T +S + G Sbjct: 81 NDVTSSLIVGSYGEDKTFSSGQVNKGE--------------------------------- 107 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 +D + ++ +E L L + ++ L +++ L+ Sbjct: 108 GAVEDIAISVSDAGRLLHMQEVVRLKLLKAQLEQLIRTDPNLNQFKEQLQIDLTSE---- 163 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 G+ I IID +N PMF+ S+I P T+ +L+ IG L I + G Sbjct: 164 ------------GLRIMIIDAKNRPMFEIGSAILQPYTVEILRSIGSTLNRVPNKIGLSG 211 Query: 271 HTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 HTDA+ ++ + NW LS DRA ++ + L+ G+ +++I ++ G + L +DP + Sbjct: 212 HTDAANYQGGSAGYSNWDLSADRANASRRTLIAGGMGQEKILRVVGLSDSVLFNPADPYD 271 Query: 329 SANRRIDILVEDRQ 342 + NRRI I+V +++ Sbjct: 272 AHNRRISIIVMNQK 285 >gi|302383636|ref|YP_003819459.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] gi|302194264|gb|ADL01836.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 298 Score = 163 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 84/332 (25%), Positives = 139/332 (41%), Gaps = 48/332 (14%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 +D+ I+IKK + ++ G+WK+ YADF+T +MAFFL+MW+IN TD + K+ I +YF Sbjct: 2 SDRPILIKKVKKVVGGGHHGGAWKVAYADFVTAMMAFFLLMWLINTTDPEQKRGIAEYFA 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P + T+ G G T+ + + + Sbjct: 62 PASVSQTTSGSGGIL------------------------------GGTSLGEDGSKSSGS 91 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + L + +L + I E ++ AM+R Sbjct: 92 MSVLEQQAPEAPEDAPEDVGTNANLAAASEEELRQEIAAREAAEFASAAESLRQAMQRMP 151 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L +L+K++ + + T G+ I ++DQ MFD++S+ P V Sbjct: 152 ELAELSKQL----------------IIDQTPEGLRIQLVDQEGRSMFDQNSARPNARAQV 195 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ I V+ ISI GHT A A +W LS +RA ++ +L +GV DR Sbjct: 196 LLRAIAGVVNRLPNRISISGHTSAVAGSGRASVATDWPLSANRADASRAILQAAGVDADR 255 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + ++G A DP + NRRI I++ Sbjct: 256 VYSVAGKAGSDPLYPDDPSLAGNRRIAIVLLR 287 >gi|229588064|ref|YP_002870183.1| flagellar motor protein MotB [Pseudomonas fluorescens SBW25] gi|229359930|emb|CAY46784.1| chemotaxis MotB protein [Pseudomonas fluorescens SBW25] Length = 339 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 82/334 (24%), Positives = 126/334 (37%), Gaps = 63/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W+++ + K AI YF Sbjct: 2 ENNQPIIIKRVKRFA-AGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 D E + IDL + T ++ +E Sbjct: 61 K--------------DPIGFSESGTPFVIDLGGSPQLAPERTINPEVKTEAPQEKIPIER 106 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + Q + L ++ + Sbjct: 107 DTVEAMAEQVEQERLELLLQELQT------------------------------------ 130 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + FE T G+ I I D N PMFD S+ P Sbjct: 131 -----------KVEENPQLLKFKDQISFEITPDGLRIQITDAANRPMFDSGSARLKPYFE 179 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + ISI GHTDA P+ NW LS +RA +A + L+ + + Sbjct: 180 DILLAMADTIKAVPNKISISGHTDAKPYAGQGDFGNWELSANRANAARRALVAGSYPDPQ 239 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ GFA +L DP N NRRIDI+V ++ Sbjct: 240 VARVVGFASSQLFDHKDPFNPINRRIDIVVLTKK 273 >gi|315179650|gb|ADT86564.1| lateral flagellar motor protein B [Vibrio furnissii NCTC 11218] Length = 330 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 73/331 (22%), Positives = 122/331 (36%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ D P++ G+WK+ ADFM LMA FLV+W++ + + +KAI Sbjct: 3 KQEHVVFKRSTRSHDEPHHGGAWKVAMADFMIALMALFLVLWVMQVVNKEERKAIV---- 58 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 +L +AS NP + S E + D T+ + Sbjct: 59 ---AHLHSASVFDRSYGNPFDTSQSISPIDLASESSVPSKHDANHTVTSFYNGNGNGPES 115 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + ++ Sbjct: 116 DAIIPGN------------------------------------------------FDTQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK I + + + A V T G+ I + D MF + + P Sbjct: 128 QLTILAKVIEAMMRQISAQG---NVHVSVTPQGLRIVLQDDYKQHMFSRGGTELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + V + I GHTD++ F+ R NW LS +RA A Q L+ G+ E R Sbjct: 185 LLLALAPVFQRVENPLIISGHTDSTAFKQRFSHRTNWELSANRANIARQTLVAGGMPEQR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L +P S NRRI++ V Sbjct: 245 VLQVTGMSDRALLNPDEPDGSENRRIELFVL 275 >gi|283832712|ref|ZP_06352453.1| chemotaxis MotB protein [Citrobacter youngae ATCC 29220] gi|291072391|gb|EFE10500.1| chemotaxis MotB protein [Citrobacter youngae ATCC 29220] Length = 309 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 76/333 (22%), Positives = 122/333 (36%), Gaps = 71/333 (21%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 I++K++ GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 6 HPIIVVKRRKHKGHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 +T I + Q+P + + H N DL+ Sbjct: 66 PLATAVTGGNRISNSQSPIPGGGDDYTQQQGEVHKQPNIDDLR----------------- 108 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + E L L + ++ + Sbjct: 109 ------------------------------------KRMEQSRLRKLRGDLDQLIEADPK 132 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L+ L + L V + + ++ R MF S+ P + Sbjct: 133 LRALRPHLKIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMRDI 176 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L+ I VL IS+ GHTD P+ N NW LS DRA ++ + L+ G+ + ++ Sbjct: 177 LRAIAPVLNGIPNRISLSGHTDDYPYANGEKGYSNWELSADRANASRRELVSGGLDDGKV 236 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ G A P ++ NRRI +LV ++Q Sbjct: 237 LRVVGMAATMRLSDRGPEDAINRRISLLVLNKQ 269 >gi|330807221|ref|YP_004351683.1| Chemotaxis protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375329|gb|AEA66679.1| Chemotaxis protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 344 Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 88/334 (26%), Positives = 137/334 (41%), Gaps = 63/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ I ++ G+WKI +ADF T +MAFFLV+W+++ + K AI YF Sbjct: 2 ENNQPIIIKRVKRIA-AGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 D E + IDL + ++ Sbjct: 61 K--------------DPVGFTESGTPYIIDLGGSPTLAPDT------------------- 87 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + K + +E + E L L +E ++ Sbjct: 88 ------------TLNPEVKSQPQPDKVTTDTEQVEGMAEQIERERLELLLQELQNKVEEN 135 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +LQ +I LFE T G+ I I+D N PMFD S+ P Sbjct: 136 PQLQKFKDQI----------------LFEITPNGLRIQIMDAENRPMFDSGSARLKPYFE 179 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + ISI GHTDA P+ NW LS +RA +A + L+ +++ Sbjct: 180 DILLAMADTIKAVPNKISISGHTDAKPYVGKGDFGNWELSANRANAARRALVAGSYPDEQ 239 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ G+A L DP N NRRIDI+V ++ Sbjct: 240 VARVVGYASSALFDRKDPFNPVNRRIDIVVLTKK 273 >gi|332531608|ref|ZP_08407505.1| OmpA/MotB [Hylemonella gracilis ATCC 19624] gi|332038971|gb|EGI75400.1| OmpA/MotB [Hylemonella gracilis ATCC 19624] Length = 318 Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 79/337 (23%), Positives = 131/337 (38%), Gaps = 67/337 (19%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 + + Q IIIK+ + G+WKI YADF+T +MAFFL+MW++ +T K + Sbjct: 4 DAKKLQPIIIKRVKKGGHGVH-GGAWKIAYADFVTAMMAFFLLMWLLGSTSKGDLKGLAD 62 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YF K M G + Sbjct: 63 YFRAPLKVSMVGGNGSGASSSIMPGG---------------------------------- 88 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 +LT + + L LS + A+ Sbjct: 89 --------------GADLTLTAGQHPEDASAADKRRRAETARRDAQRLAALSAKISAAIS 134 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +L+ +++I E+T G+ I I+D++ PMF ++ P Sbjct: 135 NNAQLRRFSRQIQ----------------LESTPDGLKIQIVDEQGRPMFTTGNAAVQPY 178 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVS 305 +L++IG L IS+ GHTD + + + NW LS DRA +A + L+ +G+ Sbjct: 179 MRDILREIGAALNGVENKISLDGHTDVTQYGNQGRSYSNWELSADRANAARRELVAAGMP 238 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ED++ +++G A L + +P ANRRI I+V ++ Sbjct: 239 EDKLLRVTGLAASNLLVPDNPTAPANRRISIMVLTKE 275 >gi|260767946|ref|ZP_05876880.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972] gi|260615976|gb|EEX41161.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972] Length = 330 Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 73/331 (22%), Positives = 122/331 (36%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ D P++ G+WK+ ADFM LMA FLV+W++ + + +KAI Sbjct: 3 KQEHVVFKRSTRSHDEPHHGGAWKVAMADFMIALMALFLVLWVMQVVNKEERKAIV---- 58 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 +L +AS NP + S E + D T+ + Sbjct: 59 ---AHLHSASVFDRSYGNPFDTSQSISPIDLASESSVPSKHDANHTVTSFYNGNGNGPES 115 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + ++ Sbjct: 116 DAIIPGN------------------------------------------------FDTQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK I + + + A V T G+ I + D MF + + P Sbjct: 128 QLTILAKVIEAMMRQISAQG---NVHVSVTPQGLRIVLQDDYKQHMFSRGGTELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + V + I GHTD++ F+ R NW LS +RA A Q L+ G+ E R Sbjct: 185 LLLALAPVFQRVENPLIISGHTDSTAFKRRFSHRTNWELSANRANIARQTLVAGGMPEQR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L +P S NRRI++ V Sbjct: 245 VLQVTGMSDRALLNPDEPDGSENRRIELFVL 275 >gi|330939854|gb|EGH43087.1| flagellar motor protein MotB [Pseudomonas syringae pv. pisi str. 1704B] Length = 333 Score = 162 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 77/319 (24%), Positives = 131/319 (41%), Gaps = 62/319 (19%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 ++ G+WKI +ADF T +MAFFLV+W++++ + A+ YF + S + Sbjct: 3 GGGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYFKDPVGFSDSGSPYVI 62 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 D PE S ++ + + ++V + Sbjct: 63 DLGGSPEMSPNQTLNPEVQTTPSPDTVPI------------------------------- 91 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 ++ + E E L L +E ++ +LQ +I Sbjct: 92 --------------EAENAETKAEAVEQERLEMLLQELQNKVQENPQLQKFKDQI----- 132 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 LFE T+ G+ I I+D N PMFD S+ P +L + + + Sbjct: 133 -----------LFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN 181 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 +SI GHTDA+PF NW LS +RA +A + L+ + +++++ G+A L Sbjct: 182 KVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSALYDH 241 Query: 324 SDPMNSANRRIDILVEDRQ 342 +P N NRRIDI+V ++ Sbjct: 242 QNPTNPINRRIDIVVLTKK 260 >gi|119503684|ref|ZP_01625767.1| Flagellar motor protein [marine gamma proteobacterium HTCC2080] gi|119460746|gb|EAW41838.1| Flagellar motor protein [marine gamma proteobacterium HTCC2080] Length = 312 Score = 162 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 110/324 (33%), Gaps = 53/324 (16%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 D P +W +AD M++LM FF+++ + D K I K Sbjct: 6 DEDSGPAGSPAWMATFADLMSLLMCFFVIILSFSELDVIKYKQIAASM-----------K 54 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 F Q E ++ K + + ++ + N++ + + Sbjct: 55 NAFGVQQKMEITAIPKGTSVVATEFQPGIPEPTPLERIEQVTTDQDLNSLRIGNPDARET 114 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + +E+ + L + T+L + L + + + Sbjct: 115 EAREVKDLITEEMEMLIEETEL---------------------------DAEMLRRLLKA 147 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + + E+ I+I I ++ F S+ + VL K G L Sbjct: 148 EIE-------AGQIDVESEGRTIVIRIREK---GSFPSGSAQLDIGFLEVLDKTGFALNE 197 Query: 262 STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHR 319 +I I GHTD P NW LS R+ + + L+ + R+ ISG A R Sbjct: 198 IKGLIFIEGHTDNVPINTARYGSNWDLSAARSVAVAERLLDGPKMDPIRL-TISGHADTR 256 Query: 320 LKIASDP--MNSANRRIDILVEDR 341 + + + NRR++++V+ Sbjct: 257 PQAPNQSWEGRAQNRRVEVVVKQP 280 >gi|288942612|ref|YP_003444852.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM 180] gi|288897984|gb|ADC63820.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180] Length = 309 Score = 162 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 103/325 (31%), Gaps = 52/325 (16%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N +W I Y D +T+LMAFF+VM+ ++ D + + Sbjct: 3 RRKRHEEHVNHEAWAIPYGDLVTLLMAFFVVMYAVSVVDAGKYSVLSESLIEAFGTSAPI 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 D + S +R + ++ S Sbjct: 63 D--------------------------PIQIGDPILESNPVSDDVRRSLAPVEVIAGSPA 96 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 E + L S L +R + L ++ + Sbjct: 97 IETTEPDLEPFSPTDVALAALIGS-------------------ASEEERGRILGEIREMS 137 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + + + + I ++I +F S+ P VL ++ +L Sbjct: 138 TELEEAMGSLIEAGNIEIKRQPYWIEVAINSNL---LFSSGSATLEPAARPVLARVARLL 194 Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I + GHTD P N NW LS RA + + ++G+ +R+ I G+ Sbjct: 195 GRRDVRIHVEGHTDNLPINNTIYPSNWELSSGRAATVVNLFAQNGIDPERMVAI-GYGQF 253 Query: 319 RLKIASDPM--NSANRRIDILVEDR 341 + ++ + NRR+ ++V Sbjct: 254 QPTDSNATEAGRARNRRVAVIVLPD 278 >gi|24375768|ref|NP_719811.1| flagellar motor protein MotB [Shewanella oneidensis MR-1] gi|24350713|gb|AAN57255.1|AE015861_7 chemotaxis motB protein [Shewanella oneidensis MR-1] Length = 275 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 69/326 (21%), Positives = 115/326 (35%), Gaps = 65/326 (19%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K D P N W I YADFMT+L A F+V++ +D + K + + Sbjct: 2 KKKKVDPPENHERWLISYADFMTLLFALFVVLYSFAMSDKNEAKFMVE------------ 49 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 G+ D + S ++ + + + + + + Sbjct: 50 --GLIDSLSKIGLISTPAVNALAPGGTSILEPNTVTSAVDAEPKL--------------- 92 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 E P + E + K + K Sbjct: 93 ------------------------------IETATTAPSTSESNNDLTNAKSNDTIRKYK 122 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L + + V + ++I I D N F S+ P+ I ++ KIGEV+ Sbjct: 123 EIISAKLKNEIENQEVEIDEVSDNLIIRIGD--NNTFFASGSAFIQPKFIPLIDKIGEVI 180 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 A + I GHTDA+ I DNW LS RA + +++ K GV+ RI + G A Sbjct: 181 ASVPGRVVIAGHTDATLPMEIYADNWDLSSLRATAVVRIMTKNKGVNPSRII-VQGLADT 239 Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342 + + +D NRRI+I++ Sbjct: 240 QPRFQNDTPEHRQKNRRIEIILNQGN 265 >gi|315499937|ref|YP_004088740.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48] gi|315417949|gb|ADU14589.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48] Length = 300 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 78/309 (25%), Positives = 129/309 (41%), Gaps = 44/309 (14%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 +WK+ YADF+T +MAFFL+MW+IN T + KK + YF P + T+ G Sbjct: 25 AWKVAYADFVTAMMAFFLLMWLINTTSPEQKKGVADYFAPASVSQTTSGSGGILAGTAIG 84 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 R ++ ++ + Q D Sbjct: 85 RDGVK------------------------QEGSMAFIEHMAPEAPDVQDRDGTAKNAAD- 119 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 +L + + K E ++ A++ L +L+K I Sbjct: 120 ---LSQTPEEELREELQKREEASFRSAAESLRQALQDMPELAELSKNI------------ 164 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 L + T G+ I +IDQ MF+ +S+ P ++L+ + +V+ ISI GH Sbjct: 165 ----LVDQTPEGLRIQLIDQEGRAMFNANSTQPNERARLLLRAVAKVVNQLPNRISITGH 220 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331 T +P + +W+LS DRA ++ QVL +GV +DR++++SG A DP + N Sbjct: 221 TTGTPGMGQSDKDWKLSADRADASRQVLQGAGVDQDRVAQVSGKAAKEPLYPDDPTLAGN 280 Query: 332 RRIDILVED 340 RRI I++ Sbjct: 281 RRIAIILLR 289 >gi|289208360|ref|YP_003460426.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] gi|288943991|gb|ADC71690.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] Length = 305 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 113/324 (34%), Gaps = 61/324 (18%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ ++ N+ +W I Y D +T+L+AFF+VM+ I++ DD + + + Sbjct: 3 RRKRHEEAENH-EAWAIPYGDLVTLLLAFFVVMYAISSVDDGKYRVLSESLVDAF----- 56 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + +++G ++ E + Q Sbjct: 57 --------------------------RAPAQTDPIQVGEPTVSREQSLDEMRALVPIDVQ 90 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 D + L + K + L ++A + Sbjct: 91 PG-------------------IVDDGVAPIDMAFSGLLDDAGTDDELQKFLEALAEVADE 131 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + ++ L+ D + + I I + +F S+ PE +L ++G + Sbjct: 132 LEMAMAPLIEDG---DLRVSREAYWLEIEITSRL---LFGSGSATLNPEARSLLDEVGAI 185 Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 LA + + GHTD P + NW LS RA + V +G+ + + G+ Sbjct: 186 LAPRVSRVHVEGHTDNVPIQTAVYPSNWELSSGRAAAVVSVFEDAGIEPKNLVAL-GYGE 244 Query: 318 HRLKIASDPM--NSANRRIDILVE 339 HR ++D + NRR+ I+V Sbjct: 245 HRPVASNDTEQGRAENRRVAIVVL 268 >gi|330445280|ref|ZP_08308932.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489471|dbj|GAA03429.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 292 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 107/313 (34%), Gaps = 39/313 (12%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 +AD T+LM FF+++ + D K I K F QN E + Sbjct: 1 MATFADLATLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KYAFGVQNMLEVN 49 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 K I + + ++ + + + + Sbjct: 50 DIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDMTQRTLDFHEGDSDRAGGTQRDAGNLTG 109 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 G+ +T+ ++ +E + K L + ++ L ++D Sbjct: 110 GQSKKTATENNENEQEELD-----------------KMQNQLKEVLTKALEREISDK--- 149 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 + E ++I I ++ F + S+ P+ ++++I ++ +I + GHT Sbjct: 150 VIEIENLGQQVVIRIREK---GAFPEGSAFLQPKFKPLVRQIALLVKDVPGIIRVSGHTA 206 Query: 274 ASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNS 329 + R NW LS RA S Q + K G ++ ++ G A + + Sbjct: 207 NDQMDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHTKM-RVVGLADTAPIADNKTKEGRA 265 Query: 330 ANRRIDILVEDRQ 342 NRR++I + + Sbjct: 266 KNRRVEISIMQGK 278 >gi|188533603|ref|YP_001907400.1| Chemotaxis protein [Erwinia tasmaniensis Et1/99] gi|188028645|emb|CAO96507.1| Chemotaxis protein [Erwinia tasmaniensis Et1/99] Length = 343 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 74/334 (22%), Positives = 127/334 (38%), Gaps = 71/334 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + ND+ I++ K+ + + GSWKI YADFMT +MAFFLVMW+I+ + I Y Sbjct: 2 KHNDRPIVLVKRKKANKHSGSHGSWKIAYADFMTAMMAFFLVMWLISISSPQQLVQIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K +T + D +P + T+ +++ G Sbjct: 62 FKTPLKVAITGGQRSSDSSSPIPGG---------GQDPTEKIGEVRKG------------ 100 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 D+ K + L L + ++ Sbjct: 101 --------------------------------FDMNVQKRKLDEVRLNRLRENLDQLIEA 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + + +V + + + ID +N PMF S+ Sbjct: 129 DPKLRALRPHL---IINMVEEGLRIQI-------------IDSQNRPMFKTGSAEVESYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I +L IS+ GHTD P+ NW LS DRA ++ + L+ G+S Sbjct: 173 RDILRAIAPILNQIPNRISMAGHTDDFPYAGGERGYSNWELSADRANASRRELVAGGLSS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 ++ ++ G + ++ NRRI +LV + Sbjct: 233 GKMLRVVGMSDTMKLKNRGANDAVNRRISLLVLN 266 >gi|285018158|ref|YP_003375869.1| flagellar motor protein [Xanthomonas albilineans GPE PC73] gi|283473376|emb|CBA15881.1| probable flagellar motor protein [Xanthomonas albilineans] Length = 317 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 102/327 (31%), Gaps = 62/327 (18%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + D N +W I YAD MT+L+AFF+VM+ ++ + + + N Sbjct: 3 RKHFQDEHTNHEAWAIPYADLMTLLLAFFVVMYALSTVNAAKYRVMANAMNAAF------ 56 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + +++G + Q I Sbjct: 57 ------------------------GGTAQTMHPVQVGEQPLQGQSDARATPI-------- 84 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 N+ LP + + ++ Q L + Sbjct: 85 -----------------QSSPALSILDPNRLPATSLPRPADALRDEQQLRRAQQQLDRIA 127 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S L K + + I + I +F S+ L ++ ++L Sbjct: 128 ERLDSALSPLIQKKLITVHRSGLWIEVEINSD---ILFGSGSATLDQSAHATLAQLAQIL 184 Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 A + + G+TD +P NW LS RA S + G+ R+S I G+ Sbjct: 185 ASVPNGVRVEGYTDNTPIATAQFPSNWELSAARAASVVHLFADQGLQPSRLSMI-GYGQF 243 Query: 319 RLKIASDPMNSA--NRRIDILVEDRQG 343 R ++D + NRR+ +++ G Sbjct: 244 RPHASNDTASGRNANRRVVLVILADSG 270 >gi|73539429|ref|YP_299796.1| flagellar motor protein MotB [Ralstonia eutropha JMP134] gi|72122766|gb|AAZ64952.1| OmpA/MotB [Ralstonia eutropha JMP134] Length = 325 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 70/335 (20%), Positives = 130/335 (38%), Gaps = 67/335 (20%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + + II+++ P+ SWKI YADFMT +MA FLV+W++++ + T + I +YF Sbjct: 5 NDMRPIIVRR-AKSHAKPHGNHSWKIAYADFMTAMMALFLVLWLLSSANKKTLEGIAEYF 63 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 K + + + Sbjct: 64 RMPLKVAVVGGERSSQTPSVIPGGG----------------------------------- 88 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + +D E + E+ N+ + + R Sbjct: 89 --------------MDVMRKDGEVMRAHDNDPSAEQRRNEFQEA------QRLRALKNRL 128 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +++ + + L+ D +G+ I I+D +N PMF + P Sbjct: 129 EQIIENNPMLKQFRPQLLLDITSEGLR---------IQILDTQNRPMFRTGRAEVEPYMR 179 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L++IG V+ +S+ GHTD++ + N NW LS DRA ++ + L+ G+ E Sbjct: 180 AILREIGPVINDLPNKVSLSGHTDSANYSNGERTYSNWELSSDRANASRRELIAGGMQEG 239 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A SD + NRRI I+V +++ Sbjct: 240 KVLRVLGLAATMPLDKSDLLAPVNRRISIVVLNQK 274 >gi|156933520|ref|YP_001437436.1| flagellar motor protein MotB [Cronobacter sakazakii ATCC BAA-894] gi|156531774|gb|ABU76600.1| hypothetical protein ESA_01340 [Cronobacter sakazakii ATCC BAA-894] Length = 310 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 73/335 (21%), Positives = 122/335 (36%), Gaps = 70/335 (20%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 N +I+KK+ + GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 4 SNHPVVIVKKRKHKGHGGGSHGSWKIAYADFMTAMMAFFLVMWLISISSPKELTQIAEYF 63 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +T I D ++P + + + ++D Sbjct: 64 RTPLSAAITGGHRIADSESPIPGGGDDVTQSQGEVKKQEPNID----------------- 106 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + E L L + ++ Sbjct: 107 -----------------------------------ELKKRMERNRLQKLRGDLDQLIEAD 131 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +L+ L + L V + + ++ R MF S+ P Sbjct: 132 PKLRALRPHLRIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMR 175 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L+ I VL +S+ GHTD P+ N NW LS DRA ++ + L+ G+ + Sbjct: 176 DILRAIAPVLNGIPNKVSLSGHTDDFPYANGERGYSNWELSADRANASRRELVIGGLDDG 235 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A + NRRI +LV ++Q Sbjct: 236 KVLRVVGMAATMRLAEKGANEALNRRISLLVLNKQ 270 >gi|320178162|gb|EFW53139.1| Flagellar motor rotation protein MotB [Shigella boydii ATCC 9905] Length = 308 Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 73/336 (21%), Positives = 119/336 (35%), Gaps = 71/336 (21%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + II+ K+ GSWKI YA FMT +MAFFLVMW+I+ + I +Y Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYAGFMTAMMAFFLVMWLISISSPKELIQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +T I + ++P + + + N +LK Sbjct: 62 FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK-------------- 107 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E L L + ++ Sbjct: 108 ---------------------------------------KRMEQSRLRKLRGDIDQLIES 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +L+ L + L V + + ++ R F S+ P Sbjct: 129 DPKLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FRTGSADVEPYM 172 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I VL IS+ GHTD P+ + NW LS DRA ++ + LM G+ Sbjct: 173 RDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDS 232 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 233 GKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 268 >gi|16125820|ref|NP_420384.1| chemotaxis MotB protein [Caulobacter crescentus CB15] gi|221234581|ref|YP_002517017.1| chemotaxis motB protein [Caulobacter crescentus NA1000] gi|13422964|gb|AAK23552.1| chemotaxis MotB protein [Caulobacter crescentus CB15] gi|220963753|gb|ACL95109.1| chemotaxis motB protein [Caulobacter crescentus NA1000] Length = 298 Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 47/312 (15%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 +WK+ YADF+T +MAFFL+MW++N T + K+ I YF P + Sbjct: 26 AWKVAYADFVTAMMAFFLLMWLLNTTSPEQKQGIADYFAPASISS--------------- 70 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 T + +G T+ + + + + + S Sbjct: 71 ---------------TTSGSGGILGGTSLGDDGAKADGKLSVVQQMAPEAQDVTKEAQSS 115 Query: 152 EKGKDLCKSTDL-EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 E S ++ K+E ++ +++ L +L+K+I Sbjct: 116 ETANLDSASEQALRDALAKKEQDSFASAAQSLRQSLQDMPELAELSKQI----------- 164 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 L + T G+ I ++DQ MF ++S P V+L+ + +V+ ++I G Sbjct: 165 -----LIDQTPEGLRIQLVDQEGRSMFKENSREPNDRARVLLRAVAKVINQLPNRVTISG 219 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 HT A+ F +W LS RA ++ QVL +GV +DR+ ++SG A+ A DP + Sbjct: 220 HTSANAFGKKQDGDWALSAQRADASRQVLRSAGVDDDRVYQVSGKANSEPLYADDPTLAG 279 Query: 331 NRRIDILVEDRQ 342 NRRI I++ + Sbjct: 280 NRRISIVLLREK 291 >gi|167647023|ref|YP_001684686.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31] gi|167349453|gb|ABZ72188.1| OmpA/MotB domain protein [Caulobacter sp. K31] Length = 299 Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 78/311 (25%), Positives = 125/311 (40%), Gaps = 44/311 (14%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 +WK+ YADF+T +MAFFL+MW++N T + K+ I YF P + T+ G Sbjct: 26 AWKVAYADFVTAMMAFFLLMWLLNTTSPEQKQGIADYFAPASISSSTSGSGGILGGTSLG 85 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 K Q L+ Sbjct: 86 DDGAKADGKMSVIQQMAPEAPDKTTKDGQSSTSASLD----------------------- 122 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 L ++ K+E ++ +++ L +L+K+I Sbjct: 123 -----SASEEALRDALAKKEQDSFASAAQSLRQSLQDMPELAELSKQIM----------- 166 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 + T G+ I +IDQ MF ++S P ++L+ I +++ I+I GH Sbjct: 167 -----IDQTPEGLRIQLIDQDGRSMFKENSREPNDRARILLRAIAKIINQLPNRITISGH 221 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331 T AS A +W LS +RA ++ QVL +GV EDRI ++SG A+ A DP + N Sbjct: 222 TSASAAGKRADSDWALSAERADASRQVLRGAGVDEDRIYQVSGKANSEPLYADDPTLAGN 281 Query: 332 RRIDILVEDRQ 342 RRI I++ + Sbjct: 282 RRISIVLLREK 292 >gi|189426486|ref|YP_001953663.1| OmpA/MotB domain protein [Geobacter lovleyi SZ] gi|189422745|gb|ACD97143.1| OmpA/MotB domain protein [Geobacter lovleyi SZ] Length = 280 Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 108/326 (33%), Gaps = 67/326 (20%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + N W + Y DF+T+L A F+ M+ + TD + + Q Sbjct: 4 KREPEKHANHERWLVSYGDFLTLLFAVFVAMYAMGQTDKKKAEELTQSLRESFGY----- 58 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 S + S D+K + + + + +Q Sbjct: 59 ----------------STQASAGQKGVLQSHDIKPIPAIKPEMAVIPITDRMPPAGPRQG 102 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + +R ++ + S Sbjct: 103 NVGGGAGSRQMAGE--------------------------------------KEFREMAS 124 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + LV V T+ G++IS+ + FD S+ E+I L+ I + L+ Sbjct: 125 AIEAYLVKQGFQNKVALSITQRGLVISLKEA---GFFDSGSAKLKSESIQTLRGIADTLS 181 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 + GHTD+ P R+ NW LS RA + L+ +G S + +S + G+ Sbjct: 182 RYANRFRVEGHTDSMPIRSTEFRSNWELSTARATNVIHFLIDSAGFSPESLSAV-GYGEF 240 Query: 319 RLKIASDPM--NSANRRIDILVEDRQ 342 + + + + NRR+DI++ + Sbjct: 241 QPVVDNSTAEQRAKNRRVDIVLLADE 266 >gi|260598378|ref|YP_003210949.1| flagellar motor protein MotB [Cronobacter turicensis z3032] gi|260217555|emb|CBA31774.1| Chemotaxis protein motB [Cronobacter turicensis z3032] Length = 310 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 121/335 (36%), Gaps = 70/335 (20%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 N +I+KK+ + GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 4 SNHPVVIVKKRKHKGHGGGSHGSWKIAYADFMTAMMAFFLVMWLISISSPKELTQIAEYF 63 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +T I D +P + + + ++D Sbjct: 64 RTPLSAAITGGHRIADSDSPIPGGGDDVTQTQGEVKKQEPNID----------------- 106 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + E L L + ++ Sbjct: 107 -----------------------------------ELKKRMERNRLQKLRGDLDQLIEAD 131 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +L+ L + L V + + ++ R MF S+ P Sbjct: 132 PKLRALRPHLRIDL---VQEGLRIQIIDSQNRP-------------MFKTGSAEVEPYMR 175 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L+ I VL +S+ GHTD P+ N NW LS DRA S+ + L+ G+ + Sbjct: 176 DILRAIAPVLNGIPNKVSLSGHTDDFPYANGERGYSNWELSADRANSSRRELVIGGLDDG 235 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A + NRRI +LV ++Q Sbjct: 236 KVLRVVGMAATMRLAEKGANEALNRRISLLVLNKQ 270 >gi|21244419|ref|NP_644001.1| flagellar motor protein MotB [Xanthomonas axonopodis pv. citri str. 306] gi|21110081|gb|AAM38537.1| chemotaxis MotB protein [Xanthomonas axonopodis pv. citri str. 306] Length = 380 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 134/332 (40%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +II++ + ++ G+WK+ +ADF+T +MAFFLV+W++ AT + + AI +YF Sbjct: 3 EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + S + G +L Sbjct: 63 R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + K D++ K K Sbjct: 95 TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 KRL+ L + + + + +L + T G+ I I+D++N PMFD P T Sbjct: 126 KRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 + +L+++ + ISI GHTD + + + A NW LS DRA +A + L+ G+S+ Sbjct: 186 VAILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVAGGMSDA 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++++ G + L +DP N NRRI I+V Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277 >gi|307824077|ref|ZP_07654304.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] gi|307734861|gb|EFO05711.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] Length = 302 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 76/335 (22%), Positives = 139/335 (41%), Gaps = 61/335 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + Q II+KK ++ G+WK+ YADF+T +MAFFL+MW++ T + Sbjct: 3 DQQPIIVKKVKKGGHA-HHGGAWKLAYADFVTAMMAFFLLMWLLGTTSE----------- 50 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 KGI + P ++S + L + + + ++ + Q + Sbjct: 51 -------PERKGIAEYFQDPFKASTEERGLDVGDRTSIIQAGGSDITSQDQGQVDK---- 99 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 EE P + K ++++K Sbjct: 100 -----------------------------------GKTAEEVEITPEEIEHKAEELEKEK 124 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 K S + + + E T G+ I I+D +N PM+ +S+ P+ + Sbjct: 125 LENLKQKIQYKIDSTPELNEFKEQIKLEITSEGLRILIVDAQNRPMYKLASAETEPQIKL 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ + V+ +S+ GHTDA PF NW LS DRA +A L ++G++E++ Sbjct: 185 ILRALAPVINELPNKVSLNGHTDARPFPPNQKKYTNWELSSDRANAARYELNQAGLAEEK 244 Query: 309 ISKISGFAHHRLK-IASDPMNSANRRIDILVEDRQ 342 I ++ G + ++P++ NRRI I+V +++ Sbjct: 245 ILRVIGLSSSVPYSATAEPLDPINRRISIIVMNKK 279 >gi|330447921|ref|ZP_08311569.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492112|dbj|GAA06066.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 332 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 67/331 (20%), Positives = 113/331 (34%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + I+ K+ ++ G+WK+ +ADFM LMA FLV+W++ + Sbjct: 3 KTEHIVFKRAAKRHSNEHHGGAWKVAFADFMIALMALFLVLWLM---------QVVDQQE 53 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 S +FDE + N + Sbjct: 54 RKAIVAYVNSASVFDEGAGNPFDTANSLSPIDFG-------------------------- 87 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 E + + + N P + + + Sbjct: 88 --------------------GEAADLSSHNAAMTIKSFFDGNGDGPERDALIPGSFETQA 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LA + T + A + + T G+ I + D MF + S+ P Sbjct: 128 QLAVLASVVEETAKQVSAQG---NISVDVTPQGLRIILQDDFKQNMFHRGSANLTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 VL I + + + I GHTDA+ F++ NW LS RA A Q L+ G+ +R Sbjct: 185 VLLNIAPIFKQISNSLIISGHTDATQFKSKFSRSTNWELSSSRANVARQTLIAGGMPSNR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G A L P S NRRI++ + Sbjct: 245 VLQVAGMAERALLNKQSPDASENRRIELFIL 275 >gi|294624638|ref|ZP_06703310.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601073|gb|EFF45138.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 383 Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 134/332 (40%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +II++ + ++ G+WK+ +ADF+T +MAFFLV+W++ AT + + AI +YF Sbjct: 3 EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + S + G +L Sbjct: 63 R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + K D++ K K Sbjct: 95 TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 KRL+ L + + + + +L + T G+ I I+D++N PMFD P T Sbjct: 126 KRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 + +L+++ + ISI GHTD + + + A NW LS DRA +A + L+ G+S+ Sbjct: 186 VAILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVAGGMSDA 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++++ G + L +DP N NRRI I+V Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277 >gi|294667303|ref|ZP_06732523.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602975|gb|EFF46406.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 387 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 134/332 (40%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +II++ + ++ G+WK+ +ADF+T +MAFFLV+W++ AT + + AI +YF Sbjct: 3 EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + S + G +L Sbjct: 63 R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + K D++ K K Sbjct: 95 TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 KRL+ L + + + + +L + T G+ I I+D++N PMFD P T Sbjct: 126 KRLEALMQDLREAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 + +L+++ + ISI GHTD + + + A NW LS DRA +A + L+ G+S+ Sbjct: 186 VAILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVAGGMSDA 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++++ G + L +DP N NRRI I+V Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277 >gi|78049371|ref|YP_365546.1| flagellar motor protein MotB [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325926421|ref|ZP_08187746.1| flagellar motor protein [Xanthomonas perforans 91-118] gi|78037801|emb|CAJ25546.1| flagellar motor protein MotB [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325543210|gb|EGD14648.1| flagellar motor protein [Xanthomonas perforans 91-118] Length = 385 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 77/332 (23%), Positives = 134/332 (40%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E +II++ + ++ G+WK+ +ADF+T +MAFFLV+W++ AT + + AI +YF Sbjct: 3 EAKSTVIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + S + G +L Sbjct: 63 R----------------------------NPSPLSGKSPAPSPGMNGPGGASTSMIKLGG 94 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + K D++ K K Sbjct: 95 TADMAKGQKDEMGRKRDNAADTDVDSR-----------------------------AKDK 125 Query: 190 KRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L + + + + +L + T G+ I I+D++N PMFD P T Sbjct: 126 RRLEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYT 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 + +L+++ + ISI GHTD + + + A NW LS DRA +A + L+ G+S+ Sbjct: 186 VAILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWELSADRANAARRALVAGGMSDA 245 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++++ G + L +DP N NRRI I+V Sbjct: 246 KVTRVVGLSSSVLFDKTDPQNPINRRISIVVM 277 >gi|149909329|ref|ZP_01897985.1| sodium-driven polar flagellar protein MotB [Moritella sp. PE36] gi|149807646|gb|EDM67594.1| sodium-driven polar flagellar protein MotB [Moritella sp. PE36] Length = 290 Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 109/311 (35%), Gaps = 36/311 (11%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 +AD M++LM FF+++ + D K I F QN E Sbjct: 1 MGTFADLMSLLMCFFVLLLSFSEMDVVKFKQIAGSMQ-----------HAFGVQNQIEVK 49 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 + K I + D T + E + + Q+ KN L DS Sbjct: 50 NIPKGTTVIAQEFRPGRPDPTPIETIMQHTIDNSEAELDFKDGEDQNAGGKNKLAEDSNG 109 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 GK ST E +D ++ + + L + Sbjct: 110 GKSPETSTRDNTPTQNIEVT-------------------EDTSELVKALAEALKEEIDSG 150 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 GV E I+I I ++ F S+ P V+QK+ ++LA +I+I GHT Sbjct: 151 GVEVENLGQQIIIRINEK---GSFPSGSAFLQPRFRPVIQKVAQLLATIPGIITIAGHTG 207 Query: 274 ASPFRNI-ARDNWRLSLDRAYSAY-QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331 + R W LS RA S ++L +E+R+ + G A + + N Sbjct: 208 KEQLHSELYRSKWDLSSQRAVSVAHEMLKVKEFTENRLI-VQGMADTQPLTDDENELRRN 266 Query: 332 RRIDILVEDRQ 342 RR++I + + Sbjct: 267 RRVEISIMQGK 277 >gi|294084383|ref|YP_003551141.1| flagellar MotB protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663956|gb|ADE39057.1| flagellar MotB protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 384 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 120/364 (32%), Gaps = 52/364 (14%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--------FGKNLM 77 P +W +AD T+LMAFF+++ + K I Sbjct: 20 PPVGAPAWMATFADMATLLMAFFVLILSFAEFNVPKFKQISGSLKNAFGVQRTVPIVEQP 79 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + + +P S T+ +D+K + +I Sbjct: 80 KGTTILSLNFSPNPAPSATNQMNQETTKDTQPDLDIKNKDKDDDGGDLDNAEDIVKALED 139 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL----- 192 + + + + + E+++ + L + + K A K + + Sbjct: 140 AIARGEIEVESLGEKVIVNFTPTNAPEENMPQLLKETLNAIEQAKDAAGKAEAEVLFGGL 199 Query: 193 -QDLAKKI--------------------------SSTLSGLVADNIVKGVLFETTRTGIL 225 Q L K + + + + D + + E + + Sbjct: 200 EQQLEKMLAAAESASASQSQSEAEEAEAQEQQEKQNAQAAIAEDELKVALRQEIGQGLVT 259 Query: 226 ISIIDQR------NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP--F 277 + + R + F S+ ++Q+I EV A + I++ GHTD P F Sbjct: 260 VEREEDRVLITVGSGGAFASGSAELTDSAREIMQQIAEVSAGGSSSINVSGHTDNVPLIF 319 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 + RDNW L+ RA S Q L SG V +R+ +S F ++D NRRI Sbjct: 320 GSQFRDNWDLAAARASSVVQALEDSGQVPGNRMQAVS-FGESMPLESNDTAEGRALNRRI 378 Query: 335 DILV 338 +I + Sbjct: 379 EIEI 382 >gi|241761142|ref|ZP_04759231.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374761|gb|EER64222.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 326 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 128/340 (37%), Gaps = 59/340 (17%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M +KN+ + II+KK + ++ G+WK+ YADF+T +MAFFL++W++ Sbjct: 1 MARKSNKNEPEIRPIIVKKIIDEGHGGHHGGAWKVAYADFVTAMMAFFLLLWLL------ 54 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 G KGI D NP L S Sbjct: 55 ------------GATNEKERKGIADYFNP----------------------SLTPESAAG 80 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + H K + K+ Sbjct: 81 SDGGMGFLKGDSITAPQDMPTHSKLAPNGQKLVAKNPDVIAQ-----------------A 123 Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++I+ ++R + L + + + + + V TR G+ I ++DQ + MF Sbjct: 124 KEIIKQNDRQRFEKLREMLEEHMKKDPSLARLQQSVRLVETREGLRIDLVDQSDFAMFTL 183 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV 298 + +P ++ ++ V+ +I +RGHTDA P+ + +NW LS RA + + Sbjct: 184 GTENMVPAAQKLIAEVARVIKDVPNMIIVRGHTDALPYASGQNVNNWTLSAARADATRRG 243 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 L+ GV +R +I G A + + M+ NRR+ I + Sbjct: 244 LIAGGVDINRFDRIEGVADREPYVPENRMDPRNRRMSITL 283 >gi|254473231|ref|ZP_05086629.1| chemotaxis MotB protein [Pseudovibrio sp. JE062] gi|211957952|gb|EEA93154.1| chemotaxis MotB protein [Pseudovibrio sp. JE062] Length = 286 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 64/322 (19%), Positives = 111/322 (34%), Gaps = 51/322 (15%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 P W + +AD M++L+ FF+++ + D + + Sbjct: 4 RKKQAPAGAPGWMVTFADLMSLLVCFFVLIISFSVQDKQKLQVVAGSIK----------- 52 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 D + +TK + L+I + + + +E Sbjct: 53 -----------------DAFGIKQVTKRAGVLEIEGVPLRDFMKDITYEKQITDADFATE 95 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + E K D+EK + A + + +++ I Sbjct: 96 SHPEKRKQGPEANTHTTKKADIEKPRQ------FATAAVSLRQAFQEMPEITEISNNI-- 147 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + E T G+ I I+DQ M+ + S P T +L K+ VLA Sbjct: 148 --------------ILEETDEGLNILIVDQEGRSMYPEGSKYPYEITRRLLAKMAPVLAK 193 Query: 262 STEVISIRGHTDA-SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + I GHT + + W LS DRA +A Q+L + G+ + I + G A Sbjct: 194 LPNRVRITGHTTTGQLITSPSETGWELSADRANTARQILSEYGLPSNNIHSVVGKADTEP 253 Query: 321 KIASDPMNSANRRIDILVEDRQ 342 +DP +ANRRI IL+ + Sbjct: 254 LFPNDPYLAANRRISILLMAEE 275 >gi|90415360|ref|ZP_01223294.1| flagellar motor protein [marine gamma proteobacterium HTCC2207] gi|90332683|gb|EAS47853.1| flagellar motor protein [marine gamma proteobacterium HTCC2207] Length = 408 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 122/359 (33%), Gaps = 50/359 (13%) Query: 29 NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP-------FGKNLMTASK 81 +W +AD T+LMAFF+++ + K + N ++ Sbjct: 54 GAPAWMATFADMATLLMAFFVLILSFAHMNVPKYKEVSGSMNQKFGVQKIVPVVEQPTAE 113 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 + +Q + +D+ ++ + + KK ++ L S E Sbjct: 114 NVIAKQYKTAKVDPTLLDVIQEQTTAERQPEDVELKDKLKKNKSSTNSDAEVLKKSLAKE 173 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK-------------- 187 + + + K + + KS + E+ +K ++ Sbjct: 174 IAEGKVKVTIKDKKLVVEVVSEAKSGKQGEDRKSKSGAKLLQSDLEVYAKVASAQAQVAS 233 Query: 188 --------------------RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + Q +A + + L + + I++ Sbjct: 234 QVQVIDASPESLDGDLSGRGSQAGEQAIADQYEKIRARLSNEIAEGLAEVDRDGDKIVVR 293 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP--FRNIARDNW 285 + ++ F + P +L K+GE + + +I+I GHTD P F R NW Sbjct: 294 LAER---GSFRSGYADLQPSFKPLLDKVGESITDGSSLITIEGHTDNIPMAFSERFRSNW 350 Query: 286 RLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 LS R+ + L+ S + + R+ ++G A + + +D NRRI+++++ Sbjct: 351 DLSAARSAAVADYLLNSSEIDDGRV-SVTGLADTKPLVPNDSPEGRSKNRRIEVIIDGS 408 >gi|229543005|ref|ZP_04432065.1| OmpA/MotB domain protein [Bacillus coagulans 36D1] gi|229327425|gb|EEN93100.1| OmpA/MotB domain protein [Bacillus coagulans 36D1] Length = 274 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 117/330 (35%), Gaps = 69/330 (20%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 KK+ + N +W + Y+DF+T+L+A F+V++ +++ D + + N Sbjct: 3 KKRKKRQEEEGNSEAWLLPYSDFLTLLLALFIVLFAMSSIDAQKFQKFSKVLNGVFV--- 59 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 FD + D Sbjct: 60 -GGTSFFDYTKQTSGDDNSTSDT------------------------------------E 82 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + E KN ++ + + KS + N + +L++ + Sbjct: 83 KFLEQKKNDAQKNGDSTTNGSKSNSTTDASNG-----------------QGDAQLKETQQ 125 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 +I++ ++ + + T G+LI+I D +FD + E I + + Sbjct: 126 RINTYIAH---NKLEGKFETSLTGEGLLITIRDN---VLFDSGKAEVRKEDIKTAKALSN 179 Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV-LMKSGVSEDRISKISG 314 +L I + GHTD P N + NW LS+ RA + ++ L ++ + G Sbjct: 180 LLVMDPPRSIIVSGHTDNVPIHNSVFQSNWDLSVMRATNFLKIILENKNLNP-KYFSAKG 238 Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + + ++D + NRR+++L+ + Sbjct: 239 YGEYHPIASNDTQGGRAKNRRVEVLILPKN 268 >gi|254492051|ref|ZP_05105228.1| OmpA family protein [Methylophaga thiooxidans DMS010] gi|224462748|gb|EEF79020.1| OmpA family protein [Methylophaga thiooxydans DMS010] Length = 297 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 107/326 (32%), Gaps = 66/326 (20%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 L ++ +AD M++LM FF+++ D K + + Sbjct: 6 QRTKRDAEGLPAYMATFADLMSLLMCFFVLLLSFAEMDALKYKMVVKSLE---------- 55 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 F Q + K I + + ++ + +++ Sbjct: 56 -NAFGVQREVAANEIPKGTSIIAQEFSPGEPKPTPLKVVRQDTMDDSREQLKVTMDAE-- 112 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 LA ++ +++ + +K Sbjct: 113 ------------------------------------------KLAEQQAQQVAEETQKFK 130 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + + + ++ E+ + I+I I ++ F + + I +L+KI VL Sbjct: 131 EALEKEIEEGL---IVVESQYSRIVIRIREK---GSFMSGDARLNNDFIPILKKIHNVLL 184 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHH 318 + I++ GHTD P NW LS RA S L+ G + +R + G+A Sbjct: 185 KTDGRIAVAGHTDDVPINTSRYRSNWELSTSRATSVVHELLAPGDMPAERFV-LEGYADT 243 Query: 319 RLKIASD--PMNSANRRIDILVEDRQ 342 + +D + NRR++I+V Sbjct: 244 KPLEPNDSPTNRARNRRVEIIVLKSP 269 >gi|89100891|ref|ZP_01173740.1| flagellar motor protein [Bacillus sp. NRRL B-14911] gi|89084378|gb|EAR63530.1| flagellar motor protein [Bacillus sp. NRRL B-14911] Length = 269 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 125/328 (38%), Gaps = 66/328 (20%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 K+K + SW I YAD +T+L+A F+V++ +++ D +A+ + FN Sbjct: 3 KRKKKEHHEEHVDESWLIPYADILTLLLALFIVLFAMSSVDARKFEALSKAFNDAFN--- 59 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 G FD +P + S Sbjct: 60 -GGTGFFDFPSP--------------------------------------MPDGAMQSAD 80 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + K+ + + S G D+E ++ KI + K+ L+++ + Sbjct: 81 KADTENKDEVEKASAAGTLEEGQNDME--------------AEGKIQKLTDKQELKEVEE 126 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 K+ + + + + + T G+L++I D F S+ + + +IGE Sbjct: 127 KVKTYIQN---NGLTDKLETSLTDEGLLVTIRDN---VFFASGSAEVRSGELTIADEIGE 180 Query: 258 VL-AHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L I I GHTD P +N NW LS+ RA + ++L+ + + R GF Sbjct: 181 LLVMDPPRNIIISGHTDNMPIKNSEFESNWELSVMRAVNFMKILLHNKDLDARAFSAKGF 240 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDR 341 + ++D NRR++IL+ R Sbjct: 241 GEFQPAASNDTKEGRDKNRRVEILILPR 268 >gi|260752895|ref|YP_003225788.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552258|gb|ACV75204.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 326 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 128/340 (37%), Gaps = 59/340 (17%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M +KN+ + II+KK + ++ G+WK+ YADF+T +MAFFL++W++ Sbjct: 1 MARKSNKNEPEIRPIIVKKIIDEGHGGHHGGAWKVAYADFVTAMMAFFLLLWLL------ 54 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 G KGI D NP L S Sbjct: 55 ------------GATNEKERKGIADYFNP----------------------SLTPESAAG 80 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + H K + K+ Sbjct: 81 SDGGMGFLKGDSITAPQDMPTHSKLAPNGQKLVAKNPDVIAQ-----------------A 123 Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++I+ ++R + L + + + + + V TR G+ I ++DQ + MF Sbjct: 124 KEIIKQNDRQRFEKLREMLEEHMKKDPSLARLQQSVRLVETREGLRIDLVDQSDFAMFTL 183 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV 298 + +P ++ ++ V+ +I +RGHTDA P+ + +NW LS RA + + Sbjct: 184 GTENMVPAAQKLIAEVARVIKDVPNMIIVRGHTDALPYASGQNVNNWTLSAARADATRRG 243 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 L+ GV +R +I G A + + M+ NRR+ I + Sbjct: 244 LIAGGVDINRFDRIEGVADREPYVPENRMDPRNRRMSITL 283 >gi|253575920|ref|ZP_04853254.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251844714|gb|EES72728.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 293 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 64/315 (20%), Positives = 114/315 (36%), Gaps = 64/315 (20%) Query: 31 GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90 W I YAD +T+L+ FF++M+ ++ D + + + K Sbjct: 34 DRWMITYADLITLLLIFFVMMYAMSRLDVEKYEVVTSSLQQTFK---------------- 77 Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 + ++L G T +Y S S+Q E + D Sbjct: 78 ---------------GGDSILELGSGITGTADRYSHKNPPASADSGSKQGEGQGTTGQAD 122 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 S PL++ ++ K+++ L +L K I S + ++ Sbjct: 123 S---------------------SGQAPLTERELAFRKQEEELANLMKLIESYIKD---NS 158 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + + GI I++ D+ +FD + + L K+ + VISI G Sbjct: 159 LEDQIHVADLPQGISITLSDR---FLFDTGKADLKSGSAKTLAKLASLFRQLDTVISIEG 215 Query: 271 HTDASPF--RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP- 326 HTD P + +DNW LS RA S + + + + + +G+A R +D Sbjct: 216 HTDNLPIVYASEFKDNWELSGARALSVLRFFVDKEKLDPQQF-QYAGYADTRPAADNDTP 274 Query: 327 -MNSANRRIDILVED 340 NRR++I V Sbjct: 275 EGRQKNRRVEITVLR 289 >gi|262273510|ref|ZP_06051324.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP 101886] gi|262222488|gb|EEY73799.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP 101886] Length = 340 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 126/334 (37%), Gaps = 44/334 (13%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + IIIKKK D ++ G+WK+ +ADF +MAFF+V+WI+ T + ++ I+ Sbjct: 3 HDKQHVIIIKKKKHGDHDDHHGGAWKVAFADFAIAMMAFFMVLWIMEITSKEEREEIQYR 62 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 + + +FD +N P + E Sbjct: 63 LQQ--STIFESIDNLFDIRNSPFPIDFG-------------------------GEASPFE 95 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 N I + + + + S+ + + LS I + Sbjct: 96 NPINSTLSGTSELGNSLHEQVPQGEKGNNAGQGENAMSVMEGQYLNAAQLSGLAIALKEI 155 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 L + + + G+ I I D + MF + S+ P Sbjct: 156 VASLDAMEN-----------------IHLDVVPQGLRIQIQDSKRNVMFQRGSAQMTPFF 198 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + L + I GHTD++ F A NW LS DRA A QV++ SG+ + + Sbjct: 199 EDILYALSPKLGKIQNRLIISGHTDSTVFSTQAYSNWELSGDRALKARQVMVGSGLPQQQ 258 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ A L +DP + NRRI+I+V ++ Sbjct: 259 VLQVVAMADRTLLDEADPQSGKNRRIEIMVLTKE 292 >gi|192359644|ref|YP_001981667.1| chemotaxis protein MotB [Cellvibrio japonicus Ueda107] gi|190685809|gb|ACE83487.1| chemotaxis protein MotB [Cellvibrio japonicus Ueda107] Length = 333 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 86/336 (25%), Positives = 145/336 (43%), Gaps = 60/336 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + Q +IIKK+ ++ SWK+ ADFMT +MAFFL+MW++ T ++ KKAI QY Sbjct: 2 ERGAQPLIIKKRKGRGH-GHHGSSWKVALADFMTAMMAFFLLMWLLGGTTEEEKKAISQY 60 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F G + + DL + + ++ Q + E Sbjct: 61 FQDPGSQYVIG----------------------------EGGADLGLINQDRPIQQSQAE 92 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + +N+Q+ +T D K + Sbjct: 93 QDTMETANTQEFTQDDQEVTEDKIKREM----------------------------ERIE 124 Query: 189 KKRLQDLAKKISSTLSGL--VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 ++LQ+L +++ + ++ L V I +L + T G+ I I+D+ PMFD S+ Sbjct: 125 NEQLQELKEQLETEINQLDSVFQQIKDQILIDFTALGLRIQIVDKDQRPMFDVGSANLKT 184 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVS 305 + VLQ + +L ISI GHTDA+P+ N NW LS DRA +A + +++ Sbjct: 185 YSKEVLQALAPILDKVPNKISITGHTDATPYGANATYTNWELSADRANAARRAMLEGSYP 244 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 E++++ + G + P+ NRRI I+V + Sbjct: 245 ENKVATVQGMGSVAPLLVDKPLEPINRRIAIIVLKK 280 >gi|254512283|ref|ZP_05124350.1| chemotaxis protein MotB [Rhodobacteraceae bacterium KLH11] gi|221535994|gb|EEE38982.1| chemotaxis protein MotB [Rhodobacteraceae bacterium KLH11] Length = 279 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 69/332 (20%), Positives = 121/332 (36%), Gaps = 58/332 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 Q N IIIKKK ++ G+WK+ YADF+T +MAFF++MW++NAT + +K + Y Sbjct: 4 QTNVAPIIIKKKRVSGGDGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTETQRKGLADY 63 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F P S +++ + + GS + + Sbjct: 64 ---------------FSPTIPLNPVSGGGDGAFGGDNMFSENTMVMDGSGASNRNPTEAK 108 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 Q A + Sbjct: 109 KARGSTGVDAQGGGKG----------------------------------------AFED 128 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 L+ A+ + T LV+D ++K ++ T G+++ + + P+F+ S P Sbjct: 129 FSSLE--AQLLGRTGESLVSDEMLKHIVTRVTDEGLVVELFSTEDQPLFESGSDKPTQMM 186 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + + T I++ GH ++P W LS RA Q+L GV R Sbjct: 187 RALTLLVARSSDLVTNSIAVEGHVRSAPVVLAHNPTWDLSTTRAQITRQLLQNKGVQPQR 246 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + +++G A + + PM N R++I+ Sbjct: 247 LVRVAGHADREHALEN-PMAVRNDRVEIIFLR 277 >gi|89093474|ref|ZP_01166422.1| flagellar motor protein [Oceanospirillum sp. MED92] gi|89082164|gb|EAR61388.1| flagellar motor protein [Oceanospirillum sp. MED92] Length = 313 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 109/346 (31%), Gaps = 66/346 (19%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ ++ + P L +W + D M++LM FF+++ + D Sbjct: 1 MSDDTEEQE-------------CPPCPPGLPAWLATFGDLMSLLMCFFVLLLSFSEMDVL 47 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 K + F QN + K I + + + + + Sbjct: 48 KFKQLAGSMREA-----------FGVQNQIKVEDIPKGTSIIAQEFSPGRPEPTPLNEVR 96 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + ++ D K D + + + Sbjct: 97 Q-----------------------MTVNNDMNTLDIRSKEGDSDSPDQEAGEQQELQKEQ 133 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 E+ + + LA++I + D + + FD Sbjct: 134 EQEAKEEAVEFAAALAEEIGDGSVEVETDGKKIIIR--------------IKEKGSFDSG 179 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVL 299 S+ E+I VL KI +VL +SI GH+D P+ NW LS+ RA + L Sbjct: 180 SAELKFESIPVLAKIRDVLLDVKGNVSIEGHSDNIPYAGRRFESNWDLSVARALAVAHEL 239 Query: 300 M-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + + R + G A + + +D NRR++I+V + Sbjct: 240 FGDPRIDQSRFK-VLGMADTKPLVPNDTRANRVKNRRVEIIVTKGK 284 >gi|329895993|ref|ZP_08271251.1| Flagellar motor rotation protein MotB [gamma proteobacterium IMCC3088] gi|328922074|gb|EGG29437.1| Flagellar motor rotation protein MotB [gamma proteobacterium IMCC3088] Length = 354 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 113/356 (31%), Gaps = 51/356 (14%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD-------- 85 +AD T+LMAFF+++ + K + N Sbjct: 1 MATFADMATLLMAFFVLILSFAEMNVPKFKDVSGSMNDSFGVQRKVPVVEPPLSDSVIAK 60 Query: 86 --EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI------------ 131 Q + ++ + I + + +L+ + + Sbjct: 61 QFSQAKVDTTALSVIQEQTTDELQPEDAELRTTTKPSDATLGSDIEKVRAALSEEIARGL 120 Query: 132 -------------------FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 L + ++S L +D+ + E Sbjct: 121 VEVVQENEKISVITKAASNEGLESGEESTQRGRQLDQDTISLFAKVADAQTQVVSEIEIR 180 Query: 173 YFLPPLSKEKILAMKRKKRLQDLA---KKISSTLSGLVADNIVKGVLFETTRTGILISII 229 P S E + + + L + V E + I I++ Sbjct: 181 DSSPSDSAESAQSQANAPAPPEDDIGDSDLEQIRQNLAPEISRSLVNVEMDQDQIKITLA 240 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP--FRNIARDNWRL 287 DQ F S+ PE + +L ++G+ ++ + V+++ GHTD+ P F + NW L Sbjct: 241 DQ---GAFVSGSADLRPEFLQLLNRVGDSISDTDGVVTVSGHTDSIPMAFSMRFKSNWDL 297 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 S R+ S L+ G D + G+A +D + NRRI+I+++ + Sbjct: 298 SAARSASVADYLITQGYLGDIEVSVQGYADTVPIATNDTAEGRAKNRRIEIMIDKK 353 >gi|296103598|ref|YP_003613744.1| chemotaxis protein MotB [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058057|gb|ADF62795.1| chemotaxis protein MotB [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 301 Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 74/330 (22%), Positives = 119/330 (36%), Gaps = 72/330 (21%) Query: 14 FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 +II +K ++ G+WKI YADFMT +MAFFLVMW+++ + D ++ I YF Sbjct: 6 PVIISRKRKKKKHAHHGGTWKIAYADFMTAMMAFFLVMWLLSQSTDMERELIADYFRMPL 65 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 K M + + Sbjct: 66 KPSMANGDKTSLSDSVIPGGGDDI------------------------------------ 89 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 L R E K S D K + ++ ++ RL Sbjct: 90 -------------LKRQGEVFKGQIASIDKHKRFESLKQAK-----EKLQKMIETDPRLN 131 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + I L L D ++ + R + S +P +LQ Sbjct: 132 NFKSNI---LLNLTNDGLLIQITDSQDRPMFRV-------------GSELPESYMNGILQ 175 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + +L +S+ GHTD+ P+ NW LS RA +A +VL++ G++++R + Sbjct: 176 ALVPLLQELPNALSLTGHTDSLPYAGGDGGYSNWELSAGRANAARRVLVRGGLNDERFLR 235 Query: 312 ISGFAHHRLKIASDPMNSANRRIDILVEDR 341 + G A + P ++ NRRI ILV R Sbjct: 236 VIGTASRMPLENTSPDSAVNRRISILVLSR 265 >gi|261340281|ref|ZP_05968139.1| chemotaxis MotB protein [Enterobacter cancerogenus ATCC 35316] gi|288317370|gb|EFC56308.1| chemotaxis MotB protein [Enterobacter cancerogenus ATCC 35316] Length = 309 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 72/334 (21%), Positives = 122/334 (36%), Gaps = 71/334 (21%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +I+KK+ + GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 5 SHPIVIVKKRKHKGHGHGSHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFR 64 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 +T + I + +P + + N +LK Sbjct: 65 TPLATAVTGGQRISNSDSPIPGGGDDYTQQKGEVKKEPNIDELK---------------- 108 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + E L + + ++ Sbjct: 109 -------------------------------------KRMEQARLKKVRGDLDQLIEADP 131 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L+ L + L V + + ++ R F S+ P Sbjct: 132 KLRALRPHLKIDL---VQEGLRIQIIDSQNRPM-------------FKTGSAEVEPYMRD 175 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ I VL +S+ GHTD P+ N NW LS DRA ++ + L+ G+ + + Sbjct: 176 ILRAIAPVLNGIPNRVSLSGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDDGK 235 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ G A P ++ NRRI +LV ++Q Sbjct: 236 VLRVVGMAATMRLTDRGPDDAINRRISLLVLNQQ 269 >gi|256376462|ref|YP_003100122.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827] gi|255920765|gb|ACU36276.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827] Length = 295 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 115/330 (34%), Gaps = 61/330 (18%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K ++ + W + YAD +T+LM F+VM+ +++ D + +++ + Sbjct: 7 RKNKHEEQHVHDERWMVTYADMITLLMVLFIVMFAMSSVDSQKFQELKKSL----AGAFS 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 S I S+ I+ + ++ S + K Sbjct: 63 GSDHITVFGAGGAGSANGGINPDPVDLKSEASGSGSTQDLSSK----------------- 105 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + + +K A + L++L ++ Sbjct: 106 --------------------------AAQEAVQQADRQKAAKNLKAAEAEVQHLKELGEQ 139 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 ++ L + + + + + + +F + LP+ ++ + V Sbjct: 140 MAKQLQDQGLGGTAQFRVDDRG-----LVVTVVTTSVVFAGDRAELLPDGQRIVDALAPV 194 Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316 L + + GHT+ P +W LS RA S + L++ G++ DR++ + G+A Sbjct: 195 LKSVGNRVEVDGHTNQLPVATVNYPSSWELSTARASSVVRYLIERDGLASDRLTAV-GYA 253 Query: 317 HHRLKIASDPMNSA----NRRIDILVEDRQ 342 R DP + NRR++++V Q Sbjct: 254 DTRPLY--DPADPRSVTGNRRVEVVVLSDQ 281 >gi|258624680|ref|ZP_05719615.1| chemotaxis LafU protein [Vibrio mimicus VM603] gi|258583072|gb|EEW07886.1| chemotaxis LafU protein [Vibrio mimicus VM603] Length = 315 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 77/331 (23%), Positives = 123/331 (37%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ + G+WKI ADFM LMA FLV+W++ + D +KAI + N Sbjct: 3 RQERVVFKRAKGYIYDEHYSGAWKIAMADFMIALMALFLVLWVMQTVNKDERKAIIAHLN 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + FD N S + IDL+ D + + S+ + E+N Sbjct: 63 SSNVFDESYG-NPFDTSN-----SISPIDLASDSSVPSRHNSNHVVSSFFQGDGDGPESN 116 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 N + ++ Sbjct: 117 SLIDGN-------------------------------------------------FETQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK + + + A V T G+ I + D MF + S P Sbjct: 128 QLTLLAKVVKKVIGQVSAQG---NVNVTVTPQGLRIVLQDDYKQFMFSRGGSELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + V I I GHTD+ PFR NW LS RA A + L+ G+ +R Sbjct: 185 LLLALAPVFQRVANPIIISGHTDSIPFRKKISKTSNWELSASRANVARKALVDGGMPAER 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L + P +S NRRI++ V Sbjct: 245 VLQVTGMSDRALLNQTAPDSSENRRIELFVL 275 >gi|94500546|ref|ZP_01307077.1| flagellar motor protein [Oceanobacter sp. RED65] gi|94427336|gb|EAT12315.1| flagellar motor protein [Oceanobacter sp. RED65] Length = 331 Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 112/319 (35%), Gaps = 43/319 (13%) Query: 29 NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88 L +W + D M++LM FF+++ D K + F Q Sbjct: 15 GLPAWLATFGDLMSLLMCFFVLLLSFAQMDAQKFKRLAGELR-----------MAFGVQT 63 Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 K I +H + + + + ++K ++++ L + + Sbjct: 64 TIRADDPPKGTSVIAKHFSPSIPEPTPINEIRQKTSDVTQSSLEVLCQDAITAQTEAKGN 123 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 + + +K A + ++ +LA ++ +S Sbjct: 124 TGKQTREITVPKES----------------ESQKKQAEQAEETAFELATELEREIS---- 163 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268 V ET + I+I I ++ F+ + E + VL I EVL IS+ Sbjct: 164 ---KGQVELETQGSKIVIRIREK---GSFNAGGAYVEDEFLPVLDTIREVLVEVPGRISV 217 Query: 269 RGHTDASPF--RNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASD 325 GHTD++P NW LS RA + + L + + E R ++ G R + Sbjct: 218 EGHTDSTPLGRGGRYNSNWELSAARAAAVAEYLFIAPEMPESRF-RVVGHGSVRPVAENK 276 Query: 326 PM--NSANRRIDILVEDRQ 342 + NRR++I+V + Sbjct: 277 TAEGRAKNRRVEIIVLRSK 295 >gi|262173363|ref|ZP_06041040.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451] gi|261890721|gb|EEY36708.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451] Length = 315 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 77/331 (23%), Positives = 123/331 (37%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ + G+WKI ADFM LMA FLV+W++ + D +KAI + N Sbjct: 3 RQERVVFKRAKGYIYDEHYSGAWKIAMADFMIALMALFLVLWVMQTVNKDERKAIIAHLN 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + FD N S + IDL+ D + + S+ + E+N Sbjct: 63 SSNVFDESYG-NPFDTSN-----SISPIDLASDSSVPSRHNSNHVVSSFFQGDGDGPESN 116 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 N + ++ Sbjct: 117 SLIDGN-------------------------------------------------FETQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK + + + A V T G+ I + D MF + S P Sbjct: 128 QLTLLAKVVKKVIGQVSAQG---NVNVTVTPQGLRIVLQDDYKQFMFSRGGSELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + V I I GHTD+ PFR NW LS RA A + L+ G+ +R Sbjct: 185 LLLALAPVFQRVANPIIISGHTDSIPFRKKISKTSNWELSASRANVARKTLVDGGMPAER 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L + P +S NRRI++ V Sbjct: 245 VLQVTGMSDRALLNQTAPDSSENRRIELFVL 275 >gi|254517028|ref|ZP_05129086.1| flagellar motor protein [gamma proteobacterium NOR5-3] gi|219674533|gb|EED30901.1| flagellar motor protein [gamma proteobacterium NOR5-3] Length = 286 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 111/313 (35%), Gaps = 56/313 (17%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 +AD M++LM FF+++ D + K I K F QN E Sbjct: 1 MATFADLMSLLMCFFVLLLSFAEMDVEKFKQIAGSM-----------KVAFGVQNEFELE 49 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 K + + T Q+ + + ++ + + Sbjct: 50 DIPKGTSVVATEFSPGQTSDTPIETIQQITDETTDPSLRVGDGEMEDAEVE--------- 100 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 + L++ + A K K L+D + Sbjct: 101 --------------ELLQQKITALLAETQADAEKLKDMLEDETQT--------------G 132 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 V E+ I + I +Q F S+ + + V+Q+I + L ISI GHTD Sbjct: 133 KVDVESDGRTITVRIREQ---GSFPSGSANLNTDFVPVMQRIRDALVEIPGTISIEGHTD 189 Query: 274 ASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330 ++P R NW LS RA S L++ G+ +D + GFA R +D ++ Sbjct: 190 STPLRGGRYESNWGLSSSRALSVTHELLRDGLLKDDRMMVVGFADTRPFTFNDTVEGRAS 249 Query: 331 NRRIDILVEDRQG 343 NRR++I++ RQG Sbjct: 250 NRRVEIVI--RQG 260 >gi|330951464|gb|EGH51724.1| flagellar motor protein MotB [Pseudomonas syringae Cit 7] Length = 351 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 67/336 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ + G WKI +ADF T +MAFFLV+W++++ + A+ YF Sbjct: 2 ENNQPIIIKRVKRFGGGHH-GGGWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQRLE 128 D + S IDL ++ N +++ ++ +T Sbjct: 61 K--------------DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVKTTPSPDTV---- 102 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 L + E Sbjct: 103 ---------------------------------------------PLEAETAETKAEEVE 117 Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 118 QERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPY 177 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 178 FEDILLALADTIKSVPNKISISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPD 237 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 238 SQVARVVGYASSALYDHQNPTNPVNRRIDIVVLTKK 273 >gi|258622497|ref|ZP_05717519.1| chemotaxis LafU protein [Vibrio mimicus VM573] gi|258585197|gb|EEW09924.1| chemotaxis LafU protein [Vibrio mimicus VM573] Length = 315 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 75/331 (22%), Positives = 120/331 (36%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ + G+WKI ADFM LMA FLV+W++ + D +KAI + N Sbjct: 3 RQERVVFKRAKGYIYDEHYSGAWKIAMADFMIALMALFLVLWVMQTVNKDERKAIIAHLN 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + FD N S + IDL+ D + + S+ + Sbjct: 63 SSNVFDESYG-NPFDTSN-----SISPIDLASDSSVPSRHNSNHVVSSFFQGDGD----- 111 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 P + ++ Sbjct: 112 --------------------------------------------GPESDSLIDGNFETQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK + + + A V T G+ I + D MF + S P Sbjct: 128 QLTLLAKVVKKVIGQVSAQG---NVNVTVTPQGLRIVLQDDYKQFMFSRGGSELTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + V I I GHTD+ PFR NW LS RA A + L+ G+ +R Sbjct: 185 LLLALAPVFQRVANPIIISGHTDSIPFRKKISKTSNWELSASRANVARKTLVDGGMPAER 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L + P +S NRRI++ V Sbjct: 245 VLQVTGMSDRALLNQTAPDSSENRRIELFVL 275 >gi|88704266|ref|ZP_01101980.1| motB family protein [Congregibacter litoralis KT71] gi|88701317|gb|EAQ98422.1| motB family protein [Congregibacter litoralis KT71] Length = 286 Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats. Identities = 68/313 (21%), Positives = 106/313 (33%), Gaps = 56/313 (17%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 +AD M++LM FF+++ D K I K F QN E Sbjct: 1 MATFADLMSLLMCFFVLLLSFAEMDVQKFKQIAGSM-----------KVAFGVQNEFELE 49 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 K + + I T Q+ Q + ++ Sbjct: 50 DIPKGTSVVATEFSPGETSDTIVDTIQQVTDQTTDPSLRVGEG----------------- 92 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 L E++L K L + L + Sbjct: 93 --------------------ELEDSEAEELLQQKITALLAETEADADKLKDMLEDEVQTG 132 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 V E+ I + I +Q F S+ + + V+ +I E L ISI GHTD Sbjct: 133 KVDVESDGRTITVRIREQ---GSFPSGSATLNTDFVPVMARIREALTEIPGTISIEGHTD 189 Query: 274 ASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330 ++P R NW LS RA S L++ G+ +D + GFA R +D ++ Sbjct: 190 STPLRGGRYESNWGLSSSRALSVTHELLREGLLKDDRMMVVGFADTRPFTFNDTVEGRAS 249 Query: 331 NRRIDILVEDRQG 343 NRR++I++ RQG Sbjct: 250 NRRVEIVI--RQG 260 >gi|90577360|ref|ZP_01233171.1| chemotaxis LafU protein [Vibrio angustum S14] gi|90440446|gb|EAS65626.1| chemotaxis LafU protein [Vibrio angustum S14] Length = 332 Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 67/331 (20%), Positives = 114/331 (34%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 N + I+ K+ + G+WK+ +ADFM LMA FLV+W++ Sbjct: 3 NTEQIVFKRAAKRHSHQQHGGAWKVAFADFMIALMALFLVLWLMQ--------------- 47 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 K I N + + Sbjct: 48 ---VVDQKERKAIVAYVNSASVFDEGAGNPF----------------------------- 75 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + + + E + + + N P + + ++ Sbjct: 76 --------DTANSLSPIDFGGEAADLSSHNAAMTIKSFFDGNGDGPESDALIPGSFETQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LA + T + A + + T G+ I + D MF + S+ P Sbjct: 128 QLAILASVVEETAKQVSAQG---NISVDVTPQGLRIILQDDFKQNMFHRGSANLTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 VL I + + + I GHTDA+PF+ R NW LS RA A Q L+ G+ +R Sbjct: 185 VLLSIAPIFKQISNSLIISGHTDATPFKRQFSNRSNWELSSSRANVARQTLIAGGMPSNR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++ A L P S NRRI++ + Sbjct: 245 VLQVAAMAERALLNKQSPNASENRRIELFIL 275 >gi|224825768|ref|ZP_03698872.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002] gi|224601992|gb|EEG08171.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002] Length = 325 Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 67/327 (20%), Positives = 118/327 (36%), Gaps = 59/327 (18%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 +IKK D + G+WK+ +ADF+ LM FLVMW++ + + +T + + Sbjct: 13 VIKKVSRRQDDGGHSGAWKVAFADFVLALMCLFLVMWLLASREQETMAQLLR-------- 64 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 +P +Q++I+ H + +L G Sbjct: 65 --------NGGGSPLAEGTQSRIEHQGTPHGSLIPRELVPG------------------- 97 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + S K +R DL Sbjct: 98 ---------------------QQATESRPNSQVKSSAQPSALDDGNGAKLRRRYDSAADL 136 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K V + + T G+ + + D MF++ S++ +LQK+ Sbjct: 137 QKLAKMMSDLSVEAGLAGNIQTVITPYGLRVMLHDTDKQGMFERGSAVINERFKHLLQKM 196 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIAR---DNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 G++ AH + + GHTD+ ++ NW LS +RA +A L+ G++ + I ++ Sbjct: 197 GQMFAHIDNQLLLVGHTDSLQYKGQDYAAFSNWSLSSNRAMAARMQLLLGGMASNGILQV 256 Query: 313 SGFAHHRLKIASDPMNSANRRIDILVE 339 G A A P + NRRI++LV Sbjct: 257 VGMADRAPLDARHPDAALNRRIELLVL 283 >gi|145298724|ref|YP_001141565.1| flagellar motor protein MotB [Aeromonas salmonicida subsp. salmonicida A449] gi|142851496|gb|ABO89817.1| Flagellar motor component MotB [Aeromonas salmonicida subsp. salmonicida A449] Length = 292 Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 113/327 (34%), Gaps = 53/327 (16%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + P N W + YADFMT+L A F+V++ + + Q F Sbjct: 4 KKKKPEAPENHERWLVSYADFMTLLFALFVVLYSFAMAKQSETRVLIQGF---------- 53 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 ++ + + S ++ + +T + + + + Sbjct: 54 ------IESLGKIGLISPPAGSPVMQGGTGILEPESRTTPSSPDKETVLEKDAPTAAADP 107 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + S K+ K ++ +Q + + Sbjct: 108 FNETIGASEKPSATEAWPHKT--------------------------KEQEWVQVTKQTL 141 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L + + E + ++I I ++ +F S+ P+ I ++ KI +L Sbjct: 142 NQQLKAQIESK---DLEVEQLGSQLVIRIGEK---ALFPADSAFLQPQFIPLVHKIAGIL 195 Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAH 317 A+ + + GHTD S R NW LS+ RA S +L + R+ G A Sbjct: 196 ANIPGKVVVTGHTDNSQAPLELYRSNWELSVLRAASIVHIMLTDPKLDATRVIA-QGVAD 254 Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342 + + +D ANRR++I + + Sbjct: 255 AQPRYPNDTAEHRQANRRVEITLSQGK 281 >gi|34498443|ref|NP_902658.1| chemotaxis lafU protein [Chromobacterium violaceum ATCC 12472] gi|34104298|gb|AAQ60657.1| chemotaxis lafU protein [Chromobacterium violaceum ATCC 12472] Length = 328 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 68/341 (19%), Positives = 125/341 (36%), Gaps = 63/341 (18%) Query: 5 GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 G KN+ +IKK + + G+WK+ +ADF+ LM FLV+W++ A D + + Sbjct: 3 GLKNKGEHDGAVIKKVSRRNAEEGHGGAWKVAFADFVLALMCLFLVLWVLAARDQENLQQ 62 Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + +P + + +ID + T D G + Sbjct: 63 LLT----------------TSGGSPLLQGNGKQIDHMGNPPGTLIPRDPIPGQAGSQAAS 106 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + + ++ Q ++ + Sbjct: 107 KSAVRDSDKRASEQPELPRRSYDSE----------------------------------- 131 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 DL K + + + T G+ +++ D MF++ S+I Sbjct: 132 --------ADLRKLAAQLSEMSQKAGLSSNLQTVITPYGLRVTLHDTDQQGMFERGSAIV 183 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVLM 300 P +LQ+IG +L + + GHTDA+ + A NW LS +RA +A +M Sbjct: 184 EPRFRSLLQQIGSMLGEIDNRLLVVGHTDAAQYHRAGGFAAMSNWSLSSNRAMAARLHMM 243 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 + G++ D + ++ G A P+ + NRRI++LV Sbjct: 244 QGGLAADSVLQVVGMAERAPLDKQHPLGAVNRRIELLVLTS 284 >gi|332284002|ref|YP_004415913.1| chemotaxis protein [Pusillimonas sp. T7-7] gi|330427955|gb|AEC19289.1| chemotaxis protein [Pusillimonas sp. T7-7] Length = 310 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 113/335 (33%), Gaps = 71/335 (21%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + I+ ++ + + SWKI YADF+T +MAFFLVMW++ + + +YF Sbjct: 2 NKQEPRIVIRRKRSHVSVKHNDSWKIAYADFVTAMMAFFLVMWLVALVPQKDLQEMAEYF 61 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + + + + I Sbjct: 62 RMPLMTAVKGGPKNDTGSSVIPSGNPSII------------------------------- 90 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + D + + L L E ++ Sbjct: 91 ----------------------PNPSPIASRGDARTEGDLRDVERLENLKAELETLIETD 128 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 LQ ++ L + D + ++ + R F S+ Sbjct: 129 PILQQFRPQL---LLDMTPDGLRIQIIDKQNRPM-------------FATGSAQVQSYMR 172 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSED 307 +L+++G +SI GHTD+ + + NW LS DRA +A + L+ G+ E Sbjct: 173 DILRQLGPTFNRLPNPLSISGHTDSIQYASGERDYSNWELSADRANAARRELVAGGMGES 232 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G + I +P + NRRI I+V +++ Sbjct: 233 KVKRVLGLSSSVSLIKDNPAAAVNRRISIVVLNQR 267 >gi|258592514|emb|CBE68823.1| Outer membrane protein, OmpA/MotB family [NC10 bacterium 'Dutch sediment'] Length = 308 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 79/342 (23%), Positives = 133/342 (38%), Gaps = 66/342 (19%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ +KN + I+ K ++ G+WK+ YADF+T +MA F+V+WI+ Sbjct: 1 MSEETEKNDNRPRKIV---KKKGGHGGHHGGAWKVAYADFVTAMMALFIVLWIVGQ-SKS 56 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 TK+AI YF S G + S+ D + ++ + Q Sbjct: 57 TKEAIAGYFKDPSNFSKGGSPGGLQSKGSIGVLSKG-GDPVVVAQQASQTMSPEGSEDTQ 115 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K + ++ I L ++ Sbjct: 116 KSPEDKEQDRI------------------------------------------HLEEAAE 133 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + ++R LQ L +I ++ G+ + +I+ FD Sbjct: 134 QFRQVIQRVPTLQALQGQIRIEITSE----------------GLRVQLIEGNRDSFFDLG 177 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR---NIARDNWRLSLDRAYSAYQ 297 SS P T +L I +A + + GHTDA P+ NW LS DRA SA + Sbjct: 178 SSRLKPVTRQLLAAIAHEVAKLPNQVVVEGHTDARPYSGNTGRDYSNWELSTDRANSARR 237 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + + G+ +++S++ G+A L +DP+++ANRRI ILV Sbjct: 238 TMEEVGLRRNQVSRVIGYADQHLFNPTDPLDTANRRISILVR 279 >gi|260431755|ref|ZP_05785726.1| chemotaxis protein MotB [Silicibacter lacuscaerulensis ITI-1157] gi|260415583|gb|EEX08842.1| chemotaxis protein MotB [Silicibacter lacuscaerulensis ITI-1157] Length = 279 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 67/334 (20%), Positives = 110/334 (32%), Gaps = 58/334 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 Q N IIIKKK ++ G+WK+ YADF+T +MAFF++MW++NAT + +K + Y Sbjct: 4 QTNAAPIIIKKKRTSGGDGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADY 63 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F+P + + + Sbjct: 64 FSPT----------------------------------------IPVNPVSGGGDGAFGG 83 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 +N+F + K D E F + A + Sbjct: 84 DNMFSEKTMVMDGSGATNKNPTEAKRARGSTGVDAEGGGRGATEDFSTLEATLLGRAGES 143 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + L ++ + + G R +F SS Sbjct: 144 MVSKKALKHIVTRVTDKGLVVELFDTDDEPLFEPGTDNPTQLMRALVLFVARSSDL---- 199 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 T I++ GH +SP W LS RA Q+L GV R Sbjct: 200 -------------VTNAIAVEGHVKSSPLVVAHNPAWELSTSRAQVIRQLLQDKGVRPSR 246 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++G A +L + + PM + N RI+I+ Sbjct: 247 LNRVTGHADRKLAVEN-PMAARNDRIEIIFLRDP 279 >gi|317121531|ref|YP_004101534.1| OmpA/MotB domain protein [Thermaerobacter marianensis DSM 12885] gi|315591511|gb|ADU50807.1| OmpA/MotB domain protein [Thermaerobacter marianensis DSM 12885] Length = 343 Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 107/313 (34%), Gaps = 59/313 (18%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 W + YAD +T+L+AFF+VM+ ++ + + + + Sbjct: 73 RWLLTYADLITLLLAFFVVMYAMSEVNATRY---------RALAASLRAAFATAGEALID 123 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 + + + + +++ ST N + Q E Sbjct: 124 TKGISPDARKVLDGLNQDTGQPFPPST------APGTNPAPEENPGGQGEGPGRLPVVTG 177 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 G ++RL+DL ++++ L + Sbjct: 178 PPG---------------------------------EEERLRDLVDQVNAALRDA---GL 201 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 + T G+ I DQ FD + PE +L+++ +LA I + GH Sbjct: 202 GGRASAQLTDRGVAIIFEDQ---VFFDLGRADLRPEGRELLRRLAPILARVPGTILVEGH 258 Query: 272 TDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM-- 327 TD P + NW LS RA + + L + G+ R+ +G+ R + + Sbjct: 259 TDNLPIHSDRFPSNWELSTARATTVVRFLAEQAGLDPRRL-AAAGYGEWRPRFPNTSEAN 317 Query: 328 NSANRRIDILVED 340 + NRR++I+V Sbjct: 318 RARNRRVEIVVLR 330 >gi|90423604|ref|YP_531974.1| OmpA/MotB [Rhodopseudomonas palustris BisB18] gi|90105618|gb|ABD87655.1| OmpA/MotB [Rhodopseudomonas palustris BisB18] Length = 275 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 105/321 (32%), Gaps = 60/321 (18%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + + W + +AD M +L+AFF+++ + D K + Sbjct: 3 KKKREEAHGGHGWFVTFADLMALLLAFFVMLVAFSTQDTKKLKIVAGSMREAFGVQ---- 58 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 S ++ ++ +K + N + Sbjct: 59 -------------SDSRYSGVLETDGIPTRGKVKNKAHVAIDDASNTPNPDEAGDSKAAG 105 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + S A++ L +L+K I Sbjct: 106 AQTQ--------------------------AEREFALASASLRQALQDLPELTELSKNIM 139 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 FE T+ G+ + IIDQ MF S +P T +++QK+ L Sbjct: 140 ----------------FEETKEGLNLEIIDQDGRSMFADGSKVPFERTRLLIQKLAAPLR 183 Query: 261 HSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + +SI GHT A N + LS DRA + Q+L + G+ + +SG A + Sbjct: 184 ATPLRVSIVGHTSAGLMPGRTDYNAFDLSSDRANAVRQILEREGLPTSHVFAVSGKADSQ 243 Query: 320 LKIASDPMNSANRRIDILVED 340 DPM +ANRR+ I + Sbjct: 244 PLFPDDPMLAANRRVTITLMR 264 >gi|188592087|ref|YP_001796685.1| flagellar motor protein motb [Cupriavidus taiwanensis LMG 19424] gi|170938461|emb|CAP63448.1| Chemotaxis protein MotB; Flagellar motor rotation, linking torque machinery to cell wall [Cupriavidus taiwanensis LMG 19424] Length = 321 Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 126/335 (37%), Gaps = 67/335 (20%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + + II+++ P+ SWKI YADFMT +MA FLV+W++++ + T + I +YF Sbjct: 5 HDMRPIIVRR-AKSHARPHGNHSWKIAYADFMTAMMALFLVLWLLSSANKKTLEGIAEYF 63 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 K + + + + + + Sbjct: 64 RMPLKVAIVGGEKSSQSPSVIPGGGMDVMRKDGE-------------------------- 97 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 +D ++ ++E L L + ++ Sbjct: 98 ----------------------IMRAHDNDPSDEQRRNEQQEAQRLRALKQRLEQIIENN 135 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L+ ++ L + ++ + +L N PMF S+ Sbjct: 136 PVLRQFRPQL---LLDITSEGLRIQILDTQ-------------NRPMFRTGSATVESYMR 179 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L++IG VL +S+ GHTDA+ + N NW LS DRA ++ + L+ G+ E Sbjct: 180 TILREIGPVLNELPNKVSLSGHTDAANYSNGERTYSNWELSGDRANASRRELIAGGMQEG 239 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A D + NRRI I+V +++ Sbjct: 240 KVLRVLGLAATMPLDKQDLLAPVNRRISIVVLNQK 274 >gi|311992350|gb|ADQ26748.1| flagellar stator protein [Aeromonas hydrophila] Length = 291 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 115/327 (35%), Gaps = 53/327 (16%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + P N W + YADFMT+L A F+V++ + + Q F Sbjct: 3 KKKKAEAPENHERWLVSYADFMTLLFALFVVLYSFAMAKQSETRVLIQGF---------- 52 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 ++ + + S ++ + +T + + + ++ S Sbjct: 53 ------IESLGKIGLISPAAGSPVMQGGTGILEPESKTTPSSPKKETVLEKDAPMAASDP 106 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + S K+ K ++ +Q KK+ Sbjct: 107 FNETIGASEKPSATESWPHKT--------------------------KEQEWVQVTKKKL 140 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L + K + E + ++I I ++ +F S+ P+ I ++ KI +L Sbjct: 141 EQQLKAQIE---SKDLEVEQLGSQLVIRIGEK---ALFPADSAFLQPQFIPLVNKISGIL 194 Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAH 317 A + + GHTD S R NW LS+ R+ S +L + R+ G A Sbjct: 195 ADIPGKVVVTGHTDNSQAPVELYRSNWELSVLRSASIVHTLLTNPKLDATRVIA-QGVAD 253 Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342 + + +D ANRR++I + + Sbjct: 254 AQPRYPNDTAEHRQANRRVEITLSQGK 280 >gi|39935079|ref|NP_947355.1| putative chemotaxis protein motB1 [Rhodopseudomonas palustris CGA009] gi|192290612|ref|YP_001991217.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1] gi|39648930|emb|CAE27451.1| putative chemotaxis protein motB1 [Rhodopseudomonas palustris CGA009] gi|192284361|gb|ACF00742.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1] Length = 274 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 66/326 (20%), Positives = 120/326 (36%), Gaps = 64/326 (19%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + KKK A + + W + +AD M +LM+FF+++ + D + Sbjct: 1 MAKKKKAEEHAGGHG--WFVTFADLMGLLMSFFVMLVAFSTQDKAKLMIVAGSMR----- 53 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + ++ + S ++ + + + E+ LS Sbjct: 54 -----------------------EAFGVQNDARYSGIIENDGLPTRGKVKNTEHVNPELS 90 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 ++ S IN +E+ S A++ + +L Sbjct: 91 TAKPSPGEVTRDEG-----------------INTKEDREFALASASLRQALQNMPEISEL 133 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +K I FE T+ G+ + I+DQ MF S +P T ++LQ++ Sbjct: 134 SKNIM----------------FEETKQGLNLEIMDQDGRSMFADGSKVPFERTRLLLQRL 177 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + ++I GHT + + N W LS DRA S Q+L + G+ I ++G Sbjct: 178 AVPLRATPLRVTIVGHTSSGLMPERSDYNGWDLSSDRANSVRQILEREGLPGSHIFAVTG 237 Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340 A + DP +ANRR+ I + Sbjct: 238 KADSQPLFPDDPSIAANRRVTITLMR 263 >gi|327478801|gb|AEA82111.1| OmpA/MotB domain-containing protein [Pseudomonas stutzeri DSM 4166] Length = 311 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 117/342 (34%), Gaps = 66/342 (19%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M S DK + ++ +I++++ + G+WK+ +ADF +MA F+V+WII + Sbjct: 1 MKSR-DKGKAGEREVIVRRRTKKGHGDEHGGAWKVAFADFTLAMMALFMVLWIIQPQMNL 59 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 T A + + + GIFD + + + + G Sbjct: 60 TNPAFGEQESNPLVD---GGAGIFDGTSTSPLELDGVPLRPAPDEPQRPREETARGEGET 116 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 R + Sbjct: 117 PADGTRRY------------------------------------------------ASTA 128 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 E + + +++ +V + + D + MF + Sbjct: 129 ELQALAALMQEVAGQVDALANLEVDVVPQGLRILIK-------------DDQQRFMFQRG 175 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVL 299 S++ P +L + VL+ + I GHTDA+P+R DNW LS DRA A VL Sbjct: 176 SAVLNPHFAKLLAVLAGVLSKVENKLIISGHTDATPYRLQSGYDNWNLSGDRALRARNVL 235 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 + +G+ + +++ A P + ANRR++IL+ Sbjct: 236 VDAGLPGRSVLQVTAQADVMPLRPEAPEDGANRRVEILLLTD 277 >gi|146341585|ref|YP_001206633.1| putative chemotaxis protein MotB [Bradyrhizobium sp. ORS278] gi|146194391|emb|CAL78416.1| putative chemotaxis protein MotB [Bradyrhizobium sp. ORS278] Length = 276 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 105/326 (32%), Gaps = 62/326 (19%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + KKK + W + +AD M ++M+FF+++ + D++ K + Sbjct: 1 MAKKKRGDAHGGGHG--WFVTFADLMGLMMSFFVMLVAFSTMDNNKLKIVAGSMREAFGV 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + E + + K I T + Sbjct: 59 QSESRYSGIVESDGLPTRPKLKNAAHISPEETSREPSPE--------------------- 97 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + + S A++ + ++ Sbjct: 98 ----------------------QEERQHTNGAKLKTDRQFALASASLRQALQDMPEMTEI 135 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +K I FE T+ G+ + I+DQ MF S P T +++K+ Sbjct: 136 SKHIM----------------FEETKQGLNLEIVDQDGRSMFADGSKTPYDRTRRLIEKL 179 Query: 256 GEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + + I GHT A + LS DRA + Q+L + G+ I +SG Sbjct: 180 AAPLKATPLRVQITGHTAAGFVPARSDYGAFDLSADRANAVRQILEREGLPPSHIFAVSG 239 Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340 A + DP +ANRR+ I + Sbjct: 240 KADTQPLFPDDPSLAANRRVTITLMR 265 >gi|27378912|ref|NP_770441.1| chemotaxis protein [Bradyrhizobium japonicum USDA 110] gi|27352062|dbj|BAC49066.1| pomB [Bradyrhizobium japonicum USDA 110] Length = 276 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 110/327 (33%), Gaps = 64/327 (19%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF-GK 74 + KKK + W + +AD M ++M+FF+++ + D + K + G Sbjct: 1 MAKKKRGDAHGGGHG--WFVTFADLMGLMMSFFVMLVAFSTQDANKLKIVAGSMRDAFGV 58 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 GI + P R +D E + + Sbjct: 59 QSEARYAGIVESDGLPTRPRLKNVDHIQPEDASNTPTPDQ-------------------- 98 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + D + + + A++ L + Sbjct: 99 ------------------------EDRDRTSGAKIKVDRNFALAAASLRQALQDMPELTE 134 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 ++K I FE T+ G+ + I+DQ MF S +P T +++K Sbjct: 135 MSKHIM----------------FEETKQGLNLEIVDQDGRSMFADGSKVPYDRTRRLVEK 178 Query: 255 IGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + L + +SI GHT A + LS DRA + Q+L + G+ I +S Sbjct: 179 LAIPLKATPLRVSIAGHTAAGFVPTRSDYGAFDLSADRANAVRQILEREGLPASHIFAVS 238 Query: 314 GFAHHRLKIASDPMNSANRRIDILVED 340 G A + DP +ANRR+ I + Sbjct: 239 GKADTQPLFPDDPSLAANRRVTITLMR 265 >gi|303248999|ref|ZP_07335244.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ] gi|302489585|gb|EFL49525.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ] Length = 317 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 110/315 (34%), Gaps = 35/315 (11%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I AD MT+L+ FFL++ ++ D + + + A K E P + Sbjct: 26 WPISLADMMTLLLCFFLLIVAVSHVDLNRYERVADSMQKAMVTEKPAPKPKKAEPKPVVK 85 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 + +T + L + + +E Sbjct: 86 KTTPPKPQPKPVEQPAMVRSKVSHTTLTSEPVAPLAQEKPKPEPTPAKPAAPTEQPKPAE 145 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 K K+ + E +K L+D+ K++++ L + Sbjct: 146 SVKAETKAP-----------------APESERTGPTRKSLEDIRKELTAKLGLDTSA--- 185 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 V G+ +++ R FD +S+ P + +L+ I L+ + +++ GHT Sbjct: 186 --VEIVPRENGVELNL---RGAAFFDLASAEIKPAALPLLRDIAATLSGTPYKVTVEGHT 240 Query: 273 DASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--- 328 D P + NW LS RA + L+ GV + + ++ G A + +D Sbjct: 241 DNLPIESWLYPSNWELSSARASRVARFLIDGGVPRNHL-RVEGLADTQPVAPNDDEAGRP 299 Query: 329 -----SANRRIDILV 338 + NRR+ ILV Sbjct: 300 IPENQAKNRRVVILV 314 >gi|117619885|ref|YP_856319.1| flagellar motor protein MotB [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561292|gb|ABK38240.1| chemotaxis protein MotB [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 291 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 115/327 (35%), Gaps = 53/327 (16%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + P N W + YADFMT+L A F+V++ + + Q F Sbjct: 3 KKKKAEAPENHERWLVSYADFMTLLFALFVVLYSFAMAKQSETRVLIQGF---------- 52 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 ++ + + S ++ + +T + + + ++ S Sbjct: 53 ------IESLGKIGLISPAAGSPVMQGGTGILEPESKTTPSSPKKETVLEKDAPMAASDP 106 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + S K+ K ++ +Q KK+ Sbjct: 107 FNETIGASEKPSATESWPHKT--------------------------KEQEWVQVTKKKL 140 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L + K + E + ++I I ++ +F S+ P+ I ++ KI +L Sbjct: 141 EQQLKAQIE---SKDLEVEQLGSQLVIRIGEK---ALFPADSAFLQPQFIPLVNKISGIL 194 Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAH 317 A + + GHTD S R NW LS+ R+ S +L + R+ G A Sbjct: 195 ADIPGKVVVTGHTDNSQAPVELYRSNWELSVLRSASIVHTLLTNPKLDATRVIA-QGVAD 253 Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342 + + +D ANRR++I + + Sbjct: 254 AQPRYPNDTPEHRQANRRVEITLSQGK 280 >gi|90415361|ref|ZP_01223295.1| flagellar motor protein [marine gamma proteobacterium HTCC2207] gi|90332684|gb|EAS47854.1| flagellar motor protein [marine gamma proteobacterium HTCC2207] Length = 399 Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 62/375 (16%), Positives = 114/375 (30%), Gaps = 59/375 (15%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM----- 77 + SW +AD T+LMAFF+++ + K + Sbjct: 28 CPPCKSGAPSWMATFADMATLLMAFFVLLLSFAEVNVPKFKQVAGSIASAFGVARIVPKI 87 Query: 78 --TASKGIFDEQNPPERSSQNKIDLSID--EHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 A+ + ++ P R+ ID E IT+ V K + + + Q ++ Sbjct: 88 SIPAATSLVTQEYTPSRAEATVIDQKRQRSEDITQEFVVKKTETEDADFKTQEEFRSVTE 147 Query: 134 LSNSQQSEHCKNSLTRD------------------------------------------- 150 Q + D Sbjct: 148 ALAEQIEQGQVQVTIEDNKVVVELRAESASGGQDYDNEASGGGGPISQTTIEVASKVVEL 207 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 K + + + ++ + +R QD+ K L AD Sbjct: 208 QSKISTEIQVRKQQLASGEQSGGLESDSDSNQSSGGSADQRRQDIDDKYQQIRLSLAADI 267 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 E I++ + Q F SS P +L ++G L+ ++ + + G Sbjct: 268 NNGLAEVERDGDKIIVRLASQ---GSFVSGSSNLQPGFTGLLTRVGNSLSVTSGKVRVEG 324 Query: 271 HTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327 HTD P NW LS R+ S + + ++GFA R +++ Sbjct: 325 HTDNIPVAFSERFNSNWDLSAARSASVADFFADNSELDQSAITVAGFADTRPIDSNNTAA 384 Query: 328 -NSANRRIDILVEDR 341 + NRRI+++V+ Sbjct: 385 GRARNRRIEVIVDGS 399 >gi|92117049|ref|YP_576778.1| OmpA/MotB [Nitrobacter hamburgensis X14] gi|91799943|gb|ABE62318.1| OmpA/MotB [Nitrobacter hamburgensis X14] Length = 276 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 65/326 (19%), Positives = 112/326 (34%), Gaps = 62/326 (19%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + KKK + W + +AD M ++M+FF+++ + D++ K + Sbjct: 1 MAKKKRGDAHGGGHG--WFVTFADLMGLMMSFFVMLVAFSTMDNNKLKIVAGSMRDA--- 55 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 F Q S + D KNS + T+ E + Sbjct: 56 --------FGVQTEVRYSGIIESDGLPTRPKLKNSAHVPPEETSATPTPNEQERFKTAGA 107 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + S A++ L +L Sbjct: 108 RLKTDREFALA--------------------------------SASLRQALQDMPELTEL 135 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +K I FE T+ G+ + I+DQ MF S P T ++++K+ Sbjct: 136 SKHIM----------------FEETKEGLNLEIVDQDGRSMFADGSREPYERTRMLIRKL 179 Query: 256 GEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + ISI GHT ++ D + LS DRA + Q+L + G+ I ++G Sbjct: 180 AAPLKATPLRISITGHTASNFIPTRSDYDGFDLSADRANAVRQILEREGLPPSHIFAVAG 239 Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340 + DP +ANRR+ I + Sbjct: 240 KSDSMPLFPDDPSLAANRRVTITLMR 265 >gi|316934820|ref|YP_004109802.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315602534|gb|ADU45069.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1] Length = 273 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 64/321 (19%), Positives = 116/321 (36%), Gaps = 62/321 (19%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + + W + +AD M +L+AFF+++ + D K + Sbjct: 3 KKKREEAHGGHGWFVTFADLMALLLAFFVMLVAFSTQDTQKLKIVAG------------- 49 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 + + + + S ++ + + + E+ LS ++ S Sbjct: 50 ---------------SMREAFGVQSDARYSGIIENDGLPTRGKVKNTEHVNPELSTAKPS 94 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 IN +E+ S A++ + +L+K I Sbjct: 95 PGEVTRDEG-----------------INTKEDREFALASASLRQALQNMPEIAELSKNIM 137 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 FE T+ G+ + I+DQ MF S +P T ++LQ++ L Sbjct: 138 ----------------FEETKQGLNLEIMDQDGRSMFADGSRVPFERTRLLLQRLAVPLR 181 Query: 261 HSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + ISI GHT + + N W LS DRA S Q+L + G+ I ++G + + Sbjct: 182 ATPLRISIVGHTSSGLLPERSDYNGWDLSSDRANSVRQILEREGLPGSHIFAVTGKSDSQ 241 Query: 320 LKIASDPMNSANRRIDILVED 340 DP +ANRR+ I + Sbjct: 242 PLFPEDPSIAANRRVTITLMR 262 >gi|114320660|ref|YP_742343.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227054|gb|ABI56853.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 285 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 65/318 (20%), Positives = 107/318 (33%), Gaps = 71/318 (22%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 ++ GSWK+ +ADFMT + A FLV+WI+ A DD + A+ YF Sbjct: 22 GGHHGGSWKVAFADFMTAMFAMFLVLWIVTAMDDPQRAAVADYFRNPTLVD--------- 72 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 + +++ + E + ++L T +Q SE + Sbjct: 73 -----DSGAESAPSMLDLEGGSPTPLELGETPTPMDQQRDEGAWISEGAMRDLLSELERA 127 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 ++ L Sbjct: 128 LEEKEELAEFR-------------------------------------------DQVLMD 144 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + D + ++ R FD S+ +L + VL Sbjct: 145 MTPDGLRIQLVDAENRPM-------------FDLGSARLRSYAAEILSGLTGVLERVPNA 191 Query: 266 ISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + I GHTDA PF NW LS DRA +A + L SG++ R++++ G A + Sbjct: 192 LRISGHTDARPFVGRRDYTNWELSTDRANAARRTLTASGIAPYRVAQVVGVAETQPLDPD 251 Query: 325 DPMNSANRRIDILVEDRQ 342 +PM NRRI I++ + Sbjct: 252 NPMAPVNRRISIILLTPE 269 >gi|304413521|ref|ZP_07394994.1| flagellar motor component [Candidatus Regiella insecticola LSR1] gi|304284364|gb|EFL92757.1| flagellar motor component [Candidatus Regiella insecticola LSR1] Length = 326 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 65/332 (19%), Positives = 120/332 (36%), Gaps = 58/332 (17%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + IIK+ + G+WK+ +ADF +MA F+V+WI+ A ++ + I + + Sbjct: 7 STHTTIIKRSAKKHHAGVHTGAWKVAFADFTLAMMALFMVLWIVGAVSEEERHEIMSHIH 66 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + + ++ + Sbjct: 67 ---------------------------GNTIFSNQSFLSIPLKNKNGADKNFEMLHTNKT 99 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + K + K++ K Sbjct: 100 RDSMKERARENRLKEPFKEPDQIRKEVVD---------------------------KSAT 132 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +QDL++ + N + E G+ I I D + MF SS++ P Sbjct: 133 EMQDLSRMVLEISKAH---NAQSNLNIEMVPQGLRILIQDDKKREMFPLSSALLTPFFTR 189 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L ++ VL + I GHTD + +R+ +NW LS +RA +A + L + G+ + I Sbjct: 190 LLAELAPVLNDLNNKVIITGHTDGARYRDQELYNNWNLSGERAMAARRALERGGLDDAHI 249 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +I+ A L DP+ +ANRRI+I+V + Sbjct: 250 LQINAMADQMLLDEKDPLGAANRRIEIMVLTK 281 >gi|146278768|ref|YP_001168927.1| flagellar motor protein-like protein [Rhodobacter sphaeroides ATCC 17025] gi|145557009|gb|ABP71622.1| Flagellar motor protein-like protein [Rhodobacter sphaeroides ATCC 17025] Length = 278 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 72/335 (21%), Positives = 124/335 (37%), Gaps = 60/335 (17%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 Q N ++IK+K + ++ G+WK+ YADF+T +MAFFL+MW++NAT + +K + Sbjct: 2 AGQSNAAPVVIKRKKVVQGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGLA 61 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP + G + + + + K Sbjct: 62 DYFNPTIPMNRVSGGGDGAFGGDSVFHDRTMTQTGTGAVDERATPENKARGERG------ 115 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 E EE L + K Sbjct: 116 -------------------------------------ETGEAAEEQARLEEVEKLLKART 138 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 ++ L + I + T G++I I D + P+F + P P Sbjct: 139 GESMTMERLLRHI----------------VTRITDEGLVIEIFDLPDVPLFLGDTDQPEP 182 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + + + EVL +T I++ GH + P I W LS RA +++ +G+ Sbjct: 183 ILPQIARLLAEVLPITTNRIAVSGHVRSYPITLIRNPAWDLSALRAQRMRELIESAGLPG 242 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +R +ISGFA + DPM N R+++++ + Sbjct: 243 ERTQRISGFADRKPATP-DPMAVRNNRLEVILLRK 276 >gi|149201621|ref|ZP_01878595.1| flagellar MotB protein [Roseovarius sp. TM1035] gi|149144669|gb|EDM32698.1| flagellar MotB protein [Roseovarius sp. TM1035] Length = 383 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 108/367 (29%), Gaps = 60/367 (16%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF-------NPFGKNLMT 78 P +W +AD T+LMAFF+++ + K + Sbjct: 23 PPKGAPAWMATFADIATLLMAFFVLILSFAEFNQPKFKMVAGSLSMAFGVQRQVPVMEQP 82 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 I D P ++ D T+ + + K E + Sbjct: 83 KGTTILDLSFSPSPEMSVTEQMTQDTTETEQPEIQRPVTEEDGKGAAEGEGADAPGQSEA 142 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL-------------------- 178 + S + K + ++ + + + LP Sbjct: 143 REMAEALQEALQSGQVKVESREGEVVMTFDAPDAQSLPGQLTEAAEALQQAAEATGQSTS 202 Query: 179 ---------------------SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 ++ + A + + ++ L + + + V Sbjct: 203 DVMMQGLADNIQEMAEVMQGKAEAETQAGQSARSAAIADAQLQVALQQEIGEGL---VSV 259 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277 E ++I++ + F + E V+ ++ I + GHTD+ P Sbjct: 260 EQREDKVVITVGE---GGAFPSGGADLTDEARDVMARLAFAAMGEASEIVVTGHTDSVPL 316 Query: 278 RN--IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANR 332 RDNW L+ RA S + L SG + +R++ S +D + NR Sbjct: 317 GGASPYRDNWGLAAARASSVVRELSGSGLIEPERLTATS-RGESLPVAENDTAAGRAQNR 375 Query: 333 RIDILVE 339 RI+I + Sbjct: 376 RIEIEIT 382 >gi|27381973|ref|NP_773502.1| flagellar motor protein MotB [Bradyrhizobium japonicum USDA 110] gi|27355143|dbj|BAC52127.1| motB [Bradyrhizobium japonicum USDA 110] Length = 445 Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 117/297 (39%), Gaps = 8/297 (2%) Query: 53 IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 + + ++D K + Y +PF + + + S D + Sbjct: 149 ALTSAEEDGLKGGDAYRDPFDPGYWKLAPQASKDSDRIIESEPKPNAPVRDNATGTGQGE 208 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE- 171 + + + N S S S S + Sbjct: 209 PQARRSKTDDAGGSVAPNADASSASLSPLLPPGPAPAPSPSQSSREGSAQANAQSGAQAS 268 Query: 172 ------NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 P S+ + A ++ ++ L I+ LS + G+L Sbjct: 269 AAAQGRPGDTPKDSEPRDAAQTQQPTVKQLQSAIAEALSD-IKAGAGPAAEVRQVEEGLL 327 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 +S+ D + MF S+ P PE I V+ KIG +L +I +RGHTD P+++ DNW Sbjct: 328 VSLTDDTSFGMFAVGSAEPRPELIRVIDKIGPLLMKRQGMIIVRGHTDNRPYKSETYDNW 387 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 RLS RA AY +L++SGV RI + G+A R K+ +DP + NRRI+IL+ +++ Sbjct: 388 RLSTARAQMAYYMLVRSGVDAQRIEHVEGYADRRPKLQNDPAAAQNRRIEILIREKR 444 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 77/198 (38%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 + + +I++++ A + ++ G WKI YADFMT +MAFFLVMW++NA + D K+ + Sbjct: 2 EEVKQELVIVRRRSAFAEEAHHGGVWKIAYADFMTAMMAFFLVMWLLNALNQDQKQVVAS 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YFNP + + + E ++ D + + Y+ Sbjct: 62 YFNPIKLAENAPAPKGLKDLSKKEPTTFEGQDGRRQPAGPSEERRGDSPTAEKPPFYEEK 121 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + + + N + G D K + + F P K A K Sbjct: 122 VLFRDPYATLAEIANSANQASGQRRAGALTSAEEDGLKGGDAYRDPFDPGYWKLAPQASK 181 Query: 188 RKKRLQDLAKKISSTLSG 205 R+ + K ++ + Sbjct: 182 DSDRIIESEPKPNAPVRD 199 >gi|148254925|ref|YP_001239510.1| putative chemotaxis protein MotB [Bradyrhizobium sp. BTAi1] gi|146407098|gb|ABQ35604.1| putative chemotaxis protein MotB [Bradyrhizobium sp. BTAi1] Length = 276 Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 105/326 (32%), Gaps = 62/326 (19%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + KKK + W + +AD M +L++FF+++ + D++ K + Sbjct: 1 MAKKKRGDAHGGGHG--WFVTFADLMGLLVSFFVMLVAFSTMDNNKLKVVAGSMRDAFGV 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + E + + K + T Sbjct: 59 QSESRYSGIVESDGLPTRPKLKNAAHVSPEETSREPSP---------------------- 96 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + + S A++ + ++ Sbjct: 97 ---------------------EQEERQHTNGAKLKTDRQFALASASLRQALQDMPEMTEI 135 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +K I FE T+ G+ + I+DQ MF S +P T +++K+ Sbjct: 136 SKHIM----------------FEETKQGLNLEIVDQDGRSMFADGSKVPYDRTRRLIEKL 179 Query: 256 GEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + + I GHT A + LS DRA + Q+L + G+ I +SG Sbjct: 180 AAPLKATPLRVQITGHTAAGFVPARSDYGAFDLSADRANAVRQILEREGLPPSHIFAVSG 239 Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340 A + DP +ANRR+ I + Sbjct: 240 KADTQPLFPDDPSLAANRRVTITLMR 265 >gi|260429438|ref|ZP_05783415.1| OmpA/MotB [Citreicella sp. SE45] gi|260420061|gb|EEX13314.1| OmpA/MotB [Citreicella sp. SE45] Length = 291 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 116/343 (33%), Gaps = 55/343 (16%) Query: 1 MNSH--GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATD 58 MN+ N +IIK+K ++ G+WK+ YADF+T +MAFFL+MW++NAT Sbjct: 1 MNNEVVEMAVDSNVAPVIIKRKKVSGGDGHHGGAWKVAYADFVTAMMAFFLLMWLLNATT 60 Query: 59 DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118 + +K + YF+P + G + + + + Sbjct: 61 EKQRKGLADYFSPTIAVSRMSGGGDGTLGGESVFTEAVLPRVGTGATSLNPMAQNRARGS 120 Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178 + Q + ++ + + ++ L + + +E + Sbjct: 121 SDPGQARETGKAEEPGASDEDLKALEDLLMGRGGETMIDDNLMRHIVTRVTDEGLVVELF 180 Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 E + D+ PM Sbjct: 181 ETEDA-------------------------------------------RLFDETGAPM-- 195 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 P + I V T +++ GHT A P +W +S RA Q+ Sbjct: 196 -------PLLRDLAGVIARVSRLVTNPLAVEGHTTAFPIVLARDPSWDVSTRRADDFRQL 248 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 L+ G+ RI +++ A ++ PM++ N R++++ + Sbjct: 249 LLAGGLDRKRIDRVTAHADREPSQSN-PMDARNNRLEVIFLRK 290 >gi|187926231|ref|YP_001892576.1| OmpA/MotB domain protein [Ralstonia pickettii 12J] gi|241665719|ref|YP_002984078.1| flagellar motor protein MotB [Ralstonia pickettii 12D] gi|187727985|gb|ACD29149.1| OmpA/MotB domain protein [Ralstonia pickettii 12J] gi|240867746|gb|ACS65406.1| OmpA/MotB domain protein [Ralstonia pickettii 12D] Length = 315 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 61/335 (18%), Positives = 126/335 (37%), Gaps = 66/335 (19%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + + I+ ++ ++ G+WKI YADF+T +MAFFL+MW++++ ++E Y Sbjct: 3 KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K + G D+ + + S K ++ +V + ++ Sbjct: 63 FRTPLKVALFGGAGSGDQSSILQGSPALKQNMPQPNPSPSPTVQRQRNIRDESD------ 116 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + L L ++ ++ Sbjct: 117 -------------------------------------------DAALNKLKQKIAEMVET 133 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + ++ L + + + ++ + R F +S+ P Sbjct: 134 NPVMSQFKHQL---LIDMTTEGLRIQIVDQQNRPM-------------FANASAEVQPYM 177 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSED 307 +L+++G L IS+ GHTDA+ + NW LS DRA ++ + L+ G+ + Sbjct: 178 RTILRELGTALNDVPNPISLSGHTDATQYATQHGYSNWELSADRANASRRELVAGGMKPE 237 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++S++ G ++ N NRRI I+V + + Sbjct: 238 KVSRVVGLEASVPLDKTNIYNPINRRISIVVLNAR 272 >gi|209885628|ref|YP_002289485.1| OmpA/MotB [Oligotropha carboxidovorans OM5] gi|209873824|gb|ACI93620.1| OmpA/MotB [Oligotropha carboxidovorans OM5] Length = 275 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 105/321 (32%), Gaps = 59/321 (18%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + D W + +AD M ++M+FF+++ + D K + Sbjct: 3 RKKRGDAHAGGHGWFVTFADLMGLMMSFFVMLVAFSNQDQTKLKIVAGSMREA------- 55 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 F QN S + D KN + + Sbjct: 56 ----FGVQNDARYSGVIETDGLPTRPKLKNVDHIPPEEASNTPSPDE------------- 98 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 K + + S A++ + +L+K I Sbjct: 99 -------------------KEMAKLYGARIKTDREFALASASLRQALQDMPEMTELSKHI 139 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 FE T+ G+ + I+DQ MF + S P T ++++K+ L Sbjct: 140 M----------------FEETKNGLNLEIVDQDGRSMFAEGSREPYERTRMLIRKLAAPL 183 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 S I+I GHT A+ D + LS DRA + Q+L G+ I +SG A Sbjct: 184 RQSPLRIAIVGHTSANVPLRPGYDAFDLSADRANAVRQILQNEGLPATHIFSVSGKADTE 243 Query: 320 LKIASDPMNSANRRIDILVED 340 DP SANRR+ I + Sbjct: 244 PLFPDDPTLSANRRVTITLMR 264 >gi|255744684|ref|ZP_05418635.1| Flagellar motor rotation protein MotB [Vibrio cholera CIRS 101] gi|262161183|ref|ZP_06030294.1| Flagellar motor rotation protein MotB [Vibrio cholerae INDRE 91/1] gi|262168686|ref|ZP_06036381.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC27] gi|255737715|gb|EET93109.1| Flagellar motor rotation protein MotB [Vibrio cholera CIRS 101] gi|262022804|gb|EEY41510.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC27] gi|262028933|gb|EEY47586.1| Flagellar motor rotation protein MotB [Vibrio cholerae INDRE 91/1] Length = 294 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 103/304 (33%), Gaps = 31/304 (10%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 M++LM FF+++ + D K I K F QN E K Sbjct: 1 MSLLMCFFVLLLSFSEMDVLKFKQIAGSM-----------KFAFGVQNRLEVKDIPKGTS 49 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 I + + ++ + + + + G Sbjct: 50 IIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDRAGGNQRDSGQLTGG------ 103 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + + ++ ++ A ++++ +A+ I LS + + E Sbjct: 104 ---QSAETSVQDNQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGA---IEVENL 157 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280 I I I ++ F + S+ P+ ++++I E++ + + GHTD + Sbjct: 158 GQQIDIRIREK---GAFPEGSAFLQPKFRPLVRQIAELVKDIPGKVRVTGHTDNQKLDSE 214 Query: 281 -ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 R NW LS RA S Q + K R+ ++ G A + +D NRR++I Sbjct: 215 LYRSNWDLSAQRAVSVAQEMEKVKDFDHLRL-QVRGLADTQPLGPNDTEAQRATNRRVEI 273 Query: 337 LVED 340 + Sbjct: 274 SILQ 277 >gi|75675430|ref|YP_317851.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255] gi|74420300|gb|ABA04499.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255] Length = 276 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 110/326 (33%), Gaps = 62/326 (19%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + KKK + W + +AD M ++M+FF+++ + D+ K + + Sbjct: 1 MAKKKRGDAHGGGHG--WFVTFADLMGLMMSFFVMLVAFSTMDNQKLKIVAGSMRDAFGS 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 E + + K + T + + + + F L+ Sbjct: 59 QTEVRYSGIIESDGLPTRPKLKNAAHVPPDETSTTPTPNEQERFKIAGARLKTDREFALA 118 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 S A++ L +L Sbjct: 119 -------------------------------------------SASLRQALQDMPELTEL 135 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +K I FE T+ G+ + I+DQ MF + S P T ++++++ Sbjct: 136 SKHIM----------------FEETKEGLNLEIVDQDGRSMFAEGSKEPYERTRMLIRRL 179 Query: 256 GEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + IS+ GHT ++ D + LS DRA Q+L + GV I +SG Sbjct: 180 AAPLKATPFRISVTGHTASNFIAMRSDYDGFDLSADRANVVRQILEREGVPAGHIFAVSG 239 Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340 + DP +ANRR+ I + Sbjct: 240 KSDSMPLFPDDPSLAANRRVTITLMR 265 >gi|85715414|ref|ZP_01046396.1| OmpA/MotB [Nitrobacter sp. Nb-311A] gi|85697835|gb|EAQ35710.1| OmpA/MotB [Nitrobacter sp. Nb-311A] Length = 276 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 62/326 (19%), Positives = 108/326 (33%), Gaps = 62/326 (19%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + KKK + W + +AD M ++M+FF+++ + D+ K + + Sbjct: 1 MAKKKRGDAHGGGHG--WFVTFADLMGLMMSFFVMLVAFSTMDNQKLKIVAGSMRDAFGS 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 E + + K + T + + + + F L Sbjct: 59 QTEVRYSGIIESDGLPTRPKLKNAAHVPPDETSTTPTPDEQERFKTAGARLKTDREFAL- 117 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 S A++ L +L Sbjct: 118 ------------------------------------------ASASLRQALQDMPELTEL 135 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +K I FE T+ G+ + I+DQ MF + S P T +++ K+ Sbjct: 136 SKHIM----------------FEETKEGLNLEIVDQDGRSMFAEGSKEPYERTRMLIGKL 179 Query: 256 GEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + ISI GHT ++ D + LS DRA Q+L + G+ I +SG Sbjct: 180 AAPLTATPFRISITGHTASNFVPMRSDYDGFDLSADRANVVRQILEQEGLPPSHIFAVSG 239 Query: 315 FAHHRLKIASDPMNSANRRIDILVED 340 + DP +ANRR+ I + Sbjct: 240 KSDSMPLFPDDPSLAANRRVTITLMR 265 >gi|77463800|ref|YP_353304.1| flagellar MotB protein [Rhodobacter sphaeroides 2.4.1] gi|77388218|gb|ABA79403.1| flagellar MotB protein [Rhodobacter sphaeroides 2.4.1] Length = 366 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 58/340 (17%), Positives = 108/340 (31%), Gaps = 31/340 (9%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM----TASK 81 P +W +AD T LMAFF+++ D+ + + T+ Sbjct: 27 PPPGAPAWLATFADIATNLMAFFVLILGFAKFDEPSFSKMAGAMRETFGFHSIRDATSGN 86 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVD-----------------LKIGSTNQKKQY 124 + D P + D D +++ D L++ S + Sbjct: 87 TMIDFGLPTADPDGAQPDEKSDTGGSEDGGDAAERVAEALKKALEDGKLQVRSDEGEVVI 146 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + + + S + + + + + K+ Sbjct: 147 ELSGEDGRQQAQSLARALAETAGLGPLPEPQTTAQPRPEPKAGPAGPGEGTGAPPGPPAG 206 Query: 185 AMKRKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 Q + ++ + + L + V E T + +S+ F S Sbjct: 207 GDTGAALRQSVRAELDALRLRNALDREVAEGLVKVEQTDGKVFVSLG---AGGSFPSGSD 263 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 P+ V+ +I E + I++ GHTD P A DN L+ RA S + L+ Sbjct: 264 DLTPDARAVMARIAEATRNPERTITVTGHTDNVPVSGGAFRDNIALAAGRAASVVRELVA 323 Query: 302 SG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 SG V RI+ +S + + NRRI+I + Sbjct: 324 SGSVDPGRITAVS-RGEFDPVADNATEEGRAQNRRIEIEI 362 >gi|126462636|ref|YP_001043750.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126104300|gb|ABN76978.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 366 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 58/340 (17%), Positives = 109/340 (32%), Gaps = 31/340 (9%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM----TASK 81 P +W +AD T LMAFF+++ D+ + + T+ Sbjct: 27 PPPGAPAWLATFADIATNLMAFFVLILGFAKFDEPSFSKMAGAMRETFGFHSIRDATSGN 86 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVD-----------------LKIGSTNQKKQY 124 + D P + D D +++ D L++ S + Sbjct: 87 TMIDFGLPTADPDGAQPDEKSDTGGSEDGGDAAERVAEALKKALEDGKLQVRSDEGEVVI 146 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + + + S + + + + + K+ + Sbjct: 147 ELSGEDGRQQAQSLARALAETAGLGPLPEPQTTAQPRPEPKAGPAGPGEGTGAPPGPPVG 206 Query: 185 AMKRKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 Q + ++ + + L + V E T + +S+ F S Sbjct: 207 GDTGAALRQSVRAELDALRLRNALDREVAEGLVKVEQTDGKVFVSLG---AGGSFPSGSD 263 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 P+ V+ +I E + I++ GHTD P A DN L+ RA S + L+ Sbjct: 264 DLTPDARAVMARIAEATRNPERTITVTGHTDNVPVSGGAFRDNIALAAGRAASVVRELVA 323 Query: 302 SG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 SG V RI+ +S + + NRRI+I + Sbjct: 324 SGSVDPGRITAVS-RGEFDPVADNATEEGRAQNRRIEIEI 362 >gi|311105916|ref|YP_003978769.1| motility protein B 1 [Achromobacter xylosoxidans A8] gi|310760605|gb|ADP16054.1| motility protein B 1 [Achromobacter xylosoxidans A8] Length = 330 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 71/332 (21%), Positives = 123/332 (37%), Gaps = 65/332 (19%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 N+ ++I++K ++ GSWKI YADF+T +MAFFLVMW+I+ + K I +YF Sbjct: 5 NNHRVVIRRKKGGHGGGHHGGSWKIAYADFITAMMAFFLVMWLISIVPREELKGIAEYFR 64 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + + E + + + D + + Sbjct: 65 MPLRVAIAGGPSSSAETSAVPGGGSDPLRSEGDVRRAQGN-------------------- 104 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + E + L L K ++ Sbjct: 105 ---------------------------RVEAQPMGDAERREQHRLENLKKRLENVIETSP 137 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L+ ++ L L + + ++ R F + P Sbjct: 138 VLKSFRPQL---LIDLTTEGLRIQIIDNQNRPM-------------FATGRADVQPYMRD 181 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+++G VL +SI GHTDAS + A NW LS DRA ++ Q L+ G++E + Sbjct: 182 ILRELGPVLNELPNKVSISGHTDASQYARGERAYSNWELSADRANASRQELVAGGMNESK 241 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + +I G + + DP + NRRI ++V + Sbjct: 242 VLRIQGLSSSMSLVKDDPYAAVNRRISLVVLN 273 >gi|332669204|ref|YP_004452212.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484] gi|332338242|gb|AEE44825.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484] Length = 301 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 106/320 (33%), Gaps = 52/320 (16%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83 ++ N W + Y+D +TVLMA F+V++ I+ D + A+ + T+ + Sbjct: 15 EEEHVNHERWLVSYSDMITVLMALFIVLFAISQVDQEKYIALRDSLAAGFMDTTTSPSVL 74 Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 + S + D S D +G + + + Sbjct: 75 DGTDGTLDGKSTQSENTPADGTAGMVSADDGLGQQAAVPPVPATPTTDASVDPATLAAAQ 134 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 + L +L +I+ L Sbjct: 135 AEAA-------------------------------------------HLTELRDRIAQAL 151 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + + + V G+++ ++ F + + VL ++ Sbjct: 152 AA---NGLDQAVRMRIDERGLVLGLVADD--VFFAPARAELTDTARRVLDVASPLIVGIG 206 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322 E +S+ GH + P NW LS DRA + L++ G+ RI + GF R + Sbjct: 207 ENVSVEGHANVIPVSGRYPTNWELSADRATQVLRHLVEVDGMPGPRIMAV-GFGDTRPLV 265 Query: 323 ASDPMN--SANRRIDILVED 340 A D +ANRR+D+++ Sbjct: 266 AGDSPEALAANRRVDLVILS 285 >gi|260364262|ref|ZP_05776961.1| flagellar motor protein MotB [Vibrio parahaemolyticus K5030] gi|308113750|gb|EFO51290.1| flagellar motor protein MotB [Vibrio parahaemolyticus K5030] Length = 278 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 101/300 (33%), Gaps = 29/300 (9%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 D P L W +AD M++LM FF+++ + D K I Sbjct: 6 NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 55 KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 K T + ++ ++ + + + ++ L + I Sbjct: 115 AGGTKRDEG---------KLTGGQSPETSTQSNQSAESDMQQQQSEEMSQEMETLMESIK 165 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + + E I+I + ++ F + S+ P+ ++++I E++ Sbjct: 166 KALEREIEQGA---IEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 219 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 ++ I GHTD + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 220 DVPGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 278 >gi|221639652|ref|YP_002525914.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131] gi|221160433|gb|ACM01413.1| OmpA/MotB domain protein [Rhodobacter sphaeroides KD131] Length = 366 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 58/340 (17%), Positives = 109/340 (32%), Gaps = 31/340 (9%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM----TASK 81 P +W +AD T LMAFF+++ D+ + + T+ Sbjct: 27 PPPGAPAWLATFADIATNLMAFFVLILGFAKFDEPSFSKMAGAMRETFGFHSIRDATSGN 86 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVD-----------------LKIGSTNQKKQY 124 + D P + D D +++ D L++ S + Sbjct: 87 TMIDFGLPTADPDGAQPDEKSDTGGSEDGGDAAERVAEALKKALEDGKLQVRSDEGEVVI 146 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + + + S + + + + + K+ + Sbjct: 147 ELSGEDGRQQAQSLARALAETAGLGPLPEPQTTSQPRPEPKAGPAGPGEGTGAPPGPPVG 206 Query: 185 AMKRKKRLQDLAKKISST--LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 Q + ++ + + L + V E T + +S+ F S Sbjct: 207 GDTGAALRQSVRAELDAIRLRNALDREVAEGLVKVEQTDGKVFVSLG---AGGSFPSGSD 263 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 P+ V+ +I E + I++ GHTD P A DN L+ RA S + L+ Sbjct: 264 DLTPDARAVMARIAEATRNPERTITVTGHTDNVPVSGGAFRDNIALAAGRAASVVRELVA 323 Query: 302 SG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 SG V RI+ +S + + NRRI+I + Sbjct: 324 SGSVDPGRITAVS-RGEFDPVADNATEEGRAQNRRIEIEI 362 >gi|304405743|ref|ZP_07387401.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9] gi|304344986|gb|EFM10822.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9] Length = 278 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 123/328 (37%), Gaps = 69/328 (21%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 +++ + + SW I YAD MT+L+A F+V++ +++ D + + FN Sbjct: 3 RRRKHEEHEEHADESWLIPYADLMTLLLALFIVLFSMSSVDAKRFDEMSRAFNMALD--- 59 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 G+ D + L++ Sbjct: 60 -GGVGVLDNFRSVQTGKD--------------------------------------LNDE 80 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 ++ E K + + + D + + K+E ++ L+ L K Sbjct: 81 KEREKSKQEQKQQTVTKTQQQQQQDDLEKLRKKE-----------------QEDLEKLKK 123 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 ++ + + + + + ++ +LI+I D ++ SS PE+ + Q I + Sbjct: 124 QLDQYIKSM---GLTTQLDTKLNQSQLLITISDN---ALYASGSSAVKPESRKLGQAIAK 177 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L I + GHTD P N DNW LS DRA + Q+L+ S + ++ +G+ Sbjct: 178 MLKQYPGYEIIVAGHTDNQPISNSDFRDNWDLSSDRALNFMQILLASAQLDPKLISSTGY 237 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDR 341 R ++ NRR+++ + + Sbjct: 238 GEFRPLTSNATEAGRSKNRRVEVSLMRK 265 >gi|332558675|ref|ZP_08412997.1| MotB [Rhodobacter sphaeroides WS8N] gi|332276387|gb|EGJ21702.1| MotB [Rhodobacter sphaeroides WS8N] Length = 366 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 58/340 (17%), Positives = 109/340 (32%), Gaps = 31/340 (9%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM----TASK 81 P +W +AD T LMAFF+++ D+ + + T+ Sbjct: 27 PPPGAPAWLATFADIATNLMAFFVLILGFAKFDEPSFSKMAGAMRETFGFHSIRDATSGN 86 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVD-----------------LKIGSTNQKKQY 124 + D P + D D +++ D L++ S + Sbjct: 87 TMIDFGLPTADPDGAQPDEKSDTGGSEDGGDAAERVAEALKKALEDGKLQVRSDEGEVVI 146 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + + + S + + + + + K+ + Sbjct: 147 ELSGEDGRQQAQSLARALAETAGLGPLPEPQTTSQPRPEPKAGPAGPGEGTGAPPGPPVG 206 Query: 185 AMKRKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 Q + ++ + + L + V E T + +S+ F S Sbjct: 207 GDTGAALRQSVRAELDALRLRNALDREVAEGLVKVEQTDGKVFVSLG---AGGSFPSGSD 263 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 P+ V+ +I E + I++ GHTD P A DN L+ RA S + L+ Sbjct: 264 DLTPDARAVMARIAEATRNPERTITVTGHTDNVPVSGGAFRDNIALAAGRAASVVRELVA 323 Query: 302 SG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 SG V RI+ +S + + NRRI+I + Sbjct: 324 SGSVDPGRITAVS-RGEFDPVADNATEEGRAQNRRIEIEI 362 >gi|254501723|ref|ZP_05113874.1| OmpA family protein [Labrenzia alexandrii DFL-11] gi|222437794|gb|EEE44473.1| OmpA family protein [Labrenzia alexandrii DFL-11] Length = 284 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 108/323 (33%), Gaps = 51/323 (15%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 W + +AD M++L+ FF+++ + D + + + Sbjct: 3 RKKPQGGGGAPDWLVTFADLMSLLVCFFVLIISFSIQDKEKLQVVAGSMREAF------- 55 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 + ++ + +++ + + + L + Sbjct: 56 ---------------------GVKDSSRKTGIIEVEGIPIRDYMKDISQVEQELDSDFAQ 94 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 E + + E ++EK + A + + +++ I Sbjct: 95 ERHEKRRKQGPEANTHDTMEAEIEKPRQ------FATAAASLRQAWQEMPEITEVSTNI- 147 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + E T G+ I ++DQ MF + S P T ++ ++ VL+ Sbjct: 148 ---------------ILEETEEGLNIMLVDQDGRSMFREGSKYPYETTRRLIAQMAPVLS 192 Query: 261 HSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 I I GHT A W LS +RA A Q+L + GV + + + G + Sbjct: 193 RMPNRIEITGHTTAGAATVDPSYTGWDLSTERANVARQILSEYGVPDGQFYSVVGKSDTE 252 Query: 320 LKIASDPMNSANRRIDILVEDRQ 342 +DP +ANRR+ IL+ + Sbjct: 253 PLFPNDPYLAANRRVGILLMAEE 275 >gi|330830039|ref|YP_004392991.1| chemotaxis protein MotB [Aeromonas veronii B565] gi|328805175|gb|AEB50374.1| Chemotaxis protein MotB [Aeromonas veronii B565] Length = 291 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 65/327 (19%), Positives = 121/327 (37%), Gaps = 53/327 (16%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + P N W + YADFMT+L A F+V++ + + Q F Sbjct: 3 KKKKAEAPENHERWLVSYADFMTLLFALFVVLYSFAMAKQSETRVLIQGF---------- 52 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 ++ + + S ++ + +T + + + ++ S Sbjct: 53 ------IESLGKIGLISPPAGSPLMQGGTGILEPESKTTPSSPKEETVLEKDAPMAASDP 106 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + S K+ + E + + ++K Q L +I Sbjct: 107 FNETIGASEKPSATEAWPHKTQEQEW------------------VQVTKQKLEQQLKAQI 148 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S K + E + ++I I ++ +F S+ P+ I ++ KI +L Sbjct: 149 ES-----------KDLEVEQLGSQLVIRIGEK---ALFPADSAFLQPQFIPLVNKIAGIL 194 Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAH 317 A+ + + GHTD S R+NW LS+ RA S Q +L + R+ G A Sbjct: 195 ANIPGQVVVTGHTDNSQAPVELYRNNWELSVLRASSIVQTMLTNPQLDARRVIA-QGVAD 253 Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342 + + A+D ANRR+DI + + Sbjct: 254 TQPRFANDTPEHRQANRRVDITLSQGK 280 >gi|148554180|ref|YP_001261762.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1] gi|148499370|gb|ABQ67624.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1] Length = 334 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 129/336 (38%), Gaps = 57/336 (16%) Query: 4 HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63 +N+ + IIIKK VA ++ G+WK+ YADF+T +MAFFL+MWI+ AT++ +K Sbjct: 7 KRGRNEPEPRPIIIKKIVAEGHGGHHGGAWKVAYADFVTAMMAFFLLMWILGATNEKQRK 66 Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 I YF P S G ++ + +K+ K S +K Sbjct: 67 GIADYFTPTMVQFKEKSAGSNGIFGGESVVDKDNYPHRAAQTGSKSISIPKDASGGEK-- 124 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 D S + L Sbjct: 125 --------------------------------------DGAGSAKSRDRVAFQKLKLLLQ 146 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 M RL + V TR G+ I ++DQ + MF + Sbjct: 147 AKMAADPRLAKMMS----------------NVRMVETREGLRIDLVDQADFAMFRSGTDE 190 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKS 302 E +++++ EV + + +RGHTDA P+ + +NW LS RA + + L Sbjct: 191 LSSEARALMKQVAEVTNFADNSVIVRGHTDAMPYSKGRTVNNWTLSAARAEATRRALSDF 250 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 GV+ R ++I G A +A DP + NRR+ I + Sbjct: 251 GVANTRFARIEGVADREPYVAGDPYDPRNRRMSITL 286 >gi|254462550|ref|ZP_05075966.1| flagellar MotB protein [Rhodobacterales bacterium HTCC2083] gi|206679139|gb|EDZ43626.1| flagellar MotB protein [Rhodobacteraceae bacterium HTCC2083] Length = 411 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 50/391 (12%), Positives = 108/391 (27%), Gaps = 74/391 (18%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--------FGKNLM 77 P +W +AD +LMAFF+++ + K I Sbjct: 21 PPVGAPAWMATFADLAILLMAFFVLILSFAEMNIPKFKQISGSLRDSFGIQRIVPVVEQP 80 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI-----------GSTNQKKQYQR 126 + + +P S + + + V + +++ ++ Sbjct: 81 EGTTILELNFSPSPSPSITEEATQETTEVREPEVKVPTDNRDNDGKDNLNESDENREGLG 140 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 +N +E ++ + + D + ++N P EK + Sbjct: 141 GKNADGAGDGKSDAEKFAEAIEKIGASVNVSAELVDGKVAVNLNAEQSTPEEMIEKFQRV 200 Query: 187 KRK-------------------------------------------KRLQDLAKKISSTL 203 + + +++ ++ L Sbjct: 201 AQALEIAELATGNSENEVLYAGLDKDLSQLIGMVSVIQDQKNAIDGESIEEDKERAQKAL 260 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSSIPLPETIVVLQKI 255 E L+++ + F S+ ++ ++ Sbjct: 261 DKAREAEAKLKANLENEIENGLVTVERREGKVFVNLGSGGAFPSGSASLTGAAQAIVAEL 320 Query: 256 GEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + + GHTD P + RDNW L+ RA S Q + + +R + Sbjct: 321 AATTNDPDSSVVVAGHTDNVPIGFGALYRDNWDLAAARAASVVQEIEGLNLVPEREMSAT 380 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + R +D NRRI+I +E +Q Sbjct: 381 SYGEARPIADNDTPEGREKNRRIEIEIEFKQ 411 >gi|329928770|ref|ZP_08282619.1| putative chemotaxis protein MotB [Paenibacillus sp. HGF5] gi|328937551|gb|EGG33969.1| putative chemotaxis protein MotB [Paenibacillus sp. HGF5] Length = 271 Score = 147 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 97/320 (30%), Gaps = 72/320 (22%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 W I YAD +T+L+ FF+VM+ ++ D + K + Q ++ Sbjct: 15 EGEQRDRWMITYADLITLLLIFFVVMYAMSRLDTEKYKLVTQSLQATFQS---------- 64 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 + E S + H K Q +Q+ E Sbjct: 65 GDSILEMGSGITGTADTENHKNPPPKPAADEEGEDKDTGQEPLTERELAFRAQEEE---- 120 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 LA + Sbjct: 121 -------------------------------------------------LANFMGLIQQY 131 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + + + + + GI I++ D+ +FD + P VL K+ + Sbjct: 132 VKDNQLEEDIFISDEPQGIAITLSDR---FLFDVGKAELKPGAAPVLGKLASLFGDLNTT 188 Query: 266 ISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKI 322 +SI GHTD P + +DNW LS RA S + L S + + +G+A R Sbjct: 189 VSIEGHTDNVPIGRYSSYKDNWELSGARAMSVLRFFLEHSKLDPGGF-QYAGYADTRPAA 247 Query: 323 ASDPMNS--ANRRIDILVED 340 + NRR++I V Sbjct: 248 DNATAEGKQKNRRVEITVLR 267 >gi|126734128|ref|ZP_01749875.1| putative chemotaxis MotB protein [Roseobacter sp. CCS2] gi|126716994|gb|EBA13858.1| putative chemotaxis MotB protein [Roseobacter sp. CCS2] Length = 278 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 58/332 (17%), Positives = 109/332 (32%), Gaps = 59/332 (17%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 ++ IIK+K I ++ G+WK+ YADF+T +MAFF++MW++NAT + +K + YF Sbjct: 4 GSNAPTIIKRKKVIAGGGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEQQRKGLADYF 63 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 P N IG + + Sbjct: 64 APTI------PINRVSGGGSGAFGGDNIFTEQTLAQSGTGISQPTIGMDPVQSETDAEAA 117 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + + + E Sbjct: 118 AAVAAQVAALRDIEAVLMGQGGE------------------------------------- 140 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +++D ++ ++ T G++I I D +F +++P P T Sbjct: 141 ---------------SMLSDQALRHIITRLTDEGLVIEIYDLPEVTLFVDDTTVPNPVTA 185 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + + + ++++GH A I W LS RA +L G+ RI Sbjct: 186 EIATIMARMFTTVSNDVAVKGHLSAKSPLQIDNPVWELSTGRAVQMRLMLQSGGLDPMRI 245 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 + SG + N RI++++ Sbjct: 246 VRQSGAGDREPAVRDAT-APRNNRIEVILLRS 276 >gi|84514795|ref|ZP_01002158.1| flagellar MotB protein [Loktanella vestfoldensis SKA53] gi|84510954|gb|EAQ07408.1| flagellar MotB protein [Loktanella vestfoldensis SKA53] Length = 411 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 109/393 (27%), Gaps = 76/393 (19%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--------FGKNLM 77 P +W +AD T+LMAFF+++ + K I Sbjct: 19 PPVGAPAWMATFADLATLLMAFFVLLLSFAEMNVPKFKQISGSLKDSFGVQKIIPVVEQP 78 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI-------------GSTNQKKQY 124 + + +P S + I + + + G T+ Sbjct: 79 KGTTVLELNFSPSPSPSVTEEATQETTEIKEPELKIPTDNRDMDGEDKQLEGETDADGLG 138 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 NI N +E +L + + D + +I+ P EK Sbjct: 139 GETAENIADNENMSDAEKLAAALEQIGTAVNIEAEIVDGKVAIDMNAEDASPQELIEKFQ 198 Query: 185 AMKRKKRLQDLAKKISST--------------------------------LSGLVADNIV 212 + + + LA + L ++ Sbjct: 199 RVGQAIEIAGLATGKAEQEILFGGLDETLNDLISMVSEIQRQQQESGGATLDEALSQMAR 258 Query: 213 KGVLFETTRTGILISIIDQRNTPM-------------------FDKSSSIPLPETIVVLQ 253 + ++ D+ + + F S+ + ++ Sbjct: 259 ATEKALEAEAQLRANLQDEIDQGLVTVEQRDGKVFVNLGAGGAFPSGSADLTLQARGIID 318 Query: 254 KIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++ V T + + GHTD P + RDNW L+ RA S Q + S + R Sbjct: 319 ELAAVTVDPTSKVVVSGHTDNVPISFGALYRDNWDLAAARAASVVQEIEASIPAPGREMS 378 Query: 312 ISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 F + + NRRI++ +E Q Sbjct: 379 AISFGETKPVADNATAEGRERNRRIELEIEFEQ 411 >gi|309778972|ref|ZP_07673742.1| bacterial outer membrane protein [Ralstonia sp. 5_7_47FAA] gi|308922319|gb|EFP67946.1| bacterial outer membrane protein [Ralstonia sp. 5_7_47FAA] Length = 315 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 61/335 (18%), Positives = 126/335 (37%), Gaps = 66/335 (19%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + + I+ ++ ++ G+WKI YADF+T +MAFFL+MW++++ ++E Y Sbjct: 3 KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F K + G D+ + + S K ++ +V + ++ Sbjct: 63 FRTPLKVALFGGAGSGDQSSILQGSPALKQNMPQPNPSPSPTVQRQRNIRDESD------ 116 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + L L ++ ++ Sbjct: 117 -------------------------------------------DAALNKLKQKIAEMVET 133 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + ++ L + + + ++ + R F +S+ P Sbjct: 134 NPVMSQFKHQL---LIDMTTEGLRIQIVDQQNRPM-------------FANASAEVQPYM 177 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSED 307 +L+++G L IS+ GHTDA+ + NW LS DRA ++ + L+ G+ + Sbjct: 178 RTILRELGSALNDVPNPISLSGHTDATQYATQHGYSNWELSADRANASRRELVAGGMKPE 237 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++S++ G ++ N NRRI I+V + + Sbjct: 238 KVSRVVGLEASVPLDKANIYNPINRRISIVVLNAR 272 >gi|261409603|ref|YP_003245844.1| OmpA/MotB domain-containing protein [Paenibacillus sp. Y412MC10] gi|261286066|gb|ACX68037.1| OmpA/MotB domain protein [Paenibacillus sp. Y412MC10] Length = 271 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 97/320 (30%), Gaps = 72/320 (22%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 W I YAD +T+L+ FF+VM+ ++ D + K + Q ++ Sbjct: 15 EGEQRDRWMITYADLITLLLIFFVVMYAMSRLDTEKYKLVTQSLQATFQS---------- 64 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 + E S + H K Q +Q+ E Sbjct: 65 GDSILEMGSGITGTADTENHKNPPPKPAADEEGEDKDNGQEPLTERELAFRAQEEE---- 120 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 LA + Sbjct: 121 -------------------------------------------------LANFMGLIQQY 131 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + + + + + GI I++ D+ +FD + P VL K+ + Sbjct: 132 VKDNQLEEDIFISDEPQGIAITLSDR---FLFDVGKAELKPGAAPVLGKLASLFGDLNTT 188 Query: 266 ISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKI 322 +SI GHTD P + +DNW LS RA S + L S + + +G+A R Sbjct: 189 VSIEGHTDNVPIGRYSSYKDNWELSGARAMSVLRFFLEHSKLDPAGF-QYAGYADTRPAA 247 Query: 323 ASDPMNS--ANRRIDILVED 340 + NRR++I V Sbjct: 248 DNATAEGKQKNRRVEITVLR 267 >gi|146277438|ref|YP_001167597.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145555679|gb|ABP70292.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 367 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 57/344 (16%), Positives = 102/344 (29%), Gaps = 37/344 (10%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN--------------- 70 P +W +AD T LMAFF+++ D+ + + Sbjct: 28 PPPGAPAWLATFADIATNLMAFFVLILGFAKFDEPSFSKMAGAMRETFGFHSIRDATSGN 87 Query: 71 -------PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 P D E ++ +L++ S + Sbjct: 88 TVIELGMPPADPDGLHPDERSDMGGSEEPGGDAPERVAEALREALEQGELQVRSEDGSVV 147 Query: 124 YQRL----ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + + + PP+ Sbjct: 148 IELPGKQAAQALAQALAEAAGVGTGPLPEPQTTAQPRPEPQAGPAGPGEGTGAPAGPPVG 207 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 E+ A+++ R + ++ + L VA+ + V E + +S+ F Sbjct: 208 GEQGAALRKSVRAELDTLRLRNALDREVAEGL---VKVEQMDGKVFVSLG---AGGSFTS 261 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQV 298 S + + V+ +I E H I++ GHTD P RDN L+ RA S + Sbjct: 262 GSDVLSEDARAVMSRIAEATQHPERTITVTGHTDNVPVAGGAFRDNIALAAGRAASVVRE 321 Query: 299 LMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ GV RI+ +S + NRRI+I + Sbjct: 322 LVATGGVDPGRITAVS-RGEFDPVADNATEAGRTQNRRIEIEIT 364 >gi|188579878|ref|YP_001923323.1| OmpA/MotB domain protein [Methylobacterium populi BJ001] gi|179343376|gb|ACB78788.1| OmpA/MotB domain protein [Methylobacterium populi BJ001] Length = 470 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 2/263 (0%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + +++P + Q+ + + S + + + R +++ Sbjct: 207 PSKAKEAQKESPKATARQSLHEAMRQAGVKLASAEPMPLEAPKSVEPARPVEPTKPAADA 266 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +E + L K+ + P ++ L L Sbjct: 267 VPETGAPEIKALPTEGKPTQPEPQRLAKA--EVPAVKEPAAGADQPAKAAETAALSALKA 324 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 +I+ + L + T G+LISI D+ N MF S+ P P+ + L++I + Sbjct: 325 EIARAVPSLPNSAPAPHLEVRRTGEGVLISITDEINFSMFGIGSAEPTPKVVKALERIAK 384 Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 +L I +RGHTD PFR+ DNWRLS RA A +L++ G+ E RI +I G+A Sbjct: 385 ILNSRPGRIVVRGHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIERIEGYAD 444 Query: 318 HRLKIASDPMNSANRRIDILVED 340 + +IA+DP + NRRI+IL+ Sbjct: 445 RQPRIAADPKAAENRRIEILLRG 467 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 68/196 (34%), Gaps = 15/196 (7%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + + IIIK+ + ++ G+WKI ADFMT +MA FLVMW+IN+T + K+ I +Y Sbjct: 3 EHAHEIIIIKRH-GDHEDGHHGGAWKIALADFMTAMMALFLVMWLINSTSKEQKQTIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FNP +T + ++ D + D ++ ++ + Sbjct: 62 FNPVKLAEVTHDRKGVNDPQDTPNDPAPSGKGKGDGGNAEGKADAAGAPGSRARESALFQ 121 Query: 129 NNIFYLSNSQQSEHCK--------------NSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 + L+ E G+D + + + Sbjct: 122 DPYAVLAKLAAEAEAGPEAASADAAALEAGQPGVAGGETGRDPFDPLYWQVAALPRQRTD 181 Query: 175 LPPLSKEKILAMKRKK 190 P A + Sbjct: 182 NPGALDTVAAAPAEAR 197 >gi|170741408|ref|YP_001770063.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46] gi|168195682|gb|ACA17629.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46] Length = 441 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 1/274 (0%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F+P + + + P ++ + + + + + G K+ L Sbjct: 168 FDPLYWQVAPLPQARSETPGPINTVAKTPSRVDARAALPNAAREGRTGLDLVPKEIADLL 227 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 +++ + ++ E + + + P+ K Sbjct: 228 KPPGAKPERTEAKPAEAKPAEAKPAEAKPAEAKPAEAKPAEVKPAAVAPVDA-KAAEPGE 286 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 L +L ++ + L V T G LISI D+ N MF+ S+ P + Sbjct: 287 NAALAELKAEVLKAVQPLATGAPAPKVEVRRTGEGTLISITDELNFSMFNVGSAEPQAKV 346 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + L++I +VL+ I +RGHTDA PF++ + DNWRLS RA A +L++ GV+E R Sbjct: 347 VKALERIAKVLSSRPGQIVLRGHTDARPFKSESYDNWRLSSARAQMAAYMLIRGGVAERR 406 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 I +I G A + + SDPM + NRRI+IL+ ++ Sbjct: 407 IVRIEGHADRQPRNPSDPMAAENRRIEILLREKP 440 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 1/182 (0%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + III ++ D+ ++ +WKI ADFMT +M+ FLV+W++N+T +TK AI YF Sbjct: 3 DEAHEIIIVRRRGDDEDGHHSAAWKIALADFMTAMMSLFLVLWLVNSTSKETKSAIADYF 62 Query: 70 NPFGKNLMTAS-KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 NP M+ KG+ D N P S + K GS ++ K+ + Sbjct: 63 NPIRLAEMSPEKKGLRDPTNAPSDSGEPGKTGESKGGEGKGKDSSTSGSASRAKEAALFQ 122 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + L+ + S + + + F P + L R Sbjct: 123 DPYAVLAKLAAEADAERPGDASSADAVTVQEGKPGVTGGEAARDPFDPLYWQVAPLPQAR 182 Query: 189 KK 190 + Sbjct: 183 SE 184 >gi|256833230|ref|YP_003161957.1| OmpA/MotB domain-containing protein [Jonesia denitrificans DSM 20603] gi|256686761|gb|ACV09654.1| OmpA/MotB domain protein [Jonesia denitrificans DSM 20603] Length = 305 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 100/327 (30%), Gaps = 55/327 (16%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K ++ N W + YAD +TVL+ F+V++ ++ D + + Sbjct: 8 RKKGHEEEHANHERWLVSYADMLTVLVGLFIVLYAMSQVDQAKFEQLA------------ 55 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + + Sbjct: 56 ------------------------------------ASLSVSFGGSGSSILSDGSSIIDA 79 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + S+ E ++ + + + + + + ++L Sbjct: 80 NTAITPTSVEPPDEFLAAALRNDNSGSDEDSGQAGDAEEEAIDPKDMAAAQAEYENLQSL 139 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + L + V + G+++ ++ F ++ T V+ + Sbjct: 140 ADRIDAALRKRGLEGSVEYRINERGLIVGLVSDE--LFFQADTARLTKTTERVVDTTARI 197 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA-YQVLMKSGVSEDRISKISGFAH 317 L +SI GH ++ N + NW LS DRA + + K +S RI+ + GF Sbjct: 198 LRELDNELSIEGHANSLQSVN-YKSNWELSSDRATQVLRRYVEKGKISGTRIAAV-GFGD 255 Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342 R +D NRR+DI++ Q Sbjct: 256 TRPLADNDTKRGLKINRRVDIVILSSQ 282 >gi|86136711|ref|ZP_01055289.1| chemotaxis protein MotB [Roseobacter sp. MED193] gi|85826035|gb|EAQ46232.1| chemotaxis protein MotB [Roseobacter sp. MED193] Length = 277 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 67/332 (20%), Positives = 123/332 (37%), Gaps = 59/332 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 Q IIIKKK ++ G+WK+ YADF+T +MAFFL+MW++NAT + +K + Y Sbjct: 4 QNGLAPIIIKKKKVSGGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGLADY 63 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F+P P R S + + + + G+ Sbjct: 64 FSP---------------SIPLSRISGGGNGAFQGDSMFTEDIQPQSGT----------- 97 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + ++ E G + + + E + + Sbjct: 98 --------GASDINPMDAQKAQGETGVSDAEKAEEDSKFRAIEEQLQGRGGESMVSVE-- 147 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + ++ T G+++ + + +F+ + P P Sbjct: 148 ----------------------MSRHIITRVTDEGLIVELFETDGVSLFEAGGAEPTPLF 185 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +++ + V A T I+I GH + P W +S RA A +L G+ R Sbjct: 186 RDLVRMVARVSASVTNDIAISGHIQSHPVVLAQNPVWEMSHARANVARTLLESGGMKSSR 245 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 I +I+G A +L + + PM N R++I++ Sbjct: 246 IHRITGHADRKLAVTN-PMAVRNNRVEIILLR 276 >gi|254487666|ref|ZP_05100871.1| chemotaxis protein MotB [Roseobacter sp. GAI101] gi|214044535|gb|EEB85173.1| chemotaxis protein MotB [Roseobacter sp. GAI101] Length = 280 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 65/336 (19%), Positives = 119/336 (35%), Gaps = 57/336 (16%) Query: 5 GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 N +IIK+K + ++ G+WK+ YADF+T +MAFF++MW++NAT + +K Sbjct: 2 EMAAHANAAPVIIKRKKVVKGGGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEQQRKG 61 Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + YF P I+ + K Sbjct: 62 LADYFTPTIA-----------------------INRISGGGDGLFGGESIFTEMTLPKNG 98 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + + + + + + D E +L K D + E+ + +++ I Sbjct: 99 TGATSPMTPVEGQESGDVGAGTNGPDEEGNAELFKVVDAQLMGRGGESMVMDNIARHVIT 158 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + + +L D + P+F P Sbjct: 159 RQTEEGMVIEL---------------------------------FDVEDVPLFKNGGDQP 185 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 +L+ I + T I++ H ++P + W LS R +L K GV Sbjct: 186 TQMLRELLEVIVDASKIVTNKIAVAAHVRSNPIVAVENPVWDLSAKRGTQTRILLEKLGV 245 Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 RI +++GFA + A D M+ N R++I++ Sbjct: 246 KPARIERVTGFADRKP-AAIDTMDVRNNRVEIILLR 280 >gi|269796387|ref|YP_003315842.1| flagellar motor protein [Sanguibacter keddieii DSM 10542] gi|269098572|gb|ACZ23008.1| flagellar motor protein [Sanguibacter keddieii DSM 10542] Length = 295 Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 107/322 (33%), Gaps = 61/322 (18%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83 ++ + W + YAD MTVL+A F+V++ I+ D+ + Q Sbjct: 15 EEEHEDSERWLVSYADMMTVLVALFIVLYAISQVDEVKYDQLRQSLAAGF---------- 64 Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 N+ + I S + + Sbjct: 65 -------------------------NAPQVSILSDGAGVLTDNPTEAVVPAVDKIIPSTV 99 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 S + D + Y + +LA+KI + L Sbjct: 100 DESTSGDGGDSTGAGDAASPADIAAARVEY----------------QSFAELAEKIDTAL 143 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + V F G++I +I F S++ P + V+ + + Sbjct: 144 AAGGMEG---VVQFRIDERGLVIGMITDE--VFFASESAVLTPTSQAVVDTMTPFMLPLP 198 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 ISI GH D+ P NW LS DRA + ++++ G+ RIS + G+ R Sbjct: 199 NEISIEGHADSVPTA-RYASNWELSSDRATQVLRRMVEADGMPPTRISAV-GYGDSRPLQ 256 Query: 323 ASDPMNS--ANRRIDILVEDRQ 342 ++ ANRR+D++V Q Sbjct: 257 PNETAEGLTANRRVDLVVLSDQ 278 >gi|307944455|ref|ZP_07659795.1| OmpA/MotB [Roseibium sp. TrichSKD4] gi|307772204|gb|EFO31425.1| OmpA/MotB [Roseibium sp. TrichSKD4] Length = 284 Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 113/312 (36%), Gaps = 51/312 (16%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 W + +AD M++L+ FF+++ + D + + + Sbjct: 12 APEWLVTFADLMSLLVCFFVLIISFSIQDKEKLQVVAGSM-------------------- 51 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + + ++ + +++ ++ + + + + E + Sbjct: 52 --------AEAFGVKENSRKTGVIEVEGIPIRQYMKDISQVEQDMDSDFSEEVHDRKRKQ 103 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 E + ++E+ + A + + +++ I Sbjct: 104 GPEANTHETEEAEIERPRQ------FATAAASLRQAWQEMPEITEISSNI---------- 147 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 + E + G+ I ++DQ MF + S P T +L K+ VL+ + I Sbjct: 148 ------ILEESEEGLNIMLVDQDGRSMFREGSKYPYETTRRLLAKMAPVLSQMPNRVEIT 201 Query: 270 GHTDAS-PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 GHT A + A W LS +RA A Q+L + GV ++ + G + +DP Sbjct: 202 GHTTAGGRSVDPAYTGWDLSAERANVARQILAEYGVPSNQFYAVIGKSDSEPLFPNDPYL 261 Query: 329 SANRRIDILVED 340 ++NRR++IL++ Sbjct: 262 ASNRRVEILLKA 273 >gi|292492681|ref|YP_003528120.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4] gi|291581276|gb|ADE15733.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4] Length = 282 Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 55/325 (16%), Positives = 101/325 (31%), Gaps = 73/325 (22%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + + +W I AD M++LM+FF+++ + D K + Sbjct: 10 NEPQEEKSGAPAWVITLADLMSLLMSFFVLLLSFSELDLQKYKQVA-------------- 55 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 + + + G++ +++ +Q Sbjct: 56 ---------------GSMKFAFGVQREIKVKEPPKGTSIIAQEFSPGRPRPTPWDEIRQD 100 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + T D + R++D K++ Sbjct: 101 TIDETKQTLDF------------------------------------SEARIRDTEAKVA 124 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + L + ++ E I+I I ++ F S+ + VL K+ VL Sbjct: 125 ELQNMLQNEIDQGLIVLERIGEQIIIRIQEK---GSFPSGSASFNQDFKPVLDKLRTVLN 181 Query: 261 HSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHH 318 I + GHTD P + R NW LS RA S L + ++ R I G A Sbjct: 182 RIEGKIVVAGHTDDLPIHTSRFRSNWELSTARAVSVIHHLFATDEIAPQRFV-IEGHADT 240 Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341 + +D + NRRI+I + Sbjct: 241 QPLAPNDTAENRVHNRRIEITIMPS 265 >gi|163850073|ref|YP_001638116.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens PA1] gi|163661678|gb|ABY29045.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1] Length = 468 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 100/283 (35%) Query: 58 DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 + + + + G + E + D Sbjct: 183 NPGALDSAATAPADSRLDARAQTAGSKPREPQKESAKDIARQSLSDAMRQAGIKLASAEP 242 Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + K + + K Sbjct: 243 MPLTIPSAEPTKPSAEAAPLASPAEAKPAPPEPTLLAKAEAPPAKDLAPAKDLAPAKELA 302 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 ++ + L L +I+ + L V T G+LISI D+ N MF Sbjct: 303 APADQAAKAAERAALSALKAEIARAVPSLPNGAPAPQVEVRRTGEGVLISITDEINYSMF 362 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ P P+ + L++I ++L + +RGHTD PFR+ DNWRLS RA A Sbjct: 363 GIGSAEPTPKVVKALERIAKILNSRPGRVVVRGHTDGRPFRSETYDNWRLSSARAQMASY 422 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 +L++ G+ E RI +I G+A + +IA++P + NRRI+IL+ Sbjct: 423 MLVRGGLDEARIDRIEGYADRQPRIANNPKAAENRRIEILLRG 465 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 75/241 (31%), Gaps = 14/241 (5%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + III K+ + ++ G+WKI ADFMT +MA FLVMW+IN+T + K+ I +YF Sbjct: 3 DRPHEIIIIKRHGDHEEGHHGGAWKIALADFMTAMMALFLVMWLINSTSKEQKQTIAEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 NP +T + ++ D + D ++ ++ ++ Sbjct: 63 NPVKLAEVTHDRKGVNDPQDTPNDPAPSGKGKGDGGNAEGKGDAAGAPGSRARESALFQD 122 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN--------------YFL 175 L+ ++ + + Sbjct: 123 PYAVLAKLAAEAEAAGPEAASADASALEAGQPGVAGGETGRDPFDPLYWQVAALPRRRTD 182 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 P + + RL A+ S ++ + I P Sbjct: 183 NPGALDSAATAPADSRLDARAQTAGSKPREPQKESAKDIARQSLSDAMRQAGIKLASAEP 242 Query: 236 M 236 M Sbjct: 243 M 243 >gi|254559218|ref|YP_003066313.1| chemotaxis protein MotB [Methylobacterium extorquens DM4] gi|254266496|emb|CAX22260.1| Chemotaxis protein MotB [Methylobacterium extorquens DM4] Length = 474 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 100/256 (39%) Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 + R S + + + + + + + ++ + Sbjct: 216 ESAKDIARQSLSDAMRQAGVKLASAEPMPLTVPSAEPAKPSAEAAPLASPAEAKPAPPEP 275 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 L + ++ L L +I+ + Sbjct: 276 TLLAKAEAPPAKDFAPAKDLAPAKDLAPAKELAAPADQAAKAAETAALSALKAEIARAVP 335 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 L V T G+LISI D+ N MF S+ P P+ + L++I ++L Sbjct: 336 SLPNGAPAPQVEVRRTGEGVLISITDEINYSMFGIGSAEPTPKVVKALERIAKILNSRPG 395 Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + +RGHTD PFR+ DNWRLS RA A +L++ G+ E RI +I G+A + +IA+ Sbjct: 396 RVVVRGHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIDRIEGYADRQPRIAN 455 Query: 325 DPMNSANRRIDILVED 340 +P + NRRI+IL+ Sbjct: 456 NPKAAENRRIEILLRG 471 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 61/163 (37%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + III K+ + ++ G+WKI ADFMT +MA FLVMW+IN+T + K+ I +YF Sbjct: 3 DRAHEIIIIKRHGDHEEGHHGGAWKIALADFMTAMMALFLVMWLINSTSKEQKQTIAEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 NP +T + ++ D + D ++ ++ ++ Sbjct: 63 NPVKLAEVTHDRKGVNDPQDTPNDPAPSGKGKGDGGNAEGKGDAAGAPGSRARESALFQD 122 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 L+ ++ + + Sbjct: 123 PYAVLAKLAAEAEAAGPEAASADASALEAGQPGVAGGETGRDP 165 >gi|149189846|ref|ZP_01868126.1| chemotaxis LafU protein [Vibrio shilonii AK1] gi|148836332|gb|EDL53289.1| chemotaxis LafU protein [Vibrio shilonii AK1] Length = 329 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 71/331 (21%), Positives = 119/331 (35%), Gaps = 60/331 (18%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ D + G+WK+ ADFM LMA FLV+W++ D + +KAI + Sbjct: 3 KQEQVVFKRSGRRHDHEYHGGAWKVALADFMIALMALFLVLWVMQVVDKEERKAIVAHLQ 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + Q S + IDL+ D +T + ++ + Sbjct: 63 MASVFDKSTGSLFDTSQ------SISPIDLASDSSVTSRHDSVHTVTSFFQGDRD----- 111 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 P ++ Sbjct: 112 --------------------------------------------GPESDSLINGTFDTQE 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 RL+ LAK ++ + + AD V T G+ I + D MF + S P Sbjct: 128 RLEALAKVVNEMMRQINADG---NVDVTVTPQGLRIVLQDDYKQNMFRRGGSTLTPFFED 184 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS--LDRAYSAYQVLMKSGVSEDR 308 +L + V + I GHTDA+ +R + RA SA Q L+ G+ E R Sbjct: 185 LLLALAPVFQRVENPMIISGHTDATQYRKAFSSSSNWELSSSRANSARQTLVAGGMPEQR 244 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + +++G + L DP +S NRRI++ + Sbjct: 245 VLQVTGMSDRALLNQQDPKSSENRRIELFIL 275 >gi|240137207|ref|YP_002961676.1| Chemotaxis protein MotB [Methylobacterium extorquens AM1] gi|240007173|gb|ACS38399.1| Chemotaxis protein MotB [Methylobacterium extorquens AM1] Length = 468 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 60/267 (22%), Positives = 97/267 (36%) Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 + + G + E + D Sbjct: 199 LDARAQTAGSKPREPQKESAKDIARQSLSDAMRQAGVKLASAEPMPLTVPSAEPAKPSPE 258 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 + K + + K ++ L Sbjct: 259 AAPLASPAEAKPAPPEPTLLAKAEAPPAKDFTPAKDLAPAKELAAPADQAAKAAETAALS 318 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 L +I+ + L V T G+LISI D+ N MF S+ P P+ + L+ Sbjct: 319 ALKAEIARAVPSLPNGAPAPQVEVRRTGEGVLISITDEINYSMFGIGSAEPTPKVVKALE 378 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 +I ++L + +RGHTD PFR+ DNWRLS RA A +L++ G+ E RI +I Sbjct: 379 RIAKILNSRPGRVVVRGHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIDRIE 438 Query: 314 GFAHHRLKIASDPMNSANRRIDILVED 340 G+A + +IA++P + NRRI+IL+ Sbjct: 439 GYADRQPRIANNPKAAENRRIEILLRG 465 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 61/163 (37%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + III K+ + ++ G+WKI ADFMT +MA FLVMW+IN+T + K+ I +YF Sbjct: 3 DRAHEIIIIKRHGDHEEGHHGGAWKIALADFMTAMMALFLVMWLINSTSKEQKQTIAEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 NP +T + ++ D + D ++ ++ ++ Sbjct: 63 NPVKLAEVTHDRKGVNDPQDTPNDPAPSGKGKGDGGNAEGKGDAAGAPGSRARESALFQD 122 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 L+ ++ + + Sbjct: 123 PYAVLAKLAAEAEAAGPEAASADASALEAGQPGVAGGETGRDP 165 >gi|170741247|ref|YP_001769902.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46] gi|168195521|gb|ACA17468.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46] Length = 277 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 110/327 (33%), Gaps = 62/327 (18%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + ++K + W + +AD M +LM+FF+++ + D +A+ F Sbjct: 1 MARRKRGGAHGGHG---WFVTFADLMALLMSFFVMVCAYSTQDQRKLQAVAGSFRDAFGV 57 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + E++ Sbjct: 58 NKESRFNGIIEKDGLP-------------------------------------------- 73 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 S +T D + D +N F + + L D+ Sbjct: 74 -SATRLRDLRPVTPDKASDRTTPPLPDEVFDNGVPQNGFRDGFGLAMASLRQALQDLPDI 132 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 A+ + K VL T G+ +S++DQ MF S+ P T VL+++ Sbjct: 133 AE-------------LSKNVLIHETARGLDVSLVDQDGRSMFPDGSTRPNDRTRQVLERL 179 Query: 256 GEVLAHSTEVISIRGHTDA-SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + + I+I G+T A P W LS RA S ++L +GV ++R + +SG Sbjct: 180 APAIRRMSNKIAISGYTAATRPGLRAPAPPWELSAGRAISVREILASNGVPDERFTVVSG 239 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDR 341 A +P +ANRR+ I + Sbjct: 240 KADTEPLFPDNPYIAANRRVTITLLRD 266 >gi|149203099|ref|ZP_01880070.1| OmpA/MotB [Roseovarius sp. TM1035] gi|149143645|gb|EDM31681.1| OmpA/MotB [Roseovarius sp. TM1035] Length = 287 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 70/334 (20%), Positives = 129/334 (38%), Gaps = 54/334 (16%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 Q N + +IIK+K + ++ G+WK+ YADF+T +MAFFL+MW++NAT + +K I Y Sbjct: 4 QSNAKPVIIKRKKVVGGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEQQRKGISDY 63 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F+P P R+S E + L+ GS + Sbjct: 64 FSPTV---------------PISRTSGGGDGAFGGESVFSQETLLQSGSGASQP------ 102 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 S + + E L + A Sbjct: 103 ---------------------------LATSSQQVRGEMGLVEGGNLSADQEADAQAFST 135 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + + +V+D++++ ++ T G++I I + +F+ + P Sbjct: 136 IEAM-----LTGRSGESMVSDDLLRHIVTRVTDEGLVIEIFELPGALLFEPDQTSPTRLL 190 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + + ++ GHT A P + W LS R Q L +G++ R Sbjct: 191 QDLSMLLASAANLVINDAALAGHTRARPITLVRNPVWDLSTARVDQFRQRLEDAGLAAKR 250 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 I +I+G A ++ DPM+ N R+++++ + Sbjct: 251 IRRIAGHADRSPAVS-DPMDLRNNRLELILLRSE 283 >gi|126463722|ref|YP_001044836.1| putative chemotaxis MotB protein [Rhodobacter sphaeroides ATCC 17029] gi|332559779|ref|ZP_08414101.1| MotB2 [Rhodobacter sphaeroides WS8N] gi|126105386|gb|ABN78064.1| putative chemotaxis MotB protein [Rhodobacter sphaeroides ATCC 17029] gi|332277491|gb|EGJ22806.1| MotB2 [Rhodobacter sphaeroides WS8N] Length = 278 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 67/336 (19%), Positives = 130/336 (38%), Gaps = 62/336 (18%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 Q N ++IK+K + ++ G+WK+ YADF+T +MAFF++MW++NAT + + Sbjct: 2 AGQSNAAPVVIKRKKVVQGGGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEKQR---- 57 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 KG+ D NP ++ D + T R Sbjct: 58 --------------KGLADYFNPTIPMNRVSGGGEGAFGGNSVFHDQTMTQTGTGAANDR 103 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + ++ Sbjct: 104 ------------------------------------------ATAELKASGETGQEGADA 121 Query: 187 KRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 +K+L+++ K + + + + +++ V+ T G++I I D + P+F + P Sbjct: 122 AEQKQLEEVEKMLKARSGESMTMQRLLRHVVTRITDEGLVIEIFDLPDVPLFFGDTDQPE 181 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + + + E+L +T I++ GH + P I W +S RA +L G+ Sbjct: 182 AVLPQIARLLAEILPITTNRIAVNGHMRSYPITLIRNPVWDISAARAQRMRGLLESEGLP 241 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +R+ ++SGFA + + DPM N R+++++ R Sbjct: 242 GERMQRVSGFADRK-IVTPDPMAVRNNRLEVILLRR 276 >gi|294675563|ref|YP_003576178.1| chemotaxis protein MotB [Rhodobacter capsulatus SB 1003] gi|294474383|gb|ADE83771.1| chemotaxis protein MotB [Rhodobacter capsulatus SB 1003] Length = 283 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 63/332 (18%), Positives = 122/332 (36%), Gaps = 55/332 (16%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + +IIK+K + ++ G+WK+ YADF+T +MAFFL+MW++NAT + +K I Y Sbjct: 4 HDGVAPVIIKRKKVVGGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGIADY 63 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FNP + G S + + + + Sbjct: 64 FNPTIPINRISGGGEGAFGGDSVFSEDQVAQNGTGASGQMPTEERQARGDSGA------- 116 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 K +D + + K + S E+ L+ Sbjct: 117 --------------AKEEQKQDQAEFDRMAKEIEKALSATSGESMVSEQLA--------- 153 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + ++ + T G+++ D + P+F ++ P P Sbjct: 154 ------------------------RHIVTKVTDEGLIVEFFDLEDEPLFRPDTAEPEPIL 189 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + + V + ++I GHT + P W LS +RA ++ +G R Sbjct: 190 GEIAGMLTRVFGLTKNNVAINGHTRSYPSMLRTNPVWDLSSERAQRMRILMETAGFDAAR 249 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + ++SGFA + + + M+ N R+++++ Sbjct: 250 LQRVSGFADRKPAVETR-MSVRNNRLELILLR 280 >gi|315649793|ref|ZP_07902876.1| OmpA/MotB domain protein [Paenibacillus vortex V453] gi|315274767|gb|EFU38148.1| OmpA/MotB domain protein [Paenibacillus vortex V453] Length = 270 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 107/323 (33%), Gaps = 73/323 (22%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 D + W I YAD +T+L+ FF+VM+ ++ D + K + Q ++ Sbjct: 12 KQDGSDQRDRWMITYADLITLLLIFFVVMYAMSRLDTEKYKLVTQSLQATFQS------- 64 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 + E S + H Sbjct: 65 ---GDSILEMGSGITGTADTENHKNPPP-------------------------------- 89 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + ++T D E+ T+ E + +E ++LA + Sbjct: 90 -QTAVTEDKEEDNGEAPLTERELAFRAQE---------------------EELANFMGLI 127 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + + + + + GI I++ D+ +FD + VL K+ + Sbjct: 128 QQYVKDNQLEEDIFISDEPQGIAITLSDR---FLFDVGKAELKSGAAPVLGKLASLFGDL 184 Query: 263 TEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHR 319 +SI GHTD P + +DNW LS RA S + L S + + +G+A R Sbjct: 185 NTTVSIEGHTDNVPIGRHSSYKDNWELSGARAMSVLRFFLEDSKLDPAGF-QYAGYADTR 243 Query: 320 LKIASDPMNS--ANRRIDILVED 340 + NRR++I V Sbjct: 244 PAADNATPEGKQKNRRVEITVLR 266 >gi|77464880|ref|YP_354384.1| putative chemotaxis MotB protein [Rhodobacter sphaeroides 2.4.1] gi|77389298|gb|ABA80483.1| putative chemotaxis MotB protein [Rhodobacter sphaeroides 2.4.1] Length = 278 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 67/336 (19%), Positives = 129/336 (38%), Gaps = 62/336 (18%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 Q N ++IK+K + ++ G+WK+ YADF+T +MAFF++MW++NAT + + Sbjct: 2 AGQSNAAPVVIKRKKVVQGGGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEKQR---- 57 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 KG+ D NP ++ D + T R Sbjct: 58 --------------KGLADYFNPTIPMNRVSGGGEGAFGGNSVFHDQTMTQTGTGAANDR 103 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ Sbjct: 104 ------------------------------------------ATAELKASGEMGQEGADA 121 Query: 187 KRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 +K+L+++ K + + + + +++ V+ T G++I I D + P+F + P Sbjct: 122 AEQKQLEEVEKMLKARSGESMTMQRLLRHVVTRITDEGLVIEIFDLPDVPLFFGDTDQPE 181 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + + + E+L +T I++ GH + P I W +S RA +L G+ Sbjct: 182 AVLPQIARLLAEILPITTNRIAVNGHMRSYPITLIRNPVWDISAARAQRMRGLLESEGLP 241 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +R+ ++SGFA + + DPM N R+++++ R Sbjct: 242 GERMQRVSGFADRK-IVTPDPMAVRNNRLEVILLRR 276 >gi|118588413|ref|ZP_01545822.1| probable chemotaxis protein [Stappia aggregata IAM 12614] gi|118439119|gb|EAV45751.1| probable chemotaxis protein [Stappia aggregata IAM 12614] Length = 285 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 108/314 (34%), Gaps = 51/314 (16%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 W + +AD M++L+ FF+++ + D + + + ++ K E Sbjct: 13 APDWLVTFADLMSLLVCFFVLIISFSIQDKEKLQVVAGSMREAFGVKDSSRKTGIIEVEG 72 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 K +++ + + + ++ + + Sbjct: 73 IPIRDYMKDISQVEQEMDSDFSQERHEKRRKQGPEANTHDTLEADIE------------- 119 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + A + + +++ I Sbjct: 120 ---------------------KPRQFATAAASLRQAWQEMPEITEISSNI---------- 148 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 + E T G+ I ++DQ MF + S P T ++ K+ VL+ I I Sbjct: 149 ------ILEETEEGLNIMLVDQDGRSMFREGSKYPYETTRRLIAKMAPVLSQMPNRIEIT 202 Query: 270 GHTDA-SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 GHT A + + W LS +RA A Q+L + GV +++ + G A +DP Sbjct: 203 GHTTAGRQSIDPSYTGWELSSERANIARQILSEYGVPDNQFYSVVGKADTEPLFPNDPYL 262 Query: 329 SANRRIDILVEDRQ 342 +ANRRI IL++ + Sbjct: 263 AANRRIGILLKAEE 276 >gi|94312620|ref|YP_585829.1| flagellar motor rotation proteinOmpA/MotB [Cupriavidus metallidurans CH34] gi|93356472|gb|ABF10560.1| OmpA/MotB, protein that enables flagellar motor rotation [Cupriavidus metallidurans CH34] Length = 325 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 75/332 (22%), Positives = 129/332 (38%), Gaps = 66/332 (19%) Query: 13 QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72 + I+IKK P+ SWKI YADFMT +MA FLV+W+++++ + +YF Sbjct: 8 RPIVIKK-AKSHAKPHGNHSWKIAYADFMTAMMALFLVLWLLSSSSPKVLVGVAEYFRTP 66 Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 K + + Sbjct: 67 LKVAIAGGDKSSLSTSVIPGGG-------------------------------------- 88 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + + K + + D ++ ++ E+ L L K ++ L Sbjct: 89 ---------KDVTAKDGEIMKAQTNDPAADAQRRRDQIESERLRGLKKRLEQIIENNPVL 139 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + +L + T G+ I I+D +N PMF S+ P +L Sbjct: 140 RQ----------------FRPQLLLDITSEGLRIQILDTQNRPMFRTGSAAVEPYMRTIL 183 Query: 253 QKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 ++IG VL +S+ GHTD++ + A NW LS DRA ++ Q L+ G+ E ++ Sbjct: 184 REIGPVLNELPNKVSLSGHTDSAKYMMGQRAYSNWELSADRANASRQELVAGGMEEGKLL 243 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ G A +DP+ NRRI I+V +++ Sbjct: 244 RVLGLADTMPLEKNDPLAPVNRRISIVVLNQR 275 >gi|77359764|ref|YP_339339.1| chemotaxis protein [Pseudoalteromonas haloplanktis TAC125] gi|76874675|emb|CAI85896.1| putative chemotaxis protein [Pseudoalteromonas haloplanktis TAC125] Length = 319 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 112/324 (34%), Gaps = 65/324 (20%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 ++ + W + YAD+MT++ AFF+V++ I ++ + + Sbjct: 4 RRLRNTTTKSQHTERWLVSYADYMTIMFAFFVVLYAIAINKEEKFQVLSDSIGYVFDKSA 63 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 ++ + D + + +T L S +++ +L + SN Sbjct: 64 RQHS---------QQGTGVNGDAILTDRVTPEQEVLYGESILKEEHGPKLLDGQSDTSNI 114 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +Q K L L Sbjct: 115 EQKLLGKP----------------------------------------------LDSLLA 128 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 K+ S+L + D E ++ ++I + + +F SS+ V++ I + Sbjct: 129 KLQSSLIDEIRDGEA---SLELSQDWLIIEL---SSGMLFSSGSSVAQVRAKQVVKIIKD 182 Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 ++A I +RG+TD N R NW LS+ RA + L G++ R+ I G+ Sbjct: 183 IIAPVDNYIRVRGYTDNQTIGNEMYRSNWELSVARATAVLVELESLGINSARM-AIEGYG 241 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 + +D + NR++ I + Sbjct: 242 QYSPFATNDTKQGRAENRKVVIAL 265 >gi|254564195|ref|YP_003071290.1| chemotaxis protein MotB [Methylobacterium extorquens DM4] gi|254271473|emb|CAX27488.1| putative chemotaxis protein MotB [Methylobacterium extorquens DM4] Length = 277 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 56/323 (17%), Positives = 108/323 (33%), Gaps = 59/323 (18%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + W + +AD M +LM+FF+++ + D + + Sbjct: 3 KKKRGGAHGGHGWFVTFADLMALLMSFFVMIAAYSTQDQKKLQVVAGSMR---------- 52 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 D +K + L+ +++ L + + + + Sbjct: 53 ------------------DAFGVNKESKFAGILESEGIPTADKFKHLRDVPPERATDRTT 94 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 +S D + + + AM+ + +L+K Sbjct: 95 PPQIDSGLDDGIPDRGYPDAFG--------------QAAASLRQAMQDMPEVAELSKN-- 138 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 V+ R G+ +SI+DQ MF + SS P T +L+++ L Sbjct: 139 --------------VIIAPNRKGLDVSIVDQDGRSMFPEGSSRPNDRTRRLLERLTPTLM 184 Query: 261 HSTEVISIRGHT-DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 I++ G T P W LS +RA S VL +G+ +DR + ++G A Sbjct: 185 KLPNRIAVTGFTATTRPGTRDTAPPWELSANRALSVRDVLAGAGLPDDRFASVTGKADTE 244 Query: 320 LKIASDPMNSANRRIDILVEDRQ 342 +P +ANRR+ + + Sbjct: 245 PMFPDNPYLAANRRVTVTLLAEP 267 >gi|259417151|ref|ZP_05741070.1| OmpA/MotB [Silicibacter sp. TrichCH4B] gi|259346057|gb|EEW57871.1| OmpA/MotB [Silicibacter sp. TrichCH4B] Length = 279 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 117/310 (37%), Gaps = 57/310 (18%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 +WK+ YADF+T +MAFFL+MW++NAT + +K + YF+P + G Q Sbjct: 27 AWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGLADYFSPSIPLSRVSGGGNGAFQG--- 83 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 D E + + + + + S ++E Sbjct: 84 -------DTMFTEDVKPQNGIGATKENPTDASRSQGDTGVADDQQSDEAEEANF------ 130 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 L+ + +V+ ++ Sbjct: 131 ----------------------------------------LKIEEALMGRGGESMVSIDM 150 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 + ++ T G++I + + + +F+ S P +L+ + V A ++I GH Sbjct: 151 ARHIVTRVTDEGLIIELFETEDAKLFENGSERPTILMRDLLRMVARVTASVENNVAIGGH 210 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331 ++P W LS RA + ++L G+ RIS+++G+A + +PM++ N Sbjct: 211 VASTPVVIANNPVWALSHARADATRELLETGGMQAKRISRVTGYADRD-LASKNPMSARN 269 Query: 332 RRIDILVEDR 341 RI+I + + Sbjct: 270 NRINITLLRK 279 >gi|115523189|ref|YP_780100.1| flagellar motor protein MotB [Rhodopseudomonas palustris BisA53] gi|115517136|gb|ABJ05120.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53] Length = 423 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 106/277 (38%), Gaps = 5/277 (1%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ---KKQ 123 +P K + + D +P + L K +L + Q Sbjct: 146 TSLDPGRKEGVKGGEAYRDPFDPISWPMASSSPLEDKALGRKEIGNLPFDEDAAGLIEGQ 205 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 +R + + + + D K L + + + Sbjct: 206 GRRPSQGVPDATAAPAAPSEAAQPPPAKPDQPDNPKPVRLFADEGPKLQPPAERAAAPRP 265 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + L I++ L+ L T G+LI++ D N MF S+ Sbjct: 266 DPAPAQSSASKLQAAINAALASL--GAAHPATEVRETSEGLLINLTDDANYGMFANGSAE 323 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 P P + L KI +++ ++ +RGHTD P+R+ DNWRLS RA+ A+ +L++ G Sbjct: 324 PTPGLVRTLDKITPLISQQRGLVIVRGHTDDRPYRSADYDNWRLSTARAHMAFHMLIRGG 383 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + RI +I G+A R K +DP NRRI+IL+ Sbjct: 384 LDAKRIERIEGYADRRPKTPNDPSAPQNRRIEILIRA 420 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 6/170 (3%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 +Q+ + III+++ +D G WKI YADFMT +MAFFLVMW+++AT +T++++ Sbjct: 2 ADQDRPELIIIRRRSDLDVEEK-SGVWKIAYADFMTAMMAFFLVMWLMSATTPETRESVA 60 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP T D + + + E K G Q+ Q + Sbjct: 61 TYFNPIKLTDSTP-----DRKGLHDAKRVDPGKADEGETARPKPEPDKAGEATQRPQLPK 115 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 ++ L + + + ++ + E Y P Sbjct: 116 THHDEAALFRDPYTILSEIAGAPPPLAQNGTSLDPGRKEGVKGGEAYRDP 165 >gi|188584558|ref|YP_001928003.1| OmpA/MotB domain protein [Methylobacterium populi BJ001] gi|179348056|gb|ACB83468.1| OmpA/MotB domain protein [Methylobacterium populi BJ001] Length = 277 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 115/328 (35%), Gaps = 62/328 (18%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + KKK + W + +AD M +LM+FF+++ + D + + Sbjct: 1 MAKKKRGGAHGGHG---WFVTFADLMALLMSFFVMIAAYSTQDQKKLQVVAGSMR----- 52 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 D +K + L+ +++ L + + Sbjct: 53 -----------------------DAFGVNKESKFAGILESEGIPTADKFKHLRDVPPERA 89 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + +S D + + + AM+ + +L Sbjct: 90 TDRTTPPQIDSGLDDGIPDRGYPDAFG--------------QAAASLRQAMQDMPEVAEL 135 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +K V+ +R G+ +SI+DQ MF + SS P T +L+++ Sbjct: 136 SKN----------------VIIAPSRKGLDVSIVDQDGRSMFPEGSSRPNDRTRRLLERL 179 Query: 256 GEVLAHSTEVISIRGHT-DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + I++ G T A P W LS +RA S VL +G+ +DR + ++G Sbjct: 180 APTLMKLSNRIAVTGFTATARPGTRDTAPPWELSANRALSVRDVLANAGLPDDRFASVAG 239 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 A +P +ANRR+ + + Sbjct: 240 KADTEPMFPDNPYLAANRRVTVTLLSEP 267 >gi|120553254|ref|YP_957605.1| flagellar motor protein MotB [Marinobacter aquaeolei VT8] gi|120323103|gb|ABM17418.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8] Length = 305 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 108/321 (33%), Gaps = 65/321 (20%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 ++ + +W + +AD M++LM FF+++ + D K I Sbjct: 5 PEEEKPGIPAWVVTFADLMSLLMCFFVLLLSFSEIDAQKFKQIAGEL-----------SK 53 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 F Q + I + + + + + ++ Sbjct: 54 AFGVQREVPALEIPQGTSPIFDKFSPAPPEPTVVNEVKQTTTD----------------- 96 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + +EK + ++++ +I Sbjct: 97 --------------------------VQPEIQTLKSPEEKAIEETIQEQMDANMARILEV 130 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L + D + + I+I I ++ F S+ E +L + EVLA Sbjct: 131 LEPAILDG---RINVSEDQRRIIIRIEEK---GSFASGSAQLTWEFEGLLMDMAEVLADM 184 Query: 263 TEVISIRGHTDASPFRN-IARDNWRLS-LDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 ++I GHTD P R NW LS A A +L + V+ DRI +++G A Sbjct: 185 PGDLAIEGHTDNVPIRTERFYSNWDLSAARAAAVANVLLAREQVTPDRI-RVTGLADTEP 243 Query: 321 KIASDP--MNSANRRIDILVE 339 ++ + + NRR++I+++ Sbjct: 244 RVPNTSPENRAKNRRVEIVID 264 >gi|289548706|ref|YP_003473694.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484] gi|289182323|gb|ADC89567.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484] Length = 243 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 7/203 (3%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 + + + + + + +E L + ++ ++ Q + K+I Sbjct: 37 AQAGKQAALEYAQAFARAFGMRLVPYQETLPRQILPQPVPPKVRPTEKGQKILKQIMELE 96 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 L + + GI + + ++ +FD S+ P+ +L KI E+L Sbjct: 97 KTLKTIGLEGKLKVAYEAIGIRLILQERL---LFDSGSADIKPQFYPILDKIAELLNSIP 153 Query: 264 EVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GHTD P NW LS RA S + + GVS DR+ SG+A R Sbjct: 154 NPVEVEGHTDNIPISTGRFPSNWELSTARASSVVRYFIAKGVSPDRLKA-SGYADTRPIA 212 Query: 323 ASDPMNSA--NRRIDILVEDRQG 343 ++ NRR++I++ + +G Sbjct: 213 SNATPEGREQNRRVEIVIINIKG 235 Score = 60.4 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 2/96 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + W I YADF+T+L+ F+ ++ + Q F + Sbjct: 3 RRKKCPEE--VSERWAIPYADFLTLLLCLFIALFAMAQAGKQAALEYAQAFARAFGMRLV 60 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 + Q P+ + I K ++L+ Sbjct: 61 PYQETLPRQILPQPVPPKVRPTEKGQKILKQIMELE 96 >gi|218778865|ref|YP_002430183.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760249|gb|ACL02715.1| OmpA/MotB domain-containing protein [Desulfatibacillum alkenivorans AK-01] Length = 259 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 110/325 (33%), Gaps = 72/325 (22%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + + W + +AD +T+LM FF+++ +++ D + + F Sbjct: 3 KQPKEIESPDTTMWMVTFADLVTLLMTFFVLLLTMSSMDTKALQTMFTLF---------- 52 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + +D S ++ D + + + L+ Sbjct: 53 ------------AGASGPLDFSPYGKVSPMQGDADMTPGPLDGMSPDNVDMLTTLTEILD 100 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 +Y P + K L ++ + ++ L Sbjct: 101 ------------------------------NSDYIKEPEAILKRLTVRSRDVVKQL---- 126 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + G++++ T MFD SS PE +L + +VL Sbjct: 127 --------TERYTDQIYVNEDERGVVLTF---DETVMFDPGSSRIRPEIYPLLDVLAQVL 175 Query: 260 AHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAH 317 + + I GH+D++P + NW LSL RA + + +SEDR+ + G + Sbjct: 176 KAVSGRVLIIGHSDSTPMHSVQYDSNWDLSLSRALNVLYYFTTEHDLSEDRLG-VGGMGN 234 Query: 318 HRLKIASDPMNSA--NRRIDILVED 340 + ++ NRR++I++ Sbjct: 235 TKPIASNKTQAGRDKNRRVEIVITK 259 >gi|254491010|ref|ZP_05104191.1| OmpA family protein [Methylophaga thiooxidans DMS010] gi|224463523|gb|EEF79791.1| OmpA family protein [Methylophaga thiooxydans DMS010] Length = 263 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 107/321 (33%), Gaps = 70/321 (21%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K +N+ + +AD MT+LM FF+++ + D K + + Sbjct: 2 KSRSQKPVDNVPRYMGTFADLMTLLMCFFVLLVAMAEIDALKFKMVVRSME--------- 52 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 D + + ++ +G++ K+ + Sbjct: 53 -------------------DAFGVQRPEPDEPEIIMGTSVIKQTFS-------------- 79 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + S ++ + K + A+ R+Q L + Sbjct: 80 -----------------TAAPKETPLSTVRQASDSDKDALKVEDAAVYEAARMQTLMDDL 122 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + S + +++ + E I+I I ++ F + + VL I E L Sbjct: 123 TKKFSTAINNDL---LSLEQLPDRIMIRINEKT---SFTSGGAKLKTAFLPVLSLIAETL 176 Query: 260 AHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317 A + + GH+D P R R NW LS RA S L++ + + +I +A Sbjct: 177 AELDDTFIVSGHSDNVPLRSGNYRSNWELSGARATSVVHALLRHPKLVPSQF-RIEAYAD 235 Query: 318 HRLKIASDPMNSA--NRRIDI 336 + ++D NRR++I Sbjct: 236 TQPVESNDTAAGRATNRRVEI 256 >gi|163854227|ref|YP_001642270.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens PA1] gi|218533172|ref|YP_002423988.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4] gi|240141687|ref|YP_002966167.1| putative chemotaxis protein MotB [Methylobacterium extorquens AM1] gi|163665832|gb|ABY33199.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1] gi|218525475|gb|ACK86060.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4] gi|240011664|gb|ACS42890.1| putative chemotaxis protein MotB [Methylobacterium extorquens AM1] Length = 277 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 56/323 (17%), Positives = 108/323 (33%), Gaps = 59/323 (18%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + W + +AD M +LM+FF+++ + D + + Sbjct: 3 KKKRGGAHGGHGWFVTFADLMALLMSFFVMIAAYSTQDQKKLQVVAGSMR---------- 52 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 D +K + L+ +++ L + + + + Sbjct: 53 ------------------DAFGVNKESKFAGILESEGIPTADKFKHLRDVPPERATDRTT 94 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 +S D + + + AM+ + +L+K Sbjct: 95 PPQIDSGLDDGIPDRGYPDAFG--------------QAAASLRQAMQDMPEVAELSKN-- 138 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 V+ R G+ +SI+DQ MF + SS P T +L+++ L Sbjct: 139 --------------VIIAPNRKGLDVSIVDQDGRSMFPEGSSRPNDRTRRLLERLAPTLM 184 Query: 261 HSTEVISIRGHT-DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 I++ G T P W LS +RA S VL +G+ +DR + ++G A Sbjct: 185 KLPNRIAVTGFTATTRPGTRDTAPPWELSANRALSVRDVLAGAGLPDDRFASVTGKADTE 244 Query: 320 LKIASDPMNSANRRIDILVEDRQ 342 +P +ANRR+ + + Sbjct: 245 PMFPDNPYLAANRRVTVTLLAEP 267 >gi|253577343|ref|ZP_04854660.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251843243|gb|EES71274.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 269 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 53/329 (16%), Positives = 121/329 (36%), Gaps = 83/329 (25%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 K K D + SW + Y+D MT+++A F+V++ Sbjct: 4 KNKKHQDHEEHADESWLLPYSDLMTLMLALFIVLY------------------------- 38 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + +D + +++ + G T+ Q + NN LS Sbjct: 39 ----------------GMSTVDAMKFQEMSEAFKSVLTGGTSVLDQNAMISNNKTSLSEI 82 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + + ++ L ++K+ L + ++ L+ L K Sbjct: 83 ETPKSTQDGL------------------------------MTKKNELKRQEQQNLEALKK 112 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 ++ + + + + + + ++ ++I+I D+ +F ++ PE + + I Sbjct: 113 QLDTYIKE---NGLTDDLETKLNQSQLMITISDK---ALFASGEAVVKPEARQLAKAISN 166 Query: 258 VLAHSTEV-ISIRGHTDASPFRN-IARDNWRLSLDRAYS-AYQVLMKSGVSEDRISKISG 314 +L + + + GHTD P NW LS RA + +L+ + + + S I G Sbjct: 167 MLQQFPDYEVIVSGHTDNVPISTYEFPSNWDLSSVRALNFMKILLLNTNLDPKKFSAI-G 225 Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDR 341 + + ++D + NRR+++ + + Sbjct: 226 YGEYHPVASNDTAAGRAQNRRVEVSIIRK 254 >gi|85706141|ref|ZP_01037236.1| putative chemotaxis MotB protein [Roseovarius sp. 217] gi|85669305|gb|EAQ24171.1| putative chemotaxis MotB protein [Roseovarius sp. 217] Length = 287 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 70/333 (21%), Positives = 123/333 (36%), Gaps = 54/333 (16%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 N +IIK+K + ++ G+WK+ YADF+T +MAFFL+MW++NAT + +K I Y Sbjct: 4 HSNAAPVIIKRKKIVGGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEQQRKGISDY 63 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F+P + G S + ++ ++N++ + + Sbjct: 64 FSPSVPINRISGGGDGAFGGDSVFSEDTLVQNGTG-------ASQRLATSNRQANGENVA 116 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 LS Q E + D +G Sbjct: 117 IEKGSLSAGAQVEAEAFAAIEDMLRGGSG------------------------------- 145 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 LVAD ++ ++ T ++I I D +F+ + P Sbjct: 146 ---------------ESLVADETLRHIVTRLTDEELVIEIFDLPQAQLFEVDGVVATPLL 190 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + + +++ GHT A P W LS RA Q+L G+S R Sbjct: 191 KDLTALLASAANLVVNDVALAGHTRAQPITLARNPVWDLSSSRANQFRQMLEAEGLSAKR 250 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 + +I+G A + DPM+ N R+++++ Sbjct: 251 MRRITGHADRTSAVL-DPMDLRNNRLEMILLRS 282 >gi|119470009|ref|ZP_01612814.1| putative chemotaxis protein [Alteromonadales bacterium TW-7] gi|119446719|gb|EAW27992.1| putative chemotaxis protein [Alteromonadales bacterium TW-7] Length = 319 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 112/327 (34%), Gaps = 66/327 (20%) Query: 16 IIKKK-VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 +++++ + W + YAD+MT++ AFF+VM+ I ++ + + Sbjct: 1 MMRRRFGRSAHKNQHTERWLVSYADYMTIMFAFFVVMYAIAINKEENFQILSDSLEQVFD 60 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 S ++ +Q + D E + + Y Sbjct: 61 K----SARVYSQQGTGVDGTGILTDRVTPE------------------------DELLYG 92 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + + E L SE K K L Sbjct: 93 ESINKEEQGPELLDGQSETSNIQQKYLG---------------------------KPLDS 125 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L K+ S L + D E + ++I + + +F S++ V++ Sbjct: 126 LLTKLQSALIDEIRDGEAN---LELNQDWLIIEL---SSGMLFSSGSAVAHSRAKQVVKI 179 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +++A I +RG+TD +N R NW LS+ RA S L G++ R+ I Sbjct: 180 VKDIIAPVDNYIRVRGYTDDETIKNEIFRSNWELSVARATSILVELEALGINSARM-AIE 238 Query: 314 GFAHHRLKIASDP--MNSANRRIDILV 338 G+ + +D + NR++ I + Sbjct: 239 GYGQYSPFAPNDTDEGRAENRKVVIAL 265 >gi|260775707|ref|ZP_05884603.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC BAA-450] gi|260608123|gb|EEX34292.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC BAA-450] Length = 294 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 105/327 (32%), Gaps = 63/327 (19%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 + P W +AD M++LM FF+++ + D K I Sbjct: 7 KVTCPPPGAPKWLSTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSME----------- 55 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 F Q+ + K I + + + + + ++ ++ Sbjct: 56 YAFGVQHQIKVVDIPKGTSVIATEFRPGRPEPTPLNFIMQHTSELTKPHLDLQPGEERQG 115 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 K + + + LA I + Sbjct: 116 GGKGH-------------------------------------EEAESNEANKALAAIIQA 138 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 V + + V E ++I I ++ MF + S+ P +++++ +++ Sbjct: 139 AFKREVDEGM---VDVEDLGQELVIRIREK---GMFPQGSAFLQPAFRPLIRQLADLIKD 192 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 I I GHT + F + R +W LS RA S + K G R+ I G++ H+ Sbjct: 193 VPGQIRIAGHTSSMTFDSELYRSSWDLSALRAASVVLEMEKVPGFDSHRV-AIQGWSEHK 251 Query: 320 LK----IASDPMNSANRRIDILVEDRQ 342 + +S RR++I + + Sbjct: 252 PLSSEQYPNSVGSS--RRVEISLRQGE 276 >gi|126730120|ref|ZP_01745932.1| putative chemotaxis MotB protein [Sagittula stellata E-37] gi|126709500|gb|EBA08554.1| putative chemotaxis MotB protein [Sagittula stellata E-37] Length = 279 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 114/335 (34%), Gaps = 58/335 (17%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 IIIK+K + ++ G+WK+ YADF+T +MAFFL+MW++NAT + +K I Sbjct: 2 SGDNELAPIIIKRKKVVAGGGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGIA 61 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YF P + G + + + T + Sbjct: 62 DYFTPTIAMARVSGGGDGPLGGDSVFAENTLPRMGSGSTSLNPAASNGEQGTFTEGDTGD 121 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ + + + + Sbjct: 122 DAADM----------------------------------------DEAFKEVEEMLMGRG 141 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 +L + I + T G++I + + +F + P P Sbjct: 142 GESMVADELMEHI----------------VTRVTDEGLVIEFFESEHARLF-TGDATPTP 184 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + + T ++I GH +SP +W +S RA + ++L GV E Sbjct: 185 LLEDLALVLARASEVVTNQMAIEGHVASSPLVLARDPSWDVSGLRASAFRELLTGEGVPE 244 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +R+ +++ +A + PMN+ N RI+++ Sbjct: 245 NRVKRVTSYADREPAHKN-PMNARNNRIEVVFLRD 278 >gi|220924426|ref|YP_002499728.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219949033|gb|ACL59425.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060] Length = 277 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 110/327 (33%), Gaps = 62/327 (18%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +KK + W + +AD M +LM+FF+++ + D +A+ Sbjct: 1 MARKKRGGAHGGHG---WFVTFADLMALLMSFFVMIAAYSTQDQKKLQAVAGSMRDAFGT 57 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + E+N Sbjct: 58 NRESRFNGIIEKNGLP-------------------------------------------- 73 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 S +T D + D +N + + + L D+ Sbjct: 74 -SATRLRDPRDVTPDKASDRTTPPLPDEVFDNGVPQNGYRDGFGLAMASLRQALQDLPDI 132 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 A+ + K VL T G+ +S++DQ N MF S+ P T VL+++ Sbjct: 133 AE-------------LSKNVLIHETERGLDVSLVDQDNRSMFPDGSTRPNDRTRQVLERL 179 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + + I++ G+T A+ W LS RA S ++L +G+ +DR + +SG Sbjct: 180 APTIRSLSNRIAVAGYTAATRPGRRPPAPPWELSTGRAISVREILAGAGIPDDRFAVVSG 239 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDR 341 A +P +ANRR+ I + Sbjct: 240 KADTEPLFPDNPYIAANRRVTITLLRD 266 >gi|332533102|ref|ZP_08408971.1| flagellar motor rotation protein MotB [Pseudoalteromonas haloplanktis ANT/505] gi|332037384|gb|EGI73838.1| flagellar motor rotation protein MotB [Pseudoalteromonas haloplanktis ANT/505] Length = 319 Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 110/324 (33%), Gaps = 65/324 (20%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 ++ + W + YAD+MT++ AFF+V++ I ++ + + Sbjct: 4 RRLRHSAAKSQHTERWLVSYADYMTIMFAFFVVLYAIAINKEEQFQILSDSLEQVF---- 59 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 ++ S + L T +++ + Y + Sbjct: 60 ----------------DKSARQYSQQGEGVNGNGILTDRVTPEQE--------VLYGESI 95 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + E L S+ K K L L Sbjct: 96 LKEEQGPELLDGQSDTSNIQQKYLG---------------------------KPLDSLLI 128 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 K+ S L + D E + ++I + + +F SS+ V++ + + Sbjct: 129 KLQSALIDEIRDGEA---SLELNQDWLIIEL---SSGMLFSSGSSVAHSRAKQVVKIVKD 182 Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 ++A + +RG+TD RN R NW LS+ RA S L G++ R+ I G+ Sbjct: 183 IIAPVDNYVRVRGYTDDESIRNEIFRSNWELSVARATSILVELEALGINSARM-AIEGYG 241 Query: 317 HHRLKIASDPM--NSANRRIDILV 338 + ++D + NR++ I + Sbjct: 242 QYSPFASNDTEQGRAENRKVVIAL 265 >gi|254477135|ref|ZP_05090521.1| OmpA/MotB [Ruegeria sp. R11] gi|214031378|gb|EEB72213.1| OmpA/MotB [Ruegeria sp. R11] Length = 278 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 115/310 (37%), Gaps = 58/310 (18%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 +WK+ YADF+T +MAFF++MW++NAT + +K + Y F P Sbjct: 27 AWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADY---------------FSPSIPLS 71 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 R S + + + + G+ + ++ Sbjct: 72 RVSGGGNGAFNGDSMFTEQIKPQNGT-------------------GASDTNPMDAQQAQG 112 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + G + + + L E +++++ + Sbjct: 113 DTGVQDDQEREQTDETFRALAEELNGRGGESMVSLE-----------------------M 149 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 + ++ T G++I + D +P+F + + P +++ + V I++ GH Sbjct: 150 AQHIITRVTDEGLVIELFDTETSPLFKEGTPEPTLLFRDIIEMVARVTGVVENNIAVGGH 209 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331 T + P W LS RA +L G RI +++G A +L A+ PM + N Sbjct: 210 TRSHPVVIANNPVWELSHARADMTRVMLESGGTKSKRIHRVTGHADRKLTDAN-PMAARN 268 Query: 332 RRIDILVEDR 341 RI+I++ + Sbjct: 269 NRIEIVLLRK 278 >gi|295132150|ref|YP_003582826.1| thrombospondin repeat-containing OmpA/MotB family outer hypothetical protein [Zunongwangia profunda SM-A87] gi|294980165|gb|ADF50630.1| thrombospondin repeat-containing OmpA/MotB family outer membrane protein [Zunongwangia profunda SM-A87] Length = 470 Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 95/310 (30%), Gaps = 28/310 (9%) Query: 45 MAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104 +A F+ + K F P S G+ + D + + Sbjct: 170 LAIFV---------ESKYKH---AFEPEMGQHFQHSAGLKFMFGGTDTDGDGIYDKNDEC 217 Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 T + + Q ++ + + C ++ +D C T Sbjct: 218 PETPGLPEFNGCPDSDGDGIQDSMDDCPNEAGLAEFNGCPDTDGDGVPDPEDDCPETPGL 277 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF------- 217 +N + + + + ++ T V D Sbjct: 278 AELNGCPDADGDGIPDNEDECPEEAGPEENNGCPYEDTDGDGVIDPEDDCPEVAGTVANN 337 Query: 218 --ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDA 274 ++ + + NT +FD + + E+ L I E++ I GHTD+ Sbjct: 338 GCPEPTVEVINELNEYSNTVLFDFNKATIRSESEKALNSIIEIMEEYPNTVFHIGGHTDS 397 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 N +LS +RA S Q L+ G+ +R++ G+ R + NR Sbjct: 398 V---GSDEYNLKLSKERAASVRQFLVDGGIPANRLTS-EGYGESRPIATNSTEAGRQENR 453 Query: 333 RIDILVEDRQ 342 R++I ++ + Sbjct: 454 RVEISLDKDK 463 >gi|300114849|ref|YP_003761424.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113] gi|299540786|gb|ADJ29103.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113] Length = 280 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 92/303 (30%), Gaps = 71/303 (23%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 + +W I AD M++LM+FF+++ + D K + K F Sbjct: 14 EERTGAPAWVITLADLMSLLMSFFVLLLSFSEMDVLKYKQVAGSM-----------KFAF 62 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 Q + K I + + + ++ + + + Q + Sbjct: 63 GVQREIKVKEPPKGTSIIAQEFSPGRPRPTPWNEIRQDTIDETKQTLDFSDAPIQDTEAE 122 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 + +D L +I L Sbjct: 123 VAELQD-------------------------------------------KLQHEIDEGL- 138 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 + ET + I+I I ++ F S+I E L KI +L Sbjct: 139 ----------ITIETIKDRIIIRIQEK---GSFPSGSAIFSREFKPALDKIRAILKKIEG 185 Query: 265 VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI 322 + + GHTD P + R NW LS RA S L+ +S R + G+A + Sbjct: 186 KLIVAGHTDDRPIQTSRFRSNWELSTARAVSVVHYLLATHEISPGRFV-LEGYADTQPLA 244 Query: 323 ASD 325 ++ Sbjct: 245 PNE 247 >gi|90423959|ref|YP_532329.1| OmpA/MotB [Rhodopseudomonas palustris BisB18] gi|90105973|gb|ABD88010.1| OmpA/MotB [Rhodopseudomonas palustris BisB18] Length = 283 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 110/322 (34%), Gaps = 60/322 (18%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K ++ ++G+W + +AD M +L FF+++ + D + + M Sbjct: 10 KKKPEEAGGHVGAWFVTFADLMGLLTGFFVMLVSFSHQDQYKLQIVAGSMREAFGVQM-- 67 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + I++ +K Q + ++ Sbjct: 68 ---------------DARYSGVIEKDGLPTRGKVKNVEHIAPDQATNRPSPDEGGGMAKL 112 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 K + S A++ + +++K Sbjct: 113 GTQLK--------------------------ADREFALASASLRQALQEMPEITEISKN- 145 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 V+FE T G+ + I+DQ PMF S +P T+++++K+ L Sbjct: 146 ---------------VMFEETPQGLNLQIVDQEGRPMFPDGSPLPYERTMLLVRKLAAPL 190 Query: 260 AHSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + ISI GHT ++ D+ + LS RA + Q+L G+ + ++G A Sbjct: 191 RATALRISIVGHTSSTGAPGRDDDDAFVLSWQRANTVRQILKGEGLPSSHVFAVTGKADS 250 Query: 319 RLKIASDPMNSANRRIDILVED 340 P+ +ANRR+ I + Sbjct: 251 EPLFPDAPLLAANRRVTITLMR 272 >gi|218528676|ref|YP_002419492.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4] gi|218520979|gb|ACK81564.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4] Length = 462 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 106/279 (37%), Gaps = 16/279 (5%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 T + G D ++ + ++ + L+++ Sbjct: 181 TDNPGALDSAASAPAEARLDARAQTAGSKPREPQKESAKDIARQSLSDAMRQAGVKLASA 240 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ---- 193 + S + + E E L + K L Sbjct: 241 EPMPLTVPSAEPAKPSAEAAPLAPPAEAKPAPPEPTLLAKAEAPPAKELAPAKELAAPAD 300 Query: 194 ------------DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 L +I+ + L V T G+LISI D+ N MF S Sbjct: 301 QAAKAAETAALSALKAEIARAVPSLPNGAPAPQVEVRRTGEGVLISITDEINYSMFGIGS 360 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + P P+ + L++I ++L + +RGHTD PFR+ DNWRLS RA A +L++ Sbjct: 361 AEPTPKVVKALERIAKILNSRPGRVVVRGHTDGRPFRSETYDNWRLSSARAQMASYMLVR 420 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 G+ E RI +I G+A + +IA++P + NRRI+IL+ Sbjct: 421 GGLDEARIDRIEGYADRQPRIANNPKAAENRRIEILLRG 459 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 77/241 (31%), Gaps = 14/241 (5%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + III K+ + ++ G+WKI ADFMT +MA FLVMW+IN+T + K+ I +YF Sbjct: 3 DRPHEIIIIKRHGDHEEGHHGGAWKIALADFMTAMMALFLVMWLINSTSKEQKQTIAEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 NP +T + ++ D + D ++ ++ ++ Sbjct: 63 NPVKLAEVTHDRKGVNDPQDTPNDPAPSGKGKGDGGNAEGKGDATGAPGSRARESALFQD 122 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN--------------YFL 175 L+ ++ + + Sbjct: 123 PYAVLAKLAAEAEAAGPEAASADASALEAGQPGVAGGETGRDPFDPLYWQVAALPRRRTD 182 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 P + + + + RL A+ S ++ + + P Sbjct: 183 NPGALDSAASAPAEARLDARAQTAGSKPREPQKESAKDIARQSLSDAMRQAGVKLASAEP 242 Query: 236 M 236 M Sbjct: 243 M 243 >gi|295704127|ref|YP_003597202.1| chemotaxis protein MotB [Bacillus megaterium DSM 319] gi|294801786|gb|ADF38852.1| chemotaxis protein MotB [Bacillus megaterium DSM 319] Length = 277 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 65/328 (19%), Positives = 122/328 (37%), Gaps = 62/328 (18%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 +++ + + SW + Y+D +T+L+A F+V++ +++ D K + + FN Sbjct: 3 RRRKRKHEEDHVDESWLLPYSDLLTLLLALFIVLFAMSSVDAQKFKNLSRAFNEAFV--- 59 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 G+ + Q+ Sbjct: 60 -GGTGVMEFQSL------------------------------------------------ 70 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q+SE + K + + + + L KE+ + ++ LQ + Sbjct: 71 QESEEAVQPSNTPAAKSTKKTNEVETAPNQSPASSQSLTSEQKEQTIREADQEELQQIQS 130 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 KI++ + N+ + T G+LISI D +FD + E + I E Sbjct: 131 KINAYIQK---KNLTNQLQTSLTEEGLLISIRDN---VLFDSGRAQVRSEDTKIANDISE 184 Query: 258 VLA-HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L I I GHTD P RN NW LS+ RA + +V++K+ + GF Sbjct: 185 LLVIDPPRNIIISGHTDNVPIRNAGFESNWELSVMRAVNFMKVILKNDKLSPSMFSAKGF 244 Query: 316 AHHRLKIASDPMN--SANRRIDILVEDR 341 + +++ + NRR++IL+ R Sbjct: 245 GEFKPVTSNNTAEGQAKNRRVEILITPR 272 >gi|218675467|ref|ZP_03525136.1| flagellar motor protein MotB [Rhizobium etli GR56] Length = 436 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 73/268 (27%), Positives = 130/268 (48%), Gaps = 5/268 (1%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 T + G ++P + K T + + ++ + + Sbjct: 170 TGADGGEAYRDPFDPDFWTKQVEVTTAGKTLPPGKSEQQPAENEATEVAKAEDMKPVPLA 229 Query: 138 QQSEHCKNSLTRDSEKGKDLCKS----TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 + K++ K+ D +K+ +++ K + ++KK Sbjct: 230 TDQKPAKDAKETKGAAETKEAKADGKVPDEKKAEAQKDADHQKDADKSAAASEQQKKEAD 289 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 L +I+ + G VA + +G+ G+L+SI DQ + MF+ S++P E ++ ++ Sbjct: 290 ALQAQIAQQI-GGVAGKLAEGLTVTAAEGGLLVSISDQNDDSMFNIGSAVPRQEMVLAME 348 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 +IG +L ++IRGHTD ++ +NWRLS+DRA SAY +L++ G+ E RIS++S Sbjct: 349 RIGTILKERGGAVAIRGHTDGRQYKGAQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVS 408 Query: 314 GFAHHRLKIASDPMNSANRRIDILVEDR 341 GFA RLK+ +DP N+ANRRI+ILV+ Sbjct: 409 GFADRRLKLPADPFNAANRRIEILVQAD 436 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 8/200 (4%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + + ++ II+K+ D + G+WKI YADFMT +MAFFLVMW++NA +++ Sbjct: 1 MSEGENHHHGRNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60 Query: 61 TKKAIEQYFNPFGKNLMTAS-----KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 TK A+ YFNP + K + D + ++ + + + E + D + Sbjct: 61 TKAAVATYFNPIKLADEKPTEKGLKKPVDDAEGEEKKEKSKQKEDNPTEGKSAADGDDQT 120 Query: 116 GSTNQK---KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 ++ + + EN L+ Q + +++ + G + Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRD 180 Query: 173 YFLPPLSKEKILAMKRKKRL 192 F P +++ K L Sbjct: 181 PFDPDFWTKQVEVTTAGKTL 200 >gi|319781670|ref|YP_004141146.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167558|gb|ADV11096.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 445 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 2/265 (0%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 G + + F Q ++ + E D + K + Sbjct: 178 GASYRDPFEPDFWSQQVAAPGAEASAQRTKIEGDPAKPGDKTAETQVLKVKAVPPVAAPL 237 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + + + E + P EK K Sbjct: 238 EPLAKDATSKQAANPATALAGETKPDGTKAAVAKAEPEAQKAVQPDIGEKAPTAAAVKAA 297 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D+ ++++ D + GV E T G++ISI DQ + MF+ S++P E ++ + Sbjct: 298 ADVKRQLADAFKPG--DKLHDGVSVEATDKGVVISITDQLDFGMFEVGSALPRRELVLAM 355 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +KIG ++ ISI GHTDA PFR+ + DNWRLS RA+SAY +L++ GV E RI+++ Sbjct: 356 EKIGRIVNSQKGTISINGHTDARPFRSDSYDNWRLSTARAHSAYYMLVRGGVDERRITEV 415 Query: 313 SGFAHHRLKIASDPMNSANRRIDIL 337 +GFA + KIA+DP+ +ANRRI+IL Sbjct: 416 AGFADRQPKIAADPLAAANRRIEIL 440 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 12/204 (5%) Query: 5 GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 + +Q + II+++ D ++ G WKI +ADFMT +M FFLVMW+INA ++ TK A Sbjct: 4 ANADQGRHEIIIVRRSHDDHDEAHHGGVWKIAFADFMTAMMCFFLVMWLINAANEQTKAA 63 Query: 65 IEQYFNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 + YFNP + ++ KG+ D + P D + + G++ +K+ Sbjct: 64 VASYFNPVKLVDRNSSRKGLEDLGDGPRAMGLTADDPQEATSKAGQNGNAGAGASERKQD 123 Query: 124 YQRLE-----------NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 Q + + LS ++++ + G + Sbjct: 124 KQEPQQAEHSDDHLFADPYAVLSEIATDTGVMQNVSQKGDGGVQAAGPATGASGGASYRD 183 Query: 173 YFLPPLSKEKILAMKRKKRLQDLA 196 F P +++ A + Q Sbjct: 184 PFEPDFWSQQVAAPGAEASAQRTK 207 >gi|15887914|ref|NP_353595.1| flagellar motor protein MotB [Agrobacterium tumefaciens str. C58] gi|15155508|gb|AAK86380.1| flagellar motor protein, PAL/OmpA family [Agrobacterium tumefaciens str. C58] Length = 433 Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 1/266 (0%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 T + G ++P + + + + + +++ E + + + Sbjct: 169 TGASGGEAYRDPFDPDFWTQQVKITRADQKQVPSEAAQAADGKQQDVAAKEADKSAEAVT 228 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 D + + ++ P + + ++ L + Sbjct: 229 LVQAGKPADKAEDGKSMEIAAVVPQQRPDAAEQAALAKPNPDQASKASDAEWEKADTLRE 288 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 +I +SG + + +G++ G+L++I DQ TPMF+ S++P E ++ ++KIG+ Sbjct: 289 EIEKQISG-ITGKLSEGLVVTPAEGGLLLTISDQAETPMFNIGSAVPRGELVLAMEKIGK 347 Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 +L + IRGHTD F+ A DNWRLS+DRA+SAY +L++ G+SE+R+ ++SGFA Sbjct: 348 LLQERGGSVVIRGHTDGRQFKGEANDNWRLSMDRAHSAYYMLVRGGLSEERVKQVSGFAD 407 Query: 318 HRLKIASDPMNSANRRIDILVEDRQG 343 RL++ S+P+ ANRRI+IL+E +G Sbjct: 408 RRLQVPSNPLADANRRIEILLEADRG 433 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 87/232 (37%), Gaps = 14/232 (6%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + + ++ II+K+ D + G+WKI YADFMT +MAFFLVMW++NA +++ Sbjct: 1 MSEGENHHHGKNEIIIVKRHKGGHDGAH-GGAWKIAYADFMTAMMAFFLVMWLVNAANEE 59 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH--------ITKNSVD 112 TK ++ YFNP + S ++ E Q K +I T + Sbjct: 60 TKASVASYFNPIKLSDEKPSSKGLEKPADKEEGVQKKDQSNIQAEKVTKGSAAATGEDLT 119 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + G + + EN L+ Q + +++ E G + Sbjct: 120 SQTGEQSNFSEADFFENPYSVLAEIAQQVGQQANVSAKGEGGAADSGPATGASGGEAYRD 179 Query: 173 YFLPPLSKEK-----ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 F P ++ + A ++ AD + V Sbjct: 180 PFDPDFWTQQVKITRADQKQVPSEAAQAADGKQQDVAAKEADKSAEAVTLVQ 231 >gi|319653376|ref|ZP_08007476.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2] gi|317394860|gb|EFV75598.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2] Length = 265 Score = 137 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 122/330 (36%), Gaps = 74/330 (22%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 ++K + SW + YAD +T+L+A F+V++ +++ D + + + FN Sbjct: 3 RRKKKQHHEEHVDESWLLPYADLLTLLLALFIVLFAMSSVDAQKFQKLSKAFNDVF---- 58 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + G+F+ +P D ++ ++ ++ Sbjct: 59 SGGTGVFEFPSPMPEGQMQSTDAV----------------------SEKPSKDLEEMAAM 96 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + E K D E L +L + Sbjct: 97 DELEKEKLKQAADQE--------------------------------------ELAELQQ 118 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 ++++ + N+ + T G+L+SI D +F S+ + + + +I E Sbjct: 119 RVNAFIEN---QNLADKLETSLTTEGLLVSIRDN---VLFGSGSAEVREQDLNMASEIAE 172 Query: 258 VL-AHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L I I GHTD P R + NW LS+ RA + ++++K+ + + GF Sbjct: 173 LLIMDPPRNIIISGHTDNVPIRNSSFESNWELSVMRAVNFMKIILKNDQLDPKWFSAKGF 232 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR++IL+ R G Sbjct: 233 GEFQPVAGNNTKEGRAKNRRVEILILPRTG 262 >gi|288942520|ref|YP_003444760.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM 180] gi|288897892|gb|ADC63728.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180] Length = 279 Score = 137 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 101/324 (31%), Gaps = 73/324 (22%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 D P W +AD M+++M FF+++ + D K + K Sbjct: 7 CPDPPAGAPEWMATFADLMSLMMCFFVLLLSFSEMDVIKYKQVAGSL-----------KA 55 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 F Q I + + + + +++ + + L + + Sbjct: 56 AFGVQRDIPAQEDPLGTSIIMQEFSPAQPQPTVINEVRQQTTDESKRFLEILDPAVEDAQ 115 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + +DL +++ Sbjct: 116 -----------------------------------------------DKAEDLKQELKKE 128 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ + + T ++I I ++ F +S+ L KI E L Sbjct: 129 IAEGL-------IEINTIDDQVVIRIREK---GSFPSASARIDTPFKAALMKIAEALNQV 178 Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320 I I GHTD P NW LS RA + + + G++ +R+ +I +R Sbjct: 179 EGRILIAGHTDDVPIETLEFPSNWVLSAARAAAVAHTMTQVGGIAPERV-EIRAHGDNRP 237 Query: 321 KIASDP--MNSANRRIDILVEDRQ 342 ++ + NRR++I+V + Sbjct: 238 VDTNETTDGRANNRRVEIIVLGER 261 >gi|86749921|ref|YP_486417.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] gi|86572949|gb|ABD07506.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] Length = 274 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 64/321 (19%), Positives = 115/321 (35%), Gaps = 70/321 (21%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 D + W + +AD M +L+AFF+V+ + D + + Sbjct: 12 KKKLDDEHTGHGWYVSFADLMGLLVAFFVVLVSYSTQDVKKLQIVAGSMR---------- 61 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 D +H + S ++ T + + + +N + S Sbjct: 62 ------------------DAFGVQHQARYSGAVETDGTPVQGRVAKTDNAALDQAGGAGS 103 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 S + S A++ L +L+K Sbjct: 104 -------------------------SAQAKAEREFALASASLRQALQDVPELSELSK--- 135 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 V+FE T TG+ + + DQ PMF SS+P T +++ K+ L Sbjct: 136 -------------NVVFEETPTGLNLELTDQDGRPMFADGSSVPYERTRLLIAKLAAPLR 182 Query: 261 HSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 ++ ++I GHT A+ N D++ LS RA + Q+L + G+S +R+ ++G Sbjct: 183 ATSLRVNIVGHTAATAVPANGDYDSFDLSTGRANAVRQILKREGLSSNRVMSVAGKGDGE 242 Query: 320 LKIASDPMNSANRRIDILVED 340 PM +ANRR+ I + Sbjct: 243 PLFPEAPMLAANRRVTISLLR 263 >gi|294498805|ref|YP_003562505.1| chemotaxis protein MotB [Bacillus megaterium QM B1551] gi|294348742|gb|ADE69071.1| chemotaxis protein MotB [Bacillus megaterium QM B1551] Length = 277 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 65/328 (19%), Positives = 123/328 (37%), Gaps = 62/328 (18%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 +++ + + SW + Y+D +T+L+A F+V++ +++ D K + + FN Sbjct: 3 RRRKRKHEEDHVDESWLLPYSDLLTLLLALFIVLFAMSSVDAQKFKNLSRAFNEAFV--- 59 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 G+ + Q+ Sbjct: 60 -GGTGVMEFQSL------------------------------------------------ 70 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q+SE + K + + + + + L KE+ + ++ LQ + Sbjct: 71 QESEEAVQPSNTPAAKSTEKTNEVETAPNQSPASSQSLTSEQKEQTIREADQEELQQIQS 130 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 KI++ + N+ + T G+LISI D +FD + E + I E Sbjct: 131 KINAYIKK---KNLTNQLQTSLTEEGLLISIRDN---VLFDSGRAQVRSEDTKIANDISE 184 Query: 258 VLA-HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L I I GHTD P RN NW LS+ RA + +V++K+ + GF Sbjct: 185 LLVIDPPRNIIISGHTDNVPIRNAGFESNWELSVMRAVNFMKVILKNDKLNPSMFSAKGF 244 Query: 316 AHHRLKIASDPMN--SANRRIDILVEDR 341 + +++ + NRR++IL+ R Sbjct: 245 GEFKPVTSNNTAEGQAKNRRVEILITPR 272 >gi|114762178|ref|ZP_01441646.1| chemotaxis protein MotB [Pelagibaca bermudensis HTCC2601] gi|114545202|gb|EAU48205.1| chemotaxis protein MotB [Roseovarius sp. HTCC2601] Length = 277 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 113/333 (33%), Gaps = 59/333 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + +IIK+K ++ G+WK+ YADF+T +MAFF++MW++NAT + +K + Y Sbjct: 4 DSSVAPVIIKRKKVSGGDGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADY 63 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F+P + G S + + + + + Sbjct: 64 FSPTIAISRVSGGGDGSLGGDSIFSENTLPRVGTGATSLRPTSQHAARGASDPGEAD--- 120 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + E ++ L + + +E + + E+ Sbjct: 121 ---EIGAQDEALEAVEDLLMGRGGESMISDTLMRHIVTRVTDEGLVVELFATEEAPLFDA 177 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + +L + +S ++G+ Sbjct: 178 QGAPTELLRALSGVIAGVSDM--------------------------------------- 198 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 T ++I GH A P +W +S A ++L+ G+S+ R Sbjct: 199 -------------VTNPLAIEGHVGAYPIVLARDPSWEVSTRHADRFRELLLADGLSKAR 245 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 I++++ A ++PM+ N R++I+ Sbjct: 246 INRVTAHADREP-AKNNPMDPRNTRLEIIFLRS 277 >gi|222147584|ref|YP_002548541.1| flagellar motor protein MotB [Agrobacterium vitis S4] gi|221734572|gb|ACM35535.1| flagellar motor protein [Agrobacterium vitis S4] Length = 444 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 5/257 (1%) Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 + + + +Q+ + Q Sbjct: 192 QTAQGKPGKAKPDEQQTVAEAAAKPDPFAQKPVDQQASAAAAAA----APDGAQGTPPSK 247 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 S + + + + + + + + + ++ L ++I+S + G Sbjct: 248 SQPEAKPQVEIDGQQVAIAVPKARPDPKQVAREEQNASADSDQTQQADQLKQQIASEI-G 306 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 VA + +G++ + G+LI++ DQ PMFD S++P E ++ ++KIG++LA Sbjct: 307 GVAGKLAEGLIVQPAEGGLLITLTDQSQAPMFDVGSAVPRKEMVLAMEKIGKLLAERQGA 366 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 + IRGHTDA ++ DNW LS+ RA+SAY +L++ G++++RI+++SGFA RL D Sbjct: 367 VVIRGHTDARQYKGPDNDNWGLSMSRAHSAYYMLVRGGLAQNRITQVSGFADRRLLKPED 426 Query: 326 PMNSANRRIDILVEDRQ 342 P+ +ANRRI+ILV+ Q Sbjct: 427 PLAAANRRIEILVQGDQ 443 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 87/238 (36%), Gaps = 8/238 (3%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + + ++ I+IK+ D + G+WKI YADFMT +MAFFLVMW++NA ++ Sbjct: 1 MSDAENHHHGKNEIIVIKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEK 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH--------ITKNSVD 112 T ++ YFNP ++ + ++K I T + Sbjct: 61 TTASVASYFNPIKLADEKPTEKGVKKPVDQAEGEESKERSKIKAEEETLGKAAATGEDMT 120 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 G + EN L+ Q + +++ E G + + Sbjct: 121 STSGDKPVYSEADLFENPYSVLAEIAQEVGQQANVSAKGEGGASESGPSTGASGGEAYRD 180 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 F P +++ + K ++ + + D + + + + D Sbjct: 181 PFDPDFWSQQMQTAQGKPGKAKPDEQQTVAEAAAKPDPFAQKPVDQQASAAAAAAAPD 238 >gi|320106352|ref|YP_004181942.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4] gi|319924873|gb|ADV81948.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4] Length = 284 Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 108/324 (33%), Gaps = 65/324 (20%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + P+ W + YADF+T+L AFF+V++ Sbjct: 2 RGKKKHAPHGHERWLVSYADFITLLFAFFVVLFA-------------------------G 36 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S+G +Q + Q + +K K + + + +++ Sbjct: 37 SRGDAKKQQLLAVAIQTAFAQGAFDAHSKTPALAPSAGAMGKPTPIAMPTPMTPEAAARK 96 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 ++ D ++ + +P ++ + + I Sbjct: 97 -------------------EAADKKRIYDALAQMAVPQKNQNLPPLGAKPPSPEKRGTAI 137 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S+ V F + G+++S+ D F+ S+ + I VL++I L Sbjct: 138 SA-------------VSFRSEPEGLVLSLQDA---GFFNSGSAALRADAIPVLERIAASL 181 Query: 260 AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + GHTD NW LS RA + +VL+ + ++G+A Sbjct: 182 --PMGPLRVEGHTDNVAIHTALYASNWELSTARANAIARVLLARSLVNPASLAVAGYAEF 239 Query: 319 RLKIASDPM--NSANRRIDILVED 340 ++ + NRR+DI++ Sbjct: 240 HPISSNSTEEGRAKNRRVDIVLLK 263 >gi|304311123|ref|YP_003810721.1| Flagellar motor protein MotB [gamma proteobacterium HdN1] gi|301796856|emb|CBL45068.1| Flagellar motor protein MotB [gamma proteobacterium HdN1] Length = 359 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 111/327 (33%), Gaps = 60/327 (18%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ +++ N W I YADF+T+L AFF+VM+ I++ +D + + Sbjct: 2 RRRELEEETVNHERWVISYADFITLLFAFFVVMYSISSVNDGKYRVLSDSLVDAF----- 56 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + ++ + IG + + Sbjct: 57 -------------------------QSASRTINPVSIGEKVATSGNFETAVELPVPGDFP 91 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 E K S+ + + + ++ L+K Sbjct: 92 SKEDYKYSVEGLFDDVEPGAARQGDH-----------------------QDQQTSALSKL 128 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 S L + V + +SI + +F +S+ + +L KI EV Sbjct: 129 SEEMASRLQVEIQNADVKVVQRSEWLEVSI---PSNVLFASASANLSADAARLLGKISEV 185 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + G TD P R NW LS RA + ++ + GV+ R++ I G+A Sbjct: 186 LKPADYSVQVEGFTDNVPIRTEQFPSNWELSAARAAAVVRLFVLGGVNPARLAAI-GYAD 244 Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342 R + NRRI+I+V + Sbjct: 245 QRALGDNATAEGRALNRRINIIVSTSK 271 >gi|39935962|ref|NP_948238.1| chemotaxis protein MotB2 [Rhodopseudomonas palustris CGA009] gi|39649816|emb|CAE28338.1| possible chemotaxis protein MotB2 [Rhodopseudomonas palustris CGA009] Length = 326 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 104/322 (32%), Gaps = 59/322 (18%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + + W + +AD M +L++FF+++ + D + + Sbjct: 55 KKKAEEAHATHGWFVTFADLMGLLVSFFVMLVSFSTQDLRKMQIVAGSMRDAFGVQQN-- 112 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 ++ I+ +K +Q + + + Sbjct: 113 ---------------SRFAGVIETDGVPVQGKVKSKMNVAPEQASNTPHLEESGGSGSAA 157 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 H K S A++ L +++K Sbjct: 158 SHAK--------------------------AEREFALASASLRQALQDVPELAEMSKN-- 189 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 V+FE T G+ + + DQ PMF S++P T ++ ++ L Sbjct: 190 --------------VVFEETPVGLNLELTDQDGRPMFPDGSAVPYERTRKLVARLAAPLR 235 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 ++ + I GHT A+ + D LS++RA + +VL + G+ ++ + G Sbjct: 236 ATSLRVIIVGHTAATVVQAGDDDPLSLSVNRANAVREVLKQEGLPSSQVLSLVGKGDGEP 295 Query: 321 KIASDPMNSANRRIDILVEDRQ 342 P +ANRR+ I + Sbjct: 296 LFPDAPALAANRRVTITLMREN 317 >gi|310816853|ref|YP_003964817.1| OmpA/MotB [Ketogulonicigenium vulgare Y25] gi|308755588|gb|ADO43517.1| OmpA/MotB [Ketogulonicigenium vulgare Y25] Length = 284 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 68/333 (20%), Positives = 119/333 (35%), Gaps = 68/333 (20%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 Q +Q IIIK+K + ++ G+WK+ YADF+T +MAFFL+MWIIN+ ++ + + + Sbjct: 16 QTGNQRIIIKRKKVVAGGGHHGGAWKVAYADFVTAMMAFFLLMWIINSITEEQRDGLANF 75 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F P S + V +GS Sbjct: 76 ---------------FATGTPVSTVSGGADGMFGGRDSQSQQVGPAVGSG---------- 110 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 +P Sbjct: 111 ---------------------------------------MDYITGRMPTARGASAAQSSD 131 Query: 189 KKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 L+D+A+ +S + LV D I + ++ T G++I + + P+F ++ P Sbjct: 132 ILALEDIARVLSGQSGESLVDDAIQRHIITRMTDEGLVIEVFSTPDAPVFQPGGTVLTPL 191 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 ++ ++Q I V A I++ H + W L+ RA + L +GV+ Sbjct: 192 SLAIIQMIASVAAQVENGIAVAAHLPQQ--AGTDQGAWALTAARADTIRAALEGAGVAPV 249 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVED 340 R+ +++G A DP N R++I V Sbjct: 250 RLRRVTGHADRSPI-TLDPTVQRNDRVEITVLR 281 >gi|45442813|ref|NP_994352.1| hypothetical protein YP_3056 [Yersinia pestis biovar Microtus str. 91001] gi|108809034|ref|YP_652950.1| hypothetical protein YPA_3043 [Yersinia pestis Antiqua] gi|150260228|ref|ZP_01916956.1| lateral flagellar proton motor protein B [Yersinia pestis CA88-4125] gi|162420691|ref|YP_001604823.1| hypothetical protein YpAngola_A0200 [Yersinia pestis Angola] gi|165924864|ref|ZP_02220696.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str. F1991016] gi|165939072|ref|ZP_02227624.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str. IP275] gi|166008977|ref|ZP_02229875.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str. E1979001] gi|166212177|ref|ZP_02238212.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str. B42003004] gi|167398344|ref|ZP_02303868.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419079|ref|ZP_02310832.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167466315|ref|ZP_02331019.1| flagellar motor protein B [Yersinia pestis FV-1] gi|170022980|ref|YP_001719485.1| hypothetical protein YPK_0731 [Yersinia pseudotuberculosis YPIII] gi|218927933|ref|YP_002345808.1| hypothetical protein YPO0747 [Yersinia pestis CO92] gi|229837433|ref|ZP_04457596.1| Flagellar motor rotation protein motB [Yersinia pestis Pestoides A] gi|229840644|ref|ZP_04460803.1| Flagellar motor rotation protein motB [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842804|ref|ZP_04462956.1| Flagellar motor rotation protein motB [Yersinia pestis biovar Orientalis str. India 195] gi|294502809|ref|YP_003566871.1| flagellar motor protein [Yersinia pestis Z176003] gi|45437679|gb|AAS63229.1| chemotaxis MotB protein [Yersinia pestis biovar Microtus str. 91001] gi|108780947|gb|ABG15005.1| putative chemotaxis membrane protein [Yersinia pestis Antiqua] gi|115346544|emb|CAL19421.1| putative chemotaxis membrane protein [Yersinia pestis CO92] gi|149289636|gb|EDM39713.1| lateral flagellar proton motor protein B [Yersinia pestis CA88-4125] gi|162353506|gb|ABX87454.1| flagellar motor protein B [Yersinia pestis Angola] gi|165913028|gb|EDR31653.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str. IP275] gi|165923064|gb|EDR40215.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str. F1991016] gi|165992316|gb|EDR44617.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str. E1979001] gi|166206923|gb|EDR51403.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str. B42003004] gi|166963073|gb|EDR59094.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050848|gb|EDR62256.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str. UG05-0454] gi|169749514|gb|ACA67032.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII] gi|229690071|gb|EEO82128.1| Flagellar motor rotation protein motB [Yersinia pestis biovar Orientalis str. India 195] gi|229697010|gb|EEO87057.1| Flagellar motor rotation protein motB [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705556|gb|EEO91566.1| Flagellar motor rotation protein motB [Yersinia pestis Pestoides A] gi|262360841|gb|ACY57562.1| flagellar motor protein [Yersinia pestis D106004] gi|262364786|gb|ACY61343.1| flagellar motor protein [Yersinia pestis D182038] gi|294353268|gb|ADE63609.1| flagellar motor protein [Yersinia pestis Z176003] Length = 303 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 65/336 (19%), Positives = 118/336 (35%), Gaps = 63/336 (18%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + IIK+ + G+WK+ +ADF +MA F+V+WI+ ++ ++ I Sbjct: 3 NHASGGATTIIKRANRKKHHVRHSGAWKVAFADFTLAMMALFMVLWIVGVVSEEERQEIV 62 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 N + I + N ID TK+++ +++ Sbjct: 63 AQLNGKTIFAQQSFISIPSKSKSGGGKLSNSIDGKEQAKETKSNLAIEVPEP-------- 114 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 E S E + + + T + + + +P + I Sbjct: 115 ---------EQSLEEVVDKSRHEMEELSRIIMQITSAYNAQSNLQMEVVPQGLRILIQDD 165 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 +++ Q + + TP F + P Sbjct: 166 QQRDMFQRSSAVL----------------------------------TPFFSRLLGELAP 191 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVS 305 I I GHTDAS +R+ +NW LS +RA A++ L+ G+ Sbjct: 192 AF-----------NEMDNKIIITGHTDASRYRDQLLYNNWNLSGERALMAHKALVNGGLD 240 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 E R+ +I+ A L +DP+ + NRRI+I+V + Sbjct: 241 EGRVLQINAMADQMLLDPTDPLAAKNRRIEIMVLTK 276 >gi|90422620|ref|YP_530990.1| flagellar motor protein MotB [Rhodopseudomonas palustris BisB18] gi|90104634|gb|ABD86671.1| OmpA/MotB [Rhodopseudomonas palustris BisB18] Length = 423 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 99/273 (36%), Gaps = 1/273 (0%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 K+ M + D +P L K + +L + Sbjct: 149 EATRKDGMKGGEAYRDPFDPISWPMAQTSPLDDKALGRKEAGNLPFDEAAAALSEGQGRR 208 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 ++ + + + P ++ Sbjct: 209 PSQGTPDATAAPQDAEPPKAAPASSEPQQDRPRPVGLFADDATKTGAPGNRPAGARGDTT 268 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 K ++ + L + V T G+LIS+ D N MF S+ P P Sbjct: 269 PAANAAGKLQATITAALATLGAARPVTEVRETTEGLLISLTDDVNYGMFATGSAAPSPGL 328 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + L KI ++A + + +RGHTD +R+ DNWRLS RA+ AY +L++ G+ R Sbjct: 329 VRALDKITPLIAQNRGQMIVRGHTDNRAYRSAEYDNWRLSTARAHMAYYMLIRGGLDAGR 388 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 I +I G+A R K +DP + NRRI++L+ Sbjct: 389 IERIEGYADRRPKDPNDPSAAPNRRIELLIRAP 421 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 5/203 (2%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 Q+ + III+++ ++D N G WKI YADFMT +MAFFLVMW+INAT+ +T++++ Sbjct: 2 AEQDRPELIIIRRRNSLDVEEKN-GVWKIAYADFMTAMMAFFLVMWLINATNPETRESVA 60 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKID---LSIDEHITKNSVDLKIGSTNQKKQ 123 YFNP T + + + ++ D + + + + Sbjct: 61 AYFNPIKLTDSTPDRKGIHDPRRVDPGKADEGDNERPHPEPDNAAQPAPRQQPEQSHPDE 120 Query: 124 YQRLENNIFYLSNSQQSEH-CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + LS + + KD K + + ++ + S Sbjct: 121 AALFRDPYAVLSEIAGGPPRAAQAGSAPEATRKDGMKGGEAYRDPFDPISWPMAQTSPLD 180 Query: 183 ILAMKRKKRLQDLAKKISSTLSG 205 A+ RK+ + ++ LS Sbjct: 181 DKALGRKEAGNLPFDEAAAALSE 203 >gi|116250495|ref|YP_766333.1| flagellar motor protein MotB [Rhizobium leguminosarum bv. viciae 3841] gi|115255143|emb|CAK06217.1| putative motility protein [Rhizobium leguminosarum bv. viciae 3841] Length = 443 Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats. Identities = 74/302 (24%), Positives = 125/302 (41%), Gaps = 20/302 (6%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 I Q G D D V++ Sbjct: 142 LAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRDPFDPDFWTKQVEVTTAGKPLP 201 Query: 122 KQYQRLENNIFYLSNSQQSEHCKN--------------------SLTRDSEKGKDLCKST 161 + + + E K + +S Sbjct: 202 PGKSDEQAVESETTEIAKLEDAKPIPLTTDQKAAQETKETKETKGAVGAKDGKTPGGRSP 261 Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + +K+ +++ K +++K+ + + + G VA + +G+ + Sbjct: 262 EDKKAEAQKDADHQKDADKSAAETEQQQKKEAEQLQAQIAQQIGGVAGKLAEGLTVTASE 321 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281 G+L+SI DQ + MF+ S++P E ++ ++KIG +L ++IRGHTD ++ Sbjct: 322 GGLLVSISDQTDDSMFNIGSAVPRQEMVLAMEKIGAILKERGGAVAIRGHTDGRQYKGTQ 381 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +NWRLS+DRA SAY +L++ G+ E RIS++SGFA RLK+ SDP N+ NRRI+ILV+ Sbjct: 382 NENWRLSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPSDPFNATNRRIEILVQAD 441 Query: 342 QG 343 QG Sbjct: 442 QG 443 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 77/200 (38%), Gaps = 8/200 (4%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + + ++ II+K+ D + G+WKI YADFMT +MAFFLVMW++NA +++ Sbjct: 1 MSEGENHHHGKNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL------- 113 TK ++ YFNP + ++ + + + E + Sbjct: 61 TKASVATYFNPIKLSDEKPTEKGLKKPVDNAEGEEKQEKSKQKEEDPNDGKAAADGDDQT 120 Query: 114 -KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 G + EN L+ Q + +++ + G + Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRD 180 Query: 173 YFLPPLSKEKILAMKRKKRL 192 F P +++ K L Sbjct: 181 PFDPDFWTKQVEVTTAGKPL 200 >gi|222084880|ref|YP_002543409.1| chemotaxis motility protein [Agrobacterium radiobacter K84] gi|221722328|gb|ACM25484.1| chemotaxis motility protein [Agrobacterium radiobacter K84] Length = 452 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 84/281 (29%), Positives = 136/281 (48%), Gaps = 2/281 (0%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + + Q N K A++ ++ ++ D + S K + Q Sbjct: 146 QQVGQQANVSAKGEGGAAQSGPATGADGGQAYRDPFDPDFWTKQVQVSSASKKANEEQAA 205 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + + + + + S +K +E SK+ Sbjct: 206 KSDQSAKGEVIALSKATAADSGEPTDKPQTPEDQPTLSDQRQKGQGADEKISSATQSKDI 265 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 +++ ++L + I + +SG VA + +GV + G+L++I DQ N PMF+ S+ Sbjct: 266 APPKDQQQSAKELQQAIQAEISG-VAGQLAEGVQVASAEGGLLVTISDQSNDPMFNIGSA 324 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK 301 +P E ++ + KIG++LA+ VI IRGHTD P+ DNWRLSLDRA SAY +L Sbjct: 325 VPRREMVLAMGKIGKILANRKGVILIRGHTDGRPYMVGGHNDNWRLSLDRAQSAYYMLTS 384 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +G+ E RI ++SGFA RLK+ +DP N ANRRI+IL+ED + Sbjct: 385 TGLDEKRIEQVSGFADRRLKLPNDPFNDANRRIEILIEDAK 425 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 9/205 (4%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 MN GD+NQ + II+K+ A + + G+WKI YADFMT +MAFFLVMW++NA +++ Sbjct: 1 MND-GDQNQGKHEIIIVKRHGANEHEGGHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 59 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 TK ++ YFNP ++ + +N+ +E N K G Sbjct: 60 TKASVASYFNPIKLADEKPTEKGLKKPVDQADGKKNEAKSQNEETNPNNGKSAKTGEDQT 119 Query: 121 K--------KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + EN L+ Q + +++ E G + Sbjct: 120 STSGDQTSYSEADFFENPYSVLAEIAQQVGQQANVSAKGEGGAAQSGPATGADGGQAYRD 179 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAK 197 F P +++ K+ + Sbjct: 180 PFDPDFWTKQVQVSSASKKANEEQA 204 >gi|241203119|ref|YP_002974215.1| flagellar motor protein MotB [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857009|gb|ACS54676.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 443 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 76/302 (25%), Positives = 120/302 (39%), Gaps = 20/302 (6%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 I Q G D D V++ Sbjct: 142 LAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRDPFDPDFWTKQVEVTTAGKPLP 201 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + + E K +K K T K + ++ P Sbjct: 202 PGKSDDQAVESETTEIAKLEDAKPIPLTTDQKAAQETKETKETKGAVEAKDGKTPGGKSP 261 Query: 182 KILAMKRKKRLQDLAKKISSTLS--------------------GLVADNIVKGVLFETTR 221 + + +K S G VA + +G+ + Sbjct: 262 EDKKAEAQKDADHQKDADKSAAETEQQQQKEAEQLQAQIAQQIGGVAGKLAEGLTVTASE 321 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281 G+L+SI DQ + MF+ S++P E ++ ++KIG +L +++RGHTD ++ Sbjct: 322 GGLLVSISDQTDDSMFNIGSAVPRQEMVLAMEKIGAILKERGGAVAVRGHTDGRQYKGTQ 381 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +NWRLS+DRA SAY +L++ G+ E RIS++SGFA RLK+ SDP N+ NRRI+ILV+ Sbjct: 382 NENWRLSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPSDPFNATNRRIEILVQAD 441 Query: 342 QG 343 QG Sbjct: 442 QG 443 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 8/200 (4%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + + ++ II+K+ D + G+WKI YADFMT +MAFFLVMW++NA +++ Sbjct: 1 MSEGENHHHGKNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-----SVDLKI 115 TK ++ YFNP + ++ + + + E + D + Sbjct: 61 TKASVATYFNPIKLSDEKPTEKGLKKPVDNAEGEEKQEKSKQKEEDPNDGKAAADGDDQT 120 Query: 116 GSTNQK---KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 ++ + + EN L+ Q + +++ + G + Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRD 180 Query: 173 YFLPPLSKEKILAMKRKKRL 192 F P +++ K L Sbjct: 181 PFDPDFWTKQVEVTTAGKPL 200 >gi|146306332|ref|YP_001186797.1| flagellar motor protein MotB [Pseudomonas mendocina ymp] gi|145574533|gb|ABP84065.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 296 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 103/322 (31%), Gaps = 59/322 (18%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 ++ + +W + +AD M++LM FF+++ + D K I Sbjct: 4 PEEEARAMPAWVMTFADLMSLLMCFFVLLLSFSEIDAQRFKQIAGEL-----------AK 52 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 F Q + + + + +++ Sbjct: 53 AFGVQREVPALEVPLGTSPVFDKFSPGKPEPTEVQEIRQQTT------------------ 94 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + D + + + E + + + + L + + Sbjct: 95 -----------------TQDPQLDTLRGDAEAELQARAEAQVDQQVRDSVAALQQLLQGE 137 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 LS + + I+ F S+ P +L + E+L Sbjct: 138 LSEGRLQLLEERRRI----------ILRVEERGSFASGSAELTPAFEDMLLGMSELLVEI 187 Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ GHTD P R NW LS RA + L+ + E + ++ GFA R + Sbjct: 188 PGTLTVEGHTDDVPISTARFRSNWDLSAARASAVANALLLNPALEPQRLEVKGFADTRPR 247 Query: 322 IASDPM--NSANRRIDILVEDR 341 +A+D + NRR++I+++ Sbjct: 248 VANDSAQQRALNRRVEIIIDQS 269 >gi|99082778|ref|YP_614932.1| OmpA/MotB [Ruegeria sp. TM1040] gi|99039058|gb|ABF65670.1| Chemotaxis motB protein (Motility protein B) [Ruegeria sp. TM1040] Length = 279 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 119/310 (38%), Gaps = 57/310 (18%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 +WK+ YADF+T +MAFFL+MW++NAT + +K + YF+P + Sbjct: 27 AWKVAYADFVTAMMAFFLLMWLLNATTEKQRKGLADYFSPSIPLSRVSG----------- 75 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 G+ + E+ E+ ++ Sbjct: 76 -----------------------GGNGAFQGDTMFTEDVKPQNGVGATKENPTDASRAQG 112 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 E G + +D +++++ + +V+ ++ Sbjct: 113 ETGVADDQQSD--------------------AAEEASFRQIEEAL--MGRGGESMVSIDM 150 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 + ++ T G++I + + + +F+ S P +L+ + V + ++I GH Sbjct: 151 ARHIVTRVTDEGLIIELFETEDATLFEADSERPTVLMRDLLRMVARVTSGVENNVAIGGH 210 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331 ++P W LS RA ++L G+S RIS+++GFA + +PM+ N Sbjct: 211 VASTPVVIANNPVWALSHARADQTRELLQAGGMSAKRISRVTGFADRD-LASQNPMSERN 269 Query: 332 RRIDILVEDR 341 RI I + + Sbjct: 270 NRITITLLRK 279 >gi|192291615|ref|YP_001992220.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1] gi|192285364|gb|ACF01745.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1] Length = 285 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 104/322 (32%), Gaps = 59/322 (18%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + + W + +AD M +L++FF+++ + D + + Sbjct: 14 KKKAEEAHATHGWFVTFADLMGLLVSFFVMLVSFSTQDLRKMQIVAGSMRDAFGVQQN-- 71 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 ++ I+ +K +Q + + + Sbjct: 72 ---------------SRFAGVIETDGVPVQGKVKSKMNVAPEQASNTPHLEESGGSGSAA 116 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 H K S A++ L +++K Sbjct: 117 SHAK--------------------------AEREFALASASLRQALQDVPELAEMSKN-- 148 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 V+FE T G+ + + DQ PMF S++P T ++ ++ L Sbjct: 149 --------------VVFEETPVGLNLELTDQDGRPMFPDGSAVPYERTRKLVARLAAPLR 194 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 ++ + I GHT A+ + D LS++RA + +VL + G+ ++ + G Sbjct: 195 ATSLRVIIVGHTAATVVQAGDDDPLSLSVNRANAVREVLKQEGLPSSQVLSLVGKGDGEP 254 Query: 321 KIASDPMNSANRRIDILVEDRQ 342 P +ANRR+ I + Sbjct: 255 LFPDAPALAANRRVTITLMREN 276 >gi|86750474|ref|YP_486970.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] gi|86573502|gb|ABD08059.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] Length = 273 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 99/322 (30%), Gaps = 64/322 (19%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN-PFGKNLMTA 79 + + W + +AD M +L+AFF+++ + D D K + FG Sbjct: 3 KKKREEAHGGHGWFVTFADLMALLLAFFVMLTAFSTQDKDKLKVVAGSMREAFGVQSDAR 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 GI + P R + E T ++ Sbjct: 63 YSGIIENDGLPTRGKVKNTEHVNPELSTAKPSPGEVSKDEG------------------- 103 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 I+ +E S A++ + +L+K + Sbjct: 104 ---------------------------IHTKEEREFALASASLRQALQDMPEISELSKNV 136 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + +G+ E D P T +LQ + L Sbjct: 137 M-------FEETKQGLNLEIMDQDGRAMFADGSKAPF---------ERTRRLLQSLAGPL 180 Query: 260 AHSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I+I GHT A + N + LS DRA + Q+L + GV ++G + Sbjct: 181 RATPLRITIAGHTSAGLMPARSDYNGFDLSADRANAVRQILEREGVPTSHFFAVTGRSDT 240 Query: 319 RLKIASDPMNSANRRIDILVED 340 + DP +ANRR+ I + Sbjct: 241 QPLFPEDPAIAANRRVTITLMR 262 >gi|186896751|ref|YP_001873863.1| hypothetical protein YPTS_3453 [Yersinia pseudotuberculosis PB1/+] gi|186699777|gb|ACC90406.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+] Length = 303 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 65/336 (19%), Positives = 119/336 (35%), Gaps = 63/336 (18%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + IIK+ + G+WK+ +ADF +MA F+V+WI+ ++ ++ I Sbjct: 3 NHASGGATTIIKRANRKKHHVRHSGAWKVAFADFTLAMMALFMVLWIVGVVSEEERQEIV 62 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 N + I + N ID + TK+++ +++ Sbjct: 63 AQLNGKTIFAQQSFISIPSKSKSGGGKLSNSIDGNEQAKETKSNLAIEVPEP-------- 114 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 E S E + + + T + + + +P + I Sbjct: 115 ---------EKSLEEVVDKSRHEMEELSRIIMQITSAYNAQSNLQMEVVPQGLRILIQDD 165 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 +++ Q + + TP F + P Sbjct: 166 QQRDMFQRSSAVL----------------------------------TPFFSRLLGELAP 191 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVS 305 I I GHTDAS +R+ +NW LS +RA A++ L+ G+ Sbjct: 192 AF-----------NEMDNKIIITGHTDASRYRDQLLYNNWNLSGERALMAHKALVNGGLD 240 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 E R+ +I+ A L +DP+ + NRRI+I+V + Sbjct: 241 EGRVLQINTMADQMLLDPTDPLAAKNRRIEIMVLTK 276 >gi|327193053|gb|EGE59965.1| chemotaxis motility protein [Rhizobium etli CNPAF512] Length = 440 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 129/267 (48%), Gaps = 4/267 (1%) Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + D +P + Q ++ + S + + + ++ + Sbjct: 174 GGEAYRDPFDPDFWTKQVEVTTAGKTLPPGKSEEQATEGAATEVAKAEDTKPVPLATDQK 233 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL----PPLSKEKILAMKRKKRLQD 194 ++ K S K+TD + K+ + +R+K+ D Sbjct: 234 PAKDAKESKETKGAPETKGGKATDGKAPDEKKAEAEKNADHQKDADNSAAETERQKKEAD 293 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 ++ + G VA + +G+ + G+L+SI DQ + MF+ S++P E ++ +++ Sbjct: 294 ELQQQIAQQIGGVAGKLAEGLTVTASEGGLLVSISDQNDDSMFNIGSAVPRQEMVLAMER 353 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 IG +L ++IRGHTD ++ +NWRLS+DRA SAY +L++ G+ E RIS++SG Sbjct: 354 IGTILKERGGAVAIRGHTDGRQYKGGQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVSG 413 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDR 341 FA RLK+ +DP N+ANRRI+ILV+ Sbjct: 414 FADRRLKLPADPFNAANRRIEILVQAD 440 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 8/200 (4%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + + ++ II+K+ D + G+WKI YADFMT +MAFFLVMW++NA +++ Sbjct: 1 MSEGENHHHGRNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60 Query: 61 TKKAIEQYFNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL------ 113 TK A+ YFNP + KG+ + E + + +++ T+ Sbjct: 61 TKAAVATYFNPIKLADEKPTEKGLKKPVDHAEGEEKKEKSKQKEDNPTEGKSAADGDDQT 120 Query: 114 -KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 G + EN L+ Q + +++ + G + Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRD 180 Query: 173 YFLPPLSKEKILAMKRKKRL 192 F P +++ K L Sbjct: 181 PFDPDFWTKQVEVTTAGKTL 200 >gi|299133623|ref|ZP_07026817.1| OmpA/MotB domain protein [Afipia sp. 1NLS2] gi|298591459|gb|EFI51660.1| OmpA/MotB domain protein [Afipia sp. 1NLS2] Length = 275 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 105/322 (32%), Gaps = 61/322 (18%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + W + +AD M ++M+FF+++ + T Sbjct: 3 KKKRGEAHAGGHGWFVTFADLMGLMMSFFVMLVAFS------------------NQDQTK 44 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 K + + + I+ LK ++ + Sbjct: 45 LKIVAGSMREAFGVANARYSGVIETDGLPTRPKLKNVDHIPPEEASNTPSPDE------- 97 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 K + + S A++ + +L+K I Sbjct: 98 -------------------KEQAKLYGARIKTDREFALASASLRQALQDMPEMTELSKHI 138 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 FE T+ G+ + I+DQ MF + S P T ++++K+ L Sbjct: 139 M----------------FEETKQGLNLEIVDQDGRSMFAEGSREPYERTRMLIRKLAAPL 182 Query: 260 AHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 S ++I GHT + D + LS DRA + Q+L ++G+ I +SG A Sbjct: 183 RQSPLRVAIVGHTSSDFTSPRPGYDAFDLSADRANAVRQILERAGLPSTHIFSVSGKADS 242 Query: 319 RLKIASDPMNSANRRIDILVED 340 DP +ANRR+ I + Sbjct: 243 EPLFPDDPSLAANRRVTITLMR 264 >gi|328542461|ref|YP_004302570.1| OmpA family protein [polymorphum gilvum SL003B-26A1] gi|326412208|gb|ADZ69271.1| OmpA family protein [Polymorphum gilvum SL003B-26A1] Length = 283 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 110/320 (34%), Gaps = 51/320 (15%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 + W + +AD M++L+ FF+++ + D + + + Sbjct: 3 KKKQQSSGAPEWLVTFADLMSLLVCFFVLIISFSIQDREKMQVVAGSMR----------- 51 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 D + ++ + ++I + + + L + +E Sbjct: 52 -----------------DAFGVKESSRRTGIIEIEGIPIRDYMKHVTQVPQELDSDFAAE 94 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + + E D+EKS + A + + +++ I Sbjct: 95 RHEKKSKQGPEANTHDTVEADIEKSRQ------FATAAASLRQAFQEMPEITEISSNI-- 146 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + E T G+ I I+DQ MF + S P T +L K+ VLA Sbjct: 147 --------------IMEETEEGLNILIVDQDGRSMFREGSKYPYETTRRLLAKMAPVLAE 192 Query: 262 STEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 I I GHT W LS DRA A +L + G+ D+I + G A Sbjct: 193 MPNRIQITGHTTTGGTTADPSYTGWELSSDRANIARMILTEYGIPADQIHSVVGKADSEP 252 Query: 321 KIASDPMNSANRRIDILVED 340 +DP +ANRRI IL+ Sbjct: 253 LFPNDPFLAANRRIGILLMS 272 >gi|206889281|ref|YP_002248656.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741219|gb|ACI20276.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM 11347] Length = 213 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 9/151 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 +D K I L L+ D + ++ GI+I++ D +F S+ PE+ L Sbjct: 69 EDRNKAIIEDLRKLLNDISG--INIKSDARGIVITLPDSL---LFSSGSAELKPESTDAL 123 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 +I E L ++I GHTD P + + NW LS RA S L++ G+S DR Sbjct: 124 TRIAEKLKELPGKVAIEGHTDNIPISSSVYKSNWELSAARASSVLHFLLQRGLSPDRFL- 182 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVED 340 I+G+ ++ +D + NRR+++++ Sbjct: 183 IAGYGEYKPVATNDTDEGRAKNRRVELIILR 213 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 30/72 (41%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K ++ N+ W I Y+DF+T+L FF+ ++ +++ D + + K + Sbjct: 4 RKRNNNNEEENVHRWLISYSDFLTLLFTFFVALYALSSVDVTKAEKMTSSLRKVFKVIDE 63 Query: 79 ASKGIFDEQNPP 90 D Sbjct: 64 PVSFEEDRNKAI 75 >gi|325291956|ref|YP_004277820.1| flagellar motor protein MotB [Agrobacterium sp. H13-3] gi|27763656|gb|AAO20254.1| MotB [Agrobacterium sp. H13-3] gi|325059809|gb|ADY63500.1| flagellar motor protein MotB [Agrobacterium sp. H13-3] Length = 428 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 8/289 (2%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 I Q G D S D V + Q Sbjct: 141 LAEIAQQVGQQANVSAKGEGGAADSGPATGASGGEAYRDPFDPDFWTQQVKITRADQQQN 200 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS-- 179 Q+ ++ +E ++ G D K+ ++ + ++ + Sbjct: 201 PVEQQQSAENKQQDPAKDNEAVAAKSSQQPVDGADHGKAMEIAAVVPQQRPGAAEQAALT 260 Query: 180 -----KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 +++ +K+ ++L ++I +SG ++ + +G++ G+L++I DQ T Sbjct: 261 QPQPEQQQQGTAAQKEEAKELREEIEKQISG-ISGKLAEGLVVTPAEGGLLLTISDQTET 319 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 PMF+ S++P E ++ ++KIG++L + IRGHTD F+ A DNWRLS+DRA+S Sbjct: 320 PMFNVGSAVPRGEMVLAMEKIGKLLQERGGSVVIRGHTDGRQFKGEANDNWRLSMDRAHS 379 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 AY +L++ G+SE+R+ ++SGFA RL++ +DP+ +ANRRI+IL+E +G Sbjct: 380 AYYMLVRGGLSEERVKQVSGFADRRLQVPADPLANANRRIEILLEADRG 428 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 95/232 (40%), Gaps = 9/232 (3%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + + ++ II+K+ D + G+WKI YADFMT +MAFFLVMW++NA +++ Sbjct: 1 MSEGENHHHGKNEIIIVKRHKGGHDGAH-GGAWKIAYADFMTAMMAFFLVMWLVNAANEE 59 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH--------ITKNSVD 112 TK ++ YFNP + S ++ E + K +I T + Sbjct: 60 TKASVASYFNPIKLSDEKPSSKGLEKPVDKEEGVEKKDQSNIKAEKVTQGSAAATGEDLT 119 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + G + + EN L+ Q + +++ E G + Sbjct: 120 SQTGEQSNFSEADFFENPYSVLAEIAQQVGQQANVSAKGEGGAADSGPATGASGGEAYRD 179 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 F P +++ + ++ + ++ S+ + V ++++ + Sbjct: 180 PFDPDFWTQQVKITRADQQQNPVEQQQSAENKQQDPAKDNEAVAAKSSQQPV 231 >gi|218133672|ref|ZP_03462476.1| hypothetical protein BACPEC_01541 [Bacteroides pectinophilus ATCC 43243] gi|217991047|gb|EEC57053.1| hypothetical protein BACPEC_01541 [Bacteroides pectinophilus ATCC 43243] Length = 266 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 102/324 (31%), Gaps = 70/324 (21%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K+ + +W ++D M +L+ FF++++ ++ +P + Sbjct: 3 KIKKREEKGGGAAWMNTFSDLMNLLLCFFVMLFAMS--------------DPNQEKFQQL 48 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S + + S + D + +L Sbjct: 49 SASLASTFSIFNAGSISMGDGVLIGSGASQLNEL-------------------------- 82 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 ++ + + ++ LQ+ Sbjct: 83 ---------------------AIYYNNMGMNSEGEITQEEIKDAAQQIQEAGLQESEHMA 121 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L + + V + T +++++ + +FD S E + +L K+ +L Sbjct: 122 ENIEKQLEQNMLSDDVEVKATSKYVMLNLN---SGILFDSGKSELKTEAVTLLDKVSSIL 178 Query: 260 AHST-EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316 +I+I GHTD +P N DN LSL RAYS + L G + +G Sbjct: 179 WEYNDNMIAIEGHTDNNPIHNSKYPDNTMLSLYRAYSVFTYLTDQKGFDASTMLA-TGRG 237 Query: 317 HHRLKIASDPM--NSANRRIDILV 338 ++ + NRR++I + Sbjct: 238 ESVPIASNATAEGRAQNRRVEIKI 261 >gi|190890377|ref|YP_001976919.1| chemotaxis motility protein [Rhizobium etli CIAT 652] gi|190695656|gb|ACE89741.1| chemotaxis motility protein [Rhizobium etli CIAT 652] Length = 440 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 4/267 (1%) Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + D +P + Q ++ + S + + + ++ + Sbjct: 174 GGEAYRDPFDPDFWTKQVEVTTAGKALPPGKSAEQATEGAATEVAKAEDMKPVPLATDQK 233 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDL----EKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 ++ K S K+TD EK + E+N + + +R+K D Sbjct: 234 PAKDAKESKETKGAPETKGGKTTDGKAPDEKKVEAEKNADHQKDADKSADETERQKTEAD 293 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 ++ + G VA + +G+ + G+L+SI DQ + MF+ S++P E ++ +++ Sbjct: 294 ELQQQIAQQIGGVAGKLAEGLTVTASEGGLLVSISDQNDDSMFNIGSAVPRQEMVLAMER 353 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 IG +L ++IRGHTD ++ +NWRLS+DRA SAY +L++ G+ E RIS++SG Sbjct: 354 IGTILKERGGAVAIRGHTDGRQYKGGQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVSG 413 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDR 341 FA RLK+ +DP N+ANRRI+ILV+ Sbjct: 414 FADRRLKLPADPFNAANRRIEILVQAD 440 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 8/200 (4%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + + ++ II+K+ D + G+WKI YADFMT +MAFFLVMW++NA +++ Sbjct: 1 MSEGENHHHGRNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60 Query: 61 TKKAIEQYFNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL------ 113 TK A+ YFNP + KG+ + E + + +++ T+ Sbjct: 61 TKAAVATYFNPIKLADEKPTEKGLKKPVDHAEGEEKKEKSKQKEDNPTEGKSAADGDDQT 120 Query: 114 -KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 G + EN L+ Q + +++ + G + Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAADSGPATGADGGEAYRD 180 Query: 173 YFLPPLSKEKILAMKRKKRL 192 F P +++ K L Sbjct: 181 PFDPDFWTKQVEVTTAGKAL 200 >gi|163758026|ref|ZP_02165114.1| flagellar motor protein [Hoeflea phototrophica DFL-43] gi|162284315|gb|EDQ34598.1| flagellar motor protein [Hoeflea phototrophica DFL-43] Length = 411 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 80/291 (27%), Positives = 136/291 (46%), Gaps = 6/291 (2%) Query: 55 NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSS-----QNKIDLSIDEHITKN 109 + + + YF L ++ + N ++ + ++ Sbjct: 119 STAGEKQDYSEADYFENPYSVLAEIAQETGTQTNVSDKGDGGAAQSGPATGASGGEAYRD 178 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 D S + +K LE + + + D E +D + ++ Sbjct: 179 PFDPDFWSKSVEKDSDTLEESQSMFEVETFANNRLPESPVDKEPLQDPTDADGPAGDLSA 238 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + + +++ L + I L G + + +G++ E G+L+SI Sbjct: 239 QMAGDGGTGALTPEQLLEQLAEADVLKEDIMKALGGAL-GKLAEGLVVEPAEGGLLVSIT 297 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 DQ + MF+ S++P + ++ ++KIGEVLA I+IRGHTDA PF + DNWRLSL Sbjct: 298 DQLDFGMFNVGSAVPGRDLVIAMEKIGEVLAERDGAIAIRGHTDARPFASDTDDNWRLSL 357 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 RA+SAY +L++ G+SE+RIS++SGFA RLK +P++ NRRI+ILVE Sbjct: 358 ARAHSAYYMLVRGGLSEERISQVSGFADRRLKDPDNPLSEVNRRIEILVEA 408 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 81/210 (38%), Gaps = 8/210 (3%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +Q ++ II+K++ D ++ G WKI YADFMT +MAFFLVMW++NA++++TK AI Sbjct: 6 HQGKNEIIIVKRRGGGGDDGHHGGVWKIAYADFMTAMMAFFLVMWLVNASNEETKAAIAS 65 Query: 68 YFNPFGKNLMTA--------SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119 YFNP K E P+ ++ + + + G Sbjct: 66 YFNPIKLMDDKPADKGIKQVGKSAEGEATAPKSKTEGDESTTGQAGEAGSQKNSTAGEKQ 125 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + EN L+ Q + +++ + G + F P Sbjct: 126 DYSEADYFENPYSVLAEIAQETGTQTNVSDKGDGGAAQSGPATGASGGEAYRDPFDPDFW 185 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + ++ + + + + Sbjct: 186 SKSVEKDSDTLEESQSMFEVETFANNRLPE 215 >gi|86356325|ref|YP_468217.1| flagellar motor protein MotB [Rhizobium etli CFN 42] gi|86280427|gb|ABC89490.1| chemotaxis motility protein [Rhizobium etli CFN 42] Length = 436 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 130/262 (49%) Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + D +P + Q ++ + K+ T + + + ++ Sbjct: 174 GGQAYRDPFDPDFWTKQVEVTTAGKPLPGKSEGQAAESETTEIAKAEDMKPVPLATDQKP 233 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 E + +++ GK EK+ ++ + +++K+ + + Sbjct: 234 AKEVKETMGVAEAKDGKVTDGKAPEEKTAEARKDAEHQKEADRDAAGAEQQKKEAEQLQA 293 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + G VA + +G+ G+L+SI DQ + MF+ S++P E ++ ++KIG + Sbjct: 294 QIAQQIGGVAGKLAEGLTVTAAEGGLLVSISDQNDDSMFNIGSAVPRQEMVLAMEKIGTI 353 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 L ++IRGHTD ++ +NWRLS+DRA SAY +L++ G++E R+S++SGFA Sbjct: 354 LKERGGAVAIRGHTDGRQYKGGQNENWRLSMDRAQSAYYMLVRGGLNETRVSQVSGFADR 413 Query: 319 RLKIASDPMNSANRRIDILVED 340 RLK+ +DP N+ANRRI+ILV+ Sbjct: 414 RLKLPADPFNAANRRIEILVQA 435 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 86/226 (38%), Gaps = 8/226 (3%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + + ++ II+K+ D + G+WKI YADFMT +MAFFLVMW++NA +++ Sbjct: 1 MSDGENHHHGRNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60 Query: 61 TKKAIEQYFNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL------ 113 TK A+ YFNP + KG+ + E + + +++ T+ Sbjct: 61 TKAAVATYFNPIKLADEKPTEKGLKKPVDHAEGEEKKEKSKQKEDNPTEGKSAADGDDQT 120 Query: 114 -KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 G + EN L+ Q + +++ + G + Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAADSGPATGADGGQAYRD 180 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 F P +++ K L ++ ++ Sbjct: 181 PFDPDFWTKQVEVTTAGKPLPGKSEGQAAESETTEIAKAEDMKPVP 226 >gi|254706492|ref|ZP_05168320.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10] Length = 284 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 4/236 (1%) Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 +L + + Q + + ++ ++ + S DL + Sbjct: 49 AELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGDLTPPAPQT 108 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK----GVLFETTRTGILI 226 P + A +++ + DL K + + V G++I Sbjct: 109 VPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVVPVEGGVMI 168 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 + D+ + MF S+ P + +L++I +V+A + I GHTDA PF++ DN R Sbjct: 169 QLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFKSATYDNRR 228 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 LS RA AY +L++ G+ E R+ ++ G+A K +DP + NRRIDI ++ + Sbjct: 229 LSSARAQMAYYMLVRGGLDEKRVLRVEGYADRHPKNPNDPNAAENRRIDIFIKSKP 284 >gi|13472587|ref|NP_104154.1| flagellar motor protein MotB [Mesorhizobium loti MAFF303099] gi|14023333|dbj|BAB49940.1| flagellar motor protein; MotB [Mesorhizobium loti MAFF303099] Length = 471 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 13/283 (4%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 Y +PF + + + +R L + ++ V Sbjct: 186 ASYRDPFEPDFWSQQVAAPAAEASAQRPKIEGDPLKPGDKAAESQVAKVKAVPPAPPVKD 245 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS------ 179 + + K T+ S K+ D + +K + Sbjct: 246 APLEPLAESGKDAAATMAKAGETKASGAKASDAKTGDAKTEDSKAVAAAKADTAAAAQET 305 Query: 180 -----KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 EK K D+ ++++ D + GV E T G++ISI DQ + Sbjct: 306 AAPEAGEKPPTAAAVKAAADVKQQLADAFKPG--DKLHDGVSVEATDKGVVISITDQLDF 363 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 MF+ S++P E ++ ++KIG ++ ISI GHTDA PFR+ + DNWRLS RA+S Sbjct: 364 GMFEVGSAVPSRELVLAMEKIGRIVNSQKGTISINGHTDARPFRSASYDNWRLSTARAHS 423 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 AY +L++ GV E RI++++GFA + K +DP+++ANRRI+IL Sbjct: 424 AYYMLVRGGVDERRITEVAGFADRQPKDPADPLSAANRRIEIL 466 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 9/197 (4%) Query: 6 DKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAI 65 D + + II+++ D ++ G WKI +ADFMT +M FFLVMW+INA ++ TK A+ Sbjct: 15 DADHGRHEIIIVRRAHDDHDEGHHGGVWKIAFADFMTAMMCFFLVMWLINAANEQTKAAV 74 Query: 66 EQYFNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 YFNP + ++ KG+ D + P + + GS++ KK Sbjct: 75 ASYFNPVKLVDRNSSRKGLEDLGDGPSAIGSTADKPQQTKAKPGQAGSGDAGSSDAKKDK 134 Query: 125 QRLE--------NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 Q+ + + LS ++++ + G + F P Sbjct: 135 QQPQQTDDHLFADPYAVLSEIATDTGVMQNVSQKGDGGAQSAGPATGASGGASYRDPFEP 194 Query: 177 PLSKEKILAMKRKKRLQ 193 +++ A + Q Sbjct: 195 DFWSQQVAAPAAEASAQ 211 >gi|209547941|ref|YP_002279858.1| flagellar motor protein MotB [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533697|gb|ACI53632.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 447 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 6/277 (2%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 Y +PF + T + ++ D+K ++ + Sbjct: 177 AYRDPFDPDFWTKQVEVTTAGKSAPPGKSDEQAAESATTEIAKVEDMKPIPLTTDQKAAQ 236 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ + + K+ + +K K + + ++++ ++++ Sbjct: 237 EAKGAAEATDGKAPDDKKSGDKKAEDKKAPAQKDAAQKDADHQKDADKSAAETEQQQQKE 296 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + + Q + G +A + +G+ + G+L+SI DQ + MFD S++P Sbjct: 297 AEQLQAQIAQRI------GGIAGKLAEGLTVTASEGGLLVSISDQSDDSMFDIGSAVPRQ 350 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 E ++ ++KIG +L ++IRGHTD ++ +NWRLS+DRA SAY +L++ G+ E Sbjct: 351 EMVLAMEKIGAILKERGGAVAIRGHTDGRQYKGAQNENWRLSMDRAQSAYYMLVRGGLDE 410 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 RIS++SGFA RLK+ SDP N+ NRRI+ILV+ +G Sbjct: 411 KRISQVSGFADRRLKLPSDPFNATNRRIEILVQADRG 447 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 8/192 (4%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + + ++ II+K+ D ++ G+WKI YADFMT +MAFFLVMW++NA +++ Sbjct: 1 MSEGENHHHGKNEIIIVKRHGGGDHDGSHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT-----KNSVDLKI 115 TK ++ YFNP + ++ + + + E D + Sbjct: 61 TKASVATYFNPIKLSDEKPTEKGLKKPVDNAEGEEKQEKSKQKEENPNDGKASADGDDQT 120 Query: 116 GSTNQK---KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 ++ + + EN L+ Q + +++ + G + Sbjct: 121 STSGDQTNYSEADFFENPYSVLAEIAQEVGQQANVSAKGDGGAQDSGPATGADGGEAYRD 180 Query: 173 YFLPPLSKEKIL 184 F P +++ Sbjct: 181 PFDPDFWTKQVE 192 >gi|261313945|ref|ZP_05953142.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10] gi|261302971|gb|EEY06468.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10] Length = 283 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 4/236 (1%) Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 +L + + Q + + ++ ++ + S DL + Sbjct: 48 AELAHETGVLQNQSAKGDGGTAQSGSASGADGGEAYRDPFSPDYWSSKAVGDLTPPAPQT 107 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK----GVLFETTRTGILI 226 P + A +++ + DL K + + V G++I Sbjct: 108 VPQTAPLPQAQPKKAETQEELIADLKKAATGEPAPNAGKAAKPEPMPDVTVVPVEGGVMI 167 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 + D+ + MF S+ P + +L++I +V+A + I GHTDA PF++ DN R Sbjct: 168 QLTDKVDYGMFTIGSAKPDARVVQMLERIAQVIARQPGEVIISGHTDARPFKSATYDNRR 227 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 LS RA AY +L++ G+ E R+ ++ G+A K +DP + NRRIDI ++ + Sbjct: 228 LSSARAQMAYYMLVRGGLDEKRVLRVEGYADRHPKNPNDPNAAENRRIDIFIKSKP 283 >gi|56695114|ref|YP_165461.1| chemotaxis protein MotB [Ruegeria pomeroyi DSS-3] gi|56676851|gb|AAV93517.1| chemotaxis protein MotB [Ruegeria pomeroyi DSS-3] Length = 285 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 61/310 (19%), Positives = 116/310 (37%), Gaps = 58/310 (18%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 +WK+ YADF+T +MAFF++MW++NAT + +K + YF+ P Sbjct: 34 AWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADYFSD---------------SIPIN 78 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 S + + + + G+ ++ + + +Q Sbjct: 79 PVSGGGDGSFGGDSMFSENAMVTTGTGGVNRRRADADRSRGSTGVDRQGGEG-------- 130 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 PL + K L + R + LV++ + Sbjct: 131 ------------------------EPLEEFKTLEAALQGRGGE----------SLVSEQL 156 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 K ++ T G+++ +I +P+F+ +S P + + + + I++ GH Sbjct: 157 RKHIVTRVTDEGLIVELISTDESPLFETNSDRPTQLMKELAKVVVRAADMVSNGIAVGGH 216 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331 A P W LS RA + G+ E+RI +++G A +L + PM + N Sbjct: 217 IRAHPVVLARNPVWELSTARAERTRVLFEGLGMKEERIQRVTGHADRKLTDPN-PMAARN 275 Query: 332 RRIDILVEDR 341 RI+I+ Sbjct: 276 DRIEIIFLRS 285 >gi|315127296|ref|YP_004069299.1| chemotaxis protein [Pseudoalteromonas sp. SM9913] gi|315015810|gb|ADT69148.1| putative chemotaxis protein [Pseudoalteromonas sp. SM9913] Length = 320 Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 116/327 (35%), Gaps = 66/327 (20%) Query: 16 IIKKKVAIDD-TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 ++++++ + W + YAD+MT++ AFF+V++ I +D K + Sbjct: 1 MLRRRLRHHQLKSQHTERWLVSYADYMTIMFAFFVVLYAIAINKEDNIKVLSDSLEHVFD 60 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 ++ + D + E +T + L S + +Q L + Sbjct: 61 KSAKQYS---------QQGNGVNGDALLLERVTPEAEILYGESIQELEQGPMLLDGQSDN 111 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 SN Q K L Sbjct: 112 SNISQRHLGKP----------------------------------------------LDS 125 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L K+ S+L + E ++ ++I + + +F S++ + +++K Sbjct: 126 LLAKLQSSLIDEIRSGEA---SLELSQDWLVIELN---SGLLFASGSAVAHNKAKEIVKK 179 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 I ++A I +RG+TD RN R NW LS+ RA S L + G+ R+ I Sbjct: 180 IEAIIASVDNYIRVRGYTDNETIRNEIFRSNWELSVARATSILVELERLGIESARM-AIE 238 Query: 314 GFAHHRLKIASDPM--NSANRRIDILV 338 G+ + ++ + NR++ I + Sbjct: 239 GYGQYSPFADNNTEAGRAENRKVVIAL 265 >gi|149375537|ref|ZP_01893307.1| flagellar motor protein MotB [Marinobacter algicola DG893] gi|149360242|gb|EDM48696.1| flagellar motor protein MotB [Marinobacter algicola DG893] Length = 305 Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 98/321 (30%), Gaps = 65/321 (20%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 ++ + +W + +AD M++LM FF+++ + D K I Sbjct: 5 PEEEKAGIPAWVVTFADLMSLLMCFFVLLLSFSEIDAQKFKQIAGEL-----------SK 53 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 F Q I + + + + + ++ Sbjct: 54 AFGVQREVPVLEVPMGTSPIFDKFSPAPPEPTVVNEVKQTTTD----------------- 96 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 K +L K + Sbjct: 97 -----------------------------EQPELETLKSPTDVAVESAIQDELQKTLEQV 127 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 S L V I++ + ++ F S+ E +L ++ ++L Sbjct: 128 RSVLETAIEDGRVNLTQDHHRIIVRVEEK---GAFPSGSADLTWEFEGLLLEMADILVEI 184 Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRL 320 ++I GHTD P R NW LS RA + L+ G + R+ ++G A+ Sbjct: 185 PGKLTIEGHTDDVPIRTQRFYSNWDLSAARAAAVANALLAEGKLKPSRL-AVTGLAYTEP 243 Query: 321 KIASDP--MNSANRRIDILVE 339 ++ + + NRR++I+++ Sbjct: 244 RVPNTSSENRAKNRRVEIIID 264 >gi|220934494|ref|YP_002513393.1| chemotaxis MotB protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995804|gb|ACL72406.1| chemotaxis MotB protein [Thioalkalivibrio sp. HL-EbGR7] Length = 290 Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 1/223 (0%) Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 Q+ + F+ + S + + E+ L + Sbjct: 50 TDDEQKAAISEFFQNPSAFMGASPTPAFEAGTGTSPSLIDFEGAIDMAPEQMAELDAETI 109 Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 E++ + K+RL+ L + + + + +L + T G+ I I+D+ N PMFD Sbjct: 110 EELAEQQEKERLEALMQALEEAIERSQALEPFKDQLLLDITPEGLRIQIVDKENRPMFDL 169 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ + +LQ++G ++ ISI GHTDA PF NW LS DRA +A + L Sbjct: 170 GSAQLRGYSTAILQELGGLINQVPNKISITGHTDARPFLRPNYSNWELSSDRANAARRAL 229 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + G+ E +I ++ G A L ++P N NRRI I+V R+ Sbjct: 230 VSGGMDEAKIGRVVGLASTVLFDKANPENPINRRISIIVMTRE 272 >gi|152965627|ref|YP_001361411.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216] gi|151360144|gb|ABS03147.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216] Length = 342 Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 55/310 (17%), Positives = 109/310 (35%), Gaps = 61/310 (19%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W + YAD +TVLMA F+V++ ++ D + + Sbjct: 23 WLVAYADMLTVLMALFIVLFALSQIDQLKFAQFKDGLT---------------KGTSSSN 67 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 + + ++ +D+ ST Q Q L Sbjct: 68 QAVSGSAGILEATNGDMPIDITPNSTGQPLQQSVSTEVRKIL------------------ 109 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + ++ A + + +++AK+I + L+ Sbjct: 110 ------------------QAAQTAQTQEDLKAAQEEVQDYREIAKQIDAALTA---KGDQ 148 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 V + T G+++ ++ F +S+ + VL I +LA I+++GHT Sbjct: 149 DQVTYRITSDGLVVGLVAD--NVFFANASAEVEEKGREVLDVIAPILAQLPNDIAVQGHT 206 Query: 273 DASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 ++ RDNW LS RA + Q +G+ + + +G+A R ++ + Sbjct: 207 NSLSLSATTRYRDNWDLSAARAMTVVQRFTAAGIPGNHL-SGTGYADSRPLYPNEDPKAL 265 Query: 331 --NRRIDILV 338 NRR+D++V Sbjct: 266 TGNRRVDLVV 275 >gi|332294873|ref|YP_004436796.1| OmpA/MotB domain protein [Thermodesulfobium narugense DSM 14796] gi|332177976|gb|AEE13665.1| OmpA/MotB domain protein [Thermodesulfobium narugense DSM 14796] Length = 243 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 7/202 (3%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + ++ + + L ++ +++ + P S + + L+ + Sbjct: 46 ATINASKFAATAQALREAFGGYTILDRGSSVIGEPGSTTQSAPVVPDSALKAQEASLKIA 105 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + N + + +T R ++ + D+ +FD + P+ +L KI VL Sbjct: 106 EILRQSLNPNQFSVIQTERGYLISILTDK---ILFDSGKANLKPDAFPLLTKIAAVLKKI 162 Query: 263 TEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 + + GHTD P + NW LS RA S + ++ G+S R+ I+G+A R Sbjct: 163 DNEVYVEGHTDNVPIHTVEFPSNWELSAARAASVAKYFIEQGISPSRLV-IAGYADTRPV 221 Query: 322 IASDP--MNSANRRIDILVEDR 341 ++D NRRIDIL+ + Sbjct: 222 ASNDTPQGRQKNRRIDILITKK 243 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 30/89 (33%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 W + Y+D +T+LMAFF++++ + + A Q +G Sbjct: 16 HDSAGGMRWLLTYSDMITLLMAFFILLFSMATINASKFAATAQALREAFGGYTILDRGSS 75 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDL 113 P + + + S+ + Sbjct: 76 VIGEPGSTTQSAPVVPDSALKAQEASLKI 104 >gi|238762341|ref|ZP_04623312.1| Lateral flagellar proton motor protein B [Yersinia kristensenii ATCC 33638] gi|238699326|gb|EEP92072.1| Lateral flagellar proton motor protein B [Yersinia kristensenii ATCC 33638] Length = 302 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 69/342 (20%), Positives = 126/342 (36%), Gaps = 67/342 (19%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M SH Q IIK+ + + G+WK+ +ADF +MA F+V+WI+ ++ Sbjct: 1 MRSHARGG----QTTIIKRSARKRHSGGHSGAWKVAFADFTLAMMALFMVLWIVGVVSEE 56 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 ++ I N + I + N ID TK+++ +++ Sbjct: 57 ERQEIVAQLNGQTIFSQQSFISIPSKSKSGGGKFSNSIDGKEQAKETKSNLAVEV----- 111 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + S E + + + T + + + +P + Sbjct: 112 ------------PDPEQSLEDVVDKSRKEMEELSRIIMQITSAYDAQSNLQMEVVPQGLR 159 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I K++ Q + + TP F + Sbjct: 160 ILIQDDKQRDMFQRSSAVL----------------------------------TPFFGRL 185 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVL 299 + P + I I GHTDAS +R+ +NW LS +RA A++ L Sbjct: 186 LAELAPAFNEM-----------DNKIIITGHTDASRYRDQVMYNNWNLSGERALMAHKAL 234 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +K G++E R+ +I+ A L ++P+ + NRRI+I+V + Sbjct: 235 VKGGLTEGRVLQINAMADQMLLDPAEPLAAKNRRIEIMVLTK 276 >gi|315122280|ref|YP_004062769.1| flagellar motor protein MotB [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495682|gb|ADR52281.1| flagellar motor protein MotB [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 158 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 117/158 (74%), Positives = 137/158 (86%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 MKRKKR+QDL +KIS+TLSGLVA++IVKG+LF+TT G+LISIID NTPMFDKSSSIPL Sbjct: 1 MKRKKRMQDLEQKISTTLSGLVANHIVKGILFKTTPNGMLISIIDHNNTPMFDKSSSIPL 60 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 PE I++LQKIGE L+ S E ISI GHTDASPFR+ DNW+LSLDRAYS YQ+LMKSG+S Sbjct: 61 PEMILILQKIGEALSQSNENISIEGHTDASPFRHSTGDNWKLSLDRAYSTYQILMKSGIS 120 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 E RISKISG A H KI+SDPMN+ANRRI+ILV+D +G Sbjct: 121 EKRISKISGLAQHNPKISSDPMNAANRRIEILVQDGEG 158 >gi|88858085|ref|ZP_01132727.1| putative chemotaxis protein [Pseudoalteromonas tunicata D2] gi|88819702|gb|EAR29515.1| putative chemotaxis protein [Pseudoalteromonas tunicata D2] Length = 321 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 102/326 (31%), Gaps = 69/326 (21%) Query: 19 KKVAI---DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 ++ N++ W + YAD+MT++ A F+V++ + T ++ + Sbjct: 2 RRYRQLTISSENNHVERWLVSYADYMTLMFALFVVLYSLAITKEEEFSVLSDSLESIFVQ 61 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 E T++ +K K + N Sbjct: 62 ---------------------------PEIRTEDGSGVKGEGLLLKNSVESEFNLYGNAI 94 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 ++ D K K L L++E A+ + Sbjct: 95 TDEERGPELVDGFGDLVNLK------------KKRLGSPLESLNQELKTALFDHIEAGEA 142 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 ++ + I + + +F S++ V++ I Sbjct: 143 KVELDQD--------------------WLTIEL---SSGLLFGSGSAVATLNAKKVVKDI 179 Query: 256 GEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 E++ I IRG TD P N NW+LS+ RA L + G++ ++ I G Sbjct: 180 YEIVKSVDNYIRIRGFTDDRPINNELFSSNWQLSVARATEMLLQLERLGINPAQM-AIEG 238 Query: 315 FAHHRLKIASDPMNSA--NRRIDILV 338 + H +++ NR++ I + Sbjct: 239 YGEHSPTSSNETEEGRAANRKVVIAL 264 >gi|295696765|ref|YP_003590003.1| OmpA/MotB domain protein [Bacillus tusciae DSM 2912] gi|295412367|gb|ADG06859.1| OmpA/MotB domain protein [Bacillus tusciae DSM 2912] Length = 266 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 81/215 (37%), Gaps = 10/215 (4%) Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + +++ S + + KG + S P + + Sbjct: 42 DMYKFVNLSASLSQALYNQNQVQLKGLGTTGLIAAQPSAGPPGRVPPAPDFLKTPEQVAE 101 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +++L + ++ S + + V+ E G+LIS+ D +FD + PE Sbjct: 102 ERQLAQIKLQLQSFIQK---QGVAGQVVVEDKPKGLLISLRD---VILFDTGKADLKPEA 155 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSED 307 +L + LA + I GHTD P NW LS RA + + L G+ Sbjct: 156 RKLLDGLLPFLAQVGNPLEIEGHTDNRPIHTAQFPSNWELSTARALTVLEYLQAKGIDPK 215 Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 R+S +G+ R ++D NRR++I +E Sbjct: 216 RLSA-TGYGEWRPVASNDNPEGQALNRRVNITIER 249 >gi|289523562|ref|ZP_06440416.1| flagellar motor protein MotB [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503254|gb|EFD24418.1| flagellar motor protein MotB [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 239 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 7/152 (4%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + + K + L ++N++ V GI+ISIID +F S +P + Sbjct: 88 AEQVKKVHEMMVQLLESENLMNEVTVRIEERGIVISIID---GLLFQSGSVELIPPARRL 144 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + KI +++ IS+ GHTD P R RDNW LS RA L+++G+ R+ Sbjct: 145 IYKIAQIINDLPNQISVEGHTDNVPLNRGPYRDNWGLSAMRAAVVGSYLVEAGIDPKRLR 204 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVED 340 + G+ R + +D NRR+DI++ + Sbjct: 205 TV-GYGQSRPLVPNDTEEHRRINRRVDIVILN 235 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 5/95 (5%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + D P G+W Y D +T+L+ FF+ ++ + D + + F L Sbjct: 3 RKRKKDLPQLRGNWLTTYGDMVTLLLTFFVFLYSFSTIDVQKFQKMIYSFQDAIGVLPGG 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 I P E + Q + +T N+ +K Sbjct: 63 VTTI-----PGEETMQGAQLTGPGQEMTLNAEQVK 92 >gi|260466608|ref|ZP_05812796.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075] gi|259029614|gb|EEW30902.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075] Length = 466 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 71/267 (26%), Positives = 127/267 (47%), Gaps = 2/267 (0%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P + + D P +++++ ++ D + + + + Sbjct: 197 PGAEASAQRPRIEGDPVKPGDKAAETQVAKVKAVPPAPPLKDAPLEPLAKDAAATMAKAS 256 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 +++ S+ ++ + K+ S + P + EK K Sbjct: 257 DIKAGDTKASDTKASNAKAGEGNAAEAAKADATLASREAAKPEAAKPEAAEKAPTAAALK 316 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 D+ ++++ D + GV E T G++ISI D+ + MF+ S++P E ++ Sbjct: 317 AAADVKRQLADAFKPG--DKLHDGVSVEATDKGVVISITDRLDFGMFEVGSALPSRELVL 374 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 ++KIG ++ ISI GHTDA PFR+ + DNWRLS RA+SAY +L++ GV E RI+ Sbjct: 375 AMEKIGRIVNSQKGTISINGHTDARPFRSDSYDNWRLSTARAHSAYYMLVRGGVDERRIT 434 Query: 311 KISGFAHHRLKIASDPMNSANRRIDIL 337 +++GFA + K +DPM + NRRI+IL Sbjct: 435 EVAGFADRQPKDPADPMAAVNRRIEIL 461 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 80/201 (39%), Gaps = 12/201 (5%) Query: 5 GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 + + + II++ D ++ G WKI +ADFMT +M FFLVMW+INA ++ TK A Sbjct: 4 AEADHGRHEIIIVRHAHGDHDEGHHGGVWKIAFADFMTAMMCFFLVMWLINAANEQTKAA 63 Query: 65 IEQYFNPFGKNLMTASKGIFD------------EQNPPERSSQNKIDLSIDEHITKNSVD 112 + YFNP +S+ + ++P + + ++ D + ++ D Sbjct: 64 VASYFNPVKLVDRNSSRKGLEDLGDGPNAIGATAESPQQATGKSGQDGTGGAGTSERKQD 123 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + +++ + LS ++++ + G + Sbjct: 124 KQEQQQSERSDEHLFADPYAVLSEIATDTGVMQNVSQKGDGGAQSAGPATGASGGASYRD 183 Query: 173 YFLPPLSKEKILAMKRKKRLQ 193 F P +++ A + Q Sbjct: 184 PFEPDFWSQQVAAPGAEASAQ 204 >gi|89067516|ref|ZP_01155029.1| putative chemotaxis MotB protein [Oceanicola granulosus HTCC2516] gi|89047085|gb|EAR53139.1| putative chemotaxis MotB protein [Oceanicola granulosus HTCC2516] Length = 270 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 116/331 (35%), Gaps = 67/331 (20%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 ++ IIIK+K ++ G+WK+ YADF+T +MA + N Sbjct: 5 SNAPIIIKRKKITGGDGHHGGAWKVAYADFVTAMMA---------------FFMLMWLLN 49 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + F P R S ++I ++ + G+ Sbjct: 50 ATTEQQRKGIADYFSPTIPINRISGGGDGAFGGDNIFTDNTLAQSGTNPGATG------- 102 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 +P + E+ + + Sbjct: 103 ------------------------------------------DAVPGATAEEAAQVAALE 120 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 ++++ + + ++AD ++ ++ + T G++I I D P+F ++ P P T+ Sbjct: 121 QIEE--QLLGRGGESMIADEALQHIVTKLTDEGLVIEIFDLDGAPLFAPGTAEPEPVTVE 178 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + VLA +++ GH A P W LS RA ++L SG + +RI Sbjct: 179 LAAVFARVLALVDNDVALAGHVRARPVVVADSRVWPLSTSRATRFRELLEASGQAPERIV 238 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +++G A + + N R++++V Sbjct: 239 RVTGHADRAPAVRNAVSL-RNNRLEVVVLRS 268 >gi|115524590|ref|YP_781501.1| OmpA/MotB [Rhodopseudomonas palustris BisA53] gi|115518537|gb|ABJ06521.1| OmpA/MotB [Rhodopseudomonas palustris BisA53] Length = 280 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 107/314 (34%), Gaps = 60/314 (19%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 W + +AD M +L++FF+++ + D + + Sbjct: 17 GHGWFVTFADLMALLVSFFVMLVSFSHQDQVKLQIVAGSMRDAFGVQK------------ 64 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + ++ ++K +Q + ++ + Sbjct: 65 -----DARYSAIVETDGVPVRGNVKNVDRVAAEQSTPFPSPDEGGGMAKTGAQIQ----- 114 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 S A++ + +++K Sbjct: 115 ---------------------AEREFALASASLRQALQDMPEIAEVSKN----------- 142 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 V+FE T+ G+ + I+DQ PMF + S +P T ++++++ L ++ I++ Sbjct: 143 -----VMFEETKEGLNLQIVDQDGRPMFPEGSPVPFQRTKLLIERLAAPLRATSLRITLV 197 Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 GHT ++ D + LS RA + Q+L + G+ + ++G A DPM Sbjct: 198 GHTSSAVLPGRSDADGFDLSWQRANAVRQILKREGLPIANVLSVTGKADSEPLFPDDPML 257 Query: 329 SANRRIDILVEDRQ 342 +ANRR+ I + Sbjct: 258 AANRRVTITLLREN 271 >gi|90418368|ref|ZP_01226280.1| putative chemotaxis protein motB [Aurantimonas manganoxydans SI85-9A1] gi|90338040|gb|EAS51691.1| putative chemotaxis protein motB [Aurantimonas manganoxydans SI85-9A1] Length = 413 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 1/253 (0%) Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 P D + + + + + S + Sbjct: 160 PGLNGGDAYRDPFDPASWQLAPNATESAAVIDEAPPSEFKTAVLPNDMSDEPVPVDAETQ 219 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 ++ + + + E A+ + R +L +I++ + Sbjct: 220 AEAVAEANAEAEAETPDAGEAELAEADADAKPADGEAVAQADRADELKAEIAAEFARQ-G 278 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268 + + G+ ISI D + MF+ S+ P P+ + ++++I VL+ +SI Sbjct: 279 EPLPTNFEVVPGEGGVTISIADDMMSGMFEVGSARPTPQVVAMMERIASVLSKQPGNVSI 338 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 RGHTD+ PFR+ DNWRLS RA+ AY +L + G+ EDR+ I G A KIA DP Sbjct: 339 RGHTDSRPFRSAQYDNWRLSTARAHMAYYMLARGGLDEDRVKAIEGVADRAPKIADDPEA 398 Query: 329 SANRRIDILVEDR 341 +ANRRI+IL+ + Sbjct: 399 AANRRIEILLTEP 411 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 71/193 (36%), Gaps = 1/193 (0%) Query: 1 MNSHGDKNQ-ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDD 59 M + + II++++ + ++ G WKI +ADFMT +MAFFLVMW+ A+D Sbjct: 1 MTDQSGAGHLDRQEIIIVRRRGGHGEEAHHGGVWKIAFADFMTAMMAFFLVMWLTQASDM 60 Query: 60 DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119 T+K + QYFNP N + + ++ + +N+ +S + G Sbjct: 61 ATRKQVAQYFNPIRLNDASPATRGVEQSDDGASRDENENGISKADTNGDPHGKPLAGDQE 120 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 ++ + L+ + + + + + + L+ Sbjct: 121 GGEEEALFRDPYAVLAEIAAEGASETTGELQGKPDGTGLPGLNGGDAYRDPFDPASWQLA 180 Query: 180 KEKILAMKRKKRL 192 + Sbjct: 181 PNATESAAVIDEA 193 >gi|255021344|ref|ZP_05293392.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus ATCC 51756] gi|254969207|gb|EET26721.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus ATCC 51756] Length = 279 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 97/326 (29%), Gaps = 71/326 (21%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + ++ N W + YADF+T +++ + Sbjct: 3 RRKQEEEWENHERWLVSYADFIT-------LLFAF------------------FVVMYAI 37 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S + + + + ++ + + + ++ Sbjct: 38 SSVNEGKYRVLSETLVSAFT-----GHPMSITPVQNPAESAGPTSVLKLPPLPAVAKIAA 92 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + K A K LQ L K++ Sbjct: 93 TPSVAKGVVSP-------------------------------KAQAPKSNTDLQQLQKQM 121 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L L+ D V ++ G++I D +F + PE L I ++L Sbjct: 122 EKLLQPLIRDG---SVAIHSSALGVVI---DLNAKILFPSGQATLTPEAQQNLAAIAKIL 175 Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I + G T+ P R NW LS RA + ++ + GV+ + + G+ + Sbjct: 176 KTVPYQIQVNGFTNDLPIRTAQFPSNWYLSAARAVAVTELFIAEGVNPEHLVAA-GYGQY 234 Query: 319 RLKIASDPMN--SANRRIDILVEDRQ 342 ++ + NRR+ I+V Q Sbjct: 235 HPIEPNNTAAGLAMNRRVSIVVVAPQ 260 >gi|150016469|ref|YP_001308723.1| OmpA/MotB domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149902934|gb|ABR33767.1| OmpA/MotB domain protein [Clostridium beijerinckii NCIMB 8052] Length = 251 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 11/184 (5%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + S N ++ ++ +++L D+ KK+ ++ + V Sbjct: 66 VSDSSNSPPTVIDQQNTQNNSDSIAEEEKLSDVKKKVDDLVNDS---ELKGSVTTSIQER 122 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR 282 G++IS D F+ S P+ L I ++L I + GHTD N Sbjct: 123 GLIISFNDS---VFFNSGQSTIKPDWQGKLISISKILNDIDNYIHVEGHTDNVAINNDYF 179 Query: 283 -DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 NW+LS RA + + L+ G V +R+S + G+ +R ++ +ANRR+DI++ Sbjct: 180 HSNWQLSAVRAANVVEFLISKGNVKPERLSSV-GYGEYRPVKDNNTEDGRAANRRVDIVI 238 Query: 339 EDRQ 342 + + Sbjct: 239 LNTK 242 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 33/87 (37%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K ++ W + Y DF+T++M FFL+M+ I+ D + + + Sbjct: 2 KKNTKKEKDDTERWMLSYLDFITLMMIFFLMMYAISNVDTKKSQTLANSLKIGFNSGNGE 61 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHI 106 + + + + ++ + + Sbjct: 62 NVIAVSDSSNSPPTVIDQQNTQNNSDS 88 >gi|322421034|ref|YP_004200257.1| OmpA/MotB domain-containing protein [Geobacter sp. M18] gi|320127421|gb|ADW14981.1| OmpA/MotB domain protein [Geobacter sp. M18] Length = 292 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 92/222 (41%), Gaps = 11/222 (4%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 N + + S ++ + G+ K DL + + E + L Sbjct: 75 RNALATDKKGLEDALKSTSDAKNQKIGELSQKLGDLGQKLADLEADNKRLRDEVARLQKL 134 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +++ +Q +K S L + + V + + ++++D +FD + PE Sbjct: 135 KEEEVQKTSKTYSDLLEQMKGEMAKGQVTISELKGKLTVNMVDS---VLFDSGKAEVKPE 191 Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN----IARDNWRLSLDRAYSAYQVLMKS 302 +VVLQK+ ++L + + + I GHTD NW LS RA + + L + Sbjct: 192 GLVVLQKVIDILKNIKDKVVRIEGHTDNVQIVGQLAKRYPTNWELSAARAINVTRYLQQQ 251 Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G+ ++ ++ + H+ +D + NRRI+I++ ++ Sbjct: 252 GLDPALLAAVA-YGEHKPVAPNDTDEGRAKNRRIEIVLVAKE 292 >gi|260061425|ref|YP_003194505.1| Thrombospondin type 3 repeat:OmpA/MotB [Robiginitalea biformata HTCC2501] gi|88785557|gb|EAR16726.1| Thrombospondin type 3 repeat:OmpA/MotB [Robiginitalea biformata HTCC2501] Length = 446 Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 80/285 (28%), Gaps = 16/285 (5%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 + F +G G+ + D + Sbjct: 161 QYKHAFEDYGVKHFQHLAGVSIRFGGTDTDGDGIYDKDDACPEVAGLEAFNGCPDSDGDG 220 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + ++ + S + C ++ D C + +++ + ++ + Sbjct: 221 IEDAKDACPNEAGSMEMNGCPDADGDGVADKDDACPNEAGLPALSGCPDADGDGVADKDD 280 Query: 184 LAMKRKKRLQ---------DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + D + V + + + T Sbjct: 281 ECPSEAGPAENNGCPWPDTDGDGVLDKDDECPDTAGTVANNGCPEVTEEVQAQLNEYART 340 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 +FD + PE+ V I +L ++ GHTD+ N +LS +RA Sbjct: 341 ILFDTGKASLKPESTRVFVDIIRILDQYPNSRFTVEGHTDSV---GSNSLNQKLSEERAN 397 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 S L+ G+ R+ + G+ R ++ NRR++I Sbjct: 398 SVRDFLINEGIDASRLEAV-GYGEERPIATNNTRAGRTQNRRVEI 441 >gi|229827389|ref|ZP_04453458.1| hypothetical protein GCWU000182_02777 [Abiotrophia defectiva ATCC 49176] gi|229788327|gb|EEP24441.1| hypothetical protein GCWU000182_02777 [Abiotrophia defectiva ATCC 49176] Length = 305 Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 111/329 (33%), Gaps = 35/329 (10%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K ++ P +W ++D M +L+ FF++++ +++TD I + Sbjct: 3 RKKKTEEAPAGAPAWMATFSDLMNLLLCFFVLLFSMSSTDRAKYNEIVEAVTSSFSIFSG 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + + L +Q + +N+ + ++ Sbjct: 63 GGSAL-------------------------DQGILISSGVSQLNELAEYYSNLAVDNAAK 97 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + + D+ K ++ ++ + K E + K K + K Sbjct: 98 EDGTKGGNGKSDNGKIENNNENKPDNNNNGKAEEDKEVTKDEVVKKYQKELKETAE--KN 155 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + V + + I + +FD S+ VL K + Sbjct: 156 YEKASEAINQFKLNDMVQLKMDTSYNYIGLSID-GYFLFDSGSAELKKGADKVLDKAAGI 214 Query: 259 LAHSTE-VISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314 L + I I GHTD P N ++N LS RA + + L + + ++S SG Sbjct: 215 LMKFKDADIVIEGHTDNVPQTNTVKYKNNLWLSGARAMTVLEYLTEVEHMDPKKLSA-SG 273 Query: 315 FAHHRLKIASDPMNSA--NRRIDILVEDR 341 + ++ NRR++I + ++ Sbjct: 274 KGEYEPIASNKTAEGRQKNRRVEIKIFNK 302 >gi|296134255|ref|YP_003641502.1| OmpA/MotB domain protein [Thermincola sp. JR] gi|296032833|gb|ADG83601.1| OmpA/MotB domain protein [Thermincola potens JR] Length = 296 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 8/172 (4%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 PL + A +KK ++++ K + + N+ V+ G++IS+ + Sbjct: 68 EAPGPLVIPEQSAGAQKKEMEEMKKAKEQLDAYIKGQNLGGKVVVAYEERGLVISLKETM 127 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDR 291 F S+ P+ L KIG+VL + + I GHT P R NW LS R Sbjct: 128 ---FFAIGSAAINPQAQETLIKIGQVLKNMPNNLRIEGHTCNLPIRTANFPSNWELSTAR 184 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 A + + L+ G R+S +G+ +R + + + NRR+DI+V Sbjct: 185 ATNVVKFLIDRVGFDPKRLSA-TGYGEYRPLVPNTSEANRAMNRRVDIVVLR 235 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 30/97 (30%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ + N W I YAD +T+LM FF++M+ I+ + + + + Sbjct: 3 KRAKEPEKAPNHERWLITYADLITLLMIFFIIMYTISNVNAKKFAQLSSSLSSALVGQNS 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 E + K L Sbjct: 63 GYFIGEAPGPLVIPEQSAGAQKKEMEEMKKAKEQLDA 99 >gi|284007193|emb|CBA72482.1| flagellar motor protein MotB [Arsenophonus nasoniae] Length = 320 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 4/166 (2%) Query: 180 KEKILAMKRKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + L + R + L + + + + ++ +L + G+ I IID N PMF Sbjct: 101 EPNQLPETEQDRFKKLQQDLELLIMNDPRLQDLKPNLLIDLMDEGLQIQIIDGENRPMFA 160 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAY 296 S++ +L + VL IS+ GHTD++ + NW LS DRA S+ Sbjct: 161 SGSAVIDKNMQKILHVLAPVLNDYPNKISLAGHTDSTAYAKGGYGYSNWELSADRANSSR 220 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + L+ G+ E +I ++ G A ++P +ANRRI ILV +++ Sbjct: 221 RTLISGGLDEHKIMRVVGMASTVPL-ENNPAAAANRRISILVLNKE 265 >gi|206890444|ref|YP_002248653.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742382|gb|ACI21439.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM 11347] Length = 252 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 8/190 (4%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 L + + + + + + K+ + K I L + ++ Sbjct: 68 LESGQSFMQQSSAIQQEVKTSVQESTPSETRAKRFEEQFKKTIEEKLKE-----LKDHIM 122 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 +T G+ I I+D PMF SS+ P + +L+ + E + +++ GHTDA P Sbjct: 123 IDTVEGGVRIQIVDLEGEPMFPLSSAEPTEKAREILKVVAENIKDEPARVAVEGHTDAVP 182 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 FR NW LS RA SA + + + GV+ ++I+++ G+A I DP + NRRI I Sbjct: 183 FRGGKTTNWELSTARASSARREIERYGVAPEKIARVVGYADTLPLIKDDPKDPRNRRISI 242 Query: 337 LVE---DRQG 343 ++ ++QG Sbjct: 243 ILMFEKEKQG 252 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 66/175 (37%), Gaps = 2/175 (1%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + + II KK+ ++ GSWK+ YADF T +MAFFL++W+++ D + AI YF Sbjct: 3 DKSKTTIIVKKIKKGHEAHHGGSWKVAYADFTTAMMAFFLLLWLLSMLDPVKRAAIADYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 NL+ + + + + ++ + + S + + T ++K + ++ Sbjct: 63 R--YFNLLESGQSFMQQSSAIQQEVKTSVQESTPSETRAKRFEEQFKKTIEEKLKELKDH 120 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + + + + + ++ + Sbjct: 121 IMIDTVEGGVRIQIVDLEGEPMFPLSSAEPTEKAREILKVVAENIKDEPARVAVE 175 >gi|148265913|ref|YP_001232619.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4] gi|146399413|gb|ABQ28046.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4] Length = 287 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 82/189 (43%), Gaps = 11/189 (5%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 ++L + I EN L +++ +Q +K L + ++ V Sbjct: 103 SELRQKIADLENENAKLKEDIASLKKAKEEEVQKTSKTYEDLLEKMKSEISQGQVTISEL 162 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRN 279 + + ++++D +FD + P+ +VVLQK+ ++L + + I I GHTD Sbjct: 163 KGKLTVNMVDA---VLFDSGKAEVKPDGLVVLQKVIDILKNIKDKSIRIEGHTDNVSIVG 219 Query: 280 I----ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 NW LS RA + + L + G+ ++ I+ + + +D + NRR Sbjct: 220 ALAKKYPTNWELSAARAINVTRYLQQQGIDPTNLAAIA-YGEFKPVAGNDTPEGKAKNRR 278 Query: 334 IDILVEDRQ 342 I+I++ ++ Sbjct: 279 IEIILVPKE 287 >gi|213647163|ref|ZP_03377216.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 275 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 63/304 (20%), Positives = 105/304 (34%), Gaps = 71/304 (23%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 MT +MAFFLVMW+I+ + I +YF +T I + ++P + Sbjct: 1 MTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGNRIANSKSPIPGGGDDYTQQ 60 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + N +LK Sbjct: 61 QGEVEKQPNIDELK---------------------------------------------- 74 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + E L L + ++ +L+ L + L V + + ++ Sbjct: 75 -------KRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDL---VQEGLRIQIIDSQN 124 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280 R MF S+ P +L+ I VL IS+ GHTD P+ N Sbjct: 125 RP-------------MFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANG 171 Query: 281 A--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 NW LS DRA ++ + L+ G+ ++ ++ G A P ++ NRRI +LV Sbjct: 172 EKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDDAINRRISLLV 231 Query: 339 EDRQ 342 ++Q Sbjct: 232 LNKQ 235 >gi|153956379|ref|YP_001397144.1| hypothetical protein CKL_3788 [Clostridium kluyveri DSM 555] gi|219856692|ref|YP_002473814.1| hypothetical protein CKR_3349 [Clostridium kluyveri NBRC 12016] gi|146349237|gb|EDK35773.1| MotB [Clostridium kluyveri DSM 555] gi|219570416|dbj|BAH08400.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 254 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 11/206 (5%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 K +S K + + + P ++ ++K+L +L ++ Sbjct: 40 SASKYKQVAESLKMSMGGGKSVIGSDDTSSIKETVDPEETQQTDTDDQEKKLSELKSEVD 99 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + V G+++S+ D +FD + PE L +IG++L Sbjct: 100 KYLQNS---EMSGSVSTSINERGLIVSMNDSL---LFDTGKADIKPEFQQKLVEIGKILN 153 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 + I GHTD P N NW+LS DRA + + L+K +G+ +++S I G+ + Sbjct: 154 QLGNYMRIEGHTDNIPISNNQYSSNWKLSCDRASNVTEFLIKSAGIEPEKLSAI-GYGEY 212 Query: 319 RLKIASDPMN--SANRRIDILVEDRQ 342 R + + NRR+DI++ + + Sbjct: 213 RPVGDNSTDEGKAKNRRVDIVILNSK 238 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 2/108 (1%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K N W + Y+D +T+LM FF+VM+ ++ K + + Sbjct: 2 KKKKKHAEENTERWLLTYSDLITLLMIFFVVMYSMSNISASKYKQVAESLK--MSMGGGK 59 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 S D+ + + + + D + + ++ Q + Sbjct: 60 SVIGSDDTSSIKETVDPEETQQTDTDDQEKKLSELKSEVDKYLQNSEM 107 >gi|110632645|ref|YP_672853.1| flagellar motor protein MotB [Mesorhizobium sp. BNC1] gi|110283629|gb|ABG61688.1| OmpA/MotB [Chelativorans sp. BNC1] Length = 452 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 110/276 (39%), Gaps = 1/276 (0%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 + + + + + + S + + + ++ +++ Sbjct: 178 EAYRDPFAPDFWSQQVAMPRIGVEGDPDEAREQPSGADIKAEQTGQHQLAGIEPEQETSD 237 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + KN + +D +S EE Sbjct: 238 ALSLKRVPQVEPLAPEEKNEPATEGVP-EDGVQSASPGNESASEEVSATAGEPDAPANEK 296 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + A ++ L + + V G+LIS+ D MF S++P Sbjct: 297 ANEAHENAAAGIRAALAQALNGEGLASSVTVSAGEEGVLISVTDDIRNGMFPVGSAVPER 356 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + ++KIG+ LA I I GHTDA PFR+ DNWRLS RA++A +L++ G+ E Sbjct: 357 ALVGAMEKIGKTLAGQPGTIRIHGHTDARPFRSDTYDNWRLSTARAHAAQYMLIRGGLDE 416 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 RI++++GFA +LK P+ ANRRI+IL+E Q Sbjct: 417 TRITEVAGFADRKLKEPESPLADANRRIEILLEVPQ 452 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 82/221 (37%), Gaps = 11/221 (4%) Query: 5 GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 +++ + II+++ +D+ ++ G WKI +ADFMT +M FFLVMW+INA ++ T+ A Sbjct: 4 ATEDERQPEIIIVRRGGDDEDSEHHGGVWKIAFADFMTAMMCFFLVMWLINAANEQTRAA 63 Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + YFNP ++ +E + S D G + + Sbjct: 64 LASYFNPVKLIDRNTNRKGLEEVGQGPQVSTEADQSEKSTDQPSGENDKTSGPADFQNAT 123 Query: 125 QRLE-----------NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + N L+ +++R E G + + + Sbjct: 124 DLADTRKYSDQNFFSNPYAVLAEIAADVGQDQNVSRKGEGGVQIAGPSSGASGGEAYRDP 183 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 F P +++ + + + + + A+ + Sbjct: 184 FAPDFWSQQVAMPRIGVEGDPDEAREQPSGADIKAEQTGQH 224 >gi|124009612|ref|ZP_01694285.1| thrombospondin type 3 repeat:OmpA/MotB [Microscilla marina ATCC 23134] gi|123984753|gb|EAY24733.1| thrombospondin type 3 repeat:OmpA/MotB [Microscilla marina ATCC 23134] Length = 493 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 97/273 (35%), Gaps = 8/273 (2%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P +L KG + P++ + D + TK ++LK K +++ Sbjct: 225 PDKADLCPDVKGGKKTKGCPDKDNDGVADKDDECPNTKGEINLKGCPDADKDGVPDKDDD 284 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + C +S KD C N + + +K +K Sbjct: 285 CPDVKGLVTLKGCPDSDGDGIPDKKDDCPDVKGSTKYNGCPDTDGDGI-IDKKDDCPKKA 343 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L + G+ + ++++ + +F +I P + Sbjct: 344 GLAEFNGCPDRDKDGVPDKVDNCPDVPGVKDNRGCPEVLERASKVLFAPGKAIINPVSFP 403 Query: 251 VLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 VL ++ E+L + I + GHTD N +LS DRA + L+K G+++ RI Sbjct: 404 VLNELSELLKKYASTKIYLEGHTDNQ---GDDDANLKLSKDRAQAVADYLIKKGIAKSRI 460 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 +GF + + NRR+D+ + + Sbjct: 461 ES-TGFGETKPIADNKTAAGRKKNRRVDMKLTN 492 >gi|120437695|ref|YP_863381.1| thrombospondin repeat-containing OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] gi|117579845|emb|CAL68314.1| OmpA/MotB family outer membrane protein containing thrombospondin 3 repeats [Gramella forsetii KT0803] Length = 472 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 90/301 (29%), Gaps = 19/301 (6%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 I T + K F+ G + GI + D + + Sbjct: 169 IALTLESKYKH---TFDTDGAQHFQHAAGIKFMFGGTDSDGDGIYDKDDECPEQPGLEEF 225 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + ++ + + + C +S D C +N + Sbjct: 226 NGCPDTDGDGIEDRQDACPNEAGLAEFDGCPDSDGDGVADPDDDCPEVAGLAEMNGCPDA 285 Query: 174 FLPPLSKEKILAMKRKKRLQ---------DLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + ++ + D + + Sbjct: 286 DGDGVRDDEDNCPDEAGPAENDGCPWADTDGDGVLDKDDDCPEEAGPAASNGCPEPTAEV 345 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARD 283 + + + T +FD + + PE+ LQ I +++ T + I GHTD+ Sbjct: 346 ISELNEYSKTVLFDLNKATIRPESEEALQSIHDIMHEYSTTIFHIEGHTDS---SGSDSY 402 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 N +LS +RA S L ++G+ R++ G+ + + NRR++I ++ Sbjct: 403 NMKLSKERAASVATWLEQNGIPAKRLTS-EGYGETQPIATNSTAKGRQDNRRVEISLDKD 461 Query: 342 Q 342 + Sbjct: 462 K 462 >gi|298505133|gb|ADI83856.1| OmpA family outer membrane lipoprotein [Geobacter sulfurreducens KN400] Length = 289 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 96/258 (37%), Gaps = 11/258 (4%) Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 E + DL+ + G + + + +++ + Sbjct: 33 EEADNLSKDLTTLQEKYSALSSENEGLKGTLAKLKDEAAGLALDKEKLTTDNRELQQVLQ 92 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ +L + +++ E + +++++++++K L + + Sbjct: 93 AKSDSLSQNIVELRQKVSQLEAENARLKADIASTQKAKEEKVREVSKTYEDLLDKMKGEI 152 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIR 269 V + + ++++D +FD + P + +LQK+ E+L T+ I I Sbjct: 153 AQGQVTISELKGKLTVNMVDA---ILFDSGKAEVKPAGMDILQKVVEILKDVTDKAIRIE 209 Query: 270 GHTDASPFRN----IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 GHTD NW LS RA + + L G+ +S ++ + + +D Sbjct: 210 GHTDNVQIVGNLAKRFPSNWELSSARAINVTRFLQSRGIDPAVLSAVA-YGEYHPVAPND 268 Query: 326 PMN--SANRRIDILVEDR 341 + NRRI+I++ + Sbjct: 269 TDEGKAKNRRIEIILVPK 286 >gi|125974911|ref|YP_001038821.1| OmpA/MotB [Clostridium thermocellum ATCC 27405] gi|281418623|ref|ZP_06249642.1| OmpA/MotB domain protein [Clostridium thermocellum JW20] gi|125715136|gb|ABN53628.1| OmpA/MotB [Clostridium thermocellum ATCC 27405] gi|281407707|gb|EFB37966.1| OmpA/MotB domain protein [Clostridium thermocellum JW20] Length = 266 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 89/328 (27%), Gaps = 73/328 (22%) Query: 19 KKVAIDDTP--NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K DD P W Y+D +T+++ FF++++ ++ + + + + Sbjct: 5 RKQLTDDEPASEGAPEWLQTYSDMVTLVLTFFVLLFSMSTISKEKFEQLSSSLSAAFMGT 64 Query: 77 MTASK-GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 G D D+ D N + I Sbjct: 65 GRGGVYGYNDGTVLYSVKENTTGDILEDGEEAFNEGKSAEIGAFTGGNADKEAQKIEDFI 124 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 N Q+ + L K + +KS+ N + + + K+ L+ + Sbjct: 125 NEVQNIVEEMDLDE-------YVKVIEDDKSLTVRMNSVILFDLGKADIKEPGKETLRKI 177 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I V + NT +F Sbjct: 178 GTLIKQLNKNAVIQGHTDNLPI---------------NTMLFPT---------------- 206 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISG 314 NW LS RA + L+ GV +++ +G Sbjct: 207 ----------------------------NWELSTKRATNVVLFLVDECGVDPVKLTA-TG 237 Query: 315 FAHHRLKIASDPM--NSANRRIDILVED 340 R +D NRRIDI++E Sbjct: 238 NGEFRPIAPNDTEENRQKNRRIDIVIEK 265 >gi|256003832|ref|ZP_05428819.1| OmpA/MotB domain protein [Clostridium thermocellum DSM 2360] gi|255992170|gb|EEU02265.1| OmpA/MotB domain protein [Clostridium thermocellum DSM 2360] gi|316939122|gb|ADU73156.1| OmpA/MotB domain protein [Clostridium thermocellum DSM 1313] Length = 266 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 89/328 (27%), Gaps = 73/328 (22%) Query: 19 KKVAIDDTP--NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K DD P W Y+D +T+++ FF++++ ++ + + + + Sbjct: 5 RKQLTDDEPASEGAPEWLQTYSDMVTLVLTFFVLLFSMSTISKEKFEQLSSSLSAAFMGT 64 Query: 77 MTASK-GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 G D D+ D N + I Sbjct: 65 GRGGVYGYNDGTVLYSVKENTTGDILEDGEEAFNEGKSAEIGAFTGGNADKEAQKIEDFI 124 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 N Q+ + L K + +KS+ N + + + K+ L+ + Sbjct: 125 NEVQNIVEEMDLDE-------YVKVIEDDKSLTVRMNSVILFDLGKADIKEPGKETLRKI 177 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I V + NT +F Sbjct: 178 GTLIKQLNKNAVIQGHTDNLPI---------------NTMLFPT---------------- 206 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISG 314 NW LS RA + L+ GV +++ +G Sbjct: 207 ----------------------------NWELSTKRATNVVLFLVDECGVDPVKLTA-TG 237 Query: 315 FAHHRLKIASDPM--NSANRRIDILVED 340 R +D NRRIDI+++ Sbjct: 238 NGEFRPIAPNDTEENRQKNRRIDIVIDK 265 >gi|83589323|ref|YP_429332.1| OmpA/MotB [Moorella thermoacetica ATCC 39073] gi|83572237|gb|ABC18789.1| OmpA/MotB [Moorella thermoacetica ATCC 39073] Length = 249 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 A + +LA+ + + + + V T G+++S+ D +F K S+ Sbjct: 79 APAPGQGDEGAELARARAELQQYIQQEGLESQVTLNTEERGLVVSVADA---VLFPKGSA 135 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM- 300 PE +L+++G LA + + GHTD P A NW LS RA + +VL+ Sbjct: 136 DLTPEARDLLRQVGRALARLPNYLRVEGHTDNLPINTPAFPSNWELSTARATNVVKVLIS 195 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 ++G+ +R+S +G+ +R ++ + NRR+DI+V Sbjct: 196 EAGIKPERLSA-TGYGEYRPVAPNNSEADMARNRRVDIVVLK 236 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 3/99 (3%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 ++++ + W + Y+D +T+LM FF+VM+ I+ T+ A+ Sbjct: 3 VRREGHASKDNH--ERWLLTYSDLITLLMIFFVVMYAISDTNAQKMAALANSLAQTLTGA 60 Query: 77 MTASKGIFDEQNPPERS-SQNKIDLSIDEHITKNSVDLK 114 T + + + +L+ Sbjct: 61 PTTGILTSGGLTSIVPGIAPAPGQGDEGAELARARAELQ 99 >gi|119714995|ref|YP_921960.1| OmpA/MotB domain-containing protein [Nocardioides sp. JS614] gi|119535656|gb|ABL80273.1| OmpA/MotB domain protein [Nocardioides sp. JS614] Length = 302 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 112/327 (34%), Gaps = 61/327 (18%) Query: 18 KKKVAIDDTPNN--LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 +++ + P + W + YAD +T+LM F+VM+ ++ D+ A++ Sbjct: 6 RRRKKPPEEPEHDNHERWLVTYADMLTLLMVLFIVMFAMSQVDEAKYNALKSGL------ 59 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + S+ LE+N+ Sbjct: 60 ----------------------------------AEGFGAESSIMTGSTSVLEDNLAETG 85 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 S ++ D ++ + + + L + A KRL+ + Sbjct: 86 PDYVSSQAFQAMPADQQQLVRAAVTAEERR-----------RLQAQYAEAAAEAKRLEAV 134 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K++ L + K V G+++S++ + +F+ + V+ + Sbjct: 135 RKQLMKALRAA---GLAKDVQATIDDRGLVVSLVSR--HVVFEPDIAQLSARGERVVDTL 189 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 VL + I GHT+ P + +W LS RA + + L + G + +S Sbjct: 190 SRVLRDVPNALRIDGHTNQEPVKPRFFATDWDLSAARAVTVLRRLNEHGDVPKKRLSLSA 249 Query: 315 FAHHRLKIASDPMNSA--NRRIDILVE 339 F + R + S N+R+DI+V Sbjct: 250 FGNERPLVDPATPGSQEINKRVDIVVL 276 >gi|254519159|ref|ZP_05131215.1| OmpA/MotB domain-containing protein [Clostridium sp. 7_2_43FAA] gi|226912908|gb|EEH98109.1| OmpA/MotB domain-containing protein [Clostridium sp. 7_2_43FAA] Length = 242 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 11/181 (6%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + K L +++LQ + +++ + L + V G++ Sbjct: 62 GSAENSGSSSDEQGELKPLVQTEEEKLQGIESQVNDIVKDLELEG---SVTTSIEERGLI 118 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DN 284 IS D FD + + E L + +L + + GHTD P N Sbjct: 119 ISFTDN---VFFDSAKADIKEELKPKLISVSNILNKIDNYVRVEGHTDNLPISTSDYHSN 175 Query: 285 WRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 W+LS RA + + L+ G +S R+S + G+ +R + + + NRR+DIL+ + Sbjct: 176 WQLSSVRASNVVEFLISYGSISPSRLSAV-GYGEYRPVADNTAEEGRAKNRRVDILILNN 234 Query: 342 Q 342 + Sbjct: 235 K 235 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + P N W + Y+D +T+LM FF+V++ ++ ++ K + + Sbjct: 2 KKRVEKPENHERWLLTYSDLITLLMIFFVVLYSASSVNESKYKQLATSMGDVFIGGYSVL 61 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + + + + K + +E + Sbjct: 62 GSAENSGSSSDEQGELKPLVQTEEEKLQGIESQ 94 >gi|218509333|ref|ZP_03507211.1| flagellar motor protein MotB [Rhizobium etli Brasil 5] Length = 228 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 119/227 (52%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 + + + + E + +++ GK EK E+N Sbjct: 2 ATEVAKAEDMKPVPLATDQKPAKDAKESKETKGAPETKGGKATDGKAPDEKKAEAEKNAD 61 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + + +R+K+ D ++ + G VA + +G+ + G+L+SI DQ + Sbjct: 62 HQKDADKSAAETERQKKEADELQQQIAQQIGGVAGKLAEGLTVTASEGGLLVSISDQNDD 121 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 MF+ S++P E ++ +++IG +L +++RGHTD ++ +NWRLS+DRA S Sbjct: 122 SMFNIGSAVPRQEMVLAMERIGTILKERGGAVAVRGHTDGRQYKGGQNENWRLSMDRAQS 181 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 AY +L++ G+ E RIS++SGFA RLK+ +DP N+ANRRI+ILV+ Sbjct: 182 AYYMLVRGGLDEKRISQVSGFADRRLKLPADPFNAANRRIEILVQAD 228 >gi|88704268|ref|ZP_01101982.1| flagellar motor protein MotB [Congregibacter litoralis KT71] gi|88701319|gb|EAQ98424.1| flagellar motor protein MotB [Congregibacter litoralis KT71] Length = 272 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 101/324 (31%), Gaps = 67/324 (20%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + ++ +N W + YADF+T+L AFF+VM+ G + + Sbjct: 3 RRKPPESVDNHERWLVSYADFITLLFAFFVVMY-------------STSAVNVGNFRVLS 49 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + P ++ D + L Sbjct: 50 DSIVRAFGLPGVSYDPSRPDGDGTQSSRIGLPQLDA------------------------ 85 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 ++ S A+ + +++A Sbjct: 86 -----------------------ERDAVRVPLQAAANSASTNPNAALGDIQAEEEIAGVE 122 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 ++ S + + + I I + +F S L +I +LQ++ E L Sbjct: 123 TALQSAVGDLVAPDRLAITGNDKWLEIKIPARM---LFPSGSRSLLASSIPMLQRLAETL 179 Query: 260 AHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + ++GHTD P R NW LS RA + +V G+ R+S + GF + Sbjct: 180 GGLPNEVVVQGHTDNQPIRNGQFPSNWELSTARAAAVARVFEDEGIDPSRLSAV-GFGPN 238 Query: 319 RLKIASDPM--NSANRRIDILVED 340 R + + NRR+ ILV Sbjct: 239 RPITDNLTEESRAENRRVVILVRS 262 >gi|85859043|ref|YP_461245.1| chemotaxis protein [Syntrophus aciditrophicus SB] gi|85722134|gb|ABC77077.1| chemotaxis protein [Syntrophus aciditrophicus SB] Length = 254 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 1/150 (0%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 +DL +I + + V+ G+ I I+D+ + MF S+ P + +L Sbjct: 106 KDLEHRIKIAIDE-KLQTLKDQVMVSIVDNGLKIQIVDKEGSLMFPLGSAEPTFKAKEIL 164 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + + E L S I + GHTDA+PFR+ NW LS RA +A + L + + RI+++ Sbjct: 165 RIVSENLKDSPNRIIVEGHTDAAPFRSAQTTNWELSTARASAARRELENNSIDPGRIARV 224 Query: 313 SGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 G+A L I +PM++ NRRI I+V + Sbjct: 225 IGYADQELFIPQNPMDARNRRISIIVIQPK 254 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + III+K ++ GSWK+ YADF+T +MAFFL++W+I + + A+ +Y Sbjct: 2 DDQQPVIIIRKVKKRHHDGHHGGSWKVAYADFVTAMMAFFLLLWLITMVSPEKRSAVAEY 61 Query: 69 FNPFGK 74 F F Sbjct: 62 FKTFSV 67 >gi|254491758|ref|ZP_05104937.1| OmpA family protein [Methylophaga thiooxidans DMS010] gi|224463236|gb|EEF79506.1| OmpA family protein [Methylophaga thiooxydans DMS010] Length = 306 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 50/329 (15%), Positives = 105/329 (31%), Gaps = 75/329 (22%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + ++K + + W + YADF+T+ ++ Sbjct: 1 MARRKKHEEHENH--ERWLVSYADFITL-------LFAFFVV-----------MYSISSV 40 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + + D + I++ L Sbjct: 41 NEGKYRVLSDTLEAVFSDPVRSKNPIQIGEISRGEGKLTAE------------------- 81 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + I+ E PP + E + +++L Sbjct: 82 ---------------------PGEPEKADYKIDLPEIPHRPPPATE-----NDIRTIKEL 115 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K++S L+ ++ + V+ + + + I ++ +F+ + + V+ KI Sbjct: 116 TKQLSGALADMIE---TEDVIIKQGEDWLELEI---KSRVLFESGEARLERAAVPVIGKI 169 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++L S I + G TD +P NW LS RA S +L + G+ DR+S I G Sbjct: 170 ADILQTSANPIQVEGFTDNNPINTSRFPSNWELSAARAASVVHLLDRYGIQPDRMSAI-G 228 Query: 315 FAHHRLKIASDPMNSA--NRRIDILVEDR 341 + ++ + NRR+ ++V Sbjct: 229 YGEYKPIADNATEEGRQKNRRVVLVVLGS 257 >gi|221640801|ref|YP_002527063.1| chemotaxis MotB protein [Rhodobacter sphaeroides KD131] gi|221161582|gb|ACM02562.1| chemotaxis MotB protein [Rhodobacter sphaeroides KD131] Length = 285 Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 126/338 (37%), Gaps = 62/338 (18%) Query: 5 GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 G Q N ++IK+K + ++ G+WK+ YADF+T +MAFF ++ + + ++ Sbjct: 7 GMAGQSNAAPVVIKRKKVVQGGGHHGGAWKVAYADFVTAMMAFF-MLMWLLNATTEKQR- 64 Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 KG+ D NP ++ D + T Sbjct: 65 ----------------KGLADYFNPTIPMNRVSGGGEGAFGGNSVFHDQTMTQTGTGAAN 108 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 R ++ Sbjct: 109 DR------------------------------------------ATAERKARGEMGQEGA 126 Query: 185 AMKRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 +K+L+++ K + + + + +++ V+ T G++I I D + P+F + Sbjct: 127 DAAEQKQLEEVEKMLKARSGESMTMQRLLRHVVTRITDEGLVIEIFDLPDVPLFFGDTDQ 186 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 P + + + E+L +T I++ GH + P I W +S RA +L G Sbjct: 187 PEAVLPQIARLLAEILPITTNRIAVNGHMRSYPITLIRNPVWDISAARAQRMRGLLESEG 246 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 + ++R+ ++SGFA + + DPM N R+++++ R Sbjct: 247 LPDERMQRVSGFADRK-IVTPDPMAVRNNRLEVILLRR 283 >gi|89100104|ref|ZP_01172973.1| flagellar motor protein [Bacillus sp. NRRL B-14911] gi|89085194|gb|EAR64326.1| flagellar motor protein [Bacillus sp. NRRL B-14911] Length = 229 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 73/185 (39%), Gaps = 7/185 (3%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 D SI EN + ++ + L + L + + ++ T Sbjct: 42 MDFYPSIIPFENPSENDKNVVNQGPDSDRQEEERLENLLQEVEGYLEKNGLEDVIVANRT 101 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN- 279 G+++ + +Q +F+ + + L K+G +L ++ + GHTD P Sbjct: 102 ERGVVLVLQEQ---VLFESGEAEIIDRNSGFLDKVGSLLVGMPNLVKVEGHTDNRPIATY 158 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 NW LS RA S + L +GV R + G+ R + +D NRR++++ Sbjct: 159 RYPSNWELSAARASSVIRYLAGTGVDSKRFIAV-GYGDTRPLVPNDSAENLEKNRRVEVI 217 Query: 338 VEDRQ 342 + D + Sbjct: 218 ISDPR 222 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 37/85 (43%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 + ++D +T+++ FF++++ ++ D KA+ + F S F+ + +++ Sbjct: 1 MVTFSDLVTLILVFFILLFSMSQIDIVKFKAVSESFQDKQFMDFYPSIIPFENPSENDKN 60 Query: 94 SQNKIDLSIDEHITKNSVDLKIGST 118 N+ S + + L+ Sbjct: 61 VVNQGPDSDRQEEERLENLLQEVEG 85 >gi|254504256|ref|ZP_05116407.1| OmpA family protein [Labrenzia alexandrii DFL-11] gi|222440327|gb|EEE47006.1| OmpA family protein [Labrenzia alexandrii DFL-11] Length = 471 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 103/277 (37%), Gaps = 3/277 (1%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 + + + ++ +++ + Sbjct: 191 EAYRDPFDPQFWQFRPGRGVDGAAAETAGLPTRPGSGNGAGQSADQADGDKSWNAPFETD 250 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + + + D + +++ + E Sbjct: 251 GSTELAQTKSGTGPTSETGTTSGDGPSEFTGTSKNQIVAHVSRRDQETSLAAEAEGGATE 310 Query: 187 KRKKRLQDLAKKISSTLSGLVA---DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 L ++++ L +N + G LIS+ D +N MF S+ Sbjct: 311 AETVPGALLVAELTTVLDAAEGTLLENTAAQITVVRQDDGALISLTDDQNFGMFAIGSAE 370 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 P PE + +L+++G+V++ + I I GHTDA PF++ DNWRLS RA+ A +L + G Sbjct: 371 PRPELVSLLERLGKVISKTGAQIVITGHTDARPFKSKTYDNWRLSSARAHMALYMLSRGG 430 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 V DR +I G A LK A DP ++NRR++I + + Sbjct: 431 VGADRFVRIEGAADRHLKNAEDPFAASNRRVEIYLLE 467 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 80/203 (39%), Gaps = 9/203 (4%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 ++ +I++++ DD G WKI YADFMT LMAFFLVMW+IN TD+ ++ + QYFNP Sbjct: 3 NEIVIVRRRHNWDDDEKPHGVWKIAYADFMTALMAFFLVMWLINVTDESVRRGVAQYFNP 62 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 ++ + ++ +E+ TK G+ Q+ +R Sbjct: 63 VKLASTAPNRKGL---------NDPIVNGDTNENGTKLFTGKLGGTDEQESTLERSGEAD 113 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 S + ++ + E + + L L+++ +A + Sbjct: 114 VETEGVNASGAAEMKAAAGAQAASGEFTQSHPESILFTDPYAVLDTLAQKINVARTMESN 173 Query: 192 LQDLAKKISSTLSGLVADNIVKG 214 + + + L + Sbjct: 174 PEGIGSGLEKEQGALGGEAYRDP 196 >gi|163742566|ref|ZP_02149952.1| chemotaxis protein MotB [Phaeobacter gallaeciensis 2.10] gi|161384151|gb|EDQ08534.1| chemotaxis protein MotB [Phaeobacter gallaeciensis 2.10] Length = 278 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 105/310 (33%), Gaps = 58/310 (18%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 +WK+ YADF+T +MAFF++MW++NAT + +K + YF+P + G Sbjct: 27 AWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADYFSPSIPLSRVSGGG------NGA 80 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 + + I + D+ Q K +E + + +Q + L Sbjct: 81 FNGDSMFTEEIKPQNGTGASDISPADAQQAKGDSGVEQDKDREAADEQFRALEEQLKGRG 140 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + + + +E + E+ K Sbjct: 141 GESMVSIEMAQHIITRVTDEGLVVELFDTEESPLFKE----------------------- 177 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 ++ P +++ + V I+I GH Sbjct: 178 ----------------------------GTAEPTLLFRDIVKMVSRVTGVVENNIAIGGH 209 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331 + W LS RA + +L G R+ +++G A +L ++ PM++ N Sbjct: 210 IRSHAVVVANNPVWELSHARADATRVMLESGGTKSKRMHRVTGHADRKLTDSN-PMSARN 268 Query: 332 RRIDILVEDR 341 R++I++ + Sbjct: 269 NRVEIILLRK 278 >gi|77164352|ref|YP_342877.1| flagellar motor protein MotB [Nitrosococcus oceani ATCC 19707] gi|254433318|ref|ZP_05046826.1| OmpA family protein [Nitrosococcus oceani AFC27] gi|76882666|gb|ABA57347.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707] gi|207089651|gb|EDZ66922.1| OmpA family protein [Nitrosococcus oceani AFC27] Length = 280 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 80/305 (26%), Gaps = 71/305 (23%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 + +W I AD M++LM+FF+++ + D K + K Sbjct: 12 SQEERTGAPAWVITLADLMSLLMSFFVLLLSFSEMDVLKYKQVAGSM-----------KF 60 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 F Q + K I + Sbjct: 61 AFGVQREIKVKEPPKGTSIIAQ-------------------------------------- 82 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 E + T + + L + + +L K+ Sbjct: 83 ---------EFSPGRPRPTPWNEIRQDTIDETKQTLDFSDAPTQDTEAEVAELQDKLQHE 133 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + + R F S+I E L KI +L Sbjct: 134 IDEGLITIETIKDRIIIRI----------REKGSFPSGSAIFSQEFKPALDKIRAILKKI 183 Query: 263 TEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320 + + GHTD P R NW LS RA S L+ +S R + G+A + Sbjct: 184 EGKLIVAGHTDNMPIQTTRFRSNWELSTARAVSVVHYLLATHEISPRRFV-LEGYADTQP 242 Query: 321 KIASD 325 ++ Sbjct: 243 LAPNE 247 >gi|224368748|ref|YP_002602909.1| MotB1 [Desulfobacterium autotrophicum HRM2] gi|223691464|gb|ACN14747.1| MotB1 [Desulfobacterium autotrophicum HRM2] Length = 269 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 8/214 (3%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 +F +S +QQ + + S G T + + P +KI + Sbjct: 49 LFAMSTTQQETFKELVESLRSALGVQSVPETGTREGLTMHAVPSEEPTDNQKIDELGGMV 108 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +++ + S ++ + + V + TG++I++ D +F +I + Sbjct: 109 E-KEIREIASEVREMILFNKLGGLVNVSESETGVVITMSD---LLLFSAGEAILSEKGAD 164 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L K+ VLA + ++GHTDASP NW LS RA + ++L+ SG+ + Sbjct: 165 ILNKVTAVLAQLAYHVKVKGHTDASPISTGRYPSNWELSASRAAAVVKLLVASGLDPS-L 223 Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 G+A +R +D + NRR++I+ E Sbjct: 224 ISAEGYAQYRPVATNDTEKGRARNRRVEIVYERD 257 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 30/77 (38%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 W +AD +T+LM FF++++ ++ T +T K + + G + Sbjct: 28 SPEWMATFADLVTLLMCFFVLLFAMSTTQQETFKELVESLRSALGVQSVPETGTREGLTM 87 Query: 90 PERSSQNKIDLSIDEHI 106 S+ D + + Sbjct: 88 HAVPSEEPTDNQKIDEL 104 >gi|78485775|ref|YP_391700.1| OmpA/MotB [Thiomicrospira crunogena XCL-2] gi|78364061|gb|ABB42026.1| Flagellar motor protein MotB [Thiomicrospira crunogena XCL-2] Length = 296 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 4/224 (1%) Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + + S++ S + Sbjct: 46 SGVNDEEMKAMAEYFRDPTVIEASPQVLVPSKEAGQSSDSMIDMGGFKDTPKGSIENEDG 105 Query: 181 EKILAMKRKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 E + K +++DL ++I + + + + + E T G+ + ++D R PMF Sbjct: 106 EAKA--QEKAQMEDLKRQIEQKISENPITNELKNQLKIEVTPNGLQVQVLDDRKRPMFGS 163 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQV 298 +P +L+++G VLA + ISI GHTD+S + + A NW LS DRA +A ++ Sbjct: 164 GVDLPKDYAAKLLKEVGSVLAQTNNRISIAGHTDSSGYHSNAEYTNWELSADRANAARRL 223 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 L+ GV E +I+++ G + +P N NRRI I+V +++ Sbjct: 224 LLDGGVGEKKIAQVVGLSDTVPFDKENPYNPRNRRISIIVLNKE 267 >gi|258510423|ref|YP_003183857.1| OmpA/MotB domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477149|gb|ACV57468.1| OmpA/MotB domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 271 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 10/228 (4%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 ST K ++ L +++ + Q T E G + N Sbjct: 38 STIDKTRFATLAESLYQALHPGQQIPLNMGTTALLESGDQNNGQQFPDNLQNPNNPSNAT 97 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 +++ + K+L L ++I ++ ++ V G+ I++ D + Sbjct: 98 TQNQQSNEDLTDAKQLDLLYREIQQYIASH---HLSGEVQVIDEARGVQITMRD---VAL 151 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295 F+ ++ LP+ +++ + + I + G+TD P NW LS RA S Sbjct: 152 FNTGQAVLLPKAKAIIEGLIPFFKQISNDIVVEGYTDTQPINTPIYPSNWELSAARAMSV 211 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + L G++ R+ G+ + ++ NRR++I++ + Sbjct: 212 VRFLADHGINPTRL-AGMGYGQYHPVASNATPAGRQANRRVNIVILRK 258 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ N+ W + Y+D +T+L+ FF+VM+ ++ D + + Sbjct: 3 RRKKPKHKQNH-ERWLVTYSDLITLLLVFFVVMFAMSTIDKTRFATLAESLYQAL---HP 58 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + + S ++ + +N + +T ++ + L + Sbjct: 59 GQQIPLNMGTTALLESGDQNNGQQFPDNLQNPNNPSNATTQNQQSNEDLTD 109 >gi|218290401|ref|ZP_03494531.1| OmpA/MotB domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218239529|gb|EED06723.1| OmpA/MotB domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 271 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 10/228 (4%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 ST K ++ L +++ + Q T E G + N Sbjct: 38 STIDKTRFATLAESLYQALHPGQQIPLNMGTTALLESGDQNNGQQFPDNLQNPNNPSNAT 97 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 +++ + K+L L ++I ++ ++ V G+ I++ D + Sbjct: 98 TQNQQSNEDLTDAKQLDLLYREIQQYIASH---HLSGEVQVIDEARGVQITMRD---VAL 151 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295 F+ ++ LP+ +++ + + I + G+TD P NW LS RA S Sbjct: 152 FNTGQAVLLPKAKAIIEGLIPFFKQISNDIVVEGYTDTQPINTPIYPSNWELSAARAMSV 211 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + L G++ R+ G+ + ++ NRR++I++ + Sbjct: 212 VRFLADHGINPTRL-AGMGYGQYHPVASNATPAGRQANRRVNIVILRK 258 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ N+ W + Y+D +T+L+ FF+VM+ ++ D + + Sbjct: 3 RRKKPKHKQNH-ERWLVTYSDLITLLLVFFVVMFAMSTIDKTRFATLAESLYQAL---HP 58 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + + S ++ + +N + +T ++ + L + Sbjct: 59 GQQIPLNMGTTALLESGDQNNGQQFPDNLQNPNNPSNATTQNQQSNEDLTD 109 >gi|87120689|ref|ZP_01076582.1| flagellar motor protein [Marinomonas sp. MED121] gi|86163917|gb|EAQ65189.1| flagellar motor protein [Marinomonas sp. MED121] Length = 292 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 100/287 (34%), Gaps = 40/287 (13%) Query: 57 TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116 D K + F Q E S I + + + Sbjct: 1 MDVLKFKQLAGSMREA-----------FGVQKQIEAKSIPTGTSIIAQEFSPGKPEPTPI 49 Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 + ++K +R EN + L + + + + + D Sbjct: 50 NEVRQKVDERPENTLEVLCKPGEDDLNEKEGVGAQGEAYVDKSTAD-------------- 95 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 ++R+K+++ + S L + V ET I I + ++ Sbjct: 96 ---------LEREKQVKQTEEDAKQISSVLREEISKGTVEVETQERTITIRLKEK---GS 143 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSA 295 F+ S+ + I ++ I +VL I++ GHTD P NW+LS RA S Sbjct: 144 FESGSAELNFDFIPIIDMIRDVLIGIQGTIAVEGHTDNIPVNSGRFGSNWQLSSARAISV 203 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 + L +G E + ++G+A R +D ++NRR++++++ Sbjct: 204 AEELFATGQLEQKRFSVTGYADTRPLAPNDTFFNRASNRRVELIIKQ 250 >gi|20807043|ref|NP_622214.1| flagellar motor protein [Thermoanaerobacter tengcongensis MB4] gi|254479612|ref|ZP_05092920.1| OmpA family protein [Carboxydibrachium pacificum DSM 12653] gi|20515530|gb|AAM23818.1| Flagellar motor protein [Thermoanaerobacter tengcongensis MB4] gi|214034455|gb|EEB75221.1| OmpA family protein [Carboxydibrachium pacificum DSM 12653] Length = 237 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 8/158 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + +L + + + + N+ V G+++S+ D +FD S+ PE Sbjct: 75 AENKDNLGEVQAQLQAFIKESNLQGMVSTYRDERGLVVSLQDTL---LFDLGSADVHPEE 131 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSE 306 VL KIG++L + I + G TD P N NW LS+ RA + ++L+ G+ Sbjct: 132 KEVLIKIGKMLKNLPNYIRVEGFTDDLPIHNQKFDSNWELSVIRATTVVKILVNEVGIEP 191 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RIS + G+ +R + +D NRR+DI++ + + Sbjct: 192 QRISAV-GYGEYRPIVPNDSEEHRRLNRRVDIVIMNTE 228 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 14/121 (11%), Positives = 41/121 (33%), Gaps = 5/121 (4%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + D++ N W + Y+D +T+L+ FF+VM+ ++ + + + Sbjct: 2 RRLEDESKPNHERWLLTYSDMITLLLIFFIVMYTMSTLNAAKFAQLAGSLSKTF-----T 56 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + + + + + + I +N + + + + Q Sbjct: 57 GTNYILGKYSGKSVVPGNAENKDNLGEVQAQLQAFIKESNLQGMVSTYRDERGLVVSLQD 116 Query: 140 S 140 + Sbjct: 117 T 117 >gi|146305660|ref|YP_001186125.1| flagellar motor protein MotB [Pseudomonas mendocina ymp] gi|145573861|gb|ABP83393.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 329 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 71/334 (21%), Positives = 126/334 (37%), Gaps = 63/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q II+K+ ++ G+WKI +ADF Sbjct: 2 ENNQPIIVKRVKKNA-GGHHGGAWKIAFADF-------------------------ATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F + S +++ Q+ I + + + + +G + + L Sbjct: 36 MAFFLVMWLMSSATPEQKKAISGYFQDPIGFTE----SASPHAIDLGGSPTPAPDRTLNP 91 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 I L+ S+ + + ++R+ Sbjct: 92 EIQDLTESRDVD--------------------------------IDADQVESLADKLERE 119 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + L + + +LFE T+ G+ I I+D N PMF S+ P Sbjct: 120 RLELVLQELQNKVEENPELQRFKDQILFEITQDGLRIQIVDAENRPMFALGSANLQPYFE 179 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + ISI GHTDA PF NW LS +RA +A + L+ G ++++ Sbjct: 180 DILLAMADTIRAVPNKISISGHTDAKPFVGRGDFGNWELSANRANAARRALIAGGYADEQ 239 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ G+A L +DP N NRRIDI+V ++ Sbjct: 240 VARVVGYASSALFDRNDPFNPVNRRIDIVVLTKK 273 >gi|326389648|ref|ZP_08211214.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200] gi|325994363|gb|EGD52789.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200] Length = 237 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 9/149 (6%) Query: 199 ISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I L+G + +N + V G++IS+ D +FD S+ PE VL KIG Sbjct: 84 IEKQLNGFIKENNLQGMVTSYIDERGLVISMQDSL---LFDLGSADVHPEEKDVLIKIGN 140 Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315 +L I + G TD P N NW LS+ RA + ++L+ G+ RIS + G+ Sbjct: 141 MLKTLPNHIRVEGFTDDLPIHNSKFDSNWELSVIRATNVVKILVNEVGIEPQRISAV-GY 199 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +R + +D NRR+DI++ + + Sbjct: 200 GEYRPVVPNDSEEHRRLNRRVDIVIMNTE 228 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 4/90 (4%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K D++ N W + Y+D +T+L+ FF+VM+ I+ + I + T Sbjct: 2 KRLEDESKPNHERWLLTYSDMITLLLIFFIVMYTISTINATKFAQIASSLSKTF----TG 57 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 + + + + N D + I K Sbjct: 58 TDYVIGQYSGSSFVQGNSGDKNSLGEIEKQ 87 >gi|307265590|ref|ZP_07547144.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306919388|gb|EFN49608.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 237 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 9/149 (6%) Query: 199 ISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I L+G + +N + V G++IS+ D +FD S+ PE VL KIG Sbjct: 84 IEKQLNGFIKENNLQGMVTSYIDERGLVISMQDSL---LFDLGSADVHPEEKDVLIKIGN 140 Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315 +L I + G TD P N NW LS+ RA + ++L+ G+ RIS + G+ Sbjct: 141 MLKTLPNHIRVEGFTDDLPIHNSKFDSNWELSVIRATNVVKILVNEVGIEPQRISAV-GY 199 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +R + +D NRR+DI++ + + Sbjct: 200 GEYRPVVPNDSEEHRRLNRRVDIVIMNTE 228 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 4/90 (4%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K D++ N W + Y+D +T+L+ FF+VM+ I+ + I + T Sbjct: 2 KRLEDESKPNHERWLLTYSDMITLLLIFFIVMYTISTINATKFAQIASSLSKTF----TG 57 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 + + + + N D + I K Sbjct: 58 TDYVIGQYSGSSFVQGNSGDKNSLGEIEKQ 87 >gi|262172094|ref|ZP_06039772.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451] gi|261893170|gb|EEY39156.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451] Length = 279 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 96/288 (33%), Gaps = 31/288 (10%) Query: 57 TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116 D K I K F QN E K I + + Sbjct: 1 MDVLKFKQIAGSM-----------KFAFGVQNRLEVKDIPKGTSIIAQEFRPGRPEPTPI 49 Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 ++ + + + + K T + + + ++ Sbjct: 50 DVIMQQTIDITQQTLDFQEGDSDRAGGNQRDSG---------KLTGGQSAESSTQDNQNT 100 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 ++ A ++++ +A+ I LS + + E I I I ++ Sbjct: 101 QSEMQQQQAKAMSEQMETVAESIKKALSREIEQGA---IEVENLGQQIDIRIREK---GA 154 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295 F + S+ P+ ++++I +++ + + GHTD + R NW LS RA S Sbjct: 155 FPEGSAFLQPKFRPLVRQIADLVKDIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSV 214 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 Q + K G R+ ++ G A + +D + NRR++I + Sbjct: 215 AQEMEKVKGFDHQRL-QVRGMADTQPIGPNDTEAQRALNRRVEISILQ 261 >gi|83642951|ref|YP_431386.1| flagellar motor protein [Hahella chejuensis KCTC 2396] gi|83630994|gb|ABC26961.1| Flagellar motor protein [Hahella chejuensis KCTC 2396] Length = 275 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 64/332 (19%), Positives = 118/332 (35%), Gaps = 66/332 (19%) Query: 16 IIK-KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 +IK +K + P +W + +AD MT+L+ FF+++ ++ D + ++I + Sbjct: 1 MIKPRKQSGGLLPVGAPAWIVTFADLMTLLLTFFILLLSFSSLDAEKYRSIAYSMSKAFG 60 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 S + +++ L Sbjct: 61 VAWVPS--------------------------------------------SQGAPDMYPL 76 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + RD + +++E S++ + A RL Sbjct: 77 GGDITPTVPMEPVIRDKGDAEQPAPQSNVEPSLDLSQEVVSE-------AAYMENDRLAS 129 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 +S L + + V + G+++S ++ F S + VL K Sbjct: 130 ------RMISLLENEIEDQAVDIKFDDKGVVLSFTERAT---FASGSEELKLYMLPVLMK 180 Query: 255 IGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKI 312 + +VLA I + GHTD P + R NW LS RA S L+ G + R+S I Sbjct: 181 VTDVLADCKGDILVTGHTDDRPIDSVKFRSNWDLSAARAVSVVHRLVLDGRLDASRVSAI 240 Query: 313 SGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 G A R + +D + NRR++I +E+ + Sbjct: 241 -GQAETRPLVPNDTDEHRAQNRRVEIHIENAE 271 >gi|304321119|ref|YP_003854762.1| chemotaxis MotB protein [Parvularcula bermudensis HTCC2503] gi|303300021|gb|ADM09620.1| chemotaxis MotB protein [Parvularcula bermudensis HTCC2503] Length = 254 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 1/205 (0%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 +Q + + D + L + + + + + + Sbjct: 51 EEQRKGIADYFAPTLPVSPVSGGGKDALNGDSVLTEDTLSRSALYPADSTPKSREAKAIE 110 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + D+ + V T GI++ +ID +F SS P PE V+++ Sbjct: 111 SSVKEMAKASGLDDADERVRVTVTDEGIVVQLIDAEGKSLFPVGSSTPSPELRVLVKAAA 170 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 +A + I I GHTD+ ++ A N+ LS DRA +A ++L+++GV + R+++I+G A Sbjct: 171 SAVAAGGKKIRIVGHTDSRQYQGYAYSNFELSADRANAARRLLIEAGVDDSRLTEITGRA 230 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 + P + ANRRI I++ DR Sbjct: 231 DREPITDN-PADPANRRIAIVLLDR 254 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 1/125 (0%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 ++ IIK+K ++ G WK+ YADF+T +MAFFL+MW++NAT ++ +K I YF Sbjct: 2 SDNNPTIIKRKRITVVNGHHGGQWKVAYADFVTAMMAFFLLMWLLNATTEEQRKGIADYF 61 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSI-DEHITKNSVDLKIGSTNQKKQYQRLE 128 P + G + ++ T S + K ++ K+ + Sbjct: 62 APTLPVSPVSGGGKDALNGDSVLTEDTLSRSALYPADSTPKSREAKAIESSVKEMAKASG 121 Query: 129 NNIFY 133 + Sbjct: 122 LDDAD 126 >gi|261856274|ref|YP_003263557.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] gi|261836743|gb|ACX96510.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] Length = 323 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 100/310 (32%), Gaps = 69/310 (22%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W + D MT+L+ F+++ ++ + + T D+ P+ Sbjct: 55 WLLTMVDLMTLLLTMFVLLAAYA------YQSKDNTVTMVASSGSTQQAQKVDKTPTPQT 108 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 S E T+ ++ Sbjct: 109 GPMPTTQTSPGETPTQGNIP---------------------------------------- 128 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + + K+ ++ P + + + L + Sbjct: 129 ----QAGNALIGKAGETVLDHAKPSAQSSSANDKASQDQARAL------------FAGLG 172 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 K V + I + + D +F +S + +L+++ + L I+++GHT Sbjct: 173 KDVDVSVVKGRINLRVKDN---ILFSSGNSALSAAGMQLLKRLADRLKAGDYPIAVQGHT 229 Query: 273 DASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329 D P NW LS RA + Q L+ SGV +R+S I GFA ++D + Sbjct: 230 DNVPIHTLQFPSNWELSAARAAAVVQELIASGVQPNRLSAI-GFADTHPITSNDTASGRA 288 Query: 330 ANRRIDILVE 339 NRR+D+ ++ Sbjct: 289 ENRRVDLELQ 298 >gi|39996116|ref|NP_952067.1| chemotaxis MotB protein [Geobacter sulfurreducens PCA] gi|39982881|gb|AAR34340.1| chemotaxis MotB protein, putative [Geobacter sulfurreducens PCA] Length = 289 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 95/258 (36%), Gaps = 11/258 (4%) Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 E + +L+ + G + + + +++ + Sbjct: 33 EEADNLSKELTTLQEKYSALSSENEGLKGALAKLKDEAAGLAQDKEKLTADNRELQQVLQ 92 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ +L + +++ E + +++++++++K L + + Sbjct: 93 AKSDSLSQNIVELRQKVSQLEAENARLKADIASTQKAKEEQVREVSKTYEDLLDKMKGEI 152 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIR 269 V + + ++++D +FD + P + +LQK+ E+L + I I Sbjct: 153 AQGQVTISELKGKLTVNMVDA---ILFDSGKAEVKPAGMDLLQKVVEILKDVKDKAIRIE 209 Query: 270 GHTDASPFRN----IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 GHTD NW LS RA + + L G+ +S ++ + + +D Sbjct: 210 GHTDNVQIVGNLAKRFPTNWELSSARAINVTRFLQSRGIDPAVLSAVA-YGEYHPVAPND 268 Query: 326 PMN--SANRRIDILVEDR 341 + NRRI+I++ + Sbjct: 269 TDEGKAKNRRIEIILVPK 286 >gi|163738038|ref|ZP_02145454.1| OmpA/MotB [Phaeobacter gallaeciensis BS107] gi|161388654|gb|EDQ13007.1| OmpA/MotB [Phaeobacter gallaeciensis BS107] Length = 278 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 105/310 (33%), Gaps = 58/310 (18%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 +WK+ YADF+T +MAFF++MW++NAT + +K + YF+P + G Sbjct: 27 AWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADYFSPSIPLSRVSGGG------NGA 80 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 + + I + D+ Q K +E + + +Q + L Sbjct: 81 FNGDSMFTEEIKPQNGTGASDISPADAQQAKGDSGVEQDKDREAADEQFRALEEQLKGRG 140 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + + + +E + E+ K Sbjct: 141 GESMVSIEMAQHIITRVTDEGLVVELFDTEESPLFKE----------------------- 177 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 ++ P +++ + V I+I GH Sbjct: 178 ----------------------------GTAEPTLLFRDIVKMVSRVTGVVENNIAIGGH 209 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331 + W LS RA + +L G R+ +++G A +L ++ PM++ N Sbjct: 210 IRSHAVVVANNPVWELSHARADATRVMLESGGTRSKRMHRVTGHADRKLTDSN-PMSARN 268 Query: 332 RRIDILVEDR 341 R++I++ + Sbjct: 269 NRVEIILLRK 278 >gi|328545495|ref|YP_004305604.1| flagellar motor protein MotB [polymorphum gilvum SL003B-26A1] gi|326415236|gb|ADZ72299.1| Flagellar motor protein MotB [Polymorphum gilvum SL003B-26A1] Length = 434 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 106/271 (39%), Gaps = 15/271 (5%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 ++G + P E + E + + + S + + + + Sbjct: 177 DPLYWQFLPNRGAGAAERPIEL-AMEPARTEAAEGMPEPRPEASPESRSAEGVGKPAPPS 235 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 S + + D+ + E L + ++ Sbjct: 236 PLVASVAPSPSAKPDPNAADAVASGVSAPQAPSAAAPASPEASDLAKTAAALQADLQG-- 293 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L+ + E T G+LIS+ D ++ MF S+ P PE + Sbjct: 294 ------------LAETPLGAAASRITVERTGAGLLISLTDDQDFGMFAVGSAEPRPELVR 341 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 ++++IG L+ I IRGHTDA PFR+ DNWRLS RA+ A +L + GV R+ Sbjct: 342 LMERIGSTLSARPGRIVIRGHTDARPFRSKTYDNWRLSSARAHMALYMLARGGVDAGRVE 401 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +I G+A LK SDP ++ NRRI+I + + Sbjct: 402 RIEGYADRDLKRPSDPYSAVNRRIEIFLLEP 432 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 85/208 (40%), Gaps = 8/208 (3%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + + +I++++ A D + G WKI +ADFMT +MAFFLVMW+IN TD++ ++ + QYF Sbjct: 6 SSGEIVIVRRRPAWDADHHKGGVWKIAFADFMTAMMAFFLVMWLINVTDENVRQGVAQYF 65 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK------Q 123 NP + ++ ++ + + D + ++N + + + Sbjct: 66 NPVKLAATSPTRKGLNDAGESGDAIGEESDRPPAQGGSENKPAGPARHSTGGEYRQFYSE 125 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK--E 181 + L +S + EK + + + + + F P + Sbjct: 126 AALFSDPYAVLDTLARSITLPEAEGPAPEKAGFGTREGEGAQGGDAYRDPFDPLYWQFLP 185 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVAD 209 A ++ ++ + + + + + Sbjct: 186 NRGAGAAERPIELAMEPARTEAAEGMPE 213 >gi|182679602|ref|YP_001833748.1| OmpA/MotB domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182635485|gb|ACB96259.1| OmpA/MotB domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 416 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 105/263 (39%), Gaps = 3/263 (1%) Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 D Q D+ D T+ + + S + Sbjct: 153 ASDLQASDAEVENKGADVYRDPFAPLMPAPFASDETDPADVKTTGMSGVTVDHASANAAP 212 Query: 143 CKNSLTRDSEK---GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 ++ + K + + +K + K + + L + ++ Sbjct: 213 VHSASSSSVTSERLNKMNGRGGEEKKGQLQNGETSSQLSVTPKEDSKELVAELNRIKSEL 272 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +S + A + E+T G+L+++ D MF SS P +T+ +++K+ +L Sbjct: 273 NSVQKKISAAPSTPIIEVESTSEGVLLNLTDDVTYSMFAVGSSEPQKQTVQIMEKVAGIL 332 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 T + IRG+TD P+++ DNWRLS RA A +L++ G+ R+ I G+A Sbjct: 333 KSHTGNVIIRGYTDGRPYKDGVYDNWRLSTSRALMAQYMLIRGGLDPKRVEHIEGYADRH 392 Query: 320 LKIASDPMNSANRRIDILVEDRQ 342 LK + DP S NRRI+ILV + Sbjct: 393 LKNSEDPNASVNRRIEILVRKEK 415 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 6/193 (3%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + +++ +IIK++V + ++ G+WKI +ADFMT LMA FLV+W+IN+ ++ TK +I +Y Sbjct: 3 ENHNEIVIIKRRV-SHEGGHHGGAWKIAFADFMTALMALFLVLWLINSANEKTKTSIARY 61 Query: 69 FNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 FNP ++ KG + ++ + K S + KN + +L Sbjct: 62 FNPIKLVDMTPMQKGFRNPSEKEVKAGEAKTKSSTEAEKEKNEGSSPDKPDTAQLPQSKL 121 Query: 128 ----ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 E+ +F + +E +L + +++D E + Y P Sbjct: 122 AKYSEDVLFRDPYAVLAEIADKTLNPPLKAPASDLQASDAEVENKGADVYRDPFAPLMPA 181 Query: 184 LAMKRKKRLQDLA 196 + D+ Sbjct: 182 PFASDETDPADVK 194 >gi|325290746|ref|YP_004266927.1| OmpA/MotB domain protein [Syntrophobotulus glycolicus DSM 8271] gi|324966147|gb|ADY56926.1| OmpA/MotB domain protein [Syntrophobotulus glycolicus DSM 8271] Length = 273 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 106/327 (32%), Gaps = 74/327 (22%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + P N W I Y+D +T L+ F V + + + A Sbjct: 3 RKKHSEAPENHERWLITYSDLIT-LLMIFFV--------------VMYSMSKVDNDKFRA 47 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + + S + + + Q + S+ Q Sbjct: 48 MADALNMTLGGSPGRISIAQTSGGDSLIETGGP----------QNNPQSASTDPESSGQL 97 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 ++ ++ ++ D+ D N E+ + + Sbjct: 98 QKNNSGNVDMETMTILDIKAKLDQFSKANGIESKLISSTEER------------------ 139 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 G+++SI D +F S+ P + +LQKI VL Sbjct: 140 -----------------------GLVVSIQDTL---LFQPGSAEISPNALDILQKISSVL 173 Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAH 317 A S I + GHT P NW LS+ RA + +L +SG ++ R+S +G+ Sbjct: 174 AASQNYIKVEGHTCTLPIHTSQYRSNWELSVIRATNVVHILAESGQINSKRLSA-TGYGE 232 Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342 R ++D NRR+D+++ + Sbjct: 233 FRPIASNDTDEGRIKNRRVDLIILRSK 259 >gi|254473486|ref|ZP_05086883.1| OmpA/MotB domain protein [Pseudovibrio sp. JE062] gi|211957602|gb|EEA92805.1| OmpA/MotB domain protein [Pseudovibrio sp. JE062] Length = 573 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 112/283 (39%), Gaps = 3/283 (1%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 +A + + E ++ +Q + D + ++ + V ++ Sbjct: 290 EASAESSVIVIGDAPDGEGEKLAEGEILKQLAQTQADEAGEDAVMTRLVFAEVKKGEAAA 349 Query: 123 QYQRLENNIFYLSNSQQ---SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + + + + TD E Sbjct: 350 KVDEKDVPELVEETEEALKIEIVEAEPTPAEPVSEPIEVAQTDPETLPMVPAAKPTEAAQ 409 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + + L +S + L + F +R G+LI I+D + MF Sbjct: 410 GAESGDDEDDEGDKQLVSIANSVGAALDGLKTGASIEFTHSRDGVLIRIMDNDDFGMFAV 469 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 SS P P+ + ++KI +VL I IRGHTDA PF++ DNWRLS RA+ AY +L Sbjct: 470 GSSEPHPDVVKAMEKIAKVLEEENGEIVIRGHTDARPFKSKRNDNWRLSTARAHMAYFML 529 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ G+ E+RI I G+A RLK +P NRRI+I++ Q Sbjct: 530 VRGGLDENRIVGIEGYADRRLKDVEEPYAPQNRRIEIMLMKGQ 572 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 4/141 (2%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 + II++++ + T G WKI YADF T +MAFFL+MW++NA+D+ +++ I YFNP Sbjct: 6 QELIIVRRRNSDMITTPKSGVWKIAYADFATAMMAFFLLMWLVNASDEASQRGIASYFNP 65 Query: 72 FG-KNLMTASKGIFDEQNPPERSSQNKI---DLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 + + KGI D + P + ++ I T+ G ++ + Sbjct: 66 IKLVDSTASPKGIRDPEETPSPTDSDEGVDNGKPIGAGGTEKQGPTSGGGADKAEPISDR 125 Query: 128 ENNIFYLSNSQQSEHCKNSLT 148 + +E T Sbjct: 126 DTGENSTFAGANAEDGGVKAT 146 >gi|78043824|ref|YP_359811.1| flagellar motor protein MotB [Carboxydothermus hydrogenoformans Z-2901] gi|77995939|gb|ABB14838.1| flagellar motor protein MotB [Carboxydothermus hydrogenoformans Z-2901] Length = 266 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 78/209 (37%), Gaps = 8/209 (3%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +E +L + + + N + + K K +LA Sbjct: 47 ALAESLSKALGGGGIVLTNAGPDVVTGSNATVQGNLGKASQEQLPAVDEKDLKETANLAL 106 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + S + A + V G++IS D +F S+ P+ ++++IGE Sbjct: 107 IKAKVDSYIKAKGLNASVTATLEERGVVISFKDA---ILFKLGSAELTPQAKAIVRQIGE 163 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315 +L I I GHTD P NW LS RA S L+ R+S + G+ Sbjct: 164 ILLPLPNYIRIEGHTDNLPINTSRFPSNWELSTARATSVVHELIDGLHFPPYRLSAV-GY 222 Query: 316 AHHRLKIASDPM--NSANRRIDILVEDRQ 342 +R K+ + NRR+DI++ + Sbjct: 223 GEYRPKVPNTSEQNRQKNRRVDIVILRSK 251 >gi|222149694|ref|YP_002550651.1| hypothetical protein Avi_3670 [Agrobacterium vitis S4] gi|221736676|gb|ACM37639.1| flagellar motor protein [Agrobacterium vitis S4] Length = 343 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 105/340 (30%), Gaps = 18/340 (5%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLM---AFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + D + + + + +M F+V + + + K + N Sbjct: 5 RNRKRDRGADYWPGFVDALSTLLIAIMFLLTVFVVAQFVLSREISGKDEVLNRLNNQIAE 64 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 L + E + N ++ + + + +++ Sbjct: 65 LTQMLALEKGGKQDLEDALANLQSSLDTSEKERSRLQSLLDTGAGNSAQAQVKIGELSGK 124 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 +Q + ++++ + + ++ + + +RL Sbjct: 125 LDEQQQVSARAMSQIDLLNQQIAALRAQIAAVEQALQASEAKDQNSQAKIADLGRRLNVA 184 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + L+ +D + + R I I ++ +F + P+ + Sbjct: 185 LAQKVQELNRYRSDFFGRLREILSDRQNIRIVGDRFVFQSEVLFPSGGADMNPQGQEEMV 244 Query: 254 KIGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSG 303 K+ L V+ + GHTD DNW LS RA S + L+ G Sbjct: 245 KLANALIDLAKEIPPDINWVLRVDGHTDNVQLSGNGRYPDNWALSAARAVSVVKFLISKG 304 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 V DR+ +GF + D + NRRI++ + +R Sbjct: 305 VPADRL-AAAGFGEFQPIAPGDTPEARAQNRRIELKLTER 343 >gi|118589971|ref|ZP_01547375.1| flagellar motor protein MotB [Stappia aggregata IAM 12614] gi|118437468|gb|EAV44105.1| flagellar motor protein MotB [Stappia aggregata IAM 12614] Length = 500 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 3/263 (1%) Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 G F P + +Q++ ++ K G +K + + Sbjct: 235 AGDFAYAAPFDEGTQSETGIAQQNGNAAPGKGAKKGDYMAEKAGTTSFEFVGTGTLPDNG 294 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 E + K + + +S + + + + L ++S Sbjct: 295 ETTDPVVAHVLGKSLEQSSGEVVFESETETVVGTGAGEGEGTYEEDFTESSAEVLVARLS 354 Query: 201 STLSGL---VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 L+ V + + G LIS+ D +N MF S+ P PE + +L++IG+ Sbjct: 355 EVLAQTEGTVLEETASQITVTREGEGALISLTDDQNFGMFAIGSAEPRPELVKLLERIGK 414 Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 ++A + I I+GHTDA PFR+ DNWRLS RA+ A +L + GV +DR +++ G+A Sbjct: 415 IVADTPGQIVIKGHTDARPFRSKTYDNWRLSSARAHMALYMLSRGGVGKDRFNRVEGYAD 474 Query: 318 HRLKIASDPMNSANRRIDILVED 340 LK+ SDP ++NRRI+I + + Sbjct: 475 KDLKVPSDPFAASNRRIEIYLLE 497 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 1/138 (0%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 ++ +I+++K + +D G WKI YADFMT LMAFFLVMW+IN TDD ++ + QYFNP Sbjct: 7 NEIVIVRRKNSWEDDQTPHGVWKIAYADFMTALMAFFLVMWLINVTDDSVRRGVAQYFNP 66 Query: 72 FGKNLM-TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 KG+ D + E + + + VD + + +LE Sbjct: 67 VKLASTAPNRKGLNDPEINGETNEAGTKLFTGKLGGSDAPVDQDENFGDGLDEGHKLEEV 126 Query: 131 IFYLSNSQQSEHCKNSLT 148 I + + T Sbjct: 127 IETPEMGGAPASGQFTQT 144 >gi|170723854|ref|YP_001751542.1| flagellar motor protein MotB [Pseudomonas putida W619] gi|169761857|gb|ACA75173.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 339 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 115/334 (34%), Gaps = 62/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI +ADF Sbjct: 2 ENNQPIIIKRVKRYG-GGHHGGAWKIAFADF-------------------------ATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S +++ ++ I S Sbjct: 36 MAFFLVLWLLSTATPEQKIAIAGYFKDPIGFSESGTP----------------------Y 73 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 I + Q + + SE D D ++ E L + Sbjct: 74 VIDLGGSPQLAPEKTINPEEKSEPTPDTSIQLDKDQVETMAEQVERERLELLLQELQNKV 133 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + L K L + D + I I+D N PMFD S+ P Sbjct: 134 EENPQLQKFKDQILFEITQDG-------------LRIQIMDAENRPMFDIGSARLQPYFE 180 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + IS+ GHTDA P+ NW LS +RA +A + L+ G +D+ Sbjct: 181 DILLAMADTIKAVPNKISVSGHTDAKPYSGSSEFGNWELSANRANAARRALVAGGYPDDQ 240 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ G+A L DP N NRRIDI+V ++ Sbjct: 241 VARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKK 274 >gi|91776302|ref|YP_546058.1| OmpA/MotB [Methylobacillus flagellatus KT] gi|91710289|gb|ABE50217.1| OmpA/MotB [Methylobacillus flagellatus KT] Length = 267 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 7/214 (3%) Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 L+++ S N+ S D + D + + L ++ ++ Sbjct: 44 QKYKELTSALGSAFSGNTNDNTSSPSPDTPPAADRHVLKTTPTSSLIHALPLSRLQKERQ 103 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +K + ++ I++ L + T G+ I I D +F S+ E Sbjct: 104 RKEQESISAMIATLNRALGNLATNGKISISKTSLGVRIDIAD---GVLFQAGSAAIKAEA 160 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSED 307 + +I ++LA I + GHTD P N NW LS RA S + ++++G+ Sbjct: 161 DAPISEITQILADQQYAIQVEGHTDNVPISNAQFPSNWELSSMRATSVVRKMIENGIDAA 220 Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 R+S + G++ + + + NRR+ I+V Sbjct: 221 RLSAV-GYSDTQPIADNQTAEGRAQNRRVSIMVL 253 >gi|163758837|ref|ZP_02165924.1| hypothetical protein HPDFL43_15477 [Hoeflea phototrophica DFL-43] gi|162284127|gb|EDQ34411.1| hypothetical protein HPDFL43_15477 [Hoeflea phototrophica DFL-43] Length = 343 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 109/344 (31%), Gaps = 26/344 (7%) Query: 19 KKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNP 71 + + + + D T+L+A F++ + + + + N Sbjct: 5 RNRRRERGVDYWPG----FVDALSTLLLAIMFLLTVFVLAQFFLSREISGRDQVLNRLNS 60 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 L + E + N + ++ + + S + + Sbjct: 61 QINELTQLLALERSGKQDLEDTLANLQASLSESETDRSRLQQLLDSGSGATAAAEAQIGA 120 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + + + +L + + + ++ + + +R Sbjct: 121 LSETLDAEKKVSQRALNQVELLNQQISALRSQLAALEDALEVSETKDQETQAKIADLGRR 180 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETI 249 L + L+ +D + ++R + + ++ +F + P Sbjct: 181 LNVALAQRVQELNRYRSDFFGRLREILSSREDVRVVGDRFVFQSEVLFPSGGNELNPAGQ 240 Query: 250 VVLQKIGEVLAH--------STEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVL 299 + K+ E + V+ + GHTD P DNW LS RA S + L Sbjct: 241 EQMAKLAEAINELSREIPEEINWVLRVDGHTDNVPLSGTGRYADNWELSTARATSVVKYL 300 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 +++GV +R+ GF + D + NRRI++ + +R Sbjct: 301 IENGVPANRLVAA-GFGEFQPIADGDSDEARATNRRIELKLTER 343 >gi|167038133|ref|YP_001665711.1| OmpA/MotB domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039156|ref|YP_001662141.1| OmpA/MotB domain-containing protein [Thermoanaerobacter sp. X514] gi|256750878|ref|ZP_05491762.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300913254|ref|ZP_07130571.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X561] gi|307723732|ref|YP_003903483.1| OmpA/MotB domain-containing protein [Thermoanaerobacter sp. X513] gi|320116543|ref|YP_004186702.1| OmpA/MotB domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166853396|gb|ABY91805.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X514] gi|166856967|gb|ABY95375.1| OmpA/MotB domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256750213|gb|EEU63233.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300889939|gb|EFK85084.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X561] gi|307580793|gb|ADN54192.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X513] gi|319929634|gb|ADV80319.1| OmpA/MotB domain protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 238 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 9/149 (6%) Query: 199 ISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I L G + +N + V G++IS+ D +FD S+ PE VL KIG+ Sbjct: 85 IEKQLKGFIKENNLQGAVTSYIDERGLVISLQDSL---LFDLGSADVRPEEKEVLIKIGD 141 Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315 +L I + G TD P N NW LS+ RA + ++L+ G+ RIS + G+ Sbjct: 142 MLKSLPNHIRVEGFTDDLPIHNNKFDSNWELSVIRATNVVKILVNEVGIEPARISAV-GY 200 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +R + ++ + NRR+DI++ + + Sbjct: 201 GEYRPVVPNNSEENRRLNRRVDIVIMNTE 229 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 55/152 (36%), Gaps = 4/152 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K++ D++ N W + Y+D M++L+ FF+V++ I+ + I + T Sbjct: 2 KRLEEDESKPNHDRWVLTYSDMMSLLLVFFIVLYSISTVNATKFAQIASSLSKTF----T 57 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + + + N N D S I K + Q ++ +S Sbjct: 58 GTDYVLFQYNGSSFMDGNSGDKSSLGEIEKQLKGFIKENNLQGAVTSYIDERGLVISLQD 117 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 S E+ + L K D+ KS+ Sbjct: 118 SLLFDLGSADVRPEEKEVLIKIGDMLKSLPNH 149 >gi|297618036|ref|YP_003703195.1| OmpA/MotB domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297145873|gb|ADI02630.1| OmpA/MotB domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 258 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 10/158 (6%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + L+ + K+++ + + + ++ G++IS+ D +F K S + P Sbjct: 96 QGNLEAIEKQLAEYIKSE--EGLAGNIVLMEQERGLVISLKDTL---LFPKGSDVLTPRA 150 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSE 306 +++K+GE L + + GHTD P NW LS+ RA + VL G+ Sbjct: 151 HEIIRKVGESLKTIPNYVRVEGHTDDLPINTPKFPSNWELSVLRATNVVHVLAGEVGIPP 210 Query: 307 DRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 DR+S +G+ +R + +D P + NRR+DI++ ++ Sbjct: 211 DRLSA-TGYGEYRPLMPNDSEPNRAMNRRVDIVILKQK 247 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 36/100 (36%), Gaps = 3/100 (3%) Query: 16 IIKKKVAIDDTPNNLG---SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72 + + + W + Y+D +T+LM FF+VM+ ++ D +A+ + Sbjct: 1 MARNSKKEQEGGEGGPSMERWLLTYSDLITLLMIFFVVMYTMSQVDAQKFQALANSLSMV 60 Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 + RS Q + D + +++ Sbjct: 61 LSGKSISIMETPGPSVVEGRSGQIIREGQGDTPTLQGNLE 100 >gi|289577780|ref|YP_003476407.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9] gi|289527493|gb|ADD01845.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9] Length = 239 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%) Query: 199 ISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I L G V +N + V G++IS+ D +FD S+ PE VL KIG Sbjct: 85 IEKQLEGFVKENNLQGMVTSYIDERGLVISLQDT---ILFDLGSADVHPEEKDVLIKIGN 141 Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGF 315 +L I + G TD P N NW LS+ RA + ++L+ ++GV +IS + G+ Sbjct: 142 MLKTLPNHIRVEGFTDDLPIHNNKFDSNWELSVIRATNVVKILVHEAGVDPKKISAV-GY 200 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +R + +D NRR+DI++ + + Sbjct: 201 GEYRPVVPNDSEEHRRLNRRVDIVIMNAE 229 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF-NPFGKNLM 77 ++ D++ N G W + Y+D M++L+ FF+V++ I+ + + FG + Sbjct: 2 RRWEEDESKLNTGRWVLTYSDMMSLLLVFFIVLYSISTLNAAKFAQLSISLSRAFGGSDY 61 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDE 104 + + D +N + + Sbjct: 62 VIGQYMGDSFVQGNSGDKNSLGEIEKQ 88 >gi|238563173|ref|ZP_04610426.1| flagellar motor protein [Burkholderia mallei GB8 horse 4] gi|251767164|ref|ZP_04819981.1| putative chemotaxis MotB protein [Burkholderia mallei PRL-20] gi|238521179|gb|EEP84632.1| flagellar motor protein [Burkholderia mallei GB8 horse 4] gi|243063600|gb|EES45786.1| putative chemotaxis MotB protein [Burkholderia mallei PRL-20] Length = 260 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 3/197 (1%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLV 207 R S + + ++ + L + + RL DL K+ + + Sbjct: 13 RASMPARPAAPTARRTWPSASRKSEDDALAQAQGSLERREQVRLHDLQVKLMAAIEANPT 72 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + + ++T G+ I I+D + PMF SS P +L++IG+ L I Sbjct: 73 LRQFKQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDVPNRII 132 Query: 268 IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 ++GHTDA P+ NW LS DRA ++ + L+ G+ E ++ ++ G A + +D Sbjct: 133 VQGHTDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQNLNKAD 192 Query: 326 PMNSANRRIDILVEDRQ 342 P++ NRRI I+V +R+ Sbjct: 193 PLDPENRRISIIVLNRK 209 >gi|222054510|ref|YP_002536872.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] gi|221563799|gb|ACM19771.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] Length = 287 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 104/270 (38%), Gaps = 13/270 (4%) Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 +G + ++ S + ++ ++ + + S+ K N + Sbjct: 24 GEGKYLKKVEEAESLNKSLTSLQQQYDALSAENEILKSSVSKLTKDLAAANKDKEKLAAD 83 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 ++ L S+ + + + EN L A + +Q +K Sbjct: 84 NKELDKVLKAKSDTLSKNISELRQKVTDLETENARLKDEIANLKKAKEE--EVQKTSKTY 141 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L + ++ V + + ++++D +FD + PE ++VLQK+ ++L Sbjct: 142 EDLLEKMKSEISQGQVTISELKGKLTVNMVDA---VLFDSGKAEIKPEGLIVLQKVIDIL 198 Query: 260 AHSTEV-ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + + I I GHTD + NW LS RA + + L + G+ +S I+ Sbjct: 199 KNIKDKSIRIEGHTDNDQIGGALAKKYQTNWELSAARAINVTRYLQQQGIDPLNLSAIA- 257 Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDRQ 342 + + A+D + NRRI+I++ ++ Sbjct: 258 YGEFKPVAANDSREGKAKNRRIEIILVPKE 287 >gi|258513971|ref|YP_003190193.1| OmpA/MotB domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257777676|gb|ACV61570.1| OmpA/MotB domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 275 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 8/184 (4%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 E + + I + +K + L + + N+ +L Sbjct: 60 SEHILPGAGPSAIESNPSPPIQVQQIQKEAEQLKELQKELHDLIEKKNLTGHILVSIEER 119 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-A 281 G+++S +D +F S+ P+ ++Q++G++L S I I GHTD P Sbjct: 120 GLVVSFLD---PVLFPLGSAQLTPKAKNIVQEVGQILLKSDNYIRIEGHTDDIPINTAIY 176 Query: 282 RDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 NW LS RA S Q L+K+ +R+ +G+ +R ++ +D M+ NRR+DI+V Sbjct: 177 PSNWELSAARATSVVQELIKTMSFPPERL-AATGYGEYRPRVPNDSMDHKQMNRRVDIVV 235 Query: 339 EDRQ 342 + Sbjct: 236 VRSK 239 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 2/97 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF--GKNL 76 +K N W I Y+D +T+LM FF++M+ ++ + A+ + G Sbjct: 3 RKRKGKAEKENGERWLITYSDLITLLMIFFIIMFAMSEISNQKFVAMASSLSIALGGSEH 62 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + G ++ P Q + E + + +L Sbjct: 63 ILPGAGPSAIESNPSPPIQVQQIQKEAEQLKELQKEL 99 >gi|121600109|ref|YP_994715.1| flagellar motor protein [Burkholderia mallei SAVP1] gi|124386114|ref|YP_001027662.1| putative chemotaxis MotB protein [Burkholderia mallei NCTC 10229] gi|121228919|gb|ABM51437.1| flagellar motor protein [Burkholderia mallei SAVP1] Length = 245 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 3/193 (1%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNI 211 + + ++ + L + + RL DL K+ + + Sbjct: 2 PARPAAPTARRTWPSASRKSEDDALAQAQGSLERREQVRLHDLQVKLMAAIEANPTLRQF 61 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 + + ++T G+ I I+D + PMF SS P +L++IG+ L I ++GH Sbjct: 62 KQQIRIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDVPNRIIVQGH 121 Query: 272 TDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 TDA P+ NW LS DRA ++ + L+ G+ E ++ ++ G A + +DP++ Sbjct: 122 TDAVPYAGGEKGYSNWELSADRANASRRELIAGGMDEAKVLRVLGLASTQNLNKADPLDP 181 Query: 330 ANRRIDILVEDRQ 342 NRRI I+V +R+ Sbjct: 182 ENRRISIIVLNRK 194 >gi|297544067|ref|YP_003676369.1| OmpA/MotB domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841842|gb|ADH60358.1| OmpA/MotB domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 239 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%) Query: 199 ISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I L G V +N + V G++IS+ D +FD S+ PE VL KIG Sbjct: 85 IEKQLEGFVKENNLQGMVTSYIDERGLVISLQDTL---LFDLGSADVHPEEKDVLIKIGN 141 Query: 258 VLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGF 315 +L I + G TD P N NW LS+ RA + ++L+ ++GV +IS + G+ Sbjct: 142 MLKTLPNHIRVEGFTDDLPIHNNKFDSNWELSVIRATNVVKILVHEAGVDPKKISAV-GY 200 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +R + +D NRR+DI++ + + Sbjct: 201 GEYRPVVPNDSEEHRRLNRRVDIVIMNAE 229 Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF-NPFGKNLM 77 ++ D++ N G W + Y+D M++L+ FF+V++ I+ + + FG + Sbjct: 2 RRWEEDESKLNTGRWVLTYSDMMSLLLVFFIVLYSISTLNAAKFAQLSVSLSRAFGGSDY 61 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDE 104 + + D +N + + Sbjct: 62 VIGQYMGDSFVQGNSGDKNSLGEIEKQ 88 >gi|323158625|gb|EFZ44639.1| chemotaxis protein motB [Escherichia coli E128010] Length = 275 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 105/304 (34%), Gaps = 71/304 (23%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 MT +MAFFLVMW+I+ + I +YF +T I + ++P + Sbjct: 1 MTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQS 60 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + N +LK Sbjct: 61 QGEVNKQPNIEELK---------------------------------------------- 74 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + E L L + ++ +L+ L + L V + + ++ Sbjct: 75 -------KRMEQSRLRKLRGDLDQLIESDPKLRALRPHLKIDL---VQEGLRIQIIDSQN 124 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280 R F S+ P +L+ I VL IS+ GHTD P+ + Sbjct: 125 RPM-------------FRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASG 171 Query: 281 A--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 NW LS DRA ++ + LM G+ ++ ++ G A P ++ NRRI +LV Sbjct: 172 EKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLV 231 Query: 339 EDRQ 342 ++Q Sbjct: 232 LNKQ 235 >gi|169831941|ref|YP_001717923.1| OmpA/MotB domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169638785|gb|ACA60291.1| OmpA/MotB domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 257 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 69/183 (37%), Gaps = 8/183 (4%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + + P + + L +A + + + T Sbjct: 69 EAPDASLGPDERFPMELDKGFVKSSDTAFLAQMAPVQKQVQELMEEAGLTAHIEMTTEER 128 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR 282 G++ISI D +F S+ P ++ K+G +L + I I GHTD P Sbjct: 129 GLVISIQDT---VLFATGSADLTPTAREIMDKLGLILLQTPNYIRIEGHTDNVPINTPRF 185 Query: 283 -DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 NW LS R+ S + L+ + +R+S +G+ +R + +D NRR+D +V Sbjct: 186 PSNWELSAARSTSVVRYLIARHNFPPERLSA-TGYGEYRPRDTNDTAQGRQRNRRVDFVV 244 Query: 339 EDR 341 Sbjct: 245 LSS 247 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 3/143 (2%) Query: 31 GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90 W + YADF+TVL+ FF+V++ ++ D A+ + + L + + + Sbjct: 18 ERWVLPYADFVTVLLCFFIVLYSLSTIDAHKFAALARSLH---HALGGQGSVLIEAPDAS 74 Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 + + + +KQ Q L ++ + + + + Sbjct: 75 LGPDERFPMELDKGFVKSSDTAFLAQMAPVQKQVQELMEEAGLTAHIEMTTEERGLVISI 134 Query: 151 SEKGKDLCKSTDLEKSINKEENY 173 + S DL + + + Sbjct: 135 QDTVLFATGSADLTPTAREIMDK 157 >gi|323165315|gb|EFZ51103.1| chemotaxis protein motB [Shigella sonnei 53G] Length = 275 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 63/304 (20%), Positives = 105/304 (34%), Gaps = 71/304 (23%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 MT +MAFFLVMW+I+ + I +YF +T I + ++P + Sbjct: 1 MTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQS 60 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + N DLK Sbjct: 61 QGEVNKQPNIEDLK---------------------------------------------- 74 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + E L L + ++ +L+ L + L V + + ++ Sbjct: 75 -------KRMEQSRLRKLRGDLDQLIESDPKLRALRPHLKIDL---VQEGLRIQIIDSQN 124 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280 R F S+ P +L+ I VL IS+ GHTD P+ + Sbjct: 125 RPM-------------FRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASG 171 Query: 281 A--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 NW LS DRA ++ + LM G+ ++ ++ G A P ++ NRRI +LV Sbjct: 172 EKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLV 231 Query: 339 EDRQ 342 ++Q Sbjct: 232 LNKQ 235 >gi|306820125|ref|ZP_07453773.1| chemotaxis protein MotB [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551903|gb|EFM39846.1| chemotaxis protein MotB [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 250 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 11/160 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + K L + + K + G+++ D +FD+ S+ P++ Sbjct: 86 AESNNFEKMEKQIKEYLEENKLEKQISISNEEEGLVLRFQDS---SLFDQGSATLKPQSY 142 Query: 250 VVLQKIGEVLAHSTE---VISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMK-SGV 304 VL+ +G +L +S+ GHTD P + NW LS +RA + + L++ G+ Sbjct: 143 NVLKYVGGILKSKNFKDKFVSVEGHTDNVPISTSTHQSNWELSSNRASNVVRYLIENQGI 202 Query: 305 SEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 R+S G+ + +D + NRR+DI++ + Sbjct: 203 DPKRLSTA-GYGEYHPVAPNDTPANMAKNRRVDIMILRTK 241 Score = 36.5 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 2/88 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + + Y D MT+L+ FF++++ ++ D +AI F L Sbjct: 3 KKNITYEIKMGAPEYMNTYGDMMTLLLCFFVLLFAMSNIDAKKFEAIVMSFQGSLGVLDG 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHI 106 + +N E+ S + S Sbjct: 63 GNT--LSSENKIEKGSVFEGQSSSVAES 88 >gi|313650105|gb|EFS14518.1| chemotaxis protein motB [Shigella flexneri 2a str. 2457T] gi|332756040|gb|EGJ86393.1| chemotaxis protein motB [Shigella flexneri 4343-70] gi|333017760|gb|EGK37067.1| chemotaxis protein motB [Shigella flexneri K-227] Length = 275 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 105/304 (34%), Gaps = 71/304 (23%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 MT +MAFFLVMW+I+ + I +YF +T I + ++P + Sbjct: 1 MTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQS 60 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + N +LK Sbjct: 61 QGEVNKQPNIEELK---------------------------------------------- 74 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + E L L + ++ +L+ L + L V + + ++ Sbjct: 75 -------KRMEQSRLRKLRGDLDQLIESDPKLRALRLHLKIDL---VQEGLRIQIIDSQN 124 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280 R F S+ P +L+ I VL IS+ GHTD P+ + Sbjct: 125 RPM-------------FRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASG 171 Query: 281 A--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 NW LS DRA ++ + LM G+ ++ ++ G A P ++ NRRI +LV Sbjct: 172 EKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLV 231 Query: 339 EDRQ 342 ++Q Sbjct: 232 LNKQ 235 >gi|222087026|ref|YP_002545561.1| OmpA family protein [Agrobacterium radiobacter K84] gi|221724474|gb|ACM27630.1| OmpA family protein [Agrobacterium radiobacter K84] Length = 321 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 105/322 (32%), Gaps = 21/322 (6%) Query: 40 FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 T+LMA F++ I + + + N +L+ + + E S Sbjct: 1 MSTLLMAIMFLLTVFVLGQFILSREITGRDEALNRLNSRINDLVEQLALEKNGKQDLEDS 60 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 N ++ + + + + Q + + +Q + +L++ Sbjct: 61 VANLQASLSMAENERSRLQALLTAGSGNGQAAQQQVGTLTQELDEQKQASARALSQVELL 120 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 + + ++ ++ +RL + L+ +D + Sbjct: 121 NQQIAALRSQIAAVEAALQASESKDQSSQVKIADLGRRLNVALAQRVQELNRYRSDFFGR 180 Query: 214 GVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHST 263 + R I I ++ +F ++ P + K+ L Sbjct: 181 LREILSDRDNIRIVGDRFVFQSEVLFPSGAADLNPAGQTEMAKLAAALIDLSKEIPPEIN 240 Query: 264 EVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 V+ + GHTD P DNW LS RA + + L+ GV DR+ GF + Sbjct: 241 WVLRVDGHTDNVPLSGNGRYPDNWALSSARAIAVVKFLIAQGVPADRLVAA-GFGEFQPI 299 Query: 322 IASDPMNSA--NRRIDILVEDR 341 D + NRRI++ + ++ Sbjct: 300 APGDTPEARATNRRIELKLTEK 321 >gi|118581755|ref|YP_903005.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM 2379] gi|118504465|gb|ABL00948.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379] Length = 266 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 87/226 (38%), Gaps = 11/226 (4%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 +R + + ++ ++E + + + + K+ L +++N + + Sbjct: 44 DLKRGQEQLTAENSGLKTELADQARQKQALEQLLASKTDTLSQNVNDLRQKIAALEDENR 103 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 L R+++ L L L ++ V+ + + +++ +FD Sbjct: 104 ELRKAREEKTSQLGTTYEKLLQNLKSEIAQGQVVISELKGALTVTM---EAAILFDSGRV 160 Query: 243 IPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQ 297 PE ++L K+ E L + + I + GHTD NW LS RA + + Sbjct: 161 DVKPEGQLILFKLVETLKANRDRAIRVEGHTDNLAPSGALSRLFPSNWELSGARAVNVAR 220 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 L + GV +S ++ +R + + NRRI+I + R Sbjct: 221 YLQRQGVDPSLLSAVA-CGEYRPVADNATREGRARNRRIEITLVAR 265 >gi|146284108|ref|YP_001174261.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501] gi|145572313|gb|ABP81419.1| chemotaxis protein MotB [Pseudomonas stutzeri A1501] Length = 336 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 1/226 (0%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 ++ + ++L + F + + ++ + E + E Sbjct: 46 SSATPEQKKLISGYFQDPIGFTESASPHVIDLGGTPTPSPDRTLNPELEPAQSEAQIDAQ 105 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 ++ ++R++ L + + +LFE T+ G+ I I+D N PMF Sbjct: 106 QAETFAEQIERERLELLLQELQNKVDENPELQKFKDQILFEITQDGLRIQIMDAENRPMF 165 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAY 296 S+ P +L + E +A ISI GHTDA PF NW LS RA +A Sbjct: 166 ALGSAQLQPYFEDILLALVETIAAVPNKISISGHTDAKPFSGRGDFGNWELSASRANAAR 225 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + L+ G E++I+++ G+A L DP N NRRIDILV ++ Sbjct: 226 RTLVYGGYPEEQIARVVGYASSALFDRKDPFNPVNRRIDILVLTKK 271 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 76/173 (43%), Gaps = 1/173 (0%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 +N Q II+K+ + ++ G+WKI +ADF T +MAFFLVMW++++ + KK I YF Sbjct: 2 DNTQPIIVKRVKKVA-GGHHGGAWKIAFADFATAMMAFFLVMWLMSSATPEQKKLISGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +AS + D P S ++ ++ ++ +D + T ++ + Sbjct: 61 QDPIGFTESASPHVIDLGGTPTPSPDRTLNPELEPAQSEAQIDAQQAETFAEQIERERLE 120 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + ++ E+ + +D + ++ + F ++ + Sbjct: 121 LLLQELQNKVDENPELQKFKDQILFEITQDGLRIQIMDAENRPMFALGSAQLQ 173 >gi|195953009|ref|YP_002121299.1| OmpA/MotB domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195932621|gb|ACG57321.1| OmpA/MotB domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 271 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 77/204 (37%), Gaps = 7/204 (3%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 ++ + + + E+ L + + ++ ++ Q + ++ Sbjct: 35 AIMRGSKAIPIYAEAFAKAMGMRILPFEQTLPSQILPQPALPKIQLTQKGQYINMQLKRI 94 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L + + GI + + D +F S+ P+ +L I ++++ Sbjct: 95 EQMLKKQGLEGKFKVKLVPQGIKLILQDT---VLFKSGSADIDPKYYSLLDSIYKIISSL 151 Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I I G TD +P NW LS DRA S + + G +I I+G+ + Sbjct: 152 PNPIEIDGFTDNTPIHTLTFPSNWELSTDRAASVAKYFIFKGFDPSKIK-IAGYGKYHPL 210 Query: 322 IASDP--MNSANRRIDILVEDRQG 343 + + + NRR++I + + +G Sbjct: 211 VPNTTPQNKAMNRRVEITILNIKG 234 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 17/34 (50%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWII 54 W I YADF+T+L+A F+ ++ I Sbjct: 3 KKHKCPEEASERWAIPYADFLTLLLALFISLYAI 36 >gi|14331084|emb|CAC40971.1| hypothetical protein [Vibrio pommerensis] Length = 378 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 65/162 (40%), Gaps = 9/162 (5%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 AM ++ + + + S ++ T T ++ +F+ Sbjct: 208 GGAAQTAMSEPMDVRPVDEVVMSEPEPVMETVAEPEPQVIETYTQVV---SSAFGEALFE 264 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ P ++ LQ + L E + I GHTD+ + N RLS RA S Sbjct: 265 TGSTSLSPSLMLQLQPLLARLKQYPETVVEISGHTDS---KGSDTLNQRLSEQRAQSVAN 321 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L+ GV +RI+++ G+ ++D + NRR++I+ Sbjct: 322 YLISKGVDPERITRVVGYGESLPVASNDTESGRAQNRRVEIV 363 >gi|149377734|ref|ZP_01895468.1| Flagellar motor protein [Marinobacter algicola DG893] gi|149357960|gb|EDM46448.1| Flagellar motor protein [Marinobacter algicola DG893] Length = 319 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 7/228 (3%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 + + R F N + + S D+E+S + E+ + Sbjct: 44 TATASPEQIRAVEGYFKDPVGFTEGGSPNPVDLEGSASVINESSEDIERSDIQIEDQVVE 103 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTP 235 L++ ++++++L + + + +L + T G+ I I+D+ P Sbjct: 104 ELAQTL-----EQQQMEELFQDLKERIEQNETLQEFKDQLLIDITSEGLRIQIVDRSQRP 158 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYS 294 MFD + + +L ++ + L +SI GHTD++PF NW LS DRA + Sbjct: 159 MFDSGRAELKYYSQDILFELAKTLGTVNNKLSITGHTDSTPFSGRPGYTNWELSADRANT 218 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 A + L+ GV +++I ++ G + L DP NRRI I+V +++ Sbjct: 219 ARRALVAGGVRQNQIGRVVGLSDSVLFDQDDPQAPVNRRISIIVMNKK 266 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 1/130 (0%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 +Q II+K+K + ++ GSWK+ +ADF T +MAFFLV+W+ + +A+E YF Sbjct: 2 EEQPIIVKRKKKVA-AGHHGGSWKVAFADFATAMMAFFLVLWLTATASPEQIRAVEGYFK 60 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 S D + +++ D+ + ++ V ++ T +++Q + L + Sbjct: 61 DPVGFTEGGSPNPVDLEGSASVINESSEDIERSDIQIEDQVVEELAQTLEQQQMEELFQD 120 Query: 131 IFYLSNSQQS 140 + ++ Sbjct: 121 LKERIEQNET 130 >gi|255099860|ref|ZP_05328837.1| putative chemotaxis protein [Clostridium difficile QCD-63q42] Length = 246 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + K L + + V G++IS+ D +FD +I + Sbjct: 84 QNAKFKKIGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAIVKDNSRD 140 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308 + +IG++L + + GHTD +N NW LS+ RA + Q+L+ + G++ D+ Sbjct: 141 KIIQIGKMLNEMNSYMRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 200 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +S + G+ R + NRR+DI++ D + Sbjct: 201 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 235 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 36/83 (43%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 W + Y+D +T+LM FF++M+ ++ D + K + Q N +G + P Sbjct: 14 RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 73 Query: 92 RSSQNKIDLSIDEHITKNSVDLK 114 N +D + K +++ Sbjct: 74 EPGSNDLDTLQNAKFKKIGEEIQ 96 >gi|254974362|ref|ZP_05270834.1| putative chemotaxis protein [Clostridium difficile QCD-66c26] gi|255091756|ref|ZP_05321234.1| putative chemotaxis protein [Clostridium difficile CIP 107932] gi|255313486|ref|ZP_05355069.1| putative chemotaxis protein [Clostridium difficile QCD-76w55] gi|255516174|ref|ZP_05383850.1| putative chemotaxis protein [Clostridium difficile QCD-97b34] gi|255649270|ref|ZP_05396172.1| putative chemotaxis protein [Clostridium difficile QCD-37x79] gi|306519371|ref|ZP_07405718.1| putative chemotaxis protein [Clostridium difficile QCD-32g58] Length = 246 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + K L + + V G++IS+ D +FD ++ + Sbjct: 84 QNAKFKKVGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAVVKDNSRD 140 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308 + +IG++L + + GHTD +N NW LS+ RA + Q+L+ + G++ D+ Sbjct: 141 KIIQIGKMLNEMNSYMRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 200 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +S + G+ R + NRR+DI++ D + Sbjct: 201 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 235 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 36/83 (43%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 W + Y+D +T+LM FF++M+ ++ D + K + Q N +G + P Sbjct: 14 RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 73 Query: 92 RSSQNKIDLSIDEHITKNSVDLK 114 N +D + K +++ Sbjct: 74 EPGSNDLDSLQNAKFKKVGEEIQ 96 >gi|147678453|ref|YP_001212668.1| flagellar motor protein [Pelotomaculum thermopropionicum SI] gi|146274550|dbj|BAF60299.1| flagellar motor protein [Pelotomaculum thermopropionicum SI] Length = 255 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 78/195 (40%), Gaps = 11/195 (5%) Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 +S E + L + A L+ L +++ + + + Sbjct: 57 ASAMGGGQSVMTEPGASLAPGVSGSSLPADLGQAAAEAADLESLRRELQEYIEQ---NGL 113 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 V G+++S +D +F S+ PE + KIG++L + I + GH Sbjct: 114 TGRVSVNLEERGLVLSFLD---VALFPLGSARLTPEAQETVGKIGKILLKAPNYIRVEGH 170 Query: 272 TDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM-- 327 TD P NW LS+ RA S Q L+ K +R+S +G+ R ++ +D Sbjct: 171 TDNLPINTREFPSNWELSVARATSVVQELIHKLNFPPERLSA-TGYGEFRPRMPNDSAEH 229 Query: 328 NSANRRIDILVEDRQ 342 NRR+D+++ + Sbjct: 230 RQQNRRVDLVILRSK 244 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 2/101 (1%) Query: 16 IIKKKVAI--DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 +I+KK W + Y+D +T+LM FF+VM+ +++ + KAI Sbjct: 1 MIRKKQGQSQKSGKAGHERWLLTYSDLITLLMIFFVVMYSLSSINARKFKAIAMSLASAM 60 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 + P S DL + L+ Sbjct: 61 GGGQSVMTEPGASLAPGVSGSSLPADLGQAAAEAADLESLR 101 >gi|298207224|ref|YP_003715403.1| Thrombospondin type 3 repeat:OmpA/MotB [Croceibacter atlanticus HTCC2559] gi|83849860|gb|EAP87728.1| Thrombospondin type 3 repeat:OmpA/MotB [Croceibacter atlanticus HTCC2559] Length = 478 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 98/271 (36%), Gaps = 25/271 (9%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + + G+ + P+ S D D + + +++ + Sbjct: 229 DECPETPGLAEFNGCPDTDSDGIEDRKDDCPNVAGTAEFNGCPDTDGDGIPDPKDDCPTV 288 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + Q C ++ + +D C + S N P K+ + + + D Sbjct: 289 AGIQALNGCPDADGDGIKDSEDNCPNEAGPASNNGC-----PFEDKDGDGVLDKDDQCPD 343 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 ++G VA+N V E ++ + + T +FD + S E+ LQ Sbjct: 344 --------VAGTVANNGCPEVTVE-----VMNELNEYSRTILFDLNKSTIRSESFETLQN 390 Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 I ++++ I GHTD+ N +LS +RA S L GV+ ++++ Sbjct: 391 IADIMSEYPTAKFHIEGHTDSQ---GSEAYNEKLSRERAASVRTYLTTKGVAANKLTS-E 446 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 G+ R + NRR++I +E + Sbjct: 447 GYGELRPIATNKTAAGRQQNRRVEIKLEKDR 477 >gi|299134154|ref|ZP_07027347.1| OmpA/MotB domain protein [Afipia sp. 1NLS2] gi|298590901|gb|EFI51103.1| OmpA/MotB domain protein [Afipia sp. 1NLS2] Length = 338 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 58/342 (16%), Positives = 118/342 (34%), Gaps = 29/342 (8%) Query: 21 VAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + L W + D T+++A ++++++ + Q + K L Sbjct: 5 RSRHNGGTGLNYWPG-FVDALSTLVLA---IVFLLSVFLVVQF-YLSQEVSGKDKALERL 59 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + I N +L ++ I + L + + ++E+ Sbjct: 60 NAQIAQLTNLLSLEKVTSGNL--NDQIAQLRASLATTEAERDRAKGQIESLSGGAGGGDL 117 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 ++ + ++ ++ L+ + + ++++ DL +++ Sbjct: 118 NKQLATEKQISERALAQVEVLNQQISALRRQLAALEDALNASEQKGKESQEKIADLGQRL 177 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLPETIV 250 + L+ V + F IL D R + FD S+ LPE Sbjct: 178 NVALAQRVQELSRYRSEFFGRLRTILGDRPDIRIVGDRFVFQSEVFFDSGSAALLPEGRN 237 Query: 251 VLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 L ++ L A V+ + GHTD P + NW LS RA S Q L+ Sbjct: 238 ELDQLATALGDLEKKIPAEIPWVLRVDGHTDVRPINSPQFKSNWDLSAARAISVVQYLIS 297 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 GVS R+ GF + + NRRI++ + ++ Sbjct: 298 RGVSPQRLVAA-GFGEFQPLDTGTTEEAYKRNRRIELKLTEK 338 >gi|329894187|ref|ZP_08270142.1| Flagellar motor rotation protein MotB [gamma proteobacterium IMCC3088] gi|328923212|gb|EGG30533.1| Flagellar motor rotation protein MotB [gamma proteobacterium IMCC3088] Length = 341 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 105/340 (30%), Gaps = 44/340 (12%) Query: 45 MAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP------PERSSQNKI 98 MAFF+++ T+ K I K ++ + Sbjct: 1 MAFFVLLLSFAETEVPKFKQISGSLKAAFGIEKIVPKITVPMARSLLVEEFTPAVAERTV 60 Query: 99 DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158 ++ + ++ + T + + + + + + E + E G+ L Sbjct: 61 INRKEQQSDETRLESIVKKTEDGEYDEETQLKFQQVQDVLREEINRGMAEVKIENGEILV 120 Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG---- 214 D + K ++ ++ ++ + +I +S + D Sbjct: 121 NLLDPSSAGGKPDDSGSQKGGPIPQEVVEMTAKIAKVQAEIKEEISVNLVDRASGQSFGG 180 Query: 215 -----------VLFETTRTGILISIIDQRNTPM-------------------FDKSSSIP 244 + + + D+ + + FD S+ Sbjct: 181 TSDSTTSNSSEANANSKYQQLQADLADEIASGLAEIEKQGDKIIVRLANQGSFDSGSATL 240 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKS 302 L K+G L+ + + I GHTD P + NW LS RA + L+ S Sbjct: 241 KNSFGGTLSKLGNTLSRYSGSVLIEGHTDNVPVGFSERFKSNWDLSASRAAAVADYLLTS 300 Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 + I G+A + +D + NRRI+++V+D Sbjct: 301 TPLQGGSVMIKGYADSKPLDTNDSPVGRANNRRIEVIVDD 340 >gi|88812420|ref|ZP_01127670.1| flagellar motor protein [Nitrococcus mobilis Nb-231] gi|88790427|gb|EAR21544.1| flagellar motor protein [Nitrococcus mobilis Nb-231] Length = 312 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 108/329 (32%), Gaps = 49/329 (14%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K P W +AD T+L++FF+++ + D + K I Sbjct: 7 KSGKRRLAPVGAPPWMATFADLSTLLLSFFVLLLSFSEMDVNKYKEIAGSMRMAF----- 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + ++PP +S D S + + + + + + + + Sbjct: 62 GVQREDVTRDPPMGTSFVARDFSPGQPSQSPFAKIAPTPMSTSEGIRPMPPRVTVAPSGP 121 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 SL+R ++ Sbjct: 122 GGPDSLLSLSRQP------------------------------------SDAAVEQARSN 145 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + S + + I+I + R F S+ + + ++KIG+ Sbjct: 146 LIKLQSLFRQEIERGLIEVAQIGAQIVIRV---REHGSFPSGSAKLIKPFLPAVRKIGQA 202 Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFA 316 + + + I GHTD P N R NW LS RA S + L V +RI ++G A Sbjct: 203 IRMTEGQVIIAGHTDNVPIHNAQFRSNWDLSAARAISLLRALGAVEAVDANRI-TVAGHA 261 Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQG 343 R +++D + NRR++I++ + G Sbjct: 262 DTRPIVSNDTPRHRARNRRVEIILVNGNG 290 >gi|260682442|ref|YP_003213727.1| putative chemotaxis protein [Clostridium difficile CD196] gi|260686041|ref|YP_003217174.1| putative chemotaxis protein [Clostridium difficile R20291] gi|260208605|emb|CBA61322.1| putative chemotaxis protein [Clostridium difficile CD196] gi|260212057|emb|CBE02637.1| putative chemotaxis protein [Clostridium difficile R20291] Length = 248 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + K L + + V G++IS+ D +FD ++ + Sbjct: 86 QNAKFKKVGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAVVKDNSRD 142 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308 + +IG++L + + GHTD +N NW LS+ RA + Q+L+ + G++ D+ Sbjct: 143 KIIQIGKMLNEMNSYMRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 202 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +S + G+ R + NRR+DI++ D + Sbjct: 203 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 237 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 36/83 (43%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 W + Y+D +T+LM FF++M+ ++ D + K + Q N +G + P Sbjct: 16 RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 75 Query: 92 RSSQNKIDLSIDEHITKNSVDLK 114 N +D + K +++ Sbjct: 76 EPGSNDLDSLQNAKFKKVGEEIQ 98 >gi|149371103|ref|ZP_01890698.1| OmpA domain protein [unidentified eubacterium SCB49] gi|149355889|gb|EDM44447.1| OmpA domain protein [unidentified eubacterium SCB49] Length = 466 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 90/305 (29%), Gaps = 24/305 (7%) Query: 52 WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111 + +NA ++ G + S G+ + +R D + TK Sbjct: 170 FALNAQSAYKYAFDDE----TGTKHLQHSLGLVFKFGGSDRDGDGIYDQDDECPDTKGLA 225 Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + + E+ + S C ++ D C + + N Sbjct: 226 EFNGCPDTDGDGIEDREDACPDAAGSADMNGCPDTDGDGVADNNDNCPTVSGPSANNGCP 285 Query: 172 NYFLPPLSK-EKILAMKRKKRLQDLAKKISSTLS--------GLVADNIVKGVLFETTRT 222 +K A + + + Sbjct: 286 WPDTDGDGILDKDDACPEEAGPAANKGCPNRDKDGDGVLDKDDECPEVPGTVARKGCPEP 345 Query: 223 GILISIIDQRNT----PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277 I + I+DQ N +FD + S E+ ++ + +++ I GH+D+ Sbjct: 346 QITVEIMDQINEYSRTILFDTNKSTIRKESHAAIRSMIDIMNEYKTANFLIEGHSDS--- 402 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 A N LS RA + L GV R++ GF R K ++ NRR++ Sbjct: 403 SGSASYNLELSKKRAAAVKTFLESKGVDASRLTS-EGFGETRPKASNSTAAGRQENRRVE 461 Query: 336 ILVED 340 + + Sbjct: 462 VSLRK 466 >gi|255654793|ref|ZP_05400202.1| putative chemotaxis protein [Clostridium difficile QCD-23m63] gi|296449538|ref|ZP_06891315.1| chemotaxis protein MotB [Clostridium difficile NAP08] gi|296261602|gb|EFH08420.1| chemotaxis protein MotB [Clostridium difficile NAP08] Length = 246 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + K L + + V G++IS+ D +FD ++ + Sbjct: 84 QNAKFKKVGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAVVKDNSRE 140 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308 + +IG++L I + GHTD +N NW LS+ RA + Q+L+ + G++ D+ Sbjct: 141 KIIQIGKMLNEMNSYIRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 200 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +S + G+ R + NRR+DI++ D + Sbjct: 201 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 235 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 36/83 (43%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 W + Y+D +T+LM FF++M+ ++ D + K + Q N +G + P Sbjct: 14 RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 73 Query: 92 RSSQNKIDLSIDEHITKNSVDLK 114 N +D + K +++ Sbjct: 74 EPGSNDLDNLQNAKFKKVGEEIQ 96 >gi|255305748|ref|ZP_05349920.1| putative chemotaxis protein [Clostridium difficile ATCC 43255] Length = 246 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + K L + + V G++IS+ D +FD +I + Sbjct: 84 QNAKFKKIGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAIVKDNSRD 140 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308 + +IG++L + + GHTD +N NW LS+ RA + Q+L+ + G++ D+ Sbjct: 141 KIIQIGKMLNEMNSYMRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 200 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +S + G+ R + NRR+DI++ D + Sbjct: 201 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 235 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 37/83 (44%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 W + Y+D +T+LM FF++M+ ++ D + K + Q N +G + P Sbjct: 14 RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 73 Query: 92 RSSQNKIDLSIDEHITKNSVDLK 114 + N +D + K +++ Sbjct: 74 EAGSNDLDTLQNAKFKKIGEEIQ 96 >gi|126698325|ref|YP_001087222.1| putative chemotaxis protein [Clostridium difficile 630] gi|115249762|emb|CAJ67579.1| putative OmpA/MotB proton channel [Clostridium difficile] Length = 248 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + K L + + V G++IS+ D +FD +I + Sbjct: 86 QNAKFKKVGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAIVKDNSRD 142 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308 + +IG++L + + GHTD +N NW LS+ RA + Q+L+ + G++ D+ Sbjct: 143 KIIQIGKMLNEMNSYMRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 202 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +S + G+ R + NRR+DI++ D + Sbjct: 203 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 237 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 36/83 (43%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 W + Y+D +T+LM FF++M+ ++ D + K + Q N +G + P Sbjct: 16 RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 75 Query: 92 RSSQNKIDLSIDEHITKNSVDLK 114 N +D + K +++ Sbjct: 76 EPGSNDLDTLQNAKFKKVGEEIQ 98 >gi|313200583|ref|YP_004039241.1| ompa/motb domain-containing protein [Methylovorus sp. MP688] gi|312439899|gb|ADQ84005.1| OmpA/MotB domain protein [Methylovorus sp. MP688] Length = 313 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 7/201 (3%) Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + + + + + K+++ + + ++ Sbjct: 53 GTAFTGENTPQLNNPPDGNNEHANIKGLYGQPSFIRPLELARRNDKQRREREAMTAMANN 112 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + L + + G+ + I D +F +S P L +I + L Sbjct: 113 LANHLAPMVLEGKIKVMQNNRGVRVDIHDSL---LFAPGASELQPIASGPLNEIAQALKA 169 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + I + GHTD P N NW LS RA S ++L SG+ E R+S + GF + Sbjct: 170 NNHAIQVEGHTDNVPIHNDKFYSNWELSAMRASSVVRMLQDSGLDEKRLSAV-GFGASQP 228 Query: 321 KIASDP--MNSANRRIDILVE 339 + + NRR+ I++ Sbjct: 229 LEDNSTPLGRARNRRVSIMIL 249 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 64/215 (29%), Gaps = 4/215 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ +++ +N W + YADF+T+L AFF+VM+ I++ + + + T Sbjct: 2 RRRQVEEDEDNKERWMVSYADFITLLFAFFVVMYAISSVNQGKYEQLTSSLGTAF----T 57 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 P + I + ++L + Q+++ + + L+N Sbjct: 58 GENTPQLNNPPDGNNEHANIKGLYGQPSFIRPLELARRNDKQRREREAMTAMANNLANHL 117 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + + D +A K + + Sbjct: 118 APMVLEGKIKVMQNNRGVRVDIHDSLLFAPGASELQPIASGPLNEIAQALKANNHAIQVE 177 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + + D R ++ ++ Sbjct: 178 GHTDNVPIHNDKFYSNWELSAMRASSVVRMLQDSG 212 >gi|296878139|ref|ZP_06902154.1| chemotaxis protein MotB [Clostridium difficile NAP07] gi|296430892|gb|EFH16724.1| chemotaxis protein MotB [Clostridium difficile NAP07] Length = 248 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + K L + + V G++IS+ D +FD ++ + Sbjct: 86 QNAKFKKVGEEIQKYLNENGMANSVSLRVQDRGLVISLKDT---ILFDTGKAVVKDNSRE 142 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDR 308 + +IG++L I + GHTD +N NW LS+ RA + Q+L+ + G++ D+ Sbjct: 143 KIIQIGKMLNEMNSYIRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDK 202 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +S + G+ R + NRR+DI++ D + Sbjct: 203 LSAV-GYGEFRPIAENSSEEGRSKNRRVDIVLVDSK 237 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 36/83 (43%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 W + Y+D +T+LM FF++M+ ++ D + K + Q N +G + P Sbjct: 16 RWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSKIEPVV 75 Query: 92 RSSQNKIDLSIDEHITKNSVDLK 114 N +D + K +++ Sbjct: 76 EPGSNDLDNLQNAKFKKVGEEIQ 98 >gi|82940569|emb|CAJ44300.1| putative Chemotaxis Motility protein B (MotB) [Rhizobium leguminosarum bv. viciae] Length = 146 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 62/137 (45%), Positives = 92/137 (67%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 VA + +G+ + G+L+SI DQ + MF+ S++P E ++ ++KIG +L I Sbjct: 10 VAGKLAEGLTVTASEGGLLVSISDQTDDSMFNIGSAVPRQEMVLAMEKIGAILKARGGAI 69 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 +IRGHTD ++ +NWRLS+DRA SAY +L++ G+ E RIS++SGFA RLK+ SDP Sbjct: 70 AIRGHTDGRQYKGTQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPSDP 129 Query: 327 MNSANRRIDILVEDRQG 343 N+ NRRI+ILV+ QG Sbjct: 130 FNATNRRIEILVQADQG 146 >gi|225181601|ref|ZP_03735042.1| OmpA/MotB domain protein [Dethiobacter alkaliphilus AHT 1] gi|225167709|gb|EEG76519.1| OmpA/MotB domain protein [Dethiobacter alkaliphilus AHT 1] Length = 227 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 8/195 (4%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 D K + + S + S+ +++ + + +D+ S L + Sbjct: 25 DVIKFQQIMSSIQVSFLGQDGIMESSLDPSRGEMIELAVDHKFEDVLMTYLEVKSHLQEE 84 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 + + G+++ I D+ +FD + PE +L K+ +LA+ I + Sbjct: 85 GLANIIDVRIEDRGVVLEIQDRL---LFDTGRAEIRPEARELLVKVAGILANVPNQIIVE 141 Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDP- 326 GHTD P + NW LS+DRA + L + + +R +G+ + +++ Sbjct: 142 GHTDNVPIQTAQYPSNWELSVDRAVRVVRYLSERQDIDPERFLA-TGYGEFQPVASNETV 200 Query: 327 -MNSANRRIDILVED 340 + NRR++I++ + Sbjct: 201 QGRAKNRRVNIVISE 215 >gi|253998497|ref|YP_003050560.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4] gi|253985176|gb|ACT50033.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4] Length = 313 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 7/201 (3%) Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + + + + + K+++ + + ++ Sbjct: 53 GTAFTGENTPQLNNPPDGNNEHANIKGLYGQPSFIRPLELARRNDKQRREREAMTAMANN 112 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + L + + G+ + I D +F +S P L +I + L Sbjct: 113 LANHLAPMVLEGKIKVMQNNRGVRVDIHDSL---LFAPGASELQPIASGPLNEIAQALKA 169 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + I + GHTD P N NW LS RA S ++L SG+ E R+S + GF + Sbjct: 170 NNHAIQVEGHTDNVPIHNDKFYSNWELSAMRASSVVRMLQDSGLDEKRLSAV-GFGASQP 228 Query: 321 KIASDP--MNSANRRIDILVE 339 + + NRR+ I++ Sbjct: 229 LEDNSTPLGRARNRRVSIMIL 249 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 64/215 (29%), Gaps = 4/215 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ +++ +N W + YADF+T+L AFF+VM+ I++ + + + T Sbjct: 2 RRRQVEEDEDNKERWMVSYADFITLLFAFFVVMYAISSVNQGKYEQLTSSLGTAF----T 57 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 P + I + ++L + Q+++ + + L+N Sbjct: 58 GENTPQLNNPPDGNNEHANIKGLYGQPSFIRPLELARRNDKQRREREAMTAMANNLANHL 117 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + + D +A K + + Sbjct: 118 APMVLEGKIKVMQNNRGVRVDIHDSLLFAPGASELQPIASGPLNEIAQALKANNHAIQVE 177 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + + D R ++ ++ Sbjct: 178 GHTDNVPIHNDKFYSNWELSAMRASSVVRMLQDSG 212 >gi|150397861|ref|YP_001328328.1| hypothetical protein Smed_2663 [Sinorhizobium medicae WSM419] gi|150029376|gb|ABR61493.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419] Length = 342 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 102/329 (31%), Gaps = 28/329 (8%) Query: 37 YAD-FMTVLMAFFLVMWIINATDDDTK---------KAIEQYFNPFGKNLMTASKGIFDE 86 + D T+LMA +M++++ + N L Sbjct: 18 FVDALSTLLMA---IMFLLSVFVTAQFLLGREISGKDEVLNRLNSQINELTQLLALEKSG 74 Query: 87 QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146 + E S N ++ + + + + + + + Sbjct: 75 KQDLEDSLANLQASLSQSEGERSRLQALLDRGAGSAEVADEKIGRLGSELENERQVSARA 134 Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 +++ + + +I + +RL + L+ Sbjct: 135 MSQIELLNQQIAALRSQIAAIEGALQASEAKDEASQAKISDLGRRLNVALAQRVQELNRY 194 Query: 207 VADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL----- 259 +D + + R I I ++ +F + PE + K+ + Sbjct: 195 RSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGNELNPEGQAEMTKLAAAILDLAR 254 Query: 260 ---AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 A V+ + GHTD RDNW LS RA S + L+ GV DR+ G Sbjct: 255 EIPAEINWVLRVDGHTDDVQLSGIGRFRDNWELSSARATSVVKFLISKGVPADRLVAA-G 313 Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDR 341 F ++ SD + NRRI++ + ++ Sbjct: 314 FGEYQPIAPSDTQEARAQNRRIELKLTEK 342 >gi|153005701|ref|YP_001380026.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152029274|gb|ABS27042.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5] Length = 256 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 86/223 (38%), Gaps = 9/223 (4%) Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178 N+ + +L L + + + + +RD L D + ++ + L Sbjct: 24 NKAAEADQLRARGAELEAALSTTQGELASSRDEASA--LKAQLDALSASKQQLQSQVADL 81 Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + K K L+ + + + L + V R + + + D+ +F Sbjct: 82 ATSKTKLETVKAELEKKSSEYEKMANALRGEIDAGRVELTELRGKMTVKMKDK---ILFS 138 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ L+ + EVL I + GHTD P NW LS+ RA + + Sbjct: 139 SGSATLGRAGKDALRAVAEVLTGVEGKVIRVEGHTDNVPLGRGFATNWDLSVARALAVVR 198 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L +SGV R+ +G+ H+ ++D NRRI+I++ Sbjct: 199 FLQESGVQPSRL-AAAGYGEHQPIASNDTPEGRSQNRRIEIVL 240 >gi|323703350|ref|ZP_08115000.1| OmpA/MotB domain protein [Desulfotomaculum nigrificans DSM 574] gi|323531713|gb|EGB21602.1| OmpA/MotB domain protein [Desulfotomaculum nigrificans DSM 574] Length = 263 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 82/202 (40%), Gaps = 11/202 (5%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 ++ K +S +++ + ++ ++ + ++I + Sbjct: 47 YAIASSLAKTMGGSQSIMDNAGAAIVPGAAREKSNEQGMPESVEQRNMESIKRQIQDYID 106 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 + + V G+++S D +F + P + ++ KIG +L + Sbjct: 107 K---NGLSGKVTVAIEERGVVVSFQD---VVLFPLGVADLNPSSTQIVDKIGAILHQTNN 160 Query: 265 VISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 I + GHTD P R NW LSL RA S L++ G+ +R+S +G+ +R + Sbjct: 161 YIRVEGHTDNLPIRTSKFPSNWELSLARAASVVHRLIEYSGIPAERLSA-TGYGEYRPRR 219 Query: 323 ASDP--MNSANRRIDILVEDRQ 342 +D NRR+DI+V + Sbjct: 220 PNDSDANRQQNRRVDIVVLRTK 241 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 38/98 (38%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +KK+ + +N W I Y+D +T+L+ FF+VM+ ++ D + AI Sbjct: 1 MKKRGGGEPEKDNKERWLITYSDLITLLLIFFVVMYTLSKIDANKYYAIASSLAKTMGGS 60 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 + P ++ + +N +K Sbjct: 61 QSIMDNAGAAIVPGAAREKSNEQGMPESVEQRNMESIK 98 >gi|332716479|ref|YP_004443945.1| Flagellar motor protein [Agrobacterium sp. H13-3] gi|325063164|gb|ADY66854.1| Flagellar motor protein [Agrobacterium sp. H13-3] Length = 343 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 105/344 (30%), Gaps = 26/344 (7%) Query: 19 KKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNP 71 + D + + D T+LMA F++ + + + K + N Sbjct: 5 RNRRRDRGVDYWPG----FVDALSTLLMAIMFLLTVFVLAQFVLSREISGKDEVLTRLNS 60 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 L + E + + ++ + + + + Sbjct: 61 QIAELTELLAMEKGSKQDIEDALASLQSTLAASESERSRLQSLLDAGSGNNASANARIGS 120 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 Q + + + + + S+ + ++ +R Sbjct: 121 LTGELDDQRQANSRASAQIELLNQQIAALRAQIASVEAALQASEAKDTSSQVKIADLGRR 180 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETI 249 L + L+ +D + + R I I ++ +F + P+ Sbjct: 181 LNVALAQRVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGNDLNPQGQ 240 Query: 250 VVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVL 299 ++K+ L V+ + GHTD RDNW LS RA S + L Sbjct: 241 AEMEKLAAALIDLAKEIPTEINWVLRVDGHTDNVQLSGSGRFRDNWELSSARATSVVKFL 300 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + GV +R+ GF ++ D + NRRI++ + +R Sbjct: 301 ISKGVPANRLVAA-GFGEYQPIAEGDTPEARQQNRRIELKLTER 343 >gi|226941125|ref|YP_002796199.1| flagellar motor protein MotB [Laribacter hongkongensis HLHK9] gi|226716052|gb|ACO75190.1| MotB [Laribacter hongkongensis HLHK9] Length = 293 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 3/163 (1%) Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + ++ L L ++IS + V +L E T G+ + I+D++N PMFD S Sbjct: 104 EERQRERQVLSKLQQRISMAIESNPVLRKYKNQLLLEMTPEGLKVQIVDEKNRPMFDSGS 163 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299 + LP T +L ++G++ +S+ GHTDA+P+ NW LS DRA +A + L Sbjct: 164 ANLLPHTKDILHELGKMFNDVPNRLSVSGHTDATPYAGGERGYSNWDLSADRANAARREL 223 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + G+ + +I ++ G + +N NRRI I+V ++Q Sbjct: 224 LAGGMQDQKILRVVGLGSANPLDKQNAVNPINRRIAIVVLNKQ 266 >gi|317491635|ref|ZP_07950071.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316921182|gb|EFV42505.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 329 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 3/201 (1%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-T 202 ++ S + + S +RL+ L K+I Sbjct: 66 PLAVALTHGDRSSASTSPIPGGGDDMMQKEGEVAKSMPDPATKADSERLKKLRKQIDQLI 125 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L+ + +L G+ I IID +N PMF+ S+ P +L+ I +L Sbjct: 126 LTDPRLKALQPHLLINMMDEGLRIQIIDSQNRPMFENGSARVEPYMRDILRAIAPILNDV 185 Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 IS+ GHTD P+ + NW LS DRA ++ + L+ G++E +I ++ G A Sbjct: 186 PNKISLSGHTDDLPYASGERGYSNWELSADRANASRRELIAGGLAEGKILRVVGMADTMS 245 Query: 321 KIASDPMNSANRRIDILVEDR 341 + + NRRI ILV ++ Sbjct: 246 LKSQTSDAAINRRISILVLNK 266 >gi|289207762|ref|YP_003459828.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] gi|288943393|gb|ADC71092.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] Length = 325 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 84/335 (25%), Positives = 135/335 (40%), Gaps = 60/335 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 ++ Q II+KKKV ++ GSWK+ +ADF +MAFFL++W++ A DD+ + I +Y Sbjct: 4 EDKTQPIIVKKKVVKG--GHHGGSWKVAFADFAIAMMAFFLLLWLLAALDDEQRAGISEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F + A+ + L Sbjct: 62 FQNPSAFVGEAAA-------------------------------PGQAPGDGTGVDPSLI 90 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E + D E +L ++ D E Sbjct: 91 DFEGMPELIHDPEAMGAPMGLDDEALDELAEARDRE------------------------ 126 Query: 189 KKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 L+ L + + L + +L + T G+ I IID+ N PMFD +SS PLP Sbjct: 127 --ALEVLQEALEEALEQSQALEPYKDQLLLDITPEGLRIQIIDRENRPMFDTASSTPLPH 184 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 +L+++ ++ ISI GHTDA P NW LS DRA +A + L+ G Sbjct: 185 ADAILRELASLINKVPNRISITGHTDARPLLRPDYSNWELSADRANAARRALIAGGAESG 244 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G A DP + NRRI I+V +++ Sbjct: 245 QVARVVGLADSVPFTRDDPEAAINRRISIIVLNQE 279 >gi|254719715|ref|ZP_05181526.1| hypothetical protein Bru83_09258 [Brucella sp. 83/13] gi|265984730|ref|ZP_06097465.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13] gi|306837825|ref|ZP_07470687.1| Hypothetical protein BROD_0631 [Brucella sp. NF 2653] gi|306841432|ref|ZP_07474134.1| Hypothetical protein BIBO2_1217 [Brucella sp. BO2] gi|264663322|gb|EEZ33583.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13] gi|306288538|gb|EFM59890.1| Hypothetical protein BIBO2_1217 [Brucella sp. BO2] gi|306407064|gb|EFM63281.1| Hypothetical protein BROD_0631 [Brucella sp. NF 2653] Length = 343 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 110/326 (33%), Gaps = 22/326 (6%) Query: 37 YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 + D T+L+A F++ + + + + K ++ N + L Sbjct: 19 FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + + N ++ + + + S + + +L + Sbjct: 79 MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + ++ N + +RL + L+ +D Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198 Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259 + + + I I ++ +F S+ P+ V ++K+ + + Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIP 258 Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTD P RDNW LS RA + + L+ +GV +R+ GF Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317 Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341 ++ +D + NRRI++ + +R Sbjct: 318 YQPLDTADTADARARNRRIELKLTER 343 >gi|120555689|ref|YP_960040.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8] gi|120325538|gb|ABM19853.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8] Length = 319 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 5/227 (2%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 + + + F N + + + D E S + E+ + Sbjct: 44 TATATPEQKLAVEGYFKDPVGFTDGGSPNPVDLEGSASVIEEATQDQEASTIQIEDEVVD 103 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 E +++++ Q + + +L + T G+ I I+D+ PM Sbjct: 104 ----ELADTLEQRRMRQLFQEFQERIENSDTLQEFKDQLLLDITDEGLRIQIVDRSGRPM 159 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSA 295 FD + +L ++ + L ISI GHTDA+PF NW LS DRA +A Sbjct: 160 FDSGRDELKYYSQDILFELAKKLGSVDNKISITGHTDATPFSGRPGYTNWELSADRANTA 219 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + L+ GV ++I+++ G + L +P NRRI I+V +++ Sbjct: 220 RRALVAGGVRLEQIARVVGLSDSVLFDKDNPTAPVNRRISIIVLNKK 266 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 72/190 (37%), Gaps = 1/190 (0%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 +Q IIIK+K + ++ GSWK+ +ADF T +MAFFLV+W+ + K A+E YF Sbjct: 2 EEQPIIIKRKKKVV-GGHHGGSWKVAFADFATAMMAFFLVLWLTATATPEQKLAVEGYFK 60 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 S D + + D ++ V ++ T ++++ ++L Sbjct: 61 DPVGFTDGGSPNPVDLEGSASVIEEATQDQEASTIQIEDEVVDELADTLEQRRMRQLFQE 120 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + + L ++ + + + K Sbjct: 121 FQERIENSDTLQEFKDQLLLDITDEGLRIQIVDRSGRPMFDSGRDELKYYSQDILFELAK 180 Query: 191 RLQDLAKKIS 200 +L + KIS Sbjct: 181 KLGSVDNKIS 190 >gi|90418921|ref|ZP_01226832.1| flagellar motor protein [Aurantimonas manganoxydans SI85-9A1] gi|90337001|gb|EAS50706.1| flagellar motor protein [Aurantimonas manganoxydans SI85-9A1] Length = 342 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 107/325 (32%), Gaps = 21/325 (6%) Query: 37 YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 + D T+L+A F++ + + + K + N L Sbjct: 19 FVDALSTLLLAIMFLLSVFVLAQFLLSREITGKDEVLDRLNSQINELTQLLALERSTTQD 78 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 E N ++ + + S + + S++ E + + ++ Sbjct: 79 NEDQIANLRASLAGVEEERSRLQEALESGSGSAAAASARVEGLQTALSEEQELSQRARSQ 138 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + L ++ + ++ + +RL + LS +D Sbjct: 139 VELLNQQLAALRQQIGALERALEVSESRDAESQTKIADLGRRLNVALAQRVQELSRYRSD 198 Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259 + + R I I ++ +F S + + K+ E + Sbjct: 199 FFGRLREILSDRENIRIVGDRFVFQSEVLFPSGSDVLQEAGTDEMAKLAEAIVALNREIP 258 Query: 260 AHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + +I + GHTD P DNW LS +RA + + L+ GV +R+ +GF + Sbjct: 259 SDINWIIRVDGHTDNVPISGGRFEDNWELSTERAGAVVKYLISQGVPPERL-AATGFGEY 317 Query: 319 RLKIASDP--MNSANRRIDILVEDR 341 + + + NRRI+ + +R Sbjct: 318 QPIDPDNTPEARARNRRIEFKLTER 342 >gi|305665914|ref|YP_003862201.1| Thrombospondin type 3 repeat:OmpA/MotB [Maribacter sp. HTCC2170] gi|88710689|gb|EAR02921.1| Thrombospondin type 3 repeat:OmpA/MotB [Maribacter sp. HTCC2170] Length = 446 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 85/280 (30%), Gaps = 16/280 (5%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +G G+ + + D + + Sbjct: 167 FEDYGVKHFQHLAGLAIKFGGTDTDGDGIYDKDDACPEVAGLEAFNGCPDADGDGIEDSK 226 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 ++ + S++ C ++ D C + ++ + ++ + Sbjct: 227 DSCPNAAGSKEMNGCPDADGDGVADKDDACPNEAGTAALAGCPDADGDGVADKDDSCPNE 286 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLF---------ETTRTGILISIIDQRNTPMFDK 239 ++ + V D + + + D T +FD Sbjct: 287 AGPSENKGCPWTDKDGDSVLDKDDQCPDVAGTVANNGCPEVTEEVQKQLNDYARTILFDT 346 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S E+ V+ I ++L+ ++ GHTD+ A+ N LS RA S Sbjct: 347 GKSSIKAESTSVMVDIIQILSEYPTAKFTVEGHTDSV---GSAKLNQTLSESRANSVRDF 403 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 L+ G+ R+S I G+ + ++ NRR++I Sbjct: 404 LIDKGIGSSRLSAI-GYGEDKPIATNNTRSGRKQNRRVEI 442 >gi|320354494|ref|YP_004195833.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122996|gb|ADW18542.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032] Length = 365 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 111/323 (34%), Gaps = 29/323 (8%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + P + W I ++D M + FL ++ + + L Sbjct: 52 RSRTPPRPVH---WSIAWSDLMMTMFILFLTLFA--------------HLRTHEEILAHG 94 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 ++ P ++ Q L S+ + + K + Sbjct: 95 KPNKVADETMPVQTDQTPSALVFHPISQDVSL---TIADDAKDIIPPQREQEGADVLIRH 151 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + L + +S N+ PL + K+++ L + Sbjct: 152 TLTEEKPQPESLAPIPQLPQQPSAPQSANQTAASPAQPLPPAPVPEEKKQEELITKIYDL 211 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S + V +T +I D +F + E +V L+KI ++ Sbjct: 212 SKVALEKEQLDRFASVELVPDKTMRIILTGD----LLFASGQAELTREALVSLKKISALI 267 Query: 260 AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317 + +I++ GHTD P +N NW LSL RA + L++ +G+ + +SG++ Sbjct: 268 KTTPYMINVIGHTDDRPVKNARFPSNWELSLARAGRVARFLIEDTGLPATQF-SVSGYSS 326 Query: 318 HRLKIASDPMNSA--NRRIDILV 338 R + ++ NRR+++++ Sbjct: 327 FRPLKPNTSEDNRKINRRVELVL 349 >gi|254700373|ref|ZP_05162201.1| hypothetical protein Bsuib55_05884 [Brucella suis bv. 5 str. 513] gi|261750869|ref|ZP_05994578.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513] gi|261740622|gb|EEY28548.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513] Length = 343 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 110/326 (33%), Gaps = 22/326 (6%) Query: 37 YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 + D T+L+A F++ + + + + K ++ N + L Sbjct: 19 FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + + N ++ + + + S + + +L + Sbjct: 79 MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + ++ N + +RL + L+ +D Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198 Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259 + + + I I ++ +F S+ P+ V ++K+ + + Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIP 258 Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTD P RDNW LS RA + + L+ +GV +R+ GF Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317 Query: 318 HRLKIASDPM--NSANRRIDILVEDR 341 ++ ++ + NRRI++ + +R Sbjct: 318 YQPLDTANTADTRARNRRIELKLTER 343 >gi|254694373|ref|ZP_05156201.1| hypothetical protein Babob3T_06882 [Brucella abortus bv. 3 str. Tulya] gi|261214683|ref|ZP_05928964.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|260916290|gb|EEX83151.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str. Tulya] Length = 343 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 110/326 (33%), Gaps = 22/326 (6%) Query: 37 YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 + D T+L+A F++ + + + + K ++ N + L Sbjct: 19 FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + + N ++ + + + S + + +L + Sbjct: 79 MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + ++ N + +RL + L+ +D Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198 Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259 + + + I I ++ +F S+ P+ V ++K+ + + Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNPEIP 258 Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTD P RDNW LS RA + + L+ +GV +R+ GF Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317 Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341 ++ ++ + NRRI++ + +R Sbjct: 318 YQPLDTANTADARARNRRIELKLTER 343 >gi|261341475|ref|ZP_05969333.1| chemotaxis protein LafU [Enterobacter cancerogenus ATCC 35316] gi|288316271|gb|EFC55209.1| chemotaxis protein LafU [Enterobacter cancerogenus ATCC 35316] Length = 306 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 64/333 (19%), Positives = 121/333 (36%), Gaps = 62/333 (18%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 + + IIK+ + G+WK+ +AD F L M + Sbjct: 4 TRGKEHTTIIKRSSRKSHDTFHGGAWKVAFAD-------FTLAMMAL------------- 43 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 +M + ++ + + ++ D IT+ + Sbjct: 44 ---FMVLWIMGSVTEEERKEIVSQLNGESIFDGQTLSPITQPNG---------------- 84 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + + + + + + + Sbjct: 85 -------------------VGGKIAVTEKRDRGDHKHPQKETPTPAAMAKSASLDDVKSR 125 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + ++DLA+ I S + + E G+ I I D + MF +SS+I P Sbjct: 126 SQNEIEDLARIIMKITSAY---DAQSNLKIEIVPQGLRILITDDQKREMFQRSSAILTPF 182 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + L I I GHTDA+ FR+ +N+ LS +RA A +VL +G+ + Sbjct: 183 FKRLLTEFAPALNKIDNKIIITGHTDATRFRDQDLYNNYNLSGERAMQARKVLTHAGLDQ 242 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 D++ ++SG A L ++P++S+NRRI+I+V Sbjct: 243 DKVLQVSGMADQMLLDPANPLSSSNRRIEIMVL 275 >gi|307611161|emb|CBX00805.1| hypothetical protein LPW_25091 [Legionella pneumophila 130b] Length = 253 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 117/302 (38%), Gaps = 63/302 (20%) Query: 44 LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103 +MAFFL+MW++ + + K I +YF P + + + + Sbjct: 1 MMAFFLLMWLVASLNKAQKAGIAEYFKQ------------------PMKVALFGGESMGN 42 Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163 T I T+ + ++ ++ + Sbjct: 43 RKATIKGGGPNIEDTDGQVSATNKPLINESIAKDKEIIESQ------------------- 83 Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRT 222 K+L++L +I+ S + K +L + Sbjct: 84 ----------------------ANEIKKLEELKSEINLSMEKDPSLAGLKKQLLMDVVSD 121 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA- 281 G+ I +ID + PMFD S PE +L I ++L I+I+GHTDA+P+ N Sbjct: 122 GLRIQLIDNQKKPMFDVGSDKINPEIEPILANIAKLLNSVPNKITIQGHTDANPYHNPEE 181 Query: 282 --RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 NW LS RA +A + L+K+G+ E+++ ++G++ L +P N NRRI I+V Sbjct: 182 LEYTNWELSAQRANAARRALIKAGMDENKVMTVTGYSSTVLLDKKNPYNPENRRISIIVM 241 Query: 340 DR 341 + Sbjct: 242 KK 243 >gi|23502572|ref|NP_698699.1| hypothetical protein BR1714 [Brucella suis 1330] gi|161619642|ref|YP_001593529.1| hypothetical protein BCAN_A1752 [Brucella canis ATCC 23365] gi|254703491|ref|ZP_05165319.1| hypothetical protein Bsuib36_06117 [Brucella suis bv. 3 str. 686] gi|260568797|ref|ZP_05839265.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40] gi|261754122|ref|ZP_05997831.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686] gi|23348573|gb|AAN30614.1| OmpA family protein [Brucella suis 1330] gi|161336453|gb|ABX62758.1| OmpA/MotB domain protein [Brucella canis ATCC 23365] gi|260154181|gb|EEW89263.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40] gi|261743875|gb|EEY31801.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686] Length = 343 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 110/326 (33%), Gaps = 22/326 (6%) Query: 37 YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 + D T+L+A F++ + + + + K ++ N + L Sbjct: 19 FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + + N ++ + + + S + + +L + Sbjct: 79 MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + ++ N + +RL + L+ +D Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198 Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259 + + + I I ++ +F S+ P+ V ++K+ + + Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEIKKLADAIIQLNREIP 258 Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTD P RDNW LS RA + + L+ +GV +R+ GF Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317 Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341 ++ ++ + NRRI++ + +R Sbjct: 318 YQPLDTANTADARARNRRIELKLTER 343 >gi|294828058|ref|NP_712396.2| endoflagellar motor protein B [Leptospira interrogans serovar Lai str. 56601] gi|304570492|ref|YP_001665.2| motility protein B [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|293385905|gb|AAN49414.2| endoflagellar motor protein B [Leptospira interrogans serovar Lai str. 56601] Length = 336 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 11/239 (4%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 TK+S K +KQ ++ + I L + E ++ + + K +DLE Sbjct: 105 TKSSNKEKELIDENEKQSKKFRDLIDGLKEDLERERENCQKKTEALQKEYERKISDLESR 164 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 I + +SK K L+ +KK L L+ + + + L + + + ++I Sbjct: 165 ILVLNDE----ISKLKHLSENQKKELDRLSDQANELENKLTDEIKKGQIRLKRFHDRLVI 220 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD-N 284 +I D+ FD S+ + + L KI E+L + +I I GHTD P R N Sbjct: 221 NIDDK---ISFDSGSADLKKQILPALDKIKEILGNYPGNLIIIEGHTDNVPIRTKKFSDN 277 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 W+LS +RA S ++S + + R ++G+ + +++D + NRR+DI+V R Sbjct: 278 WQLSGERALSVLHYFLESKILDPRNFSLAGYGEFQPIVSNDTPENRALNRRVDIVVVPR 336 >gi|17986607|ref|NP_539241.1| hypothetical protein BMEI0324 [Brucella melitensis bv. 1 str. 16M] gi|62290586|ref|YP_222379.1| hypothetical protein BruAb1_1699 [Brucella abortus bv. 1 str. 9-941] gi|82700502|ref|YP_415076.1| hypothetical protein BAB1_1726 [Brucella melitensis biovar Abortus 2308] gi|163845293|ref|YP_001622948.1| hypothetical protein BSUIS_B1189 [Brucella suis ATCC 23445] gi|189024803|ref|YP_001935571.1| hypothetical protein BAbS19_I16130 [Brucella abortus S19] gi|225853169|ref|YP_002733402.1| hypothetical protein BMEA_A1766 [Brucella melitensis ATCC 23457] gi|237816090|ref|ZP_04595086.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254689881|ref|ZP_05153135.1| hypothetical protein Babob68_06877 [Brucella abortus bv. 6 str. 870] gi|254698031|ref|ZP_05159859.1| hypothetical protein Babob28_10068 [Brucella abortus bv. 2 str. 86/8/59] gi|254730915|ref|ZP_05189493.1| hypothetical protein Babob42_06907 [Brucella abortus bv. 4 str. 292] gi|256045322|ref|ZP_05448216.1| hypothetical protein Bmelb1R_12582 [Brucella melitensis bv. 1 str. Rev.1] gi|256061749|ref|ZP_05451886.1| hypothetical protein Bneo5_15516 [Brucella neotomae 5K33] gi|256114280|ref|ZP_05455025.1| hypothetical protein Bmelb3E_15803 [Brucella melitensis bv. 3 str. Ether] gi|256258134|ref|ZP_05463670.1| hypothetical protein Babob9C_12474 [Brucella abortus bv. 9 str. C68] gi|256263341|ref|ZP_05465873.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|256370121|ref|YP_003107632.1| flagellar motor protein [Brucella microti CCM 4915] gi|260547172|ref|ZP_05822910.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038] gi|260565786|ref|ZP_05836269.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|260755413|ref|ZP_05867761.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260758635|ref|ZP_05870983.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260762467|ref|ZP_05874804.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260884428|ref|ZP_05896042.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261325753|ref|ZP_05964950.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33] gi|265991747|ref|ZP_06104304.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265995585|ref|ZP_06108142.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|297248983|ref|ZP_06932691.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196] gi|17982219|gb|AAL51505.1| chemotaxis motb protein [Brucella melitensis bv. 1 str. 16M] gi|62196718|gb|AAX75018.1| OmpA family protein [Brucella abortus bv. 1 str. 9-941] gi|82616603|emb|CAJ11682.1| OmpA/MotB domain [Brucella melitensis biovar Abortus 2308] gi|163676016|gb|ABY40126.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189020375|gb|ACD73097.1| OmpA/MotB domain protein [Brucella abortus S19] gi|225641534|gb|ACO01448.1| OmpA/MotB domain protein [Brucella melitensis ATCC 23457] gi|237788753|gb|EEP62965.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|256000284|gb|ACU48683.1| flagellar motor protein [Brucella microti CCM 4915] gi|260095537|gb|EEW79415.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038] gi|260151159|gb|EEW86254.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|260668953|gb|EEX55893.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260672893|gb|EEX59714.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260675521|gb|EEX62342.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260873956|gb|EEX81025.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261301733|gb|EEY05230.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33] gi|262766869|gb|EEZ12487.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263002703|gb|EEZ15106.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|263093340|gb|EEZ17409.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|297174116|gb|EFH33473.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196] gi|326409725|gb|ADZ66790.1| OmpA/MotB domain protein [Brucella melitensis M28] gi|326539433|gb|ADZ87648.1| OmpA/MotB domain protein [Brucella melitensis M5-90] Length = 343 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 110/326 (33%), Gaps = 22/326 (6%) Query: 37 YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 + D T+L+A F++ + + + + K ++ N + L Sbjct: 19 FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + + N ++ + + + S + + +L + Sbjct: 79 MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + ++ N + +RL + L+ +D Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198 Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259 + + + I I ++ +F S+ P+ V ++K+ + + Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIP 258 Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTD P RDNW LS RA + + L+ +GV +R+ GF Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317 Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341 ++ ++ + NRRI++ + +R Sbjct: 318 YQPLDTANTADARARNRRIELKLTER 343 >gi|239832801|ref|ZP_04681130.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239825068|gb|EEQ96636.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 343 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 110/326 (33%), Gaps = 22/326 (6%) Query: 37 YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 + D T+L+A F++ + + + + K ++ N + L Sbjct: 19 FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + + N ++ + + + S + + +L++ Sbjct: 79 MQDTIANLQASLSTAETERSRLQSLLNEGSGAGAAAEKRAGELSASLDAEKQVSARALSQ 138 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + ++ N + +RL + L+ +D Sbjct: 139 VELLNQQISALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198 Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA------- 260 + + + I I ++ +F SS P ++K+ + + Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSSDINPAGQDEMKKLADAVNQLNQEIP 258 Query: 261 -HSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTD P RDNW LS RA + + L+ +GV +R+ GF Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317 Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341 ++ ASD + NRRI++ + +R Sbjct: 318 YQPLDASDTADARAKNRRIELKLTER 343 >gi|307300434|ref|ZP_07580214.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C] gi|307318299|ref|ZP_07597734.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83] gi|306895981|gb|EFN26732.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83] gi|306904600|gb|EFN35184.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C] Length = 342 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 103/346 (29%), Gaps = 32/346 (9%) Query: 20 KVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTK---------KAIEQYF 69 + N + D T+LMA +M++++ + Sbjct: 5 RRREPRAINYWPG----FVDALSTLLMA---IMFLLSVFVTAQFLLGREISGKDEVLNRL 57 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N L + E S N ++ + + + + Sbjct: 58 NSQINELTQLLALEKSGKQDLEDSLANLQASLSQSEGERSRLQALLDRGAGSAEVADEKI 117 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + ++++ + + +I + Sbjct: 118 GRLGSELENERQVSARAMSQIELLNQQIAALRSQIAAIEGALQASEAKDDASQAKIADLG 177 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPE 247 +RL + L+ +D + + R I I ++ +F S PE Sbjct: 178 RRLNVALAQRVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGSDLNPE 237 Query: 248 TIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQ 297 + K+ L A V+ + GHTD RDNW LS RA S + Sbjct: 238 GQTEMAKLATALLDLAKEIPAEINWVLRVDGHTDDVQLSGIGRFRDNWELSSARATSVVK 297 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 L+ GV DR+ GF ++ + + NRRI++ + ++ Sbjct: 298 FLISKGVPADRLVAA-GFGEYQPIAPGESQEARAQNRRIELKLTEK 342 >gi|260768753|ref|ZP_05877687.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972] gi|260616783|gb|EEX41968.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972] Length = 324 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 3/216 (1%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 E + Q E ++L+ D+ + + + + + Sbjct: 50 DDEEGSQLIQYFQTGEVQAHTLSVDALGNSISPIKLPQIATAHIDAEFDRIRDASLIEGE 109 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + + L+ ++ I ++ L + V + T G+ I I D PMF++ S Sbjct: 110 VDTHQELELFSRLIEDQVNEL---DGAGSVNVQITPQGLKIIISDSDKGPMFNRGGSSMT 166 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 P +L + V + I + GHTDAS FR + NW LS +RA SA L GV Sbjct: 167 PYYQDLLLNLAPVFSRVENAIIVTGHTDASRFRGTSMTNWELSSNRANSARYFLNSGGVP 226 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +I ++SG A + +P + NRRI+I + Sbjct: 227 RAQIFQVSGMAESAPLLPENPKSGQNRRIEIFLLTS 262 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 45/142 (31%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 D IIKKK + G WK+ AD M + A FL++W++ DD+ + QYF Sbjct: 2 SQDGVTIIKKKKRGGHGGGHGGGWKVAMADLMISMFALFLILWLLTMMDDEEGSQLIQYF 61 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 T S P + Q E L G + ++ + Sbjct: 62 QTGEVQAHTLSVDALGNSISPIKLPQIATAHIDAEFDRIRDASLIEGEVDTHQELELFSR 121 Query: 130 NIFYLSNSQQSEHCKNSLTRDS 151 I N N Sbjct: 122 LIEDQVNELDGAGSVNVQITPQ 143 >gi|225628282|ref|ZP_03786316.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|254708420|ref|ZP_05170248.1| hypothetical protein BpinM_16075 [Brucella pinnipedialis M163/99/10] gi|254708727|ref|ZP_05170538.1| hypothetical protein BpinB_00411 [Brucella pinnipedialis B2/94] gi|254714572|ref|ZP_05176383.1| hypothetical protein BcetM6_14787 [Brucella ceti M644/93/1] gi|254717469|ref|ZP_05179280.1| hypothetical protein BcetM_13911 [Brucella ceti M13/05/1] gi|256030252|ref|ZP_05443866.1| hypothetical protein BpinM2_06326 [Brucella pinnipedialis M292/94/1] gi|256160427|ref|ZP_05458116.1| hypothetical protein BcetM4_15574 [Brucella ceti M490/95/1] gi|256255633|ref|ZP_05461169.1| hypothetical protein BcetB_15393 [Brucella ceti B1/94] gi|260167927|ref|ZP_05754738.1| hypothetical protein BruF5_06077 [Brucella sp. F5/99] gi|261219302|ref|ZP_05933583.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1] gi|261222836|ref|ZP_05937117.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94] gi|261315919|ref|ZP_05955116.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261316219|ref|ZP_05955416.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94] gi|261322363|ref|ZP_05961560.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1] gi|261757366|ref|ZP_06001075.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99] gi|265987280|ref|ZP_06099837.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis M292/94/1] gi|265998795|ref|ZP_06111352.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1] gi|225616128|gb|EEH13176.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|260921420|gb|EEX88073.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94] gi|260924391|gb|EEX90959.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1] gi|261295053|gb|EEX98549.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1] gi|261295442|gb|EEX98938.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94] gi|261304945|gb|EEY08442.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261737350|gb|EEY25346.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99] gi|262553484|gb|EEZ09253.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1] gi|264659477|gb|EEZ29738.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis M292/94/1] Length = 343 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 109/326 (33%), Gaps = 22/326 (6%) Query: 37 YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 + D T+L+A F++ + + + + K ++ N + L Sbjct: 19 FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + + N ++ + + + S + + +L + Sbjct: 79 MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + ++ N + +RL + L+ +D Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198 Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259 + + + I I ++ +F S+ P+ V ++K+ + Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLANAIIQLNREIP 258 Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTD P RDNW LS RA + + L+ +GV +R+ GF Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317 Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341 ++ ++ + NRRI++ + +R Sbjct: 318 YQPLDTANTADARARNRRIELKLTER 343 >gi|15966529|ref|NP_386882.1| hypothetical protein SMc03992 [Sinorhizobium meliloti 1021] gi|15075800|emb|CAC47355.1| Hypothetical protein signal peptide [Sinorhizobium meliloti 1021] Length = 344 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 103/346 (29%), Gaps = 32/346 (9%) Query: 20 KVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTK---------KAIEQYF 69 + N + D T+LMA +M++++ + Sbjct: 7 RRREPRAINYWPG----FVDALSTLLMA---IMFLLSVFVTAQFLLGREISGKDEVLNRL 59 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N L + E S N ++ + + + + Sbjct: 60 NSQINELTQLLALEKSGKQDLEDSLANLQASLSQSEGERSRLQALLDRGAGSAEVADEKI 119 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + ++++ + + +I + Sbjct: 120 GRLGSELENERQVSARAMSQIELLNQQIAALRSQIAAIEGALQASEAKDDASQAKIADLG 179 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPE 247 +RL + L+ +D + + R I I ++ +F S PE Sbjct: 180 RRLNVALAQRVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGSDLNPE 239 Query: 248 TIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQ 297 + K+ L A V+ + GHTD RDNW LS RA S + Sbjct: 240 GQTEMAKLATALLDLAKEIPAEINWVLRVDGHTDDVQLSGIGRFRDNWELSSARATSVVK 299 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 L+ GV DR+ GF ++ + + NRRI++ + ++ Sbjct: 300 FLISKGVPADRLVAA-GFGEYQPIAPGESQEARAQNRRIELKLTEK 344 >gi|294850964|ref|ZP_06791640.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026] gi|294821607|gb|EFG38603.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026] Length = 343 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 110/326 (33%), Gaps = 22/326 (6%) Query: 37 YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 + D T+L+A F++ + + + + K ++ N + L Sbjct: 19 FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + + N ++ + + + S + + +L + Sbjct: 79 MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLDAEKQVSARALNQ 138 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + ++ N + +RL + L+ +D Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198 Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259 + + + I I ++ +F S+ P+ V ++K+ + + Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAKINPKGQVEMKKLADAIIQLNREIP 258 Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTD P RDNW LS RA + + L+ +GV +R+ GF Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317 Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341 ++ ++ + NRRI++ + +R Sbjct: 318 YQPLDTANTADARARNRRIELKLTER 343 >gi|183598599|ref|ZP_02960092.1| hypothetical protein PROSTU_01997 [Providencia stuartii ATCC 25827] gi|188020776|gb|EDU58816.1| hypothetical protein PROSTU_01997 [Providencia stuartii ATCC 25827] Length = 317 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 2/158 (1%) Query: 185 AMKRKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + R + L + + + + + +L + G+ I I+D N PMF S+ Sbjct: 106 EDQSNYRFEKLKQSLEQAILKDPRLNELKPHLLIDMIDDGLRIQIVDSENRPMFMVGSAY 165 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKS 302 P +L+ I +L ISI GHTD P+ +NW LS DRA ++ + L+ Sbjct: 166 VEPHMRDILRAIAPLLNDVPNKISISGHTDDLPYANGANYNNWELSADRANASRRELIAG 225 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 G+++D+I ++ G A ++ + NRRI I+V + Sbjct: 226 GLNQDKILRVVGMASSIHLDKNNGLAPVNRRISIIVLN 263 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 48/102 (47%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + N+ II KK + GSWKI YADFMT +MAFFLVMW+I+ + I +Y Sbjct: 2 RGNNAHIIRVKKRVASHQNGHGGSWKIAYADFMTAMMAFFLVMWLISISSPQELTQIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110 F K + + D NP ++ + D N+ Sbjct: 62 FRTPLKTAINSGTKSGDATNPIPGGGKDIVFRDGDILPEPNN 103 >gi|150019084|ref|YP_001311338.1| OmpA/MotB domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905549|gb|ABR36382.1| OmpA/MotB domain protein [Clostridium beijerinckii NCIMB 8052] Length = 251 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 11/184 (5%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + + N + S + +++L D+ KK+ ++ + V+ Sbjct: 66 VADNSNSVPDVIESTNSDADEDSNAEREKLSDVKKKVDELVNNS---ELKGSVITSIQER 122 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR 282 G++IS D F+ + P+ L I ++L I + GHTD Sbjct: 123 GLIISFNDS---VFFNSGQAAIKPDWQNKLISISKILNGIDNYIRVEGHTDNVVINTDYF 179 Query: 283 -DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 NW+LS RA + + L+ G V +R+S + G+ +R ++ +ANRR+DI++ Sbjct: 180 HSNWQLSAVRASNVVEFLIYQGNVKPERLSSV-GYGEYRPVKSNTTEEGKAANRRVDIVI 238 Query: 339 EDRQ 342 D + Sbjct: 239 LDTK 242 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 2/90 (2%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +KK++ + W + Y DF+T++M FFL+M+ I+ D K + + Sbjct: 1 MKKRMKREKDD--TERWMLSYLDFITLMMIFFLMMYAISNIDTKKSKTLANSLKIGFNSG 58 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHI 106 + + + DE Sbjct: 59 NGEKVIAVADNSNSVPDVIESTNSDADEDS 88 >gi|304317567|ref|YP_003852712.1| OmpA/MotB domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779069|gb|ADL69628.1| OmpA/MotB domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 240 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 9/148 (6%) Query: 199 ISSTLSGLV-ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I S L L+ +N+ V ++ G +IS+ D +FD S+ P+ L KIG Sbjct: 88 IESQLDKLIKQNNLQNMVTYKVDERGFVISLNDTL---LFDTGSADVKPDQKATLIKIGN 144 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315 +L I + G+TD P N NW LS+ RA + ++L+ + +IS + G+ Sbjct: 145 ILKAMPNYIRVEGYTDNVPINNSQFHSNWELSVIRATNVVEILVNDVKIDPAKISAV-GY 203 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDR 341 +R + +D NRR+DI++ + Sbjct: 204 GEYRPIVPNDSDKNRQLNRRVDIVIMNS 231 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 27/57 (47%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 +++ D+ N W + Y+D +T+LM FF+V++ I+ + + I Sbjct: 1 MRRFDDNDEKKVNNERWLLTYSDMITLLMIFFIVLYTISTVNSQKFQQIAASLGKTF 57 >gi|319952835|ref|YP_004164102.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319421495|gb|ADV48604.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 448 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 86/285 (30%), Gaps = 16/285 (5%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 + F + M G+ + + D Sbjct: 164 QYKHSFEDYLAPHMQHLAGLSIKFGGTDTDGDGIYDKDDACPEVAGLEAFNGCPDADGDG 223 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + ++ + S++ C ++ D C + ++ + ++ + Sbjct: 224 IEDSKDACPNEAGSKEMNGCPDADGDGVADKDDACPNEAGTAALKGCPDADGDGVADKDD 283 Query: 184 L--AMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-------FETTRTGILISIIDQRNT 234 A + L D++ V + + D T Sbjct: 284 ECPAEAGPASNKGCPFLDKDGDGVLDKDDMCPDVAGTVANKGCPEVTAEVQKQLNDYART 343 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 +FD S + V+ I +L ++ GHTD+ A+ N LS RA Sbjct: 344 ILFDTGKSSIKAASTSVMVDIITILKEYPNAKFTVEGHTDSV---GSAKLNQSLSESRAL 400 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 S + L++ G+ E R+S I G+ + ++ NRR++I Sbjct: 401 SVKEFLVEKGIEEFRLSAI-GYGEEKPIASNSTRAGRTQNRRVEI 444 >gi|158422249|ref|YP_001523541.1| flagellar motor protein [Azorhizobium caulinodans ORS 571] gi|158329138|dbj|BAF86623.1| flagellar motor protein [Azorhizobium caulinodans ORS 571] Length = 472 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 100/284 (35%), Gaps = 8/284 (2%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 Q N + A+ + ++ +T Sbjct: 189 QSLNAPTASRPDAAVSARGGGDFATDGDVFSPQPQDAAEAQASAQQANAQATAVGGNGAP 248 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 S ++ ++ D +G+ ++ Sbjct: 249 AAAPKADPSKLDATKAAPSAGKGDMAQGELAKGDAANGAQAKGAAAKGDQAKGEQAKGDA 308 Query: 187 K--------RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + L + + + + V T+ GI++S+ D N MF Sbjct: 309 NAGAATFKIDQANADKLKTEAVAAVQSNLGSVAAPKVDVRVTKEGIVLSLTDDINYSMFP 368 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S++P + + KIGE L + IRG+TD P+R+ DNWRLS RA+ Y + Sbjct: 369 VGSAVPDGRLVRAMAKIGEALGKRPGEVVIRGYTDGRPYRSDTYDNWRLSTARAHMTYYM 428 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 L++ G+ E R++ I G+A LK ++P + NRRI+IL+ Sbjct: 429 LVRGGLQEPRVAMIEGYADRNLKNKAEPYAAENRRIEILLRVPN 472 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 1/202 (0%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 ++ +II K+ ++ ++ +WK+ +ADFMT +MAFFL+MW+IN TD D +KAI Sbjct: 2 ADKGEHHELIIIKRHEDEEHEHHSSAWKVAHADFMTAMMAFFLIMWLINVTDKDVRKAIA 61 Query: 67 QYFNPF-GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 YFNP MT KG+ + ++ + D T + T + KQ + Sbjct: 62 SYFNPVHLAESMTERKGLNEPEDIKPDGTSADGDQKSALKETAGAGTGPGSDTQRGKQDR 121 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + + + E + ++ + + + ++ + + Sbjct: 122 AAFQDPYAVLSKLAGEADPSEMSTPDAAVGETGQPGNSAGDAVRDPFDPVYWQMNQARKM 181 Query: 186 MKRKKRLQDLAKKISSTLSGLV 207 K Q L +S V Sbjct: 182 RTEKPGPQSLNAPTASRPDAAV 203 >gi|315180456|gb|ADT87370.1| chemotaxis LafU protein [Vibrio furnissii NCTC 11218] Length = 324 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 3/216 (1%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 E + Q E ++L+ D+ + + + + + Sbjct: 50 DDEEGSQLIQYFQTGEVQAHTLSVDALGNSISPIKLPQIATAHIDAEFDRMRDASLIEGE 109 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + + L+ ++ I ++ L + V + T G+ I I D PMF++ S Sbjct: 110 VDTHQELELFSRLIEDQVNEL---DGAGSVNVQITPQGLKIIISDSDKGPMFNRGGSSMT 166 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 P +L + V + I + GHTDAS FR + NW LS +RA SA L GV Sbjct: 167 PYYQDLLLNLAPVFSRVENAIIVTGHTDASRFRGTSMTNWELSSNRANSARYFLNSGGVP 226 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +I ++SG A + +P + NRRI+I + Sbjct: 227 RAQIFQVSGMAESAPLLPENPKSGQNRRIEIFLLTS 262 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 46/142 (32%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 D IIKKK + + G WK+ AD M + A FL++W++ DD+ + QYF Sbjct: 2 SQDGVTIIKKKKRGGHSGGHGGGWKVAMADLMISMFALFLILWLLTMMDDEEGSQLIQYF 61 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 T S P + Q E L G + ++ + Sbjct: 62 QTGEVQAHTLSVDALGNSISPIKLPQIATAHIDAEFDRMRDASLIEGEVDTHQELELFSR 121 Query: 130 NIFYLSNSQQSEHCKNSLTRDS 151 I N N Sbjct: 122 LIEDQVNELDGAGSVNVQITPQ 143 >gi|226327780|ref|ZP_03803298.1| hypothetical protein PROPEN_01653 [Proteus penneri ATCC 35198] gi|225203484|gb|EEG85838.1| hypothetical protein PROPEN_01653 [Proteus penneri ATCC 35198] Length = 350 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 5/216 (2%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE--NYFLPPLSKEKILAMKRK 189 ++ +E+ + L EKG+ +T+ ++ N ++ + K Sbjct: 50 SPQELTRVAEYFRTPLKVAIEKGRFSGDATNPIPGGGRDPVYNEGDILPKGQEDKQLNEK 109 Query: 190 KRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ + L + + L+ ++ +L + G+ I IID+ N PMF S+ P Sbjct: 110 QQFRRLKENLEQVILNDPRLKDLKPHLLIDMMDEGLRIQIIDKANRPMFRVGSATVEPYM 169 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L I +L + IS+ GHTD P+ + A NW LS DRA ++ + L+ +G++E Sbjct: 170 KDILTAIAPILNDTPYKISLSGHTDDIPYASGAFKYSNWELSTDRANASRRELIGAGLNE 229 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A + D +ANRRI ILV +Q Sbjct: 230 WKVLRVVGMASTVHLVKEDGFAAANRRISILVLTKQ 265 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + N Q I +KK+ + G+WKI YADFMT +MAFFLVMW+++ + + +Y Sbjct: 2 KSNSQIIRVKKRGRKQH-NAHGGAWKIAYADFMTAMMAFFLVMWLLSISSPQELTRVAEY 60 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKI 98 F K + + D NP ++ + Sbjct: 61 FRTPLKVAIEKGRFSGDATNPIPGGGRDPV 90 >gi|306844705|ref|ZP_07477290.1| Hypothetical protein BIBO1_1384 [Brucella sp. BO1] gi|306274877|gb|EFM56647.1| Hypothetical protein BIBO1_1384 [Brucella sp. BO1] Length = 343 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 111/326 (34%), Gaps = 22/326 (6%) Query: 37 YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 + D T+L+A F++ + + + + K ++ N + L Sbjct: 19 FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + + N ++ + + + S + + + +L + Sbjct: 79 MQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAGELAQSLNAEKQVSARALNQ 138 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + ++ N + +RL + L+ +D Sbjct: 139 VELLNQQIAALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198 Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259 + + + I I ++ +F S+ P+ V ++K+ + + Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIP 258 Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTD P RDNW LS RA + + L+ +GV +R+ GF Sbjct: 259 DDINWVLRVDGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317 Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341 ++ ++ + NRRI++ + +R Sbjct: 318 YQPLDTANTADARARNRRIELKLTER 343 >gi|77456741|ref|YP_346246.1| flagellar motor protein MotB [Pseudomonas fluorescens Pf0-1] gi|77380744|gb|ABA72257.1| chemotaxis MotB protein [Pseudomonas fluorescens Pf0-1] Length = 355 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 72/334 (21%), Positives = 119/334 (35%), Gaps = 63/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ I ++ G+WKI +AD Sbjct: 2 ENNQPIIIKRVKRIA-GGHHGGAWKIAFAD-------------------------FATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S +++ ++ + S + Sbjct: 36 MAFFLVLWLLSTATPEQKIAIAGYFKDPVGFS--------------------ESGTPYII 75 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 ++ + + K + +E + E L L +E + Sbjct: 76 DLGGTPTLAPENTLNPEVKSQPQPDKVTVDTEQVEGMAEQVEKERLELLLQELQNKVDEN 135 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +LQ +I LFE T G+ I I+D N PMFD S+ P Sbjct: 136 PQLQKFKDQI----------------LFEITPNGLRIQIMDAENRPMFDSGSARLKPYFE 179 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + ISI GHTDA P+ NW LS +RA +A + L+ + + Sbjct: 180 DILLAMADTIKAVPNKISISGHTDAKPYVGNGDFGNWELSANRANAARRALVAGSYPDSQ 239 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ G+A L +P N NRRIDI+V ++ Sbjct: 240 VARVVGYASSALFDKENPFNPVNRRIDIVVLTKK 273 >gi|39933998|ref|NP_946274.1| hypothetical protein RPA0921 [Rhodopseudomonas palustris CGA009] gi|192289418|ref|YP_001990023.1| hypothetical protein Rpal_0991 [Rhodopseudomonas palustris TIE-1] gi|39647845|emb|CAE26365.1| possible flagellar motor protein MotB [Rhodopseudomonas palustris CGA009] gi|192283167|gb|ACE99547.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1] Length = 341 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 102/338 (30%), Gaps = 16/338 (4%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + + N + + + L+ FLV+ + + K N Sbjct: 5 RGRRQESGFNYWPGFVDALSTLILGIVFLLTVFLVVQFFLSQEVTGKDKALAELNAKIAQ 64 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 L + E ++ V + Sbjct: 65 LNDILSLEKLGKLNLEEQLAQMRAGLSAAESERDRVKGLYDGLAGAGNDAAGRATELNKA 124 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + +L + + + ++ + + + + +RL Sbjct: 125 LDSEKQISARALAQVEVLNQQIAALRRQLAALEEALDASEKRGKESQNKIADLGQRLNVA 184 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + LS ++ + R I I ++ FD ++ LPE L Sbjct: 185 LAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDTGQALLLPEGRAELD 244 Query: 254 KIGEVLAHS--------TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 K+ + L V+ + GHTD P + NW LS RA S Q LM GV Sbjct: 245 KVADALKELDKKIPAELPWVVRVDGHTDKRPITGSFKSNWELSSARAISVVQYLMSRGVP 304 Query: 306 EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 R+ GFA + +D ++ NRRI++ + +R Sbjct: 305 AQRLVAA-GFAEFQPLDTADTDDAYKRNRRIELKLTER 341 >gi|91216090|ref|ZP_01253058.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC 700755] gi|91185607|gb|EAS71982.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC 700755] Length = 319 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 112/307 (36%), Gaps = 13/307 (4%) Query: 44 LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD---EQNPPERSSQNKIDL 100 L+ F V+ ++ +E F + ++ + D E+ E D Sbjct: 7 LLIGFTVLNLVGCVSQKKFLELEDEFGTLQRVNTQLNRKLDDCNSEKTALEDELSYSKDR 66 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 ++ + + +T + + ++SQ E+ + + Sbjct: 67 IEVLKTQRDDLTKDLQTTKSTLEKLNDSYDALEQNSSQALAANSKQNRELLEQLELKEGA 126 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 E++ ++ L S + + + LS + + +G+ E Sbjct: 127 LAEEQNRLEQLQKDLQARSNQIEELQSLIADKEQKMISLKENLSRALTNFEGQGLSVELR 186 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRN 279 + +S+ N +F S E ++++G+VLA + ++ I GHTD P+ Sbjct: 187 DGKVYVSM---ENKLLFASGSWTVGGEGQKAVKELGKVLADNPDIAVLIEGHTDNVPYGG 243 Query: 280 IAR--DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMN--SANRRI 334 DNW LS RA ++L+K+G ++ ++ G + + + NRRI Sbjct: 244 NGPLTDNWDLSTKRATEVLKLLLKNGKINPQNLTAA-GKGEFAPLVPNTTEEGKAKNRRI 302 Query: 335 DILVEDR 341 ++++ + Sbjct: 303 EVVLTPK 309 >gi|332519379|ref|ZP_08395846.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332045227|gb|EGI81420.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 476 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 95/298 (31%), Gaps = 23/298 (7%) Query: 59 DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118 + K F + S GI + + D + Sbjct: 186 ESKYKH---SFEDYLTKHFQHSAGIAVKFGGKDTDGDGIYDKNDACPEVAGLEAFNGCPD 242 Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178 + + +++ ++ + C ++ GKD C + K++N + + Sbjct: 243 SDGDGIEDAKDDCPNVAGLAEYNGCPDTDGDGVVDGKDDCPTVKGLKALNGCPDADGDGV 302 Query: 179 SKEKIL-AMKRKKRLQDLAKKISSTLSGLVA------------DNIVKGVLFETTRTGIL 225 + +K + + G+V N + ++ Sbjct: 303 ADDKDNCPNEAGPAANSGCPWPDTDGDGVVDKDDKCPNEVGTVANNGCPEVVAQPTQEVI 362 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + T +FD S +T VL+ I +L + +I GHTD+ N Sbjct: 363 DQLNSYARTILFDTGKSSFKEQTKEVLKNITAILKEYPDSNFTIEGHTDSV---GSKSSN 419 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 +LS RA + L+ +G+S R+S GF ++ N NRR +I ++ Sbjct: 420 QKLSERRANAVRDYLIANGISASRLSAY-GFGEDYPVDSNATRNGRKNNRRTEIKLKK 476 >gi|316932465|ref|YP_004107447.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315600179|gb|ADU42714.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1] Length = 341 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 101/338 (29%), Gaps = 16/338 (4%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + + N + + + L+ FLV+ + + K N Sbjct: 5 RGRRQESGFNYWPGFVDALSTLILGVVFLLTVFLVVQFFLSQEVTGKDKALAELNARIAQ 64 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 L + E ++ V + Sbjct: 65 LNDILSLEKLGKLNLEEQLAQMRAGLSAAETERDRVKGLYDGLAGAGNDAAGRAGELGKA 124 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + +L + + + ++ + + + +RL Sbjct: 125 LDSEKQISSRALAQVEVLNQQIAALRRQLAALEDALDASEKRGKESQSRIADLGQRLNVA 184 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + LS ++ + R I I ++ FD ++ LPE L Sbjct: 185 LAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDTGQALLLPEGRAELD 244 Query: 254 KIGEVLAHS--------TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 K+ + L V+ + GHTD P R NW LS RA S Q LM GV Sbjct: 245 KVADALKELDKQIPAELPWVVRVDGHTDRRPITGAFRSNWELSSARAISVVQYLMSRGVP 304 Query: 306 EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 R+ GFA + +D ++ NRRI++ + +R Sbjct: 305 AQRLVAA-GFAEFQPLDTADTEDAYRRNRRIELKLTER 341 >gi|189423111|ref|YP_001950288.1| OmpA/MotB domain protein [Geobacter lovleyi SZ] gi|189419370|gb|ACD93768.1| OmpA/MotB domain protein [Geobacter lovleyi SZ] Length = 271 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 99/324 (30%), Gaps = 68/324 (20%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + N W + YAD F +++ + F T Sbjct: 4 KKEPEKHANHERWLVSYAD-------FITLLFAV--------------FVTMYAMSQTDK 42 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K + + S + + S D+K + + N + +Q Sbjct: 43 KKVEEVAAAMRESFGYSTQAAAGQRGVLQSQDIKPIPAIKPEMAVIPMINKMPPAGPRQG 102 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 K K K ++ + S Sbjct: 103 GMDKGRG---------------------------------------KTKAEEKEFKEIQS 123 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + L+ V TR G+++S+ + FD S++ P +L I E + Sbjct: 124 AIEAYLIKHGAQNKVSIGITRRGLVVSLKEA---GFFDSGSAVIKPAGYQLLNTILEAMT 180 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHH 318 + + + GHTD P NW LS+ RA + + L K+ V ++S +G+ Sbjct: 181 QYSNPLRVEGHTDNIPISTPLFPSNWELSVSRATNVLRYLQKNYDVEPGKLSA-TGYGEF 239 Query: 319 RLKIASDPMNSA--NRRIDILVED 340 R + NRR+DI++ Sbjct: 240 RPTAENSTPEGRSKNRRVDIVLLS 263 >gi|256829772|ref|YP_003158500.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256578948|gb|ACU90084.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028] Length = 300 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 2/188 (1%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + + + P + + K +++ K+ + + + ++ Sbjct: 71 PPSMSVGAGGQSAADPQLKPLIMEGTTGMFAEGKSQEEILKEAMAKMIEERLKEYKEELI 130 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 +T G+ I ++ P FD +SS + VL+ I + + I++ GHTDA P Sbjct: 131 IDTFDNGVRIQMLYGEGNPFFDSASSQLTGDARNVLKVIADTVRDLPNQIAVEGHTDAVP 190 Query: 277 FRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 NW LS DRA SA +L + G+ R+ +++G+A + I +P + NRR+ Sbjct: 191 LGGPSSRYTNWELSTDRASSARVILEEFGLDPKRMVRVAGYAATQPLIRENPEDPRNRRV 250 Query: 335 DILVEDRQ 342 IL+ + Sbjct: 251 SILLFNDP 258 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 8/85 (9%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN--------PFGKNLMTASKGI 83 +WKI YAD +T +MAFFL+MW++N ++ K+ + YF P ++ + Sbjct: 24 AWKIAYADLVTAMMAFFLLMWLLNNVSEEKKEQLSIYFKEFSVIDGLPPSMSVGAGGQSA 83 Query: 84 FDEQNPPERSSQNKIDLSIDEHITK 108 D Q P + + + Sbjct: 84 ADPQLKPLIMEGTTGMFAEGKSQEE 108 >gi|116330986|ref|YP_800704.1| endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124675|gb|ABJ75946.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 340 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 14/230 (6%) Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 S Q K+++ L +N+ +++ K + E K + + ++N Sbjct: 121 ESERQGKKFRDLLDNLKDELEQEKTACQKKAEALQKEYEKKVAYLEAIILALN------- 173 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 +S+ K L+ +KK L LA + + + L + + + ++I+I D+ Sbjct: 174 DEISRLKNLSENQKKELDRLADQANELENKLGDEIKKGQIRLKRFHNRLVINIDDR---I 230 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD-NWRLSLDRAY 293 FD S+ + + L KI E+L + +I I GHTD P R NW+LS +RA Sbjct: 231 SFDSGSAELKKQILPALDKIKEILGNYPGNLIIIEGHTDNVPIRTRKFSDNWQLSGERAL 290 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 S ++S + + R ++G+ + +++D + NRR+DI+V R Sbjct: 291 SVLHYFLESKILDPRNFSLAGYGEFQPIVSNDTPENRALNRRVDIVVVPR 340 >gi|121997035|ref|YP_001001822.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1] gi|121588440|gb|ABM61020.1| OmpA/MotB domain protein [Halorhodospira halophila SL1] Length = 346 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 83/194 (42%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 RD + ++ + L L + + ++ + + + L Sbjct: 64 RDPQAAHPPASRDIIDFEGERRAPIDLSGLPMGQGGFIPTEEMQELAEQFQDAVLDDPDL 123 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268 +L E T G+ I ++D PMF+ S+ P T +L+ + VL +S+ Sbjct: 124 AEYADQILLEITDDGLRIQLVDHDGRPMFELGSADPREHTEEILRALARVLEDVPNPVSL 183 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 GHTDA PF DNW LS DRA +A L+ G+ +RI ++ G+A DP Sbjct: 184 SGHTDARPFARDDYDNWSLSTDRANAARLTLLDGGLPAERIGQVVGYADTVPFDPDDPRA 243 Query: 329 SANRRIDILVEDRQ 342 NRRI +++ R+ Sbjct: 244 DINRRISVVLLSRE 257 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 1/120 (0%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 + + ++IKK D ++ GSWKI +ADFMT + A FLV+W++ A DDD ++ I Q Sbjct: 3 EENKTRPVVIKKVAKHGDD-HHGGSWKIAFADFMTAMFAIFLVLWLLLALDDDQRQGIGQ 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YF AS+ I D + ++ Q Sbjct: 62 YFRDPQAAHPPASRDIIDFEGERRAPIDLSGLPMGQGGFIPTEEMQELAEQFQDAVLDDP 121 >gi|313674311|ref|YP_004052307.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312941009|gb|ADR20199.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 315 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 110/303 (36%), Gaps = 14/303 (4%) Query: 48 FLVMWIINAT---DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104 F+ + I+++ + M + + N E + Sbjct: 7 FIALIILSSVACVTQKKYDELLAEKVKLDAEKMKLEDKVALKNNTIESLEAQLAEEQETL 66 Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 + + S + +Q + N+ + S + K+ ++ + + ++ Sbjct: 67 EQVRKAYQDSQSSLDSLQQQYKTLNDYYDKLMSSSGKLNKDLANKEKQLLQMEADL-EIS 125 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 K N E L + K + + +S + + + E + Sbjct: 126 KQRNDELAANLAEREERVAELEKVLADKEAAVNALKQKVSEALLNFKENDLTVEVKNGKV 185 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 +S+ +Q +F+ S++ + + L+K+ +VL + + I + GHTD P + Sbjct: 186 YVSLAEQL---LFNSGSTVVDTKGVEALKKLAQVLKDNQDVNIVVEGHTDDVPISGNNKY 242 Query: 284 ---NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 NW LS+ RA S ++L +G S +R++ G K ++D NRR +I++ Sbjct: 243 LKDNWDLSVLRATSIVRILTNNGASPERVTAA-GKGEFAPKSSNDSAEGRRENRRTEIIL 301 Query: 339 EDR 341 + Sbjct: 302 TPK 304 >gi|227823348|ref|YP_002827320.1| hypothetical protein NGR_c28210 [Sinorhizobium fredii NGR234] gi|227342349|gb|ACP26567.1| flagellar motor protein [Sinorhizobium fredii NGR234] Length = 343 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 101/329 (30%), Gaps = 28/329 (8%) Query: 37 YAD-FMTVLMAFFLVMWIINATDDDTK---------KAIEQYFNPFGKNLMTASKGIFDE 86 + D T+LMA +M++++ + N L Sbjct: 19 FVDALSTLLMA---IMFLLSVFVTAQFLMGREITGKDEVLNRLNSQINELTQLLALEKSG 75 Query: 87 QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146 + E S N ++ + + + + + + Sbjct: 76 KQDLEDSLANLQASLSQSEGERSRLQSLLDQGAGSADAASQKIGRLGSELENERQISSRA 135 Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 +++ + + +I + +RL + L+ Sbjct: 136 MSQIELLNQQIAALRSQIAAIEGALQASEAKDQSSQAKIADLGRRLNVALAQRVQELNRY 195 Query: 207 VADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL----- 259 +D + + R I I ++ +F S+ PE + K+ L Sbjct: 196 RSDFFGRLREILSDRENIRIVGDRFVFQSEVLFSSGSNDLNPEGQGEMAKLATALLDLAK 255 Query: 260 ---AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 A V+ + GHTD P DNW LS RA S + L+ GV DR+ G Sbjct: 256 EIPAEINWVLRVDGHTDNVPLSGTGRFADNWELSSARATSVVKFLISRGVPADRLVAA-G 314 Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDR 341 F ++ + + NRRI++ + ++ Sbjct: 315 FGEYQPIAVGESLEARAQNRRIELKLTEK 343 >gi|307944516|ref|ZP_07659856.1| OmpA/MotB domain protein [Roseibium sp. TrichSKD4] gi|307772265|gb|EFO31486.1| OmpA/MotB domain protein [Roseibium sp. TrichSKD4] Length = 344 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 115/348 (33%), Gaps = 34/348 (9%) Query: 19 KKVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 + + + + D T+L+ +++++++ + Q + L Sbjct: 6 RARRRNQGTDYWPG----FVDAMATLLL---VIIFLLSIFMLAQF-FLSQQLSGRDTVLN 57 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + I + +L + S+ G ++ + + Sbjct: 58 RLNAQISELTQLLALERAGARELEDTITGLQASLSDATGERDRLLGLLESSSGEADAAGG 117 Query: 138 QQSEHCKNSLTRDSEKGKDLCKST---DLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + ++ + L + ++ ++ L + + + ++ Sbjct: 118 KAAQLENLLDDEKQVSQRALAQVELLNQQISALRRQLAAANAALEASEAKENQSQAKIAS 177 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPL 245 L K++++ L V + F IL D R + +F S Sbjct: 178 LGKRLNAALVQRVQELSRYRSDFFGRLREILSQRSDIRVVGDRFVFQSEVLFGSGSEDIN 237 Query: 246 PETIVVLQKIGEVLAH--------STEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSA 295 PE V L+K+ + + V+ + GHTDA P R +NW LS RA S Sbjct: 238 PEGQVELKKLADAIKELAVQIPDEINWVLRVDGHTDARPLSGTGRLRNNWELSAARAISV 297 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 + L+ G+ R+ GF + D + NRRI++ + +R Sbjct: 298 VRYLVDQGIDPKRLVAA-GFGEFQPLEEGDTPEALAKNRRIELKLTER 344 >gi|241206240|ref|YP_002977336.1| hypothetical protein Rleg_3551 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860130|gb|ACS57797.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 343 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 99/315 (31%), Gaps = 15/315 (4%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 + L+ F+V I + + + + N L + S N Sbjct: 30 IMFLLTVFVVGQFILSREITGRDEVLNRLNSQINELTQLLALEKGSNQDLQDSVANLQAS 89 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 ++ + + + + + + +Q + + +L++ + + Sbjct: 90 LASAEGDRSRLQALLSAGSGGQDAAQKRIGSMTQELDEQKQVSERALSQVELLNQQIAAL 149 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 ++ + RL L+ +D + + Sbjct: 150 RSQIAAVEAALQASEDKDRVSQTKIADLGSRLNVALAARVQELNRYRSDFFGRLREILSD 209 Query: 221 RTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRG 270 R I I ++ +F + PE + K+ L V+ + G Sbjct: 210 RENIRIVGDRFVFQSEVLFPSGGADLNPEGQTEMAKLASALLDLAKEIPPEINWVLRVDG 269 Query: 271 HTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 HTD P RDNW LS RA S + L+ GV DR+ GF + D + Sbjct: 270 HTDNVPLGGTGRYRDNWELSSARAISVVKFLIAQGVPADRLVAA-GFGEFQPIAPGDTPD 328 Query: 329 SA--NRRIDILVEDR 341 + NRRI++ + ++ Sbjct: 329 ARSTNRRIELKLTEK 343 >gi|254473145|ref|ZP_05086543.1| OmpA/MotB [Pseudovibrio sp. JE062] gi|211957866|gb|EEA93068.1| OmpA/MotB [Pseudovibrio sp. JE062] Length = 344 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 113/350 (32%), Gaps = 34/350 (9%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDD----DTKKAIEQYFNPF 72 ++ + + + + + D M+ L+ F+ + I ++ N Sbjct: 4 VRTRRSQSSSEDYWPG----FVDAMSALLLVFIFLLSIFMIAQFFLSQQLSGRDKVLNRL 59 Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 + + ++ + E+ L + D G N++ Sbjct: 60 NQQIAELTELLALEKANVGDLESTISSLQLGLEQASGERDRLQGLLNERSGQIDEAGGAL 119 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ S ++ + + L + I E+ L + + + R+ Sbjct: 120 AALQAKLEGEQNISSKALAQVELLNQQISALRRQIAVLEDA----LDASEKRDRESQTRI 175 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSI 243 DL K+++ L+ V + F IL D + +F Sbjct: 176 ADLGKRLNVALAQRVQELSRYRSDFFGRLREILAQRSDIEVVGDRFVFQSEVLFSSGDEE 235 Query: 244 PLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAY 293 P+ L + + V+ + GHTDA P R DNW LS RA Sbjct: 236 VNPQGRNQLDILASAILELEGQIPDEINWVLRVDGHTDARPLSGTGRLRDNWELSAARAI 295 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDR 341 S + L+ GV DR+ GF + +D + NRRI++ + R Sbjct: 296 SVVKYLISKGVEPDRLVAA-GFGEFQPLEEGTTDEAYAKNRRIELKLTQR 344 >gi|197285528|ref|YP_002151400.1| motility protein B [Proteus mirabilis HI4320] gi|227356023|ref|ZP_03840414.1| flagellar motor protein MotB [Proteus mirabilis ATCC 29906] gi|194683015|emb|CAR43481.1| chemotaxis protein (motility protein B) [Proteus mirabilis HI4320] gi|227163800|gb|EEI48708.1| flagellar motor protein MotB [Proteus mirabilis ATCC 29906] Length = 349 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 3/164 (1%) Query: 182 KILAMKRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + K++ + L + + L ++ +L + G+ I IID+ + PMF Sbjct: 102 EDKQLNEKQQFRKLKENLEQVILQDPRLKDLKPHLLIDMMDEGLRIQIIDKESRPMFKVG 161 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298 S+ P +L I +L S IS+ GHTD P+ + A NW LS DRA ++ + Sbjct: 162 SATVEPYMKDILTAIAPILNDSPYKISLSGHTDDIPYASGALKYSNWELSTDRANASRRE 221 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 L+ +G++E ++ ++ G A + D ANRRI ILV +Q Sbjct: 222 LIGAGLAEWKVLRVVGMASTVHLVKEDGFAPANRRISILVLTKQ 265 >gi|116328262|ref|YP_797982.1| endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116121006|gb|ABJ79049.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 340 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 14/230 (6%) Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 S Q K+++ L +N+ +++ K + E K + ++N Sbjct: 121 ESERQGKKFRDLLDNLKDELEQEKTACQKKAEALQKEYEKKVAYLEARILALN------- 173 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 +S+ K L+ +KK L LA + + + L + + + ++I+I D+ Sbjct: 174 DEISRLKNLSENQKKELDRLADQANELENKLGDEIKKGQIRLKRFHNRLVINIDDR---I 230 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD-NWRLSLDRAY 293 FD S+ + + L KI E+L + +I I GHTD P R NW+LS +RA Sbjct: 231 SFDSGSAELKKQILPALDKIKEILGNYPGNLIIIEGHTDNVPIRTRKFSDNWQLSGERAL 290 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 S ++S + + R ++G+ + +++D + NRR+DI+V R Sbjct: 291 SVLHYFLESKILDPRNFSLAGYGEFQPIVSNDTPENRALNRRVDIVVVPR 340 >gi|312879597|ref|ZP_07739397.1| OmpA/MotB domain protein [Aminomonas paucivorans DSM 12260] gi|310782888|gb|EFQ23286.1| OmpA/MotB domain protein [Aminomonas paucivorans DSM 12260] Length = 242 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 9/162 (5%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 A KR + + ++ L L + + K + + + G+ +S+ +Q +F Sbjct: 79 QDAGDANKRTEQFKQGVAQQLQALAEREGLQKEITVKVNQRGVTVSLSEQ---FLFAPGG 135 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM 300 + P + VL KIG++L +++ GHTD +P R +DNW LS RA L Sbjct: 136 ADLSPLSRRVLFKIGQILKTFPNQLAVEGHTDNAPLRGGLYKDNWGLSAGRAAVVASYLA 195 Query: 301 KS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 + G+S +R+ + G+ + + +D + NRR+D+++ Sbjct: 196 GTVGLSPNRLEAV-GYGSAKPIVPNDTPEHRALNRRVDLVLL 236 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 37/108 (34%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K + Y D +T+L+ FF+ ++ ++ D K + F L Sbjct: 3 RKKKEAQGSAGAPLFMATYGDMVTLLLTFFVFLYSFSSIDVQKFKKMMFSFQGALGVLPG 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 D Q+ D + K V ++ + +++ Q+ Sbjct: 63 GKTIQEDSGVYQGYVGQDAGDANKRTEQFKQGVAQQLQALAEREGLQK 110 >gi|78223750|ref|YP_385497.1| OmpA/MotB [Geobacter metallireducens GS-15] gi|78195005|gb|ABB32772.1| OmpA/MotB [Geobacter metallireducens GS-15] Length = 292 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 86/226 (38%), Gaps = 11/226 (4%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + + + +++ + ++ DL + + E ++ Sbjct: 65 KVREEAAGLAKEKEKLGADNKELEQVLRAKTDTLSQSVADLRQKVTDLETENTRLKAEIA 124 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 R++++++++K L + + V + + ++++D +FD + Sbjct: 125 ETRKAREEKVREVSKTYEDLLDRMKGEIAQGQVTISELKGKLTVNMVDA---ILFDSGKA 181 Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN----IARDNWRLSLDRAYSAYQ 297 + VL K+ ++L + +I I GHTD NW LS RA + + Sbjct: 182 EVKQGGMEVLAKVVDILKGVQDKMIRIEGHTDNVQIVGNLTKRFPTNWELSAARAINVAR 241 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 L G+ + ++ +R ++D + NRRI+I++ R Sbjct: 242 YLQGQGIDPTVLVAVA-NGEYRPVASNDTEEGRAKNRRIEIVLVPR 286 >gi|297180147|gb|ADI16369.1| flagellar motor protein [uncultured bacterium HF130_12L15] Length = 343 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 106/344 (30%), Gaps = 26/344 (7%) Query: 19 KKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNP 71 + + + + D T+L+A F++ + + + K + N Sbjct: 5 RTRRRERGVDYWPG----FVDALSTLLLAIMFLLSVFVLAQFLLSREITGKDEVLTRLNS 60 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 L E N ++ ++ + E Sbjct: 61 QINELTQLLALERSNTQDAEDQLANLQASLQAAETERSRLEQLLSQGAGADAAAEEEIGT 120 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + ++ + + +L++ + + ++ + +R Sbjct: 121 LSGALDEERQISQRALSQVELLNQQIAALRKQIGALEGALEVSEARDRESSTKIADLGRR 180 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETI 249 L + L+ +D + + R I I ++ +F S + Sbjct: 181 LNVALAQRVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGSEVINDAGR 240 Query: 250 VVLQKIGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVL 299 + K+ E + V+ + GHTD P RDNW LS RA S + L Sbjct: 241 TEMAKLAEAIIDLQKEIPPEINWVLRVDGHTDNVPLSGTGRYRDNWELSSARATSVVKYL 300 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + GV R+ GF + + D ++ NRRI++ + +R Sbjct: 301 ISQGVPASRLVAA-GFGEFQPLVEGDTPDARNKNRRIELKLTER 343 >gi|152996653|ref|YP_001341488.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1] gi|150837577|gb|ABR71553.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1] Length = 301 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 2/210 (0%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + + + N + K K DL+ + K Sbjct: 63 QDPTGASTAGYSANPIDLGGSPAKSAEKKLDLQLPQAGSIDVQSRDKFLGNGPDSAESKS 122 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + ++ ++ S ++ L++ + G+ I+++D + PMF++ S+ +P+ Sbjct: 123 INNMLREEMSKMNTLLSQQKNMRIEIT--PLGVRITLLDDPDKPMFERGSARMMPDIENT 180 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 L + + T I I GHTD+S F DNW LS RA +A +L + GV + RI++ Sbjct: 181 LLSMAPIFNKVTNPIVITGHTDSSKFGGGRVDNWDLSALRANAARHILEEGGVEDKRIAQ 240 Query: 312 ISGFAHHRLKIASDPMNSANRRIDILVEDR 341 + G + D ++ NRRI I + Sbjct: 241 VIGLSDTIPYNRLDTDSAENRRISITLLTD 270 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN-PFGK 74 +I++ I ++ G+WKI ADF +MAFFLV+WI++ + ++IE YF P G Sbjct: 9 VIRRVKKIKKGGHHGGAWKIALADFALAMMAFFLVLWIMSVASPEELRSIEGYFQDPTGA 68 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 + S D P +S++ K+DL + + + + Sbjct: 69 STAGYSANPIDLGGSPAKSAEKKLDLQLPQAGSID 103 >gi|307825895|ref|ZP_07656110.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] gi|307733014|gb|EFO03876.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] Length = 313 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 105/310 (33%), Gaps = 33/310 (10%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W + Y D +++ + + ++ + + ++A + + P Sbjct: 30 WLLTYLDVFVLIVMLVITLITVSGINTERQQAAAN------------KPQVIKPKKAPAA 77 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 + + V+ +++ N + ++ E + T ++ Sbjct: 78 ICPPVATSTTINTPSPVVVENDPIKPIILTEHKVEINPDSSNAKTEPIESNSIAHTTNAP 137 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + K ++ + + L++E L + K + + + Sbjct: 138 EIKVATETATNSIATSTNSKQAAANLTEETELQQQLTKAIDEF--------------GLN 183 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 K V + + + I D+ +F S + +L+++ +L S +I I GHT Sbjct: 184 KAVNIKVNQGYAQLEIQDK---VLFKSSEADLTASGGALLKRLMPLLKQSVGLILIEGHT 240 Query: 273 DASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS-- 329 D P + NW L RA S L+ + R+ I+ +A + Sbjct: 241 DNIPIKTAQFPSNWELGASRATSVLHFLVLQQLDSSRLRAIT-YADTMPIADNSTPEGKE 299 Query: 330 ANRRIDILVE 339 NRR++IL++ Sbjct: 300 KNRRVNILIK 309 >gi|225871803|ref|YP_002753257.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196] gi|225791684|gb|ACO31774.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196] Length = 262 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 83/205 (40%), Gaps = 11/205 (5%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 S + + + N +P + A++ ++ L+ + ++ Sbjct: 35 ASSKADLRKQQQFAQSIHSAFTALGLFPENGHGKGPVPEANPPADTALQTQENLEKMREQ 94 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + L+ + V + G++IS+ R +D S+ P P ++ + I Sbjct: 95 LQKKLAAQI---AAHQVALQLGPDGLVISL---REAGFYDSGSATPKPSSMGAVGIIAHE 148 Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316 L + I GHTD P NW LS RA + ++L+++ GV+ R+S G+A Sbjct: 149 LYQVPYALRIEGHTDNVPIHTAKFDSNWELSTARATTMARLLIENFGVAPQRLSAA-GYA 207 Query: 317 HHRLKIASDPM--NSANRRIDILVE 339 + ++ + NRR+DI+V Sbjct: 208 QYHPIASNATAAGRAENRRVDIIVL 232 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 1/96 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + PN+ W + YADF+T+L AFF+V++ + D ++ Q + L Sbjct: 2 RRKRHESHPNH-ERWLVSYADFITLLFAFFVVLYASSKADLRKQQQFAQSIHSAFTALGL 60 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 + + PE + L E++ K L+ Sbjct: 61 FPENGHGKGPVPEANPPADTALQTQENLEKMREQLQ 96 >gi|218658934|ref|ZP_03514864.1| flagellar motor protein MotB [Rhizobium etli IE4771] Length = 151 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 60/152 (39%), Positives = 96/152 (63%), Gaps = 1/152 (0%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 K +I+ + G VA + +G+ G+L+SI DQ + MF+ S++P E + Sbjct: 1 KEADAFQHQIAQQI-GGVAGKLAEGLTVTAAEGGLLVSISDQNDDSMFNIGSAVPRQEMV 59 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 + +++IG +L ++IRGHTD ++ +NWRLS+DRA SAY +L++ G+ E RI Sbjct: 60 LAMERIGTILKERGGAVAIRGHTDGRQYKGAQNENWRLSMDRAQSAYYMLVRGGLDEKRI 119 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 S++SGFA RLK+ ++P N+ANRRI+ILV+ Sbjct: 120 SQVSGFADRRLKLPAEPFNAANRRIEILVQAD 151 >gi|296188354|ref|ZP_06856746.1| putative chemotaxis protein MotB [Clostridium carboxidivorans P7] gi|296047480|gb|EFG86922.1| putative chemotaxis protein MotB [Clostridium carboxidivorans P7] Length = 277 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 10/158 (6%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + +++DL KK+ S L + + V E G+++S+ D F+ + + Sbjct: 85 EESKMEDLKKKVDSYLQK---NGMQNSVTTEVDERGLVVSLRDTL---FFETGKAEVIAA 138 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSE 306 + L +IG++L + I GHTD P N NW+LS RA + ++L+ +GV Sbjct: 139 SQGKLVEIGKILNQLDNTMRIEGHTDNVPIHNEQFSDNWQLSSARALNVTELLIANGVPP 198 Query: 307 DRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 ++S ++ + +R + + + NRR+DI+V + Sbjct: 199 KKLSSVA-YGEYRPVLDNSTEDGRARNRRVDIIVVSNK 235 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + N W + Y+DFMT+LM F+V++ ++ D + Q + Sbjct: 2 KKKKQEEHENSERWLLSYSDFMTLLMILFVVLYAMSNVDKAKFSQLSQSMSIAMGGGKIM 61 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 S N D +E ++ Sbjct: 62 QGNENSPNISNSSPSGNSSDGKTEESKMED 91 >gi|300023960|ref|YP_003756571.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525781|gb|ADJ24250.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 342 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 93/271 (34%), Gaps = 21/271 (7%) Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 + +Q+ D T +S+ + + S ++ Sbjct: 73 KGKAQSSQDELAALQATLSSLKTENEKLTGVGLGADERAKSAEDKLAGLSSDLQSQKNIS 132 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 E + ++ ++ L + + K ++DL ++++ L+ V + Sbjct: 133 DEALSKVDLLNQQLIALRRQIAGLSDALDAAEKKGAESDKTIKDLGARLNAALAQQVQEL 192 Query: 211 IVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLPETIVVLQKIGEVL-- 259 F +L D R + +F S+ PE + + +I E + Sbjct: 193 KRYRSDFFGRLRELLKDRKDIRVVGDRFVFESEVLFSSGSASLTPEGMAAMDQIAEAILE 252 Query: 260 ------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + I GHTDA P N NW LS RA S + L+ GV DR+ Sbjct: 253 LQKEIPGDIDWALQINGHTDARPISNPQYPSNWELSTARAASVVKYLVLRGVPADRLVAA 312 Query: 313 SGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 G+ + AS+ + NRRI++ + R Sbjct: 313 -GYGEFQPVDASNTEEAYQRNRRIELKLTSR 342 >gi|300694372|ref|YP_003750345.1| chemotaxis protein motb (motility protein b), flagellar motor protein [Ralstonia solanacearum PSI07] gi|299076409|emb|CBJ35725.1| Chemotaxis protein motB (Motility protein B), flagellar motor protein [Ralstonia solanacearum PSI07] Length = 314 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 3/201 (1%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK-ILAMKRKKRLQDLAKKISSTL 203 ++ L S +++++ + P + +++ + L L + I + Sbjct: 72 FGGAGSGDQSSILNGSPAIKQNMPQPNPSPSPTVQRQRNVRDESDDAALNKLKQHIMEMI 131 Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 V + +L + T G+ I I+DQ+N PMF +S+ P +L+++G L Sbjct: 132 ESNPVMNQFKHQLLIDMTSEGLRIQIVDQQNRPMFANASAEVQPYMRTILRELGAALNDV 191 Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 IS+ GHTDA+ + NW LS DRA ++ + L+ G+ ++++++ G Sbjct: 192 PNPISLSGHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVPL 251 Query: 322 IASDPMNSANRRIDILVEDRQ 342 +D N NRRI I+V + + Sbjct: 252 DKTDAFNPINRRISIVVLNNR 272 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 52/117 (44%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + + I+ ++ ++ G+WKI YADF+T +MAFFL+MW++++ ++E Y Sbjct: 3 KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 F K + G D+ + S K ++ +V + ++ Sbjct: 63 FRTPLKVALFGGAGSGDQSSILNGSPAIKQNMPQPNPSPSPTVQRQRNVRDESDDAA 119 >gi|153008534|ref|YP_001369749.1| hypothetical protein Oant_1203 [Ochrobactrum anthropi ATCC 49188] gi|151560422|gb|ABS13920.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188] Length = 343 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 111/326 (34%), Gaps = 22/326 (6%) Query: 37 YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 + D T+L+A F++ + + + + K ++ N + L Sbjct: 19 FVDALTTLLLAIMFLLTVFVLAQFLLSREVNNKDSVLARLNSQIQELTQLLSLERSNSQD 78 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + + N ++ + + + S + + +L++ Sbjct: 79 MQDTIANLQASLSSTESERSRLQSLLNEGSGAGAAAEKRAGELSESLDAEKQVSARALSQ 138 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + ++ N + +RL + L+ +D Sbjct: 139 VELLNQQISALRRQIAALEDALNASESRDRESNAKIADLGRRLNVALAQRVQELNRYRSD 198 Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259 + + + I I ++ +F S+ P ++K+ + + Sbjct: 199 FFGRLREILSDKENIRIVGDRFVFQSEVLFPTGSADINPAGQDEMKKLADAVIQLNQEIP 258 Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTD P RDNW LS RA + + L+ +GV +R+ GF Sbjct: 259 DDINWVLRVDGHTDNVPLTGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGE 317 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 ++ ASD ++ NRRI++ + +R Sbjct: 318 YQPLDASDTADARSKNRRIELKLTER 343 >gi|223936109|ref|ZP_03628023.1| OmpA/MotB domain protein [bacterium Ellin514] gi|223895331|gb|EEF61778.1| OmpA/MotB domain protein [bacterium Ellin514] Length = 280 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 11/209 (5%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +E L K ++ + + N++ + L + K K+++ AK Sbjct: 46 ATTEGQLRGLEPLPAKLQEAKGNLAKALAENQKNQEQISELQAQVADLQKEKEKVGQTAK 105 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + D + V + + ++I+D+ MFD + P+ VL+KI Sbjct: 106 GLEDEMRS---DLESRDVTISNLKGKLTVNILDR---VMFDSGEAAVKPDGESVLRKIAT 159 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315 +LA E I + GHTD P RN NW LS RA +A + + GV R+ G+ Sbjct: 160 ILAGHPELKIQVIGHTDNVPIRNRFASNWELSAARAIAAVHFITEKAGVDPRRVGAA-GY 218 Query: 316 AHHRLKIASDPM--NSANRRIDILVEDRQ 342 +R + + NRRI I + + Sbjct: 219 GEYRPIADNSTAEGRARNRRIAITILPDE 247 >gi|291280094|ref|YP_003496929.1| flagellar motor protein MotB [Deferribacter desulfuricans SSM1] gi|290754796|dbj|BAI81173.1| flagellar motor protein MotB [Deferribacter desulfuricans SSM1] Length = 249 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 14/178 (7%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + + + L + + +++ L L I N+ + T Sbjct: 60 EAGRKSEMGKEEILSKMDFVDKVKKSQEQMLSGLKNYIEQA-------NLSSQISVVKTD 112 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281 GI + I+D +F S+ LP I +L+K+ V+ + I + GHTD P Sbjct: 113 KGISVRIMDS---VLFAPGSAEILPSAIPILEKLAAVMRDTPYNILVEGHTDDIPISTPK 169 Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 NW LS RA + + L+ GV +++S G+A + + + + NRR++I Sbjct: 170 YPSNWELSTARAVAVVKFLISRGVKPEKLSAA-GYAQYHPLVPNITPENRAKNRRVEI 226 Score = 38.4 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 27/89 (30%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 ++ W + ++D T+L+ FF+++ + + D K L Sbjct: 4 KKCEECKAGAPEWMVTFSDMTTLLLTFFVLLLSMASLDQRKIKEALGSLQGALGVLEAGR 63 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKN 109 K ++ + E + Sbjct: 64 KSEMGKEEILSKMDFVDKVKKSQEQMLSG 92 >gi|302873043|ref|YP_003841676.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans 743B] gi|307688801|ref|ZP_07631247.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans 743B] gi|302575900|gb|ADL49912.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B] Length = 256 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 77/200 (38%), Gaps = 11/200 (5%) Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 T S L L+ + + S E ++L + +++ ++ Sbjct: 55 GTSPSGGAGVLDGGQGLDMATLSQAVKDAASKSAELDYEKLEAEKLTKVKEQVDKLIAES 114 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 + G++I++ D FD + + L + ++L+ + Sbjct: 115 ---ELNGSATTAIEERGLVITVKDNL---FFDSGKATVKEQYKRQLNALSKILSSIDNYV 168 Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIAS 324 + GHTD P + NW+LS RA + ++ + G++ +R+ + G+ +R + Sbjct: 169 RVEGHTDNVPIKTPYFNSNWQLSSIRASNVVEIFATECGLNPNRLLPV-GYGEYRPIATN 227 Query: 325 DPMNSA--NRRIDILVEDRQ 342 NRR+DI++ + + Sbjct: 228 ATEEGRAANRRVDIVILNSK 247 >gi|311695399|gb|ADP98272.1| OmpA/MotB domain protein [marine bacterium HP15] Length = 246 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 2/190 (1%) Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVK 213 + + + + +++ ++R+Q+L +++ + Sbjct: 4 EGSASVVNEASPDIESSQIQIEDEVVDELSETLEQRRMQELFQELKEQIKQDETLQEFKD 63 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 +L + T G+ I I+D+ PMFD + + +L ++ + L +SI GHTD Sbjct: 64 QLLIDITDEGLRIQIVDRSGRPMFDSGRAELKYYSQDILFELAKTLGSVNNKLSITGHTD 123 Query: 274 ASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332 ++PF NW LS DRA +A + L+ GV + +I+++ G + L DP NR Sbjct: 124 STPFSGRPGYTNWELSADRANTARRALVAGGVRQQQIARVVGLSDSVLFDKEDPNAPVNR 183 Query: 333 RIDILVEDRQ 342 RI I+V +++ Sbjct: 184 RISIIVLNKK 193 >gi|328542518|ref|YP_004302627.1| OmpA family protein [polymorphum gilvum SL003B-26A1] gi|326412264|gb|ADZ69327.1| OmpA family protein [Polymorphum gilvum SL003B-26A1] Length = 343 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 102/344 (29%), Gaps = 26/344 (7%) Query: 19 KKVAIDDTPNNLGSWKIVYAD-FMTVLMAF------FLVMWIINATDDDTKKAIEQYFNP 71 + + + D T+L+ F++ + + + N Sbjct: 5 RVRRRPQGTDYWPG----FVDAMATLLLVIIFLLSIFMLAQFFLSQQLSGRDTVLNRLNA 60 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 L E + + ++ + + + Sbjct: 61 QISELTELLALERASSRELEDTITTLQASLGEATSERDRLVGLLDDRSGAAAAAGGRAAA 120 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 ++ + + +L + + + + N + + +R Sbjct: 121 LEGMLDEEKQISQRALAQVELLNQQIAALRRQLAAANAALEASEAKEQESQAKIASLGRR 180 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETI 249 L + LS +D + + R+ I + ++ +F S P Sbjct: 181 LNAALVQRVQELSRYRSDFFGRLREILSQRSDIRVVGDRFVFQSEVLFPSGSDEINPAGT 240 Query: 250 VVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVL 299 V L K+ E + V+ + GHTD+ P R +NW LS RA S + L Sbjct: 241 VELGKLAEAILELEAQIPEEINWVLRVDGHTDSRPLSGTGRLRNNWELSSARAISVVRYL 300 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 + GV R+ GF + D + NRRI++ + +R Sbjct: 301 IDRGVDPKRLVAA-GFGEFQPLEDGDSPEALARNRRIELKLTER 343 >gi|224824155|ref|ZP_03697263.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002] gi|224603574|gb|EEG09749.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002] Length = 302 Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 86/173 (49%), Gaps = 3/173 (1%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQ 231 + + K RL L KKI S + V + E T G+ I I+D+ Sbjct: 93 QAGQVKRAREEEIQQEKTRLAKLQKKIESNIEQSAVLKAYKNQLQLEMTPEGLRIQIVDE 152 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSL 289 +N PMFD S+ LP T +LQ++G+ L +SI GHTDA PF NW LS Sbjct: 153 QNRPMFDSGSANLLPHTRTILQELGKELNGVANRLSISGHTDAKPFGGAQHGYSNWELSA 212 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 DRA +A + L+ G+ D+I ++ G A I S+ + NRRI I+V +++ Sbjct: 213 DRANAARRELLAGGLMHDKILRVVGLAAANPLIRSNVFSPENRRIAIVVLNKE 265 >gi|238919361|ref|YP_002932876.1| OmpA family protein [Edwardsiella ictaluri 93-146] gi|238868930|gb|ACR68641.1| OmpA family protein [Edwardsiella ictaluri 93-146] Length = 270 Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 3/201 (1%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-T 202 K +L+ + ++E + + RL+ L +++ Sbjct: 68 KVALSGGQRSSDSFSPIPGGGDDVTRKEGEVRKFAADPDPKTRTDQMRLKRLRERLEQLI 127 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 LS + ++ T G+ I I+D + PMF S+ P +L+ I +L Sbjct: 128 LSDPRLKLLRPHLMINMTDEGLRIQIVDSQKRPMFKNGSAQVEPYMRYILRAIAPILNEL 187 Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 IS+ GHTD P+ N NW LS DRA ++ + LM G+ ++I ++ G A Sbjct: 188 PNKISLSGHTDDLPYANGEKGYSNWELSADRANASRRELMAGGLDSNKILRVVGMADTMN 247 Query: 321 KIASDPMNSANRRIDILVEDR 341 + NRRI ILV ++ Sbjct: 248 LHNMAGNAAENRRISILVLNK 268 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 68/168 (40%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 I++KKK + ++ GSWKI YADFMT +MAFFLVMW++ I +YF Sbjct: 4 GKQPVILVKKKRSSHAQASHGGSWKIAYADFMTAMMAFFLVMWLLAIASPQELTRIAEYF 63 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 K ++ + D +P + + D K + + + R Sbjct: 64 RTPLKVALSGGQRSSDSFSPIPGGGDDVTRKEGEVRKFAADPDPKTRTDQMRLKRLRERL 123 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 LS+ + + + +++G + ++ + K + + P Sbjct: 124 EQLILSDPRLKLLRPHLMINMTDEGLRIQIVDSQKRPMFKNGSAQVEP 171 >gi|300697987|ref|YP_003748648.1| Chemotaxis protein motB (Motility protein B), flagellar motor protein [Ralstonia solanacearum CFBP2957] gi|299074711|emb|CBJ54269.1| Chemotaxis protein motB (Motility protein B), flagellar motor protein [Ralstonia solanacearum CFBP2957] Length = 314 Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 2/194 (1%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVAD 209 + + + + I L L + I + V + Sbjct: 79 DQSSILQGSPAIKQNMPQPNPSPSPTAQRQRNIRDESDDAALNKLKQHIMEMIESNPVMN 138 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 +L + T G+ I I+DQ+N PMF +S+ P +L+++G L IS+ Sbjct: 139 QFKHQLLIDMTSEGLRIQIVDQQNRPMFGNASAEVQPYMRTILRELGAALNDVPNPISLS 198 Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 GHTDA+ + NW LS DRA ++ + L+ G+ ++++++ G +D N Sbjct: 199 GHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVPLDKTDAFN 258 Query: 329 SANRRIDILVEDRQ 342 NRRI I+V + + Sbjct: 259 PINRRISIVVLNNR 272 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 52/117 (44%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + + I+ ++ ++ G+WKI YADF+T +MAFFL+MW++++ ++E Y Sbjct: 3 KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 F K + G D+ + + S K ++ + + ++ Sbjct: 63 FRTPLKVALFGGAGSGDQSSILQGSPAIKQNMPQPNPSPSPTAQRQRNIRDESDDAA 119 >gi|260892160|ref|YP_003238257.1| OmpA/MotB domain protein [Ammonifex degensii KC4] gi|260864301|gb|ACX51407.1| OmpA/MotB domain protein [Ammonifex degensii KC4] Length = 268 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 72/211 (34%), Gaps = 8/211 (3%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 S + + G + + P K + Sbjct: 38 SKIDAEKFAGIAEALARALGGGAGMILEGQGPAVVSGAPKFEPGEDAKFALSGGGEENLQ 97 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L K + + + G+++S++D +F S+ P+ V+++ Sbjct: 98 LEKIKAEIEKYAREKGLQAKITARIEERGLVVSVLDT---VLFPIGSAELTPQAKEVVRE 154 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKI 312 +G++L + I GHT P NW LS+ RA S Q L+ + R+ Sbjct: 155 VGKILLKMPNCVRIEGHTCDLPIHTPRYPSNWELSVARATSVVQELIHTVNFPPQRLCAC 214 Query: 313 SGFAHHRLKIASDPM--NSANRRIDILVEDR 341 G+A +R + +D NRR+D +V Sbjct: 215 -GYAEYRPLVPNDSEEHRQMNRRVDFVVLRS 244 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 3/93 (3%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 + T + W I YAD +T+L+ FF+V++ + D + I + + L + Sbjct: 5 KRELTEASRERWLITYADLITLLLIFFIVLYTFSKIDAEKFAGIAEAL---ARALGGGAG 61 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 I + Q P S K + D + + Sbjct: 62 MILEGQGPAVVSGAPKFEPGEDAKFALSGGGEE 94 >gi|308071044|ref|YP_003872649.1| flagellar motor protein [Paenibacillus polymyxa E681] gi|305860323|gb|ADM72111.1| Flagellar motor protein [Paenibacillus polymyxa E681] Length = 271 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 87/314 (27%), Gaps = 65/314 (20%) Query: 29 NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88 + W I YAD +T+L+ FF+VM+ +++ D + Q + EQ Sbjct: 17 HRDRWMITYADLITLLLIFFVVMYAMSSLDAKKYDVVVQSLQDTFHKGDS-----ILEQG 71 Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 + ++ + + D K + + + ++ + + Sbjct: 72 SGITGTADRYTSKNPPTTKQPAADKKEAGSTKLTEREQAFRTQEKELQNLMGVIQEYITD 131 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 E + + F + K + +L L + + + Sbjct: 132 NKLENQIFVSDQPRGIVITLNDRFLFDQGRAALKQGSANTLSKLASLFRDLKTP------ 185 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268 ISI + F +SS+ Sbjct: 186 -----------------ISIEGHTDNIPFTRSSNSST----------------------- 205 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 +DNW LS RA S + + + +G+A R + Sbjct: 206 ------------YKDNWELSGARALSVLRFFLDREQLSPSGFQYAGYADTRPVGDNSTEA 253 Query: 329 SA--NRRIDILVED 340 NRR++I V Sbjct: 254 GRQKNRRVEITVLR 267 >gi|254500358|ref|ZP_05112509.1| OmpA family protein [Labrenzia alexandrii DFL-11] gi|222436429|gb|EEE43108.1| OmpA family protein [Labrenzia alexandrii DFL-11] Length = 344 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 108/344 (31%), Gaps = 26/344 (7%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 + + + D M L+ + + I + L Sbjct: 6 RSRRRAQQTDYWPG----FVDAMATLLLVIIFLLSIFMIAQFFLSQQLSGRDTVLNRLNA 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + + SS D + + +S + + + + +Q Sbjct: 62 QISELTELLALERASSGELEDTILGLQASLSSAEAEQSRLLGLLESSSGDAEAAGGRAAQ 121 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + E + ++ ++ L + + + ++ L ++ Sbjct: 122 LENLLDDERQVSQEALAQVELLNQQIAALRRQIAAANAALEASEAKEAESQAKIASLGRR 181 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQ---------RNTPMFDKSSSIPLPETI 249 +++ L V + F IL D ++ +FD S PE Sbjct: 182 LNAALVQRVQELSRYRSDFFGRLREILSQRSDISVVGDRFVFQSEVLFDSGSEDINPEGQ 241 Query: 250 VVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVL 299 L K+ E + V+ + GHTDA P R +NW LS RA S + L Sbjct: 242 QELDKLAEAILELSGQIPDEINWVLRVDGHTDARPLSGTGRLRNNWELSAARAISVVRYL 301 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 ++ GV R+ GF + S+ + + NRRI++ + +R Sbjct: 302 IEKGVDPKRLVAA-GFGEFQPLEESETPDALAKNRRIELKLTER 344 >gi|225849649|ref|YP_002729883.1| flagellar motor protein MotB [Persephonella marina EX-H1] gi|225645473|gb|ACO03659.1| flagellar motor protein MotB [Persephonella marina EX-H1] Length = 231 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 6/153 (3%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L+ K+ L+ L G+ E + G +I MF S+ P E + Sbjct: 82 KLKKKRNKLQKDLNRLEQLLEKAGIEAEVEKHGSIIRFRLNTER-MFPSGSATPYKEVVP 140 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L ++ + L + I+I GHTD +P + N LS +RA S ++ G DR+ Sbjct: 141 LLLEVCKRLKETQFPITIEGHTDNTPI--RFKSNLELSAERALSVLKLFKSCGY-PDRLL 197 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 G+ +R + +D + NRRI+I+++ Sbjct: 198 SARGYGEYRPLVPNDTPENRAKNRRIEIVIDTS 230 >gi|332291754|ref|YP_004430363.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332169840|gb|AEE19095.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 471 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 81/304 (26%), Gaps = 16/304 (5%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + +W+ + + + F G I + D Sbjct: 171 VKIWLGENINVGVQSKYKHAFEDEGIKHFQHVAAIGIVFGGKDTDGDGIYDKEDACPEVA 230 Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 + + + ++ ++ + + C ++ KD C + ++ Sbjct: 231 GLPEFNGCPDSDGDGIEDSKDACPTVAGLAEFDGCPDTDGDGIPDPKDACPTVAGVAALG 290 Query: 169 KEENYFLPPLSKEKILAMKRKK---------RLQDLAKKISSTLSGLVADNIVKGVLFET 219 + + +D + V Sbjct: 291 GCPDADGDGIKDADDACPNEAGPRSNNGCPFEDKDGDGVLDKDDECPDVAGTVANNGCPE 350 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFR 278 +L + + +FD + + E+ L K+ V+ I GHTD Sbjct: 351 VSVEVLNELNLETKKVLFDYNKASIRTESYATLDKVASVMMEYPTTRFLIEGHTDDR--- 407 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 N LS RA S L G+ R+ GF R ++ NRR+++ Sbjct: 408 GRDAYNLDLSDQRAASVRSYLTGKGIPAARLES-KGFGEARPVASNKTAAGRQENRRVEL 466 Query: 337 LVED 340 + + Sbjct: 467 SILE 470 >gi|332520949|ref|ZP_08397409.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332043479|gb|EGI79675.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 442 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 79/270 (29%), Gaps = 28/270 (10%) Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 + GI + P+ + ID ++ N + Sbjct: 198 VDACPDLFGIIEANGCPDADGDSVIDSEDLCPNDFGPTTMRGCPDNDGDGTPDKYDKCPT 257 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 + + + C T K + + +++ LA +++ Sbjct: 258 VKGAINDDGCPRIDTDGDGIDDRFDKCPKQPGVKENQGCPKVLTPQEKQQLANLERQKNL 317 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 D KI ++ + + V F+ + PE L Sbjct: 318 DRNAKIKQQVTNDINNYCKAIV---------------------FNYGKTSLSPEGKKALD 356 Query: 254 KIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +I +++ + + GHTD N LS RA S L+ G+S R++ Sbjct: 357 EIYKIMNLQKNMKFHVTGHTDNV---GSKATNLALSEKRAASVKNYLITKGISNSRVTS- 412 Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVED 340 G+ + NRRI+I + + Sbjct: 413 QGYGEENPIADNSTNEGRIKNRRIEIYITN 442 >gi|83747601|ref|ZP_00944638.1| Probable chemotaxis motB protein [Ralstonia solanacearum UW551] gi|207738644|ref|YP_002257037.1| chemotaxis protein (motility protein b) [Ralstonia solanacearum IPO1609] gi|83725781|gb|EAP72922.1| Probable chemotaxis motB protein [Ralstonia solanacearum UW551] gi|206592012|emb|CAQ58918.1| chemotaxis protein (motility protein b) [Ralstonia solanacearum IPO1609] Length = 314 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 3/201 (1%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI-LAMKRKKRLQDLAKKISSTL 203 ++ L S +++++ + P + +++ L L + I + Sbjct: 72 FGGAGSGDQSSILQGSPAIKQNMPQPNPSPSPTVQRQRNIRDESDDAALNKLKQHIMEMI 131 Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 V + +L + T G+ I I+DQ+N PMF +S+ P +L+++G L Sbjct: 132 ESNPVMNQFKHQLLIDMTSEGLRIQIVDQQNRPMFANASAEVQPYMRTILRELGSALNDV 191 Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 IS+ GHTDA+ + NW LS DRA ++ + L+ G+ ++++++ G Sbjct: 192 PNPISLSGHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVPL 251 Query: 322 IASDPMNSANRRIDILVEDRQ 342 +D N NRRI I+V + + Sbjct: 252 DKTDAFNPINRRISIVVLNNR 272 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 53/117 (45%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + + I+ ++ ++ G+WKI YADF+T +MAFFL+MW++++ ++E Y Sbjct: 3 KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 F K + G D+ + + S K ++ +V + ++ Sbjct: 63 FRTPLKVALFGGAGSGDQSSILQGSPAIKQNMPQPNPSPSPTVQRQRNIRDESDDAA 119 >gi|163786812|ref|ZP_02181260.1| OmpA domain protein [Flavobacteriales bacterium ALC-1] gi|159878672|gb|EDP72728.1| OmpA domain protein [Flavobacteriales bacterium ALC-1] Length = 465 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 85/269 (31%), Gaps = 23/269 (8%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + G+ P+ + D D T + ++ + Sbjct: 217 DACPEEAGLEIFNGCPDSDNDGIQDSKDDCPNTAGLAEFNGCPDGDGDGVMDKDDKCPTV 276 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + + C ++ G D C + + N L Sbjct: 277 AGLKNLMGCPDADGDGVADGSDNCPNESGPAANNGCPWPDTDGDGI-----------LDK 325 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 K + G+ A+N V ++ ++ + +FD + ET VLQ Sbjct: 326 DDKCPNEA--GVAANNGCPEVK---PTAEVVETLNTYARSILFDTGKASFKKETDQVLQA 380 Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + + + SI GHTD+ N LS RA + L+ +G+S DR++ Sbjct: 381 MVAIFKEYPKADFSIEGHTDSV---GSKSTNQALSDRRANAVRDYLIANGISADRLTAA- 436 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVED 340 G+ + NRR+++ +++ Sbjct: 437 GYGEDNPIANNKTRAGRKENRRVEVKLKN 465 >gi|168334555|ref|ZP_02692711.1| flagellar motor protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 251 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 11/172 (6%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 P +++ A K+ ++ L ++ + V E ++++ D + Sbjct: 81 PEEEDRKAAENIKQITIEMENIKEELDKFLKSEGLDNKVTVEQDGEEVVLTFED---FML 137 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI---RGHTDASPFRN-IARDNWRLSLDRA 292 FD ++ P+ + VL KIG + E I GHTD P + I NW LS RA Sbjct: 138 FDSGLAVIKPDGLEVLGKIGNEIKQYLEDDYIARAEGHTDNLPINSLIFPSNWELSASRA 197 Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 S + L+ G+S RIS GF +D + NRR++I + Sbjct: 198 ISVAKYLINDIGISPMRISA-EGFGEFYPIATNDTPEGRAQNRRVEIKIAKD 248 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 47/129 (36%), Gaps = 2/129 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK ++ P +W ++D MT+L+ FF++++ +++ D A ++ + Sbjct: 3 KKKKEEEAPAGAPAWMATFSDLMTLLLCFFVLLFSMSSLDIAKFTAFINSYSGSTGIIDG 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + N + D +N + I N K++ + + + Sbjct: 63 GE--VLLNSNGMLGGGVENVPEEEDRKAAENIKQITIEMENIKEELDKFLKSEGLDNKVT 120 Query: 139 QSEHCKNSL 147 + + + Sbjct: 121 VEQDGEEVV 129 >gi|83647833|ref|YP_436268.1| flagellar motor protein MotD [Hahella chejuensis KCTC 2396] gi|83635876|gb|ABC31843.1| Flagellar motor protein [Hahella chejuensis KCTC 2396] Length = 260 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 10/188 (5%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + + + + P + + +RL+++A + + L GL+ + V Sbjct: 71 QQTAAPPQSDAPAIQPFNSPEDPAGETSEEQAGERLREIANRFNYRLKGLIGQGM---VS 127 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 I +S+ RN +F+ ++P+ ++ I +L I + G TD P Sbjct: 128 INENDNWIELSL---RNNLLFNSGDAVPVDAAFNLIDGIAGILKDYPNAILVEGFTDNVP 184 Query: 277 FRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333 R+ A NW LS R+ + ++L+ GV R++ + G+ ++ +D NRR Sbjct: 185 IRSSAYPSNWELSSARSAAVARLLIIGGVDPRRLAAV-GYGEYQPVARNDTSEGRQRNRR 243 Query: 334 IDILVEDR 341 + +LV Sbjct: 244 VVLLVAKD 251 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 41/105 (39%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 ++K+ + +N W + YADF+T+L AFF+VM+ +++ ++ K + + Sbjct: 1 MRKRRRNREESHNHERWLVSYADFITLLFAFFVVMYSVSSVNEGKYKVLSETLEGVFNAT 60 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 + I Q + + + + ++ Sbjct: 61 QRSVNPIQVGQQTAAPPQSDAPAIQPFNSPEDPAGETSEEQAGER 105 >gi|323706054|ref|ZP_08117624.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323534668|gb|EGB24449.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 241 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 11/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 +A ++ + N+ V ++ G +IS+ D +FD S+ P+ L Sbjct: 87 NSIASQLDKLIKQY---NLQNMVTYKVDERGFVISLNDTL---LFDTGSADVKPDQKETL 140 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 KIG +L I + G+TD P N NW LS+ RA + ++L+ + +IS Sbjct: 141 IKIGNILKSMPNYIRVEGYTDNVPINNNQFHSNWELSVIRATNVVEILVNDVKMDPAKIS 200 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVED 340 + G+ +R + +D NRR+DI++ + Sbjct: 201 AV-GYGEYRPIVPNDSDKNRQLNRRVDIVIMN 231 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 24/55 (43%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 + + N W + Y+D +T+LM FF+V++ I+ + + I Sbjct: 3 RHEEDEGKKENSERWLLTYSDMITLLMIFFIVLYTISTVNSQKFQQIAASLGKTF 57 >gi|292493578|ref|YP_003529017.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4] gi|291582173|gb|ADE16630.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4] Length = 279 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 83/229 (36%), Gaps = 10/229 (4%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 S+ + +Y+ L ++ + + + +I Sbjct: 38 SSVNEGKYRVLSESLTAIFPQASRRIEPIEVGGPGVVSGSSPIEIEALPAIPSSAQTLGI 97 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + +++ TL L+ +++ V + + + I D+ + Sbjct: 98 SFPSAATQEHSAMTSLKAITEEVRITLQPLIDEDL---VRLRQGQEWLEVEINDR---VL 151 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295 F S+ E + VL+K+ ++L I + G TD P NW LS RA S Sbjct: 152 FTSGSAKLEAEAVPVLKKLAKILRRFPNPIQVEGFTDNVPISTAVFPSNWELSSARAASV 211 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 + + GVS R++ I G+ +R + NRR+ +++ R Sbjct: 212 VHLFDRFGVSPARMAAI-GYGQYRPVADNSTPEGRRRNRRVALVILGRP 259 >gi|291519587|emb|CBK74808.1| Flagellar motor protein [Butyrivibrio fibrisolvens 16/4] Length = 313 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 110/325 (33%), Gaps = 35/325 (10%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK ++ P +W ++D M +L+ FF++++ +++TD + + + + Sbjct: 3 KKQKQEEAPAGSPAWMATFSDLMNLLLCFFVLLFSMSSTDTEKFQEVIASIQSSFSIFSS 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 I + Q S + + + + Q Sbjct: 63 GGTSIGEGQMISSGIS--------------------------QLEMFDDYFKSVHDGDDQ 96 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + E + T++ + + T+ ++ + + +S + + + Sbjct: 97 KYEKEGATDTQNEGEQSEDGNQTEEGQNPSDVSSESGEDISVAEAKEALEEAGASESENI 156 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 L + V + ++I+I +F+ +I + + ++ + + Sbjct: 157 AEEIEEKLALYGLQDQVEVDFNANYVMITIN---GALLFNSGKAILTEDALEIVDNLSNI 213 Query: 259 LAHS-TEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315 LA +I I GHTD P +N LS+ RA + + ++ I G Sbjct: 214 LASYNQNIIEIEGHTDNVPMSSGTYENNDVLSMYRALYVADRIREKTNLNPAYIKSA-GR 272 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 + + + NRR++I + Sbjct: 273 GEYVPIADNSTAEGRARNRRVEIKI 297 >gi|254519411|ref|ZP_05131467.1| chemotaxis motB protein [Clostridium sp. 7_2_43FAA] gi|226913160|gb|EEH98361.1| chemotaxis motB protein [Clostridium sp. 7_2_43FAA] Length = 246 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 82/210 (39%), Gaps = 8/210 (3%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S + + + + + + N +P + E ++ + L + Sbjct: 37 SMATVDAEKTKSISNAFTSMMSGQNGDSIMEYNMYNGEVPLIGGETEDNIEGGESLTEQE 96 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 K + + +N+ V + G++I + D +F+ SSS E+ VL KI Sbjct: 97 KMYKNVKEFVNENNLGSVVDIIDNKRGVIIQLRDN---VLFETSSSDLREESKEVLNKIN 153 Query: 257 EVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314 ++A I + GHTD P NW LS DRA + + ++ G R S G Sbjct: 154 SLIASIDNQILVEGHTDNRPINTSRFPSNWELSADRAVNVVKYFIEVMGQDPSRFSAA-G 212 Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDRQ 342 + + +D + NRR+DIL+ + Sbjct: 213 YGEYHPVAPNDTYENMAKNRRVDILIVTTE 242 Score = 39.6 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 2/94 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K W YAD +T+L+ FF++++ + D + K+I F Sbjct: 3 RKKKNKAEGLRGDEWMATYADTVTLLLTFFVLLYSMATVDAEKTKSISNAFTSMMSGQNG 62 Query: 79 ASKGIFDEQNP--PERSSQNKIDLSIDEHITKNS 110 S ++ N P + + ++ E +T+ Sbjct: 63 DSIMEYNMYNGEVPLIGGETEDNIEGGESLTEQE 96 >gi|268590004|ref|ZP_06124225.1| chemotaxis MotB protein [Providencia rettgeri DSM 1131] gi|291314723|gb|EFE55176.1| chemotaxis MotB protein [Providencia rettgeri DSM 1131] Length = 305 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 2/154 (1%) Query: 191 RLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 R + L + + + + + +L + G+ I I+D N PMF S+ P Sbjct: 112 RFEKLKESLEQAILKDPRLNELKPHLLIDMINDGLRIQIVDSENRPMFKVGSATVEPYMR 171 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ I +L ISI GHTD + NW LS DRA ++ + L++ G+ E++ Sbjct: 172 DILRAIAPLLNDVPNRISISGHTDDLAYANGANYSNWELSSDRANASRRELIRGGMDENK 231 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ G A D NRRI I+V + + Sbjct: 232 VLRVVGMASAIHLDKEDGFAPINRRISIIVLNDE 265 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 1/101 (0%) Query: 12 DQFIIIK-KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +I+ KK + + GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 4 NTPHVIRVKKRSSHHQNGHGGSWKIAYADFMTAMMAFFLVMWLISISSPQELTQIAEYFR 63 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111 + D NP ++ I D N++ Sbjct: 64 TPLSTAINPGSKSGDATNPIPGGGKDPIFRDGDVMPEPNNI 104 >gi|45600818|gb|AAS70302.1| motility protein B [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 266 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 11/239 (4%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 TK+S K +KQ ++ + I L + E ++ + + K +DLE Sbjct: 35 TKSSNKEKELIDENEKQSKKFRDLIDGLKEDLERERENCQKKTEALQKEYERKISDLESR 94 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 I + +SK K L+ +KK L L+ + + + L + + + ++I Sbjct: 95 ILVLNDE----ISKLKHLSENQKKELDRLSDQANELENKLTDEIKKGQIRLKRFHDRLVI 150 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD-N 284 +I D+ FD S+ + + L KI E+L + +I I GHTD P R N Sbjct: 151 NIDDK---ISFDSGSADLKKQILPALDKIKEILGNYPGNLIIIEGHTDNVPIRTKKFSDN 207 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 W+LS +RA S ++S + + R ++G+ + +++D + NRR+DI+V R Sbjct: 208 WQLSGERALSVLHYFLESKILDPRNFSLAGYGEFQPIVSNDTPENRALNRRVDIVVVPR 266 >gi|17549629|ref|NP_522969.1| flagellar motor protein MotB [Ralstonia solanacearum GMI1000] gi|17431883|emb|CAD18561.1| probable chemotaxis (motility protein b) transmembrane [Ralstonia solanacearum GMI1000] Length = 314 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 2/194 (1%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVAD 209 + + + + I L L + I + V + Sbjct: 79 DQSSILQGSPAIKQNMPQPNPSPSQTVQRQRNIRDESDDAALNKLKQHIMEMIESNPVMN 138 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 +L + T G+ I I+DQ+N PMF +S+ P +L+++G L IS+ Sbjct: 139 QFKHQLLIDMTSEGLRIQIVDQQNRPMFANASAEVQPYMRTILRELGVALNDVPNPISLS 198 Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 GHTDA+ + NW LS DRA ++ + L+ G+ ++++++ G +D N Sbjct: 199 GHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVPLDKTDAFN 258 Query: 329 SANRRIDILVEDRQ 342 NRRI I+V + + Sbjct: 259 PINRRISIVVLNNR 272 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 53/117 (45%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + + I+ ++ ++ G+WKI YADF+T +MAFFL+MW++++ ++E Y Sbjct: 3 KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 F K + G D+ + + S K ++ +V + ++ Sbjct: 63 FRTPLKVALFGGAGSGDQSSILQGSPAIKQNMPQPNPSPSQTVQRQRNIRDESDDAA 119 >gi|188586029|ref|YP_001917574.1| OmpA/MotB domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350716|gb|ACB84986.1| OmpA/MotB domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 269 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 11/183 (6%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + I +E+ P E+ + + ++ ++D+ ++ + ++ + V+ ET Sbjct: 68 PEHRAQIPREDPNITLPEPSERQVPSEEEQMMEDIYDQLEDYIEDA---DLAEVVMLETE 124 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280 GI+I D+ +FD + E++ +L I E+L I + G TD P Sbjct: 125 ERGIVIRFQDK---ILFDSGRAELRSESLEILGDIAEILEEIPNEIKVEGFTDDVPIDTP 181 Query: 281 AR-DNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 NW LS RA + + L + G+ R+ +G+ +R + +D NRR+DI Sbjct: 182 EFPSNWELSAARATTVLRYLSEEGGLDPGRLQA-TGYGEYRPMVPNDSPENRQLNRRVDI 240 Query: 337 LVE 339 V Sbjct: 241 TVL 243 >gi|312877226|ref|ZP_07737195.1| OmpA/MotB domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796035|gb|EFR12395.1| OmpA/MotB domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 257 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 13/167 (7%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 K M ++ + D+ K+I + + VL G+ I + D +FD Sbjct: 89 GATKNKQMTEEELINDIQKQILGLIKEHGIEG---KVLVIQEERGLSILLKD----VLFD 141 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAY 296 S+ P+ V+ +I ++L I GHTD P N NW LS RA S Sbjct: 142 TGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTARATSVL 201 Query: 297 QV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 Q L S V +R + G+ +R ++ + NRR+ I++ Sbjct: 202 QEILRVSKVRPERF-SVVGYGEYRPIASNKTPEGRALNRRVTIVILR 247 >gi|89889933|ref|ZP_01201444.1| putative outer membrane protein, ompA family [Flavobacteria bacterium BBFL7] gi|89518206|gb|EAS20862.1| putative outer membrane protein, ompA family [Flavobacteria bacterium BBFL7] Length = 457 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 82/272 (30%), Gaps = 25/272 (9%) Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS-TNQKKQYQRLENNIF 132 K+ + G+ P+ D + + T+ + +N + Sbjct: 206 KDACPSVAGLEQFMGCPDSDGDGIEDSKDNCPNAAGPAESMGCPDTDGDGTLDKDDNCVN 265 Query: 133 YLSNSQQSEHCKNSLTRDSE-KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + D KD CK+ S N + Sbjct: 266 EAGPAYNNGCPDPDTDGDGVVDSKDNCKTVKGPASNNGCPADRDNDGVIDADDKCPDTPG 325 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + LA + + T +FD + E+ V Sbjct: 326 IASLAGCPKPAAPTVEEQE----------------QLNQYAKTILFDTGKATIKAESAKV 369 Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L I +L SI GHTD+ A+ N RLS RA L+ +G+ E R+S Sbjct: 370 LSDITAILKKYPTAKFSIDGHTDSV---GSAKLNQRLSDSRANEVKNYLVANGIDEFRLS 426 Query: 311 KISGFAHHRLKIAS--DPMNSANRRIDILVED 340 + G+ R + + NRR++I + + Sbjct: 427 SV-GYGEARPVADNKTKTGRAQNRRVEINLVN 457 >gi|90422320|ref|YP_530690.1| hypothetical protein RPC_0800 [Rhodopseudomonas palustris BisB18] gi|90104334|gb|ABD86371.1| OmpA/MotB [Rhodopseudomonas palustris BisB18] Length = 341 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 97/338 (28%), Gaps = 16/338 (4%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + D N + + + L++ FLV+ + + K Q N Sbjct: 5 RGRRNDPGFNYWPGFVDALSTLVLAIVFLLSVFLVVQFFLSQEVTGKDKALQELNAKLAQ 64 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 L + E ++ + + Sbjct: 65 LNDLLSLEKLGKLNLEDQLSQLRAGLASSESERDRIKGLYDGLAGAGNDAAGRAGELNKA 124 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + +L + + + ++ + + + +RL Sbjct: 125 LDSEKQLSARALAQVEVLNQQISALRRQLAALEAALDASEQRGKESQSRIADLGQRLNVA 184 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + LS ++ + R I I + FD + PE L Sbjct: 185 LAQRVQELSRYRSEFFGRLRAILGNRPDIRIVGDRFVFESEVFFDTGQAQLKPEGRAELD 244 Query: 254 KIGEVL--------AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 K+ L A V+ + GHTD P + NW LS RA S Q L+ GV Sbjct: 245 KLASALIDLDKKIPAEIAWVLRVDGHTDVRPITGAFKSNWELSSGRAISVVQYLVSLGVP 304 Query: 306 EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 R+ GF + + + NRRI++ + +R Sbjct: 305 PQRLVAA-GFGEFQPLDVAATEEAYKRNRRIELKLTER 341 >gi|325286152|ref|YP_004261942.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324321606|gb|ADY29071.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 452 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 82/280 (29%), Gaps = 16/280 (5%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F + G+ + + D + + Sbjct: 173 FEDYSVKHFQHLAGLAIKFGGADTDGDGVYDKDDACPEVAGLEAFNGCPDADGDGIEDSK 232 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + S++ C ++ D C + ++N + ++ + Sbjct: 233 DACPNEAGSKEMNGCPDADGDGIADKDDACPNEAGTAALNGCPDADGDGVADKDDKCPSE 292 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLF---------ETTRTGILISIIDQRNTPMFDK 239 + V D K + + D T +FD Sbjct: 293 AGPAANNGCPWEDKDKDGVLDKDDKCPEVAGTVANNGCPEVTEEVQKKLNDYARTILFDT 352 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S E+ V+ I +L ++ GHTD+ A N +LS RA S + Sbjct: 353 GKSSIKAESTAVMVDIITILKEYPNAKFTVEGHTDSV---GSATLNQKLSESRALSVKEF 409 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L++ G+ E R+S + G+ + + NRR++I Sbjct: 410 LVEKGIGEFRLSAV-GYGEDKPIATNKTRAGRKQNRRVEI 448 >gi|330960099|gb|EGH60359.1| flagellar motor protein MotB [Pseudomonas syringae pv. maculicola str. ES4326] Length = 341 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 112/335 (33%), Gaps = 65/335 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S T + G + + Sbjct: 36 MAFFLVLWLMSS------------------------ATPEQLLAIAGYFKDPVGFSDSGS 71 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 +L + + + + + E + Sbjct: 72 PYVIDLGGSPEMSPNQTLNPEVKTTPSP-------------DTVPIEAETSETKAEAVEQ 118 Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYF 178 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 179 EDILLALADTIKSVPNKISISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDS 238 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 239 QVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273 >gi|300853354|ref|YP_003778338.1| putative flagellar motor protein MotB [Clostridium ljungdahlii DSM 13528] gi|300433469|gb|ADK13236.1| predicted flagellar motor protein MotB [Clostridium ljungdahlii DSM 13528] Length = 283 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 8/174 (4%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + ++ + K L + S L A+ + + V + G+++S+ Sbjct: 77 KTVDKPTESDQSEEQVKMEANKLKQLKKQVDSYLAANGLSQSVSSQIDERGLVVSL---S 133 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDR 291 NT FD + PE L IG+++ I + GHTD P N NW+LS R Sbjct: 134 NTLFFDTGKAEIKPEIQNTLMGIGKMINQMGNSIRVEGHTDNVPISNNEYASNWQLSCAR 193 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 A + Q L G+ ++++ + G+ +R + + NRR+DI++E + Sbjct: 194 AANVTQFLQNKVGIKPEKLTSV-GYGEYRSVTDNSTDANRAKNRRVDIIIESNK 246 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 34/94 (36%), Gaps = 4/94 (4%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +KKK D + W + YADFMT+LM FF+VM+ ++ D + Q Sbjct: 1 MKKKNKKPDEGPSAERWMLSYADFMTLLMIFFVVMYAMSQVDQTKYNKLSQSL----SIA 56 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110 M K I N K E Sbjct: 57 MGGGKTIIGADNTSSVKDSVKTVDKPTESDQSEE 90 >gi|237798269|ref|ZP_04586730.1| flagellar motor protein MotB [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021121|gb|EGI01178.1| flagellar motor protein MotB [Pseudomonas syringae pv. oryzae str. 1_6] Length = 346 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 112/335 (33%), Gaps = 65/335 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S T + G + + Sbjct: 36 MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 +L + + + + + E + Sbjct: 72 PYVIDLGGSPEMSPNQTLNPEVQTTPSP-------------DTVPIEAETSETKAEAVEQ 118 Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYF 178 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + + + +SI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 179 EDILLALADTIKSVPNKVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDA 238 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 239 QVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273 >gi|220932514|ref|YP_002509422.1| OmpA/MotB domain protein [Halothermothrix orenii H 168] gi|219993824|gb|ACL70427.1| OmpA/MotB domain protein [Halothermothrix orenii H 168] Length = 245 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 8/152 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 Q K + + + + V E T+ G+++ + ++D + P +L Sbjct: 88 QVFEKVMGQINRYVEKEKLSDRVKMELTKRGLVVRLT---GQVLYDIGKAEIKPGGKRLL 144 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 +I ++ I++ GHTD P N NW LS RA + + ++ G+ R+S Sbjct: 145 DEIAGIIEKIPNEIAVEGHTDNWPIHNEQFPSNWELSTTRATNVIKYFIERHGIDPSRLS 204 Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVED 340 G++ +R +D + + NRR++I++ + Sbjct: 205 AA-GYSEYRPLYPNDTVEHRAKNRRVEIVILN 235 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 1/83 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK ++ N W + Y D MT+L+ FF+ ++ + + + + +M Sbjct: 5 KKDLEEENKNTSPGWMVTYGDMMTLLLVFFVFLYSFSVMNVEKFEGFISALQ-AKLGVMP 63 Query: 79 ASKGIFDEQNPPERSSQNKIDLS 101 K I DE+ S N+ + S Sbjct: 64 GGKTIMDEELLSRGSIGNRFNPS 86 >gi|299069796|emb|CBJ41076.1| Chemotaxis protein motB (Motility protein B), flagellar motor protein [Ralstonia solanacearum CMR15] Length = 314 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 2/194 (1%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVAD 209 + + + + I L L + I + V + Sbjct: 79 DQSSILQGSPAIKQNMPQPNPSPSQTVQRQRNIRDESDDAALNKLKQHIMEMIESNPVMN 138 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 +L + T G+ I I+DQ+N PMF +S+ P +L+++G L IS+ Sbjct: 139 QFKHQLLIDMTSEGLRIQIVDQQNRPMFANASAEVQPYMRTILRELGVALNDVPNPISLS 198 Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 GHTDA+ + NW LS DRA ++ + L+ G+ ++++++ G +D N Sbjct: 199 GHTDATQYATQNGYSNWELSADRANASRRELIAGGMQPEKVARVVGLEASVPLDKTDAFN 258 Query: 329 SANRRIDILVEDRQ 342 NRRI I+V + + Sbjct: 259 PINRRISIVVLNNR 272 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 53/117 (45%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + + I+ ++ ++ G+WKI YADF+T +MAFFL+MW++++ ++E Y Sbjct: 3 KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 F K + G D+ + + S K ++ +V + ++ Sbjct: 63 FRTPLKVALFGGAGSGDQSSILQGSPAIKQNMPQPNPSPSQTVQRQRNIRDESDDAA 119 >gi|187478167|ref|YP_786191.1| flagellar motor protein MotB [Bordetella avium 197N] gi|115422753|emb|CAJ49281.1| chemotaxis protein [Bordetella avium 197N] Length = 324 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 3/195 (1%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL-SGLVAD 209 +E +D +S + + + + + RL+ L +++ + + + V Sbjct: 78 AETSAIPGGGSDPLRSKGEVRRADGNRVEAQPDADRRDRHRLESLKRRLEAVIDNSPVLK 137 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 N +L + T G+ I I+D +N PMF S+ P +L+++G VL +SI Sbjct: 138 NFRPQLLIDLTTEGLRIQIVDSQNRPMFATGSAQVQPYMRDILRELGPVLNDLPNKVSIS 197 Query: 270 GHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 GHTDA+ + R A NW LS DRA ++ Q L+ G++E ++ +I G A + DP Sbjct: 198 GHTDATQYARRERAYSNWELSTDRANASRQELVAGGMTEGKVMRIQGLASSMSIVKDDPY 257 Query: 328 NSANRRIDILVEDRQ 342 + NRRI ++V + + Sbjct: 258 AAVNRRISLVVLNEK 272 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 49/110 (44%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 ++ ++ ++ GSWKI YADF+T +MAFFLVMW+++ + K I YF + Sbjct: 9 VVVRRKRSSAKAHHGGSWKIAYADFITAMMAFFLVMWLVSIVPREELKGIADYFRMPLRV 68 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 +T E + + + + + +++ +++ Sbjct: 69 ALTGGPNSSAETSAIPGGGSDPLRSKGEVRRADGNRVEAQPDADRRDRHR 118 >gi|116253762|ref|YP_769600.1| hypothetical protein RL4023 [Rhizobium leguminosarum bv. viciae 3841] gi|115258410|emb|CAK09513.1| putative chemotaxis protein [Rhizobium leguminosarum bv. viciae 3841] Length = 343 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 99/315 (31%), Gaps = 15/315 (4%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 + L+ F+V I + + + + N L + S N Sbjct: 30 IMFLLTVFVVGQFILSREITGRDEVLSRLNSQINELTQLLALEKGSNQDLQDSVANLQAS 89 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 ++ + + + + + + +Q + + +L++ + + Sbjct: 90 LASAEGDRSRLQALLNAGSGGQDAAQKRIGSMTQELDEQKQVSERALSQVELLNQQIAAL 149 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 ++ + RL L+ +D + + Sbjct: 150 RRQIAAVEAALQASEEKDRVSQTKIADLGSRLNVALAARVQELNRYRSDFFGRLREILSD 209 Query: 221 RTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRG 270 R I I ++ +F + PE + K+ L V+ + G Sbjct: 210 RENIRIVGDRFVFQSEVLFPSGGADLNPEGQTEMAKLAAALLDLAKEIPPEINWVLRVDG 269 Query: 271 HTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 HTD P RDNW LS RA S + L+ GV DR+ GF + D + Sbjct: 270 HTDNVPLGGTGRYRDNWELSSARAISVVKFLIAQGVPADRLVAA-GFGEFQPIAPGDTPD 328 Query: 329 SA--NRRIDILVEDR 341 + NRRI++ + ++ Sbjct: 329 ARSTNRRIELKLTEK 343 >gi|254438344|ref|ZP_05051838.1| hypothetical protein OA307_3214 [Octadecabacter antarcticus 307] gi|198253790|gb|EDY78104.1| hypothetical protein OA307_3214 [Octadecabacter antarcticus 307] Length = 275 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 66/333 (19%), Positives = 119/333 (35%), Gaps = 65/333 (19%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 ++ N IIIK+K I ++ G+WK+ YADF+T +MAFF +M + + ++ Sbjct: 5 DKANAPVIIIKRKKVIAGGGHHGGAWKVAYADFVTAMMAFF-LMMWLLNATTEQQR---- 59 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 KG+ D P S+ T Sbjct: 60 -------------KGLADYFAPTITVSRVSGGGEGMFGGT-------------------- 86 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 N + + Q + D + ++E + Sbjct: 87 -NMMSDDALVQDGTGQSGGVPIDGDLV-----------------------GTQESAAEVA 122 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + ++ L I LV ++ V+ T G++I + + + P+F S+ P P Sbjct: 123 ALQEVEALLLGIGG--ESLVQQEALRHVVTRVTDEGLIIEVFARDDAPLFISESTEPAPV 180 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 I + T ++I GHT P R W +S RA + ++L G+ Sbjct: 181 LIELTTMFARTFDLVTNPVAIEGHTRTRPLVIAERPVWDISTGRAETVRRLLEAGGLDSL 240 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVED 340 RI++I+G A + ++ N RI+I++ Sbjct: 241 RIARITGNADRD-LARVEALSVRNNRIEIILLR 272 >gi|126417355|gb|ABO13880.1| MotB [Ralstonia solanacearum] Length = 314 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 3/201 (1%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI-LAMKRKKRLQDLAKKISSTL 203 ++ L S +++++ + P + +++ L L + I + Sbjct: 72 FGGAGSGDQSSILQGSPAIKQNMPQPNPSPSPTVQRQRNIRDESDDAALNKLKQHIMEMI 131 Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 V + +L + T G+ I I+DQ+N PMF +S+ P +L+++G L Sbjct: 132 ESNPVMNQFKHQLLIDMTSEGLRIQIVDQQNRPMFANASAEVQPYLRTILRELGAALNDV 191 Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 IS+ GHTDA+ + NW LS DRA ++ + L+ G+ ++++++ G Sbjct: 192 PNPISLSGHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVPL 251 Query: 322 IASDPMNSANRRIDILVEDRQ 342 +D N NRRI I+V + + Sbjct: 252 DKTDAFNPINRRISIVVLNNR 272 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 53/117 (45%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + + I+ ++ ++ G+WKI YADF+T +MAFFL+MW++++ ++E Y Sbjct: 3 KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 F K + G D+ + + S K ++ +V + ++ Sbjct: 63 FRTPLKVALFGGAGSGDQSSILQGSPAIKQNMPQPNPSPSPTVQRQRNIRDESDDAA 119 >gi|71906384|ref|YP_283971.1| flagellar motor protein MotD [Dechloromonas aromatica RCB] gi|71846005|gb|AAZ45501.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 257 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 7/165 (4%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 +K+ K+ ++ Q + + L V T G+ I I D +F Sbjct: 86 DKLPDQKKIEQRQKMKNMAGDIMQALQPLVAQGKVRLLETSRGVTIEINDS---ILFPAG 142 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL 299 + +I + I +VLA S I+I GHTD P NW LS RA + ++ Sbjct: 143 QAKLQSASISAMLAIAQVLAASDFPITIEGHTDNVPIATAQFPSNWELSAMRATTVLRLF 202 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 GV +R++ I G+ R + + NRR+ IL++ + Sbjct: 203 NDGGVGAERLTAI-GYGETRPLETNTTVEGRARNRRVSILIDSNR 246 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 48/150 (32%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W + YADF+T+L AFF+VM+ I++ ++ K + KN+ G Sbjct: 16 WLVSYADFITLLFAFFVVMYAISSVNEGKYKVLSNSLTNAFKNVTGQPGGQPIAVIQGAP 75 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 + D+ + ++ + N + + + E + ++ Sbjct: 76 PIPPRPIAKPDKLPDQKKIEQRQKMKNMAGDIMQALQPLVAQGKVRLLETSRGVTIEIND 135 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 L+ + L+ Sbjct: 136 SILFPAGQAKLQSASISAMLAIAQVLAASD 165 >gi|330978961|gb|EGH78020.1| flagellar motor protein MotB [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 346 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 112/335 (33%), Gaps = 65/335 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S T + G + + Sbjct: 36 MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 +L + + + + + E + Sbjct: 72 PYVIDLGGSPEMSPNQTLNPEVQTTPSP-------------DTVPIEAENAETKAEAVEQ 118 Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 119 ERLEMLLQELQNKVQENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYF 178 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + + + +SI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 179 EDILLALADTIKSVPNKVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDS 238 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 239 QVARVVGYASSALYDHQNPTNPINRRIDIVVLTKK 273 >gi|78221681|ref|YP_383428.1| OmpA/MotB [Geobacter metallireducens GS-15] gi|78192936|gb|ABB30703.1| OmpA/MotB [Geobacter metallireducens GS-15] Length = 267 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 8/207 (3%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 E + + S + STD+ + S+ + + + + +D + Sbjct: 54 ESFGFTTIQGSAAKPVVIDSTDMRIIPTITPDLINKGRSQGQKMGGRARAEEKDFRAIKA 113 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + LV V T+ G+++S+ + FD S+I +L K+ E LA Sbjct: 114 AMEAYLVKQGAQAKVSVGITQRGLVVSLKEA---GFFDSGSAIVRESAYPLLAKVAESLA 170 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 + + + GHTD P + NW LS RA + L K IS GF + Sbjct: 171 GYSNAVRVEGHTDTMPISSPLFPSNWELSTARATNIVHFLTKSYDFQPSAISAA-GFGEY 229 Query: 319 RLKIASDPMNSA--NRRIDILVEDRQG 343 R + NRR+DI++ +G Sbjct: 230 RPIADNATAEGRSKNRRVDIVLLSGEG 256 >gi|121533429|ref|ZP_01665257.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1] gi|121307988|gb|EAX48902.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1] Length = 262 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 79/193 (40%), Gaps = 11/193 (5%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + + K + M +L +L K++ ++ N+ Sbjct: 69 TVPYAAEGPPQMPILPKTPPVVSSMSGTNEHAYMMETVQLIELKKQLDRYIAES---NLA 125 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 + T G++I I D +F + PE++ + +I ++A ++ + + GHT Sbjct: 126 GDIQTALTDDGLMIRIKDT---ALFASGRAELKPESLRLGTEIARMIAPLSQRVIVAGHT 182 Query: 273 DASPFRNIAR-DNWRLSLDRAYS-AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328 D P NW LS RA + +L ++ + +RI +SG+ +R ++D Sbjct: 183 DNMPINTPEFPSNWDLSTKRALNFMKYMLSQAEIKPERI-SVSGYGEYRPVASNDTEEGR 241 Query: 329 SANRRIDILVEDR 341 + NRR+++L+ Sbjct: 242 AKNRRVEVLIMRS 254 >gi|319651875|ref|ZP_08005999.1| hypothetical protein HMPREF1013_02611 [Bacillus sp. 2_A_57_CT2] gi|317396434|gb|EFV77148.1| hypothetical protein HMPREF1013_02611 [Bacillus sp. 2_A_57_CT2] Length = 246 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 8/174 (4%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P E+I +L L + + S L + + K ++ T G+++ + +Q Sbjct: 67 PAENPEQNEEIKENGDSGQLDSLDELLMEIQSFLDENGLEKVIVANRTERGVVLVLQEQ- 125 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDR 291 +F+ + + + L K+G +LA+ ++ + GHTD P NW LS R Sbjct: 126 --VLFESGDASLIDSSYSFLDKVGTLLANMPNLVKVEGHTDDRPITTYRYPSNWELSAAR 183 Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 A + + L K + R + G+ R + + NRR++I++ D + Sbjct: 184 ASTVIRYLTEKHNLDSHRFMAV-GYGETRPIVPNSGPENWEKNRRVEIIISDPK 236 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 35/87 (40%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K + + P W + ++D +T+++ FF++++ ++ D +A+ F Sbjct: 1 MKPRRRSPEPPKGSPRWMVTFSDLVTLILVFFILLFSMSQIDLMKFQALSDSFRDRQVLD 60 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSID 103 S + E +N +D Sbjct: 61 FQPSIIPAENPEQNEEIKENGDSGQLD 87 >gi|284041524|ref|YP_003391864.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684] gi|283945745|gb|ADB48489.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684] Length = 290 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 94/315 (29%), Gaps = 71/315 (22%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 W I YAD +T ++ + + + Sbjct: 22 DERWLITYADMLT-------LLLAL---------------------FIVLYSISSLNTSK 53 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 E + D + I+ ++ G + + + NI + + Sbjct: 54 FEEMKTSLRDAFSGKIISGGEGIIETGVSATRDTPTSIVPNITPPRVQIANPRDSTAAAA 113 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + +D + + + + Sbjct: 114 LAARIED------------------------------------NEFRRIKAQIDAYARTH 137 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISI 268 + V R G+++ ++ + +FD + E + +L +G +L I + Sbjct: 138 GLRDQVEAVVARRGLVVRLL--TDQVLFDSGFADLKSEGMPLLTHVGNLLVIDRIHPILV 195 Query: 269 RGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 GHTD P + NW LS RA + L+ GV R SG+A ++ Sbjct: 196 EGHTDDVPISTSRFESNWELSTARATEVVRYLIDRGVPTRRFGA-SGYADLHPLGSNGTD 254 Query: 327 -MNSANRRIDILVED 340 + NRR++++++ Sbjct: 255 RGRARNRRVEVVLQR 269 >gi|302872092|ref|YP_003840728.1| OmpA/MotB domain protein [Caldicellulosiruptor obsidiansis OB47] gi|302574951|gb|ADL42742.1| OmpA/MotB domain protein [Caldicellulosiruptor obsidiansis OB47] Length = 257 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 13/167 (7%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 K M ++ + D+ K++ + + VL G+ I + D +FD Sbjct: 89 GATKNRQMTEEELINDIQKQVLGLIKEHGIEG---KVLVIQEERGLSILLKD----VLFD 141 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAY 296 S+ P+ V+ +I ++L I GHTD P N NW LS RA S Sbjct: 142 TGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTARATSVL 201 Query: 297 QV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 Q L S V +R + G+ +R ++ + NRR+ I++ Sbjct: 202 QEILRVSKVKPERF-SVVGYGEYRPIASNKTPEGRALNRRVTIVILR 247 >gi|183221220|ref|YP_001839216.1| hypothetical protein LEPBI_I1834 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911311|ref|YP_001962866.1| endoflagellar motor protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775987|gb|ABZ94288.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779642|gb|ABZ97940.1| Putative outer membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 354 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 12/238 (5%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 ++ T++++ ++ + ++ E + K + +S E Sbjct: 111 SIEKKGTDKERTLAEENRKREEKDRAEIDSLKRKLEEKERECLQKEQKLRESYESKMDEL 170 Query: 172 NYFLPPLSKEKI----LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + L +E L ++K+ L+ L+++ L + + + ++I+ Sbjct: 171 KERIRNLEEELASLRKLTKEQKRELERLSEQTKEFEEKLAKEITSGQIRLKRFHNKLIIN 230 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 I D+ FD SS P + ++KI ++LA I + GHTD P + R+NW Sbjct: 231 IDDK---ISFDSGSSELKPAILPAIEKIRDILASYPENYIVVEGHTDNVPIKTKFRNNWH 287 Query: 287 LSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 LS +RA S + L ++ S G+ H+ + + + NRR+DI+V R Sbjct: 288 LSSERALSVLEFILQNKNLNPKNFSSA-GYGEHQPIVPNSTKENKALNRRVDIVVIPR 344 >gi|118588357|ref|ZP_01545766.1| hypothetical protein SIAM614_23787 [Stappia aggregata IAM 12614] gi|118439063|gb|EAV45695.1| hypothetical protein SIAM614_23787 [Stappia aggregata IAM 12614] Length = 321 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 106/326 (32%), Gaps = 29/326 (8%) Query: 40 FMTVLMAFFLVMWIINATDDDTK---KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96 T+L+ +++++++ + + + L + + +S Sbjct: 1 MATLLL---VIIFLLSIFMIAQFFLSQQLSGR-DTVLNRLNAQISELTELLALERANSGE 56 Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 D + + + + + + + SQ + E Sbjct: 57 LEDTILGLQASLSDAEAEQTRLLGLLENSSGAADAAGGRASQLENLLDDERQISQEALAQ 116 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + ++ ++ L + + ++ L K++++ L V + Sbjct: 117 VELLNQQIAALRRQIAAANAALEASEAKEADSQAKIASLGKRLNAALVQRVQELSRYRSD 176 Query: 217 FETTRTGILISIIDQ---------RNTPMFDKSSSIPLPETIVVLQKIGEVLAH------ 261 F IL D ++ +FD PE L K+ + + Sbjct: 177 FFGRLREILSQRSDISVVGDRFVFQSEVLFDSGQEDINPEGRQELDKLADAIQELSAQIP 236 Query: 262 --STEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTDA P R +NW LS RA S + L++ GV R+ GF Sbjct: 237 DEINWVLRVDGHTDARPLSGTGRLRNNWELSAARAISVVRYLIERGVDPKRLVAA-GFGE 295 Query: 318 HRLKIASDPMN--SANRRIDILVEDR 341 + D + NRRI++ + +R Sbjct: 296 FQPLEEGDTQEALAKNRRIELKLTER 321 >gi|302062274|ref|ZP_07253815.1| flagellar motor protein MotB [Pseudomonas syringae pv. tomato K40] Length = 341 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 112/335 (33%), Gaps = 65/335 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S T + G + + Sbjct: 36 MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 +L + + + + + E + Sbjct: 72 PYVIDLGGSPEMSPNQTLNPEVKTTPSP-------------DTVPIEAETSETKAEAVEQ 118 Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYF 178 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 179 EDILLALADTIRSVPNKISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPDS 238 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 239 QVARVVGYASSALYDRENPTNPVNRRIDIVVLTKK 273 >gi|121533623|ref|ZP_01665450.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1] gi|121307614|gb|EAX48529.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1] Length = 262 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 11/193 (5%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + K + M +L +L K++ ++ +N+ Sbjct: 69 TVPYAVDGPSQMPVLPKTPAVVSGMAGANEQAYMIETVQLVELKKQLDRYIAE---NNLA 125 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 + T G++I I D +F + PE++ + +I ++A + + + GHT Sbjct: 126 GDIQTALTDDGLMIRIKDT---ALFASGRAELKPESLRLGTEIARMIAPLPQRVIVAGHT 182 Query: 273 DASPFRNIAR-DNWRLSLDRAYS-AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328 D P NW LS RA + +L ++ + +RI +SG+ +R ++D Sbjct: 183 DNMPINTPEFPSNWDLSTVRALNFMKYMLSQAEIKPERI-SVSGYGEYRPVASNDTEEGR 241 Query: 329 SANRRIDILVEDR 341 + NRR+++L+ Sbjct: 242 AKNRRVEVLIMRS 254 >gi|190893330|ref|YP_001979872.1| outer membrane protein (OmpA protein) [Rhizobium etli CIAT 652] gi|190698609|gb|ACE92694.1| probable outer membrane protein (OmpA protein) [Rhizobium etli CIAT 652] Length = 343 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 107/345 (31%), Gaps = 29/345 (8%) Query: 18 KKKVAIDDTPNNLGSWKIVYAD-FMTVL------MAFFLVMWIINATDDDTKKAIEQYFN 70 +++ D + D T+L + F+V I + + + + N Sbjct: 7 RRRERTVDYWPG-------FVDALSTLLISIMFVLTVFVVGQFILSREITGRDEVLNRLN 59 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 L + S N + ++ + + + + + + Sbjct: 60 SQINELTQLLALEKGSNQDLQDSVANLQASLANAEGERSRLQALLSAGSGGQDAAQKRIG 119 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 +Q + + +L++ + + ++ + Sbjct: 120 AMTQELDEQKQVSERALSQVELLNQQIAALRSQIAAVEAALQASEEKDRVSQTKIADLGS 179 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPET 248 RL L+ +D + + R I I ++ +F + PE Sbjct: 180 RLNVALAARVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGADLNPEG 239 Query: 249 IVVLQKIGEVL--------AHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQV 298 + K+ L V+ + GHTD P RDNW LS RA S + Sbjct: 240 QTEMAKLATALLDLAKEIPPEINWVLRVDGHTDNVPLVGTGRYRDNWELSSARATSVVKF 299 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 L+ GV DR+ GF + D ++ NRRI++ + ++ Sbjct: 300 LIGQGVPADRLVAA-GFGEFQPIAPGDAPDARATNRRIELKLTEK 343 >gi|313672698|ref|YP_004050809.1| ompa/motb domain protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939454|gb|ADR18646.1| OmpA/MotB domain protein [Calditerrivibrio nitroreducens DSM 19672] Length = 276 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 1/193 (0%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + G + T +K+ + + +I A + + + + + + +++ Sbjct: 69 EKAGGSIMEGGTGKPFEADKKGQAQIVEKIEVEIAATATENNGEKVKESLMGVVKTQLSE 128 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 ++ TT GI I +ID+ P+F S+ VL+ + L + I I Sbjct: 129 -FSDQIMVSTTPEGIRIDVIDKTGNPIFSSGSASLNTNGKAVLKVLANTLNELSNKIVIE 187 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 GHTDA +R NW LS+ RA +A L+ +G ++IS ++G+A R + +P + Sbjct: 188 GHTDAMTYRGDKNGNWDLSIQRANNARAELLLNGYDANKISSVAGYAATRPIVKDNPNDP 247 Query: 330 ANRRIDILVEDRQ 342 NRRI L+ + Sbjct: 248 MNRRISFLILYDK 260 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 40/80 (50%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83 + ++ G+WKI YADF+T +MAFFLVMW++N T ++ + I YF F + Sbjct: 17 EGGGHHGGAWKIAYADFVTAMMAFFLVMWLLNMTSEEKRAKIAMYFRTFSIFEKAGGSIM 76 Query: 84 FDEQNPPERSSQNKIDLSID 103 P + + ++ Sbjct: 77 EGGTGKPFEADKKGQAQIVE 96 >gi|149919675|ref|ZP_01908153.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1] gi|149819446|gb|EDM78876.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1] Length = 262 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 71/223 (31%), Gaps = 7/223 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 Q + + + Q + + E+ +L + + K+ Sbjct: 30 DASQAELKKTQKELEAERQANVELEAENQTLQERIAELEAEIEQLERQIKDLAEKAGLTE 89 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 KE K + + + + L + +++ + +FD Sbjct: 90 KELAELRAEKAKREAELQVYRDLFASLKKMVDAGTIKVGFREGRLVVKL---DEGILFDS 146 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV 298 + E L ++ L + GHTD P + NW LS RA Sbjct: 147 GRAKLKKEGQAALTELIAPLRDVNRDWIVAGHTDNVPIKTAKFQSNWELSSARAVEVVTF 206 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 L+ +G+ +RI G+A + + NRRI+I++ Sbjct: 207 LIDTGMPAERIGSA-GYAEFDPVADNSSPEGRAQNRRIEIVLM 248 >gi|327188824|gb|EGE56018.1| putative outer membrane protein (OmpA protein) [Rhizobium etli CNPAF512] Length = 343 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 107/345 (31%), Gaps = 29/345 (8%) Query: 18 KKKVAIDDTPNNLGSWKIVYAD-FMTVL------MAFFLVMWIINATDDDTKKAIEQYFN 70 +++ D + D T+L + F+V I + + + + N Sbjct: 7 RRRERTVDYWPG-------FVDALSTLLISIMFVLTVFVVGQFILSREITGRDEVLNRLN 59 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 L + S N + ++ + + + + + + Sbjct: 60 SQINELTQLLALEKGSNQDLQDSVANLQASLANAEGERSRLQALLSAGSGGQDAAQKRIG 119 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 +Q + + +L++ + + ++ + Sbjct: 120 AMTQELDEQKQVSERALSQVELLNQQIAALRSQIAAVEAALQASEEKDRVSQTKIADLGS 179 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPET 248 RL L+ +D + + R I I ++ +F + PE Sbjct: 180 RLNVALAARVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGADLNPEG 239 Query: 249 IVVLQKIGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQV 298 + K+ L V+ + GHTD P RDNW LS RA S + Sbjct: 240 QTEMAKLATALLDLAKEIPPEINWVLRVDGHTDNVPLAGTGRYRDNWELSSARATSVVKF 299 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 L+ GV DR+ GF + D ++ NRRI++ + ++ Sbjct: 300 LIGQGVPADRLVAA-GFGEFQPIAPGDAPDARATNRRIELKLTEK 343 >gi|91977304|ref|YP_569963.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] gi|91683760|gb|ABE40062.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] Length = 286 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 114/324 (35%), Gaps = 60/324 (18%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + + W + +AD M +L++FF VM + +T D K I Sbjct: 13 KRKSTEEAHLGHGWFVTFADLMALLVSFF-VMLVSFSTQDLQKLQIV------------- 58 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + + + + ++ + ++ + + + N Sbjct: 59 --------------AGSMREAFGVQQDSRFAGVVETDGVPVQGKIRSKTNV--------- 95 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + D + E S K A + ++ Sbjct: 96 --------------------APDQASNTPHLEEAGGAGSSASKAKAEREFALASASLRQA 135 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L + K V+FE T G+ + + DQ PMF + S++P T +++ ++ L Sbjct: 136 LQDVPELA--EMSKNVVFEETPLGLNLELTDQEGRPMFPEGSAVPYERTRMLIARLAAPL 193 Query: 260 AHSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + +SI GHT A+P + + LS RA + QVL + G++ RI ++G Sbjct: 194 RATALRVSIVGHTAAAPVNADDEYDAFDLSTSRANAVRQVLKREGLAASRIMLVAGKGDG 253 Query: 319 RLKIASDPMNSANRRIDILVEDRQ 342 P +ANRR+ I + Sbjct: 254 EPLFPEAPTLAANRRVTISLLREN 277 >gi|148266090|ref|YP_001232796.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4] gi|146399590|gb|ABQ28223.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4] Length = 258 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 8/170 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 P + + + +D ++ + L+ ++ V E TR G+++S+ + Sbjct: 87 PPKQAQYGKTRSHAEEKDFKAIKAAIEAYLLKNDAQNKVSVEITRRGLVVSLKE---VGF 143 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295 FD S+ + +L + E +++ T I + GHTD P + NW LS RA + Sbjct: 144 FDSGSATVQQNSYGLLAHVAESVSNYTNPIRVEGHTDNVPISSHTFPSNWELSTARATNL 203 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 Q L++ D+IS +GF HR + NRR+DI++ + Sbjct: 204 VQYLIRYYEFQPDKISA-TGFGEHRPIADNSTAEGRGKNRRVDIVLLSTE 252 >gi|213967914|ref|ZP_03396060.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato T1] gi|213927257|gb|EEB60806.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato T1] Length = 341 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 112/335 (33%), Gaps = 65/335 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S T + G + + Sbjct: 36 MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 +L + + + + + E + Sbjct: 72 PYVIDLGGSPEMSPNQTLNPEVKTTPSP-------------DTVPIEAETSETKAEAVEQ 118 Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYF 178 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 179 EGILLALADTIRSVPNKISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPDS 238 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 239 QVARVVGYASSALYDRENPTNPVNRRIDIVVLTKK 273 >gi|86131069|ref|ZP_01049668.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85818480|gb|EAQ39640.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 470 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 82/271 (30%), Gaps = 25/271 (9%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 + G+ + P+ D + ++ Sbjct: 221 KDDACPEVAGLPEFDGCPDSDGDGIQDSKDACPTVAGLAEFDGCPDTDGDGIPDPKDACP 280 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ C ++ + D C + ++ N P K+ + + Sbjct: 281 TVAGIAALGGCPDADGDGIKDADDNCPNEAGPRANNGC-----PYQDKDGDGVLDKDDEC 335 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D ++G VA+N V E +L + + +FD + + E+ L Sbjct: 336 PD--------VAGTVANNGCPEVSVE-----VLNDLNVETKKVLFDYNKASIRTESYATL 382 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 K+ V+ I GHTD N LS RA S L G+ R+ Sbjct: 383 DKVASVMMEYPTTRFLIEGHTDDR---GRDAYNLDLSDQRAASVRSYLTGKGIPASRLES 439 Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVED 340 GF R ++ NRR+++ + + Sbjct: 440 -KGFGEARPVASNKTAAGRQENRRVELSILE 469 >gi|330965971|gb|EGH66231.1| flagellar motor protein MotB [Pseudomonas syringae pv. actinidiae str. M302091] Length = 341 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 112/335 (33%), Gaps = 65/335 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S T + G + + Sbjct: 36 MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 +L + + + + + E + Sbjct: 72 PYVIDLGGSPEMSPNQTLNPEVKTTPSP-------------DTVPIEAETSETKAEAVEQ 118 Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYF 178 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 179 EDILLALADTIRSVPNKISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPDS 238 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 239 QVARVVGYASSALYDHENPTNPVNRRIDIVVLTKK 273 >gi|312793260|ref|YP_004026183.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180400|gb|ADQ40570.1| OmpA/MotB domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 257 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 13/167 (7%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 K M ++ + D+ K++ + + VL G+ I + D +FD Sbjct: 89 GATKNKQMTEEELINDIQKQVLGLIKEHGIEG---KVLVIQEERGLSILLKD----VLFD 141 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAY 296 S+ P+ V+ +I ++L I GHTD P N NW LS RA S Sbjct: 142 TGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTARATSVL 201 Query: 297 QV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 Q L S V +R + G+ +R ++ + NRR+ I++ Sbjct: 202 QEILRVSKVRPERF-SVVGYGEYRPIASNKTPEGRALNRRVTIVILR 247 >gi|222529065|ref|YP_002572947.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|312622679|ref|YP_004024292.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|222455912|gb|ACM60174.1| OmpA/MotB domain protein [Caldicellulosiruptor bescii DSM 6725] gi|312203146|gb|ADQ46473.1| OmpA/MotB domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 257 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 13/167 (7%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 K M ++ + D+ K++ + + VL G+ I + D +FD Sbjct: 89 GATKNKQMTEEELINDIQKQVLGLIKEHGIEG---KVLVIQEERGLSILLKD----VLFD 141 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAY 296 S+ P+ V+ +I ++L I GHTD P N NW LS RA S Sbjct: 142 TGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTARATSVL 201 Query: 297 QV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 Q L S V +R + G+ +R ++ + NRR+ I++ Sbjct: 202 QEILRVSKVRPERF-SVVGYGEYRPIASNKTPEGRALNRRVTIVILR 247 >gi|28872066|ref|NP_794685.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato str. DC3000] gi|301384434|ref|ZP_07232852.1| flagellar motor protein MotB [Pseudomonas syringae pv. tomato Max13] gi|302132278|ref|ZP_07258268.1| flagellar motor protein MotB [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855319|gb|AAO58380.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331014600|gb|EGH94656.1| flagellar motor protein MotB [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 341 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 112/335 (33%), Gaps = 65/335 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S T + G + + Sbjct: 36 MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 +L + + + + + E + Sbjct: 72 PYVIDLGGSPEMSPNQTLNPEVKTTPSP-------------DTVPIEAETSETKAEAVEQ 118 Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYF 178 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ + Sbjct: 179 EDILLALADTIRSVPNKISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPDS 238 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G+A L +P N NRRIDI+V ++ Sbjct: 239 QVARVVGYASSALYDRENPTNPVNRRIDIVVLTKK 273 >gi|92119002|ref|YP_578731.1| hypothetical protein Nham_3542 [Nitrobacter hamburgensis X14] gi|91801896|gb|ABE64271.1| OmpA/MotB [Nitrobacter hamburgensis X14] Length = 343 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 113/346 (32%), Gaps = 31/346 (8%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + + N + + + L++ FLV+ + + K + N Sbjct: 6 RGRRNESGFNYWPGFVDALSTLVLAIVFLLSVFLVVQFFLSQEVSGKDKALEQLNTKIAQ 65 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + D + + + D S + + N Sbjct: 66 -------LTDLLSLEKLGKLSLGDEVSQLRAGLASAEAERDRVKGLYDGLAGAGNNAAGR 118 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 N+Q ++ + S + T ++ ++ L + + + R+ DL Sbjct: 119 NTQLNKALDSEKQVSSRALAQVEVLTQQISALRRQLAALEDALDASEKKDKESQNRIADL 178 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLP 246 ++++ L+ V + F IL + D R + FD + + LP Sbjct: 179 GQRLNVALAKRVQELSRYRSEFFGRLRTILGNRPDIRVVGDRFVFQSEVFFDTAQATLLP 238 Query: 247 ETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297 E L K+ L V+ + GHTD P + + NW LS RA S Q Sbjct: 239 EGKAELDKVAGALIDLDKQIPHEIAWVLRVDGHTDVRPISSPVFKSNWELSSARAISVVQ 298 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 L+ GV R+ GF + ++ NRRI++ + +R Sbjct: 299 YLVSLGVPPQRLVAA-GFGEFQPLDPGTTEDAYKRNRRIELKLTER 343 >gi|332161302|ref|YP_004297879.1| flagellar motor protein MotB [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665532|gb|ADZ42176.1| flagellar motor protein MotB [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 409 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 8/223 (3%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK-----EK 182 + S + ++ + T KS+D I + + + + Sbjct: 45 MWLLSVSSPQELTQIAEYFRTPLKVALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDS 104 Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + K + RL L +K+ + + +L G+ I IID +N PMF S Sbjct: 105 EESRKEEYRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGS 164 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299 + P +L+ I +L IS+ GHTD P+ + NW LS DRA ++ + L Sbjct: 165 AQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSNWELSADRANASRREL 224 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + G+ E ++ ++ G A + NRRI ILV ++Q Sbjct: 225 LAGGLDEGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 53/110 (48%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +N I++KK+ A ++ GSWKI YADFMT +MAFFLVMW+++ + I + Sbjct: 2 KHQNHPVILVKKRKAKHGQAHHGGSWKIAYADFMTAMMAFFLVMWLLSVSSPQELTQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 YF K +++ + D +P + + +S + + Sbjct: 62 YFRTPLKVALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDSEESRKEE 111 >gi|318605218|emb|CBY26716.1| flagellar motor rotation protein MotB [Yersinia enterocolitica subsp. palearctica Y11] Length = 409 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 8/223 (3%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK-----EK 182 + S + ++ + T KS+D I + + + + Sbjct: 45 MWLLSVSSPQELTQIAEYFRTPLKVALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDS 104 Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + K + RL L +K+ + + +L G+ I IID +N PMF S Sbjct: 105 EESRKEEYRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGS 164 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299 + P +L+ I +L IS+ GHTD P+ + NW LS DRA ++ + L Sbjct: 165 AQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSNWELSADRANASRREL 224 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + G+ E ++ ++ G A + NRRI ILV ++Q Sbjct: 225 LAGGLDEGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 53/110 (48%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +N I++KK+ A ++ GSWKI YADFMT +MAFFLVMW+++ + I + Sbjct: 2 KHQNHPVILVKKRKAKHGQAHHGGSWKIAYADFMTAMMAFFLVMWLLSVSSPQELTQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 YF K +++ + D +P + + +S + + Sbjct: 62 YFRTPLKVALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDSEESRKEE 111 >gi|197120112|ref|YP_002140539.1| chemotaxis protein MotB [Geobacter bemidjiensis Bem] gi|197089472|gb|ACH40743.1| chemotaxis MotB protein [Geobacter bemidjiensis Bem] Length = 254 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 8/166 (4%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + K + +D ++ + L+ V T G+++S+ + FD Sbjct: 87 QAPQRGKSRGGEKDFRATKAAIEAYLLKVGAQAKVSVSVTPRGLVVSLKEA---GFFDSG 143 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL 299 S+ ++ +L+ + L+ + I + GHTD P + NW LS RA + Q L Sbjct: 144 SATLKQDSYALLKDVVSSLSSYSNGIRVEGHTDNMPISSASFPSNWELSTARATNVLQYL 203 Query: 300 MKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 K RIS G+ +R + NRR+DI++ Q Sbjct: 204 TKQTDFDPYRISAA-GYGEYRPVADNSDAEGRGKNRRVDIVLLSEQ 248 >gi|312116065|ref|YP_004013661.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] gi|311221194|gb|ADP72562.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 339 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 108/345 (31%), Gaps = 33/345 (9%) Query: 20 KVAIDDTPNNLGSWKIVYADF---MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 K + + + +T LM F+V A D K Sbjct: 5 KRRRPHAVDYWPGFVDALSTLLLVVTFLMVLFMVAQYFAAQDASGKDTAL-----AKLQR 59 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 A ++ + + + E + +S + K ++ + + Sbjct: 60 QIAQMADLLSLERSQKKTAMEETSGLRETLAASSAENKRLTSLLSVDSAKSGDARVAAVT 119 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 +Q E + ++ ++ K+ L + + ++ DL Sbjct: 120 TQLDEQKSITAQALAQVELLN----QQILALRKQLAALENSLGDSDKRDKQAQAQISDLG 175 Query: 197 KKISSTLSGLVADNIVKGVLFE---------TTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++++ L+ V + F ++ ++ FD S+ P Sbjct: 176 QRLNVALAKRVQELSQYRSTFFGELKKSLGDRDDIQVVGDRFVFQSEIFFDSGSADLSPL 235 Query: 248 TIVVLQKIGEVLAH--------STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV 298 L K+G L V+ I GHTD P A NW LS RA S + Sbjct: 236 GYAELDKLGTALRDLENKIPRDINWVLRIDGHTDVRPIATAAFRSNWELSSQRAISVVKY 295 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 L+ GV +R+ GF ++ + NRRI++ + ++ Sbjct: 296 LVSKGVPPNRLVAA-GFGEYQPLTSGYTDADLRRNRRIELKLTEK 339 >gi|253996642|ref|YP_003048706.1| OmpA/MotB domain-containing protein [Methylotenera mobilis JLW8] gi|253983321|gb|ACT48179.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8] Length = 271 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 7/201 (3%) Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 S S + + K I + + + PL + + K ++ +AK Sbjct: 56 GTAFSGNGSSGVNQTSTEKGLGAKGITEANSSIVKPLPLSHLYSEKLRRERDSMAKTGVE 115 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + L + T GI I I D +F S+ P ++ +I ++ Sbjct: 116 VSNKLAPMINEGKIQVIQTSRGIRIDIQDNL---LFGAGSADLSPTANAIISEIVPLIKD 172 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + I + GHTD +P N NW LS RA S ++L G+SE R+S +G + Sbjct: 173 NQRKIQVEGHTDNTPIHNATFFSNWELSAVRASSVVRLLSALGISEQRLSA-TGLGASQP 231 Query: 321 KIASDPM--NSANRRIDILVE 339 ++ + NRR+ I++ Sbjct: 232 ISENESEAGRAKNRRVSIIIT 252 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 39/92 (42%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + +++ N W + YADF+T+L AFF+VM+ I++ + K + ++ Sbjct: 6 RKRVEEDQENHERWLVSYADFITLLFAFFVVMYSISSVEIGKYKQLTNSIGTAFSGNGSS 65 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111 + + + SI + + + + Sbjct: 66 GVNQTSTEKGLGAKGITEANSSIVKPLPLSHL 97 >gi|322421651|ref|YP_004200874.1| OmpA/MotB domain-containing protein [Geobacter sp. M18] gi|320128038|gb|ADW15598.1| OmpA/MotB domain protein [Geobacter sp. M18] Length = 254 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 8/213 (3%) Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 ++ +++E +S+ + + + + Q Sbjct: 40 QTDKKKAEEVLSSMRESFGYSTTSAGAKPTVIDSGAMSIVPSIHKMTQAPKRGRSRGSEQ 99 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 D +S + L+ V T+ G+++S+ + FD S+ + +L Sbjct: 100 DFRATKASIEAYLMKMGAQSKVSISVTQRGLVVSLKEA---GFFDSGSATLKQSSFSLLN 156 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311 + LA + + + GHTD P + NW LS RA + Q L K RIS Sbjct: 157 DVVTSLASYSNSVRVEGHTDNIPISSASFPSNWELSTARATNVLQYLTKQEDFDPARISA 216 Query: 312 ISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 G+ +R + + NRR+DI++ Q Sbjct: 217 A-GYGEYRPVADNGDEEGRGKNRRVDIVLLSEQ 248 >gi|27376621|ref|NP_768150.1| hypothetical protein bll1510 [Bradyrhizobium japonicum USDA 110] gi|27349762|dbj|BAC46775.1| flagellar motor protein [Bradyrhizobium japonicum USDA 110] Length = 342 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 94/253 (37%), Gaps = 27/253 (10%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE------KSIN 168 + +++ + + L + + N Q + + DSEK +E ++ Sbjct: 91 ASAESERDRIKGLYDGLAAAGNDAQGKSTELGKALDSEKAVSARALAQIEVLNQQISALR 150 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 ++ L + + + R+ DL +++ L+ V + F IL + Sbjct: 151 RQLAALEEALDASEKRDKESQNRIADLGSRLNVALAQRVQELSRYRSEFFGRLRAILGNR 210 Query: 229 IDQR---------NTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGH 271 D R + FD + LPE L + L A V+ + GH Sbjct: 211 PDIRVVGDRFVFQSEVFFDTGQATLLPEGRAELDTVANALIELDKKIPAEIAWVLRVDGH 270 Query: 272 TDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS- 329 TD P + NW LS RA S Q L+ GV R+ GF + ++ ++ Sbjct: 271 TDVRPVSGASFKSNWDLSAARAISVVQYLISLGVPAQRLVAA-GFGEFQPLDTANTEDAY 329 Query: 330 -ANRRIDILVEDR 341 NRRI++ + +R Sbjct: 330 KRNRRIELKLTER 342 >gi|209550830|ref|YP_002282747.1| hypothetical protein Rleg2_3254 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536586|gb|ACI56521.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 343 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 100/315 (31%), Gaps = 15/315 (4%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 + L+ F+V I + + + + N L + S N Sbjct: 30 IMFLLTVFVVGQFILSREITGRDEVLSRLNSQINELTQLLALEKGSNQDLQDSVANLQAS 89 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 ++ + + + + + + +Q++ + +L++ + + Sbjct: 90 LASAEGDRSRLQALLNAGSGGQDAAQKRIGTMTQELDEQNQVSERALSQVELLNQQIAAL 149 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 ++ + RL L+ +D + + Sbjct: 150 RSQIAAVEAALQASEEKDRVSQTKIADLGSRLNVALAARVQELNRYRSDFFGRLREILSD 209 Query: 221 RTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRG 270 R I I ++ +F + PE + K+ L V+ + G Sbjct: 210 RENIRIVGDRFVFQSEVLFPSGGADLNPEGQTEMGKLAAALLDLAKEIPPEINWVLRVDG 269 Query: 271 HTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 HTD P RDNW LS RA S + L+ GV DR+ GF + + + Sbjct: 270 HTDNVPLAGTGRYRDNWELSSARAISVVKFLIAQGVPADRLVAA-GFGEFQPIAPGETPD 328 Query: 329 SA--NRRIDILVEDR 341 + NRRI++ + ++ Sbjct: 329 ARATNRRIELKLTEK 343 >gi|312127873|ref|YP_003992747.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311777892|gb|ADQ07378.1| OmpA/MotB domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 257 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 13/164 (7%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 K M ++ + D+ K++ + + VL G+ I + D +FD S Sbjct: 92 KNKQMTEEELINDIQKQVLGLIKEHGIEG---KVLVIQEERGLSILLKD----VLFDTGS 144 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQV- 298 + P+ V+ +I ++L I GHTD P N NW LS RA S Q Sbjct: 145 AKLTPQAKGVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTARATSVLQEI 204 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L S V +R + G+ +R ++ + NRR+ I++ Sbjct: 205 LRVSKVRPERF-SVVGYGEYRPIASNKTPEGRALNRRVTIVILR 247 >gi|237756519|ref|ZP_04585048.1| chemotaxis protein MotB [Sulfurihydrogenibium yellowstonense SS-5] gi|237691319|gb|EEP60398.1| chemotaxis protein MotB [Sulfurihydrogenibium yellowstonense SS-5] Length = 264 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 10/191 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 D +K ++ S + P + + + KR+ + + +++ + L Sbjct: 41 DKKKLASFVEAISAAFSFKPISSSAPPSIIEGVGVKQKREDAKKKIKERVEQIIKKL--- 97 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 N+ V E G+ I I+D +F S+ E +L I EV+ + + + Sbjct: 98 NLEGKVSVEVIPMGVRIRILD---YILFPPCSTEINQEYKELLNGIAEVIKEAKLPVEVE 154 Query: 270 GHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 GHTD P NW LS RA + + L+ +G + G+A + ++ Sbjct: 155 GHTDDIPPGPTCIYPSNWELSASRAAAVVRYLITAGNLPPYLFSAVGYADTKPISPNNSE 214 Query: 328 NSA--NRRIDI 336 NRRI+I Sbjct: 215 LGRKLNRRIEI 225 >gi|238756396|ref|ZP_04617706.1| hypothetical protein yruck0001_10350 [Yersinia ruckeri ATCC 29473] gi|238705369|gb|EEP97776.1| hypothetical protein yruck0001_10350 [Yersinia ruckeri ATCC 29473] Length = 354 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 3/180 (1%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224 + + + K + RL L +K+ + + +L G+ Sbjct: 54 GDDPTQQQGEVRKQSQSAETKKEQARLNKLREKLEELIESDPRLKALRPHLLINMMDEGL 113 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282 I IID +N PMF S+ P +L+ I +L IS+ GHTD P+ N Sbjct: 114 RIQIIDSQNRPMFQMGSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYANGERGY 173 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 NW LS DRA ++ + L+ G++E ++ ++ G A + NRRI ILV ++Q Sbjct: 174 SNWELSADRANASRRELLSGGLAEGKVLRVVGMASTMRLKEQGADDPVNRRISILVLNKQ 233 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 36/95 (37%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 MT +MAFFLVMW+++ + I +YF K +T+ +P + Sbjct: 1 MTAMMAFFLVMWLLSISSPQELTQIAEYFRTPLKVALTSGDKSSSSSSPIPGGGDDPTQQ 60 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + S + K K ++LE I Sbjct: 61 QGEVRKQSQSAETKKEQARLNKLREKLEELIESDP 95 >gi|123442804|ref|YP_001006781.1| flagellar motor protein MotB [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089765|emb|CAL12618.1| chemotaxis MotB protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 414 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 8/223 (3%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK-----EK 182 + S + ++ + T KS+D I + + + + Sbjct: 45 MWLLSVSSPQELTQIAEYFRTPLKVALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDS 104 Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + K + RL L +K+ + + +L G+ I IID +N PMF S Sbjct: 105 EESRKEEYRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGS 164 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299 + P +L+ I +L IS+ GHTD P+ + NW LS DRA ++ + L Sbjct: 165 AQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSNWELSADRANASRREL 224 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + G+ E ++ ++ G A + NRRI ILV ++Q Sbjct: 225 LAGGLDEGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 53/110 (48%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +N I++KK+ A ++ GSWKI YADFMT +MAFFLVMW+++ + I + Sbjct: 2 KHQNHPVILVKKRKAKHGQAHHGGSWKIAYADFMTAMMAFFLVMWLLSVSSPQELTQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 YF K +++ + D +P + + +S + + Sbjct: 62 YFRTPLKVALSSGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDSEESRKEE 111 >gi|262362261|gb|ACY58982.1| chemotaxis MotB protein [Yersinia pestis D106004] Length = 276 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224 + + + + RL L +K+ + + +L G+ Sbjct: 88 GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282 I IID +N PMF S+ P +L+ I +L +S+ GHTD P+ Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 NW LS DRA ++ + L+ G+ E +I ++ G A + NRRI ILV +++ Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKR 267 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 48/107 (44%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +N I++KK+ + GSWKI YADFMT +MAFFLVMW++ + I + Sbjct: 2 KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 YF K +T+ +P + + NS + + Sbjct: 62 YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108 >gi|292492806|ref|YP_003528245.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4] gi|291581401|gb|ADE15858.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4] Length = 286 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 96/280 (34%), Gaps = 12/280 (4%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 + + + G +++ S G+ P + + ++ + + Sbjct: 4 SFSKSWLNKGVFVLSLSLGLLIAACAPPTKPVDLERAEAAVEQVQTDPNVTQYVPVRLDE 63 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + +S L +++ + + EK+ E + + Sbjct: 64 AKEALQRAQVAWEKDESTEEVEHLAYLAQRRAAIAEVAAAEKAAQAEIKNLGQERQQMLM 123 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + R K++ + + + + +T R +L +F+ + Sbjct: 124 EVRELEARQAREQAKMAEARTRELEQRLAELDAEKTKRGYVL-----TLGDILFEVDRAE 178 Query: 244 PLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P + L ++ L + + I GHTD++ A N LS RA S Y+ LM + Sbjct: 179 LTPGGMQNLFRLVTFLKEYPDREVVIEGHTDST---GSAVYNQELSQRRADSVYKFLMNN 235 Query: 303 GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 G+S +RI G+ +D NRR++I++ Sbjct: 236 GISPERIVA-RGYGEAYPVAPNDTAAGRQRNRRVEIVILG 274 >gi|209886430|ref|YP_002290287.1| flagellar motor protein [Oligotropha carboxidovorans OM5] gi|209874626|gb|ACI94422.1| flagellar motor protein [Oligotropha carboxidovorans OM5] Length = 337 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 57/344 (16%), Positives = 115/344 (33%), Gaps = 31/344 (9%) Query: 19 KKVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 + N + D T+++A ++++++ + Q + K L Sbjct: 4 RTRRGGTGLNYWPG----FVDALSTLVLA---IVFLLSVFLVVQF-YLSQEVSGKDKALE 55 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + I N + L+ + S+ ++ K + Sbjct: 56 RLNAQIAQLTNLLSLEKVSSGTLNDQIAQLQASLATTEAERDRAKGMAESLTSGAAG-GG 114 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 ++ + ++ ++ L+ + + ++++ DL + Sbjct: 115 DLNKQLATEKQISERALAQVEVLNQQISALRRQLAALEEALNASEQKGKESQEKIADLGQ 174 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLPET 248 +++ L+ V + F IL D R + FD SS LPE Sbjct: 175 RLNVALAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDSGSSGLLPEG 234 Query: 249 IVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL 299 L ++ + A V+ + GHTD P + NW LS RA S Q L Sbjct: 235 RGELDQLATAITELEKKIPAEIPWVLRVDGHTDVRPINSPQFKSNWDLSAARAISVVQYL 294 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 + GVS R+ GF + + ++ NRRI++ + +R Sbjct: 295 ISRGVSPQRLVAA-GFGEFQPLDTATTDDAYKRNRRIELKLTER 337 >gi|330873802|gb|EGH07951.1| flagellar motor protein MotB [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 341 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 111/335 (33%), Gaps = 65/335 (19%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S T + G + + Sbjct: 36 MAFFLVLWLMSS------------------------ATPEQLLAVAGYFKDPVGFSDSGS 71 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 +L + + + + + E + Sbjct: 72 PYVIDLGGSPEMSPNQTLNPEVKTTPSP-------------DTVPIEAETSETKAEAVEQ 118 Query: 190 KRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +RL+ L +++ +LFE T+ G+ I I+D N PMFD S+ P Sbjct: 119 ERLEMLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYF 178 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + + + ISI GHTDA+PF NW LS +RA +A + L+ E+ Sbjct: 179 EDILLALADTIKSVPNKISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPEE 238 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++++ G A L +P NRRIDI+V ++ Sbjct: 239 QVARVVGHASSVLYDRDNPTGPINRRIDIVVLTKK 273 >gi|54294667|ref|YP_127082.1| flagellar motor protein MotD [Legionella pneumophila str. Lens] gi|53754499|emb|CAH15983.1| hypothetical protein lpl1744 [Legionella pneumophila str. Lens] Length = 273 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 76/185 (41%), Gaps = 7/185 (3%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 ++ KS +++ S + + +K+++ K L+ +++ Sbjct: 56 SEGMKSAFNQKDQNKATQSTDNLKDGPEEKKIKGTFKDGLDELNKSLSELEDGDFKLNRQ 115 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280 + I D + +FD S+ PE ++ L K+ E + + + + G+TD P Sbjct: 116 EGWVEI---DIKAGSLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDNVPIETP 172 Query: 281 AR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 NW LS RA + ++L G++ RI ++G+ + NRR++IL Sbjct: 173 QYPSNWELSAARAATVGRILNGFGIANHRIL-VTGYGDQYPITDNYTEAGRSQNRRVNIL 231 Query: 338 VEDRQ 342 + + Sbjct: 232 ITKNR 236 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 2/143 (1%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 K+K + N+ W + YADF+T+L AFF+VM+ I++ + K++ + Sbjct: 10 KQKKTEEHQDNH--RWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQKD 67 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + + D N ++ + K Q I + S Sbjct: 68 QNKATQSTDNLKDGPEEKKIKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGS 127 Query: 138 QQSEHCKNSLTRDSEKGKDLCKS 160 + K L + Sbjct: 128 LFDSGSADIKPEALIKLMKLAEK 150 >gi|134300281|ref|YP_001113777.1| OmpA/MotB domain-containing protein [Desulfotomaculum reducens MI-1] gi|134052981|gb|ABO50952.1| OmpA/MotB domain protein [Desulfotomaculum reducens MI-1] Length = 261 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 84/206 (40%), Gaps = 11/206 (5%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + K S + +E + + +++++ + K+I Sbjct: 41 DANKYHAIASSLAKTMGGSQSIMESGGPSMVPGASESKELDTAMEQIEQQKMEKIKKQIQ 100 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + + V G+++S D +F + +P + ++ K+G +L+ Sbjct: 101 EYVDK---NGLSGKVTVAIEERGVVVSFQD---VVLFPLGVADLVPHSQGIVDKVGAILS 154 Query: 261 HSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 + I + GHTD P N NW LSL R+ S L+ S + DR+S +G+ + Sbjct: 155 QTPNYIRVEGHTDNLPIQTNKFPSNWELSLARSASVVHRLINFSHIPPDRLSA-TGYGEY 213 Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342 R + A+D NRR+DI+V + Sbjct: 214 RPRRANDSDANRQQNRRVDIIVLRTK 239 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 2/93 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF--GKNL 76 +K + N W I Y+D +T+L+ FF+VM+ ++ D + AI G Sbjct: 2 RKRGQEPEKENNERWLITYSDLITLLLIFFVVMYTLSKVDANKYHAIASSLAKTMGGSQS 61 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 + S G E + I++ + Sbjct: 62 IMESGGPSMVPGASESKELDTAMEQIEQQKMEK 94 >gi|134094541|ref|YP_001099616.1| flagellar motor protein MotD [Herminiimonas arsenicoxydans] gi|133738444|emb|CAL61489.1| putative flagellar motor protein MotD [Herminiimonas arsenicoxydans] Length = 261 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 106/323 (32%), Gaps = 81/323 (25%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + ++ N W + YADF+T+L AFF+VM+ I++ ++ + + + Sbjct: 3 RRKHEEEHENHERWLVSYADFITLLFAFFVVMYAISSVNEGKYRILSNSLGIAFSGITPK 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + + D P SS + + L + H + + + + + ++ + Sbjct: 63 APALKD----PAPSSPSILPLPMPAHSPSQRANDAATKREKARMTNIARDILKAMAPLIR 118 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + T + N + E L+ + +K L+ +A+ + Sbjct: 119 EGKVRVTQTNRGVSVEI---------------NASVLFAPGEARLSAQSEKALRAVAEVL 163 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + + + V N MF Sbjct: 164 NKVDNDIQVEGHTDNVPI---------------NNAMFP--------------------- 187 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 NW LS RA S ++ ++SG++E R+ + G ++ Sbjct: 188 -----------------------SNWELSAVRASSVVRLFLESGMNEKRLVAM-GHGANQ 223 Query: 320 LKIASDPMNS--ANRRIDILVED 340 +++ NRR+ +++ Sbjct: 224 PVDSNETTEGRLRNRRVQLMILS 246 >gi|326795804|ref|YP_004313624.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] gi|326546568|gb|ADZ91788.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] Length = 300 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 3/209 (1%) Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL-AMKRKKRLQD 194 N + G KS + + + E +++E+ K ++ Sbjct: 61 NDPLGPSTAGYSANPIDLGGSPAKSNEKKLDLGLPEPGSTEQVTQERKQGEGNDGKEIER 120 Query: 195 LAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + + L + ++ + E T G+ I+++D PMF++ S+ +P++ VL Sbjct: 121 MNALLEQELKRQGLMNSEETNMRIEITPQGVRITLLDDPTKPMFERGSARLMPDSENVLL 180 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 IG +LA ISI GHTD+SP+ + DNW LS RA SA +++ + GVS+ R++++ Sbjct: 181 GIGSILARLKNPISISGHTDSSPYVDEREIDNWDLSSARANSARKIIEEGGVSDKRMAQV 240 Query: 313 SGFAHHRLKIASDPMNSANRRIDILVEDR 341 G A DP ++ NRRI I + Sbjct: 241 IGLADSIPYNRFDPTSAENRRISITLLTD 269 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 1/114 (0%) Query: 13 QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72 + ++I++ ++ G+WKI ADF +MAFFLV+WIIN AIE YFN Sbjct: 4 EELVIRRVKRRKKAGHHGGAWKIALADFALAMMAFFLVLWIINVASPQELAAIEGYFNDP 63 Query: 73 GKNLMTA-SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 S D P +S++ K+DL + E + V + + Sbjct: 64 LGPSTAGYSANPIDLGGSPAKSNEKKLDLGLPEPGSTEQVTQERKQGEGNDGKE 117 >gi|91215422|ref|ZP_01252393.1| outer membrane protein, OmpA/MotB family [Psychroflexus torquis ATCC 700755] gi|91186374|gb|EAS72746.1| outer membrane protein, OmpA/MotB family [Psychroflexus torquis ATCC 700755] Length = 457 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 94/291 (32%), Gaps = 16/291 (5%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 K + + F + S G+ + D + + + Sbjct: 171 KSSFKTAFEDDNFDYFQHSAGLTIAFGGTDSDGDGVYDKNDMCPDVPGLAEFNGCPDSDG 230 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 ++ + ++ + C +S + D C + +++N + ++ + Sbjct: 231 DGITDKDDKCPDTAGLEEFDGCADSDSDGIADPNDDCPNEAGTEALNGCPDADNDGIANK 290 Query: 182 KIL--AMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-------FETTRTGILISIIDQR 232 K + L D++ V I + + Sbjct: 291 NDDCPNEAGPKANNGCPYPDADGDGVLDKDDMCPDVAGTEANNGCPEVTEEIQKELNEYA 350 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T F+ + + L I +L ++ GHTD+ A++N LS R Sbjct: 351 KTINFETGKTTISKNSEEALTAIIAILDEYPNAKFTVEGHTDSV---GSAKNNESLSEAR 407 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 A S L+K+GV E R+S GF + ++D + NRR++I ++ Sbjct: 408 ALSVKSYLVKNGVDEFRLSSA-GFGEQKPVESNDTKAGRAENRRVEINLKK 457 >gi|269138690|ref|YP_003295391.1| flagellar motor protein [Edwardsiella tarda EIB202] gi|267984351|gb|ACY84180.1| flagellar motor protein [Edwardsiella tarda EIB202] gi|304558696|gb|ADM41360.1| Flagellar motor rotation protein MotB [Edwardsiella tarda FL6-60] Length = 332 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 3/201 (1%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-T 202 K +L+ + ++E + RL+ L +++ Sbjct: 68 KVALSEGQRSSDSFSPIPGGGDDVTQKEGEVRKFAEDPDPQTRAEQMRLKRLRERLEQVI 127 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ + ++ G+ I IID +N PMF S+ P +L+ I +L Sbjct: 128 INDPRLKALRPHLMINMMDEGLRIQIIDSQNRPMFQNGSAQVEPYMRNILRAIAPILNEL 187 Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 IS+ GHTD P+ N NW LS DRA ++ + L+ G++ ++I ++ G A Sbjct: 188 PNKISLSGHTDDLPYANGERGYSNWELSADRANASRRELIAGGLAGNKILRVVGMADTMN 247 Query: 321 KIASDPMNSANRRIDILVEDR 341 + NRRI ILV ++ Sbjct: 248 LRNLAGNAAVNRRISILVLNK 268 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 65/168 (38%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 I++KKK ++ G+WKI YADFMT +MAFFLVMW++ I +YF Sbjct: 4 GKHPVILVKKKRGGHGQASHGGAWKIAYADFMTAMMAFFLVMWLLAIASPQELTRIAEYF 63 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 K ++ + D +P + + D + + + + R Sbjct: 64 RTPLKVALSEGQRSSDSFSPIPGGGDDVTQKEGEVRKFAEDPDPQTRAEQMRLKRLRERL 123 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 +++ + + + ++G + + + + + + P Sbjct: 124 EQVIINDPRLKALRPHLMINMMDEGLRIQIIDSQNRPMFQNGSAQVEP 171 >gi|167576627|ref|ZP_02369501.1| Chemotaxis lafU protein [Burkholderia thailandensis TXDOH] Length = 311 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 79/217 (36%), Gaps = 2/217 (0%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 N Q + D G +S + + + Sbjct: 50 MNVTPEKERKQVAAEIAGHPFFDGGVGIFEQRSRKPVVAPFDAQQPERVKRRTPGAARER 109 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 LQ + + + V G+ I+I D MF++ S P+ Sbjct: 110 TIDSLQQRRALAARIMDEATRLGMNGNVATAINDDGVRITIHDSDKQGMFERRSDALNPQ 169 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVS 305 + +L + VL T + I GHTDA+ + ++ +NW LS RA A Q+L G+ Sbjct: 170 FVRLLTALVPVLGTVTNKMVIVGHTDATQYADTSVFSNNWNLSSRRALRARQILADGGMD 229 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 R+ +ISG + +P + NRR+++L+ + Sbjct: 230 AQRMFQISGMGDSVPAVPDNPDHDMNRRVELLLLTSR 266 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 67/177 (37%), Gaps = 8/177 (4%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+++ + II++ ++ G+WK+ +ADF LMA F+V+W++N T + Sbjct: 1 MSTNKEAGHG---PTIIRRAHKR-HEEHSGGAWKVAFADFTLALMALFMVLWVMNVTPEK 56 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +K + G GIF++++ + D E + + + T Sbjct: 57 ERKQVAAEI--AGHPFFDGGVGIFEQRSRKPVVA--PFDAQQPERVKRRTPGAARERTID 112 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 Q +R ++ + + + + + +D + + + P Sbjct: 113 SLQQRRALAARIMDEATRLGMNGNVATAINDDGVRITIHDSDKQGMFERRSDALNPQ 169 >gi|154244796|ref|YP_001415754.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus Py2] gi|154158881|gb|ABS66097.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2] Length = 340 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 103/324 (31%), Gaps = 20/324 (6%) Query: 37 YADFMTVLMAFFLVMWIINATDD----DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 + D ++ L+ F+ + + + + ++ + E+ + Sbjct: 18 FVDALSTLLLVFIFLLSVFMLTQFFLTQEMSGKDNVMQRLQAQIRQLTELLSLERATGQT 77 Query: 93 SSQNKIDLSIDEHITKNSVD--LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 + L T+ D S Q + ++ + Sbjct: 78 TDGELATLRASLEATETERDRLKSQLSAAPAPTSDEGRTRALAREVDLQKDVAARAVAQI 137 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + + ++ + N ++ + +RL + L+ ++ Sbjct: 138 ELLNQQISALRRQMAALEEALNVAEKRDAESQTKITDLGRRLNVALAQRVQELTRFRSEF 197 Query: 211 IVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------A 260 + R + + ++ FD+ S+ P PE + L K+ + Sbjct: 198 FGRLRDILGNRPDVRVVGDRFVFQSEVFFDRGSATPRPEALAELDKLAGAILDLEKSIPP 257 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + I GHTD P NW LS RA + Q L+ GVS + GF ++ Sbjct: 258 DISWALRIDGHTDNRPIATPQFPSNWELSAARAIAVVQYLISKGVSPQHLIAA-GFGEYQ 316 Query: 320 LKIA--SDPMNSANRRIDILVEDR 341 SD + NRRI++ + +R Sbjct: 317 PIDPAASDEARARNRRIELKLTER 340 >gi|262199850|ref|YP_003271059.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262083197|gb|ACY19166.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 266 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 74/216 (34%), Gaps = 12/216 (5%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 ++ ++ + T SE+ + ++ + + L + + K + Sbjct: 46 DLAEQERDANAQEVASLQTELSERAEMSDETRRRMAKLTDDMQATEQELLELRAQQQKAE 105 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +RL+ + + + + + + +F + + Sbjct: 106 ERLKAFRQLYDRFQALVDTGKLQVDFRNGQMVLKL-------PSEVLFPSGRAKLSDKGQ 158 Query: 250 VVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSED 307 L ++ +L + + GHTDA R DNW LS RA S ++++G + Sbjct: 159 EALSEVLNILMEFKDRRFLVAGHTDAVKIRGGRFKDNWDLSTARAVSVVDYMVEAGFDPN 218 Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 + G+ +D + NRRI+I++ Sbjct: 219 NLGAA-GYGEFDPVAPNDTAENRALNRRIEIILVPD 253 >gi|51596729|ref|YP_070920.1| flagellar motor protein MotB [Yersinia pseudotuberculosis IP 32953] gi|186895791|ref|YP_001872903.1| flagellar motor protein MotB [Yersinia pseudotuberculosis PB1/+] gi|51590011|emb|CAH21644.1| chemotaxis MotB protein [Yersinia pseudotuberculosis IP 32953] gi|186698817|gb|ACC89446.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+] Length = 439 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224 + + + + RL L +K+ + + +L G+ Sbjct: 88 GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282 I IID +N PMF S+ P +L+ I +L +S+ GHTD P+ Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 NW LS DRA ++ + L+ G+ E +I ++ G A + NRRI ILV ++Q Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 48/107 (44%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +N I++KK+ + GSWKI YADFMT +MAFFLVMW++ + I + Sbjct: 2 KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 YF K +T+ +P + + NS + + Sbjct: 62 YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108 >gi|146296538|ref|YP_001180309.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410114|gb|ABP67118.1| OmpA/MotB domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 257 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 13/164 (7%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 K M ++ + D+ K++ S + + VL G+ I + D +F+ S Sbjct: 92 KNRQMTEEEIINDIQKQVLSLIKEHGIEG---KVLVIQEERGLSILLKD----VLFNSGS 144 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQV- 298 + P+ V+ +I ++L I GHTD P N NW LS RA + Q Sbjct: 145 AQLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNKYFYSNWELSTARATTVLQEI 204 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L S V +R + G+ +R ++ + NRR+ I++ Sbjct: 205 LRVSKVKPERF-SVVGYGEYRPIASNKTPQGRALNRRVTIVILR 247 >gi|153950639|ref|YP_001400614.1| flagellar motor protein MotB [Yersinia pseudotuberculosis IP 31758] gi|152962134|gb|ABS49595.1| chemotaxis MotB protein [Yersinia pseudotuberculosis IP 31758] Length = 433 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224 + + + + RL L +K+ + + +L G+ Sbjct: 88 GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282 I IID +N PMF S+ P +L+ I +L +S+ GHTD P+ Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 NW LS DRA ++ + L+ G+ E +I ++ G A + NRRI ILV ++Q Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 48/107 (44%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +N I++KK+ + GSWKI YADFMT +MAFFLVMW++ + I + Sbjct: 2 KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 YF K +T+ +P + + NS + + Sbjct: 62 YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108 >gi|238764369|ref|ZP_04625319.1| hypothetical protein ykris0001_37320 [Yersinia kristensenii ATCC 33638] gi|238697395|gb|EEP90162.1| hypothetical protein ykris0001_37320 [Yersinia kristensenii ATCC 33638] Length = 375 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 8/223 (3%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK-----EK 182 + S + ++ + T KS+D I + + + + Sbjct: 8 MWLLSVSSPQELTQIAEYFRTPLKVALTHGEKSSDSTSPIPGGGDDPTQQVGEVRKHIDS 67 Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + K + RL L +K+ + + +L G+ I IID +N PMF S Sbjct: 68 EESRKEEYRLNKLREKLDQLIESDPRLRALRPHLLINMMDEGLRIQIIDSQNRPMFKMGS 127 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299 + P +L+ I +L IS+ GHTD P+ + NW LS DRA ++ + L Sbjct: 128 AQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSNWELSADRANASRREL 187 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + G+ E ++ ++ G A + NRRI ILV ++Q Sbjct: 188 LAGGLDEGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 230 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 30/74 (40%) Query: 44 LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103 +MAFFLVMW+++ + I +YF K +T + D +P + + Sbjct: 1 MMAFFLVMWLLSVSSPQELTQIAEYFRTPLKVALTHGEKSSDSTSPIPGGGDDPTQQVGE 60 Query: 104 EHITKNSVDLKIGS 117 +S + + Sbjct: 61 VRKHIDSEESRKEE 74 >gi|162420339|ref|YP_001607210.1| flagellar motor protein MotB [Yersinia pestis Angola] gi|162353154|gb|ABX87102.1| chemotaxis MotB protein [Yersinia pestis Angola] Length = 421 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224 + + + + RL L +K+ + + +L G+ Sbjct: 88 GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282 I IID +N PMF S+ P +L+ I +L +S+ GHTD P+ Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 NW LS DRA ++ + L+ G+ E +I ++ G A + NRRI ILV ++Q Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 48/107 (44%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +N I++KK+ + GSWKI YADFMT +MAFFLVMW++ + I + Sbjct: 2 KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 YF K +T+ +P + + NS + + Sbjct: 62 YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108 >gi|115522688|ref|YP_779599.1| hypothetical protein RPE_0661 [Rhodopseudomonas palustris BisA53] gi|115516635|gb|ABJ04619.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53] Length = 341 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 55/310 (17%), Positives = 98/310 (31%), Gaps = 13/310 (4%) Query: 44 LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103 L++ FLV+ + + K Q N L + E Sbjct: 33 LLSVFLVVQFFLSQEVTGKDKALQELNAKLAQLNDMLSLEKLGKIGLEDQLGQLRAGLAS 92 Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163 + V N + + + +L + + + Sbjct: 93 AETERKRVQGLYDGLAGAGNDAAGRANELNKALDSERQISTRALAQIEVLNQQIAALRRQ 152 Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 ++ + + + + +RL + LS ++ + R+ Sbjct: 153 LAALEEALDVSEKRGKESQGKIADLGQRLNVALAQRVQELSRYRSEFFGRLRAILGNRSE 212 Query: 224 ILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTD 273 I I ++ FD ++ LPE L K+ VL T V+ + GHTD Sbjct: 213 IRIVGDRFVFQSEVFFDTGQAVLLPEGRAELDKLASVLIDLGKQIPDEITWVLRVDGHTD 272 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--AN 331 P + NW LS RA S Q L+ GV R+ GFA + + + N Sbjct: 273 VRPITGAFKSNWELSSARAISVVQYLVTLGVPAQRLVAA-GFAEFQPLDVAATEEAYRRN 331 Query: 332 RRIDILVEDR 341 RRI++ + +R Sbjct: 332 RRIELKLTER 341 >gi|261344163|ref|ZP_05971807.1| chemotaxis MotB protein [Providencia rustigianii DSM 4541] gi|282567758|gb|EFB73293.1| chemotaxis MotB protein [Providencia rustigianii DSM 4541] Length = 306 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 2/152 (1%) Query: 191 RLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 R + L + + + + + +L + G+ I I+D N PMF S+I P Sbjct: 112 RFEKLKENLEQAILQDPRLNELKPHLLIDMINDGLRIQIVDSANRPMFKVGSAIVEPYMR 171 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ I +L ISI GHTD P+ + NW LS DRA ++ + L+ G+ E + Sbjct: 172 DILRAIAPLLNDVPNRISISGHTDDLPYASEAYYSNWELSSDRANASRRELIMGGMEEQK 231 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 I ++ G A + + NRRI I+V + Sbjct: 232 ILRVVGMASSIHLDKENGLAPINRRISIIVLN 263 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 46/102 (45%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 N II KK ++ G+WKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 3 GNHPQIIRVKKRGGHQQGSHGGAWKIAYADFMTAMMAFFLVMWLISISSPQELTKIAEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111 + D NP ++ I D N++ Sbjct: 63 RTPLSVAINPGSKSGDATNPIPGGGKDPIFRDGDVMPEPNNI 104 >gi|150388139|ref|YP_001318188.1| OmpA/MotB domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149948001|gb|ABR46529.1| OmpA/MotB domain protein [Alkaliphilus metalliredigens QYMF] Length = 237 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 75/196 (38%), Gaps = 7/196 (3%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DLAKKISSTLSGL 206 ++ + ++ E + +EN L + + + ++ DL + + + L Sbjct: 44 AEEASVLYHVKEALTSEVADLSDENQRLLEEKESLAALLFGLEDIELDLVQSQETFIRFL 103 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 ++++ V G++I D +F + E ++L + L I Sbjct: 104 RENHLLDRVDVIEEERGLVIRFRDS---VLFGSGQARISQEGYMLLDHVTAKLRTIDNAI 160 Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 I G TD P + NW LS+ RA + ++ E+ +SGF + +++ Sbjct: 161 VIEGFTDNIPIQTNEFPSNWELSVARAIGVARYMIDEEYIEESRISVSGFGEQQPIDSNE 220 Query: 326 PMNSA--NRRIDILVE 339 NRRI+I + Sbjct: 221 TNEGRANNRRIEITIL 236 >gi|310817592|ref|YP_003949950.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309390664|gb|ADO68123.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1] Length = 640 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 87/274 (31%), Gaps = 21/274 (7%) Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 + G Q P+ D + K K + E+ Sbjct: 381 ADQCPTVAGEAVHQGCPDTDKDGIPDAADQCPSAAGLAVFKGCPDTDKDGLRDSEDLCPL 440 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 + + C K +D + +++++ KE + Sbjct: 441 EAGPADRQGC-------------PQKDSDGDGLLDEQDACPSVAGLKELKGCPAKDTDND 487 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 ++ + + + + + I ID + T FD + + +L Sbjct: 488 TVSDHLDNCPNEAGPASNQGCPAKQKQLVAIRQDRIDIKETVYFDSGKATIQRRSFKLLD 547 Query: 254 KIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++ ++L E+ I++ GHTD N RLS RA + L + GV+ R+ Sbjct: 548 QVAKLLREHPEIESITVEGHTDNV---GKPEANLRLSQQRAEAVRDYLARKGVAPQRLEA 604 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 G+ R + + NRR+D + R+G Sbjct: 605 -KGYGQERPIAPNTTSKGRATNRRVDFITTTREG 637 >gi|115524024|ref|YP_780935.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115517971|gb|ABJ05955.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53] Length = 272 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 108/321 (33%), Gaps = 63/321 (19%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + + W + +AD LMA L +++ A K + + Sbjct: 3 KKKREEAHGGHGWFVTFAD----LMALLLAFFVM-------LVAFSTQDKDKLKVVAGSM 51 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 + F Q + + D KN+ + + +N+ Sbjct: 52 RDAFGVQPDSRYAGVLEQDGVPISGKLKNASLVSTNQASNTPSPDEGDND---------- 101 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 S + S A++ L +++K Sbjct: 102 -------------------------SAKTKAEREFALASASLRQALQDMPELTEISKN-- 134 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 V+FE T+ G+ + I DQ MF + S +P T +++Q++ L Sbjct: 135 --------------VIFEETKDGLNMEITDQDGRSMFAEGSKVPYDRTRLLVQRLAAPLR 180 Query: 261 HSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + ISI GHT A + N + LS DRA + Q+L + GV +I +SG A + Sbjct: 181 ATPLRISIAGHTSAGVVIGRSDYNAFDLSSDRANAVRQILEREGVPTSQIYAVSGRADSQ 240 Query: 320 LKIASDPMNSANRRIDILVED 340 D SANRR+ I + Sbjct: 241 PLFPDDATLSANRRVTITLMR 261 >gi|298507057|gb|ADI85780.1| chemotaxis MotB protein [Geobacter sulfurreducens KN400] Length = 266 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 78/224 (34%), Gaps = 8/224 (3%) Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 Q + I + S + + + SI + K Sbjct: 38 GQSDKEKIEQVMQSMRESFGFTATGSAPRPAVLDSSDMRIMPSIAPDLTNKGRGQGKNAD 97 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + +D SS + L+ V R G+++S+ + FD S+I Sbjct: 98 SKGRIRATEKDFQAIKSSIEAYLIKQGAQDKVNVGINRRGLVVSLKEA---GFFDSGSAI 154 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK- 301 +L K+ E L+ + + + GHTD P + NW LS RA + L + Sbjct: 155 VKESAYPLLAKVAESLSAYSNPVRVEGHTDTMPISSAQFPSNWELSTARATNIVHFLTRS 214 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 IS GF +R ++ NRR+DI++ +G Sbjct: 215 YDFDPGAISAA-GFGEYRPIADNNTAEGRSKNRRVDIVLLSGEG 257 >gi|22125717|ref|NP_669140.1| flagellar motor protein MotB [Yersinia pestis KIM 10] gi|108807851|ref|YP_651767.1| flagellar motor protein MotB [Yersinia pestis Antiqua] gi|108812127|ref|YP_647894.1| flagellar motor protein MotB [Yersinia pestis Nepal516] gi|149366375|ref|ZP_01888409.1| chemotaxis MotB protein [Yersinia pestis CA88-4125] gi|165925475|ref|ZP_02221307.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165938485|ref|ZP_02227042.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008640|ref|ZP_02229538.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166210582|ref|ZP_02236617.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401678|ref|ZP_02307169.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422628|ref|ZP_02314381.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426350|ref|ZP_02318103.1| chemotaxis MotB protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218928797|ref|YP_002346672.1| flagellar motor protein MotB [Yersinia pestis CO92] gi|229841656|ref|ZP_04461814.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843773|ref|ZP_04463916.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str. India 195] gi|229894516|ref|ZP_04509698.1| chemotaxis MotB protein [Yersinia pestis Pestoides A] gi|229902447|ref|ZP_04517566.1| chemotaxis MotB protein [Yersinia pestis Nepal516] gi|270490373|ref|ZP_06207447.1| flagellar motor protein MotB [Yersinia pestis KIM D27] gi|294504144|ref|YP_003568206.1| flagellar motor protein [Yersinia pestis Z176003] gi|21958635|gb|AAM85391.1|AE013785_4 lateral flagellar motor protein [Yersinia pestis KIM 10] gi|108775775|gb|ABG18294.1| chemotaxis MotB protein [Yersinia pestis Nepal516] gi|108779764|gb|ABG13822.1| chemotaxis MotB protein [Yersinia pestis Antiqua] gi|115347408|emb|CAL20310.1| chemotaxis MotB protein [Yersinia pestis CO92] gi|149290749|gb|EDM40824.1| chemotaxis MotB protein [Yersinia pestis CA88-4125] gi|165913600|gb|EDR32220.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922584|gb|EDR39735.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165993022|gb|EDR45323.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207762|gb|EDR52242.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958475|gb|EDR55496.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048783|gb|EDR60191.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054705|gb|EDR64509.1| chemotaxis MotB protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680493|gb|EEO76590.1| chemotaxis MotB protein [Yersinia pestis Nepal516] gi|229689381|gb|EEO81444.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694119|gb|EEO84167.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703535|gb|EEO90552.1| chemotaxis MotB protein [Yersinia pestis Pestoides A] gi|262366194|gb|ACY62751.1| flagellar motor protein [Yersinia pestis D182038] gi|270338877|gb|EFA49654.1| flagellar motor protein MotB [Yersinia pestis KIM D27] gi|294354603|gb|ADE64944.1| flagellar motor protein [Yersinia pestis Z176003] Length = 427 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224 + + + + RL L +K+ + + +L G+ Sbjct: 88 GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282 I IID +N PMF S+ P +L+ I +L +S+ GHTD P+ Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 NW LS DRA ++ + L+ G+ E +I ++ G A + NRRI ILV ++Q Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 48/107 (44%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +N I++KK+ + GSWKI YADFMT +MAFFLVMW++ + I + Sbjct: 2 KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 YF K +T+ +P + + NS + + Sbjct: 62 YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108 >gi|254973922|ref|ZP_05270394.1| chemotaxis protein [Clostridium difficile QCD-66c26] gi|255091309|ref|ZP_05320787.1| chemotaxis protein [Clostridium difficile CIP 107932] gi|255312966|ref|ZP_05354549.1| chemotaxis protein [Clostridium difficile QCD-76w55] gi|255515725|ref|ZP_05383401.1| chemotaxis protein [Clostridium difficile QCD-97b34] gi|255648819|ref|ZP_05395721.1| chemotaxis protein [Clostridium difficile QCD-37x79] gi|260682038|ref|YP_003213323.1| chemotaxis protein [Clostridium difficile CD196] gi|260685636|ref|YP_003216769.1| chemotaxis protein [Clostridium difficile R20291] gi|306518934|ref|ZP_07405281.1| chemotaxis protein [Clostridium difficile QCD-32g58] gi|260208201|emb|CBA60548.1| chemotaxis protein [Clostridium difficile CD196] gi|260211652|emb|CBE01912.1| chemotaxis protein [Clostridium difficile R20291] Length = 231 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%) Query: 196 AKKISSTLSGLVAD-NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + L V + N+ V + GIL+ + D +FD S ++ L K Sbjct: 85 KSNLEQDLKDKVNNSNLQNSVTVKDDSRGILLELDDS---ILFDSGISELKADSKATLNK 141 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKI 312 + +++ I I GHTD P ++ NW LS RA S + + + G+ R+ Sbjct: 142 VYDMIKMMKNKIVIEGHTDNVPVKSSTHESNWDLSSSRAVSVVRYFVEEKGMDP-RLFSA 200 Query: 313 SGFAHHRLKIASDPM--NSANRRIDILVE 339 +G ++ ++++ + NRR++IL+ Sbjct: 201 TGCGEYQPLVSNETAKGRAENRRVNILIT 229 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 29/72 (40%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K N +W YAD +T+++ FF++++ + D + K I + Sbjct: 3 RKKNKKKDEINPDAWLATYADTITLILTFFVLLYATSVVDMEKFKNIADALKGQFSGISM 62 Query: 79 ASKGIFDEQNPP 90 S G + P Sbjct: 63 FSTGSSTSEKSP 74 >gi|45441604|ref|NP_993143.1| flagellar motor protein MotB [Yersinia pestis biovar Microtus str. 91001] gi|145599064|ref|YP_001163140.1| flagellar motor protein MotB [Yersinia pestis Pestoides F] gi|45436465|gb|AAS62020.1| chemotaxis MotB protein [Yersinia pestis biovar Microtus str. 91001] gi|145210760|gb|ABP40167.1| chemotaxis MotB protein [Yersinia pestis Pestoides F] gi|320014810|gb|ADV98381.1| chemotaxis MotB protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 433 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224 + + + + RL L +K+ + + +L G+ Sbjct: 88 GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282 I IID +N PMF S+ P +L+ I +L +S+ GHTD P+ Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 NW LS DRA ++ + L+ G+ E +I ++ G A + NRRI ILV ++Q Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 48/107 (44%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +N I++KK+ + GSWKI YADFMT +MAFFLVMW++ + I + Sbjct: 2 KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 YF K +T+ +P + + NS + + Sbjct: 62 YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108 >gi|91978797|ref|YP_571456.1| hypothetical protein RPD_4338 [Rhodopseudomonas palustris BisB5] gi|91685253|gb|ABE41555.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] Length = 341 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 117/346 (33%), Gaps = 32/346 (9%) Query: 19 KKVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 + D N + D T+++A ++++++ + Q K L Sbjct: 5 RGRRQDTGFNYWPG----FVDALSTLILA---IVFLLSVFLVVQF-FLSQEVTGKDKALQ 56 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + + + K++L + + ++ K + Sbjct: 57 ELNARLAQLSDLLSLEKLGKLNLEEQLSQVRAGLSAAQSERDRVKGLYDGLAGAGNDAAG 116 Query: 138 QQSEHCKNSLTRDSEKGKDLCKST---DLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + E K + + L + ++ ++ L + + + R+ D Sbjct: 117 RAGELNKALDSEKQLSARALAQVEVLNQQISALRRQLAALEEALDASEKRDKESQGRIAD 176 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPL 245 L ++++ L+ V + F IL D R + FD ++ L Sbjct: 177 LGQRLNLALAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDTGQALLL 236 Query: 246 PETIVVLQKIGEVLAH--------STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 PE L K+ L V+ + GHTD P + NW LS RA S Q Sbjct: 237 PEGRAELDKLAPALTELDKKIPPEIAWVLRVDGHTDRRPITGAFKSNWELSSARAISVVQ 296 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 L+ GV R+ GFA + ++ ++ NRRI++ + +R Sbjct: 297 YLVSLGVPAQRLVAA-GFAEFQPLDIANTDDAYKRNRRIELKLTER 341 >gi|307610480|emb|CBX00052.1| hypothetical protein LPW_18071 [Legionella pneumophila 130b] Length = 267 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 7/185 (3%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 ++ KS +++ S + + +K+ + K L+ +++ Sbjct: 50 SEGMKSAFNQKDQNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQ 109 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280 + I D + +FD S+ PE ++ L K+ E + + + + G+TD P Sbjct: 110 EGWVEI---DIKAGSLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDNVPIETP 166 Query: 281 AR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 NW LS RA + ++L G++ RI ++G+ + NRR++IL Sbjct: 167 QYPSNWELSAARAATVGRILNGFGIANHRIL-VTGYGDQYPITDNYTEAGRSQNRRVNIL 225 Query: 338 VEDRQ 342 + + Sbjct: 226 ITKNR 230 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 2/143 (1%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 K+K + ++ W + YADF+T+L AFF+VM+ I++ + K++ + Sbjct: 4 KQKKTEEHQDSH--RWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQKD 61 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + + D N ++ + K Q I + S Sbjct: 62 QNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGS 121 Query: 138 QQSEHCKNSLTRDSEKGKDLCKS 160 + K L + Sbjct: 122 LFDSGSADIKPEALIKLMKLAEK 144 >gi|212709470|ref|ZP_03317598.1| hypothetical protein PROVALCAL_00512 [Providencia alcalifaciens DSM 30120] gi|212687808|gb|EEB47336.1| hypothetical protein PROVALCAL_00512 [Providencia alcalifaciens DSM 30120] Length = 312 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 2/152 (1%) Query: 191 RLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 R + L + + + + + +L + G+ I I+D N PMF S+ P Sbjct: 112 RFEKLKENLEQAILQDPRLNELKPHLLIDMINDGLRIQIVDSANRPMFKVGSATVEPYMR 171 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ I +L ISI GHTD P+ + NW LS DRA ++ + L+ G+ E + Sbjct: 172 DILRAIAPLLNDVPNRISISGHTDDLPYASEAYYSNWELSSDRANASRRELIMGGMDERK 231 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + ++ G A + + NRRI I+V + Sbjct: 232 VLRVVGMASSIHLDKENGLAPVNRRISIIVLN 263 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 12 DQFIIIKKKVAIDDTPN-NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + II+ K + + G+WKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 4 NGPQIIRVKKKGGHQQHAHGGAWKIAYADFMTAMMAFFLVMWLISISSPQELTKIAEYFR 63 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111 + D NP ++ I D N++ Sbjct: 64 TPLSTAINPGAKSGDATNPIPGGGKDPIFRDGDVMPEPNNI 104 >gi|170023989|ref|YP_001720494.1| flagellar motor protein MotB [Yersinia pseudotuberculosis YPIII] gi|169750523|gb|ACA68041.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII] Length = 451 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224 + + + + RL L +K+ + + +L G+ Sbjct: 88 GDDPTQQVGEVRKQINSEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGL 147 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282 I IID +N PMF S+ P +L+ I +L +S+ GHTD P+ Sbjct: 148 RIQIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGY 207 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 NW LS DRA ++ + L+ G+ E +I ++ G A + NRRI ILV ++Q Sbjct: 208 SNWELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 48/107 (44%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +N I++KK+ + GSWKI YADFMT +MAFFLVMW++ + I + Sbjct: 2 KHQNHPVILVKKRKTKHGAAHYGGSWKIAYADFMTAMMAFFLVMWLLAVSSPQELTQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 YF K +T+ +P + + NS + + Sbjct: 62 YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108 >gi|82702444|ref|YP_412010.1| flagellar motor protein MotD [Nitrosospira multiformis ATCC 25196] gi|82410509|gb|ABB74618.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196] Length = 288 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 83/198 (41%), Gaps = 7/198 (3%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + + S + + EE+ + + +++ ++ +A+ + + Sbjct: 58 AQSDRSVLITPESAPSSPVQESPTEEDRSIKKARRLAEAQRGQQEAMEVIARDVVAAFQP 117 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + V + G+ + I + +F ++ + VL+ + +VL ++ Sbjct: 118 FRSLIENGQVRVIPSSRGLAVEINAK---VLFAPGQAVLEQNSARVLEAVAQVLKNNDYP 174 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I + GHTD+ P NW LS RA S ++L+ SGV R++ + G+ +R ++ Sbjct: 175 IQVEGHTDSIPIVTDKFPSNWELSAVRASSVVRLLIGSGVEAARLTAV-GYGENRPVDSN 233 Query: 325 DPMNS--ANRRIDILVED 340 D + NRR+ I++ Sbjct: 234 DTEDGRTRNRRVTIMILS 251 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 45/125 (36%), Gaps = 1/125 (0%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K +++ N+ W + YADF+T+L+A F+VM+ ++ ++ + + Sbjct: 3 RKRKLEERENH-ERWLVSYADFITLLLALFVVMYAVSQVNEGKYQRMAGSLVNAFGAQSD 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 S I E P ++ + + + + G + R F S Sbjct: 62 RSVLITPESAPSSPVQESPTEEDRSIKKARRLAEAQRGQQEAMEVIARDVVAAFQPFRSL 121 Query: 139 QSEHC 143 Sbjct: 122 IENGQ 126 >gi|302389670|ref|YP_003825491.1| OmpA/MotB domain protein [Thermosediminibacter oceani DSM 16646] gi|302200298|gb|ADL07868.1| OmpA/MotB domain protein [Thermosediminibacter oceani DSM 16646] Length = 248 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 6/148 (4%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + +T ++ +N +KG+ E G+ I I+ +FD + + VL KI Sbjct: 96 ENLENTFQEIINENNLKGIRVEREERGLAIRFIE---GALFDSGKAYLREDARQVLDKIA 152 Query: 257 EVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L I + GHTD P N NW LS RA + + ++ + +G+ Sbjct: 153 PILKKIQRPIRVEGHTDNVPIHNSEFPSNWELSTTRAVNVVRYFIEKHNISPHMISAAGY 212 Query: 316 AHHRLKIASDPM--NSANRRIDILVEDR 341 + +D + NRR+DI++ + Sbjct: 213 GEYHPIAPNDSEKNRALNRRVDIIILNS 240 >gi|149191181|ref|ZP_01869439.1| chemotaxis LafU protein [Vibrio shilonii AK1] gi|148835019|gb|EDL51998.1| chemotaxis LafU protein [Vibrio shilonii AK1] Length = 322 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 3/158 (1%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 ++ L+ LA+++ LSG+ + + V T G+ + I D PMF + + Sbjct: 109 EFNSQQELEVLAQRVKQELSGI---DALGSVSVFVTPQGVKLVIADSDKGPMFFRGGAKV 165 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P +L + +L + I GHTDAS ++ NW LS +RA SA L K G+ Sbjct: 166 TPFYQDLLLNLAGLLEKIENKMIITGHTDASRYKGSRMTNWELSSNRANSARYYLDKGGL 225 Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E I +++G + ++ + NRRI++ + + Sbjct: 226 QERHIFQVTGMSDTAPIDFNNAKSGINRRIELYILTAE 263 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 1/185 (0%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E II KK + G WK+ AD M LM FLV+WI+ D D +K + YF Sbjct: 2 EQPNVIINKKGRRKRGELQHGG-WKVAMADLMISLMCLFLVLWILQVVDVDDQKKLLNYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +M + + D + + + + +Q + Sbjct: 61 AYGNDPIMHLGTNESGGNSINPLPLPHVATSHYDAELHRINDTSVLEGEFNSQQELEVLA 120 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 S S+ + K + +D + P + Sbjct: 121 QRVKQELSGIDALGSVSVFVTPQGVKLVIADSDKGPMFFRGGAKVTPFYQDLLLNLAGLL 180 Query: 190 KRLQD 194 +++++ Sbjct: 181 EKIEN 185 >gi|52842007|ref|YP_095806.1| flagellar motor protein MotD [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629118|gb|AAU27859.1| flagellar motor protein MotB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 273 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 7/185 (3%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 ++ KS +++ S + + +K+ + K L+ +++ Sbjct: 56 SEGMKSAFNQKDQNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQ 115 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280 + I D + +FD S+ PE ++ L K+ E + + + + G+TD P Sbjct: 116 EGWVEI---DIKAGSLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDNVPIETP 172 Query: 281 AR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 NW LS RA + ++L G++ RI ++G+ + NRR++IL Sbjct: 173 QYPSNWELSAARAATVGRILNGFGIANHRIL-VTGYGDQYPITDNYTEAGRSQNRRVNIL 231 Query: 338 VEDRQ 342 + + Sbjct: 232 ITKNR 236 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 2/143 (1%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 K+K + ++ W + YADF+T+L AFF+VM+ I++ + K++ + Sbjct: 10 KQKKTEEHQDSH--RWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQKD 67 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + + D N ++ + K Q I + S Sbjct: 68 QNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGS 127 Query: 138 QQSEHCKNSLTRDSEKGKDLCKS 160 + K L + Sbjct: 128 LFDSGSADIKPEALIKLMKLAEK 150 >gi|167466606|ref|ZP_02331310.1| flagellar motor protein MotB [Yersinia pestis FV-1] Length = 427 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 83/224 (37%), Gaps = 3/224 (1%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + ++ L + + S S + + Sbjct: 44 GAVRLAVSSPQELPQIAEYFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQIN 103 Query: 182 KILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + RL L +K+ + + +L G+ I IID +N PMF Sbjct: 104 SEESRQEIHRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMG 163 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQV 298 S+ P +L+ I +L +S+ GHTD P+ NW LS DRA ++ + Sbjct: 164 SAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGYSNWELSADRANASRRE 223 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 L+ G+ E +I ++ G A + NRRI ILV ++Q Sbjct: 224 LLAGGLDEGKILRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 267 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 42/107 (39%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +N I++KK+ + GSWKI YA MT +MAFFL + + I + Sbjct: 2 KHQNHPVILVKKRKTKHGAAHYGGSWKIAYAKVMTAMMAFFLGAVRLAVSSPQELPQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 YF K +T+ +P + + NS + + Sbjct: 62 YFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQVGEVRKQINSEESR 108 >gi|115373816|ref|ZP_01461109.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca DW4/3-1] gi|115369215|gb|EAU68157.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca DW4/3-1] Length = 669 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 87/274 (31%), Gaps = 21/274 (7%) Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 + G Q P+ D + K K + E+ Sbjct: 410 ADQCPTVAGEAVHQGCPDTDKDGIPDAADQCPSAAGLAVFKGCPDTDKDGLRDSEDLCPL 469 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 + + C K +D + +++++ KE + Sbjct: 470 EAGPADRQGCPQ-------------KDSDGDGLLDEQDACPSVAGLKELKGCPAKDTDND 516 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 ++ + + + + + I ID + T FD + + +L Sbjct: 517 TVSDHLDNCPNEAGPASNQGCPAKQKQLVAIRQDRIDIKETVYFDSGKATIQRRSFKLLD 576 Query: 254 KIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++ ++L E+ I++ GHTD N RLS RA + L + GV+ R+ Sbjct: 577 QVAKLLREHPEIESITVEGHTDNV---GKPEANLRLSQQRAEAVRDYLARKGVAPQRLEA 633 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 G+ R + + NRR+D + R+G Sbjct: 634 -KGYGQERPIAPNTTSKGRATNRRVDFITTTREG 666 >gi|255527289|ref|ZP_05394169.1| OmpA/MotB domain protein [Clostridium carboxidivorans P7] gi|255509027|gb|EET85387.1| OmpA/MotB domain protein [Clostridium carboxidivorans P7] Length = 182 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 7/140 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + + V E G+++S+ D F+ + + + L +IG++L Sbjct: 5 YKKNGMQNSVTTEVDERGLVVSLRDTL---FFETGKAEVIAASQGKLVEIGKILNQLDNT 61 Query: 266 ISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + I GHTD P N NW+LS RA + ++L+ +GV ++S ++ + +R + + Sbjct: 62 MRIEGHTDNVPIHNEQFSDNWQLSSARALNVTELLIANGVPPKKLSSVA-YGEYRPVLDN 120 Query: 325 DPM--NSANRRIDILVEDRQ 342 + NRR+DI+V + Sbjct: 121 STEDGRARNRRVDIIVVSNK 140 >gi|126697829|ref|YP_001086726.1| chemotaxis protein [Clostridium difficile 630] gi|255099425|ref|ZP_05328402.1| chemotaxis protein [Clostridium difficile QCD-63q42] gi|115249266|emb|CAJ67079.1| Flagellar motor rotation protein MotB (Chemotaxis protein MotB) [Clostridium difficile] Length = 231 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%) Query: 196 AKKISSTLSGLVAD-NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + L V + N+ V + GIL+ + D +FD S ++ L K Sbjct: 85 KSNLEQDLKDKVNNSNLQNSVTVKDDSRGILLELDDS---ILFDSGISELKVDSKATLNK 141 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKI 312 + +++ I I GHTD P ++ NW LS RA S + + + G+ R+ Sbjct: 142 VYDMIKMMKNKIVIEGHTDNVPVKSSTHESNWDLSSSRAVSVVRYFVEEKGMDP-RLFSA 200 Query: 313 SGFAHHRLKIASDPM--NSANRRIDILVE 339 +G ++ ++++ + NRR++IL+ Sbjct: 201 TGCGEYQPLVSNETAKGRAENRRVNILIT 229 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 7/108 (6%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K N +W YAD +T+++ FF++++ + D + K I Sbjct: 3 RKKNKKKDEINPDAWLATYADTITLILTFFVLLYATSVVDMEKFKNIADALK-------G 55 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 G S ++ ID + + K++++ + Q Sbjct: 56 QFSGTSIFSTGSSTSEKSPIDSVLVDKNDKSNLEQDLKDKVNNSNLQN 103 >gi|182418302|ref|ZP_02949597.1| chemotaxis protein MotB [Clostridium butyricum 5521] gi|237666437|ref|ZP_04526422.1| chemotaxis protein MotB [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377684|gb|EDT75228.1| chemotaxis protein MotB [Clostridium butyricum 5521] gi|237657636|gb|EEP55191.1| chemotaxis protein MotB [Clostridium butyricum E4 str. BoNT E BL5262] Length = 244 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 77/215 (35%), Gaps = 8/215 (3%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 F L S + + KSTD + + + KI ++ Sbjct: 32 FVLLYSMSTVDAQKVQAISQAFSIMSGKSTDSILQYDMYQGSQPVLGGESKIENTIQQSE 91 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 D + + + + G+++ + D +F+ + + + + Sbjct: 92 NIDKKTMYEDVKEFVDKNQLNTTIDIAQDENGVVLQLRDN---ILFESGKADLIDGSSEI 148 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRI 309 L KI +++ I I GHTD P +DNW LS RA + + + G R Sbjct: 149 LDKINTLISTLPNSIVIEGHTDNVPISTSIYKDNWDLSTARASNVLRYFTQLKGQDPTRF 208 Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 S G+ +R K+ + + NRR++IL+ Sbjct: 209 SAA-GYGEYRPKVDNSTDENRAQNRRVNILIVSNN 242 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF-GKNLM 77 +K + W Y+D +T+LM FF++++ ++ D +AI Q F+ GK+ Sbjct: 3 RKKKSSNNELTGDEWLGTYSDCVTLLMTFFVLLYSMSTVDAQKVQAISQAFSIMSGKSTD 62 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEH 105 + + + + P ++KI+ +I + Sbjct: 63 SILQYDMYQGSQPVLGGESKIENTIQQS 90 >gi|86751586|ref|YP_488082.1| hypothetical protein RPB_4488 [Rhodopseudomonas palustris HaA2] gi|86574614|gb|ABD09171.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] Length = 341 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 103/338 (30%), Gaps = 16/338 (4%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + + N + + + L++ FLV+ + + K Q N Sbjct: 5 RGRRQETGFNYWPGFVDALSTLILGIVFLLSVFLVVQFFLSQEVTGKDKALQELNARIAQ 64 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 L + E ++ V + Sbjct: 65 LNDLLSLEKLGKLDIEEQLSQVRAGLSAAQSERDRVKGLYDGLAGAGSDAAGRAGELGKA 124 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + +L + + + ++ + + + +RL Sbjct: 125 LESEKQLSARALAQVEVLNQQISALRRQLAALEEALEATERRDKESQGRIADLGQRLNLA 184 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + LS ++ + R I I ++ FD ++ LPE L Sbjct: 185 LAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDTGQALLLPEGRAELD 244 Query: 254 KIGEVL--------AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 K+ L + V+ + GHTD P + + NW LS RA S Q L+ GV Sbjct: 245 KLAAALTELDKKIPSEIPWVLRVDGHTDRRPITGVFKSNWELSSARAISVVQYLVSLGVP 304 Query: 306 EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 R+ GFA + ++ + NRRI++ + +R Sbjct: 305 AQRLVAA-GFAEFQPLDTANTDEAYRRNRRIELKLTER 341 >gi|188996771|ref|YP_001931022.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931838|gb|ACD66468.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 264 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 8/153 (5%) Query: 189 KKRLQDLAKKISSTLSGLVAD-NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 K++ +D KKI + ++ N+ V E G+ I I+D +F S+ E Sbjct: 76 KQKREDAKKKIKERVEQIIKKLNLEGKVSVEVIPMGVRIRILD---YILFPPCSTEINQE 132 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVS 305 +L I EV+ + + + GHTD P NW LS RA + + L+ +G Sbjct: 133 YKELLNGIAEVIKEAKLPVEVEGHTDDIPPGPTCIYPSNWELSASRAAAVVRYLITAGNL 192 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 + G+A + ++ NRRI+I Sbjct: 193 PPYLFSAVGYADTKPISPNNSELGRKLNRRIEI 225 >gi|225849164|ref|YP_002729328.1| chemotaxis protein MotB [Sulfurihydrogenibium azorense Az-Fu1] gi|225643203|gb|ACN98253.1| chemotaxis protein MotB (Motility protein B) [Sulfurihydrogenibium azorense Az-Fu1] Length = 265 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 10/191 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 D +K ++ S P + + + KR+ + + +++ + L Sbjct: 41 DKKKLASFVEAISAAFSFKPISTSAPPSIIEGVGVKQKREDTKKKIKERVEQIVKKL--- 97 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 N+ V E G+ I I+D +F+ S E +L + EV+ + + + Sbjct: 98 NLEGKVQVEVIPMGVRIRILD---YILFNPCSVEIKKEYQELLSSVAEVIKEANLPVEVE 154 Query: 270 GHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 GHTD P NW LS RA S + L++S + G+A R + Sbjct: 155 GHTDNIPPSGNCIYPSNWELSAARAASVVRFLIQSKNLPPAMFTAVGYADTRPIAPNTSE 214 Query: 328 --NSANRRIDI 336 S NRRI+I Sbjct: 215 IGRSMNRRIEI 225 >gi|39998119|ref|NP_954070.1| chemotaxis MotB protein [Geobacter sulfurreducens PCA] gi|39985064|gb|AAR36420.1| chemotaxis MotB protein [Geobacter sulfurreducens PCA] Length = 266 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 78/224 (34%), Gaps = 8/224 (3%) Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 Q + I + S + + + SI + K Sbjct: 38 GQSDKEKIEQVMQSMRESFGFTATGSAPRPAVLDSSDMRIMPSIAPDLTNKGRGQGKNAD 97 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + +D SS + L+ V R G+++S+ + FD S+I Sbjct: 98 SKGRIRATEKDFQAIKSSIEAYLIKQGAQDKVNVGINRRGLVVSLKEA---GFFDSGSAI 154 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK- 301 +L K+ E L+ + + + GHTD P + NW LS RA + L + Sbjct: 155 VKESAYPLLAKVAESLSAYSNPVRVEGHTDTMPISSVQFPSNWELSTARATNIVHFLTRS 214 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 IS GF +R ++ NRR+DI++ +G Sbjct: 215 YDFDPGAISAA-GFGEYRPIADNNTAEGRSKNRRVDIVLLSGEG 257 >gi|116694193|ref|YP_728404.1| flagellar motor protein MotB [Ralstonia eutropha H16] gi|113528692|emb|CAJ95039.1| Chemotaxis protein [Ralstonia eutropha H16] Length = 321 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 3/200 (1%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + + L K + P +++ + +RL+ L +++ + Sbjct: 75 EKSSQTPSVIPGGGQDALRKDGDTMRARTNEPSDEQRRNEQQEAQRLRALKQRLEQIIEN 134 Query: 206 -LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 V +L + T G+ I I+D +N PMF S+ +L++IG VL Sbjct: 135 NPVLRQFRPQLLLDITSEGLRIQILDTQNRPMFRTGSATVETYMRTILREIGPVLNELPN 194 Query: 265 VISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 +S+ GHTDA+ + N NW LS DRA ++ + L+ G+ E ++ ++ G A Sbjct: 195 KVSLSGHTDAANYSNGERTYSNWELSGDRANASRRELIAGGMQEGKVLRVLGLAATMPLD 254 Query: 323 ASDPMNSANRRIDILVEDRQ 342 D + NRRI I+V + + Sbjct: 255 KEDLLAPVNRRISIVVLNHK 274 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 1/119 (0%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + + II+++ P+ SWKI YADFMT +MA FLV+W++++ + T + I +YF Sbjct: 5 HDMRPIIVRR-AKSHARPHGNHSWKIAYADFMTAMMALFLVLWLLSSANKKTLEGIAEYF 63 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 K + + + Q+ + D + + N++++ QRL Sbjct: 64 RMPLKVAIVGGEKSSQTPSVIPGGGQDALRKDGDTMRARTNEPSDEQRRNEQQEAQRLR 122 >gi|224825740|ref|ZP_03698844.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002] gi|224601964|gb|EEG08143.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002] Length = 271 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 10/188 (5%) Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 T ++ + + + +K + RL LA + + LV V Sbjct: 66 QTTPPTGGANTMIEVAQNKPVAKAVKGEQQLKEQARLGSLASDLQKVMEPLVKGG---QV 122 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275 + G+ I I D +F + + P P+++ VL ++ +VL+ I++ G TD Sbjct: 123 KITQSPKGVTIEIRDS---ALFPIAQAQPAPQSLQVLAQMAKVLSQVDNPITVEGFTDNI 179 Query: 276 PFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 P RN NW LS RA S ++ +++G++ R+ + G A + + NR Sbjct: 180 PIRNTFYPSNWELSAARAGSVVRLFVENGIAPARLVAV-GRAENLPVADNTSEEGRASNR 238 Query: 333 RIDILVED 340 R+ I V Sbjct: 239 RVSITVRS 246 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 59/167 (35%), Gaps = 9/167 (5%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ +D N W + YADF+T+L AFF+VM+ I++ ++ + + + Sbjct: 3 RRRRSEDEHENHERWLVSYADFITLLFAFFVVMYAISSVNEGKYRVLSSAI----VDAFR 58 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHIT-----KNSVDLKIGSTNQKKQYQRLENNIFY 133 I + PP + I+++ ++ + + + + + Q++ + Sbjct: 59 TGTTISLQTTPPTGGANTMIEVAQNKPVAKAVKGEQQLKEQARLGSLASDLQKVMEPLVK 118 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + ++ K + + LS+ Sbjct: 119 GGQVKITQSPKGVTIEIRDSALFPIAQAQPAPQSLQVLAQMAKVLSQ 165 >gi|308066932|ref|YP_003868537.1| chemotaxis motB protein (Motility protein B) [Paenibacillus polymyxa E681] gi|305856211|gb|ADM67999.1| Chemotaxis motB protein (Motility protein B) [Paenibacillus polymyxa E681] Length = 275 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 106/326 (32%), Gaps = 73/326 (22%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + SW + Y+D MT+L+A F+V++ +++ D + + Q + Sbjct: 3 KKRHEPHEEHADESWLLPYSDLMTLLLALFIVLFGMSSLDAKKFETMAQSLSAAFN---- 58 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 G+ D SSQ+ E +++ ++ +KQ + E Q Sbjct: 59 GGTGVLDHSA-ANPSSQSMDMGKNKEQVSQPVKSKATSTSELQKQLAQREEEDLKKLKKQ 117 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 ++ +N+ K + S N L + ++ A+K Sbjct: 118 MDQYIQNNGLTPLLNTKLNQSQLMITISDN--------------ALFSSGQAEVKPEARK 163 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 ++ ++S ++ V+ + IS Sbjct: 164 LAKSISSMLQQFPGYDVIVSGHTDNVPIS------------------------------- 192 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317 + N+ LS R+ + ++L+ + + + I G+ Sbjct: 193 -------------------NSQFPSNFDLSAKRSLNFLRILLLNPDLDPTKFVSI-GYGE 232 Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341 +R ++ S NRR++I V + Sbjct: 233 YRPLASNQDGQGRSKNRRVEISVLRK 258 >gi|110635517|ref|YP_675725.1| hypothetical protein Meso_3188 [Mesorhizobium sp. BNC1] gi|110286501|gb|ABG64560.1| OmpA/MotB [Chelativorans sp. BNC1] Length = 343 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 106/345 (30%), Gaps = 29/345 (8%) Query: 18 KKKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFN 70 +++ D + D T+L+A F+V + + + N Sbjct: 7 RRRERTVDYWPG-------FVDALATLLLAIMFLLSVFVVAQYFLSREISGRDEALDRLN 59 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 L E D ++ + + S + Sbjct: 60 AQINELTQLLALEKANFQDAEDQIATLRASLADAEAEQSRLQQILSSGAGSEAAANERIG 119 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 Q+ + + +L++ + + ++ + + Sbjct: 120 ELTGELDQERQISQRALSQVELLNQQISALRQQIAALEDALEASERRDRESNTKIADLGR 179 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPET 248 RL + L+ +D + + R I I ++ +F ++ P Sbjct: 180 RLNVALAQRVQELNRYRSDFFGRLREILSDREDIRIVGDRFVFQSEVLFASGATEINPNG 239 Query: 249 IVVLQKIGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQV 298 ++K+ + V+ + GHTD P RDNW LS RA + + Sbjct: 240 QEEMRKLAGAILELQREIPPEINWVLRVDGHTDNIPLSGTGRFRDNWELSTARAVAVVKF 299 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 L++SGV +R+ GF + + + NRRI++ + +R Sbjct: 300 LIESGVPAERLVAA-GFGEFQPLDPENTTEARSRNRRIELKLTER 343 >gi|260574379|ref|ZP_05842383.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] gi|259023275|gb|EEW26567.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] Length = 280 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 94/310 (30%), Gaps = 62/310 (20%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 +WK+ YADF+T +MAFFL+MWI+ AT + +K + YF+P + G Sbjct: 31 AWKVAYADFVTAMMAFFLLMWILGATTEKQRKGVADYFSPTIPINRVSGGGEGMFGGDSV 90 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 S Q + + N + Q ++ Sbjct: 91 FSEQTMPQSGTGASDRSPTEQNQARGENADAEAQAAAQIASVEKALTALGGESMTMEAAL 150 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 L I + L + + L+D+AK ++ L Sbjct: 151 RHVVTKVTDEGLVIEIFDLQEAPLFAEGTDDP-----QPVLRDIAKMLAEVL-----GLA 200 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 V I +ID + Sbjct: 201 SNSVAVNGYVKAYPIMMIDNPVWDL----------------------------------- 225 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331 S RA + ++ +G+ +R+ +ISG+A H+ +DP N Sbjct: 226 ----------------SAARAQAMRDLIQTAGLPANRVQRISGYADHKPV-TADPTAIRN 268 Query: 332 RRIDILVEDR 341 R+++++ R Sbjct: 269 NRVEVILLRR 278 >gi|86359103|ref|YP_470995.1| hypothetical protein RHE_CH03512 [Rhizobium etli CFN 42] gi|86283205|gb|ABC92268.1| probable outer membrane protein [Rhizobium etli CFN 42] Length = 343 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 100/315 (31%), Gaps = 15/315 (4%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 + L+ F+V I + + + + N L + + N Sbjct: 30 IMFLLTVFVVGQFILSREITGRDEVLNRLNSQINELTQLLALEKGSNQDLQDAVANLQAS 89 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 ++ + + + + + + +Q + + +L++ + + Sbjct: 90 LATAEGDRSRLQALLNAGSGGQDAAQKRIGAMTQELDEQKQVSERALSQVELLNQQIAAL 149 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 ++ + RL L+ +D + + Sbjct: 150 RSQIAAVEAALQASEEKDRVSQTKIADLGSRLNVALAARVQELNRYRSDFFGRLREILSD 209 Query: 221 RTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRG 270 R I I ++ +F + P+ + K+ L V+ + G Sbjct: 210 RENIRIVGDRFVFQSEVLFPSGGADLNPDGQTEMAKLAAALLDLAKEIPPEINWVLRVDG 269 Query: 271 HTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 HTD P RDNW LS +RA S + L+ GV DR+ GF + D + Sbjct: 270 HTDNVPLAGTGRYRDNWELSSERAISVVKFLIGQGVPADRLVAA-GFGEFQPIAPGDTPD 328 Query: 329 SA--NRRIDILVEDR 341 + NRRI++ + ++ Sbjct: 329 ARATNRRIELKLTEK 343 >gi|257095366|ref|YP_003169007.1| flagellar motor protein MotD [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047890|gb|ACV37078.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 276 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 7/187 (3%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 S+ + K ++K+ + + L + V Sbjct: 60 PVNSSGQTPMVVPTPASVTKASLASKAQEAVKQKQREKMRNVAKEILEVMAPLIEQGKVR 119 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 T G+ I I D +F ++ P+ I +Q + EVL + I+I GHTD P Sbjct: 120 VLETSRGVTIEINDS---ILFSPGQAVLQPQLIKAMQSVAEVLVAADFPITIEGHTDNVP 176 Query: 277 FRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRR 333 +N NW LS RA + ++ +G++ R++ I G+A R + + NRR Sbjct: 177 IKNTQFPSNWELSAVRATTVLRLFADAGIAAGRLTAI-GYADTRPVEPNLLADGRARNRR 235 Query: 334 IDILVED 340 + IL++ Sbjct: 236 VSILIDS 242 >gi|262198644|ref|YP_003269853.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262081991|gb|ACY17960.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 637 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 93/272 (34%), Gaps = 22/272 (8%) Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 DE PE + D+ + D + Q + + Sbjct: 370 DEDGCPELDNDGDGIPDEDDACPEQPEDFDGWEDDDGCPDQNDFDRDGDGILDDDDQCPD 429 Query: 145 NSLTRDSEKGKDLCKSTDLEKSI----------NKEENYFLPPLSKEKILAMKRKKRLQD 194 +D + +D C D + + E+ R + L + Sbjct: 430 EPEDKDGFEDEDGCPDPDNDGDGILDVDDLCLNDPEDFDNFEDEDGCPDHDNDRDRILDE 489 Query: 195 LAKK-ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + + D+ T + I I+D+ F+ +S+ E+ +L Sbjct: 490 DDQCPLEPETYNGNRDDDGCPDSGRVVVTDVSIDILDK---VYFEFNSANIKRESFPILD 546 Query: 254 KIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + + ++ I GHTDA A N RLS +RA S L+K GV DR+ Sbjct: 547 AVAATIMGNPDIRLIEVQGHTDAR---GSASYNLRLSDERAKSVRAYLLKKGVEPDRVDA 603 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 G+ + +S+ ++ NRR++ L+ +R Sbjct: 604 -KGYGETKPIDSSNTEKAHATNRRVEFLIMNR 634 >gi|209965120|ref|YP_002298035.1| hypothetical protein RC1_1826 [Rhodospirillum centenum SW] gi|209958586|gb|ACI99222.1| chemotaxis MotB protein, putative [Rhodospirillum centenum SW] Length = 344 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 108/334 (32%), Gaps = 29/334 (8%) Query: 30 LGSWKIVYADFMTVLMAFFLVM-WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88 W + +++ FL++ +++ + + + Sbjct: 18 WPGWVDALSSL--LMVIVFLLLVFVLAQV----YLSSALQGRDRQLAEVNRRIAELADML 71 Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 ER + + + + + L G Q + + S Sbjct: 72 ALERETSGGLRADVAQLTDRLRSTLARGEQLQADIAALAGERDALAAREAGLKGSVESER 131 Query: 149 RDSEKGKDLCKSTDLEKSINKEE-NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 ++ + + + + + +E+ L + +++ ++ DL +++ L+ V Sbjct: 132 ALGDEARAQVELLNQQVAALREQLARVAAALEVSEGKGREQEAQIADLGNRLNVALADKV 191 Query: 208 ADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLPETIVVLQKIGEV 258 + F L D R + +F S L ++ E Sbjct: 192 TELARYRSEFFGRLREALGERDDVRVVGDRFVFQSEVLFGSGSVELGEAGKERLSRLAET 251 Query: 259 LAH--------STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L V+ + GHTD+ P R+ NW LS RA + + L+ G+ DR+ Sbjct: 252 LKEIAARVPPEVDWVLRVDGHTDSVPIRSARFPSNWELSTARATAVVKYLIDQGIPADRL 311 Query: 310 SKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 +GF ++ + NRRI+I ++ R Sbjct: 312 -AAAGFGQYQPLDPGTSAEALARNRRIEIKLDAR 344 >gi|226225701|ref|YP_002759807.1| chemotaxis MotB protein [Gemmatimonas aurantiaca T-27] gi|226088892|dbj|BAH37337.1| chemotaxis MotB protein [Gemmatimonas aurantiaca T-27] Length = 289 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 82/154 (53%), Gaps = 3/154 (1%) Query: 188 RKKRLQDLAKKI-SSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPL 245 ++ + + + I + + V + T+ G+ I +++ +R F SS Sbjct: 101 EQRTFEQMRQAILDKLATSDSLKRLNAQVDVQVTQEGLRIELVESERGDVYFPIGSSQMN 160 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGV 304 T++ LQ IG+ L+ + + I GHTDA+PF A NW LS DRA +A +VL +G+ Sbjct: 161 SATVLTLQLIGQELSPIAQSLIIEGHTDAAPFGRDASYTNWELSADRANAARRVLQAAGI 220 Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 RIS++ G+A + ++ +DP ANRRI +L+ Sbjct: 221 DPKRISEVRGYADTKPRVINDPKAPANRRISVLI 254 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 12/168 (7%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 SWK+ YADF+T +MAFF+VMWI+ DD TK+AIE YF G Sbjct: 26 SWKVAYADFVTAMMAFFMVMWILG-MDDKTKQAIEGYFANPVGYKKGYGAG--------- 75 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 S S + ++ + + + ST Q+ Q + + L+ S + + Sbjct: 76 --SSPLGTGSAVNALQRSPMRMIVRSTEQRTFEQMRQAILDKLATSDSLKRLNAQVDVQV 133 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + + E+ S + + L +A+ + Sbjct: 134 TQEGLRIELVESERGDVYFPIGSSQMNSATVLTLQLIGQELSPIAQSL 181 >gi|146282902|ref|YP_001173055.1| flagellar motor protein MotD [Pseudomonas stutzeri A1501] gi|145571107|gb|ABP80213.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501] Length = 278 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 7/178 (3%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 ++ + L L + S + I Sbjct: 70 EERPRTTEPDVSQVEDLTGPASGEPTLDPLERIAQSMRETFGELIANDQLTIRGNELWIE 129 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DN 284 I + ++ +F ++P + ++ K+ +LA + + G TD P N Sbjct: 130 IEL---SSSLLFPSGDALPNDQAFQLIDKVAGILAPFDNPVHVEGFTDNLPISTDKFPTN 186 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 W LS RA S ++L GV+ R++ + G+ + + + NRR+ ++V Sbjct: 187 WELSAARAGSVVRMLAAQGVNPSRLAAV-GYGEFQPVADNATAEGRARNRRVVLVVSR 243 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 40/116 (34%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K + + + Sbjct: 3 RRRAPEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSDSLVGVFNQVDRS 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 K I + P + + + L + + I Sbjct: 63 VKPIPIGEERPRTTEPDVSQVEDLTGPASGEPTLDPLERIAQSMRETFGELIANDQ 118 >gi|134298231|ref|YP_001111727.1| OmpA/MotB domain-containing protein [Desulfotomaculum reducens MI-1] gi|134050931|gb|ABO48902.1| OmpA/MotB domain protein [Desulfotomaculum reducens MI-1] Length = 236 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 71/156 (45%), Gaps = 12/156 (7%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 LQ+L K++ + +N+ V + ++I D+ +FD S++ P++ Sbjct: 85 ELQELKKQLDQYIKE---NNMTTEVETNIINNHLTLTIRDR---ALFDSGSAVVKPQSRK 138 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPF-RNIARDNWRLSLDRAYS-AYQVLMKSGVSED 307 +++ +G +L + + + GHTD P N NW LS RA + +L + Sbjct: 139 IIKAMGSILQQYPKFEVLVAGHTDNQPIYNNTFESNWDLSSKRALNCMKIMLTNKNLDPR 198 Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 R+ I G+ +R + + NRR+++++ + Sbjct: 199 RLVAI-GYGEYRPIAENTTTEGRAKNRRVEVIINQK 233 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 36/90 (40%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + SW I YAD +T+L+A F+V++ + D+ A+++ N + Sbjct: 3 KHREQHEEHIDESWLIPYADLLTLLLALFIVLFASSTIDNQKFNAMKESLNAALNSGAGI 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 + +++ + + + K Sbjct: 63 MESKSLSDQLIDKTEVKTDTVVELQELKKQ 92 >gi|75676928|ref|YP_319349.1| hypothetical protein Nwi_2744 [Nitrobacter winogradskyi Nb-255] gi|74421798|gb|ABA05997.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255] Length = 342 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 111/346 (32%), Gaps = 31/346 (8%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + + N + + + L+ FLV + + K + N Sbjct: 5 RGRRNESGFNYWPGFVDALSTLVLAIVFLLTVFLVTQFFLSQEVTGKDKALEQLNARIAQ 64 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + D + + + D S + + N Sbjct: 65 -------LTDLLSLEKLGKVSLGDEVSQLRAGLASAEAERDRIKGLYDGLAGAGNDAAGR 117 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 +SQ ++ + S + T ++ ++ L + + + R+ DL Sbjct: 118 DSQLNKALDSEKQISSRALAQVEVLTQQISALRRQLAALENALDASEKKDKESQNRIADL 177 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLP 246 ++++ L+ V + F IL + D R + FD + + LP Sbjct: 178 GQRLNVALAKRVQELSRYRSEFFGRLRAILGNRPDIRIVGDRFVFQSEVFFDTAQATLLP 237 Query: 247 ETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297 E L K+ L + V+ + GHTD P ++ + NW LS RA S Q Sbjct: 238 EGKAELDKVAGALTDLDKQIPSEIAWVLRVDGHTDVRPIKSPVFKSNWDLSAARAISVVQ 297 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 L GV R+ GF + + NRRI++ + +R Sbjct: 298 YLASLGVPPQRLVAA-GFGEFQPLDPDATEEAYKRNRRIELKLTER 342 >gi|163856411|ref|YP_001630709.1| flagellar motor protein MotB [Bordetella petrii DSM 12804] gi|163260139|emb|CAP42440.1| flagellar motor component MotB [Bordetella petrii] Length = 312 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 3/198 (1%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GL 206 + ++ ++ ++ + + + + L+ L +++ S L Sbjct: 77 SAETSAIPGGGSDPLRDEGEVRKSDGSRVQSQVQSDAERRDRHALERLKRRLDSMLEENP 136 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 V N +L + T G+ I I+D + PMF S+ P +L+++G VL I Sbjct: 137 VLKNFRPQLLIDMTTEGLRIQIVDNQKRPMFATGSAEVQPYMRDILRELGPVLNELPNKI 196 Query: 267 SIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 SI GHTDA+ + A NW LS DRA ++ Q L+ G++E ++ +I G + + Sbjct: 197 SIAGHTDATQYARGERAYSNWELSADRANASRQELVAGGMAEGKLMRIQGLSSSMSLVKD 256 Query: 325 DPMNSANRRIDILVEDRQ 342 DP + NRRI ++V +R+ Sbjct: 257 DPYAAVNRRISLVVLNRR 274 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 78/195 (40%), Gaps = 2/195 (1%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 N + +I ++ P++ GSWKI YADF+T +MAFFLVMW+I+ + + + +YF Sbjct: 5 NNHRVVI--RRKRGGSRPHHGGSWKIAYADFITAMMAFFLVMWLISIVPKEELRGLAEYF 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + +T E + + + + + S ++ +++ + Sbjct: 63 RMPLRVALTGGPNYSAETSAIPGGGSDPLRDEGEVRKSDGSRVQSQVQSDAERRDRHALE 122 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + +S E+ R + ++ N++ F ++ + Sbjct: 123 RLKRRLDSMLEENPVLKNFRPQLLIDMTTEGLRIQIVDNQKRPMFATGSAEVQPYMRDIL 182 Query: 190 KRLQDLAKKISSTLS 204 + L + ++ + +S Sbjct: 183 RELGPVLNELPNKIS 197 >gi|54297693|ref|YP_124062.1| flagellar motor protein MotD [Legionella pneumophila str. Paris] gi|53751478|emb|CAH12896.1| hypothetical protein lpp1744 [Legionella pneumophila str. Paris] Length = 273 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 75/185 (40%), Gaps = 7/185 (3%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 ++ KS +++ S + I +K+ + K L+ +++ Sbjct: 56 SEGMKSAFNQKDQNKATQSTDNIKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQ 115 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280 + I D + +FD S+ PE ++ L K+ E + + + + G+TD P Sbjct: 116 EGWVEI---DIKAGSLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDNVPIETP 172 Query: 281 AR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 NW LS RA + ++L G++ RI ++G+ + NRR++IL Sbjct: 173 QYPSNWELSAARAATVGRILNGFGIANHRIL-VTGYGDQYPITDNYTEAGRSQNRRVNIL 231 Query: 338 VEDRQ 342 + + Sbjct: 232 ITKNR 236 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 46/144 (31%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K + + + W + YADF+T+L AFF+VM+ I++ + K++ + Sbjct: 7 MKSRQKKTEEHQDSHRWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQK 66 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 + + D N ++ + K Q I + Sbjct: 67 DQNKATQSTDNIKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAG 126 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKS 160 S + K L + Sbjct: 127 SLFDSGSADIKPEALIKLMKLAEK 150 >gi|148559624|ref|YP_001259565.1| hypothetical protein BOV_1656 [Brucella ovis ATCC 25840] gi|148370881|gb|ABQ60860.1| OmpA/MotB domain [Brucella ovis ATCC 25840] Length = 314 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 98/257 (38%), Gaps = 18/257 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC--KNSLTRDSEKGKDLC 158 S + +T+ + S + + L+ ++ + + + + K Sbjct: 60 SQIQELTQLLSLERSNSQDMQDTIANLQASLSTVESERSRLQSLLNEGSGAGAAAEKRAG 119 Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 + + + L + ++++ LA+++ L+ +D + Sbjct: 120 ELAQSLDAEKQVSARALNQVELLNQQIAALRRQIAALAQRV-QELNRYRSDFFGRLREIL 178 Query: 219 TTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISI 268 + + I I ++ +F S+ P+ V ++K+ + + V+ + Sbjct: 179 SDKENIRIVGDRFVFQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIPDDINWVLRV 238 Query: 269 RGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 GHTD P RDNW LS RA + + L+ +GV +R+ GF ++ ++ Sbjct: 239 DGHTDNVPLAGTGRFRDNWELSSARATAVVKFLIANGVPANRLVAA-GFGEYQPLDTANT 297 Query: 327 --MNSANRRIDILVEDR 341 + NRRI++ + +R Sbjct: 298 ADARARNRRIELKLTER 314 >gi|209543669|ref|YP_002275898.1| hypothetical protein Gdia_1504 [Gluconacetobacter diazotrophicus PAl 5] gi|209531346|gb|ACI51283.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 326 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 109/349 (31%), Gaps = 51/349 (14%) Query: 19 KKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNP 71 ++ L +W Y D T+LM F++ + + ++ Sbjct: 3 RRRRQTH--AGLDAWPG-YVDALSTLLMVIIFVLLVFVLGQAFLSVVLNKRQQAMDQLAH 59 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 L D+ E +S+ L + S + Sbjct: 60 QVAQLN---------------------DMLSLERGQNHSLQLSVASLRAAHEKDAAMETS 98 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 +Q + N + + + + ++ + + L + R ++ Sbjct: 99 LTAQVAQTTAERDNQAHLAQASQQQVTDLGSQLEQLRQQLSAAMAVLDISQNEIRDRDRK 158 Query: 192 LQDLAKKISSTLSGLVADNIV---------KGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + DL K++ L+ V + +L ++ ++ +F + Sbjct: 159 IDDLGLKLNVALADKVEQLQRYRSEFFGRLRDILQNQDGVQVVGDRFVFQSEVLFPPGGA 218 Query: 243 IPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 P+ I ++ + ++ + GH D P + NW LS RA + Sbjct: 219 ELSPKGIADIRALARTFHQVSAQIPASIPWILRVDGHADRQPIHSAFASNWELSSARAIT 278 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 ++L+ G+S + +GFA + + + NRRI+ + DR Sbjct: 279 VVKLLIAEGISPHHL-AATGFADFQPLDTHETPAAFARNRRIEFRLTDR 326 >gi|309388829|gb|ADO76709.1| OmpA/MotB domain protein [Halanaerobium praevalens DSM 2228] Length = 282 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 8/161 (4%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + +++ + + + + +N+ V E R G++IS+ +++ + Sbjct: 82 QDYAQAPENIQQVMKQIDNYIENNNLSDKVNVENKRKGLVISLT---GEILYELGKADIR 138 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSG 303 + VL KI E+L I I GHTD P R NW LS RA + + L+ + Sbjct: 139 EQGKEVLTKISEILKEIPNDIMIEGHTDDLPIRTAEFPSNWELSTARAVNVIKYLIEEKD 198 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 R+S G++ +R ++ + NRR++++V + Q Sbjct: 199 FDPARLSAA-GYSEYRPVATNNSTEGRAENRRVEVVVLNSQ 238 Score = 39.6 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 27/69 (39%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 KK + D+ +W + D MT+L+ FF++++ ++ D + + L Sbjct: 5 KKNKSDGDSGGGSPAWMTTFGDMMTLLLVFFVLLFSFSSMDVEKFQGFISALQNQLGVLQ 64 Query: 78 TASKGIFDE 86 D Sbjct: 65 GGKTITEDP 73 >gi|225874275|ref|YP_002755734.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196] gi|225793995|gb|ACO34085.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196] Length = 270 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 2/153 (1%) Query: 188 RKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 +K+ ++++ +IS + + + + V T G+ I +++ + FD SS Sbjct: 83 KKQDIRNIKTQISEAMHAQIQLKALQNHVNMVVTPEGLRIELLEAKGGTFFDSGSSKLSA 142 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVS 305 +L+ + + L I+I G+TDA P+ NW LS DRA +A +++ SG+ Sbjct: 143 GGKEMLKLLAQQLGGVPNRITIEGYTDAKPYPGKDGYTNWDLSADRANAARRLMQASGLH 202 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 +++++ G+ L++ + P + NRRI I+V Sbjct: 203 AGQVAEVRGYGDQNLRLPNKPFDPTNRRITIVV 235 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 + II+ +K ++ G+WK+ YADF+T +M+ F+V+W++N + K I YF Sbjct: 4 HRPIIVIRKKVS-HGGHHGGAWKVAYADFVTAMMSLFIVLWLMNTSTPIK-KIIAGYFRD 61 Query: 72 FGKNLMTASK 81 N Sbjct: 62 PKSNSALTGN 71 >gi|91976556|ref|YP_569215.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] gi|91683012|gb|ABE39314.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] Length = 273 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 64/321 (19%), Positives = 108/321 (33%), Gaps = 62/321 (19%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + + W + +AD LMA L +++ A K + + Sbjct: 3 KKKREEAHGGHGWFVTFAD----LMALLLAFFVM-------LVAFSTQDKDKLKIVAGSM 51 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 + F QN S + D KN+ + + K + + Sbjct: 52 REAFGVQNDSRYSGIIENDGLPTRGKVKNTEHVNPELSTSKPAPGEVTRDEGV------- 104 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 N +E S A++ + +L+K Sbjct: 105 ---------------------------NTKEEREFALASASLRQALQDLPEISELSKN-- 135 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 V+FE T+ G+ + I+DQ MF S P T ++LQ++ L Sbjct: 136 --------------VMFEETKQGLNLEIMDQDGRAMFADGSKAPFERTRLLLQRLAAPLR 181 Query: 261 HSTEVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + +SI GHT A + N + LS DRA Q+L + G+ I ++G A + Sbjct: 182 ATPLRVSIVGHTSAGSVSQRSDYNGFDLSADRANVVRQILEREGLPVSHIFAVTGKADTQ 241 Query: 320 LKIASDPMNSANRRIDILVED 340 DP +ANRR+ I + Sbjct: 242 PLFPEDPSIAANRRVTITLMR 262 >gi|238758125|ref|ZP_04619305.1| hypothetical protein yaldo0001_12650 [Yersinia aldovae ATCC 35236] gi|238703663|gb|EEP96200.1| hypothetical protein yaldo0001_12650 [Yersinia aldovae ATCC 35236] Length = 364 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 8/223 (3%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK-----EK 182 + S Q ++ + T KS+D I + + + + Sbjct: 11 MWLLSVSSPQQLTQIAEYFRTPLKVALTSGDKSSDSTSVIPGGGDDPTQQIGEVRKHIDS 70 Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + K + RL L +K+ + + +L G+ I IID +N PMF S Sbjct: 71 EESRKEEYRLNKLREKLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGS 130 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299 + P +L+ I +L IS+ GHTD P+ NW LS DRA ++ + L Sbjct: 131 AQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYATGERGYSNWELSADRANASRREL 190 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + G+ + ++ ++ G A + NRRI ILV ++Q Sbjct: 191 LAGGLDDGKVLRVVGMASTMRLKEQTSDDPVNRRISILVLNKQ 233 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 31/77 (40%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 MT +MAFFLVMW+++ + I +YF K +T+ D + + Sbjct: 1 MTAMMAFFLVMWLLSVSSPQQLTQIAEYFRTPLKVALTSGDKSSDSTSVIPGGGDDPTQQ 60 Query: 101 SIDEHITKNSVDLKIGS 117 + +S + + Sbjct: 61 IGEVRKHIDSEESRKEE 77 >gi|222053743|ref|YP_002536105.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] gi|221563032|gb|ACM19004.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] Length = 258 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 8/168 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 P K K +D ++ + L+ V E R G+++S+ + Sbjct: 87 PQKAVKSGKTKSHAEEKDFKAVKAAIEAYLLKTGAQDKVSVEINRRGLVVSLKEA---GF 143 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295 FD S+I +L + E L + T + + GHTD P + NW LS RA + Sbjct: 144 FDSGSAIVQQSAYSLLAHVAESLVNYTNPVRVEGHTDNVPINSRTFPSNWELSTARATNL 203 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 Q L+K ++IS +GF +R + S NRR+DI++ Sbjct: 204 VQYLIKYYEFEPEKISA-TGFGEYRPVADNTTVDGRSKNRRVDIVLLS 250 >gi|148974248|ref|ZP_01811781.1| chemotaxis LafU protein [Vibrionales bacterium SWAT-3] gi|145965945|gb|EDK31193.1| chemotaxis LafU protein [Vibrionales bacterium SWAT-3] Length = 324 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 3/162 (1%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + ++ L+ LA++I+ LSG+ + + V T G + I D PMF Sbjct: 102 DTSVLQGEFNSQQELELLAQRITQELSGI---DALGSVSVFVTPQGAKLVIADSDKGPMF 158 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + + P +L + +L + + I GHTDAS ++ NW LS +RA SA Sbjct: 159 FRGGAKVTPFYQDLLLNLAGLLENIENKMIITGHTDASRYKGSRMTNWELSSNRANSARY 218 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 L K G+ E I +++G + + + NRRI++ + Sbjct: 219 YLNKGGLQERHIFQVTGMSDTAPVDYENTKSGINRRIELYIL 260 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 50/156 (32%), Gaps = 2/156 (1%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 Q II KK + + G WK+ AD M LM FLV+WI+ D D +K + YF Sbjct: 3 QPQIIIQKKGRRKRNELQHGG-WKVAMADLMISLMCLFLVLWILQVVDVDDQKKLLNYFA 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI-TKNSVDLKIGSTNQKKQYQRLEN 129 +M + + + N + G N +++ + L Sbjct: 62 YGNDPIMHLGTSESGGNSINPLPLPHVATSHYGADLHRINDTSVLQGEFNSQQELELLAQ 121 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 I + + + + S Sbjct: 122 RITQELSGIDALGSVSVFVTPQGAKLVIADSDKGPM 157 >gi|325294743|ref|YP_004281257.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065191|gb|ADY73198.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 233 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 5/148 (3%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + I L + GV E + G I + + +F S P ETI ++ Sbjct: 84 KTRRAIEQKLQEIHQMLKKMGVKSEIAKYGTSIRLRINTDK-LFPPGSEKPYKETIPLIM 142 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 ++ + L I+I GHTD P R+ NW LS RA S ++ ++ G ++S Sbjct: 143 EMCKKLKELELPITIEGHTDNVPIRSKIFPSNWELSAARAVSVLRLFIQCGYDPRKLSAA 202 Query: 313 SGFAHHRLKIASDP--MNSANRRIDILV 338 G +R + + NRRI+I++ Sbjct: 203 -GCGPYRPIAPNTTPEGRAKNRRIEIVI 229 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 33/73 (45%), Gaps = 3/73 (4%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK-KAIEQYFNPFGKNLM 77 +K + +W + D M++L+ FF++++ ++ + +AI+ FG + + Sbjct: 3 RKKKEECKAP--PAWLTSFGDLMSLLLTFFILLYSMSTISLEKFYQAIKGIIQAFGGHYV 60 Query: 78 TASKGIFDEQNPP 90 + + + P Sbjct: 61 IHEERVIQGKRIP 73 >gi|162146328|ref|YP_001600787.1| hypothetical protein GDI_0503 [Gluconacetobacter diazotrophicus PAl 5] gi|161784903|emb|CAP54446.1| putative outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] Length = 326 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 109/349 (31%), Gaps = 51/349 (14%) Query: 19 KKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNP 71 ++ L +W Y D T+LM F++ + + ++ Sbjct: 3 RRRRQTH--AGLDAWPG-YVDALSTLLMVIIFVLLVFVLGQAFLSVVLNKRQQAMDQLAH 59 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 L D+ E +S+ L + S + Sbjct: 60 QVAQLN---------------------DMLSLERGQNHSLQLSVASLRAAHEKDAAMETS 98 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 +Q + N + + + + ++ + + L + R ++ Sbjct: 99 LTAQVAQTTPERDNQAHLAQASQQQVTDLGSQLEQLRQQLSAAMAVLDISQNEIRDRDRK 158 Query: 192 LQDLAKKISSTLSGLVADNIV---------KGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + DL K++ L+ V + +L ++ ++ +F + Sbjct: 159 IDDLGLKLNVALADKVEQLQRYRSEFFGRLRDILQNQDGVQVVGDRFVFQSEVLFPPGGA 218 Query: 243 IPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 P+ I ++ + ++ + GH D P + NW LS RA + Sbjct: 219 ELSPKGIADIRALARTFHQVSAQIPASIPWILRVDGHADRQPIHSAFASNWELSSARAIT 278 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 ++L+ G+S + +GFA + + + NRRI+ + DR Sbjct: 279 VVKLLIAEGISPHHL-AATGFADFQPLDTHETPAAFARNRRIEFRLTDR 326 >gi|221635437|ref|YP_002523313.1| chemotaxis protein MotB (Motility protein B) [Thermomicrobium roseum DSM 5159] gi|221157647|gb|ACM06765.1| chemotaxis protein MotB (Motility protein B) [Thermomicrobium roseum DSM 5159] Length = 237 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 8/196 (4%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 ++ K ++ L + N + PP + + L+ + Sbjct: 41 QADLAKFRQVASSLRAAFNLDVLTAPPPGQSMVTPLEQDPRFNAYLSVRAQVASLFTRLG 100 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 +G E T GI+I + D +F + PE VL I ++ I + Sbjct: 101 LDRQGAEVELTSEGIVIHLSDA---ILFPPGQAELRPEAQRVLDGIAAIIEPLPNPIRVE 157 Query: 270 GHTDASPFR-NIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP- 326 GHTD++P DNW LS RA + + L +G+ R+S G+ R + +++ Sbjct: 158 GHTDSTPPPPGSYPDNWELSAMRAVNTVRYLTDVAGLPPQRLSAA-GYGEFRPRASNETV 216 Query: 327 -MNSANRRIDILVEDR 341 NRR+DI++ Sbjct: 217 EGRRKNRRVDIVIVQP 232 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 24/186 (12%), Positives = 60/186 (32%), Gaps = 5/186 (2%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN----- 70 + +++ + NL W I YAD +T+L+ FF+VM+ I+ D + + Sbjct: 1 MARRQRHHEGEHENLERWLITYADLITLLLIFFVVMYSISQADLAKFRQVASSLRAAFNL 60 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + + P ++ + + T+ +D + + + + Sbjct: 61 DVLTAPPPGQSMVTPLEQDPRFNAYLSVRAQVASLFTRLGLDRQGAEVELTSEGIVIHLS 120 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 L Q+E + + + + ++ PP S + + Sbjct: 121 DAILFPPGQAELRPEAQRVLDGIAAIIEPLPNPIRVEGHTDSTPPPPGSYPDNWELSAMR 180 Query: 191 RLQDLA 196 + + Sbjct: 181 AVNTVR 186 >gi|326792989|ref|YP_004310810.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427] gi|326543753|gb|ADZ85612.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427] Length = 240 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 76/196 (38%), Gaps = 8/196 (4%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 DS+K ++L S I + + ++ + + + + L Sbjct: 39 DSKKYEELAGSLSNSLGILQGGVGMSNANAAGTDSSIPFHQTISASQEIQTKLKDYLETH 98 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 ++ + V G+ +S D +FD + L +I ++L T + + Sbjct: 99 DLTEQVSLHVEPQGLTLSFDDN---ILFDSGKADIQSAYKKNLLEICDILKTFTNDVVVE 155 Query: 270 GHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDP- 326 GHTD P NW L+ RA + + + G + ++S IS + +R ++D Sbjct: 156 GHTDNLPIHTSQFSSNWELASIRAINVVHLFIDEGKLPASKLSAIS-YGEYRPIASNDTP 214 Query: 327 -MNSANRRIDILVEDR 341 + NRRIDI++ Sbjct: 215 EGRAKNRRIDIILLSS 230 Score = 77.3 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 4/92 (4%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + KKK + N W + Y+D +T+LM FF+VM+ ++ D + + + Sbjct: 1 MAKKKPKKE----NSERWLLTYSDLITLLMIFFVVMYSMSNVDSKKYEELAGSLSNSLGI 56 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107 L + S +S + I Sbjct: 57 LQGGVGMSNANAAGTDSSIPFHQTISASQEIQ 88 >gi|257092877|ref|YP_003166518.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045401|gb|ACV34589.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 189 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 65/165 (39%), Gaps = 11/165 (6%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 +++ L K + L + V + + ++++D+ F S+ Sbjct: 25 KQEVQQVDTLSVQNKAYAQLTQQLQTEIQADQVKIKQLEGRLTVTLVDEIV---FSSGSA 81 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFR----NIARDNWRLSLDRAYSAYQ 297 + + KI L ++ + G+TD +P + NW LS RA + Sbjct: 82 EMNMKGRATIDKIVGTLQNAAGKRIVVEGYTDNTPIGPGLRSRYPTNWELSTARACDVVR 141 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L +G+ R+ GF ++ A+D S NRRIDI++ D Sbjct: 142 YLQAAGIDPVRLEAA-GFGEYQPVAANDTPAGRSQNRRIDIVLMD 185 >gi|302342669|ref|YP_003807198.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075] gi|301639282|gb|ADK84604.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075] Length = 244 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 70/155 (45%), Gaps = 8/155 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + N+ V +++ + + +F+ SS P+ + VL Sbjct: 93 RQTDPIMQDIREVTDQKNLDDVVEVIDQGDKVILRV---KGQLLFNTGSSDINPQALGVL 149 Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + I +V+ + ++GHTD+ P + NW LS RA + + L++ GVS R++ Sbjct: 150 KAIADVVDRNPGWRLDVKGHTDSRPISSVKFASNWELSSLRATAVLRYLIEQGVSPSRLT 209 Query: 311 KISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343 +G+A + + + NRR++ ++E ++G Sbjct: 210 A-TGYADTQRLVPDSSEENMARNRRVEFVLEKQKG 243 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 4/112 (3%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83 DD W + YAD +T+L+ FF++M + D + + I + I Sbjct: 15 DDAGEEGREWLVTYADMVTLLLTFFVMMLSLARLDTERFEQIVTSIQYSLGASVAPGGRI 74 Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + ++ LS + + I +K + I Sbjct: 75 ----GRIDAHDTKRMSLSELTGRQTDPIMQDIREVTDQKNLDDVVEVIDQGD 122 >gi|317403796|gb|EFV84276.1| chemotaxis protein MotB [Achromobacter xylosoxidans C54] Length = 329 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 3/201 (1%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 S + ++ + + + + + RL++L K++ + Sbjct: 72 GGPSSSAETSAVPGGGRDPLRNDGDERRAQGNRVEAQPKGDAERRDQHRLENLKKRLENV 131 Query: 203 LSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + V + +L + T G+ I IID +N PMF + P +L+++G VL Sbjct: 132 IENSPVLKSFRPQLLIDMTTEGLRIQIIDNQNRPMFATGRAEVQPYMRDILRELGPVLNE 191 Query: 262 STEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 +SI GHTDAS + A NW LS DRA ++ Q L+ G++E ++ +I G + Sbjct: 192 LPNKVSISGHTDASQYARGERAYSNWELSADRANASRQELVAGGMNESKVMRIQGLSSSM 251 Query: 320 LKIASDPMNSANRRIDILVED 340 + DP + NRRI ++V + Sbjct: 252 SLVKDDPYAAVNRRISLVVLN 272 >gi|302341787|ref|YP_003806316.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075] gi|301638400|gb|ADK83722.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075] Length = 354 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 110/344 (31%), Gaps = 33/344 (9%) Query: 3 SHGDKNQENDQFIIIKKKV--AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 + N + I+ ++ A S+ + +D M +L+ FF++++ ++ Sbjct: 36 PRANANAADSDTIVRRRLRPLARFAQGEESPSFYLSLSDLMCLLLVFFVLIYSLS----- 90 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 + D+ P ++++ + + I + + Sbjct: 91 ------------------GHEKPTDQPGPAQQAAVEIAEPAEPAQIASAPAAPGLPNAQA 132 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + + + + + + + L++++ + + Sbjct: 133 APDDLSRAALALASAGQSDPALADQPAPQPTPEPQPVDRGVTLDRALLTMVSASTATPAD 192 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 L D + + A +G+ + ++I + + FD Sbjct: 193 AVATEENSLDSLLDQLRAAAGEGMPGAAGQPAEGLQITSAEGRLVIRLPENIT---FDLG 249 Query: 241 SSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV 298 ++ P L ++ V L + + + GHTD P NW LS RA + + Sbjct: 250 QALLKPVMAETLGRLAPVVLRNPQCQVIVTGHTDDLPISTAQFASNWELSAARAAAVARA 309 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L GV R+ I G A + +D NRR++I + Sbjct: 310 LTAHGVPAGRLH-IRGMADQSPLLPNDSPENRQQNRRVEIELRA 352 >gi|85714417|ref|ZP_01045405.1| flagellar motor protein [Nitrobacter sp. Nb-311A] gi|85698864|gb|EAQ36733.1| flagellar motor protein [Nitrobacter sp. Nb-311A] Length = 342 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 116/346 (33%), Gaps = 31/346 (8%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTV---LMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + + N + + + L++ FLV+ + + K + N Sbjct: 5 RGRRNESGFNYWPGFVDALSTLVLAIVFLLSVFLVVQFFLSQEVTGKDKALEQLNARIAQ 64 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + D + + + D S + + + N Sbjct: 65 -------LTDLLSLEKLGKVSLGDEVSQLRAGLASAEAERDRIKGLYEGLAGAGNDAAGR 117 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 NSQ ++ + + + T ++ ++ L + + + R+ DL Sbjct: 118 NSQLNKALDSEKQISARALAQVEVLTQQISALRRQLAALEDALDASEKKDKESQNRIADL 177 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLP 246 ++++ L+ V + F IL + D R + F+ + +I LP Sbjct: 178 GQRLNVALAKRVQELSRYRSEFFGRLRAILGNRPDIRIVGDRFVFQSEVFFETAQAILLP 237 Query: 247 ETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297 E L KI L + V+ + GHTD P + + NW LS RA S Q Sbjct: 238 EGKSELDKIANALTDLDKQIPSEIAWVLRVDGHTDVRPINSPVFKSNWDLSAARAISVVQ 297 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 L+ GV R+ GF + ++ NRRI++ + +R Sbjct: 298 YLVSRGVPPQRLVAA-GFGEFQPLDPGTTDDAYKRNRRIELKLTER 342 >gi|297538888|ref|YP_003674657.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301] gi|297258235|gb|ADI30080.1| OmpA/MotB domain protein [Methylotenera sp. 301] Length = 272 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 76/194 (39%), Gaps = 7/194 (3%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 + + +++ + + PL + + K ++ + + K + L Sbjct: 63 GAGHLKTNGSLNPNIKSKPQNQAGSLIKPLPLTYLYSEKMRREREAMTKMGIDLSNKLSP 122 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268 V GI I I D +F S+ VL +I ++ + +I + Sbjct: 123 LINDGKVRVMQNNRGIRIDINDSL---LFTPGSAELAAAASTVLSEIAPMIKDNDRLIQV 179 Query: 269 RGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 GHTD N NW LS RA S ++L +GV+E R+S + GF + ++ Sbjct: 180 EGHTDNIAIHNDLFYSNWELSAVRASSVVRMLSDTGVAESRLSAL-GFGSTQPITENNTE 238 Query: 328 --NSANRRIDILVE 339 + NRR+ I++ Sbjct: 239 LGRAKNRRVSIMIL 252 >gi|126443721|ref|YP_001061208.1| chemotaxis LafU protein [Burkholderia pseudomallei 668] gi|126223212|gb|ABN86717.1| chemotaxis LafU protein [Burkholderia pseudomallei 668] Length = 311 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 78/217 (35%), Gaps = 2/217 (0%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 N Q + D G +S + + + Sbjct: 50 MNVTPEKERKQVAAEIAGRPFFDGGVGIFEQRSRKPVVAPFDAQQPDRMRRRTSGAARER 109 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 LQ + + + V G+ I+I D MF++ S P Sbjct: 110 TIDSLQQRRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPP 169 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVS 305 I +L + VL T + I GHTDA+ + ++ +NW LS RA A QVL G+ Sbjct: 170 FIRLLTALVPVLGTVTNKMVIVGHTDATQYADASVFSNNWNLSSRRALRARQVLADGGMD 229 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 R+ +ISG + +P + NRR+++L+ + Sbjct: 230 AQRMFQISGMGDSVPAVPDNPNHDMNRRVELLLLTSR 266 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 64/173 (36%), Gaps = 5/173 (2%) Query: 5 GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 + II++ ++ G+WK+ +ADF LMA F+V+W++N T + +K Sbjct: 2 STNKESGHGPTIIRRAHKR-HEEHSGGAWKVAFADFTLALMALFMVLWVMNVTPEKERKQ 60 Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + G+ GIF++++ + D + + + + T Q Sbjct: 61 VAAEI--AGRPFFDGGVGIFEQRSRKPVVA--PFDAQQPDRMRRRTSGAARERTIDSLQQ 116 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 +R S+ + + + + +D + + + PP Sbjct: 117 RRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPP 169 >gi|89895779|ref|YP_519266.1| hypothetical protein DSY3033 [Desulfitobacterium hafniense Y51] gi|89335227|dbj|BAE84822.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 275 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 88/223 (39%), Gaps = 9/223 (4%) Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 Y + + + +S E G + +E + P E Sbjct: 36 YSMSKVDAEKFQSIAESLSVALGGGTRVEIGASPSGPSLIETYPTNKPQEGKEPEDGEGN 95 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE-TTRTGILISIIDQRNTPMFDKSSS 242 + I L ADN ++ L G++ISI D +F+ ++ Sbjct: 96 GDGTGADMENMTIETIKQKLDKFAADNGIETKLVSSIEERGLVISIQDTL---LFESGAA 152 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMK 301 + P+ +L KI VLA + I + GHTD P N NW LS+ RA + ++ + Sbjct: 153 VITPKAREILDKINNVLASAPNYIKVEGHTDNLPINTNRFPSNWELSVLRATNVVHIMQE 212 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + +++S +G+ +R A+D + NRR+D+++ + Sbjct: 213 I-IPAEQLSA-TGYGEYRPLAANDTEAGRARNRRVDLVILRSK 253 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 25/230 (10%), Positives = 59/230 (25%), Gaps = 5/230 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K + +N W + Y+D +T+LM FF+VM+ ++ D + ++I + + L Sbjct: 3 RKRIEEPEKDNSERWLLTYSDLITLLMIFFVVMYSMSKVDAEKFQSIAESLS---VALGG 59 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 ++ + E + T + +E L Sbjct: 60 GTRVEIGASPSGPSLIETYPTNKPQEGKEPEDGEGNGDGTGADMENMTIETIKQKLDKFA 119 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDL--EKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + L E+ + D +S + + + + Sbjct: 120 ADNGIETKLVSSIEERGLVISIQDTLLFESGAAVITPKAREILDKINNVLASAPNYIKVE 179 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + + + I + P Sbjct: 180 GHTDNLPINTNRFPSNWELSVLRATNVVHIMQEIIPAEQLSATGYGEYRP 229 >gi|288573018|ref|ZP_06391375.1| OmpA/MotB domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568759|gb|EFC90316.1| OmpA/MotB domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 240 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 8/175 (4%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 + LP A + +++ Q + S L + + V + G+ +S+ D Sbjct: 66 QEDPLPYGGSSGYDAGEERRQTQSTFQVDRELRSFLKDQEMEQDVSVIVDQRGVTVSLSD 125 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSL 289 Q +F PE +L K+GE L +++ GHTD P RDNW LS Sbjct: 126 QL---LFPLGGVDIRPEGKRLLAKLGEFLKGRIPALAVEGHTDDRPLRGGPYRDNWGLSA 182 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA L+ + G+S I + G+ R + +D S NRR+D+++ + Sbjct: 183 IRAAIVASYLVDAAGISPS-IVQAVGYGPFRPVVPNDSDENRSRNRRVDLVILSK 236 Score = 45.0 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 59/166 (35%), Gaps = 5/166 (3%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 +++KK ++ W Y D MT+L+ FF++++ ++ D + K + F Sbjct: 1 MVRKKRRKEEK--GGAGWLATYGDMMTLLLTFFVLLFAFSSIDVEKFKKMMVSFQGALGV 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 L +++P + D + T+++ + + K + ++ + Sbjct: 59 LDGGKS---LQEDPLPYGGSSGYDAGEERRQTQSTFQVDRELRSFLKDQEMEQDVSVIVD 115 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + L + L + + +P L+ E Sbjct: 116 QRGVTVSLSDQLLFPLGGVDIRPEGKRLLAKLGEFLKGRIPALAVE 161 >gi|148359324|ref|YP_001250531.1| flagellar motor protein MotB [Legionella pneumophila str. Corby] gi|296107371|ref|YP_003619071.1| flagellar motor protein [Legionella pneumophila 2300/99 Alcoy] gi|148281097|gb|ABQ55185.1| flagellar motor protein MotB [Legionella pneumophila str. Corby] gi|295649272|gb|ADG25119.1| flagellar motor protein [Legionella pneumophila 2300/99 Alcoy] Length = 267 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 7/185 (3%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 ++ KS +++ S + + +K+ + K L+ +++ Sbjct: 50 SEGMKSAFNQKDQNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQ 109 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280 + I D + +FD S+ PE ++ L K+ E + + + + G+TD P Sbjct: 110 EGWVEI---DIKAGSLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDNVPIETP 166 Query: 281 AR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 NW LS RA + ++L G++ RI ++G+ + NRR++IL Sbjct: 167 QYPSNWELSAARAATVGRILNGFGIANHRIL-VTGYGDQYPITDNYTEAGRSQNRRVNIL 225 Query: 338 VEDRQ 342 + + Sbjct: 226 IAKNR 230 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 2/143 (1%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 K+K + N+ W + YADF+T+L AFF+VM+ I++ + K++ + Sbjct: 4 KQKKTEEHQDNH--RWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQKD 61 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + + D N ++ + K Q I + S Sbjct: 62 QNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGS 121 Query: 138 QQSEHCKNSLTRDSEKGKDLCKS 160 + K L + Sbjct: 122 LFDSGSADIKPEALIKLMKLAEK 144 >gi|311031291|ref|ZP_07709381.1| flagellar motor protein MotS [Bacillus sp. m3-13] Length = 254 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 73/191 (38%), Gaps = 8/191 (4%) Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + + + ++ L + + + L +++ V Sbjct: 62 NPSAVPFEHPTDFSINTESTNNQEDVAENEEQTQENEDSLQELLVEVQTFLAENDLEDVV 121 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275 + T GI++ + ++ +++ + + LP L K+G +L ++ + GHTD Sbjct: 122 VANRTERGIVLVLEEK---VLYETAEARILPIAHPFLDKVGTLLTKIPNLVKVEGHTDNR 178 Query: 276 PFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN--SAN 331 P NW LS RA S + L+ + +R + G+ R + + N Sbjct: 179 PISTEKFPSNWELSAARASSVIRYLVDAHDLDPERFIAV-GYGDTRPIVENTSNANYQKN 237 Query: 332 RRIDILVEDRQ 342 RR++I++ D Q Sbjct: 238 RRVEIVISDPQ 248 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 49/134 (36%), Gaps = 10/134 (7%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K++ + W + ++D +++ FF++++ ++ D KA+ + F Sbjct: 1 MKRRKKKMSVESGAPKWMVTFSDLFMLVLVFFILLFSMSQIDLVKFKAVAESFKQVNILD 60 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 NP ++ D SI+ T N D+ ++ L+ + + Sbjct: 61 Y----------NPSAVPFEHPTDFSINTESTNNQEDVAENEEQTQENEDSLQELLVEVQT 110 Query: 137 SQQSEHCKNSLTRD 150 ++ + + Sbjct: 111 FLAENDLEDVVVAN 124 >gi|327404103|ref|YP_004344941.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327319611|gb|AEA44103.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 293 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 94/230 (40%), Gaps = 9/230 (3%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 +T ++ + + ++ + L+ + + + ++ L Sbjct: 55 TTLADQKSANEQLTAVNKQLTDDKKNLQIKLSGQENLTESQLAQLSQKDKDLQNKDQDLQ 114 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + R +L KK++ TL + + E + +S+ D+ + Sbjct: 115 EKERMLREMQAIIARQDELTKKLNQTLRDALVGFNSDELTMEIRDGKVYVSMSDKL---L 171 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNI-ARDNWRLSLDRAYS 294 F S+ P+ + L+ + +VL + ++ + GHTD P + +DNW LS+ RA S Sbjct: 172 FKSGSTGVEPKGVEALKVLADVLNKNPDIQILVEGHTDNVPIKTAVFKDNWDLSVARATS 231 Query: 295 AYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 ++L K V+ R++ SG + K ++D + NRR +I++ + Sbjct: 232 ITRMLNEKYAVAATRMTA-SGRGEYFPKASNDTTEGKAKNRRTEIILSPK 280 >gi|327481242|gb|AEA84552.1| flagellar motor protein MotD [Pseudomonas stutzeri DSM 4166] Length = 278 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 7/178 (3%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 ++ + L L + S + I Sbjct: 70 EERPRTTEPDVSQVEDLTGPGSGEPTLDPLERIAQSMRETFGELIANDQLTIRGNELWIE 129 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DN 284 I + ++ +F ++P + ++ K+ +LA + + G TD P N Sbjct: 130 IEL---SSSLLFPSGDALPNNQAFQLIDKVAGILAPFDNPVHVEGFTDNLPISTDKFPTN 186 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 W LS RA S ++L GV+ R++ + G+ + + + NRR+ ++V Sbjct: 187 WELSAARAGSVVRMLAAQGVNPSRLAAV-GYGEFQPVADNATAEGRARNRRVVLVVSR 243 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 40/116 (34%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K + + + Sbjct: 3 RRRAPEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSDSLVGVFNQVDRS 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 K I + P + + + L + + I Sbjct: 63 VKPIPIGEERPRTTEPDVSQVEDLTGPGSGEPTLDPLERIAQSMRETFGELIANDQ 118 >gi|134280878|ref|ZP_01767588.1| chemotaxis LafU protein [Burkholderia pseudomallei 305] gi|254182925|ref|ZP_04889518.1| lateral flagellar motor protein B [Burkholderia pseudomallei 1655] gi|254299720|ref|ZP_04967169.1| lateral flagellar motor protein B [Burkholderia pseudomallei 406e] gi|125657184|gb|ABN48672.1| chemotaxis LafU protein [Burkholderia pseudomallei] gi|134247900|gb|EBA47984.1| chemotaxis LafU protein [Burkholderia pseudomallei 305] gi|157809631|gb|EDO86801.1| lateral flagellar motor protein B [Burkholderia pseudomallei 406e] gi|184213459|gb|EDU10502.1| lateral flagellar motor protein B [Burkholderia pseudomallei 1655] Length = 311 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 78/217 (35%), Gaps = 2/217 (0%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 N Q + D G +S + + + Sbjct: 50 MNVTPEKERKQVAAEIAGRPFFDGGVGIFEQRSRKPVVAPFDAQQPDRMRRRTSGAARER 109 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 LQ + + + V G+ I+I D MF++ S P Sbjct: 110 TIDSLQQRRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPP 169 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVS 305 I +L + VL T + I GHTDA+ + ++ +NW LS RA A QVL G+ Sbjct: 170 FIRLLTALVPVLGTVTNKMVIVGHTDATQYADASVFSNNWNLSSRRALRARQVLADGGMD 229 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 R+ +ISG + +P + NRR+++L+ + Sbjct: 230 AQRMFQISGMGDSVPAVPDNPNHDMNRRVELLLLTSR 266 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 64/173 (36%), Gaps = 5/173 (2%) Query: 5 GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 + II++ ++ G+WK+ +ADF LMA F+V+W++N T + +K Sbjct: 2 STNKESGHGPTIIRRAHKR-HEEHSGGAWKVAFADFTLALMALFMVLWVMNVTPEKERKQ 60 Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + G+ GIF++++ + D + + + + T Q Sbjct: 61 VAAEI--AGRPFFDGGVGIFEQRSRKPVVA--PFDAQQPDRMRRRTSGAARERTIDSLQQ 116 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 +R S+ + + + + +D + + + PP Sbjct: 117 RRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPP 169 >gi|255305283|ref|ZP_05349455.1| chemotaxis protein [Clostridium difficile ATCC 43255] Length = 231 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 9/149 (6%) Query: 196 AKKISSTLSGLVAD-NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + L V + N+ V + GIL+ + D +FD S ++ L K Sbjct: 85 KSNLKQDLKDKVNNSNLQNSVTVKDDSRGILLELDDS---ILFDSGISELKADSKATLNK 141 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKI 312 + +++ I I GHTD P ++ NW LS RA S + + + G+ ++ Sbjct: 142 VYDMIKMIKNKIVIEGHTDNVPVKSSTHESNWDLSSSRAVSVVRYFVEEKGMDP-KLFSA 200 Query: 313 SGFAHHRLKIASDPM--NSANRRIDILVE 339 +G ++ ++++ + NRR++IL+ Sbjct: 201 TGCGEYQPLVSNETAKGRAENRRVNILIT 229 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 28/72 (38%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K N +W YAD +T+++ FF++++ + D + K I Sbjct: 3 RKKNKKKDEINPDAWLATYADTITLILTFFVLLYATSVVDMEKFKNIANALKGQFSGTSM 62 Query: 79 ASKGIFDEQNPP 90 S G + P Sbjct: 63 FSTGSSTSEKSP 74 >gi|310817527|ref|YP_003949885.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309390599|gb|ADO68058.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1] Length = 1779 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 81/280 (28%), Gaps = 12/280 (4%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F TA E P D DE D + Sbjct: 1506 FRILAGVNWTAKPRAKPEPAPVCPLGPEDKDGFEDED---GCADPDNDQDGFPDVSDQCP 1562 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 N ++ + + C + + + D E+ + Sbjct: 1563 NVPETVNGFEDGDGCPDEVPAPVDSDGDGLTDDKDRCPNQPEDKDGFEDEDGCPDPDNDQ 1622 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 L K + ++ + I F + I L + Sbjct: 1623 DGILDGSDKCPNEPEVINGREDEDGCPDQGEVNVRVEGKKILILQKVYFATNKDIILDRS 1682 Query: 249 IVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 +L+++ VL + + I + GHTD+ N LS RA S L++ G++ Sbjct: 1683 FSLLKQVAAVLRANPQLTKIRVEGHTDSQ---GSDAFNLDLSDRRAKSVRTYLIEKEGIA 1739 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 DR+ + G+ + +D + NRR++ ++ G Sbjct: 1740 ADRLEAV-GYGETKPVDTNDTVAGRENNRRVEFIIVGAPG 1778 >gi|253702421|ref|YP_003023610.1| OmpA/MotB domain protein [Geobacter sp. M21] gi|251777271|gb|ACT19852.1| OmpA/MotB domain protein [Geobacter sp. M21] Length = 253 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 8/154 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 +D ++ + L+ V T+ G+++S+ + FD S+ ++ +L Sbjct: 98 KDFRATKAAIEAYLLKVGAQAKVSVSVTQRGLVVSLKEA---GFFDSGSATLKQDSYALL 154 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 + + L+ + + + GHTD P + NW LS RA + Q L K +IS Sbjct: 155 KDVVSSLSSYSNGLRVEGHTDNMPISSASFPSNWELSTARATNVLQYLTKQSDFDPYKIS 214 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 G+ +R + NRR+DI++ Q Sbjct: 215 AA-GYGEYRPVADNSEAEGRGKNRRVDIVLLSEQ 247 >gi|298372336|ref|ZP_06982326.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275240|gb|EFI16791.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058] Length = 705 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 80/278 (28%), Gaps = 18/278 (6%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 + Y + + + P + D T V + + Sbjct: 433 GVADYMD--KCPDTPKGVEVDADGCPIDSDGDGVPDYLDKCPNTPRGVSVDVDGCPIDSD 490 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + ++ ++ + G + D + KE + K Sbjct: 491 GDGVTDDKDKCPDTPNGISVDENGCPQDSDGDGVPDYKDKCPNTPKEVRGLVDENGCPKD 550 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 +D I + K VL + I FD S Sbjct: 551 TDGDGIPDYKDECPTIKGVKENKGCPAVKKDVLKVFKQALHGIQ---------FDTGKST 601 Query: 244 PLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + VL + +++ ++ + + GHTD+ N LS RA + Q L+ Sbjct: 602 IKSVSYGVLNMVVDIMKNNPDYNLVIAGHTDSQ---GNDDFNMTLSDKRAAAVRQYLIDK 658 Query: 303 GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 GV + R+ I G+ + + + NRR++ V Sbjct: 659 GVEDARLQSI-GYGETKPVATNKTAKGRAQNRRVEFTV 695 >gi|295706900|ref|YP_003599975.1| putative flagellar motor channel protein [Bacillus megaterium DSM 319] gi|294804559|gb|ADF41625.1| putative flagellar motor channel protein [Bacillus megaterium DSM 319] Length = 203 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 70/163 (42%), Gaps = 8/163 (4%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 ++++ ++ Q L ++ L + + + + G+++ + +Q +F+ + Sbjct: 43 ASVEKSQQSQKLDNILAKVQGYLKENKLQHVITAKRDERGVVLILQEQ---VLFETGQAD 99 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS 302 L + L ++G + + I + GHTD P NW LS RA + L Sbjct: 100 ILKKGTPFLDELGRLFSTIPNDIKVEGHTDNRPIHTYRYPSNWELSAARASGVIRYLTNH 159 Query: 303 -GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 +S +R + G+ + + + + NRR++I++ D + Sbjct: 160 FSLSANRFEAL-GYGDTKPLVPNTSNDNLQKNRRVEIIISDPE 201 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 22/37 (59%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +AD +T+++ FF++++ +++ D+ + + Sbjct: 1 MVTFADLVTLILVFFILLFSMSSVDNQKFQTVVNSLT 37 >gi|284989545|ref|YP_003408099.1| OmpA/MotB domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284062790|gb|ADB73728.1| OmpA/MotB domain protein [Geodermatophilus obscurus DSM 43160] Length = 313 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 108/314 (34%), Gaps = 62/314 (19%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 W + YAD MT+L+ F+V++ ++ D A+ + Sbjct: 25 RWLVSYADMMTLLLVLFVVLYAMSQVDQQKFAALAKGLAASFG----------------- 67 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 V ++ G T + L + S + + + + Sbjct: 68 -----------------GPVTVQPGPTPEGSVLDGLPGAVDIASAIVPDQTVEQAEVDAA 110 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 L ++ + A + + +DL++ + L A Sbjct: 111 AAQAALAEARQV---------------------AAEARAEYEDLSEVREQIEAALAAAGH 149 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 FE G+++ I+ + +FD ++ PE +L I L + + GH Sbjct: 150 AGAARFEIDERGLVVHIVADQ--VLFDAEQAVLRPEGRQILDAIAPTLRGLPNSLGVEGH 207 Query: 272 TDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN 328 + P I NW LS RA + + L GV R+ +G++ R + +DP + Sbjct: 208 ANHLPVTPGGIWPSNWELSAYRATTVVRYLTTGGVPGARMVA-NGYSDTRPLVPPTDPNS 266 Query: 329 -SANRRIDILVEDR 341 S NRR+D++V Sbjct: 267 ISVNRRVDVVVLSD 280 >gi|116624960|ref|YP_827116.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116228122|gb|ABJ86831.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 276 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 2/153 (1%) Query: 189 KKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 K+ + L +KI L ++ V T G+ I +++ F+ +P Sbjct: 96 KEDMSKLREKIEQALKTVPNFRDLKDHVEMTITSDGLRIELLETEAGMFFESGRPLPTST 155 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+++ E L + I GHTD+ PF NW LS DRA +A +++ + V Sbjct: 156 GSELLKRLAEELGKMPNHLLIEGHTDSKPFSGDGTYTNWELSSDRANAARRLMESNAVRH 215 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 ++++++ GF +L+ DP +++NRR+ ++V+ Sbjct: 216 EQVAQVRGFGDRQLRHPEDPEHASNRRVSVIVQ 248 Score = 88.5 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 4/145 (2%) Query: 15 IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 I + KK + ++ G+WK+ YADF+T +MA F+V+W+++A D+ K+AI +FN Sbjct: 18 IFVIKKKKVMHGGHHGGAWKVAYADFVTAMMALFIVLWLMSA-DEKVKEAISAFFNNP-- 74 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 ++ D K D+S + ++ + K + + Sbjct: 75 -TGPGTQIGTDSAGTGNAIEVPKEDMSKLREKIEQALKTVPNFRDLKDHVEMTITSDGLR 133 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCK 159 ++E + + Sbjct: 134 IELLETEAGMFFESGRPLPTSTGSE 158 >gi|262194964|ref|YP_003266173.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262078311|gb|ACY14280.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 623 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 83/276 (30%), Gaps = 25/276 (9%) Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 P E + S N D + + ++ + + Sbjct: 347 PSEAEDIDGFADSDGCPDLDNDGDGIPDLEDGAPNEPEDRDGFEDGDGVPDRDNDGDGIN 406 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 D + ++ + + + + ++ +D+ Sbjct: 407 DDQDACPLKAETQNGFQDDDGCPDVADSDGDGLADDVDACPEQAEDMDSFQDEDGCPEEN 466 Query: 209 DNIVKGVLFETTRTG------------------ILISIIDQRNTPMFDKSSSIPLPETIV 250 D VL + I+ F + + LP + Sbjct: 467 DRDGDTVLDRQDTCPDEPGKPEFEGCPTKPGAALRDGSIEIIEKVYFPNNQARILPRSFP 526 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 VL+++ VL + ++ + + GHTD N +LS RA S L++ G++ +R+ Sbjct: 527 VLKEVARVLNNHPDIELRVEGHTDDR---GNDTYNRKLSQRRADSVVAFLVEQGIAAERL 583 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 S GF R + NRR++ ++ + G Sbjct: 584 SA-KGFGEERPIADNASAQGRDQNRRVEFVITNGDG 618 >gi|332879143|ref|ZP_08446844.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682943|gb|EGJ55839.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 454 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 80/267 (29%), Gaps = 16/267 (5%) Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 GI + +R + D +L E++ + ++ Sbjct: 188 GITIKFGKQDRDNDGVADKDDKCPDVAGKPELNGCPDADGDGITDAEDSCPDVFGLKEFN 247 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-------- 193 C ++ D C + + + ++ + ++ + Sbjct: 248 GCPDTDGDGIADKDDECPEVAGKPELKGCPDADNDGIADKDDKCPQQAGPKENNGCPWPD 307 Query: 194 -DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + T +FD S PE+ VL Sbjct: 308 RDGDGVLDKDDECPEEAGPASNKGCPEVTQEVQTQLNSFAKTILFDVGKSTIRPESATVL 367 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 I VL S+ G+TD N RLS DRAYS L+ G++ R+S Sbjct: 368 NNIVNVLNKYKNSKFSVEGYTDT---SGNKDKNQRLSEDRAYSVKAYLVDKGINPARLSA 424 Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDI 336 GF + ++ NRR++I Sbjct: 425 -KGFGPEKPIASNKTKKGRELNRRVEI 450 >gi|114565809|ref|YP_752963.1| hypothetical protein Swol_0240 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336744|gb|ABI67592.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 281 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 73/196 (37%), Gaps = 8/196 (4%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E + + +DL + Sbjct: 70 TQGPSMVEGLSGQMLPEGPGTIPDNQGQLDEVKRMIAEFIKAEDLTADEAQKGGSTSTTR 129 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + ++ G++IS D +F S P ++Q+IG L I + G Sbjct: 130 LSDNLIVYEQERGLVISFKDTM---LFASGSDELTPRAREIIQQIGGALLKLPNFIRVEG 186 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMN 328 HTD P NW LS+ RA + VL ++ + +R+ I G+ +R +A+D Sbjct: 187 HTDNRPINTAKFPSNWELSVLRASNVVHVLNENARIPAERL-SIIGYGENRPLVANDSDE 245 Query: 329 SA--NRRIDILVEDRQ 342 NRR+DI++ ++ Sbjct: 246 GRAMNRRVDIVILKKK 261 >gi|319790061|ref|YP_004151694.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1] gi|317114563|gb|ADU97053.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1] Length = 233 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 12/177 (6%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 +P + M+ ++++++ +I L + T I Sbjct: 62 YEQRVINGKNIPVQMPDMYPKMRSRQKIEEKLHEIRQMLKR-----LGINSEVAKFGTSI 116 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-D 283 + I + +F P P+ I ++ +I L ++I G+TD +P Sbjct: 117 RLRINTDK---LFPPGEDRPYPQAIPIIMEICRKLKELDLPLTIEGYTDNTPIHTKRFPS 173 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 NW LS RA + ++ ++ G ++S G + ++ + NRRI+I++ Sbjct: 174 NWELSAARATAILRLFIQCGYDPKKLSAA-GCGPYHPIAPNNTPEGRAKNRRIEIVI 229 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK-KAIEQYFNPFGKNLM 77 +K + +W + D M++L+ FF++++ ++ + +AI+ FG + + Sbjct: 3 RKKKEECKAP--PAWLTSFGDLMSLLLTFFILLYSMSTISLEKFYQAIKGIIEAFGGHYV 60 Query: 78 TASKGIFDEQNPPERSSQ 95 + + + +N P + Sbjct: 61 IYEQRVINGKNIPVQMPD 78 >gi|332799185|ref|YP_004460684.1| OmpA/MotB domain-containing protein [Tepidanaerobacter sp. Re1] gi|332696920|gb|AEE91377.1| OmpA/MotB domain protein [Tepidanaerobacter sp. Re1] Length = 226 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 72/170 (42%), Gaps = 10/170 (5%) Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + +++ + ++ + L +KI + ++ + GV G+++ ++ Sbjct: 56 EAGDAGSFLISAEEQREFELLEEKIQKIID----EDNIGGVQVNLDERGLVVRFVE---G 108 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAY 293 +FD + + +L K+ +L S I I GHTD P NW LS RA Sbjct: 109 VLFDSGKADIRNDAKEILDKLAPLLIESHRQIRIEGHTDNLPIHTSEFPSNWELSTARAV 168 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 + + +++ I +G++ +R +D + NRR+DI++ Sbjct: 169 NVVKYMIERHNLSPYIISAAGYSEYRPIAPNDSEKNRALNRRVDIIILKS 218 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 7/81 (8%), Positives = 22/81 (27%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 Y D +T ++ FF++++ +++ D + + + Sbjct: 1 MTTYGDLITQVLIFFVLLFSLSSVDQKKFDMAMLSLQGSLGIIEGGMTLSEGDFIEAGDA 60 Query: 94 SQNKIDLSIDEHITKNSVDLK 114 I ++ Sbjct: 61 GSFLISAEEQREFELLEEKIQ 81 >gi|167034899|ref|YP_001670130.1| flagellar motor protein MotD [Pseudomonas putida GB-1] gi|166861387|gb|ABY99794.1| OmpA/MotB domain protein [Pseudomonas putida GB-1] Length = 285 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 72/182 (39%), Gaps = 10/182 (5%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + S+ E E LA L+ ++ + L+ N + Sbjct: 71 EQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGDLINSN---QMTVRGNE 127 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281 I I + ++ +F ++P + ++ K+ +L + + G TD P R Sbjct: 128 LWIEIELN---SSLLFGSGDAMPSDKAFAIIDKVANILKPFANPVHVEGFTDNLPIRTAQ 184 Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 NW LS RA S ++L GV+ R++ + G+ ++ ++D + NRR+ +++ Sbjct: 185 YPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQPVASNDTADGRARNRRVVLVI 243 Query: 339 ED 340 Sbjct: 244 SR 245 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 2/113 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N W + YADF+T+L AFF+VM+ I++ ++ K I Q + Sbjct: 2 RRRRHTEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPER 61 Query: 79 ASKGIF--DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + K I DEQ R ++ + S + ++ T + Sbjct: 62 SMKPIPIGDEQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGD 114 >gi|295399258|ref|ZP_06809240.1| OmpA/MotB domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312110141|ref|YP_003988457.1| OmpA/MotB domain protein [Geobacillus sp. Y4.1MC1] gi|294978724|gb|EFG54320.1| OmpA/MotB domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311215242|gb|ADP73846.1| OmpA/MotB domain protein [Geobacillus sp. Y4.1MC1] Length = 254 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 89/206 (43%), Gaps = 10/206 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q N+ + + E ++ + +K + + K+ L ++ + Sbjct: 47 AQIAQSFNAAFTGGTGVLEFQAPIEPEPLPSQPKQQNDQQNDNKKKIDKQEKEELHEVQE 106 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 KI + + V + + + T G+ I+I++ +FD S+ P+ + ++I + Sbjct: 107 KIDTYI---VNERLNGKLKTSLTEEGLAITILND---ILFDSGSAEVRPQDRQLAKEISQ 160 Query: 258 VL-AHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + I I GHTD P N NW LS+ RA + ++L+++ + R+ G+ Sbjct: 161 MLVMNPPRNIIISGHTDNVPIHNAQFSSNWELSVMRAVNFMKLLLENPKLDPRLFSAKGY 220 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 + ++D NRR++IL+ Sbjct: 221 GEFKPVASNDTPEGRMKNRRVEILIL 246 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 4/113 (3%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + SW I Y+D +T+L+A F+V++ + D I Q FN T Sbjct: 3 KKKKQKHGEHINESWLIPYSDLLTLLLALFIVLFASSQIDQKKFAQIAQSFNAAF----T 58 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 G+ + Q P E ++ N + + + Q + Sbjct: 59 GGTGVLEFQAPIEPEPLPSQPKQQNDQQNDNKKKIDKQEKEELHEVQEKIDTY 111 >gi|312134920|ref|YP_004002258.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311774971|gb|ADQ04458.1| OmpA/MotB domain protein [Caldicellulosiruptor owensensis OL] Length = 257 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 13/164 (7%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 K M ++ + D+ K++ + + L G+ I + D +F+ S Sbjct: 92 KNRQMTEEELINDIQKQVLGLIKEHGIEGKA---LVIQEERGLSILLKD----VLFNTGS 144 Query: 242 SIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQV- 298 + P+ V+ +I ++L I I GHTD P N NW LS RA S Q Sbjct: 145 AKLTPQAKEVVHEIAKILEKVPDNNIRIEGHTDNVPIHNKYFYSNWELSTARATSVLQEI 204 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L S V +R + G+ +R ++ + NRR+ I++ Sbjct: 205 LRVSKVRPERF-SVVGYGEYRPIASNKTPEGRALNRRVTIVILR 247 >gi|15893597|ref|NP_346946.1| chemotaxis motility protein B, gene motB [Clostridium acetobutylicum ATCC 824] gi|15023148|gb|AAK78286.1|AE007545_3 Chemotaxis motility protein B, gene motB [Clostridium acetobutylicum ATCC 824] gi|325507717|gb|ADZ19353.1| Chemotaxis motility protein B, gene motB [Clostridium acetobutylicum EA 2018] Length = 256 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + GK + + D + + + +L+D+ KKI ++ + Sbjct: 56 NGASGKTVIGNQDAVDIKSTSSYVTQEASKQSASAEKAEENKLKDVKKKIDQYVNQ---N 112 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 + V G+++SI+D MFD + P+ L +IGE+L I I Sbjct: 113 GMQGSVSTNLQEKGLVVSIVDTL---MFDTGRAEVKPDFQKKLVEIGEILKTIDNYIRIE 169 Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM 327 GHTD +P N N L R+ + + + S + ++ +S +A R ++ Sbjct: 170 GHTDNTPISNSQYASNIELGSARSNNVEHLFIDVSKIPVTQMYTVS-YADTRPVADNNSE 228 Query: 328 N--SANRRIDILVEDRQ 342 + NRR+DI++ + + Sbjct: 229 AGKARNRRVDIVILNSK 245 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 5/130 (3%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + P N W + Y+D +T+LMAFF+VM+ + + I Q + Sbjct: 2 KRKKHEEPENSERWLLTYSDLITLLMAFFIVMYASSTVSKEKFAQIAQSLK--VGFNGAS 59 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 K + Q + + + +K S + N+ K ++ + + Q Sbjct: 60 GKTVIGNQ---DAVDIKSTSSYVTQEASKQSASAEKAEENKLKDVKKKIDQYVNQNGMQG 116 Query: 140 SEHCKNSLTR 149 S Sbjct: 117 SVSTNLQEKG 126 >gi|118581870|ref|YP_903120.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM 2379] gi|118504580|gb|ABL01063.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379] Length = 271 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 8/203 (3%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 ++ S+ + + + + + P S+ +K + +D + SS + Sbjct: 58 MVQAGAPSPKMNILPSSQMSITPSIKPEVSVMPGSRGARGMVKTRATEKDFRQIKSSIEA 117 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 LV V TR G+++S+ + FD + P ++ I EV+ + Sbjct: 118 YLVKQGAQSKVNLTITRRGLIVSLKEA---GFFDSGQAQIKPTAYELINTIAEVMTQYSN 174 Query: 265 VISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 + + GHTD P NW LS RA + + L+++ GV D+I ++G+A R Sbjct: 175 PLRLEGHTDNVPINTSQFPSNWELSTARAVNGLKYLIRNFGVDPDKI-SVAGYAEFRPMA 233 Query: 323 ASDP--MNSANRRIDILVEDRQG 343 + + NRR+D+++ +G Sbjct: 234 DNATPEGRAKNRRVDLVMLSNEG 256 >gi|115379068|ref|ZP_01466194.1| hypothetical protein STIAU_2752 [Stigmatella aurantiaca DW4/3-1] gi|115363928|gb|EAU63037.1| hypothetical protein STIAU_2752 [Stigmatella aurantiaca DW4/3-1] Length = 831 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 81/280 (28%), Gaps = 12/280 (4%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F TA E P D DE D + Sbjct: 558 FRILAGVNWTAKPRAKPEPAPVCPLGPEDKDGFEDED---GCADPDNDQDGFPDVSDQCP 614 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 N ++ + + C + + + D E+ + Sbjct: 615 NVPETVNGFEDGDGCPDEVPAPVDSDGDGLTDDKDRCPNQPEDKDGFEDEDGCPDPDNDQ 674 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 L K + ++ + I F + I L + Sbjct: 675 DGILDGSDKCPNEPEVINGREDEDGCPDQGEVNVRVEGKKILILQKVYFATNKDIILDRS 734 Query: 249 IVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 +L+++ VL + + I + GHTD+ N LS RA S L++ G++ Sbjct: 735 FSLLKQVAAVLRANPQLTKIRVEGHTDSQ---GSDAFNLDLSDRRAKSVRTYLIEKEGIA 791 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 DR+ + G+ + +D + NRR++ ++ G Sbjct: 792 ADRLEAV-GYGETKPVDTNDTVAGRENNRRVEFIIVGAPG 830 >gi|261403961|ref|YP_003240202.1| OmpA/MotB domain-containing protein [Paenibacillus sp. Y412MC10] gi|329930219|ref|ZP_08283832.1| chemotaxis protein MotB [Paenibacillus sp. HGF5] gi|261280424|gb|ACX62395.1| OmpA/MotB domain protein [Paenibacillus sp. Y412MC10] gi|328935241|gb|EGG31722.1| chemotaxis protein MotB [Paenibacillus sp. HGF5] Length = 268 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 84/218 (38%), Gaps = 9/218 (4%) Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + S+ T + K T + +K +P + ++ A Sbjct: 43 DARKFQEMSEAFSVALTGGTGVLDYSKTEPSDTPPNINDHKATTPSVPATTPDQRRAELM 102 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ +DL K + + + + + + + ++I+I D +F ++ PE Sbjct: 103 RQEQEDLEKLKKQLDNYIKNNGLTSELSTKLNHSQLVITIRDN---ALFPSGEAVVKPEA 159 Query: 249 IVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRAYS-AYQVLMKSGVS 305 + + I ++L + I + GHTD P N NW LS DRA +L S + Sbjct: 160 RKLAKAISQMLHKFPDYEIIVSGHTDNVPISNSKYPSNWDLSSDRALQFMKILLTNSELD 219 Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 R I G+ + ++ + NRR+++ + + Sbjct: 220 PKRFMPI-GYGEYHPIADNNTAVGRAKNRRVEVSIIRK 256 >gi|119476294|ref|ZP_01616645.1| flagellar motor protein [marine gamma proteobacterium HTCC2143] gi|119450158|gb|EAW31393.1| flagellar motor protein [marine gamma proteobacterium HTCC2143] Length = 344 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 86/225 (38%), Gaps = 10/225 (4%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 S + +Y+ L + + Q + +L + + + Sbjct: 38 SQVNEGKYKVLSQTLSEVFARQGPGVPERTLDPFQIGDVVKSNPQSFIELEAENDGDNSG 97 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + E+ + + +KI L GL+ N V + + + + +++ + Sbjct: 98 SSANEQSERGALPAEFEQINQKIDEALGGLLKSN---QVTVRGSEKWLEVEL---KSSLL 151 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295 F S + VL+ I +L T I + G TD P + NW LS RA + Sbjct: 152 FGSGDSTLSVPAVGVLESIASILKDQTNPIRVEGFTDNQPINSVRYPSNWELSAGRASAV 211 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + ++ G+S DR++ I G+ H+ +D + NRR+ +++ Sbjct: 212 VKFFIEEGLSADRLAAI-GYGEHQPVTDNDSEEGRAENRRVVLMI 255 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 42/124 (33%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + I + + W + YADF+T+L AFF+VM+ I+ ++ K + Q + Sbjct: 3 RRRIVEDSVSHDRWLVSYADFITLLFAFFVVMYSISQVNEGKYKVLSQTLSEVFARQGPG 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + ++ I+ + + + Q ++ + Sbjct: 63 VPERTLDPFQIGDVVKSNPQSFIELEAENDGDNSGSSANEQSERGALPAEFEQINQKIDE 122 Query: 140 SEHC 143 + Sbjct: 123 ALGG 126 >gi|86135195|ref|ZP_01053777.1| OmpA family protein [Polaribacter sp. MED152] gi|85822058|gb|EAQ43205.1| OmpA family protein [Polaribacter sp. MED152] Length = 452 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 80/271 (29%), Gaps = 23/271 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 + G+ + P+ D T + ++ Sbjct: 201 KNDACPEVAGLAEFNGCPDADGDGIKDSDDACPNTPGLASMNGCPDADGDGVADKDDMCP 260 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + ++ ++ C ++ D C + + L Sbjct: 261 DVKGTKANKGCPDTDGDGVVDKDDKCPTVAGPAANAGCPWPDTDGDGV-----------L 309 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 K I+ A N T +I+ + +F+ + L Sbjct: 310 DKDDKCINEV---GPASNNGCPEEVITKEATEVINFTAKS--ILFNSGRATFKAGVTKQL 364 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 I +V+A + SI GHTD+ + N RLS RA + L+K+GV R+ Sbjct: 365 DAIVDVMAKYPKATFSIGGHTDS---SGSSSLNLRLSEKRAIAVRDYLVKNGVETTRLEA 421 Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVED 340 I G+ + NRR++I V + Sbjct: 422 I-GYGEGFPIDTNKTRAGRANNRRVEIKVTN 451 >gi|310823400|ref|YP_003955758.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309396472|gb|ADO73931.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1] Length = 611 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 75/255 (29%), Gaps = 10/255 (3%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 ++ +L D ++VD + YQ + + ++ ++ Sbjct: 329 DKSAFELDSDGDGVPDTVDKCPTEKEDRDGYQDDDGCLDPDNDGDGISDGEDRCPNKPGT 388 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR--KKRLQDLAKKISSTLSGLVADNI 211 + DL+ + + K ++ + Sbjct: 389 VEHRGCPEDLDTDGDGIPDVLDACPDKPGPKEYDGCPDSDGDEVPDNVDDCPDLSGPPEN 448 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIR 269 + I + +F+ + ++ +L ++ VL + + I Sbjct: 449 NGCPYDSPPFVLVESDRIRIKGNILFETGQAKIQKQSFKLLDEVASVLRRNPTLGPVLIE 508 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327 GHTD N LS RA + L G+ R+S GF + +D Sbjct: 509 GHTDNV---GSRNYNVDLSQRRAKAVLDYLAGKGIDRKRLSS-KGFGFDQPIATNDTPLG 564 Query: 328 NSANRRIDILVEDRQ 342 + NRR++ + + Sbjct: 565 RAKNRRVEFRLIKSE 579 >gi|326562151|gb|EGE12479.1| OmpA/MotB domain protein [Moraxella catarrhalis 7169] gi|326565667|gb|EGE15830.1| OmpA/MotB domain protein [Moraxella catarrhalis 12P80B1] gi|326566236|gb|EGE16388.1| OmpA/MotB domain protein [Moraxella catarrhalis 103P14B1] gi|326567112|gb|EGE17234.1| OmpA/MotB domain protein [Moraxella catarrhalis BC1] gi|326576199|gb|EGE26114.1| OmpA/MotB domain protein [Moraxella catarrhalis CO72] Length = 224 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 8/184 (4%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + ++ K A+ + + GV Sbjct: 45 VAGALGGTAISKATGGEKTGRDAILGAAVGAAAGAYMERQAKQIEQQMQGTGVTVTHDTD 104 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIA 281 I++ F + L ++ + E + GHTD++ A Sbjct: 105 TGNINLT-MPGNITFAHDDDTLNSAFLGRLNQLANTMNQYHETTIVIVGHTDST---GQA 160 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 N LS RA S L+ GV RI + G+ + ++ + NRR+++++ Sbjct: 161 AYNQELSERRADSVRYYLINQGVDPYRIQTV-GYGMRQPIASNATEAGRAQNRRVELMIL 219 Query: 340 DRQG 343 QG Sbjct: 220 APQG 223 >gi|315617885|gb|EFU98483.1| chemotaxis protein motB [Escherichia coli 3431] Length = 265 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 3/202 (1%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 ++T + + + E++ + RL+ L + + Sbjct: 24 ATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRGDLDQLI 83 Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + + + + G+ I IID +N PMF S+ P +L+ I VL Sbjct: 84 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 143 Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 IS+ GHTD P+ + NW LS DRA ++ + LM G+ ++ ++ G A Sbjct: 144 PNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMR 203 Query: 321 KIASDPMNSANRRIDILVEDRQ 342 P ++ NRRI +LV ++Q Sbjct: 204 LSDRGPDDAVNRRISLLVLNKQ 225 >gi|33592172|ref|NP_879816.1| flagellar motor protein MotB [Bordetella pertussis Tohama I] gi|33596124|ref|NP_883767.1| flagellar motor protein MotB [Bordetella parapertussis 12822] gi|33601523|ref|NP_889083.1| flagellar motor protein MotB [Bordetella bronchiseptica RB50] gi|33571817|emb|CAE41326.1| chemotaxis protein MotB [Bordetella pertussis Tohama I] gi|33573127|emb|CAE36772.1| chemotaxis protein MotB [Bordetella parapertussis] gi|33575959|emb|CAE33038.1| chemotaxis protein MotB [Bordetella bronchiseptica RB50] gi|332381588|gb|AEE66435.1| flagellar motor protein MotB [Bordetella pertussis CS] Length = 315 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 3/201 (1%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 S + ++ + + + + + RL+ L ++ + Sbjct: 72 GGPSSSAETSAIPGGGQDPLRSQGDVRRAEGNRVEAQPMGDAERRDRHRLERLKVRLENL 131 Query: 203 LSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + V N +L + T G+ I I+D +N PMF S+ P +L+++G VL Sbjct: 132 IEESPVLKNFRPQLLIDMTTEGLRIQIVDNQNRPMFATGSADVQPYMRDILRELGPVLND 191 Query: 262 STEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 ISI GHTDAS + A NW LS DRA ++ Q L+ G+ E ++ +I G A Sbjct: 192 LPNKISIAGHTDASQYARGERAYSNWELSADRANASRQELVAGGMHEGKVLRIQGLASSM 251 Query: 320 LKIASDPMNSANRRIDILVED 340 + DP + NRRI ++V + Sbjct: 252 SLVKDDPFAAVNRRISLVVLN 272 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 66/179 (36%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 ++ GSWKI YADF+T +MAFFLVMW+I+ + K I +YF + +T Sbjct: 19 GGHHGGSWKIAYADFITAMMAFFLVMWLISIVPREELKGIAEYFRMPLRVALTGGPSSSA 78 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 E + Q+ + D + + + +++ + + + E Sbjct: 79 ETSAIPGGGQDPLRSQGDVRRAEGNRVEAQPMGDAERRDRHRLERLKVRLENLIEESPVL 138 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 R + ++ N+ F + + + L + + + +S Sbjct: 139 KNFRPQLLIDMTTEGLRIQIVDNQNRPMFATGSADVQPYMRDILRELGPVLNDLPNKIS 197 >gi|74317269|ref|YP_315009.1| flagellar motor protein MotD [Thiobacillus denitrificans ATCC 25259] gi|74056764|gb|AAZ97204.1| outer membrane chemotaxis MotB protein [Thiobacillus denitrificans ATCC 25259] Length = 263 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 10/193 (5%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + + + S + A++ + + ++A + + LV + Sbjct: 63 GGAFGKPVAELPVPQLPGTTLPPEVRQRSLRQQQAIEEQAHMTEVASNLLDVMGPLVKEG 122 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 V +R G+ I I +F+ + PE++ VL+ + L H I I G Sbjct: 123 ---KVRVTQSRRGVSIEINAN---VLFEPGRAELAPESLAVLRAVAAQLRHEPFNIEITG 176 Query: 271 HTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 HTD P N NW LS RA S ++L G++ R+ I G + ++ Sbjct: 177 HTDIVPISNSVFASNWELSAVRATSVVRLLADGGIAPSRLFAI-GREASQPIASNGTAEG 235 Query: 328 NSANRRIDILVED 340 + NRR+++++ Sbjct: 236 RARNRRVELMILS 248 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 50/159 (31%), Gaps = 6/159 (3%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83 D N W + YADF+T+L AFF+VM+ ++A ++ + + K + Sbjct: 17 DSDHENHDRWLVSYADFITLLFAFFVVMYAVSAVNEGKYRVLANALGGAF------GKPV 70 Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 + P + ++ + +++ + T + + + ++ Sbjct: 71 AELPVPQLPGTTLPPEVRQRSLRQQQAIEEQAHMTEVASNLLDVMGPLVKEGKVRVTQSR 130 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + + +L L E Sbjct: 131 RGVSIEINANVLFEPGRAELAPESLAVLRAVAAQLRHEP 169 >gi|219670208|ref|YP_002460643.1| OmpA/MotB domain protein [Desulfitobacterium hafniense DCB-2] gi|219540468|gb|ACL22207.1| OmpA/MotB domain protein [Desulfitobacterium hafniense DCB-2] Length = 275 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 88/223 (39%), Gaps = 9/223 (4%) Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 Y + + + +S E G + +E + P E Sbjct: 36 YSMSKVDAEKFQSIAESLSVALGGGTRVEIGASPSGPSLIETYPTNKPQEGKAPEDGEGN 95 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE-TTRTGILISIIDQRNTPMFDKSSS 242 + I L ADN ++ L G++ISI D +F+ ++ Sbjct: 96 GDGTGADMENMTIETIKQKLDKFAADNGIETKLVSSIEERGLVISIQDTL---LFESGAA 152 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMK 301 + P+ +L KI VLA + I + GHTD P N NW LS+ RA + ++ + Sbjct: 153 VITPKAREILDKINNVLASAPNYIKVEGHTDNLPINTNRFPSNWELSVLRATNVVHIMQE 212 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + +++S +G+ +R ++D + NRR+D+++ + Sbjct: 213 I-IPAEQLSA-TGYGEYRPLTSNDTEAGRARNRRVDLVILRSK 253 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/230 (10%), Positives = 59/230 (25%), Gaps = 5/230 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K + +N W + Y+D +T+LM FF+VM+ ++ D + ++I + + L Sbjct: 3 RKRIEEPEKDNSERWLLTYSDLITLLMIFFVVMYSMSKVDAEKFQSIAESLS---VALGG 59 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 ++ + E + T + +E L Sbjct: 60 GTRVEIGASPSGPSLIETYPTNKPQEGKAPEDGEGNGDGTGADMENMTIETIKQKLDKFA 119 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDL--EKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + L E+ + D +S + + + + Sbjct: 120 ADNGIETKLVSSIEERGLVISIQDTLLFESGAAVITPKAREILDKINNVLASAPNYIKVE 179 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + + + I + P Sbjct: 180 GHTDNLPINTNRFPSNWELSVLRATNVVHIMQEIIPAEQLSATGYGEYRP 229 >gi|304407655|ref|ZP_07389306.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9] gi|304343138|gb|EFM08981.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9] Length = 263 Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 69/175 (39%), Gaps = 9/175 (5%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 PP K + K++ Q+L + + + + + + V G+ I + D Sbjct: 82 PAPVKPPEEKPNAALEEEKRKNQELENVFAIIQAYIKNNKLEEKVFVTNEEQGVSIRLSD 141 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLS 288 Q +FD + +L K+ + ISI GHTD P RDNW LS Sbjct: 142 Q---FLFDLGKADLKKAARPILDKLSSLFVKLDHPISIEGHTDNLPIQPGGEFRDNWALS 198 Query: 289 LDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 R+ S + + + + + +I+G+ R + S NRR++I + Sbjct: 199 AGRSLSVLRYFTEIAQLEPTKF-QIAGYGDTRPIAPNTTDANRSRNRRVEITILR 252 >gi|148546771|ref|YP_001266873.1| flagellar motor protein MotD [Pseudomonas putida F1] gi|148510829|gb|ABQ77689.1| OmpA/MotB domain protein [Pseudomonas putida F1] gi|313497822|gb|ADR59188.1| Flagellar motor protein MotD [Pseudomonas putida BIRD-1] Length = 285 Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 73/182 (40%), Gaps = 10/182 (5%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + S+ E E LA L+ ++ + L+ + + Sbjct: 71 EQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGDLINSD---QMTVRGNE 127 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281 + I + ++ +F ++P + +++K+ +L + + G TD P R Sbjct: 128 LWVEIELN---SSLLFGSGDAMPSDKAFAIIEKVANILKPFANPVHVEGFTDNLPIRTAQ 184 Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 NW LS RA S ++L GV+ R++ + G+ ++ ++D + NRR+ +++ Sbjct: 185 YPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQPVASNDTAEGRARNRRVVLVI 243 Query: 339 ED 340 Sbjct: 244 SR 245 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 51/133 (38%), Gaps = 7/133 (5%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N W + YADF+T+L AFF+VM+ I++ ++ K I Q + Sbjct: 2 RRRRHTEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPER 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + K P + + + E + K+S + G + ++ + Sbjct: 62 SMK-------PIPIGDEQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGD 114 Query: 139 QSEHCKNSLTRDS 151 + ++ + Sbjct: 115 LINSDQMTVRGNE 127 >gi|325271956|ref|ZP_08138407.1| flagellar motor protein MotD [Pseudomonas sp. TJI-51] gi|324102904|gb|EGC00300.1| flagellar motor protein MotD [Pseudomonas sp. TJI-51] Length = 285 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 10/194 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 K + + ++ E E LA L+ ++ + L+ Sbjct: 59 PERSMKPIPVGEEKPLTVRPAEPLVNDSEQTEAGLAATNTDPLKTISDDVRDAFGDLIKS 118 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 N + I I + ++ +F ++P + +++K+ ++L + + Sbjct: 119 N---QMTVRGNELWIEIELN---SSLLFGSGDAMPSDKAFAIIEKVADILKPFANPVHVE 172 Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327 G TD P R NW LS RA S ++L GV+ R++ + G+ ++ ++D Sbjct: 173 GFTDNLPIRTAQYPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQPVASNDTAD 231 Query: 328 -NSANRRIDILVED 340 + NRR+ +++ Sbjct: 232 GRARNRRVVLVISR 245 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 51/133 (38%), Gaps = 7/133 (5%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N W + YADF+T+L AFF+VM+ I++ ++ K I Q + Sbjct: 2 RRRRHTEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPER 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + K P + + + E + +S + G + ++ + Sbjct: 62 SMK-------PIPVGEEKPLTVRPAEPLVNDSEQTEAGLAATNTDPLKTISDDVRDAFGD 114 Query: 139 QSEHCKNSLTRDS 151 + + ++ + Sbjct: 115 LIKSNQMTVRGNE 127 >gi|1170998|sp|P46827|YTXE_BACME RecName: Full=Uncharacterized 24.6 kDa protein in ccpA 3'region; AltName: Full=ORF2 gi|415666|gb|AAA22297.1| homologue to motB; ORF2; putative [Bacillus megaterium] Length = 218 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 70/163 (42%), Gaps = 8/163 (4%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 ++++ ++ Q L ++ L + + + + G+++ + +Q +F+ + Sbjct: 58 ASVEKSQQSQKLDNILAKVQGYLKENKLQHVITAKRDERGVVLILQEQ---VLFETGQAD 114 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS 302 L + L ++G + + I + GHTD P NW LS RA + L Sbjct: 115 ILKKGTPFLDELGRLFSTIPNDIKVEGHTDNRPIHTYAYPSNWELSAARASGVIRYLTNH 174 Query: 303 -GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 +S +R + G+ + + + + NRR++I++ D + Sbjct: 175 FSLSANRFEAL-GYGDTKPLVPNTSNDNLQKNRRVEIIISDPE 216 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 +K++ W + +AD +T+++ FF++++ +++ D+ + + Sbjct: 1 MKRRRKRYSAQ--SPKWMVTFADLVTLILVFFILLFSMSSVDNQKFQTVVNSLT 52 >gi|310819615|ref|YP_003951973.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309392687|gb|ADO70146.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1] Length = 593 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 73/257 (28%), Gaps = 23/257 (8%) Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 + +D + ++ + ++ + C ++ Sbjct: 353 DSDGDGILDPDDKCPSVPGVARFQGCPDTDGDGLVDPDDKCPSVPGVERFQGCPDTDGDG 412 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 E D C S + K +L D + Sbjct: 413 IEDASDKCPSVPGIHELKGCPPKDT------------DKDQLPDHRDNCPNEPGPAANQG 460 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISI 268 I I D+ FD + LP + +L ++ ++ E I I Sbjct: 461 CPVQQPQLVEIQRDRIEIKDK---VYFDSDKATILPRSNKLLDQVARIIIEHPELEKIWI 517 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-- 326 GHTD N LS RA L+ GV R+ G+ ++D Sbjct: 518 EGHTDER---GSQDYNRELSQKRAEEVRDYLVTRGVPIGRLVP-KGYGRQYPVASNDTVE 573 Query: 327 MNSANRRIDILVEDRQG 343 +ANRR++ L R+G Sbjct: 574 GRAANRRVEFLTTPREG 590 >gi|146307821|ref|YP_001188286.1| flagellar motor protein MotD [Pseudomonas mendocina ymp] gi|145576022|gb|ABP85554.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 269 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 74/203 (36%), Gaps = 10/203 (4%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 K + +S G ++ EE + LQ +A + Sbjct: 41 NEGKYKILSESLTGVFNQPDRSIKPIPVGEERPRTGEPENTSLDDPSADATLQSIASSVR 100 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L+ + + I I + ++ +F ++P + +++K+ ++LA Sbjct: 101 EAFGELIQSD---QLTVRGNEMWIEIEL---SSSLLFPSGDALPNNQAFDIIEKVAKILA 154 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G TD P + NW LS RA S ++L GV R++ + G+ + Sbjct: 155 PYQNPVKVEGFTDNLPIQTSQFPTNWELSSARAASIVRMLAMDGVDPSRLAAV-GYGEFQ 213 Query: 320 LKIASDPM--NSANRRIDILVED 340 + + NRR+ +++ Sbjct: 214 PIADNATAEGRARNRRVVLVISR 236 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 34/84 (40%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K + + + Sbjct: 3 RRRHHEDHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSESLTGVFNQPDRS 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSID 103 K I + P L Sbjct: 63 IKPIPVGEERPRTGEPENTSLDDP 86 >gi|108758523|ref|YP_629116.1| putative chemotaxis protein MotB [Myxococcus xanthus DK 1622] gi|108462403|gb|ABF87588.1| putative chemotaxis protein MotB [Myxococcus xanthus DK 1622] Length = 267 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 86/252 (34%), Gaps = 8/252 (3%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 SQ K D E + + + Q+ E L + Sbjct: 20 SQGKFDAKALEAENFAKGLNDEKGAREAAEAKVKALEEKIAELEQEREALNTRLGTAESR 79 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 + N + L++ + K+ L+ + + + L + Sbjct: 80 LTAGAAERRALEEKNSQLAALNDELARNTKKLAQAKEELEKRSSEYENLAQSLKQEISDG 139 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHT 272 + + + + + D+ +F S+ E L+KI + L +I + GHT Sbjct: 140 KIELSELKGKMTVQLKDK---ILFASGSARVGKEGEEALKKIADALKTVQGKIIRVEGHT 196 Query: 273 DASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 D P NW LSL RA + + L +GV +G+ ++ A+D + Sbjct: 197 DDVPTGGGQFPSNWELSLARAMAVVRSLQNAGVDPT-FLSAAGYGQYQPIAANDSAENRS 255 Query: 331 -NRRIDILVEDR 341 NRRI+I++ + Sbjct: 256 LNRRIEIVLAPK 267 >gi|152976910|ref|YP_001376427.1| flagellar motor protein MotB [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025662|gb|ABS23432.1| OmpA/MotB domain protein [Bacillus cytotoxicus NVH 391-98] Length = 265 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 9/203 (4%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D E S + E + + EK A +++ + +L S Sbjct: 64 GGTGNKEFLSDQKPKKKEELSTDSLEAENIKKQATEKAEAEVKQREMNELKAVQKSIDQY 123 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTE 264 + + + T G++I+I++ +FD + PE++ + ++ +L+ + Sbjct: 124 IEERQLSSSFKTKLTEQGLMITILEN---VLFDSGKADVKPESLNIANEMSHLLLSAAPR 180 Query: 265 VISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + Q +L + + S +G+ +R Sbjct: 181 EITVSGHTDNVPITNSQFSSNWELSTQRAVNFMQVLLQNKQLDPAKFSA-TGYGEYRPAT 239 Query: 323 ASDPMN--SANRRIDILVEDRQG 343 ++D + NRR+++ + QG Sbjct: 240 SNDTSEGKAKNRRVEVFILPLQG 262 >gi|294501552|ref|YP_003565252.1| putative flagellar motor channel protein [Bacillus megaterium QM B1551] gi|294351489|gb|ADE71818.1| putative flagellar motor channel protein [Bacillus megaterium QM B1551] Length = 203 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 69/163 (42%), Gaps = 8/163 (4%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 ++++ ++ Q L ++ L + + + + G+++ + +Q +F+ + Sbjct: 43 ASVEKSQQSQKLDSILAKVQDYLKENKLQNVITAKRDERGVVLILQEQ---VLFETGQAD 99 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS 302 L + L ++G + + I + GHTD P NW LS RA + L Sbjct: 100 ILKKGTPFLDELGRLFSTIPNDIKVEGHTDNRPIHTYRYPSNWELSAARASGVIRYLTNH 159 Query: 303 -GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 +S +R + G+ + + + NRR++I++ D + Sbjct: 160 FSLSANRFEAL-GYGDTKPLVPNTSNGNLQKNRRVEIIISDPE 201 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 22/37 (59%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +AD +T+++ FF++++ +++ D+ + + Sbjct: 1 MVTFADLVTLILVFFILLFSMSSVDNQKFQTVVNSLT 37 >gi|257097127|pdb|2ZVY|A Chain A, Structure Of The Periplasmic Domain Of Motb From Salmonella (Crystal Form Ii) gi|257097128|pdb|2ZVY|B Chain B, Structure Of The Periplasmic Domain Of Motb From Salmonella (Crystal Form Ii) gi|257097129|pdb|2ZVZ|A Chain A, Structure Of The Periplasmic Domain Of Motb From Salmonella (Crystal Form Iii) gi|257097130|pdb|2ZVZ|B Chain B, Structure Of The Periplasmic Domain Of Motb From Salmonella (Crystal Form Iii) Length = 183 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 3/169 (1%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTP 235 + +++ + RL L + + + + + + G+ I IID +N P Sbjct: 3 QPNIDELKKRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRP 62 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAY 293 MF S+ P +L+ I VL IS+ GHTD P+ N NW LS DRA Sbjct: 63 MFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRAN 122 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ + L+ G+ ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 123 ASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 171 >gi|307824498|ref|ZP_07654723.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] gi|307734482|gb|EFO05334.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] Length = 265 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 80/207 (38%), Gaps = 10/207 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + + + +T + + + +K +K+L ++ Sbjct: 37 GEAFSNKEQQGNEIAPIQIGTLPTTIQPIPLENPTAVEVEERRELSEEILKERKQLSQVS 96 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L+ + DN+ V + I + + + +F + + I VLQKI Sbjct: 97 GQFEQVLAPFIQDNL---VSVKKNDYWIELEMNSEM---LFLSGEAELSKKAIPVLQKIV 150 Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 EV+ +++I GHTD P N R NW LS RA S +K G++ R+S I G+ Sbjct: 151 EVINPLPNMVNIEGHTDNIPIDNIKFRSNWDLSSARATSVVHEFVKEGINPPRLSAI-GY 209 Query: 316 AHHRLKIASDPMNSA--NRRIDILVED 340 + NRR+ +++ Sbjct: 210 GEFHPIGDNKIEAGRFKNRRVVLVLMS 236 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 13/186 (6%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 + YADF+T+L AFF+VM+ I++ ++ K + N ++ Sbjct: 1 MVSYADFITLLFAFFVVMYSISSVNEGKYKTLSDSLGEAF-------------SNKEQQG 47 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 ++ T + L+ + + ++ + L I + Sbjct: 48 NEIAPIQIGTLPTTIQPIPLENPTAVEVEERRELSEEILKERKQLSQVSGQFEQVLAPFI 107 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 +L + I E N + LS E L+ K LQ + + I+ + + + Sbjct: 108 QDNLVSVKKNDYWIELEMNSEMLFLSGEAELSKKAIPVLQKIVEVINPLPNMVNIEGHTD 167 Query: 214 GVLFET 219 + + Sbjct: 168 NIPIDN 173 >gi|323191390|gb|EFZ76652.1| lateral flagellar motor protein B [Escherichia coli RN587/1] Length = 307 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 119/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H+ K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + KI L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G DRA SA +VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------------DRALSARRVLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271 >gi|83717140|ref|YP_438356.1| chemotaxis lafU protein [Burkholderia thailandensis E264] gi|167614802|ref|ZP_02383437.1| Chemotaxis lafU protein [Burkholderia thailandensis Bt4] gi|257141387|ref|ZP_05589649.1| chemotaxis lafU protein [Burkholderia thailandensis E264] gi|83650965|gb|ABC35029.1| Chemotaxis lafU protein [Burkholderia thailandensis E264] Length = 311 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 79/217 (36%), Gaps = 2/217 (0%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 N Q + D G +S + + + Sbjct: 50 MNVTPEKERKQVAAEIAGRPFFDGGVGIFEQRSRKPVVAPFDAQQPERVKRRTPGAARER 109 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 LQ + + + V G+ I+I D MF++ S P+ Sbjct: 110 TIDSLQQRRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPQ 169 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVS 305 + +L + VL T + I GHTDA+ + ++ +NW LS RA A Q+L G+ Sbjct: 170 FVRLLTALVPVLGTVTNKMVIVGHTDATQYADTSVFSNNWNLSSRRALRARQILADGGMD 229 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 R+ +ISG + +P + NRR+++L+ + Sbjct: 230 VQRMFQISGMGDSVPAVPDNPNHDMNRRVELLLLTSR 266 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 67/177 (37%), Gaps = 8/177 (4%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+++ + II++ ++ G+WK+ +ADF LMA F+V+W++N T + Sbjct: 1 MSTNKEAGHG---PTIIRRAHKR-HEEHSGGAWKVAFADFTLALMALFMVLWVMNVTPEK 56 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +K + G+ GIF++++ + D E + + + T Sbjct: 57 ERKQVAAEI--AGRPFFDGGVGIFEQRSRKPVVA--PFDAQQPERVKRRTPGAARERTID 112 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 Q +R S+ + + + + +D + + + P Sbjct: 113 SLQQRRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPQ 169 >gi|182680245|ref|YP_001834391.1| OmpA/MotB domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182636128|gb|ACB96902.1| OmpA/MotB domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 345 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 112/332 (33%), Gaps = 31/332 (9%) Query: 37 YADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96 + D ++ ++ +++++++ + + K L + I D Sbjct: 18 FVDALSTMLL--VIIFLLSVFMLAQF-FLAREVTGKDKALSRLDRQINDLSTLLALEHAA 74 Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 K + K +++ + + + + + + + SL + + Sbjct: 75 KDKAEQETGQLKATLEAAQTAAKAEATRLQELVDAGNQATQSAEDRARLSLRALDAEKQL 134 Query: 157 LCKSTDLEKSINKEENYF-------LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 ++ +++N++ LS + + + ++ DL +++ L+ V + Sbjct: 135 STQAEAQVETLNQQIAALRGQLSSLQETLSASETRDQESRAQIADLGSRLNVALAQKVQE 194 Query: 210 NIVKGVLFETTRTGILISIIDQRNTP---------MFDKSSSIPLPETIVVLQKIGEVLA 260 F +L D R +FD + P L + L Sbjct: 195 LAHYRSDFFGRLRQVLGERPDLRIVGDRFVFQSELLFDSGQARLNPIGRQELDTLATALN 254 Query: 261 HS--------TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 V+ + GHTD ++ NW LS+ RA + L GV DR+ Sbjct: 255 DLVKTIPADLPWVMRVDGHTDKKQIKSVQFPSNWELSVARALAVVHYLTDKGVPPDRL-A 313 Query: 312 ISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 +GF + D + NRRI++ + ++ Sbjct: 314 AAGFGSFQPLDPGDSEEALKRNRRIELKITEK 345 >gi|332981443|ref|YP_004462884.1| OmpA/MotB domain-containing protein [Mahella australiensis 50-1 BON] gi|332699121|gb|AEE96062.1| OmpA/MotB domain protein [Mahella australiensis 50-1 BON] Length = 251 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 63/181 (34%), Gaps = 9/181 (4%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + L + + + + +NI V + IL Sbjct: 61 GGRSMSSVPATGGDEGQDLEQRTNEPQDEFESLYEDMQRYIQQNNIAATVEMTENKMEIL 120 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRN-IA 281 + D +F+ + +P + VL I VL E I I GHTD P + Sbjct: 121 LRFKDN---VLFESGKADIIPSALPVLNNIAGVLKTYKEQIGGVRIEGHTDNVPIHTVMF 177 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 NW LS RA + + ++ + G+ + +D + NRR+DI++ Sbjct: 178 PSNWELSTARAVTVLRYFVERQHLPPEMLSAVGYGEYHPVATNDTIEGRAKNRRVDIVIT 237 Query: 340 D 340 Sbjct: 238 R 238 >gi|167725893|ref|ZP_02409129.1| chemotaxis LafU protein [Burkholderia pseudomallei DM98] gi|167905052|ref|ZP_02492257.1| chemotaxis LafU protein [Burkholderia pseudomallei NCTC 13177] Length = 271 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 78/217 (35%), Gaps = 2/217 (0%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 N Q + D G +S + + + Sbjct: 10 MNVTPEKERKQVAAEIAGRPFFDGGVGIFEQRSRKPVVAPFDAQQPDRMRRRTSGAARER 69 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 LQ + + + V G+ I+I D MF++ S P Sbjct: 70 TIDSLQQRRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPP 129 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVS 305 I +L + VL T + I GHTDA+ + ++ +NW LS RA A QVL G+ Sbjct: 130 FIRLLTALVPVLGTVTNKMVIVGHTDATQYADASVFSNNWNLSSRRALRARQVLADGGMD 189 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 R+ +ISG + +P + NRR+++L+ + Sbjct: 190 AQRMFQISGMGDSVPAVPDNPNHDMNRRVELLLLTSR 226 Score = 38.8 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 47/133 (35%), Gaps = 4/133 (3%) Query: 45 MAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104 MA F+V+W++N T + +K + G+ GIF++++ + D + Sbjct: 1 MALFMVLWVMNVTPEKERKQVAAEI--AGRPFFDGGVGIFEQRSRKPVVA--PFDAQQPD 56 Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 + + + T Q +R S+ + + + + +D + Sbjct: 57 RMRRRTSGAARERTIDSLQQRRALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQ 116 Query: 165 KSINKEENYFLPP 177 + + PP Sbjct: 117 GMFERRSDALNPP 129 >gi|296113807|ref|YP_003627745.1| OmpA/MotB domain protein [Moraxella catarrhalis RH4] gi|295921501|gb|ADG61852.1| OmpA/MotB domain protein [Moraxella catarrhalis RH4] Length = 224 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 8/149 (5%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + GV I++ F + L ++ Sbjct: 80 YMERQAKQIEQQMQGTGVTVTHDTDTGNINLT-MPGNITFAHDDDTLNSAFLGRLNQLAN 138 Query: 258 VLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + E + GHTD++ A N LS RA S L+ GV RI + G+ Sbjct: 139 TMNQYHETTIVIVGHTDST---GQAAYNQELSERRADSVRYYLINQGVDPYRIQTV-GYG 194 Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQG 343 + ++ + NRR+++++ QG Sbjct: 195 IRQPIASNATEAGRAQNRRVELMILAPQG 223 >gi|70734060|ref|YP_257700.1| flagellar motor protein MotB [Pseudomonas fluorescens Pf-5] gi|68348359|gb|AAY95965.1| motility protein, MotB family [Pseudomonas fluorescens Pf-5] Length = 372 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 117/334 (35%), Gaps = 63/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q IIIK+ ++ G+WKI Sbjct: 2 ENNQPIIIKRVKRFA-GGHHGGAWKIA-------------------------FADFATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S +++ ++ I S + Sbjct: 36 MAFFLVLWLLSTATPEQKIAIAGYFKDPIGFS--------------------ESGTPYII 75 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 ++ + + K + +E + E L L +E ++ Sbjct: 76 DLGGSPELAPDNTLNPEIKSQPQPDKVTVDADQVEGMAEQVERERLELLLQELQNKVEEN 135 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +LQ +I LFE T G+ I I+D N PMFD S+ P Sbjct: 136 PQLQKFKDQI----------------LFEITPDGLRIQIMDAENRPMFDSGSARLKPYFE 179 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + ISI GHTDA P+ NW LS +RA +A + L+ G + + Sbjct: 180 DILLAMADTIKTVPNKISISGHTDAKPYSGTGDFGNWELSANRANAARRALVAGGYPDPQ 239 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ GFA L DP N NRRIDI+V ++ Sbjct: 240 VARVVGFASSALFDRKDPFNPVNRRIDIVVLTKK 273 >gi|26991025|ref|NP_746450.1| flagellar motor protein MotD [Pseudomonas putida KT2440] gi|24986055|gb|AAN69914.1|AE016630_5 flagellar motor protein MotB [Pseudomonas putida KT2440] Length = 285 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 73/182 (40%), Gaps = 10/182 (5%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + S+ E E LA L+ ++ + L+ + + Sbjct: 71 EQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGDLINSD---QMTVRGNE 127 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281 I I + ++ +F ++P + +++K+ +L + + G TD P R Sbjct: 128 LWIEIELN---SSLLFGSGDAMPSDKAFAIIEKVASILKPFANPVHVEGFTDNLPIRTAQ 184 Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 NW LS RA S ++L GV+ R++ + G+ ++ ++D + NRR+ +++ Sbjct: 185 YPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQPVASNDTAEGRARNRRVVLVI 243 Query: 339 ED 340 Sbjct: 244 SR 245 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 51/133 (38%), Gaps = 7/133 (5%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N W + YADF+T+L AFF+VM+ I++ ++ K I Q + Sbjct: 2 RRRRHTEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPER 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + K P + + + E + K+S + G + ++ + Sbjct: 62 SMK-------PIPIGDEQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGD 114 Query: 139 QSEHCKNSLTRDS 151 + ++ + Sbjct: 115 LINSDQMTVRGNE 127 >gi|313500883|gb|ADR62249.1| MotB [Pseudomonas putida BIRD-1] Length = 346 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 72/334 (21%), Positives = 118/334 (35%), Gaps = 62/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q II+K+ ++ G+WKI Sbjct: 2 ENNQPIIVKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S +++ Q+ I S + + Sbjct: 36 MAFFLVLWLLSTATPEQKIAIAGYFQDPIGFSESGTP-------------------YVID 76 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + T +++ +E + E L L +E ++ Sbjct: 77 LGGSPEMAPDKTINPEVKTEPTQQSPTQLSKDQVETMAEQVERERLELLLQELQNKVEEN 136 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +LQ +I LFE T+ G+ I I+D N PMFD S+ P Sbjct: 137 PQLQKFKDQI----------------LFEITQDGLRIQIMDAENRPMFDIGSARLQPYFE 180 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + ISI GHTDA P+ NW LS +RA +A + L+ G + + Sbjct: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQ 240 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ G+A L DP N NRRIDI+V ++ Sbjct: 241 VARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKK 274 >gi|152984991|ref|YP_001349219.1| flagellar motor protein MotD [Pseudomonas aeruginosa PA7] gi|150960149|gb|ABR82174.1| probable chemotaxis protein [Pseudomonas aeruginosa PA7] Length = 296 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 63/176 (35%), Gaps = 7/176 (3%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + P + + L + S + I I+ Sbjct: 71 EERPRTTEPERTSVEEQPSDNAASADSLQQIADSVRGAFGDLIASDQLSVRGNELWIEIT 130 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWR 286 + ++ +F ++P +++K+ ++LA I + G TD P + NW Sbjct: 131 LN---SSLLFPSGDALPNDAAFGIVEKVAKILAPYKNPIHVEGFTDDVPIHSQRYPTNWE 187 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 LS RA S ++L GV R++ + G+ + + + NRR+ +++ Sbjct: 188 LSAARAASIVRLLGNDGVEPSRMAAV-GYGEFQPVADNASAAGRAKNRRVVLVISR 242 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 39/94 (41%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N W + YADF+T+L AFF+VM+ I++ ++ K + + Sbjct: 3 RRRRHQEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSETLTGVFNQPDR 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 + K I + P + + + S D Sbjct: 63 SLKPIPIGEERPRTTEPERTSVEEQPSDNAASAD 96 >gi|15596658|ref|NP_250152.1| flagellar motor protein MotD [Pseudomonas aeruginosa PAO1] gi|107100895|ref|ZP_01364813.1| hypothetical protein PaerPA_01001925 [Pseudomonas aeruginosa PACS2] gi|116049406|ref|YP_791791.1| flagellar motor protein MotD [Pseudomonas aeruginosa UCBPP-PA14] gi|254234559|ref|ZP_04927882.1| MotD [Pseudomonas aeruginosa C3719] gi|254239810|ref|ZP_04933132.1| MotD [Pseudomonas aeruginosa 2192] gi|313106460|ref|ZP_07792691.1| chemotaxis protein, MotD [Pseudomonas aeruginosa 39016] gi|9947413|gb|AAG04850.1|AE004575_9 MotD [Pseudomonas aeruginosa PAO1] gi|3721573|dbj|BAA33552.1| ORF2 [Pseudomonas aeruginosa] gi|115584627|gb|ABJ10642.1| chemotaxis protein, MotD [Pseudomonas aeruginosa UCBPP-PA14] gi|126166490|gb|EAZ52001.1| MotD [Pseudomonas aeruginosa C3719] gi|126193188|gb|EAZ57251.1| MotD [Pseudomonas aeruginosa 2192] gi|310879193|gb|EFQ37787.1| chemotaxis protein, MotD [Pseudomonas aeruginosa 39016] Length = 296 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 64/176 (36%), Gaps = 7/176 (3%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 ++ P + + L + S + I I+ Sbjct: 71 DERPRTTEPERTSVEEQPSDNAASADSLERIADSVRDAFGDLIASDQLSVRGNELWIEIT 130 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWR 286 + ++ +F ++P +++K+ ++LA I + G TD P + NW Sbjct: 131 LN---SSLLFPSGDALPNDAAFDIVEKVAKILAPYKNPIHVEGFTDDVPIHSPRYPTNWE 187 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 LS RA S ++L GV R++ + G+ + + + NRR+ +++ Sbjct: 188 LSAARAASIVRLLGNDGVEPSRMAAV-GYGEFQPVADNASAEGRAKNRRVVLVISR 242 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N W + YADF+T+L AFF+VM+ I++ ++ K + + Sbjct: 3 RRRRHQEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSETLTGVFNQPDR 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 + K P + + + S + ++ + F Sbjct: 63 SLK-------PIPIGDERPRTTEPERTSVEEQPSDNAASADSLERIADSVRDAF 109 >gi|293395565|ref|ZP_06639848.1| chemotaxis MotB protein [Serratia odorifera DSM 4582] gi|291421884|gb|EFE95130.1| chemotaxis MotB protein [Serratia odorifera DSM 4582] Length = 330 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 3/180 (1%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224 + + L + + RL L +++ + + +L G+ Sbjct: 86 GDDPTQLEGLVRKQLDSPEKQAEELRLNKLRERLDELIESDPRLKALRPHLLINMMDEGL 145 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN--IAR 282 I IID +N PMF S+ +L+ I +L IS+ GHTD P+ Sbjct: 146 RIQIIDSQNRPMFTTGSAQVESYMRDILRAIAPILNDLPNKISLSGHTDDLPYATGERYY 205 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 NW LS DRA ++ + L+ G+SE ++ ++ G A ++ NRRI ILV ++Q Sbjct: 206 SNWELSADRANASRRELIAGGLSEGKVLRVVGMAATMSLKQHGADDAINRRITILVLNKQ 265 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 57/165 (34%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +I+ +K ++ GSWKI YADFMT +MAFFLVMW++ I +YF Sbjct: 3 QNHPVILVRKRKAHQVAHHGGSWKIAYADFMTAMMAFFLVMWLLAIASPQELTQIAEYFR 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 K +T E +P + L +S + + K +RL+ Sbjct: 63 TPLKVALTTGNKSSSESSPIPGGGDDPTQLEGLVRKQLDSPEKQAEELRLNKLRERLDEL 122 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 I + D + S + Sbjct: 123 IESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFTTGSAQVES 167 >gi|218892666|ref|YP_002441535.1| flagellar motor protein MotD [Pseudomonas aeruginosa LESB58] gi|218772894|emb|CAW28706.1| MotD [Pseudomonas aeruginosa LESB58] Length = 296 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 64/176 (36%), Gaps = 7/176 (3%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 ++ P + + L + S + I I+ Sbjct: 71 DERPRTTEPERTSVEEQPSDNAASADSLERIADSVRDAFGDLIASDQLSVRGNELWIEIT 130 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWR 286 + ++ +F ++P +++K+ ++LA I + G TD P + NW Sbjct: 131 LN---SSLLFPSGDALPNDAAFDIVEKVAKILAPYKNPIHVEGFTDDVPIHSPRYPTNWE 187 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 LS RA S ++L GV R++ + G+ + + + NRR+ +++ Sbjct: 188 LSAARAASIVRLLGNDGVEPSRMAAV-GYGEFQPVADNASAEGRAKNRRVVLVISR 242 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N W + YADF+T+L AFF+VM+ I++ ++ K + + Sbjct: 3 RRRRHQEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSETLTGVFNQPDR 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 + K P + + + S + ++ + F Sbjct: 63 SLK-------PIPIGDERPRTTEPERTSVEEQPSDNAASADSLERIADSVRDAF 109 >gi|296390172|ref|ZP_06879647.1| flagellar motor protein MotD [Pseudomonas aeruginosa PAb1] Length = 296 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 65/176 (36%), Gaps = 7/176 (3%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 ++ P + + + L + S + I I+ Sbjct: 71 DERPRTTEPERTSVEEQPSDNAASVDSLERIADSVRDAFGDLIASDQLSVRGNELWIEIT 130 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWR 286 + ++ +F ++P +++K+ ++LA I + G TD P + NW Sbjct: 131 LN---SSLLFPSGDALPNDAAFDIVEKVAKILAPYKNPIHVEGFTDDVPIHSPRYPTNWE 187 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 LS RA S ++L GV R++ + G+ + + + NRR+ +++ Sbjct: 188 LSAARAASIVRLLGNDGVEPSRMAAV-GYGEFQPVADNASAEGRAKNRRVVLVISR 242 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 2/124 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N W + YADF+T+L AFF+VM+ I++ ++ K + + Sbjct: 3 RRRRHQEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSETLTGVFNQPDR 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + K I P + S++E + N+ + + I S Sbjct: 63 SLKPIPIGDERPRTTE--PERTSVEEQPSDNAASVDSLERIADSVRDAFGDLIASDQLSV 120 Query: 139 QSEH 142 + Sbjct: 121 RGNE 124 >gi|26991582|ref|NP_747007.1| flagellar motor protein MotB [Pseudomonas putida KT2440] gi|24986670|gb|AAN70471.1|AE016688_10 motility protein, MotB family [Pseudomonas putida KT2440] Length = 346 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 71/334 (21%), Positives = 118/334 (35%), Gaps = 62/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q II+K+ ++ G+WKI Sbjct: 2 ENNQPIIVKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S +++ Q+ I S + + Sbjct: 36 MAFFLVLWLLSTATPEQKIAIAGYFQDPIGFSESGTP-------------------YVID 76 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + T +++ +E + E L L +E ++ Sbjct: 77 LGGSPEMAPDKTINPEVKTEPTQQSPTQLSKDQVETMAEQVERERLELLLQELQNKVEEN 136 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +LQ +I LFE T+ G+ I I+D N PMFD S+ P Sbjct: 137 PQLQKFKDQI----------------LFEITQDGLRIQIMDAENRPMFDIGSARLQPYFE 180 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + +SI GHTDA P+ NW LS +RA +A + L+ G + + Sbjct: 181 DILLAMADTIKAVPNKVSISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQ 240 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ G+A L DP N NRRIDI+V ++ Sbjct: 241 VARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKK 274 >gi|306813285|ref|ZP_07447478.1| hypothetical protein ECNC101_15272 [Escherichia coli NC101] gi|305854048|gb|EFM54487.1| hypothetical protein ECNC101_15272 [Escherichia coli NC101] Length = 307 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 119/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H+ K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + KI L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G DRA SA +VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------------DRALSARRVLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271 >gi|293403376|ref|ZP_06647467.1| hypothetical protein ECGG_04086 [Escherichia coli FVEC1412] gi|298378988|ref|ZP_06988869.1| chemotaxis protein MotB [Escherichia coli FVEC1302] gi|291429229|gb|EFF02249.1| hypothetical protein ECGG_04086 [Escherichia coli FVEC1412] gi|298280101|gb|EFI21605.1| chemotaxis protein MotB [Escherichia coli FVEC1302] Length = 318 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 119/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 12 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 71 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 72 ERESIIAALH---------------GQSIFNGGGLSPLNKIRPSHPPKPATVAVPEETEK 116 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K + N + + K S T E + E +P + Sbjct: 117 K----------AHDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 166 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + +I L+ + P+FD Sbjct: 167 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 203 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G DRA SA +VL Sbjct: 204 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------------DRALSARRVLE 241 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 242 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 282 >gi|260467043|ref|ZP_05813223.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075] gi|259029152|gb|EEW30448.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075] Length = 343 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 116/330 (35%), Gaps = 30/330 (9%) Query: 37 YAD-FMTVLMAFFLVMWIINATDDDTK---KAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 + D T+L+A +M+++ + I + L + + Sbjct: 19 FVDALSTLLLA---IMFLLTVFVLAQFLLGREISGK-DTALSRLNSQINELTQLLALERS 74 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 ++Q+K D + + ++ + + Q + + N + Sbjct: 75 TAQDKDDSLANLQASLSAAEAEKSRLEQLLAQGAGAGDAANQRAAALGGELDNQRQISQQ 134 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + ++ K+ L+ + ++ DL ++++ L+ V + Sbjct: 135 ALSQVEILNQQIAALRKQIGALEDALNVSETRDRDSNTKIADLGRRLNVALAQRVQELNR 194 Query: 213 ---------KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---- 259 + +L + I+ ++ +F S + V ++K+ + + Sbjct: 195 YRSDFFGRLREILADRENIRIVGDRFVFQSEVLFPTGSEVINDAGKVEMKKLADAIIELQ 254 Query: 260 ----AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 V+ + GHTD P RDNW LS R+ S + L+++GV +R+ Sbjct: 255 KEIPPEINWVLRVDGHTDNKPLSGTGRYRDNWELSTARSTSVVKFLIENGVPANRLVAA- 313 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDR 341 GF + +D + NRRI++ + +R Sbjct: 314 GFGEFQPLDPADTEEARNKNRRIELKLTER 343 >gi|148549982|ref|YP_001270084.1| flagellar motor protein MotB [Pseudomonas putida F1] gi|148514040|gb|ABQ80900.1| OmpA/MotB domain protein [Pseudomonas putida F1] Length = 346 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 72/334 (21%), Positives = 118/334 (35%), Gaps = 62/334 (18%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 EN+Q II+K+ ++ G+WKI Sbjct: 2 ENNQPIIVKRVKRFG-GGHHGGAWKIA-------------------------FADFATAM 35 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L S +++ Q+ I S + + Sbjct: 36 MAFFLVLWLLSTATPEQKIAIAGYFQDPIGFSESGTP-------------------YVID 76 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + T +++ +E + E L L +E ++ Sbjct: 77 LGGSPEMAPDKTINPEVKTEPTQQSPTQLNKDQVETMAEQVERERLELLLQELQNKVEEN 136 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +LQ +I LFE T+ G+ I I+D N PMFD S+ P Sbjct: 137 PQLQKFKDQI----------------LFEITQDGLRIQIMDAENRPMFDIGSARLQPYFE 180 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + + + ISI GHTDA P+ NW LS +RA +A + L+ G + + Sbjct: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQ 240 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++++ G+A L DP N NRRIDI+V ++ Sbjct: 241 VARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKK 274 >gi|326564485|gb|EGE14711.1| OmpA/MotB domain protein [Moraxella catarrhalis 46P47B1] gi|326568376|gb|EGE18456.1| OmpA/MotB domain protein [Moraxella catarrhalis BC7] gi|326572277|gb|EGE22272.1| OmpA/MotB domain protein [Moraxella catarrhalis BC8] gi|326574291|gb|EGE24238.1| OmpA/MotB domain protein [Moraxella catarrhalis O35E] gi|326574875|gb|EGE24805.1| OmpA/MotB domain protein [Moraxella catarrhalis 101P30B1] Length = 224 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 8/184 (4%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + ++ K A+ + + GV Sbjct: 45 VAGALGGTAISKATGGEKTGRDAILGAAVGAAAGAYMERQAKQIEQQMQGTGVTVTHDTD 104 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIA 281 I++ F + L ++ + E + GHTD++ A Sbjct: 105 TGNINLT-MPGNITFAHDDDTLNSAFLGRLNQLANTMNQYHETTIVIVGHTDST---GQA 160 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 N LS RA S L+ GV RI + G+ + ++ + NRR+++++ Sbjct: 161 AYNQELSERRADSVRYYLINQGVDPYRIQTV-GYGIRQPIASNATEAGRAQNRRVELMIL 219 Query: 340 DRQG 343 QG Sbjct: 220 APQG 223 >gi|115373102|ref|ZP_01460404.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1] gi|310824354|ref|YP_003956712.1| chemotaxis protein MotB [Stigmatella aurantiaca DW4/3-1] gi|115369858|gb|EAU68791.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1] gi|309397426|gb|ADO74885.1| chemotaxis protein MotB [Stigmatella aurantiaca DW4/3-1] Length = 273 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 78/212 (36%), Gaps = 9/212 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 Q E L + + N+E L+K + K+ L+ + Sbjct: 64 EQDKEALATRLATSESRLTASAAERSALERKNEELKALNDELAKNTRRLAEAKEALEKRS 123 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + + + + + + D+ +F S+ E L KI Sbjct: 124 AEYENLAQSLKQEISDGKIQLSELQGRMTVQLKDK---ILFASGSTRVGKEGQEALAKIA 180 Query: 257 EVLAHSTEVI-SIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + L I + GHTD P NW LSL RA + + L +GV + + Sbjct: 181 DALKSVQGRIIRVEGHTDDVPTDKNGPFPSNWELSLARAMAVVRALQDAGVDPT-VLSAA 239 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 G+ ++ A+D + NRRI+I++ + G Sbjct: 240 GYGQYQPIAANDSAENRSLNRRIEIVLAAKAG 271 >gi|315225528|ref|ZP_07867338.1| OmpA-OmpF porin family protein [Capnocytophaga ochracea F0287] gi|314944472|gb|EFS96511.1| OmpA-OmpF porin family protein [Capnocytophaga ochracea F0287] Length = 456 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 84/274 (30%), Gaps = 16/274 (5%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + + GI + +R D +LK ++ Sbjct: 183 DYFQHAAGITIKFGKKDRDKDGVADKDDLCPDEPGKPELKGCPDRDNDGVADKDDACPDE 242 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + + + C + D C N + + ++ Sbjct: 243 AGKPELKGCPDRDNDGIADKDDACPDEAGPAEFNGCPDTDGDGVPDNVDQCKDVAGPKEN 302 Query: 195 LAKKISSTLSGLVADNIVKGVLFE---------TTRTGILISIIDQRNTPMFDKSSSIPL 245 T V D + V + + D T +FD + + Sbjct: 303 NGCPWPDTDGDGVLDKDDQCVDVPGPASNNGCPEVTEEVQKKLNDFARTILFDVNKATIK 362 Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P++ VL +I +VL SI G+TD N +LS DRAYS L++ G+ Sbjct: 363 PQSATVLNQIVDVLNQYKNAKFSIEGYTD---ISGKRDKNQKLSEDRAYSVKAYLIEKGI 419 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 E R++ GF + ++ NRR++I Sbjct: 420 DEGRLTA-KGFGPDKPIASNKTKKGRELNRRVEI 452 >gi|325981887|ref|YP_004294289.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212] gi|325531406|gb|ADZ26127.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212] Length = 264 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 76/188 (40%), Gaps = 10/188 (5%) Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 ++ + ++ + +++++++ +AK I L LV + V Sbjct: 70 PQTSEFSPLQNGHSNQDSLIKLADNFSTQKARKQEKMKGMAKNILHALEPLVKNG---QV 126 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275 GI + I +F + +I+ LQ I V+ I++ GHTD Sbjct: 127 RVTQNSLGITVEINAS---VLFSPGQAKLAENSILSLQAIANVIKGHEHEINVEGHTDNL 183 Query: 276 PFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332 P NW LS RA S ++ ++ GV R++ I G+ +R +++ NR Sbjct: 184 PINTENFPSNWELSSARASSVIRLFIEKGVEAHRLTAI-GYGENRPIESNETFEGRKRNR 242 Query: 333 RIDILVED 340 R+ +++ Sbjct: 243 RVTVMIMS 250 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 34/76 (44%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 I ++K + N W + Y+DF+T+L AFF+VM+ +++ +D + + KN Sbjct: 2 INRRKKINESPLENQERWLVSYSDFITLLFAFFVVMYAVSSVNDGKYRVLSSSLVTAFKN 61 Query: 76 LMTASKGIFDEQNPPE 91 ++ Sbjct: 62 SSSSISESPQTSEFSP 77 >gi|254517026|ref|ZP_05129084.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3] gi|219674531|gb|EED30899.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3] Length = 270 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 75/222 (33%), Gaps = 7/222 (3%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 ++ L ++I + D L ++ Sbjct: 43 GDFRVLSDSIVQAFGLPGVSFDPSRPNGDGTSSSRLGIPQAAVADEAPRVPLQSAANART 102 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 A+ Q++ ++ + + + I I + +F S Sbjct: 103 PEAALGDIASEQEMTGVEAAVQTSIGDLIAPDRFAVTGNDKWLEIKIPARM---LFPSGS 159 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLM 300 L +I +L+++ + L + ++GHTD P R NW LS RA + +V Sbjct: 160 RSLLASSIPMLRRLADTLKALPNEVVVQGHTDNQPIRNGQFPSNWELSTARAAAIARVFE 219 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + GV ++S + GF +R + + NRR+ +LV Sbjct: 220 EEGVDPVKLSAV-GFGPNRPIADNASEEGRAENRRVVVLVRS 260 >gi|315644424|ref|ZP_07897557.1| OmpA/MotB domain protein [Paenibacillus vortex V453] gi|315280174|gb|EFU43467.1| OmpA/MotB domain protein [Paenibacillus vortex V453] Length = 273 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 84/218 (38%), Gaps = 9/218 (4%) Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + S+ T + K L + +K + +P + ++ A Sbjct: 43 DARKFQEMSEAFSVALTGGTGVLDYSKTLPSEDPPNVNDHKASSPNVPATTPDQRRAELM 102 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ +DL K + + + + + + + ++I+I D +F ++ PE Sbjct: 103 RQEQEDLEKLKKQLDNYIKNNGLTSELSTKLNHSQLVITIRDN---ALFPSGEAVVKPEA 159 Query: 249 IVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRAYS-AYQVLMKSGVS 305 + + I ++L + I + GHTD P N NW LS DRA +L S + Sbjct: 160 RKLAKAISQMLHKFPDYEIIVSGHTDNVPIANSRYPSNWDLSSDRALQFMKILLTNSALD 219 Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 R I G+ + + + NRR+++ + + Sbjct: 220 PKRFMPI-GYGEYHPIADNKTEAGRAKNRRVEVSIIRK 256 >gi|94495402|ref|ZP_01301982.1| flagellar motor component [Sphingomonas sp. SKA58] gi|94424790|gb|EAT09811.1| flagellar motor component [Sphingomonas sp. SKA58] Length = 350 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 91/230 (39%), Gaps = 1/230 (0%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 +K + L + + K SI + Sbjct: 58 TTEKQRKALADYFTPTLVELKMASAGSTGLMGGDSLTGKDNYPTTGGVGNLSITIPRDAT 117 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 K + +++ + + K + + ++ + K V F TR G+ I +ID+ + Sbjct: 118 GTKDQGGKAMRAADRQKFESIKKDLEARMNRKGLSRLRKNVRFTETREGLRIDLIDEADF 177 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAY 293 MF + +PE ++ ++ VL + +RGHTDA P+ A +NWRLS RA Sbjct: 178 AMFAMGTDRLVPEARALVGEVASVLKTMPNDLIVRGHTDALPYASGKAMNNWRLSSARAE 237 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 S Q L SG+ R ++I G A + + + NRR+ I++ +G Sbjct: 238 STRQALADSGIGNPRFARIEGVADREPFVKDNRYDPRNRRMSIILGWSRG 287 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 61/147 (41%) Query: 3 SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62 N+ + +I+KK + ++ G+WK+ YADF+T +MAFFL+MW++ AT + + Sbjct: 4 KKRGANEPEPRPVIVKKIIVEGHGGHHGGAWKVAYADFVTAMMAFFLLMWLLGATTEKQR 63 Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 KA+ YF P L AS G + ++ + ++ T + Sbjct: 64 KALADYFTPTLVELKMASAGSTGLMGGDSLTGKDNYPTTGGVGNLSITIPRDATGTKDQG 123 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTR 149 + + ++ + + Sbjct: 124 GKAMRAADRQKFESIKKDLEARMNRKG 150 >gi|91204077|emb|CAJ71730.1| similar to flagellar motor protein B [Candidatus Kuenenia stuttgartiensis] Length = 215 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 12/185 (6%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 N++ + L L +E R + ++ ++ L + G + + + I Sbjct: 35 ENQQLSQSLASLQQENANLSATASRYESELNRLENSRRDLESKLAGTGAITKIKDGSVSI 94 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPF---RNIA 281 + D +FD + ++ L+KI +L S E++ I GHTD+ P ++ Sbjct: 95 VLPDS---ILFDPGQTKLREQSKATLKKIAGILKTDISNEMVRIEGHTDSDPIQKQKDKY 151 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 NW LS RA S L+ G+S R+ ++GF + + + NRR++ ++ Sbjct: 152 PSNWELSTARANSVLHYLVDECGISPTRVY-VAGFGQFQPISDNKTKAGKAQNRRVEFVI 210 Query: 339 EDRQG 343 G Sbjct: 211 ISGGG 215 >gi|332291582|ref|YP_004430191.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332169668|gb|AEE18923.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 327 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 113/313 (36%), Gaps = 24/313 (7%) Query: 49 LVMWIINATD----DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104 L++ I+A K +E ++ K+ + + D + ++ ++ +S D Sbjct: 7 LIILAISALTSCVPAKKFKDLEASYSRLRKDNRSLEDNVKDLKAELDKRNEIYDKVSKDL 66 Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 + V+ G K + S S + ++ + +L + Sbjct: 67 ATSMTRVEELEGENASAKANLEQLQASYNALESNSSATIAENSQKNRQLLAELETKQNDL 126 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLA----------KKISSTLSGLVADNIVKG 214 L K + +R R+ +L + + ++S + D KG Sbjct: 127 AEKTAALEAERTRLEKLQKDLAERSARVDELEGVIAAKDATMRVLKESISKALTDFEGKG 186 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTD 273 + E + +S+ N +FD S ++++G VLA + ++ I GHTD Sbjct: 187 LTVEQRDGKVYVSL---ENKLLFDSGSWTVGANGTKAVKQLGSVLADNPDIAVLIEGHTD 243 Query: 274 ASPFRNIA--RDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN-- 328 P+ NW LS RA + ++L + ++ G + +D Sbjct: 244 NVPYGGSGNLAGNWDLSAKRATAIVEILRTNRDIDPKNLTAA-GRGEYAPVAENDTAENK 302 Query: 329 SANRRIDILVEDR 341 + NRRI++++ + Sbjct: 303 AKNRRIEVILTPK 315 >gi|163857259|ref|YP_001631557.1| OmpA-family protein [Bordetella petrii DSM 12804] gi|163260987|emb|CAP43289.1| OmpA-family protein [Bordetella petrii] Length = 334 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 88/239 (36%), Gaps = 8/239 (3%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 S+ + + L + + + L + D + Sbjct: 92 GSIARAGAAPAGQAPAHALLAALLPMPELPEQAELPGLAAALPVPATALAPAGDSPAAPA 151 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + + + + + + + +++ L D++ GV I I Sbjct: 152 ANLRQTSDDAAGGEPPSAPKIEPEPEPTQPEPPSIAELGLDDLGDGVDVIVNEKSISFRI 211 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR-DNWR 286 N +F ++ P + ++ ++ +V+ S +S+ GH+D P + NW Sbjct: 212 ---SNELLFPSGQAVLSPAGLGLISRMAKVINRSQGYPVSVEGHSDPVPIQTRQFPSNWE 268 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 LS RA S + L++ GV R+ + G+A ++D +ANRR+++++E G Sbjct: 269 LSAGRATSVLRELVRDGVDPGRLRAV-GYADTHPIASNDTPQGRAANRRVELIMEITPG 326 >gi|119897401|ref|YP_932614.1| flagellar motor protein MotD [Azoarcus sp. BH72] gi|119669814|emb|CAL93727.1| flagellar motor protein MotB [Azoarcus sp. BH72] Length = 279 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 10/196 (5%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 +E G+ + S +E+ + +R++++A++I L+ L D Sbjct: 63 NESGQQIVLPPVSVMSPAAPAPAASTRSPEEEAKRQQTAQRMRNMAEEIRRVLAPLTQDG 122 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 V GI + I +F + + L+ + +VLA + I+I G Sbjct: 123 ---QVSISEGAFGIAVEINAS---VLFAPGEATLGAPAVSALRAVAQVLAGAEFPITIEG 176 Query: 271 HTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327 HTD P N NW LS RA S ++ ++SGV +R++ G+A R +D Sbjct: 177 HTDNIPISNLRFPSNWELSAVRASSVVRLFIESGVRAERLTAA-GYADQRPVAGNDTDAG 235 Query: 328 NSANRRIDILVEDRQG 343 + NRR+ I++E R G Sbjct: 236 RARNRRVTIMIESRVG 251 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 54/170 (31%), Gaps = 3/170 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ ++D N W + YADF+T+L AFF+VM+ +++ ++ + + +++ Sbjct: 3 RRRKLEDEHENHERWLVSYADFITLLFAFFVVMYSLSSINEGKYRVLSDSLVQAFRSINI 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 G +Q S T++ + ++ E L+ Sbjct: 63 NESG---QQIVLPPVSVMSPAAPAPAASTRSPEEEAKRQQTAQRMRNMAEEIRRVLAPLT 119 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 Q S + + ++LA Sbjct: 120 QDGQVSISEGAFGIAVEINASVLFAPGEATLGAPAVSALRAVAQVLAGAE 169 >gi|333003303|gb|EGK22849.1| chemotaxis protein motB [Shigella flexneri K-218] Length = 265 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 3/202 (1%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 ++T + + + E++ + RL+ L + + Sbjct: 24 ATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRGDLDQLI 83 Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + + + + G+ I IID +N PMF S+ P +L+ I VL Sbjct: 84 ESDPKLRALRLHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGI 143 Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 IS+ GHTD P+ + NW LS DRA ++ + LM G+ ++ ++ G A Sbjct: 144 PNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMR 203 Query: 321 KIASDPMNSANRRIDILVEDRQ 342 P ++ NRRI +LV ++Q Sbjct: 204 LSDRGPDDAVNRRISLLVLNKQ 225 >gi|148258147|ref|YP_001242732.1| hypothetical protein BBta_6939 [Bradyrhizobium sp. BTAi1] gi|146410320|gb|ABQ38826.1| Putative flagellar motor protein MotB [Bradyrhizobium sp. BTAi1] Length = 342 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 103/343 (30%), Gaps = 25/343 (7%) Query: 19 KKVAIDDTPNNLGSWKIVYAD-FMTV------LMAFFLVMWIINATDDDTKKAIEQYFNP 71 + D N + D T+ L+ FLV+ + + K + N Sbjct: 5 RTRRGDSGLNYWPG----FVDALSTLVLSIVFLLTVFLVVQFFLSQEVTGKDKALEQLNA 60 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 L + + + ++ V N Sbjct: 61 KIAQLNEMLSLEKLGKLSLDDQVAQLRAGLANAEAERDRVKGLYDGLASAGSNAAGRTNE 120 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + + ++ + + + ++ + + + R Sbjct: 121 LNRALDSEKQVTARAMAQIEVLNQQISALRRQLAALEDALDASEKRDKESQNRIADLGSR 180 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETI 249 L + L+ ++ + R I + ++ FD + LPE Sbjct: 181 LNVALAQRVQELTRYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGQ 240 Query: 250 VVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM 300 L + L A + V+ + GHTD P + + NW LS RA S Q L+ Sbjct: 241 QELNSVATALVDLDKQIPAEISWVLRVDGHTDVRPINSPVFKSNWELSSARAISVVQYLI 300 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 GV R+ GFA + + ++ NRRI++ + +R Sbjct: 301 SLGVPAQRLVAA-GFAEFQPLDPGNTEDAFRRNRRIELKLTER 342 >gi|332702472|ref|ZP_08422560.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332552621|gb|EGJ49665.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 239 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 71/186 (38%), Gaps = 13/186 (6%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 D + + A+ R+ Q + I S L + V F+ Sbjct: 53 DEIAGSMQTALKPSEARKSDLREAVTRELDRQATLEHIISDLQQRFRGEAAEHVQFQLRP 112 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNI 280 + I++ FD S+ P+ + +L+KIG VL +++ GHTD P Sbjct: 113 GAVAINLH---GPAFFDSGSAELTPDAVRMLRKIGVVLVGVPYHLTVEGHTDNVPIQTGA 169 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--------ANR 332 NW LS RA + L+ GV D + I G A R + ++ + NR Sbjct: 170 FDSNWELSALRATRVARFLISQGVRPDNMK-IVGLADTRPLLPNNDASGAALPENQTRNR 228 Query: 333 RIDILV 338 R+ ILV Sbjct: 229 RVVILV 234 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 ++ +D W + AD MT+L+ FF+++ I+ D I K Sbjct: 11 RRRRMDQE--GGEDWHLSLADMMTLLLCFFVLLASISQVDYTLFDEIAGSMQTALK 64 >gi|167629589|ref|YP_001680088.1| flagellar motor protein motb, putative [Heliobacterium modesticaldum Ice1] gi|167592329|gb|ABZ84077.1| flagellar motor protein motb, putative [Heliobacterium modesticaldum Ice1] Length = 298 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 78/210 (37%), Gaps = 11/210 (5%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + SQ +L + E + E P + ++K + LQ+ Sbjct: 36 AVSQVDTKKFEALKKAMESVFKGGSGIMANPTPLDTEGASDAPPDMSVMESLKETRDLQE 95 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + ++ + + K V R G+ IS D +FD + E + L Sbjct: 96 IKNRVDRYIEE---KGLEKQVETNLVREGLQISFRDA---ALFDSGKADLKREALPALDL 149 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV-LMKSGVSEDRISKI 312 I + L + + + I GHTD P NW LS RA + + L + + + + Sbjct: 150 IADTLHNLSNEVRIAGHTDNLPISTAEFPSNWDLSAKRALNVMKYILNDKRNNPVKFTAV 209 Query: 313 SGFAHHRLKIASDP--MNSANRRIDILVED 340 G+ + K +D + NRR+++++ Sbjct: 210 -GYGEYHPKATNDTPEGRAQNRRVEVMIIR 238 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 37/95 (38%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W I YAD +T+L+A F+VM+ ++ D +A+++ K Sbjct: 3 KKKQHHEEHIDETWLIPYADMLTLLLALFIVMFAVSQVDTKKFEALKKAMESVFKGGSGI 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 + + + T++ ++K Sbjct: 63 MANPTPLDTEGASDAPPDMSVMESLKETRDLQEIK 97 >gi|116620394|ref|YP_822550.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116223556|gb|ABJ82265.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 545 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 80/223 (35%), Gaps = 11/223 (4%) Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178 +Q+++ Q + + +Q+E K + E++ Sbjct: 314 DQQRRAQAEADQRASETARRQAEQAKLEADNARASAEKAAADAARERAAADAARLAAEQQ 373 Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + + R K+ A+ + L + + + + T G++I+I D +FD Sbjct: 374 QQAAMAEADRAKQGMQKAEAEKAELRERLRNQLNMILETRETARGLIINISD----VLFD 429 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + P L K+ +L I + GHTD+ N +LS RA S Sbjct: 430 FNKYTLKPGAREKLAKVSGILLAYPGLNIKVEGHTDSI---GSDEYNQKLSESRASSVRD 486 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 L V D +S + G ++D NRR++++V Sbjct: 487 YLTSQNVPADSVSAV-GLGKSDPVASNDTAAGRQRNRRVELVV 528 >gi|2853603|gb|AAC08067.1| MotB [Pseudomonas putida] Length = 285 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 10/182 (5%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + S+ E E LA L+ ++ + L+ N + Sbjct: 71 EQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGDLINSN---QMTVRGNE 127 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281 I I + ++ +F ++P + ++ K+ +L + + G TD P R Sbjct: 128 LWIEIEL---SSSLLFGSGDAMPSDKAFAIIDKVASILKPFANPVHVEGFTDNLPIRTAQ 184 Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 NW LS RA S ++L GV+ R++ + G+ ++ +D + NRR+ +++ Sbjct: 185 YPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQPVAGNDTAEGRARNRRVVLVI 243 Query: 339 ED 340 Sbjct: 244 SR 245 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 2/113 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N W + YADF+T+L AFF+VM+ I++ ++ K I Q + Sbjct: 2 RRRRHTEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPER 61 Query: 79 ASKGIF--DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + K I DEQ R ++ + S + ++ T + Sbjct: 62 SMKPIPIGDEQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGD 114 >gi|296114560|ref|ZP_06833213.1| hypothetical protein GXY_02241 [Gluconacetobacter hansenii ATCC 23769] gi|295978916|gb|EFG85641.1| hypothetical protein GXY_02241 [Gluconacetobacter hansenii ATCC 23769] Length = 321 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 109/327 (33%), Gaps = 38/327 (11%) Query: 32 SWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 +W Y D T+LM F++ + + ++ + +L Sbjct: 16 AWPG-YVDALSTLLMVIIFVLLVFVLGQAFLSVALNKRQQVLDQLQREVAHLSQMLSLEQ 74 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 + E+S + T S+ ++ +++ + Sbjct: 75 SHNHSLEQSVATLQKEHAADEATTTSLTAQVS-----------------QQAAERDDARH 117 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 + +++ + + + ++ +N K L M+ L +++ S Sbjct: 118 QADELNNQLAQLSAQLAAVSTALEISQNEVHDRDRKLDNLGMQLNIALAQKVEQLQRYRS 177 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-- 262 + VL +T ++ ++ +F S+ PE I ++ +G L Sbjct: 178 EFFGRL--RDVLKDTKGIQVVGDRFVFQSEVLFPVGSADLSPEGIQEIKVLGRTLKQVAQ 235 Query: 263 ------TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 ++ + GH D P NW LS RA + ++L+ G+S R +GFA Sbjct: 236 QIPPSVPWILRVDGHADRLPIHTAFPSNWELSSARAITVVKMLIADGISP-RHLAATGFA 294 Query: 317 HHRLKIASDPMN--SANRRIDILVEDR 341 + + NRRI+ + DR Sbjct: 295 DFQPLDNGTTAEAFARNRRIEFRLTDR 321 >gi|293410200|ref|ZP_06653776.1| motB [Escherichia coli B354] gi|291470668|gb|EFF13152.1| motB [Escherichia coli B354] Length = 241 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 3/200 (1%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS- 204 ++T + + + E++ + RL+ L + + Sbjct: 2 AVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRGDLDQLIES 61 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 + + + + G+ I IID +N PMF S+ P +L+ I VL Sbjct: 62 DPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPN 121 Query: 265 VISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 IS+ GHTD P+ + NW LS DRA ++ + LM G+ ++ ++ G A Sbjct: 122 RISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLS 181 Query: 323 ASDPMNSANRRIDILVEDRQ 342 P ++ NRRI +LV ++Q Sbjct: 182 DRGPDDAVNRRISLLVLNKQ 201 >gi|187932715|ref|YP_001887659.1| chemotaxis protein MotB [Clostridium botulinum B str. Eklund 17B] gi|187720868|gb|ACD22089.1| putative chemotaxis MotB protein [Clostridium botulinum B str. Eklund 17B] Length = 244 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 11/164 (6%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 M ++L K+ + N+ V + G++IS D F+ + Sbjct: 78 DAVMVESEKLDTAKSKVDELIKEY---NLEGRVSTQIQERGLIISFNDN---VFFNSGDA 131 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 E L I ++L I + G+TD NW+LS RA + ++L+K Sbjct: 132 TIKSEYKQKLISISKILNDIDNYIRVEGNTDNVAINTENFHSNWQLSAIRAANVVELLVK 191 Query: 302 SG-VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 G ++ D++S I G+ +R ++D NRR+DI++ + + Sbjct: 192 EGNINSDKLSAI-GYGEYRPVKSNDTEEGRAANRRVDIVILNNE 234 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 28/84 (33%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + N W + Y+D +T+LM F+V++ + D + I F Sbjct: 2 KKKRENKENSERWLLTYSDLITLLMVLFVVLYASSNVDKQKYRQISDSFKQAFSIGDAPG 61 Query: 81 KGIFDEQNPPERSSQNKIDLSIDE 104 + E S N + E Sbjct: 62 AIKEVGEETNENSIVNDAVMVESE 85 >gi|115372712|ref|ZP_01460018.1| hypothetical protein STIAU_6203 [Stigmatella aurantiaca DW4/3-1] gi|115370193|gb|EAU69122.1| hypothetical protein STIAU_6203 [Stigmatella aurantiaca DW4/3-1] Length = 334 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 75/255 (29%), Gaps = 10/255 (3%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 ++ +L D ++VD + YQ + + ++ ++ Sbjct: 52 DKSAFELDSDGDGVPDTVDKCPTEKEDRDGYQDDDGCLDPDNDGDGISDGEDRCPNKPGT 111 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR--KKRLQDLAKKISSTLSGLVADNI 211 + DL+ + + K ++ + Sbjct: 112 VEHRGCPEDLDTDGDGIPDVLDACPDKPGPKEYDGCPDSDGDEVPDNVDDCPDLSGPPEN 171 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIR 269 + I + +F+ + ++ +L ++ VL + + I Sbjct: 172 NGCPYDSPPFVLVESDRIRIKGNILFETGQAKIQKQSFKLLDEVASVLRRNPTLGPVLIE 231 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327 GHTD N LS RA + L G+ R+S GF + +D Sbjct: 232 GHTDNV---GSRNYNVDLSQRRAKAVLDYLAGKGIDRKRLSS-KGFGFDQPIATNDTPLG 287 Query: 328 NSANRRIDILVEDRQ 342 + NRR++ + + Sbjct: 288 RAKNRRVEFRLIKSE 302 >gi|115378003|ref|ZP_01465184.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1] gi|115364980|gb|EAU64034.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1] Length = 636 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 73/257 (28%), Gaps = 23/257 (8%) Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 + +D + ++ + ++ + C ++ Sbjct: 396 DSDGDGILDPDDKCPSVPGVARFQGCPDTDGDGLVDPDDKCPSVPGVERFQGCPDTDGDG 455 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 E D C S + K +L D + Sbjct: 456 IEDASDKCPSVPGIHELKGCPPKDT------------DKDQLPDHRDNCPNEPGPAANQG 503 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISI 268 I I D+ FD + LP + +L ++ ++ E I I Sbjct: 504 CPVQQPQLVEIQRDRIEIKDK---VYFDSDKATILPRSNKLLDQVARIIIEHPELEKIWI 560 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-- 326 GHTD N LS RA L+ GV R+ G+ ++D Sbjct: 561 EGHTDER---GSQDYNRELSQKRAEEVRDYLVTRGVPIGRLVP-KGYGRQYPVASNDTVE 616 Query: 327 MNSANRRIDILVEDRQG 343 +ANRR++ L R+G Sbjct: 617 GRAANRRVEFLTTPREG 633 >gi|326386301|ref|ZP_08207925.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370] gi|326209526|gb|EGD60319.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370] Length = 229 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 8/143 (5%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + L GV ++ G I +++ + FD S++ P L K+ + Sbjct: 78 MDKQIKELKEKTAGSGVDVKSVDDGQAI-LVNLPSGVTFDTDSTVIKPGFRDTLDKVADS 136 Query: 259 LAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L I + GHTD++ N LS +RA L GVS RI +GF Sbjct: 137 LNRYPNSLIDVYGHTDST---GSDAYNQTLSENRARVVADYLSSKGVSSARIRS-TGFGK 192 Query: 318 HRLKIASDP--MNSANRRIDILV 338 + ++D +ANRR++I + Sbjct: 193 TQPVASNDTPEGRAANRRVEIKI 215 >gi|153004433|ref|YP_001378758.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152028006|gb|ABS25774.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5] Length = 498 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 8/113 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSL 289 R F+ S+ PE+ +L ++ +L E+ + GHTD A N LS Sbjct: 390 RGKVQFETGSARLKPESQRLLDQVASILRAHPEIRRVRVEGHTDDV---GPALTNKELSE 446 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA S L++ G++ R+ I G+ R + + NRR++ ++ Sbjct: 447 RRADSVRDALVRRGIAPSRL-SIRGYGESRPIAPNKTKAGRAKNRRVEFVITG 498 >gi|153940806|ref|YP_001391525.1| chemotaxis MotB protein [Clostridium botulinum F str. Langeland] gi|152936702|gb|ABS42200.1| chemotaxis MotB protein [Clostridium botulinum F str. Langeland] gi|295319551|gb|ADF99928.1| chemotaxis MotB protein [Clostridium botulinum F str. 230613] Length = 254 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 11/205 (5%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + K S L++ + + +S ++ +++++ K+ Sbjct: 40 DTAKLQKASQEFNVIFKAGSNVLQEGGSGGASVGKAGISIVPSDSVTEDIKMKEIKSKLE 99 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + V G+ I I D +F+ + L ++ +L +I ++L Sbjct: 100 KEIEK---NGYSDKVKVGVDADGLEIDIQD---VVLFNSGDAEVLKQSSALLTQISKMLK 153 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 I + GHTD P N R NW LS RA + L G+ +++ I + + Sbjct: 154 GLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPANKL-SIQAYGEY 212 Query: 319 RLKIASDPMN--SANRRIDILVEDR 341 K + + NRR++I + + Sbjct: 213 MPKFDNATEAGKAKNRRVEISIVRK 237 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 48/121 (39%), Gaps = 3/121 (2%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W I Y+D +T+L+A F+VM+ ++ D + Q FN Sbjct: 2 KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFN---VIFKAG 58 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S + + + + I + + +T++ +I S +K+ + ++ + Sbjct: 59 SNVLQEGGSGGASVGKAGISIVPSDSVTEDIKMKEIKSKLEKEIEKNGYSDKVKVGVDAD 118 Query: 140 S 140 Sbjct: 119 G 119 >gi|146338211|ref|YP_001203259.1| hypothetical protein BRADO1110 [Bradyrhizobium sp. ORS278] gi|146191017|emb|CAL75022.1| Putative flagellar motor protein MotB [Bradyrhizobium sp. ORS278] Length = 342 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 113/350 (32%), Gaps = 39/350 (11%) Query: 19 KKVAIDDTPNNLGSWKIVYAD-FMTV------LMAFFLVMWIINATDDDTKKAIEQYFNP 71 + D N + D T+ L+ FLV+ + + K + N Sbjct: 5 RSRRGDSGLNYWPG----FVDALSTLVLSIVFLLTVFLVVQFFLSQEVTGKDKALEQLNA 60 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + + + + + D ++ + + + Sbjct: 61 KIAQ-------LNEMLSLEKLGKLSLDDQVAQLRAGLSNAEAERDRIKGLYDGLANAGSN 113 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 ++ + ++ + + ++ ++ L + + + R Sbjct: 114 ATGRANELNRALESEKQVTARALAQIEVLNQQISALRRQLAALEDALDASEKRDKESQNR 173 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSS 242 + DL +++ L+ V + F IL + D R + FD + Sbjct: 174 IADLGSRLNVALAQRVQELTRYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQA 233 Query: 243 IPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAY 293 LPE L + L A + V+ + GHTD P + + NW LS RA Sbjct: 234 TLLPEGQQELNSVATALIDLDKQIPAEISWVLRVDGHTDVRPINSPVFKSNWELSSARAI 293 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 S Q L+ GV R+ GFA + ++ + NRRI++ + +R Sbjct: 294 SVVQYLISLGVPAQRLVAA-GFAEFQPLDTANTDEAFRRNRRIELKLTER 342 >gi|238795648|ref|ZP_04639162.1| hypothetical protein ymoll0001_14990 [Yersinia mollaretii ATCC 43969] gi|238720374|gb|EEQ12176.1| hypothetical protein ymoll0001_14990 [Yersinia mollaretii ATCC 43969] Length = 385 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 3/165 (1%) Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + + RL L +K+ + + +L G+ I IID +N PMF Sbjct: 69 DSEESRREEYRLNKLREKLDQLIESDPRLRALRPHLLINMMEEGLRIQIIDSQNRPMFKM 128 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQ 297 S+ P +L+ I +L IS+ GHTD P+ N NW LS DRA ++ + Sbjct: 129 GSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYANGERGYSNWELSADRANASRR 188 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 L+ G+ E ++ ++ G A + NRRI ILV ++Q Sbjct: 189 ELLIGGLDEGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 233 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 MT +MAFFLVMW+++ + I YF K +T+ +P + Sbjct: 1 MTAMMAFFLVMWLLSVSSPQELTQIADYFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQ 60 Query: 101 SIDEHITKNSVDLKIGS 117 + +S + + Sbjct: 61 VGEVRKHIDSEESRREE 77 >gi|121533592|ref|ZP_01665419.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1] gi|121307583|gb|EAX48498.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1] Length = 257 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 11/160 (6%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 +K L+ + IS + +GV F + G+ I +D +FD + Sbjct: 88 EGTEKDLETFREIISQIQQRVKD---PQGVGFTVSERGLTIRFLDS---ILFDLGRAELR 141 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSG 303 P+ + +L + + L + I + GH D P NW LS R+ + + + K G Sbjct: 142 PDALPLLDAVADALKQTDNYIRVEGHADNLPINTAQFPSNWELSAARSIAVTRYFIDKHG 201 Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 + R+S + G+ +R + + NRR+DI++ Sbjct: 202 LEPRRLSSL-GYGEYRPLYPNTSEANRAKNRRVDIVILRS 240 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 2/100 (2%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 + W + YAD +T+LM FF+VM+ +++ D A++ + + IF Sbjct: 14 HDATGMMRWLLTYADLITLLMVFFVVMYAMSSADQKKFNALKASLAAALRTEGAGTNLIF 73 Query: 85 DEQN--PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + P + + E + ++ + + Sbjct: 74 EYSGNRPFNQVVNPEGTEKDLETFREIISQIQQRVKDPQG 113 >gi|293607844|ref|ZP_06690158.1| chemotaxis protein MotB [Achromobacter piechaudii ATCC 43553] gi|292813756|gb|EFF72923.1| chemotaxis protein MotB [Achromobacter piechaudii ATCC 43553] Length = 340 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 3/201 (1%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 S + ++ + + + + + RL++L K++ + Sbjct: 83 GGPSSSAETSAVPGGGRDPLRSEGDVRRGQGNRVESQPMGDAERREQHRLENLKKRLENV 142 Query: 203 LS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + V + +L + T G+ I IID +N PMF + P +L+++G VL Sbjct: 143 IETSPVLKSFRPQMLIDLTTEGLRIQIIDNQNRPMFATGRAEVQPYMRDILRELGPVLNE 202 Query: 262 STEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 +SI GHTDAS + A NW LS DRA ++ Q L+ G++E ++ +I G + Sbjct: 203 LPNKVSISGHTDASQYARGERAYSNWELSADRANASRQELVAGGMNESKVMRIQGLSSSM 262 Query: 320 LKIASDPMNSANRRIDILVED 340 + DP + NRRI ++V + Sbjct: 263 SLVKDDPYAAVNRRISLVVLN 283 >gi|251777807|ref|ZP_04820727.1| putative chemotaxis MotB protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082122|gb|EES48012.1| putative chemotaxis MotB protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 244 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 11/164 (6%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 M ++L K+ + N+ V + G++IS D F+ + Sbjct: 78 DAVMGESEKLDTAKSKVDELIKEY---NLEGSVSTQIQERGLIISFNDN---VFFNSGDA 131 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 E L I ++L + I + G+TD NW+LS RA + ++L+K Sbjct: 132 TIKNEYKQKLISISKILNNIDNYIRVEGNTDNVAINTENFHSNWQLSAIRAANVVELLVK 191 Query: 302 SG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 G +S D++S I G+ +R ++D +ANRR+DI++ + + Sbjct: 192 EGNISSDKLSAI-GYGEYRPVKSNDTEDGRAANRRVDIVILNNE 234 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 2/97 (2%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 ++ N W + Y+D +T+LM F+V++ + D K I F + + Sbjct: 2 RKKRESKENSERWLLTYSDLITLLMVLFVVLYASSNVDKQKYKQISNSFKQAFS--IGDA 59 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 G +E + D + E ++ K+ Sbjct: 60 PGAINETGEETNENSIVNDAVMGESEKLDTAKSKVDE 96 >gi|294635726|ref|ZP_06714192.1| chemotaxis MotB protein [Edwardsiella tarda ATCC 23685] gi|291090938|gb|EFE23499.1| chemotaxis MotB protein [Edwardsiella tarda ATCC 23685] Length = 332 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 R S+ + D + E F E+ + R KRL++ +K+ ++ Sbjct: 72 QGGQRSSDSFSPIPGGGDDVTQKSGEVQRFAADPDPEQRVEQMRLKRLRERLEKV--IIN 129 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 + ++ G+ I IID +N PMF S+ P +L+ I +L Sbjct: 130 DPRLKALRPHLMINMMDEGLRIQIIDSQNRPMFQNGSARVEPYMRDILRAIAPILNELPN 189 Query: 265 VISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH---R 319 IS+ GHTD P+ N NW LS DRA ++ + L+ G++ ++I ++ G A R Sbjct: 190 KISLSGHTDDLPYANGERGYSNWELSADRANASRRELVIGGLAGNKILRVVGMADTMNLR 249 Query: 320 LKIASDPMNSANRRIDILVEDR 341 + + NRRI ILV + Sbjct: 250 HLAGN---AAVNRRISILVLTK 268 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 70/178 (39%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 I++KKK + ++ G+WKI YADFMT +MAFFLVMW++ I +YF Sbjct: 4 GKHPVILVKKKRSGHGQASHGGAWKIAYADFMTAMMAFFLVMWLLAIASPQELTRIAEYF 63 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 K + + D +P + S + D + + + R Sbjct: 64 RTPLKVALQGGQRSSDSFSPIPGGGDDVTQKSGEVQRFAADPDPEQRVEQMRLKRLRERL 123 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 +++ + + + ++G + + + + + + P ++ + A+ Sbjct: 124 EKVIINDPRLKALRPHLMINMMDEGLRIQIIDSQNRPMFQNGSARVEPYMRDILRAIA 181 >gi|146337865|ref|YP_001202913.1| hypothetical protein BRADO0750 [Bradyrhizobium sp. ORS278] gi|146190671|emb|CAL74675.1| hypothetical protein; putative Outer membrane protein containing OmpA/MotB domain [Bradyrhizobium sp. ORS278] Length = 429 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 78/270 (28%), Gaps = 12/270 (4%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + + PP + D ++ + G Sbjct: 159 VIESGEAAPALTLAPPAAKPEKVADKDDLPYLKPYPGSSRKGEGRGNGPLDVTRPGSGDE 218 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 S + K + P KE A Sbjct: 219 PALVGQGVVVRSYQGPTTLSKLQFVAEYRAALSKAGWQVTYPATDKEAADAAVVIAHYTR 278 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FDKSSSIPLPETIV 250 + I + L+ N+ V + + + + P+ FD + + PE+ Sbjct: 279 DGRDIWARLTYEFGANLSVSV-VDLGAEDLAGKLDKDCHLPLYGVLFDFNKASLKPESEP 337 Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L K+ ++ + I GHTD N RLS RA S L + GV+ R+ Sbjct: 338 LLTKVAALVTARPDLNAEIEGHTDNV---GGDDYNMRLSDARAASVRTWLTQHGVAAARL 394 Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDIL 337 + G+ R + + NRR++I+ Sbjct: 395 TS-HGYGKTRPVADNGTDQGRALNRRVEIV 423 >gi|168179911|ref|ZP_02614575.1| chemotaxis MotB protein [Clostridium botulinum NCTC 2916] gi|182669337|gb|EDT81313.1| chemotaxis MotB protein [Clostridium botulinum NCTC 2916] Length = 254 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 11/205 (5%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + K S L++ + + +S ++ +++++ K+ Sbjct: 40 DTAKLQKASQEFNVIFKAGSNVLQEGGSGGASVGKAGVSIVPSDSVIEDIKMKEIKSKLE 99 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + V G+ I I D +F+ + L ++ +L +I ++L Sbjct: 100 KEIKK---NGYSDKVKVGVDADGLEIDIQD---VVLFNSGDAEVLKQSSALLTQISKMLK 153 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 I + GHTD P N R NW LS RA + L G+ +++ I + + Sbjct: 154 GLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPANKL-SIQAYGEY 212 Query: 319 RLKIASDPM--NSANRRIDILVEDR 341 K + + NRR++I + + Sbjct: 213 MPKFDNATEAGRAKNRRVEISIVRK 237 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 5/125 (4%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN---- 75 K + +W I Y+D +T+L+A F+VM+ ++ D + Q FN K Sbjct: 2 KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNVIFKAGSNV 61 Query: 76 -LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 S G + + + I K+ ++ +I + + + Sbjct: 62 LQEGGSGGASVGKAGVSIVPSDSVIEDIKMKEIKSKLEKEIKKNGYSDKVKVGVDADGLE 121 Query: 135 SNSQQ 139 + Q Sbjct: 122 IDIQD 126 >gi|322806477|emb|CBZ04046.1| flagellar motor rotation protein MotB [Clostridium botulinum H04402 065] Length = 254 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 78/205 (38%), Gaps = 11/205 (5%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + K S L++ + ++ +S ++ +++++ K+ Sbjct: 40 DTAKLQKASQEFNVIFKAGSNVLQEGGSGGDSVGKAGVSIVPSDSVIEDIKMKEIKSKLE 99 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + V G+ I I D +F+ + L ++ +L +I ++L Sbjct: 100 KEIKK---NGYSDKVKVGVDADGLEIDIQD---VVLFNSGDAEVLKQSSALLTQISKMLK 153 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 I + GHTD P N R NW LS RA + L G+ +++ I + + Sbjct: 154 GLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPANKL-SIQAYGEY 212 Query: 319 RLKIASDPM--NSANRRIDILVEDR 341 K + + NRR++I + + Sbjct: 213 MPKFDNATEAGRAKNRRVEISIVRK 237 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 48/121 (39%), Gaps = 3/121 (2%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W I Y+D +T+L+A F+VM+ ++ D + Q FN Sbjct: 2 KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFN---VIFKAG 58 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S + + + + + + + + + ++ +I S +K+ + ++ + Sbjct: 59 SNVLQEGGSGGDSVGKAGVSIVPSDSVIEDIKMKEIKSKLEKEIKKNGYSDKVKVGVDAD 118 Query: 140 S 140 Sbjct: 119 G 119 >gi|167574625|ref|ZP_02367499.1| Chemotaxis lafU protein [Burkholderia oklahomensis C6786] Length = 303 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 85/220 (38%), Gaps = 4/220 (1%) Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 L + ++ + + E G + + + + + + Sbjct: 47 LWVMNVTPEDERRRVAAEIAGKPIFEGGVGIFEQRSRKLVLVPHDELPRGRAPEPADAKE 106 Query: 187 KRK--KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + L+ K + + A + V G+ ++I D MF + S + Sbjct: 107 RDDTIDTLEARRKLAARIRAEANALGMDGNVDVAINDDGVRVTIHDSSEKGMFARRSDVL 166 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKS 302 + +L+ + VL+ T + I GHTDA+ + +NW LS RA A Q L+ Sbjct: 167 DLQFDALLKALAPVLSSVTNKLVIVGHTDATQYAGASVFSNNWSLSSRRALRARQALIDG 226 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 G+ E ++ ++SG + DP + NRR+++L+ Q Sbjct: 227 GLGEPQLFQVSGMGDSIPAVPDDPRHDVNRRVELLLLTSQ 266 >gi|330991015|ref|ZP_08314969.1| hypothetical protein SXCC_00923 [Gluconacetobacter sp. SXCC-1] gi|329761836|gb|EGG78326.1| hypothetical protein SXCC_00923 [Gluconacetobacter sp. SXCC-1] Length = 320 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 101/329 (30%), Gaps = 42/329 (12%) Query: 32 SWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 +W Y D T+LM F++ + + ++ L Sbjct: 15 AWPG-YVDALSTLLMVIIFVLLVFVLGQAFLSVALNKRQQALNQLEHEVARL-------- 65 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 + EH ++ ++ S ++ +QQ+ Sbjct: 66 -------------GQMLSLEHSHTTALQNEVASLHKAHDADVATATSLTAQLNQQTSERD 112 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 ++ R + + + + +++ + +L K L Sbjct: 113 SAQARTTALDEQVAQLNAQLAALSTVLEATEDTVHDRDRQISNLGMQLNVALAKKVEQLQ 172 Query: 205 GLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-- 260 ++ + G+ I ++ +F + PE + ++ + + L Sbjct: 173 QYRSEFFGRLRSVMQDHKGVQIVGDRFVFQSEVLFPPGGADLSPEGVQEIRVLAKTLRQV 232 Query: 261 ------HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++ + GH D P + NW LS RA + ++L+ G+ + +G Sbjct: 233 AQQIPADVPWILRVDGHADRQPIHSAFPSNWELSSARAITVVKLLIAEGIDPHHL-AATG 291 Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341 F+ ++ + NRRI+ + DR Sbjct: 292 FSDYQPLDKGTTPEAFARNRRIEFRLTDR 320 >gi|319778561|ref|YP_004129474.1| OmpA/MotB domain protein [Taylorella equigenitalis MCE9] gi|317108585|gb|ADU91331.1| OmpA/MotB domain protein [Taylorella equigenitalis MCE9] Length = 959 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 85/292 (29%), Gaps = 31/292 (10%) Query: 54 INATDDDTKKAIEQYFNPFGK---NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110 ++A D A ++ + + + + D + Sbjct: 571 VSAEDKTKLLAAFDSIKDTSTIQDDMDVKDNQANMKLDSLDAFIKVVGDFPNVKGSFDGF 630 Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 G ++ L + SQ + + G+ K D Sbjct: 631 TLDLTGHVISDERKTELVTKLQEALGSQFKIDADDVDVETPDVGETENKPVDDTNFPTPA 690 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 E E+ + +LA + +S + +N+ ++ Sbjct: 691 EQPADQTAPAEQATTSSETAQTDELANVLD--ISEMSKENLDLHIV-------------- 734 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 FD +SS P+ L + L S I G+TD N +LS + Sbjct: 735 ------FDSASSDIQPKYNDRLDAFAKYLIESNRTGEISGYTDNQ---GDDESNKKLSAE 785 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 RA S L+ GV E I + G+ ++ NRRI+ V+D Sbjct: 786 RANSVRNYLVSKGVPETNIVAV-GYGEANPIADNNTPEGRLANRRIEFNVKD 836 >gi|149375611|ref|ZP_01893380.1| Flagellar motor protein [Marinobacter algicola DG893] gi|149360013|gb|EDM48468.1| Flagellar motor protein [Marinobacter algicola DG893] Length = 277 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 73/200 (36%), Gaps = 8/200 (4%) Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 L +S + E P E+ A K + S + L Sbjct: 66 GDAVGGSPLTLIESDTVSLPEPMETAADEPEFIDERAEADAPTKIPAGVIDLASRMIQEL 125 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 + + + + ++I ++ F + P + +++++ EVL+ T + Sbjct: 126 EPEVASEALSVNYDESRVVIRFSEEAT---FRSGEAAIKPGMVPIIERVVEVLSGCTGDV 182 Query: 267 SIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS 324 + G+TD P R NW LS RA S L+ V +R+ G A + + Sbjct: 183 LVAGYTDDRPIASGRYRSNWDLSAARAVSVVHELVMNRQVPAERVVAA-GRAETNPLVPN 241 Query: 325 DP--MNSANRRIDILVEDRQ 342 D + NRR++I + + Q Sbjct: 242 DSPENRAKNRRVEIAIRNPQ 261 Score = 44.6 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 15/151 (9%), Positives = 43/151 (28%), Gaps = 5/151 (3%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 ++++ V +W + +AD T+L+ FF+++ D + +A+ + Sbjct: 2 VVRQPVKKKKHGRGSPAWIVTFADLATLLLTFFILLLSFAEMDVEKYRAMANSMAVAFGS 61 Query: 76 LM-----TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + ++ + + + + + Sbjct: 62 NQVLGDAVGGSPLTLIESDTVSLPEPMETAADEPEFIDERAEADAPTKIPAGVIDLASRM 121 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161 I L SE + + ++T Sbjct: 122 IQELEPEVASEALSVNYDESRVVIRFSEEAT 152 >gi|116878566|ref|YP_357384.2| chemotaxis protein MotB [Pelobacter carbinolicus DSM 2380] gi|114843202|gb|ABA89214.2| chemotaxis protein MotB [Pelobacter carbinolicus DSM 2380] Length = 299 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 91/213 (42%), Gaps = 12/213 (5%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +++ + + + T+L + I++ + S+ + + R+ R+ L Sbjct: 86 AKADIARLEKILANRSAETGQAMTELRQDIDRLQEEKRHLNSQLEQEHLARQARIAQLKT 145 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L ++ V + + ++++++ +FD + P + +L++IG Sbjct: 146 TYDDLVDKLESEIKRGEVTISDLQGRLTVNMVEK---ILFDSGKADIKPAGLNILKRIGT 202 Query: 258 VLAHSTEV-ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311 +L ++ + I + GHTD P R NW LS RA S L G+S +R+ Sbjct: 203 ILKNTADKSIRVEGHTDNVPISPRLKDIYRSNWELSTARAGSVVHFLQDRLGISGERL-S 261 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + GF + ++ + NRRI I++ +Q Sbjct: 262 VCGFGPYMPIASNATAQGRAQNRRIQIVLVPQQ 294 >gi|51894108|ref|YP_076799.1| flagellar motor protein MotB [Symbiobacterium thermophilum IAM 14863] gi|51857797|dbj|BAD41955.1| flagellar motor protein MotB [Symbiobacterium thermophilum IAM 14863] Length = 300 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 90/311 (28%), Gaps = 38/311 (12%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 W + YADFMT++ F+VM+ D +++ + Q Sbjct: 25 RWMVSYADFMTLMFIVFVVMFSFARVDTAKYQSLARSL----------------GQALGT 68 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 + + T + + + I + Sbjct: 69 VGPDIAPLPTRGQEGTALPIIWPERPGSLPDVPDWPAHLIAPPEEEPTESAPVPPVEPPP 128 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + + + TD+ + P S + + ++A+ + Sbjct: 129 AEAEPADEPTDVWTVLEP--EPAPVPASPRVTAPVAEPDEMAEVAEVFRAM-----PGVK 181 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 + GI++S+ + +F+ PE L +I + LA I + G Sbjct: 182 TGLLSVALEERGIVLSV---AGSLLFEPGEYTIRPEAYPTLNEIADKLAGVELPIMVNGT 238 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA 330 DAS A + L+ RA + + + G+ G+ + Sbjct: 239 ADASHAAGSAEA-FELAALRAGAVVRYFTETYGLPGGNFVYF-GYGDGQSASD------- 289 Query: 331 NRRIDILVEDR 341 R+ I+V + Sbjct: 290 --RVTIVVARK 298 >gi|313682225|ref|YP_004059963.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994] gi|313155085|gb|ADR33763.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994] Length = 283 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 85/248 (34%), Gaps = 8/248 (3%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 S + ++ E S T +++ Q N +++ K + Sbjct: 21 SSKTHEATLQELENTRSALASAQRTVNEQKLQIKRNQEEIERYNKEINELKTKKQELEAE 80 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 + L S + + E+ L K+ + + Q + + + L Sbjct: 81 YQKLQASLNTTRMELAEKQSMLNLTEKQLKTLRQIEAETQKRNEIYARFVGKLQKMIDAG 140 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272 + ++I++ + +F + L++I +VL E I GHT Sbjct: 141 KLTVSIENGRLVINLPEN---VLFPTGRTTLNAGGSETLKEIADVLKELPERRFQIEGHT 197 Query: 273 DASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 D P N NW LS RA +++ GV IS G+ + + ++ Sbjct: 198 DTVPIHNDRFASNWELSSGRALRVVHLMIDEGVQPANISAA-GYGEFQPRADNNTTEGKA 256 Query: 331 -NRRIDIL 337 NRRI+I+ Sbjct: 257 LNRRIEIV 264 >gi|300113742|ref|YP_003760317.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113] gi|299539679|gb|ADJ27996.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113] Length = 286 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 85/250 (34%), Gaps = 10/250 (4%) Query: 96 NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS--EHCKNSLTRDSEK 153 I + E + + S + RL+ L +Q + Sbjct: 30 PPIKPAKLERAEADVEQAQADSRVTQYAPVRLDEAKEALQRAQVAWEADKNVEEVEHLAY 89 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 + + +K + L +E+ + L+ K + ++ + AD + K Sbjct: 90 LAQQRAAIAEMAAADKAAQAEIKNLGQERQQMLMDMHELEARQAKEQAKMAEVRADKLEK 149 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272 + ++ +F+ S+ + L ++ L + + GHT Sbjct: 150 RLAALNAEKTERGYVL-TLGDILFEVDSAELTSGGMQNLFRLVTFLKEYPDRQVVIEGHT 208 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330 D++ N LS RA + Y+ L+ +G+S RI G+ ++ Sbjct: 209 DST---GSGVYNMELSQRRADAVYEFLVNNGISPARI-AAHGYGKAYPVAPNNTAAGRQK 264 Query: 331 NRRIDILVED 340 NRR++I++ D Sbjct: 265 NRRVEIVILD 274 >gi|238785460|ref|ZP_04629444.1| hypothetical protein yberc0001_17840 [Yersinia bercovieri ATCC 43970] gi|238713615|gb|EEQ05643.1| hypothetical protein yberc0001_17840 [Yersinia bercovieri ATCC 43970] Length = 380 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 3/165 (1%) Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + K + RL L +K+ + + +L G+ I IID +N PMF Sbjct: 69 DSEESRKEEYRLNKLREKLDQLIESDPRLRALRPHLLINMMEEGLRIQIIDSQNRPMFKM 128 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQ 297 S+ P +L+ I +L IS+ GHTD P+ N NW LS DRA ++ + Sbjct: 129 GSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYANGERGYSNWELSADRANASRR 188 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 L+ G+ E ++ ++ G A + NRRI ILV ++Q Sbjct: 189 ELLIGGLDEGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 233 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 MT +MAFFLVMW+++ + I YF K +T+ +P + Sbjct: 1 MTAMMAFFLVMWLLSVSSPQQLTQIADYFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQ 60 Query: 101 SIDEHITKNSVDLKIGS 117 + +S + + Sbjct: 61 VGEVRKHIDSEESRKEE 77 >gi|218662295|ref|ZP_03518225.1| hypothetical protein RetlI_23953 [Rhizobium etli IE4771] Length = 223 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 74/219 (33%), Gaps = 15/219 (6%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 +Q + + +L++ + + ++ + RL Sbjct: 6 DEQKQVSERALSQVELLNQQIAALRSQIAAVEAALQASEEKDRVSQTKIADLGSRLNVAL 65 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L+ +D + + R I I ++ +F + PE + K Sbjct: 66 AARVQELNRYRSDFFGRLREILSDRENIRIVGDRFVFQSEVLFPSGGADLNPEGQTEMAK 125 Query: 255 IGEVL--------AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGV 304 + L V+ + GHTD P RDNW LS RA S + L+ GV Sbjct: 126 LATALLDLAKEIPPEINWVLRVDGHTDNVPLGGTGRYRDNWELSSARATSVVKFLIGQGV 185 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 DR+ GF + D + NRRI++ + ++ Sbjct: 186 PADRLVAA-GFGEFQPIAPGDTPEARATNRRIELKLTEK 223 >gi|330721195|gb|EGG99305.1| Flagellar motor rotation protein MotB [gamma proteobacterium IMCC2047] Length = 307 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 10/153 (6%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L +L+ ++ S LV D + + T I IS+ + +F+ S+ +++ V Sbjct: 110 LSELSDQVESAFGDLVRDG---EITISGSETWIEISL---SSGLLFNSGSANLNRQSLPV 163 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L++I +L+ + + G TD P I NW LS R+ + ++L +SGV +R++ Sbjct: 164 LEEISSILSGYENPVHVEGFTDDIPIQSGIFPSNWELSAARSAAVVRLLSESGVEPNRLA 223 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + G+ + +++ NRR+ ++V Sbjct: 224 AV-GYGQFQPIASNESAEGRGKNRRVALIVSRD 255 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 3/139 (2%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 ++ N W I Y+DFMT+L AFF+VM+ I++ ++ K + + + Sbjct: 3 RRDKHTSHDQENHERWLISYSDFMTLLFAFFVVMYSISSVNEGKYKVLSETLIDAFQVED 62 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + + + + + ID + D+K T L + + S Sbjct: 63 KEEESSSELIELSDHNKNSMIDFDGRAN---KEGDVKAEVTGDGDYIGTLLSELSDQVES 119 Query: 138 QQSEHCKNSLTRDSEKGKD 156 + ++ S Sbjct: 120 AFGDLVRDGEITISGSETW 138 >gi|188587883|ref|YP_001922642.1| chemotaxis MotB protein [Clostridium botulinum E3 str. Alaska E43] gi|188498164|gb|ACD51300.1| putative chemotaxis MotB protein [Clostridium botulinum E3 str. Alaska E43] Length = 244 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 11/164 (6%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 M ++L K+ + N+ V + G++IS D F+ + Sbjct: 78 DAVMGESEKLDTAKSKVDELIKEY---NLEGSVSTQIQERGLIISFNDN---VFFNSGDA 131 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 E L I ++L + I + G+TD NW+LS RA + ++L+K Sbjct: 132 TIKNEYKQKLISISKILNNIDNYIRVEGNTDNVAINTENFHSNWQLSAIRAANVVELLVK 191 Query: 302 SG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 G +S D++S I G+ +R ++D +ANRR+DI++ + + Sbjct: 192 EGNISSDKLSAI-GYGEYRPVKSNDTEDGRAANRRVDIVILNNE 234 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 23/54 (42%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 ++ N W + Y+D +T+LM F+V++ + D K I F Sbjct: 2 RKKRESKENSERWLLTYSDLITLLMVLFVVLYASSNVDKQKYKQISNSFKQAFS 55 >gi|326791532|ref|YP_004309353.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427] gi|326542296|gb|ADZ84155.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427] Length = 248 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 65/184 (35%), Gaps = 14/184 (7%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 D N + + A + + + I + + D+ + + + Sbjct: 67 DNNVLENGMSQFPVKETQFSIEQAYQEAQETTKAEQDIKAYVKAKEIDD---KITVQKSG 123 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFR 278 I+I D +FD + P I L IGE L + + + GHTD P Sbjct: 124 DMIVIRFAD---ILLFDTGKADIKPGAIPNLNLIGEKLREYIDQGYHLRVEGHTDNQPIH 180 Query: 279 NIAR-DNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334 NW LS RA + + L + + +IS G + ++ + NRR+ Sbjct: 181 TAQFPSNWELSSARAIAVMRFYLEEMDFNPSKISA-EGMGEYHPISSNATSEERAQNRRV 239 Query: 335 DILV 338 +I + Sbjct: 240 EIKL 243 >gi|212638649|ref|YP_002315169.1| flagellar motor protein MotB [Anoxybacillus flavithermus WK1] gi|212560129|gb|ACJ33184.1| Flagellar motor protein B [Anoxybacillus flavithermus WK1] Length = 251 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 7/158 (4%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 K+ ++L K S + + + + T G+L++I N +FD S+ P+ Sbjct: 94 KEEYEELKKIQSKFNEYVKTNQLSGELSVAMTEEGLLVTI---ANDVLFDSGSADIKPQY 150 Query: 249 IVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSE 306 V +KI +L + I I GHTD P N NW LS+ RA + ++L+++ + Sbjct: 151 RNVAKKISNLLVMNPPRNIVISGHTDNVPINNAKFASNWELSVMRAVNFMKLLLENTKLD 210 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 ++ G+ + ++ + NRR++IL+ ++ Sbjct: 211 PQLFSAKGYGEFKPIASNATPEGRAKNRRVEILIMPQE 248 >gi|157371226|ref|YP_001479215.1| OmpA/MotB domain-containing protein [Serratia proteamaculans 568] gi|157322990|gb|ABV42087.1| OmpA/MotB domain protein [Serratia proteamaculans 568] Length = 321 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 3/180 (1%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224 + + L + + + RL L +K+ + + +L G+ Sbjct: 86 GDDPTQQDGLVKRQIDTLEKRDEELRLNKLREKLDELIESDPRLKALRPHLLINMMDEGL 145 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282 I IID +N PMF S+ +L+ I +L IS+ GHTD P+ Sbjct: 146 RIQIIDSQNRPMFKTGSAQVESYMRDILRAIAPILNDLPNKISLSGHTDDIPYATGERGY 205 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 NW LS DRA ++ + L+ G+SE ++ ++ G A ++ NRRI +LV ++Q Sbjct: 206 SNWELSADRANASRRELIAGGLSEGKVLRVVGMAATMSLKQHGADDAINRRITVLVLNKQ 265 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 47/107 (43%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +++ +K ++ GSWKI YADFMT +MAFFLVMW++ I +YF Sbjct: 3 QNHPVVLVRKRKSHQAGHHGGSWKIAYADFMTAMMAFFLVMWLLAIASPQELTQIAEYFR 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 K +T+ E +P + ++++ + Sbjct: 63 TPLKVALTSGDKSSSESSPIPGGGDDPTQQDGLVKRQIDTLEKRDEE 109 >gi|302874600|ref|YP_003843233.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans 743B] gi|307690789|ref|ZP_07633235.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans 743B] gi|302577457|gb|ADL51469.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B] Length = 236 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 6/197 (3%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 N T+ E+ + + N P + +K + S Sbjct: 37 SNVDTQKFEQISVALNNMFTKNPAESLLNDKNPEGEVPIVGEETPQKDAEKSVDLYSQIQ 96 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + + V GI I + ++ +FD + + L KI E++A Sbjct: 97 QLIDKNTLQGQVKLTKDERGINIELNEK---ILFDSGKAEIKTDFATTLNKISEIIASIG 153 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 +I I GHTD P + ++N LS RA S + G+S++R+ + Sbjct: 154 NLIEIEGHTDNVPISGVYKNNRDLSYARANSVLEYFASRGISQNRMVT-KAYGEWYPIKP 212 Query: 324 SDP--MNSANRRIDILV 338 +D + NRR++IL+ Sbjct: 213 NDSDANRAENRRVNILI 229 >gi|148380179|ref|YP_001254720.1| chemotaxis MotB protein [Clostridium botulinum A str. ATCC 3502] gi|153932823|ref|YP_001384478.1| chemotaxis MotB protein [Clostridium botulinum A str. ATCC 19397] gi|153937092|ref|YP_001387994.1| chemotaxis MotB protein [Clostridium botulinum A str. Hall] gi|148289663|emb|CAL83767.1| putative chemotaxis MotB protein [Clostridium botulinum A str. ATCC 3502] gi|152928867|gb|ABS34367.1| putative chemotaxis MotB protein [Clostridium botulinum A str. ATCC 19397] gi|152933006|gb|ABS38505.1| putative chemotaxis MotB protein [Clostridium botulinum A str. Hall] Length = 254 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 11/205 (5%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + K S L++ + + +S ++ +++++ K+ Sbjct: 40 DTAKLQKASQEFNVIFKAGSNVLQEGGSGGASVGKAGVSIVPSDSVTEDIKMKEIKSKLE 99 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + V G+ I I D +F+ + L ++ +L +I ++L Sbjct: 100 KEIKK---NGYSDKVKVGVDADGLEIDIQD---VVLFNSGDAEVLKQSSALLTQISKMLK 153 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 I + GHTD P N R NW LS RA + L G+ +++ I + + Sbjct: 154 GLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPANKL-SIQAYGEY 212 Query: 319 RLKIASDPM--NSANRRIDILVEDR 341 K + + NRR++I + + Sbjct: 213 MPKFDNVTEAGRAKNRRVEISIVRK 237 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 48/121 (39%), Gaps = 3/121 (2%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W I Y+D +T+L+A F+VM+ ++ D + Q FN Sbjct: 2 KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFN---VIFKAG 58 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S + + + + + + + +T++ +I S +K+ + ++ + Sbjct: 59 SNVLQEGGSGGASVGKAGVSIVPSDSVTEDIKMKEIKSKLEKEIKKNGYSDKVKVGVDAD 118 Query: 140 S 140 Sbjct: 119 G 119 >gi|167567201|ref|ZP_02360117.1| Chemotaxis lafU protein [Burkholderia oklahomensis EO147] Length = 303 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 5/208 (2%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + + K + P +KE+ + + + LA Sbjct: 62 AAEIAGQPIFEGGVGIFEQRSRKLVLVPHDELPRGRAPEPADAKERDDTIDTLEARRKLA 121 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 +I + + L D V G+ ++I D MF + S + + +L+ + Sbjct: 122 ARIRAEANALGMDG---NVDVAINDDGVRVTIHDSSEKGMFARRSDVLDLQFDALLKALA 178 Query: 257 EVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 VL+ T + I GHTDA+ + +NW LS RA A Q L+ G+ E ++ ++SG Sbjct: 179 PVLSSVTNKLVIVGHTDATQYAGASVFSNNWSLSSRRALRARQALIDGGLGEPQLFQVSG 238 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 + DP + NRR+++L+ Q Sbjct: 239 MGDSIPAVPDDPRHDVNRRVELLLLTSQ 266 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 70/187 (37%), Gaps = 11/187 (5%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 MN + D IIK+ + G+WK+ +ADF LMA F+V+W++N T +D Sbjct: 1 MNPNRDAGHG---PTIIKRAGRHHEEGG-GGAWKVAFADFTLALMALFMVLWVMNVTPED 56 Query: 61 TKKAIEQYF-------NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 ++ + G + K + + R + + + T ++++ Sbjct: 57 ERRRVAAEIAGQPIFEGGVGIFEQRSRKLVLVPHDELPRGRAPEPADAKERDDTIDTLEA 116 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + + + + + + + ++ SEKG +S L+ + Sbjct: 117 RRKLAARIRAEANALGMDGNVDVAINDDGVRVTIHDSSEKGMFARRSDVLDLQFDALLKA 176 Query: 174 FLPPLSK 180 P LS Sbjct: 177 LAPVLSS 183 >gi|90021803|ref|YP_527630.1| Fis family transcriptional regulator [Saccharophagus degradans 2-40] gi|89951403|gb|ABD81418.1| OmpA/MotB [Saccharophagus degradans 2-40] Length = 288 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 10/160 (6%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 L+ + +++ LSG++ V + + I I F + P Sbjct: 73 EAEVAPLKQIEQQLEQALSGVL---ATGEVTLNGNQNWVEIVIDAN---SFFSSGQATPS 126 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGV 304 E VL K+ ++++ +++ GHTD +P N +NW LS RA + +L +GV Sbjct: 127 DEARTVLNKVADIISPFDNAVAVGGHTDDTPINNAQFKNNWELSSARAVTVVNLLAFAGV 186 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S +R+S + G+ +R + NRR+ + V + Sbjct: 187 SPERMSAV-GYGEYRPIADNQTPEGRSANRRVVLRVARDR 225 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 48/133 (36%), Gaps = 2/133 (1%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 +I+++ + W + YADF+T+L AFF+VM+ ++ ++ + + + + Sbjct: 1 MIRRQPIETKINH--ERWLVSYADFITLLFAFFVVMYSVSQVNETKYRTLSETLGNAFSS 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + + K E + + N + + + + Sbjct: 59 SAKKTNKNRSPDTTEAEVAPLKQIEQQLEQALSGVLATGEVTLNGNQNWVEIVIDANSFF 118 Query: 136 NSQQSEHCKNSLT 148 +S Q+ + T Sbjct: 119 SSGQATPSDEART 131 >gi|220935190|ref|YP_002514089.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996500|gb|ACL73102.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] Length = 252 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 10/176 (5%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 E ++ + ++ + L+ ++GV TT + + Sbjct: 80 PPLFEEAPATYPGEQPLAEPLAREEAPAAESALEQALA---RQGGLEGVEVFTTPGQVEL 136 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNW 285 I + +F S+ + +L + VL + I++ GHTD P NW Sbjct: 137 RIKE---GILFASGSAELRSDGRALLSSLMPVLNAAEGQITVEGHTDNVPIFTPIFPSNW 193 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 LS RA + L+ G++ +R+ + GFA R +D + NRR+ ++++ Sbjct: 194 ELSAARASGVVRQLIALGLAPERLQAV-GFADTRPVAGNDTAEGRAENRRVSLVIQ 248 >gi|256820114|ref|YP_003141393.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256581697|gb|ACU92832.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271] Length = 456 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 84/274 (30%), Gaps = 16/274 (5%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + + GI + +R D +LK ++ Sbjct: 183 DYFQHAAGITIKFGKKDRDKDGVADKDDLCPDEPGKPELKGCPDRDNDGVADKDDACPDE 242 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + + + C + D C N + + ++ Sbjct: 243 AGKPELKGCPDRDNDGIADKDDACPDEAGPAEFNGCPDTDGDGVPDNVDQCKDVAGPKEN 302 Query: 195 LAKKISSTLSGLVADNIVKGVLFE---------TTRTGILISIIDQRNTPMFDKSSSIPL 245 T V D + V + + D T +FD + + Sbjct: 303 NGCPWPDTDGDGVLDKDDECVDVPGPASNNGCPEVTEEVQKKLNDFARTILFDVNKATIR 362 Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P++ VL +I +VL SI G+TD N +LS +RAYS L++ G+ Sbjct: 363 PQSATVLNQIVDVLNQYKNAKFSIEGYTD---ISGKRDKNQKLSENRAYSVKAYLIEKGI 419 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 E R++ GF + ++ NRR++I Sbjct: 420 DEGRLTA-KGFGPDKPIASNKTKKGRELNRRVEI 452 >gi|158320524|ref|YP_001513031.1| OmpA/MotB domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158140723|gb|ABW19035.1| OmpA/MotB domain protein [Alkaliphilus oremlandii OhILAs] Length = 254 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 85/246 (34%), Gaps = 12/246 (4%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 + T L L E K S + S+ + Sbjct: 6 QQEDQPAGAPLWMTTYSDMVTLLLCFFVLLFAFSTVETQKFDQLMQSLQNAIGVSSSGIL 65 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 N S L ++ L++ + + S L ++ VL G+ Sbjct: 66 DGGNTLFPNDFIDQSLMGDLTAGQRNELENFRELQETLESYLQEYDLETEVLVSQESRGL 125 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFR--N 279 ++ D +FD + P + +LQ I E L + I + GHTD + Sbjct: 126 MLRFQDN---VLFDPGKAELKPRSKEILQDIAEFLRSPELKDKDIRVEGHTDTVKVNPTS 182 Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 I NW LS RA + + ++ + +R I+G+ ++ +D + S NRR+DI Sbjct: 183 IYPTNWELSTGRASNVVRYFIEEIDMDPERF-SIAGYGEYQPIAPNDTVENKSKNRRVDI 241 Query: 337 LVEDRQ 342 ++ + Sbjct: 242 VILRSE 247 >gi|23099679|ref|NP_693145.1| flagellar motor protein MotS [Oceanobacillus iheyensis HTE831] gi|22777909|dbj|BAC14180.1| flagellar motor aparatus [Oceanobacillus iheyensis HTE831] Length = 251 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 80/181 (44%), Gaps = 8/181 (4%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 E + E+ + + + + +K +L + + + L +N+ + G Sbjct: 73 ESTGENSEDGKIDEIEPIYLANEEEEKSTDELDELMMNVSQYLEENNLKDVITANRNERG 132 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IAR 282 +++ + ++ +F+ + L E L IG +L+ +++ GHTD+ P N Sbjct: 133 VVLVLQEK---ILFESGEAEILEEAGPFLNHIGTLLSELDNQVNVEGHTDSRPISNYRYP 189 Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVE 339 NW LS RA S + +++ + R S + G+A +++ S NRR++I++ Sbjct: 190 SNWELSGARASSVVRYFIEAESLHMSRFSTV-GYADTVPLEPNSNEANMSKNRRVEIIIL 248 Query: 340 D 340 D Sbjct: 249 D 249 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 39/88 (44%), Gaps = 2/88 (2%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K++ + W + Y+D +T+++ FF++++ ++ D + + F Sbjct: 1 MKRRSIRHQSKKGAPKWMVTYSDMITLILVFFILLFSMSQIDQTKFDQVTESFQNRMILD 60 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDE 104 S + NP E + +N D IDE Sbjct: 61 FLPSAVPLE--NPTESTGENSEDGKIDE 86 >gi|329904710|ref|ZP_08273911.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium IMCC9480] gi|327547854|gb|EGF32612.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium IMCC9480] Length = 270 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 7/181 (3%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 I + P + E+ ++ + + L+ L V T Sbjct: 77 PPVPIEQPTVLPGRPPAAERQRIELLRREKESMTSIARDILNVLSPLISSGKVRVTQTSR 136 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-A 281 G+ I I +F + E+ L I +VL+ T I I GHTD P N Sbjct: 137 GVSIEINAS---VLFAPGEASLTNESGAALSAIAQVLSQDTHAIQIEGHTDNLPIGNATF 193 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339 NW LS RA S ++ +G++E+R++ + G ++ ++D NRR+++L+ Sbjct: 194 PSNWELSSVRASSVVRLFSNNGIAENRLTAV-GHGSNKPVGSNDTPEGRVRNRRVEVLIL 252 Query: 340 D 340 Sbjct: 253 A 253 >gi|170722824|ref|YP_001750512.1| flagellar motor protein MotD [Pseudomonas putida W619] gi|169760827|gb|ACA74143.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 285 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 72/182 (39%), Gaps = 10/182 (5%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + S+ E + LA L+ ++ + L+ + + Sbjct: 71 EQPLSVKPAEPLIKDSEQTDAGLAQNSVDPLKTISDDVRDAFGDLIKSD---QMTIRGNE 127 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281 + I + ++ +F ++P + +++K+ +L + + G TD P R Sbjct: 128 LWVEIELN---SSLLFGSGDAMPSDKAFDIIEKVANILKPFANPVHVEGFTDNLPIRTAQ 184 Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 NW LS RA S ++L GV+ R++ + G+ ++ +D + NRR+ +++ Sbjct: 185 YPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQPVAGNDTAEGRARNRRVVLVI 243 Query: 339 ED 340 Sbjct: 244 SR 245 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 2/113 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N W + YADF+T+L AFF+VM+ I++ ++ K I Q + Sbjct: 2 RRRRHTEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPER 61 Query: 79 ASKGIF--DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + K I DEQ + ++ I S + T + Sbjct: 62 SMKPIPIGDEQPLSVKPAEPLIKDSEQTDAGLAQNSVDPLKTISDDVRDAFGD 114 >gi|302878266|ref|YP_003846830.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans ES-2] gi|302581055|gb|ADL55066.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2] Length = 281 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 10/171 (5%) Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 ++ K + +++ + + + L+A + V T+ G+++ D + Sbjct: 77 DKRDARMLEQQRKIQAQMKAVDASLREVMGPLIAQGL---VGVHQTKRGVVV---DISAS 130 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAY 293 +F + P LQ++ VL+ + + + GHTD P + NW LS RA Sbjct: 131 TLFREGEEKLQPGAQETLQQVAVVLSRENQSVEVEGHTDDVPIKTTQFPSNWELSSGRAS 190 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 S + L+ GV E R++ + G A ++ +A+D + NRR+ I + + Sbjct: 191 SVVRTLVTYGVPEKRLAAV-GMAANQPVVANDTPENRAKNRRVSITILSPE 240 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 4/112 (3%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +++ + + W I YADF+T+L AFF+VM+ I++ ++ K N Sbjct: 1 MARRRKRAEHDNH--ERWLISYADFVTLLFAFFVVMYSISSVNEGKYKTFSDSLNSAFSE 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 +++ + Q + +K D + E K +K + ++ L Sbjct: 59 --SSATVVPSTQGQLFKVLVDKRDARMLEQQRKIQAQMKAVDASLREVMGPL 108 >gi|238788297|ref|ZP_04632091.1| hypothetical protein yfred0001_7400 [Yersinia frederiksenii ATCC 33641] gi|238723543|gb|EEQ15189.1| hypothetical protein yfred0001_7400 [Yersinia frederiksenii ATCC 33641] Length = 365 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 3/165 (1%) Query: 181 EKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + K + RL L +K+ + + +L G+ I IID +N PMF Sbjct: 69 DSEESRKEEYRLNKLREKLDQLIESDPRLRALRPHLLINMMDEGLRIQIIDSQNRPMFKM 128 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQ 297 S+ P +L+ I +L IS+ GHTD P+ NW LS DRA ++ + Sbjct: 129 GSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYATGERGYSNWELSADRANASRR 188 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 L+ G+ E ++ ++ G A + NRRI ILV ++Q Sbjct: 189 ELLIGGLDEGKVLRVVGMASTMRLKEQTADDPVNRRISILVLNKQ 233 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 31/77 (40%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 MT +MAFFLVMW+++ + I +YF K +T+ +P + Sbjct: 1 MTAMMAFFLVMWLLSVSSPQELTQIAEYFRTPLKVALTSGDKSSSSTSPIPGGGDDPTQQ 60 Query: 101 SIDEHITKNSVDLKIGS 117 + +S + + Sbjct: 61 VGEVRKHIDSEESRKEE 77 >gi|114778393|ref|ZP_01453240.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1] gi|114551356|gb|EAU53913.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1] Length = 251 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 85/251 (33%), Gaps = 13/251 (5%) Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 S+ + + ++ + + + + + + Sbjct: 2 SSNPESVSGKSSMEMIRSHILSDMEEREIEHDQSVTNEGWMVAYLDLMTLLLALFIIMGA 61 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 S + P I +K+ ++D ++I L ++++ Sbjct: 62 VSHSKAGVKMQAPSSPQNTTSEGTPVSDNATIQRQGQKEGMEDNMRRI------LGSNSL 115 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 + + + I + + +F S + + L+ + +VL T I + GH Sbjct: 116 GGVMDVKMSPGQIRLQM---DAALLFKPGQSELDESSRIPLKNLAKVLQTYTGKIEVAGH 172 Query: 272 TDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328 +D++P NW LS RA + + L+ G+ R+ G+A R ++ Sbjct: 173 SDSTPLAGRGYQSNWELSTMRATAVVKALIDFGIEPGRLHAA-GYADTRPLASNATAEGR 231 Query: 329 SANRRIDILVE 339 + NRR++ +E Sbjct: 232 AKNRRVEFTIE 242 >gi|209964330|ref|YP_002297245.1| chemotaxis MotB protein [Rhodospirillum centenum SW] gi|209957796|gb|ACI98432.1| chemotaxis MotB protein [Rhodospirillum centenum SW] Length = 309 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 98/315 (31%), Gaps = 52/315 (16%) Query: 28 NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQ 87 W I Y D +T+LM FL M I G+ Sbjct: 35 EESEEWVISYMDMVTLLMTVFLGMIAI--------------------------LGMQGRL 68 Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY-LSNSQQSEHCKNS 146 PPE + + V + + L+ S Sbjct: 69 APPEPGPETAGGEAQTAAQAAEPVPPPARTVLADQTAPAALAPAPVTLAPSLPGPAPTVP 128 Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 + E G +++ + + L P ++ + A++ Sbjct: 129 MAGFPETGTAGEETSAAPATPDGPPPPPLSPAARAWLQALEAA----------------- 171 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 + V F I I + D+ +F S+ VL ++ +LA I Sbjct: 172 ---GLPPDVGFTVEDRRIAIELRDR---VLFRSGSAALETAGTAVLDRLVPMLARMPGTI 225 Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 ++ GHTD NW LS RA + + L+ +GV R+ + +G A R Sbjct: 226 TVEGHTDPVAIATTRFPSNWELSAARAAAVVRHLVAAGVPAQRL-RATGLADSRPLTTDP 284 Query: 326 PMNSANRRIDILVED 340 + NRR++I+++ Sbjct: 285 ARWAMNRRVEIVIDG 299 >gi|150390475|ref|YP_001320524.1| OmpA/MotB domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149950337|gb|ABR48865.1| OmpA/MotB domain protein [Alkaliphilus metalliredigens QYMF] Length = 243 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 12/208 (5%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + + + S + S E+ + + L + +D K Sbjct: 34 SEIDAKKFQAVMQSFQGSLGVLDSGKTIEDSDYITEAMLEELTTNEQVEWEDFRKLQEIV 93 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH- 261 + L + + +L G+++ D +FD + + +L+ + L Sbjct: 94 ENYLDENGLASDILVLLESRGLILRFHDN---ILFDSGRAELKSRPMEILKDLAGFLDGE 150 Query: 262 --STEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFA 316 + I + GHTD P R + NW LS+ RA + + L++ +GV+ +R S G+ Sbjct: 151 EFQNKHIRVEGHTDTDPLRVTSKYETNWELSVARASNVVRFLIEDAGVTPERFSAA-GYG 209 Query: 317 HHRLKIASDPMN--SANRRIDILVEDRQ 342 +R A+D + + NRR+D+++ + Sbjct: 210 EYRPLAANDTIENKAINRRVDVVILRSE 237 Score = 39.9 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 26/57 (45%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + +W YAD +T+L+ FF++++ + D +A+ Q F L + Sbjct: 2 RKEGSTGSPAWMATYADMVTLLLCFFILLFTFSEIDAKKFQAVMQSFQGSLGVLDSG 58 >gi|124514812|gb|EAY56324.1| putative OmpA family protein [Leptospirillum rubarum] Length = 265 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 84/241 (34%), Gaps = 8/241 (3%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + D K+ S Q + N+ + Q + K Sbjct: 24 ASAPPHDSKLDSAQMSLQNALNDENLKQAAPEQLDKASDALKHARELLKNGAPKKDVDHY 83 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + ++ K K+ +I + +++ + +L + Sbjct: 84 VYLATQRIKIAEQKEKAAELQKEIKKASAHRDQIMLEANQAKIEHLKRELLKMKAKETNR 143 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284 ++ +FD + + P + ++K+ E + + I G+TD++ A N Sbjct: 144 -GLVLTLGNVLFDLNKADLKPGGMRTIKKLAEFMQSDPKRNVMIEGYTDST---GTAAYN 199 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 +LSL RA S L+ G++ RI G+ ++ NRR++I++ D + Sbjct: 200 EKLSLKRAESVRDALVNDGINPQRIVT-KGYGPKYPIASNKTADGRQQNRRVEIVISDEK 258 Query: 343 G 343 G Sbjct: 259 G 259 >gi|310644267|ref|YP_003949026.1| ompa/motb domain protein [Paenibacillus polymyxa SC2] gi|309249218|gb|ADO58785.1| OmpA/MotB domain protein [Paenibacillus polymyxa SC2] Length = 271 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 89/231 (38%), Gaps = 13/231 (5%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 S+ K+Y + ++ + S + S + ++ + ++ Sbjct: 43 SSLDAKKYDVVVQSLQDTFHKGDSILEQGSGITGTADRYTSKNPPATKQPASNKKEAGST 102 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L++ + K++K LQ+L I ++ + + + GI+I++ D+ + Sbjct: 103 KLTEREQAFRKQEKELQNLMGVIQEYITD---NKLQNQIFVSDQPRGIVITLNDR---FL 156 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-----RNIARDNWRLSLDR 291 FD+ + + L K+ + ISI GHTD PF + +DNW LS R Sbjct: 157 FDQGRAALKQGSANTLSKLASLFRDLKTPISIEGHTDNIPFTRSSNSSTYKDNWELSGAR 216 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 A S + + + +G+A R + NRR++I V Sbjct: 217 ALSVLRFFIDREQLSPSGFQYAGYADTRPVGDNSTEAGRQKNRRVEITVLR 267 >gi|326796443|ref|YP_004314263.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] gi|326547207|gb|ADZ92427.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] Length = 280 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 98/336 (29%), Gaps = 79/336 (23%) Query: 10 ENDQFIIIKKK---VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 E + I+ +++ W + YADF+T+L AFF Sbjct: 3 ERPKPIVRRRREPYNPRSSADKGKDRWVLSYADFITLLFAFF------------------ 44 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 L + S + + D N D IG + ++ + Sbjct: 45 -------VALYSISLKQAGNEKQLTETLNGVFDAVQKSVKPINIGDPIIGEPDGEEILEV 97 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + NS Sbjct: 98 EPEEAEESVSKGEEGSPDNSTPSQI----------------------------------- 122 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 L + ISS S L V + I + + ++ +F + Sbjct: 123 -----YDLLNEVISSQFSSLTQSG---KVSISENESWISLEL---KSGLLFGEGEYELTN 171 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLMKSGV 304 E + +L I +L + + G+TD P A NW LS RA + L+ GV Sbjct: 172 EAVALLIVISNILNSYPSPVLVEGNTDDQPVSGAAPFSSNWSLSSLRASAVVDELVFRGV 231 Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338 + ++ GF+ K+ +D + NRR+ + + Sbjct: 232 NP-KLIAPIGFSSEHPKVRNRNDDSRAQNRRVTLKI 266 >gi|284040434|ref|YP_003390364.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283819727|gb|ADB41565.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 537 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 86/252 (34%), Gaps = 9/252 (3%) Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 + + + + + N GST+ + L + + + Sbjct: 292 GKGDIVRVKLTDDTPANQPGKVGGSTDVATNTDATRPDPVALISGKVIDQLTGKPIEARI 351 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + L + ++ + + R +A+ + L+ Sbjct: 352 IYQTLPDGAEAGEATSDPITGEYKIVLPYGQRYTMRAVAKDFIAEGANIDLTQPK--GYQ 409 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 + + I + + + N FD S PE+ L ++ L + ++ +RGH Sbjct: 410 QITDQQLKLIPIEVGSVVRLNNIFFDTGKSELRPESGPELDRLVTTLNDAPKMTIEVRGH 469 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 TD + N +LS DRA + + + G+ DRI+ GF + +++ Sbjct: 470 TDNT---GSNEINAKLSQDRADAVREYFISKGIEPDRIAS-KGFGEAKPTASNNTEEGRQ 525 Query: 331 -NRRIDILVEDR 341 NRR++ ++ + Sbjct: 526 QNRRVEFVIVKK 537 >gi|83592409|ref|YP_426161.1| hypothetical protein Rru_A1073 [Rhodospirillum rubrum ATCC 11170] gi|83575323|gb|ABC21874.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170] Length = 375 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 98/295 (33%), Gaps = 16/295 (5%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 + + + + + + +S+ + L+ + ++ LK + Sbjct: 82 LSQLSGQLRDANARAESLAAQVREVDDTKFENSRLRDQLAGVAKLEQDVAALKALRAELE 141 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK--GKDLCKSTDLEKSINKEENYFLPPLS 179 + RL + +E + R L + +I + + + Sbjct: 142 AEVARLGGQLGEKEGQIAAERTLSEEARAHAALLNAQLEQLQAQLGAIQQALDASEARSA 201 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMF 237 ++K++ RL + L ++ + R + I ++ +F Sbjct: 202 EQKVVIADLGTRLNAALAEKVQELQRYRSEFFGRLREVLGAREDVRIVGDRFVFQSEVLF 261 Query: 238 DKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASPFRNIAR-DNWRLS 288 SS P L + L ++ + GHTD P A NW+LS Sbjct: 262 PSGSSQLQPAGQDTLASLATTLMAIAARIPGDVDWILRVDGHTDRRPINTAAFQSNWQLS 321 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 RA S L++ GV +R+ +GF ++ + NRRI++ ++ R Sbjct: 322 AARAISVVNFLIERGVPPERL-AAAGFGEYQPIDPGQSDEALARNRRIELKLDQR 375 >gi|330502789|ref|YP_004379658.1| flagellar motor protein MotD [Pseudomonas mendocina NK-01] gi|328917075|gb|AEB57906.1| flagellar motor protein MotD [Pseudomonas mendocina NK-01] Length = 269 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 73/203 (35%), Gaps = 10/203 (4%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 K + +S G ++ EE + LQ +A + Sbjct: 41 NEGKYKILSESLTGVFNQPDRSIKPIPVGEERPRTSEPDNTSMDDPSSDSTLQSIASSVR 100 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L+ + + I I + ++ +F +IP + +++K+ ++LA Sbjct: 101 EAFGDLIQSD---QLTVRGNEMWIEIEL---SSSLLFPSGDAIPNNQAFDIIEKVAKILA 154 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G TD P + NW LS RA S ++L GV R++ + G+ + Sbjct: 155 PYQNPVKVEGFTDNLPIQTAQYPTNWELSTARASSIVRMLAMDGVDPSRLAAV-GYGEFQ 213 Query: 320 LKIASDPM--NSANRRIDILVED 340 + NRR+ +++ Sbjct: 214 PVADNATAEGRGRNRRVVLVISR 236 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 48/106 (45%), Gaps = 4/106 (3%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +++ + + W + YADF+T+L AFF+VM+ I++ ++ K + + Sbjct: 1 MARRRQHEEHENH--ERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSESLTGVFNQ 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 + K I + P S + S+D+ + +++ S + Sbjct: 59 PDRSIKPIPVGEERPRTSE--PDNTSMDDPSSDSTLQSIASSVREA 102 >gi|34497269|ref|NP_901484.1| flagellar motor protein MotD [Chromobacterium violaceum ATCC 12472] gi|34103125|gb|AAQ59488.1| chemotaxis motB protein [Chromobacterium violaceum ATCC 12472] Length = 277 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 10/188 (5%) Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 T ++ + S + + +L L + ++ LS LV V Sbjct: 67 QTTPPTGGANTMIEIPQTKPIAKSTARNRKAEEAAKLGQLTQNLAKALSPLVQSG---EV 123 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275 + GI I I D +F ++P +++ ++ + ++LA I + G TD + Sbjct: 124 TITQSNQGIHIDIRDS---ALFAVGQAVPNQQSMPLMSNMAKLLAGVDNAIKVEGFTDDA 180 Query: 276 PFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 P R NW LS RA ++ +SGV R+ + G ++ + + NR Sbjct: 181 PIRTPVFPSNWELSAARAGGVVRLFQESGVDPQRLVAV-GHGANQPVADNATADGRARNR 239 Query: 333 RIDILVED 340 R+ I V+ Sbjct: 240 RVTISVQA 247 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 4/103 (3%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ ++ N W + YADF+T+L AFF+VM+ I++ ++ + + Sbjct: 4 RRRKQEEEHENHERWLVSYADFITLLFAFFVVMYAISSLNEGKYRVMSSAIMDAF----R 59 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 + I + PP + I++ + I K++ + K Sbjct: 60 SGTTITVQTTPPTGGANTMIEIPQTKPIAKSTARNRKAEEAAK 102 >gi|307293778|ref|ZP_07573622.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1] gi|306879929|gb|EFN11146.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1] Length = 351 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 89/231 (38%), Gaps = 2/231 (0%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 +K + + + + K +I + Sbjct: 58 TTEKQRKGLADYFTPTLVQVKEGSAGSNGMFGGDSMTAKENYPTTGGQGNLAITIPRDAS 117 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV-ADNIVKGVLFETTRTGILISIIDQRN 233 K + + + + K++ + ++ + + K V F TR G+ I +ID+ + Sbjct: 118 GTKDQGGKATKAADRAKFESIKKELEARMARRHGINKLRKNVRFTETREGLRIDLIDEAD 177 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRA 292 MF + LP+ ++ ++ + + + +RGHTD P+ + +NW LS RA Sbjct: 178 FAMFAMGTDRLLPQARELVDEVAKTIRTMPNPLIVRGHTDGLPYSSGQTMNNWMLSSARA 237 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 + + L SG+ DR ++I G A D + NRR+ I++ +G Sbjct: 238 EATRKALAASGIGNDRFARIEGVADREPFAKGDVYDPRNRRMSIILGWSRG 288 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 89/224 (39%), Gaps = 3/224 (1%) Query: 3 SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62 N+ + II+KK + ++ G+WK+ YADF+T +MAFFL+MW++ AT + + Sbjct: 4 KKRGANEPEPRPIIVKKIIVEGHGGHHGGAWKVAYADFVTAMMAFFLLMWLLGATTEKQR 63 Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 K + YF P + S G +++ + + ++ T + Sbjct: 64 KGLADYFTPTLVQVKEGSAGSNGMFGGDSMTAKENYPTTGGQGNLAITIPRDASGTKDQG 123 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK---DLCKSTDLEKSINKEENYFLPPLS 179 + + ++ + + K + ++ + + +E F Sbjct: 124 GKATKAADRAKFESIKKELEARMARRHGINKLRKNVRFTETREGLRIDLIDEADFAMFAM 183 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 L + ++ + ++AK I + + L+ G+ + + +T Sbjct: 184 GTDRLLPQARELVDEVAKTIRTMPNPLIVRGHTDGLPYSSGQTM 227 >gi|270262419|ref|ZP_06190690.1| hypothetical protein SOD_c00360 [Serratia odorifera 4Rx13] gi|270043103|gb|EFA16196.1| hypothetical protein SOD_c00360 [Serratia odorifera 4Rx13] Length = 321 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 3/180 (1%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGI 224 + + L + + + RL L +K+ + + +L G+ Sbjct: 86 GDDPTQKDGLVKKQIDTLEKRDEELRLNKLREKLDELIESDPRLKALRPHLLINMMDEGL 145 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--R 282 I IID +N PMF S+ +L+ I +L IS+ GHTD P+ Sbjct: 146 RIQIIDSQNRPMFKTGSAQVESYMRDILRAIAPILNDLPNKISLSGHTDDIPYATGERGY 205 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 NW LS DRA ++ + L+ G+SE ++ ++ G A ++ NRRI +LV ++Q Sbjct: 206 SNWELSADRANASRRELIAGGLSEGKVLRVVGMAATMSLKQHGADDAINRRITVLVLNKQ 265 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 46/107 (42%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +++ +K ++ GSWKI YADFMT +MAFFLVMW++ I +YF Sbjct: 3 QNHPVVLVRKRKSHQAGHHGGSWKIAYADFMTAMMAFFLVMWLLAIASPQELTQIAEYFR 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 K +T E +P + ++++ + Sbjct: 63 TPLKVALTTGDKSSSESSPIPGGGDDPTQKDGLVKKQIDTLEKRDEE 109 >gi|126662605|ref|ZP_01733604.1| possible outer membrane protein [Flavobacteria bacterium BAL38] gi|126625984|gb|EAZ96673.1| possible outer membrane protein [Flavobacteria bacterium BAL38] Length = 467 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 87/269 (32%), Gaps = 16/269 (5%) Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 G+ + + D + K K Q E+ + +++ Sbjct: 201 GLTFKFGGKDTDGDGIYDKDDACPEVAGLPEFKGCPDTDKDGIQDSEDACPEEAGTKELN 260 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL-AMKRKKRLQDLAKKIS 200 C ++ +D C K +N + ++ + + Sbjct: 261 GCPDNDGDGIINSEDACPEEKGTKMMNGCPDADGDGVADKDDNCPTVAGAKDNAGCPWPD 320 Query: 201 STLSGLVADNIVKGVL--------FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + G+ + + + + D T +F+ + +TI VL Sbjct: 321 TDGDGVADKDDKCPTVAGTVANNGCPEVSDDTMKKLNDYGKTILFNSGKASFQKQTIPVL 380 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 Q + +L S+ GHTD++ N +LS +RA + L+++G+ R+S Sbjct: 381 QAMTAILKEYPTAKFSLEGHTDST---GADALNQKLSEERAAAVKNFLVENGIDASRLSS 437 Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILV 338 GF ++ NRR+++ + Sbjct: 438 -KGFGESMPVDSNKTAKGKANNRRVEVKL 465 >gi|323341391|ref|ZP_08081635.1| flagellar motor protein B [Lactobacillus ruminis ATCC 25644] gi|323091268|gb|EFZ33896.1| flagellar motor protein B [Lactobacillus ruminis ATCC 25644] Length = 267 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 74/201 (36%), Gaps = 9/201 (4%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPP-LSKEKILAMKRKKRLQDLAKKISSTLS 204 ++ + G+ K + K++ + R + Q L + Sbjct: 67 AVDNVIDMGETATKGKGASSASTKKQAAASEQHVQNSLSKQQARVQERQQLKEVAEKLKQ 126 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST- 263 + G+ +++ ++ +F+ S+ +L K+ L + Sbjct: 127 DIQNTGRAGNTTVSYESDGVHLNL---DSSILFNSGSADLSDAVKQMLDKLVPDLKQVSS 183 Query: 264 EVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 + + G+TD P R+ NW LS RA + + + G + + +A ++ K Sbjct: 184 NPVIVAGYTDNVPVSKRSNYASNWELSSARAVTVMRYFVSKGAISESNVSVQAYAENKPK 243 Query: 322 IASDPMN--SANRRIDILVED 340 ++D + NRR++I+++ Sbjct: 244 ASNDTDEGKAQNRRVEIIIQK 264 >gi|226310457|ref|YP_002770351.1| chemotaxis MotB protein [Brevibacillus brevis NBRC 100599] gi|226093405|dbj|BAH41847.1| chemotaxis MotB protein [Brevibacillus brevis NBRC 100599] Length = 269 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 75/190 (39%), Gaps = 8/190 (4%) Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 L + + +EK L +K +DL K + + + + + Sbjct: 73 PLDPQLQQQTLHKGAQEAEKQKTEEEKRLEEAVRKETEDLKKLQTKLDGYIQQNKLQDKL 132 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275 + T G+LI+I+D +FD + PE + ++ +L + +++ GHTD Sbjct: 133 QTKLTDEGLLITILDN---ALFDSGKADLKPEARKLASEMAGMLVPHPKKVTVTGHTDNV 189 Query: 276 PFRNIAR-DNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN 331 P R NW LS R+ + + +L + + S +G + + D + N Sbjct: 190 PIRRAEFPSNWDLSAKRSVNFLKVLLENKNLDPTKFSA-TGLGEYHPVAPNTTDEGRAKN 248 Query: 332 RRIDILVEDR 341 RR+++ + Sbjct: 249 RRVEVAILRD 258 Score = 57.3 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 56/170 (32%), Gaps = 1/170 (0%) Query: 16 IIKKKVAIDDTPNN-LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 + K+ + SW I YAD +T+L+A F+V++ + D + + F+ Sbjct: 1 MAKRPKRHAHHEEHMDESWLIPYADLLTLLLALFIVLFASSEMDAKKFDQMVRSFSVAIN 60 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 P+ Q + + K + ++ +K+ + Sbjct: 61 GGTGVMNYPSPVPLDPQLQQQTLHKGAQEAEKQKTEEEKRLEEAVRKETEDLKKLQTKLD 120 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 QQ++ T+ +++G + + K + ++ Sbjct: 121 GYIQQNKLQDKLQTKLTDEGLLITILDNALFDSGKADLKPEARKLASEMA 170 >gi|254497489|ref|ZP_05110282.1| flagellar motor protein MotD [Legionella drancourtii LLAP12] gi|254353304|gb|EET12046.1| flagellar motor protein MotD [Legionella drancourtii LLAP12] Length = 255 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 73/189 (38%), Gaps = 8/189 (4%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 K S + + NK+ +++ KK + ++ +++ Sbjct: 43 TSKYKSLSEGMNTAFNKKAQENSEQSTEDIKDGPHTKKVYGKFQDGLD-DINQSLSELED 101 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 + + I + D ++ +F + E +V L +I L S ++SI G+T Sbjct: 102 QNYKINRQKGWIEL---DIKSGALFGSGDADLKAEALVKLMQIAGKLKKSHAIVSIEGYT 158 Query: 273 DASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNS 329 D P NW LS RA S +VL G+ RI ++G+ + D + Sbjct: 159 DNVPIETPQYPSNWELSATRAASVGRVLNAYGIDSHRIM-VTGYGDQYPIADNVTDVGRA 217 Query: 330 ANRRIDILV 338 NRR+ I++ Sbjct: 218 LNRRVSIII 226 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 69/213 (32%), Gaps = 3/213 (1%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 +K+ + ++ W + YADF+T+L AFF+VM+ I++ + K++ + N Sbjct: 4 RKRKVEEHVDHH--RWIVSYADFITLLFAFFVVMYAISSLNTSKYKSLSEGMNTAFNKKA 61 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + E ++ D N ++ N K Q+ + S + Sbjct: 62 QENSEQSTEDIKDGPHTKKVYGKFQDGLDDINQSLSELEDQNYKINRQKGWIELDIKSGA 121 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + K + +I E Y + E + A Sbjct: 122 LFGSGDADLKAEALVKLMQIAGKLKKSHAIVSIEGYTD-NVPIETPQYPSNWELSATRAA 180 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIID 230 + L+ D+ V + I ++ D Sbjct: 181 SVGRVLNAYGIDSHRIMVTGYGDQYPIADNVTD 213 >gi|238751745|ref|ZP_04613233.1| hypothetical protein yrohd0001_35140 [Yersinia rohdei ATCC 43380] gi|238710016|gb|EEQ02246.1| hypothetical protein yrohd0001_35140 [Yersinia rohdei ATCC 43380] Length = 339 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 3/215 (1%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 L+ + + S S + + + + K + Sbjct: 19 PQELAQIAEYFRTPLKVALTSGDRSSSSSSPIPGGGDDPTQQDGEVRKHIDSAESRKEEY 78 Query: 191 RLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 RL L +K+ + + +L G+ I IID +N PMF S+ P Sbjct: 79 RLNKLREKLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQNRPMFKMGSAQVEPYMR 138 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L+ I +L IS+ GHTD P+ N NW LS DRA ++ + L+ G+ E Sbjct: 139 DILRAIAPILNDIPNKISLSGHTDDLPYANGERGYSNWELSADRANASRRELLIGGLDEG 198 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A + NRRI ILV ++Q Sbjct: 199 KVLRVIGMASTMRLKEQAADDPVNRRISILVLNKQ 233 Score = 59.2 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 31/77 (40%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 MT +MAFFLVMW+++ + I +YF K +T+ +P + Sbjct: 1 MTAMMAFFLVMWLLSVSSPQELAQIAEYFRTPLKVALTSGDRSSSSSSPIPGGGDDPTQQ 60 Query: 101 SIDEHITKNSVDLKIGS 117 + +S + + Sbjct: 61 DGEVRKHIDSAESRKEE 77 >gi|70729063|ref|YP_258799.1| flagellar motor protein MotD [Pseudomonas fluorescens Pf-5] gi|68343362|gb|AAY90968.1| motB protein [Pseudomonas fluorescens Pf-5] Length = 294 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 73/194 (37%), Gaps = 10/194 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 DS++ D + + L+ +A IS+ L++ Sbjct: 58 DSDRSLKPIPIGDERPKTVTPAKPLVKDSDQTDAGIAGASDPLKSIADDISAAFGDLISS 117 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 N + + I + ++ +F ++P + ++ K+ ++L I + Sbjct: 118 N---QMTVRGNELWVEIELN---SSLLFGSGDAMPSDQAFTIIDKVAKILKPFDNPIHVE 171 Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327 G TD P + NW LS R+ S ++L GV+ R++ + G+ + + Sbjct: 172 GFTDNLPIQTAQYPTNWELSSARSASIVRMLAMQGVNPARMASV-GYGEFQPVANNATAE 230 Query: 328 -NSANRRIDILVED 340 + NRR+ ++V Sbjct: 231 GRARNRRVVLVVSR 244 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 7/118 (5%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K I + + + Sbjct: 3 RRRQQEEHVNHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISEALIGVFTDSDRS 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 K P + ++ + + K+S G + + ++I Sbjct: 63 LK-------PIPIGDERPKTVTPAKPLVKDSDQTDAGIAGASDPLKSIADDISAAFGD 113 >gi|13473358|ref|NP_104925.1| hypothetical protein mlr3926 [Mesorhizobium loti MAFF303099] gi|14024107|dbj|BAB50711.1| mlr3926 [Mesorhizobium loti MAFF303099] Length = 343 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 103/326 (31%), Gaps = 22/326 (6%) Query: 37 YAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 + D T+L+A F++ + + K + N L Sbjct: 19 FVDALSTLLLAIMFLLTVFVLAQFLLGREISGKDTVLARLNSQINELTQLLALERSTAQD 78 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + S N K+ ++ + Q + + +L++ Sbjct: 79 KDDSLANLQASLSAAEAEKSRLEQLLAQGAGAGDQANQRAAALSGELDSQRQISQQALSQ 138 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + ++ N +RL + L+ +D Sbjct: 139 VEILNQQIAALRKQIGALEDALNVSEARDRDSNTKIADLGRRLNVALAQRVQELNRYRSD 198 Query: 210 NIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-------- 259 + R I I ++ +F S + V ++K+ + + Sbjct: 199 FFGRLREILADRENIRIVGDRFVFQSEVLFPTGSEVINDAGKVEMKKLADAIIELQKEIP 258 Query: 260 AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTD P RDNW LS R+ S + L+++GV +R+ GF Sbjct: 259 PEINWVLRVDGHTDNKPLSGTGRFRDNWELSTARSTSVVKFLIENGVPANRLVAA-GFGE 317 Query: 318 HRLKIASDPMNSA--NRRIDILVEDR 341 + +D + NRRI++ + +R Sbjct: 318 FQPLDPADTDEARNKNRRIELKLTER 343 >gi|254302883|ref|ZP_04970241.1| possible outer membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323075|gb|EDK88325.1| possible outer membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 212 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 10/146 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A + ++I++ F S+ L I + L Sbjct: 74 DNQEKELKAKLQGTQAEVKKDGNALVINL---PGGVTFASDSANITSSFYSALNGIAQSL 130 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + E I + G+TD++ N LS RA + Q L+ GVS RI +GF Sbjct: 131 NNYPETRIQVNGYTDST---GNDAHNQELSQRRANAVAQYLVAQGVSSSRIVA-NGFGSS 186 Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342 ++ NRR++I + Q Sbjct: 187 NPIASNSTQEGRLQNRRVEIKILPAQ 212 >gi|153931184|ref|YP_001384895.1| chemotaxis motB protein [Clostridium botulinum A str. ATCC 19397] gi|152927228|gb|ABS32728.1| chemotaxis protein MotB [Clostridium botulinum A str. ATCC 19397] Length = 420 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ D + +N+ V + GI+I + D +F+ + P++ Sbjct: 88 RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306 ++ KI ++A + I GHTD P +N NW LS RA + + ++ + Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 R + G+ +R ++ + NRR++I++ ++ Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANRAKNRRVNIVIVSKE 241 >gi|119947181|ref|YP_944861.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37] gi|119865785|gb|ABM05262.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37] Length = 306 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 3/154 (1%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ LQ L K++ + + + +L E G+ I + + M+++ + P Sbjct: 113 QEELQFLMKRLDDLVEEI---DASNNILIEVIPDGLRILLTASEDQKMYERGGTQLTPFY 169 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + V + I GHTD++P+ NW LS RA SA +++ G+ + Sbjct: 170 EDMLLEFSSVFNAIENGVVITGHTDSAPYNGQQVSNWELSSQRANSARRIMELGGLKKAN 229 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 I+++ G A+ + + ++S NRR+++++ RQ Sbjct: 230 ITQVIGMANTKPIDKQNELSSINRRVEVIILTRQ 263 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 46/150 (30%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 + +WK+ +AD M LM FLV+W + D K+ I YF + Sbjct: 15 RHQAHEEHSSAWKLAFADLMVSLMCVFLVLWALQIADKKEKEDIIHYFRTGQMSTPQERM 74 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 + D + D + T N+ ++ Q++ ++ + S Sbjct: 75 FAQKNSLVSIPLMSSAKDNNTDINDTVNNALIQGEYNTQEELQFLMKRLDDLVEEIDASN 134 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + + D + + Sbjct: 135 NILIEVIPDGLRILLTASEDQKMYERGGTQ 164 >gi|317129962|ref|YP_004096244.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522] gi|315474910|gb|ADU31513.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522] Length = 258 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 76/188 (40%), Gaps = 11/188 (5%) Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 + D + + +N P + + ++L DL + L L A+N+ + Sbjct: 67 PFDNPAEDRDTKDDPFDNEVDPFENFLDSKKEENNQQLDDL---LVEVLDFLEANNLYES 123 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274 + G+++ + +Q +F+ + + + + L K+G ++ I + GHTD+ Sbjct: 124 ISASRDDRGVVLVLQEQ---VLFESARAELISDATAFLDKVGTLIESVPNPIMVEGHTDS 180 Query: 275 SPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN--SA 330 P NW LS RA S + L+ + + R + G+ R + Sbjct: 181 RPIETFQFPSNWELSGARASSVIRYLVDNHDLDQSRFVSV-GYGDTRPIAPNTTNENLQK 239 Query: 331 NRRIDILV 338 NRR+ I++ Sbjct: 240 NRRVVIVI 247 >gi|295136349|ref|YP_003587025.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda SM-A87] gi|294984364|gb|ADF54829.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda SM-A87] Length = 316 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 91/220 (41%), Gaps = 17/220 (7%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 S ++ ++ +S + ++L + ++ E L L K+ +R L+ Sbjct: 89 SYDALEKNSSAAIAENSRQNRELLAQLEEKEKTLAAEQARLEKLQKDLAARSQRIDELEG 148 Query: 195 L-------AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 L + +S + D KG+ E + +S+ N +F+ S + Sbjct: 149 LIAAKDAKMNALKDAISKALTDFEGKGLTVEQRDGKVYVSM---ENKLLFNSGSWAVNAD 205 Query: 248 TIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKS-G 303 + ++G VLA + ++ I GHTD P+ +DNW LS RA + Q+L ++ Sbjct: 206 GRQAVNQLGSVLAQNPDISVLIEGHTDNVPYGGNGPLKDNWDLSTKRATAIVQILRENSN 265 Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 + ++ G + +D + NRRI++++ + Sbjct: 266 IDPQNLTAA-GRGEYAPVATNDTAEGKAKNRRIEVILTPK 304 >gi|331006366|ref|ZP_08329676.1| Flagellar motor rotation protein MotB [gamma proteobacterium IMCC1989] gi|330419826|gb|EGG94182.1| Flagellar motor rotation protein MotB [gamma proteobacterium IMCC1989] Length = 321 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 7/169 (4%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 ++ K A + +L ++ L+ + + + IS+ Sbjct: 57 SEQQNTTETKQAAESPSASVIELPTLETAFYQQLLPLIEEGAIEVSSNELWLQISL---S 113 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDR 291 N +FD + P + V+ +I ++ + I + G TD NW+LS R Sbjct: 114 NRILFDIGNVKPSEQANEVIAQIATIMKDTVNPIRVEGFTDNLAINTAQFPSNWQLSAAR 173 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A + Q+L SGVS ++S + G+ + + + NRR+ +++ Sbjct: 174 ASAIVQLLSASGVSPSQLSAV-GYGEFQPIADNSSEAGRAKNRRVVLMI 221 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 67/185 (36%), Gaps = 5/185 (2%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 ++K++ + W + YADF+T+L AFF+VM+ ++ ++ + + N F Sbjct: 1 MLKRRSLDLHINH--ERWLVSYADFVTLLFAFFVVMYSVSQINESKYEELTSTLNGFFSE 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK---QYQRLENNIF 132 ++ ++P + + ++ + + Q +F Sbjct: 59 QQNTTETKQAAESPSASVIELPTLETAFYQQLLPLIEEGAIEVSSNELWLQISLSNRILF 118 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + N + SE + + + KD +E + S ++ A + + Sbjct: 119 DIGNVKPSEQANEVIAQIATIMKDTVNPIRVEGFTDNLAINTAQFPSNWQLSAARASAIV 178 Query: 193 QDLAK 197 Q L+ Sbjct: 179 QLLSA 183 >gi|152975140|ref|YP_001374657.1| flagellar motor protein MotS [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023892|gb|ABS21662.1| OmpA/MotB domain protein [Bacillus cytotoxicus NVH 391-98] Length = 225 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + + F + + L K + + + + Sbjct: 4 RPPKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDAEQVDAEVMENTI 63 Query: 180 KEKILAMKRKK-RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + L G V +N ++ V TG+ I I+D +FD Sbjct: 64 PDISHEKNSEKVSSKKRMDNLYKKLKGYVTENGIQEVQVYREDTGVSIVIVDNL---IFD 120 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297 + PE ++ ++ I + GHTD+ P RN NW LS RA + Sbjct: 121 TGDANVKPEAKEIISRLAGFFQSVPNPIVVEGHTDSRPIRNAKFPSNWELSSARAANMIH 180 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ + +R++ + G+A + +D + NRR+ I V++ Sbjct: 181 HLIEVYEIDPNRLAAV-GYADTKPVAPNDSPDNWAKNRRVVIYVKE 225 >gi|292489120|ref|YP_003532007.1| chemotaxis protein MotB [Erwinia amylovora CFBP1430] gi|292900239|ref|YP_003539608.1| motility protein B [Erwinia amylovora ATCC 49946] gi|291200087|emb|CBJ47213.1| chemotaxis protein (motility protein B) [Erwinia amylovora ATCC 49946] gi|291554554|emb|CBA22155.1| Chemotaxis protein motB (Motility protein B) [Erwinia amylovora CFBP1430] gi|312173278|emb|CBX81533.1| Chemotaxis protein motB (Motility protein B) [Erwinia amylovora ATCC BAA-2158] Length = 302 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 78/202 (38%), Gaps = 3/202 (1%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 K + + +K+ K + L+ + ++ + Sbjct: 64 PIKPTMGQGNKTSFSESIIPGGGDDVIRQEGEVYKHQVDKLDKFKNVESLKKVKTRLETM 123 Query: 203 LS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + N ++ T G++I I D + PMF S P +LQ + +L Sbjct: 124 IESDPRLSNFKSNLMLTLTDDGLMIQITDSQERPMFKTGSEAPESYMNGILQALVPLLKE 183 Query: 262 STEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 +S+ GHTD+ + + NW LS RA +A +VL+ +G+ +DRI ++ G Sbjct: 184 LPNSLSLTGHTDSLAYAGGSGGYSNWELSTGRANAARRVLINAGLDDDRILRVIGTGSRM 243 Query: 320 LKIASDPMNSANRRIDILVEDR 341 N NRRI +LV + Sbjct: 244 GLADISADNPMNRRISVLVLSK 265 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 44/90 (48%) Query: 14 FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 II ++K ++ G+WKI YADFMT +MAFFLVMW++ ++ D ++ I YF Sbjct: 6 PIIRQRKRKHKKHAHHGGTWKIAYADFMTAMMAFFLVMWLLASSSDMQREMIADYFRMPI 65 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSID 103 K M ++ + I + Sbjct: 66 KPTMGQGNKTSFSESIIPGGGDDVIRQEGE 95 >gi|325954396|ref|YP_004238056.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] gi|323437014|gb|ADX67478.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] Length = 297 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 101/242 (41%), Gaps = 15/242 (6%) Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163 + L+ TN++ + +N L+ S+ ++++ ++ + L K+ Sbjct: 52 TQKNEEIAQLQQELTNKQTELDEQQNAFEALAQDS-SKELQDNIEKNRDLLNQLAKTRSD 110 Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 S E + +++ + L +++K + L + IS L G + Sbjct: 111 LTSKETELQAKIKRINELENLLAQQRKAIAKLKQSISDALRGFEGKG----ITVYEKNGQ 166 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR---N 279 I +S+ N +F E I L ++ VL + I I GHTD+ P+ Sbjct: 167 IYVSM---ENKLLFSTGKWDVRQEGISALVQLSSVLKKQNDLNILIEGHTDSVPYGAKQG 223 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 +DNW LS+ RA + ++L K GV +++ G + + + + + NRR++I+ Sbjct: 224 DVQDNWDLSVMRATAVTKILQKDGVRPTQMTAA-GRSKYIPIGDNATESGKAKNRRVEII 282 Query: 338 VE 339 + Sbjct: 283 IT 284 >gi|319781002|ref|YP_004140478.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166890|gb|ADV10428.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 343 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 116/330 (35%), Gaps = 30/330 (9%) Query: 37 YAD-FMTVLMAFFLVMWIINATDDDTK---KAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 + D T+L+A +M+++ + I + L + + Sbjct: 19 FVDALSTLLLA---IMFLLTVFVLAQFLLGREISGK-DTALSRLNSQINELTQLLALERS 74 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 ++Q+K D + + ++ + + + + + + Sbjct: 75 TAQDKDDSLANLQASLSAAQAEKSRLERLLAQGAGAGDAANQRAAALGGELDSQRQISQQ 134 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + ++ K+ L+ +I ++ DL ++++ L+ V + Sbjct: 135 ALSQVEILNQQIAALRKQIGALEDALNVSEIRDRDSNTKIADLGRRLNVALAQRVQELNR 194 Query: 213 ---------KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---- 259 + +L + I+ ++ +F S + V ++K+ + + Sbjct: 195 YRSDFFGRLREILADRENIRIVGDRFVFQSEVLFPTGSEVINDAGKVEMKKLADAIIELQ 254 Query: 260 ----AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 V+ + GHTD P RDNW LS R+ S + L+++GV +R+ Sbjct: 255 KEIPPEINWVLRVDGHTDNKPLSGTGRYRDNWELSTARSTSVVKFLIENGVPANRLVAA- 313 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDR 341 GF + +D + NRRI++ + +R Sbjct: 314 GFGEFQPLDPADTEEARNKNRRIELKLTER 343 >gi|150019639|ref|YP_001311893.1| OmpA/MotB domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149906104|gb|ABR36937.1| OmpA/MotB domain protein [Clostridium beijerinckii NCIMB 8052] Length = 244 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 11/159 (6%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + ++ ++ K I + + V + G+ ISI D +F+ + L Sbjct: 83 AEEDKMTEVKKMIEEEIKK---EGYSDKVKVDLNSEGLAISIQD---VVLFNSGEADVLK 136 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMK-SGV 304 + +L KI +L I + G+TD P R NW LS RA + ++ G+ Sbjct: 137 DVSQLLLKISHMLYGLDNEIKVAGYTDNVPINNGKFRSNWDLSAMRAINVLNYMVSTGGI 196 Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 ++++I I + H K ++ + NRR++I V + Sbjct: 197 NQEKI-SIQAYGEHMPKASNATEDGRAKNRRVEIFVVRK 234 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 4/134 (2%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W + Y+D +T+L+A F+VM+ + TD +++ + FN Sbjct: 3 KKKQHHEEHVDEAWLLPYSDMLTLLLALFIVMFAMGQTDKAKFQSMAKEFNMIFA----G 58 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 G+ + S + K + K+ KK+ + + S Sbjct: 59 GTGVMHQDGNSAISMEESGVSDNKAEEDKMTEVKKMIEEEIKKEGYSDKVKVDLNSEGLA 118 Query: 140 SEHCKNSLTRDSEK 153 L E Sbjct: 119 ISIQDVVLFNSGEA 132 >gi|251794146|ref|YP_003008877.1| OmpA/MotB domain protein [Paenibacillus sp. JDR-2] gi|247541772|gb|ACS98790.1| OmpA/MotB domain protein [Paenibacillus sp. JDR-2] Length = 272 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 84/227 (37%), Gaps = 12/227 (5%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + + S + S ++ ++ S Sbjct: 37 AASSTDARKFERMSEAFSAAFNSGAGIMDNPSVIKSGEQPQQQIDDGKKTSKDRHEDTES 96 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + L K ++ L+ L K++ + + + + + ++ ++I+I D +F Sbjct: 97 NLQELIKKEQEDLEKLKKQLDQYIKK---NGLSSELETKLNQSQLMITISDN---ALFAS 150 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297 S E+ + I ++L T I + GHTD P R + NW LS RA Sbjct: 151 GSDALKTESKELAANISKMLEPYTGYEIVVSGHTDDQPIRTQNFKSNWDLSSSRAIRFMD 210 Query: 298 -VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 +L S + +R S I G+ +R ++D + NRR+++ + + Sbjct: 211 VLLQNSKLKPERFSAI-GYGEYRPVASNDTTAGRAKNRRVEVSIIRK 256 >gi|307546933|ref|YP_003899412.1| flagellar motor protein MotB [Halomonas elongata DSM 2581] gi|307218957|emb|CBV44227.1| flagellar motor protein MotB [Halomonas elongata DSM 2581] Length = 317 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 3/194 (1%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL-SGLV 207 DS + + E L + + ++++ +DL ++I + + Sbjct: 73 GDSVSMSETVIPGGGPDPVYTEGERARVDLRQRSRPSERQRRAFRDLQRRIEMAIDADPD 132 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + + F+ T G+ I ++D PMF+ S P +L+ + +L +S Sbjct: 133 LKQLRDQLRFDMTPEGLRIQLVDTEQRPMFELGSDRVAPYMRDLLRLMAPLLNELPNDLS 192 Query: 268 IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 I GHTD+ + N NW LS RA ++ + L+ G+ ++ +++GFA + ++ Sbjct: 193 ISGHTDSLAYLNGFQGYGNWELSSARANASRRELVAGGLDSAKLLRVAGFADQVVMPDTE 252 Query: 326 PMNSANRRIDILVE 339 P + NRRI++LV Sbjct: 253 PSDPVNRRIELLVL 266 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 49/140 (35%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 ++ GSWKI ADFMT LMA FLVMWI++ ++ + +YF+ + + Sbjct: 19 HRHHGGSWKIALADFMTALMALFLVMWILSTASRQEREGVAEYFSTPLVAAIAGGDSVSM 78 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 + + + + + ++ + + ++ Sbjct: 79 SETVIPGGGPDPVYTEGERARVDLRQRSRPSERQRRAFRDLQRRIEMAIDADPDLKQLRD 138 Query: 146 SLTRDSEKGKDLCKSTDLEK 165 L D + D E+ Sbjct: 139 QLRFDMTPEGLRIQLVDTEQ 158 >gi|330808241|ref|YP_004352703.1| flagellar motor protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376349|gb|AEA67699.1| flagellar motor protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 294 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 10/194 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 DS++ D + + L+ +A IS+ L++ Sbjct: 58 DSDRALKPIPIGDERPKTTTPAKPLVKDSEQVDAGIAGGSDPLKSIADDISAAFGDLISS 117 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 N + + I + ++ +F ++P ++ K+ +L I + Sbjct: 118 N---QMTVRGNELWVEIELN---SSLLFGSGDAMPSDMAFNIIDKVAAILKPFDNPIHVE 171 Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327 G TD P R NW LS R+ S ++L GV+ R++ + G+ + + Sbjct: 172 GFTDDQPIRTAQYPTNWELSSARSASIVRMLAMQGVNPGRLASV-GYGEFQPVANNATAE 230 Query: 328 -NSANRRIDILVED 340 + NRR+ ++V Sbjct: 231 GRARNRRVVLVVSR 244 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 7/118 (5%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K I + + A Sbjct: 3 RRRHTEEHVNHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKVISEALIGVFTDSDRA 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 K P + + + + K+S + G + + ++I Sbjct: 63 LK-------PIPIGDERPKTTTPAKPLVKDSEQVDAGIAGGSDPLKSIADDISAAFGD 113 >gi|158327337|emb|CAM82843.1| flagellar motor protein MotB [Yersinia enterocolitica W22703] Length = 302 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 116/329 (35%), Gaps = 61/329 (18%) Query: 13 QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72 Q I+K+ + + G+WK+ +ADF +MA F+V+WI+ ++ ++ I N Sbjct: 9 QTTIVKRAARKKHSGGHSGAWKVAFADFTLAMMALFMVLWIVGVVSEEERQEIVAQLNGK 68 Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 + I + + +D TK+++ +++ Sbjct: 69 TIFAQQSFISIPSKSKSGGGKFSDSVDGHEQAKETKSNLAVEVPEP-------------- 114 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 E S E + + + T + + + +P + I K + Sbjct: 115 ---EQSLEELVDRSGREMEELTRIITQITSAYDAQSNLKMEVVPQGLRILIQDDKHRDMF 171 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 Q + ++ S L+A+ F I+I + VL Sbjct: 172 QRSSAVLTPFFSRLLAELAP---AFNEMDNKIII------------TGHTDASRYRDQVL 216 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 ++ G +RA A++ L+K G+ +DR+ +I Sbjct: 217 ----------YNNWNLSG-------------------ERALMAHKALVKGGLDDDRVLQI 247 Query: 313 SGFAHHRLKIASDPMNSANRRIDILVEDR 341 + A L +++P+ + NRRI+I+V + Sbjct: 248 NAMAEQMLLDSAEPLAAKNRRIEIMVLTK 276 >gi|49079216|gb|AAT49867.1| PA1041 [synthetic construct] Length = 211 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 8/111 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F SS L I E L ++ +SI GHTD+ N +LS RA + Sbjct: 105 FAFDSSKVDAADSEKLNGIAERLKGEAASTRLSITGHTDSV---GSDAYNQKLSERRANA 161 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 L+ +GV I + G + + + NRR++IL++ R+G Sbjct: 162 VANYLIDAGVPSSIIVGVQGLGESQPVADNKTREGRAENRRVEILIK-REG 211 >gi|206602390|gb|EDZ38871.1| Putative OmpA family protein [Leptospirillum sp. Group II '5-way CG'] Length = 265 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 83/238 (34%), Gaps = 8/238 (3%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 D K+ S Q + N+ + Q ++ K Sbjct: 27 PPHDSKLDSAQMSLQNALNDENLKQAAPEQLNKASDALKHASELLKNGAPKKDVDHYVYL 86 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + + ++ K K+ +I + + + + +L + + Sbjct: 87 ATQRIKIAEQKEKAAELQKEIKKASAHRDQIMLEANQAKIERLKRELLKMKAKETNR-GL 145 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRL 287 + +FD + + P + ++K+ E + + I G+TD++ A N +L Sbjct: 146 VLTLGNVLFDLNKADLKPGGMRTIKKLAEFMQSDPKRNVMIEGYTDST---GTAAYNEKL 202 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 SL RA S L+ G++ RI G+ ++ NRR++I++ D +G Sbjct: 203 SLKRAESVRDALVNDGINPQRIVT-KGYGPKYPIASNKTADGRQQNRRVEIVISDEKG 259 >gi|74095554|emb|CAJ27320.1| conserved hypothetical protein [Cronobacter sakazakii] Length = 444 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 7/137 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L A+ V + ++ + MF + PE I +++++ + Sbjct: 311 LKAEIARHWVSVDESQRESRVIFH---GDSMFAVGDASVRPERIDIIRRVAAEVQRVNGE 367 Query: 266 ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + I GHTD++P R N LS RA + + G++ ++I+ G + ++ Sbjct: 368 VVIIGHTDSTPIRSGAFASNQALSEKRAQAVAAYFREQGIAPEKITS-KGAGDTQPIASN 426 Query: 325 DPM--NSANRRIDILVE 339 S NRR++I V Sbjct: 427 HDAQGRSQNRRVEIFVT 443 >gi|170759482|ref|YP_001787603.1| chemotaxis MotB protein [Clostridium botulinum A3 str. Loch Maree] gi|169406471|gb|ACA54882.1| putative chemotaxis MotB protein [Clostridium botulinum A3 str. Loch Maree] Length = 254 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 76/205 (37%), Gaps = 11/205 (5%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + K S L++ + + +S ++ +++++ K+ Sbjct: 40 DTAKLQKASQEFNIIFKAGSNVLQEGGSGGASVGKSGVSIVPSDSVTEDIKMKEIKSKLE 99 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + V G+ I I D +F+ + L ++ +L +I ++L Sbjct: 100 KEIEKS---GYFDKVKVGVDADGLEIDIQD---VVLFNSGDAEVLKQSSALLTQISKMLK 153 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 I + GHTD P N R NW LS RA + L G+ +++ I + + Sbjct: 154 GLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPANKL-SIQAYGEY 212 Query: 319 RLKIASDPM--NSANRRIDILVEDR 341 K + + NRR++I + + Sbjct: 213 MPKFDNATEAGRAKNRRVEISIVRK 237 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 49/121 (40%), Gaps = 3/121 (2%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W I Y+D +T+L+A F+VM+ ++ D + Q FN K Sbjct: 2 KKRESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKA---G 58 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S + + + ++ + + + +T++ +I S +K+ + + + Sbjct: 59 SNVLQEGGSGGASVGKSGVSIVPSDSVTEDIKMKEIKSKLEKEIEKSGYFDKVKVGVDAD 118 Query: 140 S 140 Sbjct: 119 G 119 >gi|120437856|ref|YP_863542.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] gi|117580006|emb|CAL68475.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] Length = 320 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 62/310 (20%), Positives = 120/310 (38%), Gaps = 15/310 (4%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 +T ++A ++M + +E + + +K + + + E + L Sbjct: 5 LTSVLALLVLM--SSCVSSKKYGELESKNANLQRENRSVAKELENYRKSSEDLDKELSGL 62 Query: 101 SID-EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 D E IT L T +K Y+ LE + L + + +NS G+ K Sbjct: 63 KTDYETITTERNQLMEKLTALEKNYESLEKSYDALEQNSSAAIAENSRQNRDLLGQLDEK 122 Query: 160 STDLEKSINKEE--NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 L + N+ E L S+ + + +S + + KG+ Sbjct: 123 EAALLQEKNRLEKLEKDLALRSQRINDLENVIAAKDAKMNALKNAVSNALTNFEGKGLSV 182 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASP 276 E + +S+ N +FD S E +Q++G VL + ++ I GHTD P Sbjct: 183 EQRDGKVYVSM---ENKLLFDSGSWAVNSEGRKAVQQLGTVLGQNPDIAVLIEGHTDNVP 239 Query: 277 FRNIA--RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SAN 331 + +DNW LS RA + Q+L ++ + ++ G + ++D + N Sbjct: 240 YGGSGQLKDNWDLSTKRATAIVQILRENSNIDPQSLTAA-GRGEYAPVGSNDTEAGKAKN 298 Query: 332 RRIDILVEDR 341 RRI++++ + Sbjct: 299 RRIEVILTPK 308 >gi|58038715|ref|YP_190679.1| hypothetical protein GOX0240 [Gluconobacter oxydans 621H] gi|58001129|gb|AAW60023.1| Flagellar motor protein [Gluconobacter oxydans 621H] Length = 333 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 105/349 (30%), Gaps = 39/349 (11%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYAD-FMTVLMAF------------FLVMWIINATDDDTK 62 + +++ + + Y D T+LM FL + + Sbjct: 1 MARRRRGSHNALDAWPG----YVDALSTLLMVVTFVLLVFVVGQQFL------SVSLSRR 50 Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + L D+ + D ++ +I + + Sbjct: 51 EHTLDALQKQLAELSHMLSMTEDKNKSLSSTVATLADEKQHNQAQLQTLSTQIAALTGQL 110 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 Q + ++ QQ+ + + E + L ++ K E ++ Sbjct: 111 QSKDQALASADDTSKQQNSKISDLQAQIEELTRQLQAISNALDIEKKAEQGKDAQIADLG 170 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + K+ S G + D + + + +F + S+ Sbjct: 171 SKLNLALADKVNQLKRYRSEFFGRLRDLLKDQKGVNVVGDRFVFQ-----SEILFPQGSA 225 Query: 243 IPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 PE + + ++ + GH D P + NW LS +RA + Sbjct: 226 DLTPEGRKEITTLAHTFKQVASTIPTDLPWILRVDGHADRQPIHSAFPSNWELSSERAIT 285 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 ++L+ GV + +GFA ++ A+ + NRRI+ + DR Sbjct: 286 VVKLLIAEGVDPHHL-AATGFADYQPLDAASTPAAYARNRRIEFRLTDR 333 >gi|89893041|ref|YP_516528.1| hypothetical protein DSY0295 [Desulfitobacterium hafniense Y51] gi|89332489|dbj|BAE82084.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 264 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 12/185 (6%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + S + + + D+ KI + +N+ + T Sbjct: 77 DNMGKNNDPVTTETDSLLAAARAREDRDMSDMKAKIDQYIKE---NNLSAQLETRITEEM 133 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 ++ISI D +FD S++ E + I ++L + GHTD P Sbjct: 134 LMISIRD---YALFDSGSALVKTEAQKLAYIISDILRQYPGYNVEVAGHTDNLPINTAEF 190 Query: 283 -DNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 NW LS R+ + + L G+ + R I G+ + + + NRR+++ + Sbjct: 191 PTNWDLSSRRSLNFMKYLLQSDGLDQSRFRSI-GYGEFQPIATNTTEEGRAKNRRVEVNI 249 Query: 339 EDRQG 343 G Sbjct: 250 LRNFG 254 >gi|121997146|ref|YP_001001933.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1] gi|121588551|gb|ABM61131.1| OmpA/MotB domain protein [Halorhodospira halophila SL1] Length = 246 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 70/187 (37%), Gaps = 7/187 (3%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + ++ E P + D A+ + + L + V Sbjct: 61 QEDTPQAAPTVVDLEGPAPTPEQEVHDDLPPADPEHTDTAEILEALQEALAEELAAGDVE 120 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 G+L+ +Q F S + VL ++ VLA + +I + GHTD P Sbjct: 121 LGEGEDGVLLRFPEQAA---FALGSKEISEPFVPVLDRVAGVLADTPGLIRVSGHTDDIP 177 Query: 277 FRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333 R+ N+ LS RA S +L +G++ +R+ G R ++ + NRR Sbjct: 178 IRSDRFRSNFELSTARAISVVHILKDAGITPERLIA-QGHGETRPLAPNETPEQRARNRR 236 Query: 334 IDILVED 340 +D+ + D Sbjct: 237 VDVHLVD 243 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 19/153 (12%), Positives = 46/153 (30%), Gaps = 6/153 (3%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + +W +AD M VL+ FF++++ ++ D++ + + + Sbjct: 2 RYRSKAAARGSPAWMTTFADLMAVLVVFFVMLYTMSTIDNERYQKLAESLRQVL------ 55 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + E P + ++ + DL + LE L+ Sbjct: 56 GPSVVQEDTPQAAPTVVDLEGPAPTPEQEVHDDLPPADPEHTDTAEILEALQEALAEELA 115 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + + D + ++ S E Sbjct: 116 AGDVELGEGEDGVLLRFPEQAAFALGSKEISEP 148 >gi|312131420|ref|YP_003998760.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132] gi|311907966|gb|ADQ18407.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132] Length = 532 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 97/249 (38%), Gaps = 13/249 (5%) Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ--QSEHCKNSLTRDSEKGK 155 DL+ + + + + +K++ Q + + + + K R + Sbjct: 292 EDLTQESTPNEGVLQATTLAEERKEEEQPIVPTKVAIISGKVTDLTTGKPIEVRIIYEDM 351 Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + + + S Y + ++ L ++K I T+ G + + + Sbjct: 352 EDGEELGVATSDPITGEYKIVLPYGKRYSIRPESDNLLGVSKSIDLTIPGQYKEITGQDL 411 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDA 274 + G I++ N F+ + + E+ + L ++ +L + + I ++GHTD Sbjct: 412 ETAPIKAGTAITL----NNVFFEFAKATLEKESFLELDRLIALLVKNPNMAIEVQGHTDN 467 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANR 332 N RLS RA + ++ G++ DRI+ +GF R +++ + NR Sbjct: 468 V---GSDNANMRLSQQRADAVKAYFVEKGIATDRITS-TGFGESRPVASNETTEGQAKNR 523 Query: 333 RIDILVEDR 341 R++ ++ + Sbjct: 524 RVEFVILRK 532 >gi|310659033|ref|YP_003936754.1| motility protein b [Clostridium sticklandii DSM 519] gi|308825811|emb|CBH21849.1| motility protein B [Clostridium sticklandii] Length = 216 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 11/177 (6%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 +N + +Q+ K + L + + + V G+L+ D Sbjct: 33 QNAPMLDSGLMDENTSSEVLEMQNFQKLEDTIQEYLDKNQLSESVTVLEEEAGLLLRFQD 92 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIAR-DNWR 286 +FD S+ PE++ ++ I ++L + ISI GHTD P + NW Sbjct: 93 N---ILFDSGSADLKPESLEIMSYIAQLLNAEDFKDKFISIEGHTDDVPMNSPRYPSNWE 149 Query: 287 LSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 LS+ R+ + + L++ + + RIS SG++ + +D + NRR+DIL+ Sbjct: 150 LSVGRSSNVVRFLVENNNMDPKRISA-SGYSEYHPVAQNDTAENRAKNRRVDILILK 205 >gi|260438796|ref|ZP_05792612.1| putative chemotaxis protein MotB [Butyrivibrio crossotus DSM 2876] gi|292808785|gb|EFF67990.1| putative chemotaxis protein MotB [Butyrivibrio crossotus DSM 2876] Length = 265 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 8/226 (3%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 ST +++Q + + + G S + Sbjct: 38 STIDAEKFQEVIASFSSSYSVLDGGSTGIDDGMLIASGASQLTQLSEYYSSMGASDDDSD 97 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 +K + K+ L+D + + L + + T+ + +++ + + Sbjct: 98 KSEIDKAQDLIGKEELKDSEQMGDKIENLLDKMGQSNNIEVQVTQHYVCLNM---KGALL 154 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFR-NIARDNWRLSLDRAYS 294 F+ +S+ + VL + +L +I I GHTD P +I N LS RA + Sbjct: 155 FNSASATLTSDAEKVLSDVAVILKMYEDNLIEIEGHTDNVPINWDIFTSNNVLSDYRALA 214 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + L+ G+S ++ SG + ++D + NRR++I + Sbjct: 215 VFDFLVDKGISPVKLKH-SGRGEYNPIASNDTAEGRAQNRRVEIKI 259 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 74/221 (33%), Gaps = 6/221 (2%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + +D P W ++D M +L+ FF++++ ++ D + + + F+ L Sbjct: 3 RKKNEDPPIKTDGWMNTFSDLMNLLLCFFVMLFSMSTIDAEKFQEVIASFSSSYSVLDGG 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S GI D +SQ + E+ + ++ + Q L + Q Sbjct: 63 STGIDDGMLIASGASQL---TQLSEYYSSMGASDDDSDKSEIDKAQDLIGKEELKDSEQM 119 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + +N L + + + T +N + S ++ L D+A + Sbjct: 120 GDKIENLLDKMGQSNNIEVQVTQHYVCLNMKGALLFNSASATLTSDAEKV--LSDVAVIL 177 Query: 200 SSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 L+ + V + D R +FD Sbjct: 178 KMYEDNLIEIEGHTDNVPINWDIFTSNNVLSDYRALAVFDF 218 >gi|296329053|ref|ZP_06871559.1| proteobacterial sortase system OmpA family protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153857|gb|EFG94669.1| proteobacterial sortase system OmpA family protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 208 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 10/146 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A ++I++ F S+ L I + L Sbjct: 70 DNQERELKAKLQGTQAQVRKDGNALVINL---PGGVTFASDSANITSGFYSALNGIAQSL 126 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + E I + G+TD + N LS RA + Q L+ GVS +RI +GF Sbjct: 127 NNYPETRIQVNGYTDNT---GKDAHNQELSQRRANAVAQYLIAQGVSSNRIVA-NGFGSS 182 Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342 ++ NRR++I + Q Sbjct: 183 NPIASNSTPEGRLQNRRVEIKILPAQ 208 >gi|56476024|ref|YP_157613.1| outer membrane lipoprotein [Aromatoleum aromaticum EbN1] gi|56312067|emb|CAI06712.1| outer membrane lipoprotein containing OmpA/MotB domain [Aromatoleum aromaticum EbN1] Length = 232 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 +++ + L GV + I + + FD + + P+ VL ++ Sbjct: 74 RQMDKQEAELREQMAGTGVEVQRQGDTIRLQAPENIT---FDTNRADIKPQFQPVLGQLA 130 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + + + I + GHTD+ A N LS +RA + L++ GV +R++ + G+ Sbjct: 131 QSIQQYPDTVIQVEGHTDSV---GSASYNQTLSENRAGAVRSYLIQRGVDANRLAAV-GY 186 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 R + + NRR+++L+ Sbjct: 187 GLTRPVADNSTAAGRAQNRRVEMLI 211 >gi|15596238|ref|NP_249732.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|116048969|ref|YP_792229.1| hypothetical protein PA14_50880 [Pseudomonas aeruginosa UCBPP-PA14] gi|152988234|ref|YP_001349691.1| hypothetical protein PSPA7_4338 [Pseudomonas aeruginosa PA7] gi|218892997|ref|YP_002441866.1| putative outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|254234177|ref|ZP_04927500.1| hypothetical protein PACG_00011 [Pseudomonas aeruginosa C3719] gi|254239398|ref|ZP_04932720.1| hypothetical protein PA2G_00011 [Pseudomonas aeruginosa 2192] gi|296390597|ref|ZP_06880072.1| putative outer membrane protein precursor [Pseudomonas aeruginosa PAb1] gi|313105992|ref|ZP_07792253.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] gi|9946954|gb|AAG04430.1|AE004536_9 probable outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|115584190|gb|ABJ10205.1| probable outer membrane protein precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|126166108|gb|EAZ51619.1| hypothetical protein PACG_00011 [Pseudomonas aeruginosa C3719] gi|126192776|gb|EAZ56839.1| hypothetical protein PA2G_00011 [Pseudomonas aeruginosa 2192] gi|150963392|gb|ABR85417.1| probable outer membrane protein [Pseudomonas aeruginosa PA7] gi|218773225|emb|CAW29037.1| probable outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|310878755|gb|EFQ37349.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] Length = 210 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F SS L I E L ++ +SI GHTD+ N +LS RA + Sbjct: 105 FAFDSSKVDAADSEKLNGIAERLKGEAASTRLSITGHTDSV---GSDAYNQKLSERRANA 161 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L+ +GV I + G + + + NRR++IL++ Sbjct: 162 VANYLIDAGVPSSIIVGVQGLGESQPVADNKTREGRAENRRVEILIKR 209 >gi|114327745|ref|YP_744902.1| hypothetical protein GbCGDNIH1_1081 [Granulibacter bethesdensis CGDNIH1] gi|114315919|gb|ABI61979.1| chemotaxis motB protein [Granulibacter bethesdensis CGDNIH1] Length = 350 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 110/351 (31%), Gaps = 32/351 (9%) Query: 18 KKKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFN 70 +++ + + Y D T+LM F++ + K+ N Sbjct: 5 RRRNTSGENLHVWPG----YVDALSTLLMVIIFVLLVFVLAQAFLSYTLAGKEHRLDELN 60 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + S + + + + + + ++K + Sbjct: 61 RQLAIISRQFALEQQHSTQLAHSLERLRNEAAGKEADMARLRTQTVVLAEQKSRLESQLA 120 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + K L + D ++I ++ L + + + + Sbjct: 121 GRDQDVKRAEAKLAELDQTIHSKDTALDRLRDDLEAIRRQLAAVQSALDASEKESQSKDR 180 Query: 191 RLQDLAKKISSTLSGLVAD---------NIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + DL +++ L+ V + ++ VL ++ ++ +F + Sbjct: 181 TIADLGMRLNVALAEKVEELKKYRSEFFGKLREVLAGRPGIQVVGDRFVFQSDVLFPSGN 240 Query: 242 SIPLPETIVVLQKIGEVLAH--------STEVISIRGHTDASP-FRNIARDNWRLSLDRA 292 + + ++ I L ++ + GH D NW LS RA Sbjct: 241 ADLTEQGRQQVKDIAAALIQLSKKFPPNVNWLLRVDGHADRQKMVNGKFASNWELSAQRA 300 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 + ++L++ GV + +S FA ++ D + NRRI++ + DR Sbjct: 301 INVARLLIEQGVPGNHVSA-DAFADYQPVSQGDSEADLAKNRRIELRLTDR 350 >gi|322806981|emb|CBZ04551.1| flagellar motor rotation protein MotB [Clostridium botulinum H04402 065] Length = 247 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ D + +N+ V + GI+I + D +F+ + P++ Sbjct: 88 RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306 ++ KI ++A + I GHTD P +N NW LS RA + + ++ + Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 R + G+ +R ++ + NRR++I++ ++ Sbjct: 205 ARFTAA-GYGEYRPIAQNNSDANRAKNRRVNIVIVSKE 241 >gi|87119461|ref|ZP_01075358.1| flagellar motor protein [Marinomonas sp. MED121] gi|86164937|gb|EAQ66205.1| flagellar motor protein [Marinomonas sp. MED121] Length = 281 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 10/185 (5%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 E + ++ + P + + K+ + +Q+L + I + L + + + Sbjct: 90 AEDEAFQELTPDRGSDPSPSPQQNIQTVVDKKLQVVQELNQMILTHLGEYQQNGL---IS 146 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 + I I + + +F E + VL I EVL + I + GHTD P Sbjct: 147 INESELWIEIEL---KAGLLFSSGEFELTNEAVAVLMSISEVLKRYSYPIVVEGHTDNLP 203 Query: 277 FRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 + NW+LS RA S L+ G++ ++ + G + + K+ ++D + NRR Sbjct: 204 VSSNKYTSNWQLSSARASSVVDELVNGGINP-QLIAVLGLSSEKPKVRNSNDFSRARNRR 262 Query: 334 IDILV 338 + + + Sbjct: 263 VTLKI 267 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 42/101 (41%), Gaps = 2/101 (1%) Query: 16 IIKKKVA--IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 I K++ +DT N W + YADF+T+L AFF+ ++ I+ + K + + Sbjct: 11 ISKRRRLGLRNDTNQNKQRWILSYADFITLLFAFFVALYSISLKNQGDSKLLTETLEGVM 70 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 + + + + I + ++ + + S + Sbjct: 71 QAVQLSVQPINIGKVTTGKAEDEAFQELTPDRGSDPSPSPQ 111 >gi|253990166|ref|YP_003041522.1| flagellar motor protein MotB [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781616|emb|CAQ84779.1| chemotaxis motb protein [Photorhabdus asymbiotica] Length = 327 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 3/165 (1%) Query: 181 EKILAMKRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 E + A +RL L +++ ++ + +L + G+ I IID+ N PMF Sbjct: 102 EVVEANDDARRLNRLREQLDQLIITDPRLKALRPHLLIDMMDEGLRIQIIDRENRPMFMI 161 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQ 297 S+ +L+ I +L IS+ GHTD + N NW LS DRA ++ + Sbjct: 162 GSAKVESYMSDILRAIAPILNDIPNKISLSGHTDDLKYANGERGYSNWELSADRANASRR 221 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 L+ G+ E++I ++ G A D + NRRI ILV ++Q Sbjct: 222 ELLIGGLDEEKILRVVGMASTVRLKQEDASSPVNRRISILVLNKQ 266 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 44/90 (48%) Query: 15 IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 +I K+ +D ++ GSWKI YADFMT +MAFFLVMW++ + I +YF + Sbjct: 8 VIKVKRRKRNDIKHHGGSWKIAYADFMTAMMAFFLVMWLLAISSPQELTRIAEYFRTPLQ 67 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDE 104 + + D NP + + D Sbjct: 68 VAINKGERSSDSSNPIPGGGLDVLYQEGDT 97 >gi|150024266|ref|YP_001295092.1| OmpA family outer membrane protein P60 [Flavobacterium psychrophilum JIP02/86] gi|113927364|emb|CAL07968.2| outer membrane protein A [Flavobacterium psychrophilum JIP02/86] gi|149770807|emb|CAL42272.1| Outer membrane protein OmpA family P60 [Flavobacterium psychrophilum JIP02/86] Length = 465 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 84/299 (28%), Gaps = 21/299 (7%) Query: 52 WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111 ++ T + + + +L G+ + + D Sbjct: 174 LSLSTTYKKSFETRAE-----LPSLFQHFAGLTFKFGGKDTDGDGIYDRDDACPEAAGLK 228 Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + ++ + C ++ D C ++N Sbjct: 229 QFQGCPDTDGDGIADKDDACPEAAGLAALNGCPDTDGDGIADKDDACPEVAGLAALNGCP 288 Query: 172 NYFLPPLSKEKILAMKRKKRLQ---------DLAKKISSTLSGLVADNIVKGVLFETTRT 222 + ++ K K D + V Sbjct: 289 DTDGDGVADMKDKCPKVAGPRDNGGCPWPDTDGDSVLDKDDKCPTVKGTVANNGCPEVSE 348 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIA 281 + + D T +FD + +T+ +L + +L SI G+TD Sbjct: 349 EAIKKLNDYAKTILFDNAKFTFQKQTLPILDAMVAILNEFPTSKFSIEGNTDN---SGKK 405 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 N LS +RA + L+ G+S DR++ I G+ ++ + NRR+++ V Sbjct: 406 ATNQTLSENRAKAVADFLISKGISSDRLTSI-GYGDSMPIASNKTKAGKAQNRRVEVKV 463 >gi|262274025|ref|ZP_06051837.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP 101886] gi|262221835|gb|EEY73148.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP 101886] Length = 208 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 10/149 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + + + G+ I + + F + S P L + Sbjct: 66 QYMDRQEAAFREELAGSGIEVVREGDNIRLVMPSNIT---FGTNQSGISPGFYQSLDAVA 122 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 V+ +SI GHTD++ A N LS RA S L++S V+ R+ ++G+ Sbjct: 123 RVMNEYDKTFLSIEGHTDST---GDAAYNMTLSEKRAESVKSYLLRSAVNAKRLY-VTGY 178 Query: 316 AHHRLKIASD--PMNSANRRIDILVEDRQ 342 + ++D + NRR++I + Q Sbjct: 179 GETQPIASNDTSTGRAQNRRVEIQIVPNQ 207 >gi|161504516|ref|YP_001571628.1| hypothetical protein SARI_02629 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865863|gb|ABX22486.1| hypothetical protein SARI_02629 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 559 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 74/265 (27%), Gaps = 6/265 (2%) Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 ++ P +S+ + + G ++ + Sbjct: 269 WLYTRTCLQFSRKPGQSAPASLFPDAVLPLLAPFASTVQGGQRTRRLILLMWLCALTALG 328 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + ++ + D + + + + + L Sbjct: 329 ISALNNRDLIRQVSTDLQRWNAIPMDHYRPKAESLAALKQDALLLERWQRQGEPLRYSLG 388 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 L + I + I+ + +FD S+ P + +L Sbjct: 389 YYPGQRLWLALQQAIDTWTPPPAPEPKPVPKIVRLDSMSLFDSGKSVLKPGSTKMLVNSL 448 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + I + GHTD + + N LSL RA + + +G + + G+ Sbjct: 449 LGIKARPGWLIVVSGHTDNT---GSVQLNQTLSLQRAEAVRNWMRDTGDVPESCFAVQGY 505 Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338 R ++D + NRR++I + Sbjct: 506 GDSRPIASNDTPDGRAHNRRVEISL 530 >gi|77165507|ref|YP_344032.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707] gi|76883821|gb|ABA58502.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707] Length = 286 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 94/279 (33%), Gaps = 23/279 (8%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + +F+ F D + Q + D ++ ++ + K ++ Sbjct: 16 VLGFFSVFLVAACAPPTKPVDLERADAAIEQAQADSNVAQYAPVRLDEAK---EALQRAQ 72 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 E + + + D +++ + + + E Sbjct: 73 VAWEEDESVEEVEHLAYLAQQRAAIAEVAAADKAAQAEIKNLGQERQQMLMDVHELEARQ 132 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 A ++ K + A K+ L+ L A+ +G + +F+ S+ Sbjct: 133 AKEQAKMAEIRADKLEKRLAELNAEKTERGYVLT-------------LGDILFEVDSAEL 179 Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + L ++ L + + + GHTD++ A N LS RA S Y L+ +G Sbjct: 180 TSGGMQNLFRLVTFLKEYPDREVVVEGHTDST---GSAVYNMELSQRRADSVYLFLVNNG 236 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 ++ DRI G+ ++ NRR++I++ Sbjct: 237 IAPDRIVA-HGYGQGYPVAPNNTTAGRQKNRRVEIVILG 274 >gi|327187188|dbj|BAK08928.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor [Bacillus pseudofirmus] Length = 252 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 80/209 (38%), Gaps = 8/209 (3%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 Q + + + + + + E + F P + D+ Sbjct: 40 DAQKFRAISESFQQRQVFEFFPSAIEFENPSEEFGEEFPNPFDEGGFSEEGSNTDEVDMD 99 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + + + G+++ + ++ +F+ + + L L+K+G Sbjct: 100 ELLEEVQEFLEVNEMNDVISATRDDRGVVLVLQERT---LFETAEAELLDSAEPFLEKVG 156 Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314 +L+ ++ + GHTD+ P N NW LS RA S + L++ + + R +G Sbjct: 157 TLLSAIPNMVKVEGHTDSRPISNFRYPSNWELSGARASSVIRYLVETNDLDPKRFIA-TG 215 Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341 + R + + + NRR+ I++ D Sbjct: 216 YGDTRPVVPNTTVENLQLNRRVVIVISDP 244 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 50/157 (31%), Gaps = 3/157 (1%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K++ + W + ++D MT+++ FF++++ ++ D +AI + F Sbjct: 1 MKRRRRQQEK--GATKWMVTFSDMMTLILVFFILLFSMSVVDAQKFRAISESFQQRQVFE 58 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 S F+ + E + + S ++ ++ Q Sbjct: 59 FFPSAIEFENPSE-EFGEEFPNPFDEGGFSEEGSNTDEVDMDELLEEVQEFLEVNEMNDV 117 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + + + E+ +L S Sbjct: 118 ISATRDDRGVVLVLQERTLFETAEAELLDSAEPFLEK 154 >gi|254436394|ref|ZP_05049900.1| Thrombospondin type 3 repeat family [Nitrosococcus oceani AFC27] gi|207088084|gb|EDZ65357.1| Thrombospondin type 3 repeat family [Nitrosococcus oceani AFC27] Length = 344 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 90/304 (29%), Gaps = 28/304 (9%) Query: 57 TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116 + AI F P + T++ D + E G Sbjct: 39 MKNKKTMAIMAIFTPLLLAVYTSALAEDDHPLYAPYKGWPPCAVMTGEGDMAPDGRSVTG 98 Query: 117 ----------STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 +++ + + E + + L + D Sbjct: 99 VICRSTLFIPDSDKDGVPDDKDQCPNTPPGVEVDEVGCPLDSDNDGVPDYLDQCPDTPMG 158 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + E+ + + + + +++S L D+ GV + Sbjct: 159 VEVGEDGCPLDSDGDGVPDYLDQCPDTPMGVEVNSQGCPLSVDSDGDGVPDDIDECPDTA 218 Query: 227 SIIDQRNTPM-----------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 +D F S+ P +L K+ E + + I+I GHTD+ Sbjct: 219 YGVDVDEVGCPKPVVLEDGVHFGFDSAKLSPNAHTILDKVVENMRTYPDLEITIAGHTDS 278 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332 + A N RLS RA +A L G+ R+ I G+ R ++ + NR Sbjct: 279 T---GNADYNQRLSQLRAEAAMNYLASKGIDPSRMEAI-GYGEERPIASNSTKEGRAKNR 334 Query: 333 RIDI 336 R+++ Sbjct: 335 RVEL 338 >gi|163858421|ref|YP_001632719.1| hypothetical protein Bpet4103 [Bordetella petrii DSM 12804] gi|163262149|emb|CAP44451.1| OmpA-family protein [Bordetella petrii] Length = 427 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 4/111 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290 R +F+ S+ + + VL ++ + L + I +RG+TD P R NW LS Sbjct: 303 RGDGLFESGSAEVREQYLPVLSRVADALRETQGNILVRGYTDNIPMRGARYPSNWHLSQA 362 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 RA + ++L + R+ + G +D S NRR++I + Sbjct: 363 RADAVKELLEARLDNPQRV-RAEGRGDADPVAPNDTAAGRSRNRRVEITLM 412 >gi|288553786|ref|YP_003425721.1| flagellar motor protein MotS [Bacillus pseudofirmus OF4] gi|34485061|gb|AAB94398.2| channel protein [Bacillus pseudofirmus OF4] gi|288544946|gb|ADC48829.1| Flagellar motor rotation protein motS [Bacillus pseudofirmus OF4] gi|327187185|dbj|BAK08926.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor [Bacillus pseudofirmus] Length = 252 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 80/209 (38%), Gaps = 8/209 (3%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 Q + + + + + + E + F P + D+ Sbjct: 40 DAQKFRAISESFQQRQVFEFFPSAIEFENPSEEFGEEFPNPFDEGGFSEEGSNTDEVDMD 99 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + + + G+++ + ++ +F+ + + L L+K+G Sbjct: 100 ELLEEVQEFLEVNEMNDVISATRDDRGVVLVLQERT---LFETAEAELLDSAEPFLEKVG 156 Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314 +L+ ++ + GHTD+ P N NW LS RA S + L++ + + R +G Sbjct: 157 TLLSAIPNMVKVEGHTDSRPISNFRYPSNWELSGARASSVIRYLVETNDLDPKRFIA-TG 215 Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341 + R + + + NRR+ I++ D Sbjct: 216 YGDTRPVVPNTTVENLQLNRRVVIVISDP 244 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 50/157 (31%), Gaps = 3/157 (1%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K++ + W + ++D MT+++ FF++++ ++ D +AI + F Sbjct: 1 MKRRRRQQEK--GAPKWMVTFSDMMTLILVFFILLFSMSVVDAQKFRAISESFQQRQVFE 58 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 S F+ + E + + S ++ ++ Q Sbjct: 59 FFPSAIEFENPSE-EFGEEFPNPFDEGGFSEEGSNTDEVDMDELLEEVQEFLEVNEMNDV 117 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + + + E+ +L S Sbjct: 118 ISATRDDRGVVLVLQERTLFETAEAELLDSAEPFLEK 154 >gi|327187191|dbj|BAK08930.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor [Bacillus pseudofirmus] Length = 252 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 80/209 (38%), Gaps = 8/209 (3%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 Q + + + + + + E + F P + D+ Sbjct: 40 DAQKFRAISESFQQRQVFEFFPSAIEFENPSEEFGEEFPNPFDEGGFSEEGSNTDEVDMD 99 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + + + G+++ + ++ +F+ + + L L+K+G Sbjct: 100 ELLEEVQEFLEVNEMNDVISATRDDRGVVLVLQERT---LFETAEAELLDSAEPFLEKVG 156 Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314 +L+ ++ + GHTD+ P N NW LS RA S + L++ + + R +G Sbjct: 157 TLLSAIPNMVKVEGHTDSRPISNFRYPSNWELSGARASSVIRYLVETNDLDPKRFIA-TG 215 Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341 + R + + + NRR+ I++ D Sbjct: 216 YGDTRPVVPNTTVENLQLNRRVVIVISDP 244 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 50/157 (31%), Gaps = 3/157 (1%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K++ + W + ++D MT+++ FF++++ ++ D +AI + F Sbjct: 1 MKRRRRQQEK--GASKWMVTFSDMMTLILVFFILLFSMSVVDAQKFRAISESFQQRQVFE 58 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 S F+ + E + + S ++ ++ Q Sbjct: 59 FFPSAIEFENPSE-EFGEEFPNPFDEGGFSEEGSNTDEVDMDELLEEVQEFLEVNEMNDV 117 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + + + E+ +L S Sbjct: 118 ISATRDDRGVVLVLQERTLFETAEAELLDSAEPFLEK 154 >gi|254433641|ref|ZP_05047149.1| OmpA family protein [Nitrosococcus oceani AFC27] gi|207089974|gb|EDZ67245.1| OmpA family protein [Nitrosococcus oceani AFC27] Length = 293 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 94/279 (33%), Gaps = 23/279 (8%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + +F+ F D + Q + D ++ ++ + K ++ Sbjct: 23 VLGFFSVFLVAACAPPTKPVDLERADAAIEQAQADSNVAQYAPVRLDEAK---EALQRAQ 79 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 E + + + D +++ + + + E Sbjct: 80 VAWEEDESVEEVEHLAYLAQQRAAIAEVAAADKAAQAEIKNLGQERQQMLMDVHELEARQ 139 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 A ++ K + A K+ L+ L A+ +G + +F+ S+ Sbjct: 140 AKEQAKMAEIRADKLEKRLAELNAEKTERGYVLT-------------LGDILFEVDSAEL 186 Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + L ++ L + + + GHTD++ A N LS RA S Y L+ +G Sbjct: 187 TSGGMQNLFRLVTFLKEYPDREVVVEGHTDST---GSAVYNMELSQRRADSVYLFLVNNG 243 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 ++ DRI G+ ++ NRR++I++ Sbjct: 244 IAPDRIVA-HGYGQGYPVAPNNTTAGRQKNRRVEIVILG 281 >gi|308273452|emb|CBX30054.1| hypothetical protein N47_D28630 [uncultured Desulfobacterium sp.] Length = 307 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 2/174 (1%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGIL 225 ++++ LP + L+ A+KI+ T+S + + T+ G+ Sbjct: 77 PDEQKPLSLPASPIAVDKRAFEMELLKSEAEKITKTISQTPEFNKFKDKITVTVTQEGMR 136 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDN 284 I ++++ FD P+T+ +LQ I + LA I I G+TDA P+ + N Sbjct: 137 IDLLEESEGLFFDIGKIHIKPDTVKLLQVIAKSHLAKLKNGIIIEGYTDARPYVSSDYTN 196 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 W LS +RA SA +VL +SG+ +D+I ++ GFA +L++ PM+ +NRR+ IL+ Sbjct: 197 WELSTERANSARKVLEESGLRKDQILEVRGFADRKLRLPDKPMDFSNRRVSILL 250 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 5/134 (3%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 + E+ Q II+ K ++ G+WK+ YADF+T +MA F+V+WI+ + + I Sbjct: 2 DDEHIQPIIVV-KKVKGHGGHHGGAWKVAYADFVTAMMALFIVLWIVGQSKEVK-HYIGA 59 Query: 68 YFNPFGKNLMTASKGIFDEQNPP---ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 YFN G G+ ++ P S + + + K+ + + +Q ++ Sbjct: 60 YFNDPGVFTNGRYGGVLPDEQKPLSLPASPIAVDKRAFEMELLKSEAEKITKTISQTPEF 119 Query: 125 QRLENNIFYLSNSQ 138 + ++ I + Sbjct: 120 NKFKDKITVTVTQE 133 >gi|238795043|ref|ZP_04638637.1| hypothetical protein yinte0001_4570 [Yersinia intermedia ATCC 29909] gi|238725644|gb|EEQ17204.1| hypothetical protein yinte0001_4570 [Yersinia intermedia ATCC 29909] Length = 388 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 8/223 (3%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK-----EK 182 + S Q ++ + T KS+ I + + + + Sbjct: 36 MWLLSVSSPQQLTQIAEYFRTPLKVALTSGDKSSSSSSPIPGGGDDPTQQVGEVRKHIDS 95 Query: 183 ILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + K + RL L +K+ + + +L G+ I IID +N PMF S Sbjct: 96 EESRKEEYRLNKLREKLDQLIESDPRLRALRPHLLINMMEEGLRIQIIDSQNRPMFKMGS 155 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299 + P +L+ I +L IS+ GHTD P+ N NW LS DRA ++ + L Sbjct: 156 AQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYANGERGYSNWELSADRANASRREL 215 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + G+ E ++ ++ G A + NRRI ILV ++Q Sbjct: 216 LVGGLDEGKVLRVVGMASTMRLKEQPGDDPVNRRISILVLNKQ 258 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 48/102 (47%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 +++K+ A ++ GSWKI YADFMT +MAFFLVMW+++ + I +YF K Sbjct: 1 MVRKRKAKHGGGHHGGSWKIAYADFMTAMMAFFLVMWLLSVSSPQQLTQIAEYFRTPLKV 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 +T+ +P + + +S + + Sbjct: 61 ALTSGDKSSSSSSPIPGGGDDPTQQVGEVRKHIDSEESRKEE 102 >gi|163754618|ref|ZP_02161740.1| phosphoglycerate kinase [Kordia algicida OT-1] gi|161325559|gb|EDP96886.1| phosphoglycerate kinase [Kordia algicida OT-1] Length = 457 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 80/286 (27%), Gaps = 21/286 (7%) Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 F + GI + + D K + + Sbjct: 175 SFEDYLAPHFQHMAGIAIKFGGKDTDEDGIYDKDDACPDVKGLPEFNGCPDTDGDGIEDS 234 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL-AM 186 +++ + C ++ KD C ++N + ++ K Sbjct: 235 KDDCPDTAGLAALNGCPDTDGDGIADAKDDCPEVAGTAAMNGCPDADGDGITDAKDNCPN 294 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVK-----------GVLFETTRTGILISIIDQRNTP 235 + G++ + + + + T Sbjct: 295 EAGPSANKGCPWTDKDGDGVLDKDDRCPEVAGVAENDGCPPIPRMTEIEITELDNLARTV 354 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ ET +L KI E++ E +I GHTD+ N +LS RA + Sbjct: 355 YFNSGKDSFKQETYEILNKIVELIKGFPAEEFTIGGHTDSV---GSDSLNQKLSEKRANA 411 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 L ++ + I G+ + ++ + NRR++I + Sbjct: 412 VKSYLESK--LSNKFTAI-GYGENEPIASNRTRKGRAQNRRVEIKL 454 >gi|347153|gb|AAC36899.1| protein F [Pseudomonas fluorescens] Length = 317 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P + ++ + + +A + + GHTD+ N +LS RA + Sbjct: 218 FDFDKSVVKPNSYGDVKNLADFMAQYPDTNVEVAGHTDSV---GPDAYNQKLSQRRADAV 274 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 QVL+K GV+ RI+ + G+ R + NRR++ Sbjct: 275 KQVLVKDGVAPSRITSV-GYGESRPVADNATEAGRAVNRRVE 315 >gi|92113628|ref|YP_573556.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043] gi|91796718|gb|ABE58857.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043] Length = 283 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 82/247 (33%), Gaps = 7/247 (2%) Query: 99 DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158 D+ + G+ + + + + + + S+K Sbjct: 36 DMLTLLITLFVLLLALTGNDDSAAEEALAFPVLGVPTLQASAWSPTFYVPPRSDKRYVPP 95 Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 + T + + + + + GV+ Sbjct: 96 RDTTFYTPPPMPPRPPRMIMVNPAPAEALVENAKAAVREPAGVRRLPNTLKPFIDGVVVT 155 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 + G+ I N +F S + E VL+++ + L I+I GHTD+ P Sbjct: 156 QSAQGLNFRI---ENHLLFSSSQADLTDEGRAVLRQLLDSLRAFDGEITIEGHTDSRPIA 212 Query: 279 NIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 NW LS RA + + L+ G+ + + + G+A R ++D NRR++ Sbjct: 213 TDRFPSNWELSTARATAVLRFLVGEGLDSEALRAV-GYADTRPLQSNDSAEGRAANRRVE 271 Query: 336 ILVEDRQ 342 +++ + + Sbjct: 272 LVLHEPE 278 >gi|298372337|ref|ZP_06982327.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275241|gb|EFI16792.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058] Length = 700 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 75/258 (29%), Gaps = 7/258 (2%) Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 D E + + + + + + C Sbjct: 438 PDTPQDIEVDNDGCPKDTDGDGVYDYLDLCPDTPEGISVDENGCPIDSDGDGVPDDKDQC 497 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 ++ K K +D + + ++ P ++ + D + Sbjct: 498 PDTPKGLPVDAKGCSKDSDGDGVPDYKDKCPNTPKEVRGLVDENGCPKDTDGDGILDYKD 557 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + + +L + FD + P + VL+ I +++ ++ Sbjct: 558 ECPTIKGVKENQGCPPIKKEVLKVFKQALHGIQFDTGKATIKPVSRGVLKLIVDIMRNNP 617 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I GHTD+ N LS RA + + L G+ + R+ G+ Sbjct: 618 DYNLIIAGHTDSQ---GNDALNMTLSEKRAAAVRKYLEDRGIDKRRLQS-KGYGETLPVA 673 Query: 323 ASDPM--NSANRRIDILV 338 + + NRR++ V Sbjct: 674 TNKTAKGRAQNRRVEFTV 691 >gi|289208253|ref|YP_003460319.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] gi|288943884|gb|ADC71583.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] Length = 272 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 76/203 (37%), Gaps = 7/203 (3%) Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 ++ S D + ++ L + + + D + ++ Sbjct: 69 DPRDDRPLASAAQPIQLAHPDRQALLDPLVAPLTGNLGDLEGRLHEPLPEVDDPDLEGTA 128 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 T + + + +GV + I D+ +F + PE ++L ++ +L Sbjct: 129 TTASRMREQAPQGVEVVEHPGRTELRIQDE---ILFASGQADLQPEGRMLLAQLEPLLDE 185 Query: 262 STEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 +I++ GHTD P NW LS RA + L+ G+ +R+ + G A + Sbjct: 186 HDGLITVEGHTDNIPIATERFPSNWELSSARASGVVRYLLDQGLEAERLRAV-GRADTQP 244 Query: 321 KIASDPMNSA--NRRIDILVEDR 341 ++D NRR+ +++E Sbjct: 245 VASNDTARGRSENRRVALILESP 267 Score = 36.1 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 48/159 (30%), Gaps = 11/159 (6%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 D + +W + Y D +T+++ F++M D + + P + Sbjct: 38 RQRDDEH---AWILTYLDVLTLVIVIFVIMLTF--MDPRDDRPLASAAQPIQLA-HPDRQ 91 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 + D P + ++ + E + + G+ + + + E Sbjct: 92 ALLDPLVAPLTGNLGDLEGRLHEPLPEVDDPDLEGTATTASRMRE-----QAPQGVEVVE 146 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 H + R ++ DL+ P L + Sbjct: 147 HPGRTELRIQDEILFASGQADLQPEGRMLLAQLEPLLDE 185 >gi|53804092|ref|YP_114257.1| OmpA domain-containing protein [Methylococcus capsulatus str. Bath] gi|53757853|gb|AAU92144.1| OmpA domain protein [Methylococcus capsulatus str. Bath] Length = 179 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 11/144 (7%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L + V + R + +++ D+ +F + E + KI L Sbjct: 32 RQLNEQLRTEVEADEVKIQQLRDRLRVTMEDEL---LFPEGGYQISKEGKASIDKIIPTL 88 Query: 260 AHSTEVI-SIRGHTDASPFRN----IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 +T + GHTD P NW LS RA + L G+ R++ G Sbjct: 89 QSATNHRIEVEGHTDNVPIGKHLAHRFSSNWELSAGRACEVVKYLQSKGIDPARMTAA-G 147 Query: 315 FAHHRLKIASDPMN--SANRRIDI 336 ++ ++ + NRRIDI Sbjct: 148 HGEYQPVASNATAEGKAQNRRIDI 171 >gi|213963452|ref|ZP_03391706.1| OmpA family protein [Capnocytophaga sputigena Capno] gi|213953860|gb|EEB65188.1| OmpA family protein [Capnocytophaga sputigena Capno] Length = 454 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 74/267 (27%), Gaps = 25/267 (9%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 + G + P+R + D +LK ++ Sbjct: 206 KDDACPDDPGKKELNGCPDRDNDGVADKDDACPDEAGLPELKGCPDRDGDGIADKDDACP 265 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + + C ++ D CK K N Sbjct: 266 DEAGKPEFNGCPDTDGDGVADNVDQCKDVAGPKENNGCPWPDTDGDG------------- 312 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + T +FD + + PE+ VL Sbjct: 313 -----VLDKDDECPEEAGPASNNGCPEVTQEVQTQLNSFAKTILFDVNKATIRPESATVL 367 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 I VL SI G+TD N +LS DRAYS L+ G+ + R++ Sbjct: 368 NNIVNVLNKYKNAKFSIEGYTDT---SGNKAKNQKLSEDRAYSVKAYLIDKGIDQARLTA 424 Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDI 336 GF + ++ NRR++I Sbjct: 425 -KGFGPEKPIASNKTKKGRELNRRVEI 450 >gi|309700460|emb|CBI99754.1| lateral flagellar motor protein B (MotB-like) [Escherichia coli ETEC H10407] Length = 296 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 56 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 115 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 116 ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 175 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N DNW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 176 PVFDSLDNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 235 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 236 DQMLLDSKNPQSAGNRRIEIMVLTK 260 >gi|153213818|ref|ZP_01949026.1| outer membrane protein OmpA [Vibrio cholerae 1587] gi|229524210|ref|ZP_04413615.1| outer membrane protein A precursor [Vibrio cholerae bv. albensis VL426] gi|124115742|gb|EAY34562.1| outer membrane protein OmpA [Vibrio cholerae 1587] gi|229337791|gb|EEO02808.1| outer membrane protein A precursor [Vibrio cholerae bv. albensis VL426] Length = 321 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +S+ P T+ L KI L + + + GHTD++ N +LS R Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERR 264 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + + L G+ RIS G ++ NRR+++++ Sbjct: 265 AQAVAKALEAQGIDASRISA-KGLGESSPIASNATAEGREKNRRVELVI 312 >gi|229513857|ref|ZP_04403319.1| outer membrane protein A precursor [Vibrio cholerae TMA 21] gi|262192122|ref|ZP_06050283.1| outer membrane protein A precursor [Vibrio cholerae CT 5369-93] gi|297580859|ref|ZP_06942784.1| outer membrane protein OmpA [Vibrio cholerae RC385] gi|229349038|gb|EEO13995.1| outer membrane protein A precursor [Vibrio cholerae TMA 21] gi|262031971|gb|EEY50548.1| outer membrane protein A precursor [Vibrio cholerae CT 5369-93] gi|297534685|gb|EFH73521.1| outer membrane protein OmpA [Vibrio cholerae RC385] Length = 321 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +S+ P T+ L KI L + + + GHTD++ N +LS R Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERR 264 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + + L G+ RIS G ++ NRR+++++ Sbjct: 265 AQAVAKALEAQGIDASRISA-KGLGESSPIASNATAEGREKNRRVELVI 312 >gi|261211335|ref|ZP_05925623.1| outer membrane protein A precursor [Vibrio sp. RC341] gi|260839290|gb|EEX65916.1| outer membrane protein A precursor [Vibrio sp. RC341] Length = 322 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +S+ P T+ L KI L + + + GHTD++ N +LS R Sbjct: 209 DSSTFATASAELKPATVKKLDKIVGYLNQYPQAKVEVVGHTDST---GSDAYNQKLSERR 265 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + + L G+ RIS G ++ NRR+++++ Sbjct: 266 AQAVAKALEAQGIDASRISA-KGLGESSPIASNTTAEGREKNRRVELVI 313 >gi|229528782|ref|ZP_04418172.1| outer membrane protein A precursor [Vibrio cholerae 12129(1)] gi|229332556|gb|EEN98042.1| outer membrane protein A precursor [Vibrio cholerae 12129(1)] gi|327484732|gb|AEA79139.1| Outer membrane protein A precursor [Vibrio cholerae LMA3894-4] Length = 321 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +S+ P T+ L KI L + + + GHTD++ N +LS R Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERR 264 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + + L G+ RIS G ++ NRR+++++ Sbjct: 265 AQAVAKALEAQGIDASRISA-KGLGESSPIASNATAEGREKNRRVELVI 312 >gi|254286478|ref|ZP_04961435.1| outer membrane protein OmpA [Vibrio cholerae AM-19226] gi|150423427|gb|EDN15371.1| outer membrane protein OmpA [Vibrio cholerae AM-19226] Length = 321 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +S+ P T+ L KI L + + + GHTD++ N +LS R Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERR 264 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + + L G+ RIS G ++ NRR+++++ Sbjct: 265 AQAVAKALEAQGIDASRISA-KGLGESSPIASNATAEGREKNRRVELVI 312 >gi|108759341|ref|YP_630319.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622] gi|108463221|gb|ABF88406.1| OmpA domain protein [Myxococcus xanthus DK 1622] Length = 639 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 77/276 (27%), Gaps = 11/276 (3%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P ++ D + D + K + + + Sbjct: 338 PDIRDRCPNEPEDIDGFQDGDGCPDPDNDGDGIPDGEDGCANEKGPKHTKGCPDPNYDTD 397 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + + + K + +D + ++ P Sbjct: 398 GDGVVDGEDACVDKPGPKSNKGCPEDENDADGDGIPDKLDKCPDKPGPKDYDGCPDTDGD 457 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + D + I I + +F+ S++ ++ Sbjct: 458 EVPDNEDDCPEQFGPPENNGCPYDSPPYVVVESDRIRI---KGNVLFETGSAVIQKQSYP 514 Query: 251 VLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L ++ VL + + I GHTD N LS RA S + L+ G++ R Sbjct: 515 LLDEVATVLRKNPTLGPVLIEGHTDNR---GSRALNMGLSDRRAKSVLEYLVAKGIARKR 571 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 +S GF +D + NRR+D + + Sbjct: 572 LSS-KGFGFDNPIATNDTALGRAKNRRVDFRLVRAE 606 >gi|312962248|ref|ZP_07776740.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6] gi|311283585|gb|EFQ62174.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6] Length = 295 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 73/203 (35%), Gaps = 10/203 (4%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + D+++ + + + L+ +A IS Sbjct: 50 SQALIGVFNDADRSLKPIPIGEERPRTVTPAKPLVNDSDETAAGVGGTSDPLKSIADDIS 109 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + L++ N + + I + ++ +F + ++P + ++ K+ +L Sbjct: 110 AAFGDLISSN---QMTVRGNELWVEIELN---SSLLFASADAMPSDQAFTIIDKVAAILK 163 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G TD P NW LS RA S ++L GVS R++ + G+ + Sbjct: 164 PFENPVHVEGFTDNVPISTAQYPTNWELSSARAASIVRMLAMQGVSPGRLASV-GYGEFQ 222 Query: 320 LKIASDP--MNSANRRIDILVED 340 + + NRR+ ++V Sbjct: 223 PVANNATVEGRARNRRVVLVVSR 245 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 7/119 (5%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N W + YADF+T+L AFF+VM+ I++ ++ K I Q + Sbjct: 3 RRRREPEEHVNHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALIGVFNDADR 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + K P + ++ + + +S + G + + ++I Sbjct: 63 SLK-------PIPIGEERPRTVTPAKPLVNDSDETAAGVGGTSDPLKSIADDISAAFGD 114 >gi|295095728|emb|CBK84818.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 568 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 6/114 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 I+ + +FD P + +L + I + GHTD++ + N Sbjct: 430 IVRLDSMSLFDTGKWALKPASTKLLVNSLVGIKAKPGWLIVVAGHTDST---GDDQSNQV 486 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 LSL RA S + +G + + G+ R +D NRR++I + Sbjct: 487 LSLKRAESVRDWMRDTGDVPESCFAVQGYGESRPVATNDTAEGRALNRRVEISL 540 >gi|153006608|ref|YP_001380933.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152030181|gb|ABS27949.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5] Length = 440 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 87/288 (30%), Gaps = 28/288 (9%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + + G + Q P + L D + + G ++ + + Sbjct: 153 DACPSQPGPRESQGCPVSKDSDSDALPDDIDRCPLDPEDRDGFQDEDGCPDADNDGDGVV 212 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + ++ KD + + + + + L+ +D Sbjct: 213 DKADACPLEPGAVEARGCPVKDRDGDGVSDPADSCPDVAGIKALAGCPDSDSDGIPDAED 272 Query: 195 LAKK-------------------ISSTLSGLVADNIVKGVLFETTRTGILISII--DQRN 233 + ++ + + T + + D + Sbjct: 273 KCPQQAGTKENGGCPDADTDGDALADRIDKCPTQFGPRPDGCPKKYTLVQVRREKIDIKQ 332 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRA 292 F + LP++ +L ++ +VL + I GHTD+ N RLS RA Sbjct: 333 QVHFATAKFRVLPDSFPLLNQVVQVLRDFPNMQISIEGHTDSV---GGEALNMRLSQQRA 389 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + L+ GVS +R+ I GF + ++ + NRR + + Sbjct: 390 EAVLDYLISKGVSPERLEAI-GFGPTKPIASNKTASGRARNRRTEFRI 436 >gi|310639572|ref|YP_003944330.1| ompa/motb domain-containing protein [Paenibacillus polymyxa SC2] gi|309244522|gb|ADO54089.1| OmpA/MotB domain-containing protein [Paenibacillus polymyxa SC2] Length = 275 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 41/325 (12%), Positives = 97/325 (29%), Gaps = 71/325 (21%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + SW + Y+D MT+L+A F+V++ +++ D + + Q + + Sbjct: 3 KKRHEPHEEHADESWLLPYSDLMTLLLALFIVLFGMSSLDAKKFETMAQSL----SSAFS 58 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 G+ D SSQ+ E +++ +++ +KQ + + Sbjct: 59 GGTGVLDHSA-ANPSSQSMDMGKNKEEVSQPLKSKATSTSDLQKQLAQ----REEEDLKK 113 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + + + K + I +N E ++ Sbjct: 114 LKKQMDQYIQNNGLSTLLNTKLNQSQLMITISDNALFSSGQAEVKPEARK---------- 163 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 ++ ++S ++ V+ + IS F + + ++ L Sbjct: 164 LAKSISSMLQQFPGYDVIVSGHTDNVPIS------NSQFPSNFDLSAKRSLNFL------ 211 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 +L+ + + I G+ + Sbjct: 212 -------------------------------------RILLLNPQLDPTKFVSI-GYGEY 233 Query: 319 RLKIASDP--MNSANRRIDILVEDR 341 R + + NRR++I V + Sbjct: 234 RPLAGNQTGAGRAKNRRVEISVLRK 258 >gi|104782795|ref|YP_609293.1| flagellar motor protein MotD [Pseudomonas entomophila L48] gi|95111782|emb|CAK16506.1| flagellar motor protein MotB [Pseudomonas entomophila L48] Length = 285 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 9/206 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +Q + D E+ D K + E+ A + L Sbjct: 46 KQISQALIGVFNDPERSMKPIPIGDERPLSVKPAEPLI--KDSEQTDAGLAQTSADPLKT 103 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + I + ++ +F + ++P +++K+ + Sbjct: 104 ITDDVHDAFGDLIKSNQMTVRGNELWVEIELN---SSLLFASADAMPSDVAFEIIEKVAK 160 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 +L + + G TD P R NW LS RA S ++L GV+ R++ + G+ Sbjct: 161 ILKPFANPVHVEGFTDNLPIRTAQYPTNWELSSARAASIVRLLAMEGVNPARMASV-GYG 219 Query: 317 HHRLKIASDPM--NSANRRIDILVED 340 ++ +D + NRR+ +++ Sbjct: 220 EYQPVAGNDTADGRARNRRVVLVISR 245 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 53/136 (38%), Gaps = 9/136 (6%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +++ + + W + YADF+T+L AFF+VM+ I++ ++ K I Q + Sbjct: 1 MARRRKTEEHENH--ERWLVSYADFITLLFAFFVVMYSISSINEGKYKQISQALIGVFND 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + K P + + + E + K+S G + + + + Sbjct: 59 PERSMK-------PIPIGDERPLSVKPAEPLIKDSEQTDAGLAQTSADPLKTITDDVHDA 111 Query: 136 NSQQSEHCKNSLTRDS 151 + + ++ + Sbjct: 112 FGDLIKSNQMTVRGNE 127 >gi|92114147|ref|YP_574075.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043] gi|91797237|gb|ABE59376.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043] Length = 330 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 79/218 (36%), Gaps = 2/218 (0%) Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 +N + ++ ++ D E + ++ + Sbjct: 49 PKNELDNIAEYFRTPLAVALTGGDKSTASTSAIPGGGADPTFSEGERRRLDIRQQSRPSD 108 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + ++ + + + + G+ I ++D PMF+ S+ P Sbjct: 109 EIRRLRALRERLEREVREDPNLRQMSSQLRTDFIPEGLRIQLVDTDKRPMFELGSARLAP 168 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGV 304 +LQ + L IS+ GHTD + NW LS DRA ++ + L+ +G+ Sbjct: 169 YMRDLLQALAPELNDVPNAISLTGHTDDLRYAGGEKGYSNWELSADRANASRRALVAAGL 228 Query: 305 SEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ ++SG + P ++ NRRI I+V + Sbjct: 229 DSSKLLRVSGMGARVNLEGTQPSDAVNRRISIVVLSER 266 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 58/163 (35%) Query: 27 PNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDE 86 ++ G+WKI YADFMT LMA FLV+WI++ + I +YF +T Sbjct: 18 GHHGGNWKIAYADFMTALMALFLVLWILSMVPKNELDNIAEYFRTPLAVALTGGDKSTAS 77 Query: 87 QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146 + + + + ++ + R + + Sbjct: 78 TSAIPGGGADPTFSEGERRRLDIRQQSRPSDEIRRLRALRERLEREVREDPNLRQMSSQL 137 Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 T +G + ++ + + + L P ++ + A+ + Sbjct: 138 RTDFIPEGLRIQLVDTDKRPMFELGSARLAPYMRDLLQALAPE 180 >gi|126665356|ref|ZP_01736338.1| flagellar motor protein MotB [Marinobacter sp. ELB17] gi|126629984|gb|EBA00600.1| flagellar motor protein MotB [Marinobacter sp. ELB17] Length = 313 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 112/321 (34%), Gaps = 57/321 (17%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 ++ + +W + +AD M++L++FF+++ + D K I + Sbjct: 5 PEEEKPGIPAWVVTFADLMSLLLSFFVLLLSFSEIDAQKFKQIAGELSAA---------- 54 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 F Q I ++ + + + + ++ + Sbjct: 55 -FGVQRDVPAVEVPMGTSIIFDNFSSAPAEPTVINEIKQTTTDQKPE------------- 100 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 D + + + K +++L+ L K + Sbjct: 101 ------------------VDTLRGAVDSAALAEATKAAKAAEQEKIQEQLEQLRKVLEPA 142 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L+ + + I+I + ++ F S+ E +L +I EVLA Sbjct: 143 LND-------GRIAVTQEQHRIVIRVEEK---GSFPSGSAKLTWEFESLLLEIAEVLASI 192 Query: 263 TEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRL 320 ++I GHTD P NW LS RA S L+ SG V DR+ + G A Sbjct: 193 PGELTIEGHTDNVPISTDRFYSNWDLSAARAASVANALLASGTVEPDRL-AVKGLADTAA 251 Query: 321 KIASDPM--NSANRRIDILVE 339 ++ +D + NRR++I+++ Sbjct: 252 RVDNDSAENRAKNRRVEIIID 272 >gi|300817251|ref|ZP_07097469.1| OmpA family protein [Escherichia coli MS 107-1] gi|307313501|ref|ZP_07593122.1| OmpA/MotB domain protein [Escherichia coli W] gi|300530227|gb|EFK51289.1| OmpA family protein [Escherichia coli MS 107-1] gi|306906669|gb|EFN37180.1| OmpA/MotB domain protein [Escherichia coli W] gi|323181565|gb|EFZ66985.1| lateral flagellar motor protein B [Escherichia coli 1357] gi|323379881|gb|ADX52149.1| OmpA/MotB domain protein [Escherichia coli KO11] Length = 307 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSITTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + +I L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L + +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 271 >gi|288550313|ref|ZP_05969946.2| membrane protein OmpA-family [Enterobacter cancerogenus ATCC 35316] gi|288315417|gb|EFC54355.1| membrane protein OmpA-family [Enterobacter cancerogenus ATCC 35316] Length = 563 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 55/147 (37%), Gaps = 9/147 (6%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L + + ++ + ++ + + I + + +FD P + +L Sbjct: 394 LIPPVEAAINDWTPPPPPRPIIKQIVQGPQTIRL---DSMSLFDTGRWALKPGSTKLLVN 450 Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + I + GHTD++ + N LSL RA S + +G + + Sbjct: 451 SLVGIKAKPGWLIVVAGHTDST---GDDKSNQVLSLKRAESVRDWMRDTGDVPESCFAVQ 507 Query: 314 GFAHHRLKIASDP--MNSANRRIDILV 338 G+ R +D + NRR++I + Sbjct: 508 GYGESRPVATNDTPEGRALNRRVEISL 534 >gi|15642211|ref|NP_231844.1| outer membrane protein OmpA [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586239|ref|ZP_01676029.1| outer membrane protein OmpA [Vibrio cholerae 2740-80] gi|121726579|ref|ZP_01679828.1| outer membrane protein OmpA [Vibrio cholerae V52] gi|147673624|ref|YP_001217730.1| outer membrane protein OmpA [Vibrio cholerae O395] gi|153817076|ref|ZP_01969743.1| outer membrane protein OmpA [Vibrio cholerae NCTC 8457] gi|153820798|ref|ZP_01973465.1| outer membrane protein OmpA [Vibrio cholerae B33] gi|153825329|ref|ZP_01977996.1| outer membrane protein OmpA [Vibrio cholerae MZO-2] gi|153829325|ref|ZP_01981992.1| outer membrane protein OmpA [Vibrio cholerae 623-39] gi|227082337|ref|YP_002810888.1| outer membrane protein OmpA [Vibrio cholerae M66-2] gi|229507710|ref|ZP_04397215.1| outer membrane protein A precursor [Vibrio cholerae BX 330286] gi|229512095|ref|ZP_04401574.1| outer membrane protein A precursor [Vibrio cholerae B33] gi|229519230|ref|ZP_04408673.1| outer membrane protein A precursor [Vibrio cholerae RC9] gi|229607214|ref|YP_002877862.1| outer membrane protein A precursor [Vibrio cholerae MJ-1236] gi|254225790|ref|ZP_04919395.1| outer membrane protein OmpA [Vibrio cholerae V51] gi|254849343|ref|ZP_05238693.1| outer membrane protein OmpA [Vibrio cholerae MO10] gi|255747088|ref|ZP_05421033.1| outer membrane protein A precursor [Vibrio cholera CIRS 101] gi|262161368|ref|ZP_06030478.1| outer membrane protein A precursor [Vibrio cholerae INDRE 91/1] gi|262167761|ref|ZP_06035463.1| outer membrane protein A precursor [Vibrio cholerae RC27] gi|298500409|ref|ZP_07010214.1| outer membrane protein OmpA [Vibrio cholerae MAK 757] gi|2641145|gb|AAB86826.1| putative outer membrane porin [Vibrio cholerae O395] gi|9656770|gb|AAF95357.1| outer membrane protein OmpA [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549505|gb|EAX59531.1| outer membrane protein OmpA [Vibrio cholerae 2740-80] gi|121631032|gb|EAX63411.1| outer membrane protein OmpA [Vibrio cholerae V52] gi|125621696|gb|EAZ50025.1| outer membrane protein OmpA [Vibrio cholerae V51] gi|126512344|gb|EAZ74938.1| outer membrane protein OmpA [Vibrio cholerae NCTC 8457] gi|126521590|gb|EAZ78813.1| outer membrane protein OmpA [Vibrio cholerae B33] gi|146315507|gb|ABQ20046.1| outer membrane protein OmpA [Vibrio cholerae O395] gi|148875166|gb|EDL73301.1| outer membrane protein OmpA [Vibrio cholerae 623-39] gi|149741013|gb|EDM55082.1| outer membrane protein OmpA [Vibrio cholerae MZO-2] gi|227010225|gb|ACP06437.1| outer membrane protein OmpA [Vibrio cholerae M66-2] gi|227014109|gb|ACP10319.1| outer membrane protein OmpA [Vibrio cholerae O395] gi|229343919|gb|EEO08894.1| outer membrane protein A precursor [Vibrio cholerae RC9] gi|229352060|gb|EEO17001.1| outer membrane protein A precursor [Vibrio cholerae B33] gi|229355215|gb|EEO20136.1| outer membrane protein A precursor [Vibrio cholerae BX 330286] gi|229369869|gb|ACQ60292.1| outer membrane protein A precursor [Vibrio cholerae MJ-1236] gi|254845048|gb|EET23462.1| outer membrane protein OmpA [Vibrio cholerae MO10] gi|255735490|gb|EET90890.1| outer membrane protein A precursor [Vibrio cholera CIRS 101] gi|262023826|gb|EEY42525.1| outer membrane protein A precursor [Vibrio cholerae RC27] gi|262028679|gb|EEY47333.1| outer membrane protein A precursor [Vibrio cholerae INDRE 91/1] gi|297541102|gb|EFH77156.1| outer membrane protein OmpA [Vibrio cholerae MAK 757] Length = 321 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +S+ P T+ L KI L + + + GHTD++ N +LS R Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERR 264 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + + L G+ RIS G ++ NRR+++++ Sbjct: 265 AQAVAKALEAQGIDASRISA-KGLGESSPIASNATAEGREKNRRVELVI 312 >gi|284924249|emb|CBG37350.1| putative type VI secretion protein [Escherichia coli 042] Length = 576 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 6/107 (5%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAY 293 +FD P L + I + GHTD + N LSL RA Sbjct: 447 ALFDAGKWTLKPGATKWLVNALVDIKAKAGWLIVVSGHTDNT---GDPLRNQALSLKRAE 503 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + + +G + G+ R +D + NRR++I + Sbjct: 504 AVRDWMRDTGDIPQSCFAVQGYGESRPVAPNDTAEGRARNRRVEISL 550 >gi|218696635|ref|YP_002404302.1| hypothetical protein EC55989_3336 [Escherichia coli 55989] gi|218353367|emb|CAU99387.1| conserved hypothetical protein; putative membrane protein [Escherichia coli 55989] Length = 608 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 6/107 (5%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAY 293 +FD P L + I + GHTD + N LSL RA Sbjct: 479 ALFDAGKWTLKPGATKWLVNALVDIKAKAGWLIVVSGHTDNT---GDPLRNQALSLKRAE 535 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + + +G + G+ R +D + NRR++I + Sbjct: 536 AVRDWMRDTGDIPQSCFAVQGYGESRPVAPNDTAEGRARNRRVEISL 582 >gi|187779120|ref|ZP_02995593.1| hypothetical protein CLOSPO_02715 [Clostridium sporogenes ATCC 15579] gi|187772745|gb|EDU36547.1| hypothetical protein CLOSPO_02715 [Clostridium sporogenes ATCC 15579] Length = 254 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 74/205 (36%), Gaps = 11/205 (5%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + K S +++ + +S ++ +++++ + Sbjct: 40 DTAKLQKASQEFNIIFKAGSNVVQEGGGGGASVGKAGVSIVPSDSVTEDIKMKEIKSNLE 99 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + V G+ I I D +F+ + L ++ +L +I ++L Sbjct: 100 KEIKKS---GYSDKVKVGVDADGLEIDIQD---VVLFNSGDAEVLKQSSALLTQISKMLK 153 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 I I GHTD P N R NW LS RA + L G+ +++ I + + Sbjct: 154 GLDNNIKITGHTDNKPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPANKL-SIQAYGEY 212 Query: 319 RLKIASDPM--NSANRRIDILVEDR 341 K + + NRR++I + + Sbjct: 213 MPKFDNATEVGRAKNRRVEIAIVRK 237 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 48/121 (39%), Gaps = 3/121 (2%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W I Y+D +T+L+A F+VM+ ++ D + Q FN K Sbjct: 2 KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKA---G 58 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S + + + + + + +T++ +I S +K+ + ++ + Sbjct: 59 SNVVQEGGGGGASVGKAGVSIVPSDSVTEDIKMKEIKSNLEKEIKKSGYSDKVKVGVDAD 118 Query: 140 S 140 Sbjct: 119 G 119 >gi|159185884|ref|NP_356875.2| hypothetical protein Atu3746 [Agrobacterium tumefaciens str. C58] gi|159141018|gb|AAK89660.2| flagellar motor protein [Agrobacterium tumefaciens str. C58] Length = 261 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 82/251 (32%), Gaps = 15/251 (5%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 ++ + + + + +Q + + + + + Sbjct: 12 ENERSRLQSLLDAGSGNNASANARIGSLTGELDEQRQANSRASAQIELLNQQIAALRAQI 71 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 S+ + ++ +RL + L+ +D + + R I Sbjct: 72 ASVEAALQASEAKDTSSQVKIADLGRRLNVALAQRVQELNRYRSDFFGRLREILSDRENI 131 Query: 225 LI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDA 274 I ++ +F + PE + K+ L A V+ + GHTD Sbjct: 132 RIVGDRFVFQSEVLFPSGGNDLNPEGQAEMAKLATALLDLAKEIPAEINWVLRVDGHTDN 191 Query: 275 SPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330 RDNW LS RA S + L+ GV +R+ GF ++ D + Sbjct: 192 VQLTGSGRYRDNWELSSARATSVVKFLISKGVPANRLVAA-GFGEYQPIAEGDSPEARQQ 250 Query: 331 NRRIDILVEDR 341 NRRI++ + +R Sbjct: 251 NRRIELKLTER 261 >gi|327187194|dbj|BAK08932.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor [Bacillus pseudofirmus] Length = 252 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 80/209 (38%), Gaps = 8/209 (3%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 Q + + + + + + E + F P + D+ Sbjct: 40 DAQKFRAISESFQQRQVFEFFPSAIEFENPSEEFGEEFPNPFDEGGFSEEGSNTDEVDMD 99 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + + + G+++ + ++ +F+ + + L L+K+G Sbjct: 100 ELLEEVQEFLEVNEMNDVISATRDDRGVVLVLQERT---LFETAEAELLDSAEPFLEKVG 156 Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314 +L+ ++ + GHTD+ P N NW LS RA S + L++ + + R +G Sbjct: 157 TLLSAIPNMVKVEGHTDSRPISNFRYPSNWELSGARASSVIRYLVETNDLDPKRFIA-TG 215 Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341 + R + + + NRR+ I++ D Sbjct: 216 YGDTRPVVPNTTVENLQLNRRVVIVISDP 244 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 50/157 (31%), Gaps = 3/157 (1%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K++ + W + ++D MT+++ FF++++ ++ D +AI + F Sbjct: 1 MKRRRRQQEK--GAPKWMVAFSDMMTLILVFFILLFSMSVVDAQKFRAISESFQQRQVFE 58 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 S F+ + E + + S ++ ++ Q Sbjct: 59 FFPSAIEFENPSE-EFGEEFPNPFDEGGFSEEGSNTDEVDMDELLEEVQEFLEVNEMNDV 117 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + + + E+ +L S Sbjct: 118 ISATRDDRGVVLVLQERTLFETAEAELLDSAEPFLEK 154 >gi|260842477|ref|YP_003220255.1| flagellar system protein MbhA [Escherichia coli O103:H2 str. 12009] gi|257757624|dbj|BAI29121.1| flagellar system protein MbhA [Escherichia coli O103:H2 str. 12009] Length = 261 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 201 DQMLLDSKNPKSAGNRRIEIMVLTK 225 >gi|37525779|ref|NP_929123.1| flagellar motor protein MotB [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785208|emb|CAE14143.1| chemotaxis protein [Photorhabdus luminescens subsp. laumondii TTO1] Length = 333 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 3/165 (1%) Query: 181 EKILAMKRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 E + A ++L L +++ ++ + +L + G+ I IID+ N PMF Sbjct: 102 EVVEANDEARKLNRLREQLDQLIITDPRLKALRPHLLIDMMDEGLRIQIIDRENRPMFMV 161 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQ 297 S+ +L+ I +L IS+ GHTD + N NW LS DRA ++ + Sbjct: 162 GSAKVESYMSDILRAIAPILNDIPNKISLSGHTDDLKYANGERGYSNWELSADRANASRR 221 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 L+ G+ E +I ++ G A D NRRI ILV ++Q Sbjct: 222 ELLIGGLDEVKILRVVGMASTVRLKQEDASAPVNRRISILVLNKQ 266 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 46/95 (48%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + + +I K+ + ++ GSWKI YADFMT +MAFFLVMW++ + I +Y Sbjct: 2 KTRNVSVIRVKRRKRNGIKHHGGSWKIAYADFMTAMMAFFLVMWLLAISSPQELTRIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103 F + + + D NP ++ + D Sbjct: 62 FRTPLQVAINKGERSSDSSNPIPGGGEDVLHQEGD 96 >gi|288957797|ref|YP_003448138.1| chemotaxis protein [Azospirillum sp. B510] gi|288910105|dbj|BAI71594.1| chemotaxis protein [Azospirillum sp. B510] Length = 464 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 86/301 (28%), Gaps = 13/301 (4%) Query: 53 IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 + ++A+ + + + + I + + Sbjct: 165 SATQLTERQRQALLSELGATRDRAKSLESELASATEKTMLAQKEIDKRDIRLKALETQLT 224 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + + L S + + S + + L D I Sbjct: 225 DNRMQAQKDLDQRDLRIRDLMASLTGEQAAGTRSKQQIDLLNQQLLALRDQLARIGAALE 284 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIID 230 + +K+ + RL L+ ++ + R + I Sbjct: 285 ASEKASADQKVQIAELGARLNQALAAKVQDLARYKSEFFGRVREALGNRPDVRIVGDRFV 344 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR 282 ++ +F S+ L + L V+ + GHTD P R Sbjct: 345 FQSELLFPSGSATLEEAGKQRLADLARTLIEIGKVIPPDINWVLRVDGHTDIKPVRFQFS 404 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 NW LS RA S + L+ G+ +R++ + F + + NRRI+I ++ Sbjct: 405 SNWELSSARALSVVKFLIDQGIPAERLAAAA-FGEFQPIDPGTSDEALAKNRRIEIKLDQ 463 Query: 341 R 341 R Sbjct: 464 R 464 >gi|4580974|gb|AAD24561.1|AF117969_1 OprF [Pseudomonas fluorescens] Length = 326 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 88/283 (31%), Gaps = 9/283 (3%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 K IE FNP + + + + + + D + ++ I ++ L + Sbjct: 45 KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGNQKIKGDTGSLVAQYHFGQA 104 Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 R + S+ + RD + + N + Sbjct: 105 GVDSLRPYVEGGFGHQSRTNVQADGHSGRDQTTFATVGTGVKYYFTNNLYARAGVEADYG 164 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + A + ++ FD Sbjct: 165 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 224 Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ P + ++ + + +A + + GHTD+ N +LS RA + QVL Sbjct: 225 KSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAVKQVL 281 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 +K GV+ RI+ + G+ R + NRR++ VE Sbjct: 282 VKDGVAPSRITAV-GYGESRPVADNATEAGRAVNRRVEASVEA 323 >gi|19704600|ref|NP_604162.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714896|gb|AAL95461.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 202 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 10/146 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A ++I++ F S+ L I + L Sbjct: 64 DNQERELKAKLQGTQAQVRKDGNALVINL---PGGVTFASDSANITSGFYSALNGIAQSL 120 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + E I + G+TD + N LS RA + Q L+ GVS +RI +GF Sbjct: 121 NNYPETRIQVNGYTDNT---GKDAHNQELSQRRANAVAQYLIAQGVSSNRIVA-NGFGSS 176 Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342 ++ NRR++I + Q Sbjct: 177 NPIASNSTPEGRLQNRRVEIKILPAQ 202 >gi|229591826|ref|YP_002873945.1| flagellar motor protein MotD [Pseudomonas fluorescens SBW25] gi|229363692|emb|CAY51066.1| putative chemotaxis protein [Pseudomonas fluorescens SBW25] Length = 297 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 73/203 (35%), Gaps = 10/203 (4%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + D+++ + + + L+ +A IS Sbjct: 52 SQALIGVFNDADRALKPIPIGEERPKTVTPAKPLVNDSDETAAGVGGTSDPLKSIADDIS 111 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + L++ N + + I + ++ +F + ++P + ++ K+ +L Sbjct: 112 AAFGDLISSN---QMTVRGNELWVEIELN---SSLLFASADAMPSDQAFTIIDKVASILR 165 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 I + G TD P NW LS RA S ++L GV+ R++ + G+ + Sbjct: 166 PFENPIHVEGFTDNFPINTAQYPTNWELSSARAASIVRMLAMQGVNPGRLASV-GYGEFQ 224 Query: 320 LKIASDP--MNSANRRIDILVED 340 + + NRR+ ++V Sbjct: 225 PVANNATVEGRARNRRVVLVVSR 247 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 48/121 (39%), Gaps = 7/121 (5%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 + ++ + N W + YADF+T+L AFF+VM+ I++ ++ K I Q + Sbjct: 3 VSRRRREPEEHVNHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKVISQALIGVFNDA 62 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 A K P + ++ + + +S + G + + ++I Sbjct: 63 DRALK-------PIPIGEERPKTVTPAKPLVNDSDETAAGVGGTSDPLKSIADDISAAFG 115 Query: 137 S 137 Sbjct: 116 D 116 >gi|256020246|ref|ZP_05434111.1| hypothetical protein ShiD9_15115 [Shigella sp. D9] gi|332281408|ref|ZP_08393821.1| flagellar motor region [Shigella sp. D9] gi|332103760|gb|EGJ07106.1| flagellar motor region [Shigella sp. D9] Length = 307 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 114/341 (33%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSITTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + +L+ + P+FD Sbjct: 156 VLIKDDQNRNMFE------------------RGSAQIMPFFKMLLVEL-----APVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L + +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 271 >gi|323963541|gb|EGB59099.1| OmpA family protein [Escherichia coli H489] gi|323972411|gb|EGB67618.1| OmpA family protein [Escherichia coli TA007] Length = 261 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N DNW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 201 DQMLLDSKNPQSAGNRRIEIMVLTK 225 >gi|322832491|ref|YP_004212518.1| OmpA/MotB domain protein [Rahnella sp. Y9602] gi|321167692|gb|ADW73391.1| OmpA/MotB domain protein [Rahnella sp. Y9602] Length = 367 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 3/194 (1%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVAD 209 + D ++ + + + + + + LQ L +K+ L+ Sbjct: 74 GPRSSDATSPIPGGGEDPTVQDGEVHKMEQSQGASKRESDDLQRLQQKLEDMLASDPRLK 133 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 ++ ++ T G+ I IID +N PMF S+I P +L+ I VL IS+ Sbjct: 134 DLRPHLMINLTEQGLRIQIIDSKNRPMFQLGSAIVEPYMRDILRAIAPVLDGFPNKISLA 193 Query: 270 GHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 GHTD P+ NW LS +RA ++ + +M G+SE ++ ++ G Sbjct: 194 GHTDDMPYATGERGYSNWELSTERANASRREMMSGGLSEGKVLRVMGMGSSMQLKNHPAG 253 Query: 328 NSANRRIDILVEDR 341 ++ NRRI ILV ++ Sbjct: 254 DAINRRISILVLNK 267 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 57/129 (44%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 ++ ++++KK ++ GSWKI YADFMT +MAFFLVMW+I+ + I + Sbjct: 2 KHQSHPIVVVRKKKNKHGGGHHGGSWKIAYADFMTAMMAFFLVMWLISISSPKELVQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YF +T D +P ++ + H + S ++ ++ Q+ Sbjct: 62 YFRTPLAVAITGGPRSSDATSPIPGGGEDPTVQDGEVHKMEQSQGASKRESDDLQRLQQK 121 Query: 128 ENNIFYLSN 136 ++ Sbjct: 122 LEDMLASDP 130 >gi|167463460|ref|ZP_02328549.1| flagellar motor protein MotB [Paenibacillus larvae subsp. larvae BRL-230010] Length = 258 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 11/194 (5%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 + S + + + A +++ ++L + + + + +++ Sbjct: 69 SMNSGVSGQNMPPKSTVGEITDKKTKERQAAAADMERKEKELQDILKTVQAYIEENHLEA 128 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 + + G+ +++ D +FD + PE VL K+ + ISI GHTD Sbjct: 129 QIAVGNSERGVSVTLKD---LFLFDLGKAELKPEAYPVLNKLASLFPTLDTKISIEGHTD 185 Query: 274 ASPF--RNIARDNWRLSLDRAYSAYQVLMKS---GVSEDRISKISGFAHHRLKIASDP-- 326 P + +DNW LS R+ S + +S+ + +G+A +D Sbjct: 186 NIPVRTGSPFQDNWGLSNARSLSVLRYFTTKADPKISDSKFMS-TGYADTIPVAPNDSME 244 Query: 327 MNSANRRIDILVED 340 + NRR++I++ Sbjct: 245 NRAKNRRVEIVILR 258 >gi|168186129|ref|ZP_02620764.1| chemotaxis MotB protein [Clostridium botulinum C str. Eklund] gi|169295847|gb|EDS77980.1| chemotaxis MotB protein [Clostridium botulinum C str. Eklund] Length = 242 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 60/151 (39%), Gaps = 8/151 (5%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + +N+ V + G+++ + + +FD + + +L KI Sbjct: 92 EEMYRKVKDFTGKNNLDGTVQVKKDARGVILELKEN---ILFDSGQADIKSSSKEILDKI 148 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL-MKSGVSEDRISKIS 313 E++ + I GHTD P N NW LS RA + + + G +++ Sbjct: 149 SELIKSVPNGVVIEGHTDNVPIHNSKYDSNWELSTQRAVNVLKYFVVNKGEKPEKLQAA- 207 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G+ + +D + NRR++IL+ + Sbjct: 208 GYGEYHPIAKNDTYADRAKNRRVNILITVDE 238 Score = 46.5 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 31/90 (34%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ I W YAD +T+L+ FF++++ ++ D K + F + Sbjct: 3 RRKKIQQGEGGGEEWLQTYADTITLLLTFFVLLYASSSIDAVKFKQMSSSFQNVFSGSNS 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 S F+ + S + Sbjct: 63 NSILDFNASGEAPIVGPPEEMGSKAGSGNE 92 >gi|144898366|emb|CAM75230.1| flagellar motor protein MotB [Magnetospirillum gryphiswaldense MSR-1] Length = 319 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 101/320 (31%), Gaps = 32/320 (10%) Query: 37 YAD-FMTVLMAF-FLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSS 94 + D T+LM F+++ F + A G + + Sbjct: 17 FVDAMATLLMVLIFVLLV----------------FVLAQFFMGNALTGRDQALSRLQAEM 60 Query: 95 QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154 + ++ E V + +K Q E + S ++ + + ++ Sbjct: 61 ASMVEQLSLERAKSADVKADLTRLQEKLQASLAERDNLLSSLDEERHLSETARSQADLLN 120 Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 + + + + + + ++K KRL L ++ K Sbjct: 121 QQMTAMREQLEKLAAALDATEKLSVEQKAQIADLGKRLNVALAGKVEELQRYRSEFFGKL 180 Query: 215 VLFETTRTGILIS----------IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 R GI I + D + + ++ ++ Sbjct: 181 RKVLGERQGIRIEGDRFVFQSELLFDSASADLGVSGEQQVRQLAKTLIDLSKQIPKEVNW 240 Query: 265 VISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 V+ + GHTD P + NW LS RA S + L+ +GV DR+ +GF Sbjct: 241 VLRVDGHTDKRPIKSGRFPSNWELSTARAISVIRTLIDAGVPADRL-AAAGFGEFLPLDN 299 Query: 324 SDPMN--SANRRIDILVEDR 341 SD + NRRI+I + R Sbjct: 300 SDSEAALAKNRRIEIRFDQR 319 >gi|94969959|ref|YP_592007.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter versatilis Ellin345] gi|94552009|gb|ABF41933.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter versatilis Ellin345] Length = 263 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 80/225 (35%), Gaps = 9/225 (4%) Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 Y + + + + S + + L S E + Sbjct: 37 YASSQTDQKRAAKISSAIEQAFEQLGLGTSNPPGNTSRVAPITPEIRASSSLADRSHETL 96 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNI-VKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 +++ + + L + + + V TT G++IS+ + FD S+ Sbjct: 97 DIGSQRRVTAAQVQTLRGELQAAIPEELTRSDVTLRTTSDGLVISLQE---IGFFDSGSA 153 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAY-SAYQVLM 300 P +I +I +L + + GHTD P NW LS RA +++ Sbjct: 154 KLRPSSISAFGRIASILREKQCTVRVEGHTDPMPIHTAQYASNWELSTARATGIVKRLIQ 213 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 + G++ +S G+A +D + NRR+D+++ QG Sbjct: 214 EYGINPGDLSAG-GYAEFHPVGPNDTAEGRAQNRRVDLVILSMQG 257 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 + T N W + YADF+T+L AFF+V++ + TD I + L Sbjct: 4 RPTRQRRTRANNERWLVSYADFITLLFAFFVVLYASSQTDQKRAAKISSAIEQAFEQLGL 63 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + + + S + ++D+ Q Q L + + Sbjct: 64 GTSNPPGNTSRVAPITPEIRASSSLADRSHETLDIGSQRRVTAAQVQTLRGELQAAIPEE 123 >gi|303239756|ref|ZP_07326280.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2] gi|302592693|gb|EFL62417.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2] Length = 277 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 97/324 (29%), Gaps = 80/324 (24%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + + +W + Y+D +M L ++I+ K Sbjct: 4 KKVHHEEHADETWLLPYSD----MMTLLLALFIV--------------MFAMSKTDNAKM 45 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K + ++ + ++ + I + +G++ Sbjct: 46 KEMSEQFSIVFSGGAGMMEGDGNSVIPLVKNESSVGTSE--------------------- 84 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 EN +S K K ++++++ I Sbjct: 85 ------------------------------ENSNDITVSTTKSNETKEDEKMKEIKDNIE 114 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 +S + + G+ ISI D +F+ + E +L K+ ++ Sbjct: 115 KEISE---EGYSNNIKLVLDSEGLEISIQD---VVLFNTGEADIKKEVYPLLLKLTGIIK 168 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHH 318 I + GHTD P N R NW LS RA + + G + ++ I Sbjct: 169 GLNNSIKVVGHTDNVPIHNDKFRSNWDLSSFRAINVMSFMRDQGKLRPEKF-SIQACGEF 227 Query: 319 RLKIASDPM--NSANRRIDILVED 340 + K + + NRR++I + Sbjct: 228 KPKYDNSTEEGRAKNRRVEIYIVR 251 >gi|260853484|ref|YP_003227375.1| putative lateral flagellar motor protein [Escherichia coli O26:H11 str. 11368] gi|260866430|ref|YP_003232832.1| putative lateral flagellar motor protein [Escherichia coli O111:H- str. 11128] gi|257752133|dbj|BAI23635.1| predicted lateral flagellar motor protein [Escherichia coli O26:H11 str. 11368] gi|257762786|dbj|BAI34281.1| predicted lateral flagellar motor protein [Escherichia coli O111:H- str. 11128] gi|323158085|gb|EFZ44184.1| lateral flagellar motor protein B [Escherichia coli EPECa14] gi|323178474|gb|EFZ64052.1| lateral flagellar motor protein B [Escherichia coli 1180] Length = 307 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + +I L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L + +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 271 >gi|153940977|ref|YP_001391952.1| chemotaxis motB protein [Clostridium botulinum F str. Langeland] gi|152936873|gb|ABS42371.1| chemotaxis motB protein [Clostridium botulinum F str. Langeland] gi|295319971|gb|ADG00349.1| chemotaxis motB protein [Clostridium botulinum F str. 230613] Length = 247 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ D + +N+ V + GI+I + D +F+ + P++ Sbjct: 88 RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306 ++ KI ++A + I GHTD P +N NW LS RA + + ++ + Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 R + G+ +R ++ + NRR++I++ ++ Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANRAKNRRVNIVIVSKE 241 >gi|641920|gb|AAA85840.1| protein F precursor [Pseudomonas fluorescens] Length = 317 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P + ++ + + +A + + GHTD+ N +LS RA + Sbjct: 218 FDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAV 274 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 QVL+K GV+ RI+ + G+ R + NRR++ Sbjct: 275 KQVLVKDGVAPSRITAV-GYGESRPVADNATEAGRAVNRRVE 315 >gi|315127968|ref|YP_004069971.1| lipoprotein [Pseudoalteromonas sp. SM9913] gi|315016482|gb|ADT69820.1| lipoprotein [Pseudoalteromonas sp. SM9913] Length = 210 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 11/151 (7%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + + GV + + + F S L I Sbjct: 67 DYMDKQEAAFRDELAGSGVEVVREGDNLRLVMPSNIT---FATDQSYISSGFHDTLNAIA 123 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 V+ +S+ GHTD++ N LS RA S L+ + R+S SG+ Sbjct: 124 SVMNKYEKTYLSVEGHTDST---GKDSYNMTLSEQRAQSVKNYLVNQQIMAARVST-SGY 179 Query: 316 AHHRLKIASDPM--NSANRRIDI-LVEDRQG 343 R +D + NRR++I +V + QG Sbjct: 180 GESRPIATNDTANGRAQNRRVEIQIVPNTQG 210 >gi|229592015|ref|YP_002874134.1| putative outer membrane porin A protein [Pseudomonas fluorescens SBW25] gi|229363881|emb|CAY51363.1| putative outer membrane porin A protein [Pseudomonas fluorescens SBW25] Length = 326 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 88/283 (31%), Gaps = 9/283 (3%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 K IE FNP + + + + + + D + ++ I ++ L + Sbjct: 45 KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGNQKIKGDTGSLVAQYHFGQA 104 Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 R + S+ + RD + + N + Sbjct: 105 GVDSLRPYVEGGFGHQSRTNVQADGHSGRDQTTFATVGTGVKYYFTNNLYARAGVEADYG 164 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + A + ++ FD Sbjct: 165 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 224 Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ P + ++ + + +A + + GHTD+ N +LS RA + QVL Sbjct: 225 KSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAVKQVL 281 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 +K GV+ RI+ + G+ R + NRR++ VE Sbjct: 282 VKDGVAPSRITAV-GYGESRPVADNATEAGRAVNRRVEASVEA 323 >gi|87201185|ref|YP_498442.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444] gi|87136866|gb|ABD27608.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444] Length = 230 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 8/142 (5%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV T G I +++ N FD SS P L ++ + L Sbjct: 79 DKQIRELREQTAGTGVDVTETDNGQAI-LVNLPNGVTFDVDSSTVKPAFATTLDRVAQSL 137 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I + GHTD++ N LS RA + L+ GV RI GF Sbjct: 138 VQYPNSLIDVYGHTDST---GSDAYNQALSERRARAVADYLISRGVGYARIRS-QGFGES 193 Query: 319 RLKIASDPM--NSANRRIDILV 338 + ++D ANRR++I + Sbjct: 194 QPIASNDTEQGRQANRRVEIKI 215 >gi|269959951|ref|ZP_06174328.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835250|gb|EEZ89332.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 326 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 ++ T F+ S+ L L + + I G+TD+ A N +LS Sbjct: 207 EEYGTGTFEFDSATLTDSVSERLDNFVNFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 263 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S L+ +G+ DR + G + NRR++++V Sbjct: 264 ERRAQSVADYLIAAGIDADRF-TVKGMGEENPVADNSTHEGREKNRRVEVVV 314 >gi|153833224|ref|ZP_01985891.1| outer membrane protein OmpA [Vibrio harveyi HY01] gi|148870495|gb|EDL69410.1| outer membrane protein OmpA [Vibrio harveyi HY01] Length = 326 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 ++ + F+ S+ L L + + I G+TD+ A N +LS Sbjct: 207 EEYGSGTFEFDSAKLTDSVSERLDNFVNFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 263 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + L+ +G+ DR ++G + NRR++++V Sbjct: 264 ERRAQAVADYLIAAGIDADRF-TVTGMGEENPVADNSTHEGREQNRRVEVVV 314 >gi|293605836|ref|ZP_06688207.1| flagellar motor protein MotB [Achromobacter piechaudii ATCC 43553] gi|292815749|gb|EFF74859.1| flagellar motor protein MotB [Achromobacter piechaudii ATCC 43553] Length = 361 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 96/290 (33%), Gaps = 7/290 (2%) Query: 53 IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 + + ++A + + SK ++ + + + ++ + Sbjct: 7 SLAQRIEQARQAQLRAQKAADNSGWRPSKSDRKDRYARWHVDETPEQDAENWLLSYLDLI 66 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + + + ++ + E K D Sbjct: 67 TLLLAMLVVMLAVSRLHGQATQASDKPIELVGTLAAAGLPKYDGEYSEFDAVSIPASWAE 126 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 PP E + + + L ++ K V + I Sbjct: 127 PPPPPAVAEAAAVEDGVTVAEAAPPLKAPSKESLGLGDLAKSVDVIINEQSVSFRI---S 183 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDR 291 N +F + P + V++++ +L + +S+ GH+D P + NW LS R Sbjct: 184 NELLFPSGQATLSPSGLDVIKRLAGILNKNAYQVSVEGHSDPVPIQTRQFASNWELSSSR 243 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 A S + L+ GV+ +R+ + G+A R +D +ANRR++++++ Sbjct: 244 ATSVLRELVHDGVAPERLRAV-GYAETRPIETNDTPAGRAANRRVELIMD 292 >gi|262197216|ref|YP_003268425.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262080563|gb|ACY16532.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 374 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 17/258 (6%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 + + D K + + K G ++ + + S ++ Sbjct: 124 DSDGDGIFDDRDACKGAPEDKDGFEDEDGCPDLDNDQDGIVDASDACPLEPEDKDGLDDE 183 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-------DLAKKISSTLSGL 206 + D + + ++ P K+ + + S Sbjct: 184 DGCPEEDRDGDMIADNKDQCPDEPEDKDGFADEDGCPDCDNDGDGVPECPVVVDQCPSKA 243 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV- 265 V T I I + T F+ + P + +L ++ VL + E+ Sbjct: 244 AKTPDGCPVYNLVKVTSKKIEI---KQTIYFETGKNTIKPVSFALLNEVATVLTDNPEIE 300 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 + I GHTD+ A N LS RA S L+ GV DR+ G+ ++ Sbjct: 301 VRIEGHTDSR---GSAEFNMELSQSRAESVRSFLIDKGVDGDRLEA-KGYGESAPIANNN 356 Query: 326 PMN--SANRRIDILVEDR 341 + NRR++ ++ R Sbjct: 357 TRAGQAQNRRVEFVIVSR 374 >gi|229522162|ref|ZP_04411579.1| outer membrane protein A precursor [Vibrio cholerae TM 11079-80] gi|229341087|gb|EEO06092.1| outer membrane protein A precursor [Vibrio cholerae TM 11079-80] Length = 321 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +S+ P T+ L KI L + + + GHTD++ N +LS R Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERR 264 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + + L G+ RIS G ++ NRR+++++ Sbjct: 265 AQAVAKALEAQGIDASRISA-KGLGESSPIASNATAEGREKNRRVELVI 312 >gi|170754769|ref|YP_001781838.1| chemotaxis MotB protein [Clostridium botulinum B1 str. Okra] gi|169119981|gb|ACA43817.1| putative chemotaxis MotB protein [Clostridium botulinum B1 str. Okra] Length = 254 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 11/162 (6%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 +M +++++ K+ + V G+ I I D +F+ + Sbjct: 83 DSMTEDIKMKEIKSKLEKEIEKS---GYSDKVKVGVDADGLEIDIQD---VVLFNSGDAE 136 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK- 301 L ++ +L +I ++L I + GHTD P N R NW LS RA + L Sbjct: 137 VLKQSSALLTQISKMLKGLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNI 196 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 G+S +++ I + + K + + NRR++I + + Sbjct: 197 GGISANKL-SIQAYGEYMPKFDNATEAGRAKNRRVEISIVRK 237 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 48/121 (39%), Gaps = 3/121 (2%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W I Y+D +T+L+A F+VM+ ++ D + Q FN K Sbjct: 2 KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKA---G 58 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S + + + + + + +T++ +I S +K+ + ++ + Sbjct: 59 SNVLQEGGGGGASVGKAGVSIVPSDSMTEDIKMKEIKSKLEKEIEKSGYSDKVKVGVDAD 118 Query: 140 S 140 Sbjct: 119 G 119 >gi|330964668|gb|EGH64928.1| flagellar motor protein MotD [Pseudomonas syringae pv. actinidiae str. M302091] Length = 295 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 66/193 (34%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 57 NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + ++ +F ++P + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 TD P NW LS RA S ++L G++ R++ + G+ + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARAASIVRMLAMDGINPARLASV-GYGEFQPIAPNTTAAG 232 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 RAKNRRVVLVISR 245 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 3 RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTERT 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 K I + P S + + + ++ + + Q + + L S Q Sbjct: 63 MKPIPIGEQRP--VSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120 >gi|330014716|ref|ZP_08307964.1| OmpA family protein [Klebsiella sp. MS 92-3] gi|328532776|gb|EGF59559.1| OmpA family protein [Klebsiella sp. MS 92-3] Length = 568 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 86/299 (28%), Gaps = 20/299 (6%) Query: 50 VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 V+W + ++ + + D S Sbjct: 252 VLWGLGP-------SLPGSLASSAWTTWLSRHSGLSRVAGWQPDESGTGDASALPEFILP 304 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + G T + + ++ + + N+ G D+ + + + Sbjct: 305 QLPAGRGLTPRGRAWRAALAIFTLAAVAALLSSGWNNRQLLQRVGVDIARYERIAMDDYR 364 Query: 170 EENYFLPPLSKEKIL----AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR---T 222 + + L ++ L A L + + + I V Sbjct: 365 PKASAVRVLREDAALLDSWARNGVPLRLSLGLYRGEQIRLPLLEAIRGYVPPPPPPRPVQ 424 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281 + ++I + +FD + P + L + I + GHTD+ Sbjct: 425 RVAPNVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSV---GEE 481 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + N LSL RA S + +G D + G+ R +D + NRR++I + Sbjct: 482 KANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540 >gi|288935830|ref|YP_003439889.1| OmpA/MotB domain protein [Klebsiella variicola At-22] gi|288890539|gb|ADC58857.1| OmpA/MotB domain protein [Klebsiella variicola At-22] Length = 568 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 86/299 (28%), Gaps = 20/299 (6%) Query: 50 VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 V+W + ++ + + + D S Sbjct: 252 VLWGLGP-------SLPGSLASSAWTTWLSRHSGLSRVAGWQPDESDTGDASALPEFILP 304 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + G T + + ++ + + N+ G D+ + + + Sbjct: 305 QLPAGRGLTPRGRAWRAALAIFTLAAVAALLSSGWNNRQLLQRVGVDIARYERIAMDDYR 364 Query: 170 EENYFLPPLSKEKIL----AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR---T 222 + + L ++ L A L + + + I V Sbjct: 365 PKASAVRVLREDAALLDSWARNGVPLRLSLGLYHGEQIRLPLLEAIRGYVPPPPPPRPVQ 424 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281 + +I + +FD + P + L + I + GHTD+ Sbjct: 425 HVAPDVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSV---GEE 481 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + N LSL RA S + +G D + G+ R +D + NRR++I + Sbjct: 482 KANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540 >gi|148380609|ref|YP_001255150.1| chemotaxis MotB protein [Clostridium botulinum A str. ATCC 3502] gi|153936730|ref|YP_001388364.1| chemotaxis motB protein [Clostridium botulinum A str. Hall] gi|148290093|emb|CAL84212.1| putative chemotaxis MotB protein [Clostridium botulinum A str. ATCC 3502] gi|152932644|gb|ABS38143.1| chemotaxis protein MotB [Clostridium botulinum A str. Hall] Length = 247 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ D + +N+ V + GI+I + D +F+ + P++ Sbjct: 88 RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306 ++ KI ++A + I GHTD P +N NW LS RA + + ++ + Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 R + G+ +R ++ + NRR++I++ ++ Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANRAKNRRVNIVIVSKE 241 >gi|114799250|ref|YP_759621.1| putative chemotaxis protein MotB [Hyphomonas neptunium ATCC 15444] gi|114739424|gb|ABI77549.1| putative chemotaxis protein MotB [Hyphomonas neptunium ATCC 15444] Length = 226 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 69/173 (39%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 S K A + + A+ ++ + V + TG+ Sbjct: 50 SKEDRAVIASEFTGKPVSTAFHSDQAVSGAAELLALLRQSEGLKAAGESVQLSSDATGVR 109 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I ++D P+F+ S + ++Q L+ +SI GHTDA A NW Sbjct: 110 IELVDTAGRPLFETGSGALTADGAALIQAAAMSLSGLPYALSIEGHTDAFSMTGAASSNW 169 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 LS RA A + L +G DR+ ++G+A R A P +ANRRI + V Sbjct: 170 ELSSQRANEARRALEMAGFGTDRVKAVTGYADTRPLNAGQPHLAANRRISLQV 222 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 43/160 (26%) Query: 31 GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90 G+WK+ YADF+T L+AFF++MW+++ + + I F + S Sbjct: 23 GTWKLAYADFLTALVAFFMLMWLVSGVSKEDRAVIASEFTGKPVSTAFHSDQAVSGAAEL 82 Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 + L + S D R + + + Sbjct: 83 LALLRQSEGLKAAGESVQLSSDATGVRIELVDTAGRPLFETGSGALTADGAALIQAAAMS 142 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + + R+ Sbjct: 143 LSGLPYALSIEGHTDAFSMTGAASSNWELSSQRANEARRA 182 >gi|15895120|ref|NP_348469.1| flagellar motor protein MotB [Clostridium acetobutylicum ATCC 824] gi|15024821|gb|AAK79809.1|AE007693_7 Flagellar motor protein MotB [Clostridium acetobutylicum ATCC 824] gi|325509259|gb|ADZ20895.1| Flagellar motor protein MotB [Clostridium acetobutylicum EA 2018] Length = 254 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 11/179 (6%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 ++ + E + + + ++ K I ++ + + + T G+ I Sbjct: 74 VSSMKESTPSNAQSESNNSKIEQDMMNEIKKNIDQKVAE---NGYTDKIKSKITEEGLAI 130 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNW 285 SI D +F S L +L +I +++ I + GHTD P NW Sbjct: 131 SIQD---IILFRSGDSTVLANIQPMLIEISKMIHSLDNNIKVTGHTDNIPIATETFHSNW 187 Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS RA + + ++ GV E R I + + + + + NRR++I + + Sbjct: 188 ELSASRALNVMKFMVTSGGVDEKRF-SIQAYGEYSPEETNSTEQGRARNRRVEIFILRK 245 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 45/142 (31%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 +W I YAD +T+L+A F+VM+ ++ D+ + + Q F+ + Sbjct: 14 DETWLIPYADMLTLLLALFIVMFAMSKVDNKKLQKMSQEFSAIFSSGKGVLVESGTGNGV 73 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 ++ + E + + + EN S+ +E + Sbjct: 74 VSSMKESTPSNAQSESNNSKIEQDMMNEIKKNIDQKVAENGYTDKIKSKITEEGLAISIQ 133 Query: 150 DSEKGKDLCKSTDLEKSINKEE 171 D + + E Sbjct: 134 DIILFRSGDSTVLANIQPMLIE 155 >gi|310817591|ref|YP_003949949.1| outer membrane protein [Stigmatella aurantiaca DW4/3-1] gi|309390663|gb|ADO68122.1| outer membrane protein [Stigmatella aurantiaca DW4/3-1] Length = 632 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 85/268 (31%), Gaps = 21/268 (7%) Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 + + G Q P++ D + + + Sbjct: 370 ADKCPQTPGAASAQGCPDQDGDGIQDSEDKCPAAAGNAAGQGCPDKDGDGIDDASDRCPA 429 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 + + + C K D + ++++++ E + Sbjct: 430 EAGPAERQGCPI-------------KDADNDGVLDEQDSCPNEAGLPELKGCPAKDADND 476 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 LA + + + + + I I+ + FD ++S + +L Sbjct: 477 TLADHLDNCPNEAGPVDNQGCPAKQKQLVAIRQDRIEIKEAVYFDSNASTIQARSNGLLD 536 Query: 254 KIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++ ++L E++S+ GHTD A N LS RA + L+K GV+ +R+ Sbjct: 537 QMAKLLNEHPEIVSVLIEGHTDDR---GAADYNRTLSKQRADTVRDYLVKKGVAAERLET 593 Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDIL 337 G+ R + NRR+D L Sbjct: 594 -QGYGPDRPVQPNTTAAGRTANRRVDFL 620 >gi|294678012|ref|YP_003578627.1| OmpA family protein [Rhodobacter capsulatus SB 1003] gi|294476832|gb|ADE86220.1| OmpA family protein [Rhodobacter capsulatus SB 1003] Length = 224 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 63/171 (36%), Gaps = 10/171 (5%) Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 L K A+ + ++ L D GV +++++ Sbjct: 61 DEKLEKAAAGAIVGGLIGGAIGNQLDKQAQELRRDLDTNGVSVVRQGNQLIVTMPQD--- 117 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293 +F S+ P+ L + L + + GHTD+ A N RLS DRA Sbjct: 118 VLFAVDSAAVRPDLQRDLYTLSGSLNRYPDTTVDVVGHTDSD---GDAAYNQRLSQDRAN 174 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 + ++L+ +GV R+ G + ++ + NRR++ ++ + Sbjct: 175 AVARILIGAGVPSYRVVAY-GRGEEQPVASNLSAAGKAQNRRVEFIIRPNR 224 >gi|152969879|ref|YP_001334988.1| putative outer membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954728|gb|ABR76758.1| putative outer membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 568 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 87/299 (29%), Gaps = 20/299 (6%) Query: 50 VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 V+W + ++ + + + D S Sbjct: 252 VLWGLGP-------SLPGSLASSAWTTWLSRHSGLSRVAGWQPDESDTGDASALPEFILP 304 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + G T + + ++ + + N+ G D+ + + + Sbjct: 305 QLPAGRGLTPRGRAWRAALAIFTLAAVAALLSSGWNNRQLLQRVGVDIARYERIAMDDYR 364 Query: 170 EENYFLPPLSKEKIL----AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR---T 222 + + L ++ L A L + + + I V Sbjct: 365 PKASAVRVLREDAALLDSWARNGVPLRLSLGLYRGEQIRLPLLEAIRGYVPPPPPPRPVQ 424 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281 + ++I + +FD + P + L + I + GHTD+ Sbjct: 425 RVAPNVIRLDSMSLFDTGKWVLKPGSTKRLVNSLMDIKARPGWLIVVAGHTDSV---GEE 481 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + N LSL RA S + +G D + G+ R +D + NRR++I + Sbjct: 482 KANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540 >gi|332283607|ref|YP_004415518.1| hypothetical protein PT7_0354 [Pusillimonas sp. T7-7] gi|330427560|gb|AEC18894.1| hypothetical protein PT7_0354 [Pusillimonas sp. T7-7] Length = 443 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 4/110 (3%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDR 291 +F S E I VL ++ + L S I + G++D P R NW LS R Sbjct: 317 GDGLFTSGSDELRSEYIPVLSRVADALNQSRGSILVSGYSDNVPIRTVRFPSNWELSQAR 376 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 A + +L +R+ + G ++ + NRR++I + Sbjct: 377 ADAVKALLQDRLTQPERV-RAEGRGDANPVAPNNTPANRARNRRVEITLL 425 >gi|297583574|ref|YP_003699354.1| OmpA/MotB domain-containing protein [Bacillus selenitireducens MLS10] gi|297142031|gb|ADH98788.1| OmpA/MotB domain protein [Bacillus selenitireducens MLS10] Length = 256 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 83/191 (43%), Gaps = 11/191 (5%) Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 + D + + + P S ++ ++ ++L DL ++++ + +++ + Sbjct: 65 PFENPAEDRDVRDDPFDADVDPFESHMEMDEVEMSEQLDDLLEEVNEFIED---NDLTEN 121 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274 + G+++ + +Q +F+ + + LP+ L+K+G ++ ++ + GHTD+ Sbjct: 122 ISATRDDRGVVLVLQEQ---ALFETARAEILPQAEPFLEKVGTLVTTVPNMVKVEGHTDS 178 Query: 275 SPFRN-IARDNWRLSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPMN--SA 330 P NW LS RA S + L V E R + G+ R + + Sbjct: 179 RPINTVQFPSNWELSGARASSVIRFILSNFDVDERRFLAV-GYGETRPVAPNTTPDNLQQ 237 Query: 331 NRRIDILVEDR 341 NRR+ I++ D Sbjct: 238 NRRVVIVISDP 248 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 4/160 (2%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 P W + ++D MT+++ FF++++ ++ D + +AI + F S Sbjct: 3 RKKKQGPKGAPKWMVTFSDLMTLILVFFILLFSMSVVDANRFEAIAESFQERAIFDFYPS 62 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 F+ + D +D + +D +Q L + Sbjct: 63 LIPFENPAEDRDVRDDPFDADVDPFESHMEMD----EVEMSEQLDDLLEEVNEFIEDNDL 118 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 ++ D L + E + + P L K Sbjct: 119 TENISATRDDRGVVLVLQEQALFETARAEILPQAEPFLEK 158 >gi|239781764|pdb|2ZOV|A Chain A, Structure Of The Periplasmic Domain Of Motb From Salmonella (Crystal Form I) Length = 210 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 3/177 (1%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILIS 227 +++ + +++ + RL L + + + + + + G+ I Sbjct: 6 QQQGEVEKQPNIDELKKRXEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQ 65 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNW 285 IID +N P F S+ P +L+ I VL IS+ GHTD P+ N NW Sbjct: 66 IIDSQNRPXFKTGSAEVEPYXRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNW 125 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 LS DRA ++ + L+ G+ ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 126 ELSADRANASRRELVAGGLDNGKVLRVVGXAATXRLSDRGPDDAINRRISLLVLNKQ 182 >gi|74310872|ref|YP_309292.1| hypothetical protein SSON_0272 [Shigella sonnei Ss046] gi|293418347|ref|ZP_06660782.1| chemotaxis protein MotB [Escherichia coli B088] gi|73854349|gb|AAZ87056.1| putative motility protein [Shigella sonnei Ss046] gi|291324875|gb|EFE64290.1| chemotaxis protein MotB [Escherichia coli B088] Length = 261 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 201 DQMLLDSKNPQSAGNRRIEIMVLTK 225 >gi|77457796|ref|YP_347301.1| flagellar motor protein MotD [Pseudomonas fluorescens Pf0-1] gi|77381799|gb|ABA73312.1| putative chemotaxis protein [Pseudomonas fluorescens Pf0-1] Length = 296 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 10/194 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 DS++ + + + L+ +A IS+ L++ Sbjct: 58 DSDRALKPIPIGEERPKTVTPAKPLVKDAEQVDAGIAGASDPLKSIADDISAAFGDLISS 117 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 N + + I + ++ +F ++P ++ K+ +L I + Sbjct: 118 N---QMTVRGNELWVEIELN---SSLLFGSGDAMPSDIAFNIIDKVAAILKPFDNPIHVE 171 Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327 G TD P R NW LS R+ S ++L GV+ R++ + G+ + + Sbjct: 172 GFTDDQPIRTAQYPTNWELSSARSASIVRMLAMQGVNPGRLASV-GYGEFQPVANNATAE 230 Query: 328 -NSANRRIDILVED 340 + NRR+ ++V Sbjct: 231 GRAKNRRVVLVVSR 244 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 7/118 (5%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K I + + A Sbjct: 3 RRRQHEEHVNHERWLVSYADFITLLFAFFVVMYSISSINEGKYKIISEALIGVFTDSDRA 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 K P + ++ + + K++ + G + + ++I Sbjct: 63 LK-------PIPIGEERPKTVTPAKPLVKDAEQVDAGIAGASDPLKSIADDISAAFGD 113 >gi|194427556|ref|ZP_03060104.1| putative chemotaxis protein [Escherichia coli B171] gi|194414326|gb|EDX30600.1| putative chemotaxis protein [Escherichia coli B171] Length = 256 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 92/205 (44%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P L ++ Sbjct: 76 ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTQLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 196 DQMLLDSKNPKSAGNRRIEIMVLTK 220 >gi|73532502|dbj|BAE19809.1| chemotaxis protein [Edwardsiella tarda] Length = 222 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 3/158 (1%) Query: 187 KRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 +R RL+ L +++ ++ + ++ G+ I IID +N PMF S+ Sbjct: 1 RRAVRLKRLLQRLEQVIINDPRLKALRPHLMINMMDEGLRIQIIDSQNRPMFQNGSAQVE 60 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSG 303 P +L+ I +L IS+ GHTD P+ N NW LS DRA ++ + L+ G Sbjct: 61 PYMRNILRAIAPILNELPNKISLSGHTDDLPYANGERGYSNWELSADRANASRRELIAGG 120 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ ++I ++ G A + NRRI ILV ++ Sbjct: 121 LAGNKILRVVGMADTMNLRNLAGNAAVNRRISILVLNK 158 >gi|91209318|ref|YP_539304.1| hypothetical protein UTI89_C0270 [Escherichia coli UTI89] gi|91070892|gb|ABE05773.1| putative motility protein MbhA [Escherichia coli UTI89] Length = 262 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 94/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 22 AALHGQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 81 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 82 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 141 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL I I GHTDA ++N +NW LS DRA SA +VL ++G+ E+++ ++S A Sbjct: 142 PVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMA 201 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 202 DQMLLDAKNPQSAGNRRIEIMVLTK 226 >gi|187778759|ref|ZP_02995232.1| hypothetical protein CLOSPO_02354 [Clostridium sporogenes ATCC 15579] gi|187772384|gb|EDU36186.1| hypothetical protein CLOSPO_02354 [Clostridium sporogenes ATCC 15579] Length = 251 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 79/206 (38%), Gaps = 8/206 (3%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + K + + +S + N + K+ D + + Sbjct: 44 DAQKFQQVASAMQVAMTGQSGNTIVDYNLKNGDVPLVGETTKLGRETGSDAKSDSKEVYN 103 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + +N+ V + G++I + D +F+ + P++ ++ KI ++A Sbjct: 104 EVNKFVDKNNLKSSVEVKEDGRGVIIQLRDN---VLFEIGRADIKPQSKQIMDKINGLIA 160 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 + + GHTD P +N NW LS RA + + ++ + R + G+ + Sbjct: 161 TLPNEVIVEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAA-GYGEY 219 Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342 R ++ + NRR++I++ ++ Sbjct: 220 RPIAQNNSDVNKAKNRRVNIVIVSKE 245 >gi|218557186|ref|YP_002390099.1| hypothetical protein ECS88_0265 [Escherichia coli S88] gi|218363955|emb|CAR01620.1| flagellar system protein [Escherichia coli S88] Length = 296 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 94/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 56 AALHGQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 115 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 116 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 175 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL I I GHTDA ++N +NW LS DRA SA +VL ++G+ E+++ ++S A Sbjct: 176 PVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMA 235 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 236 DQMLLDAKNPQSAGNRRIEIMVLTK 260 >gi|311106778|ref|YP_003979631.1| motility protein B 2 [Achromobacter xylosoxidans A8] gi|310761467|gb|ADP16916.1| motility protein B 2 [Achromobacter xylosoxidans A8] Length = 320 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 78/193 (40%), Gaps = 7/193 (3%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 D E + + + + + A + + + + + L Sbjct: 109 DGEYSEFDAVQIPASWAQAEAPAVAVAAAAASAQPAQEGEVVAEAAPPLRAPSKESLGLG 168 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 ++ K V + I N +F + P + V++++ +L + +S+ Sbjct: 169 DLGKSVDVIINEQSVSFRI---SNELLFPSGQATLSPTGLDVIKRLAAILNKNEYQVSVE 225 Query: 270 GHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-- 326 GH+D P + NW LS RA S + L++ GVS R+ + G+A R ++D Sbjct: 226 GHSDPVPIQTRQFASNWELSSSRATSVLRELVRDGVSAQRLRAV-GYAETRPIESNDTQA 284 Query: 327 MNSANRRIDILVE 339 +ANRR++++++ Sbjct: 285 GRAANRRVELIMD 297 >gi|193063256|ref|ZP_03044347.1| putative chemotaxis protein [Escherichia coli E22] gi|192931164|gb|EDV83767.1| putative chemotaxis protein [Escherichia coli E22] gi|323160305|gb|EFZ46258.1| lateral flagellar motor protein B [Escherichia coli E128010] Length = 256 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 196 DQMLLDSKNPKSAGNRRIEIMVLTK 220 >gi|292490769|ref|YP_003526208.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4] gi|291579364|gb|ADE13821.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4] Length = 301 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 73/249 (29%), Gaps = 18/249 (7%) Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 D T G +N Q + + Sbjct: 64 SNPFIPDSDNDGVPDDTDQCPGTPEGVEVDTVGCPLDNDNDGVPDYLDQCPDTPVGVAVN 123 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 SE + +++ P + + L ++ + Sbjct: 124 SEGCPLDSDGDGVPDYLDQC------PDTPPGVAVNSEGCPLDSDGDGVTDDVDQCPDTP 177 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269 V +++ F S+ PE +L + + L + ++I Sbjct: 178 AGVEVDEVGCPEPVVLE-----GGVHFAFDSAKLTPEARDILDETADSLRTHPDLEVTIE 232 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327 GHTD+ A N RLS RA +A L+ GV + R+ + G+ + ++ Sbjct: 233 GHTDSV---GNADYNKRLSQLRAEAAMNYLVSQGVDQSRLEAV-GYGEAQPIASNKTKEG 288 Query: 328 NSANRRIDI 336 + NRR+++ Sbjct: 289 RAQNRRVEL 297 >gi|183179549|ref|ZP_02957760.1| outer membrane protein OmpA [Vibrio cholerae MZO-3] gi|183012960|gb|EDT88260.1| outer membrane protein OmpA [Vibrio cholerae MZO-3] Length = 321 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 56/145 (38%), Gaps = 10/145 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 S + +V + T + ++ ++ F +S+ P T+ L KI Sbjct: 172 SEEPAPVVEQRPAEPAPVATPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKIV 231 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L + + + GHTD++ N +LS RA + + L G+ RIS G Sbjct: 232 GYLNQYPQAKVEVVGHTDST---GSEAYNQKLSERRAQAVAKALEAQGIDASRISA-KGL 287 Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338 ++ NRR+++++ Sbjct: 288 GESSPIASNATAEGREKNRRVELVI 312 >gi|298372486|ref|ZP_06982476.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275390|gb|EFI16941.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058] Length = 567 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + + E+ L K + L + I+I GHTD+ N +LS RA S Sbjct: 466 FNTNDTSLTAESNKELDKQAKFLKENPNVNITIVGHTDSR---GSDEYNLKLSEGRAVSV 522 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 + L+ G++ +R+ G + +++ + NRRI+I V Sbjct: 523 MRALIDRGIAPERLKA-EGRGETQPVASNETEEGRAENRRIEIEVR 567 >gi|138896104|ref|YP_001126557.1| flagellar motor protein MotB [Geobacillus thermodenitrificans NG80-2] gi|134267617|gb|ABO67812.1| Chemotaxis MotB protein [Geobacillus thermodenitrificans NG80-2] Length = 260 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 84/209 (40%), Gaps = 10/209 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + ++ T + + ++E ++ K K+ L + Sbjct: 47 QKIASSFSSAFTGGNGVLDFPNPVEPITPPAAQDEQGQEREKQPSPAMSQKEKEGLAQVK 106 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 +KI + + + + T G+ I+I+D +FD S+ + + ++ Sbjct: 107 EKIDVYIQE---NKLGGKLQTSLTEEGLAITILDD---ILFDSGSAEVRMKDRRLASEVA 160 Query: 257 EVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 +L + + I GHTD P N NW LS+ RA + +VL+++ + R G Sbjct: 161 ALLVMNPPRNVIISGHTDNVPIHNAQFASNWELSVMRAVNFMKVLLENKQLDPRYFSAKG 220 Query: 315 FAHHRLKIASDPMNSA--NRRIDILVEDR 341 + ++ +++ NRR++IL+ R Sbjct: 221 YGEYKPIASNETAAGRMKNRRVEILILPR 249 >gi|326799849|ref|YP_004317668.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] gi|326550613|gb|ADZ78998.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] Length = 302 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 83/225 (36%), Gaps = 9/225 (4%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 Q++ +Q K+++ ++ + + + +K Sbjct: 52 SQHELTNAKSRVTDLEEQIAQYKSNVNSLQAALDKCLTNSGQGNANIAKLVDEINASNKY 111 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + K + L +++ L+ ++ ++ V + + + IS+ D ++ S Sbjct: 112 IQHLVNTKAKSDSLNMVLTNNLTRSLSREEMQDVDVQVLKGVVYISLSDNM---LYKSGS 168 Query: 242 SIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVL 299 P L KI +++ E + I G+TD P R+NW LS RA S Q L Sbjct: 169 YEISPAAGETLGKIAKIIMDYKEYEVLIEGNTDNVPISQKNIRNNWDLSALRASSVVQAL 228 Query: 300 M-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 GV R++ G + ++D NRR I++ + Sbjct: 229 QNDYGVDPKRLTAG-GRGEYNPIASNDTEAGRTRNRRTQIIITPK 272 >gi|290509857|ref|ZP_06549228.1| outer membrane protein [Klebsiella sp. 1_1_55] gi|289779251|gb|EFD87248.1| outer membrane protein [Klebsiella sp. 1_1_55] Length = 568 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 87/299 (29%), Gaps = 20/299 (6%) Query: 50 VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 V+W + ++ + + + D S Sbjct: 252 VLWGLGP-------SLPGSLASSAWTTWLSRHSGLSRVAGWQPGESDTEDASALPEFILP 304 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + G T + + ++ + + N+ G D+ + + + Sbjct: 305 QLPAGRGLTPRGRAWRAALAIFTLAAVAALLSSGWNNRQLLQRVGVDIARYERIAMDDYR 364 Query: 170 EENYFLPPLSKEKIL----AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR---T 222 + + L ++ +L A L + + + I V Sbjct: 365 PKASAVRVLREDAVLLDSWARNGVPLRLSLGLYHGEQIRLPLLEAIRGYVPPPPPPRPVQ 424 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281 + +I + +FD + P + L + I + GHTD+ Sbjct: 425 HVAPDVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSV---GEE 481 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + N LSL RA S + +G D + G+ R +D + NRR++I + Sbjct: 482 KANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540 >gi|325982315|ref|YP_004294717.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212] gi|325531834|gb|ADZ26555.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212] Length = 277 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 13/226 (5%) Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K+ L+ L+ + + ++ ++ + + + N + Sbjct: 56 KEAGDILDKADVALNKGENDAKVNHLAYLAKQQVAIAQETAKAKIAESVVANADVERDRI 115 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + ++ + + + + T G++I++ D +F + Sbjct: 116 LLEARTAEAEESKQQVAFDQLLIAQQQKEL--EELNAKKTERGLVITLND----VLFRTN 169 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 + + +QK+ + L T+ I GHTD + N LS RA + L Sbjct: 170 MAQLEANGVRTVQKLADFLRQYTQHKVLIEGHTDNT---GSHHYNQELSERRANAVKMAL 226 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 + SG+S DR++ G+ +D NRR++I++ D G Sbjct: 227 LNSGISNDRVAS-RGYGETLPIAGNDTAEHRQLNRRVEIILSDENG 271 >gi|254785497|ref|YP_003072926.1| OmpA family protein [Teredinibacter turnerae T7901] gi|237684013|gb|ACR11277.1| OmpA family protein [Teredinibacter turnerae T7901] Length = 305 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 10/153 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 DL +++ LS + V + I++ Q +F S+ P + Sbjct: 76 DDLLNTLNAVLSQQIG---AGMVTVSGNEDWVEIAVKSQL---LFASGSAAPSTAAQQIF 129 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++ +VLA I++ GHTD P RN +NW LS RA + +L +GV+ +R+ Sbjct: 130 NELADVLAPFENAIAVSGHTDNVPIRNQQFQNNWELSAARAVAVVNLLAYAGVAPERL-A 188 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 +G+ + ++ +ANRR+ + + + Sbjct: 189 ATGYGEFQPVADNNSAQGRAANRRVVLRIARTK 221 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 22/195 (11%), Positives = 52/195 (26%), Gaps = 1/195 (0%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK-NLMT 78 + +T N W + YADF+T+L FF+VM+ ++ + + + + + + T Sbjct: 3 RRTPVETKINHERWLVSYADFVTLLFGFFVVMYSVSQVSETKYRTLSETLSGAFSGAVQT 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + N ++ + + I V + + + + Sbjct: 63 PPTNLPRTALVAPDDLLNTLNAVLSQQIGAGMVTVSGNEDWVEIAVKSQLLFASGSAAPS 122 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + + D + + N + L A Sbjct: 123 TAAQQIFNELADVLAPFENAIAVSGHTDNVPIRNQQFQNNWELSAARAVAVVNLLAYAGV 182 Query: 199 ISSTLSGLVADNIVK 213 L+ Sbjct: 183 APERLAATGYGEFQP 197 >gi|117622532|ref|YP_851445.1| hypothetical protein APECO1_1739 [Escherichia coli APEC O1] gi|237707752|ref|ZP_04538233.1| MbhA protein [Escherichia sp. 3_2_53FAA] gi|115511656|gb|ABI99730.1| putative motility protein MbhA [Escherichia coli APEC O1] gi|226898962|gb|EEH85221.1| MbhA protein [Escherichia sp. 3_2_53FAA] gi|323958690|gb|EGB54391.1| OmpA family protein [Escherichia coli H263] Length = 261 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 94/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL I I GHTDA ++N +NW LS DRA SA +VL ++G+ E+++ ++S A Sbjct: 141 PVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225 >gi|85711329|ref|ZP_01042388.1| Outer membrane protein and related peptidoglycan-associated(lipo)proteins [Idiomarina baltica OS145] gi|85694830|gb|EAQ32769.1| Outer membrane protein and related peptidoglycan-associated(lipo)proteins [Idiomarina baltica OS145] Length = 188 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 10/152 (6%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + + + GV I + + F S+ VL+ Sbjct: 43 AIGNYMDKQEEAFRDELSGSGVQVIRDGDNIRLQL---PGNITFASESANISQNFYPVLE 99 Query: 254 KIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + VL + I GHTD++ A N +LSL+RA + L+ GV R++ Sbjct: 100 DVAAVLNKYNKTTMMIEGHTDST---GSADYNQQLSLNRANAVRNYLVGYGVDSRRVTT- 155 Query: 313 SGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 GF + +D NRR+++ + Q Sbjct: 156 QGFGESQPIATNDTAQGRQQNRRVELRIIPNQ 187 >gi|322383007|ref|ZP_08056837.1| MotS-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153030|gb|EFX45490.1| MotS-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 254 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 11/194 (5%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 + S + + + A +++ ++L + + + + +++ Sbjct: 65 SMNSGVSGQNMPPKSTVGEITDKKTKERQAAAADMERKEKELQDILKTVQAYIEENHLEA 124 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 + + G+ +++ D +FD + PE VL K+ + ISI GHTD Sbjct: 125 QIAVGNSERGVSVTLKD---LFLFDLGKAELKPEAYPVLNKLASLFPTLDTKISIEGHTD 181 Query: 274 ASPF--RNIARDNWRLSLDRAYSAYQVLMKS---GVSEDRISKISGFAHHRLKIASDP-- 326 P + +DNW LS R+ S + +S+ + +G+A +D Sbjct: 182 NIPVRTGSPFQDNWGLSNARSLSVLRYFTTKADPKISDSKFMS-TGYADTIPVAPNDSME 240 Query: 327 MNSANRRIDILVED 340 + NRR++I++ Sbjct: 241 NRAKNRRVEIVILR 254 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 46/106 (43%), Gaps = 2/106 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N W + YAD +T+L+AFF++M+ ++ D + + + Q + K + Sbjct: 3 RRSKKPEEHVNHERWLVTYADLITLLLAFFVIMYAMSKVDVNKYEVLAQSLSLQFKESNS 62 Query: 79 --ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + QN P +S+ +I + + D++ + Sbjct: 63 ILSMNSGVSGQNMPPKSTVGEITDKKTKERQAAAADMERKEKELQD 108 >gi|77165990|ref|YP_344515.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707] gi|76884304|gb|ABA58985.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707] Length = 319 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 90/304 (29%), Gaps = 28/304 (9%) Query: 57 TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116 + AI F P + T++ D + E G Sbjct: 14 MKNKKTMAIMAIFTPLLLAVYTSALAEDDHPLYAPYKGWPPCAVMTGEGDMAPDGRSVTG 73 Query: 117 ----------STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 +++ + + E + + L + D Sbjct: 74 VICRSTLFIPDSDKDGVPDDKDQCPNTPPGVEVDEVGCPLDSDNDGVPDYLDQCPDTPMG 133 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + E+ + + + + +++S L D+ GV + Sbjct: 134 VEVGEDGCPLDSDGDGVPDYLDQCPDTPMGVEVNSQGCPLSVDSDGDGVPDDIDECPDTA 193 Query: 227 SIIDQRNTPM-----------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 +D F S+ P +L K+ E + + I+I GHTD+ Sbjct: 194 YGVDVDEVGCPKPVVLEDGVHFGFDSAKLSPNAHTILDKVVENMRTYPDLEITIAGHTDS 253 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332 + A N RLS RA +A L G+ R+ I G+ R ++ + NR Sbjct: 254 T---GNADYNQRLSQLRAEAAMNYLASKGIDPSRMEAI-GYGEERPIASNSTKEGRAKNR 309 Query: 333 RIDI 336 R+++ Sbjct: 310 RVEL 313 >gi|237742260|ref|ZP_04572741.1| outer membrane protein [Fusobacterium sp. 4_1_13] gi|256845531|ref|ZP_05550989.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2] gi|294785172|ref|ZP_06750460.1| OmpA family protein [Fusobacterium sp. 3_1_27] gi|229429908|gb|EEO40120.1| outer membrane protein [Fusobacterium sp. 4_1_13] gi|256719090|gb|EEU32645.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2] gi|294486886|gb|EFG34248.1| OmpA family protein [Fusobacterium sp. 3_1_27] Length = 212 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 52/146 (35%), Gaps = 10/146 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A ++I++ F S+ L I + L Sbjct: 74 DNQERELKAKLQGTQAQVRKDGNALVINL---PGGVTFASDSANISSGFYSALNGIAQSL 130 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + E I + G+TD + N LS RA + Q L+ GV+ +RI +GF Sbjct: 131 NNYPETRIQVNGYTDNT---GKDAHNQELSQRRANAVAQYLIAQGVASNRIVA-NGFGSS 186 Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342 ++ NRR++I + Q Sbjct: 187 NPVASNSTQEGRLQNRRVEIKILPAQ 212 >gi|300936146|ref|ZP_07151085.1| OmpA family protein [Escherichia coli MS 21-1] gi|300458724|gb|EFK22217.1| OmpA family protein [Escherichia coli MS 21-1] Length = 307 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + +I L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271 >gi|162450713|ref|YP_001613080.1| ompA family outer membrane protein [Sorangium cellulosum 'So ce 56'] gi|161161295|emb|CAN92600.1| omp A family outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 578 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 88/274 (32%), Gaps = 12/274 (4%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 G + D + I S N V T+ ++ Sbjct: 306 AGVGTRMSGGYAPDFRGVALVGGSFGIADSDARSPGFNYVITAEKDTDGDGYPDVIDLCP 365 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS-KEKILAMKRKK 190 + +Q + G + D ++++ E+ Sbjct: 366 EDPEDGKQPKPSDGCPDMPDRDGDGIPDVVDKCPDDPEDKDGIDDRDGCPEEDADQDGIP 425 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +D K + + I I+ Q F+ SS LP++ Sbjct: 426 DAEDKCPKEPGQVVVEDPEKNGCPFYIRRITGSAEIEIMKQVE---FEFDSSRILPQSYP 482 Query: 251 VLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L ++ +L + E+ SI GHTD N RL+ +RA + L+ GV +R Sbjct: 483 ILDEVVRLLKANPEIKLLSIEGHTDNQ---GTIDYNDRLAHNRAIAVRVYLINKGVQSER 539 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 ++ I G+ R +++D NRR++ ++ Sbjct: 540 LTSI-GYGSRRPLLSNDTPEGRQRNRRVEFHIKS 572 >gi|197106951|ref|YP_002132328.1| OmpA family protein [Phenylobacterium zucineum HLK1] gi|196480371|gb|ACG79899.1| OmpA family protein [Phenylobacterium zucineum HLK1] Length = 221 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 10/216 (4%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + + + ++ ++ G + N + I A Sbjct: 13 LAVGACTTTDPYTGQTVRSNTRTGILAGAAGGALLGYLTNTNKSEEGRTNALIGAGVGAL 72 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + + L + GV E I++++ F S Sbjct: 73 AGGAVGAYMDRQQAELRRELAGSGVEVERRGDDIVLNMPSDVT---FGVDQSDVQSRFYP 129 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 VL I L+ + I + GH D++ N LS RA S L+ GV +DR+ Sbjct: 130 VLDDIAATLSRYPQTLIDVAGHADST---GADAYNQALSERRASSVASYLVSRGVLQDRL 186 Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 + G+ R ++ + NRR++I V +G Sbjct: 187 Y-VVGYGESRPVASNATEQGRAQNRRVEITVRPFRG 221 >gi|238796916|ref|ZP_04640420.1| Flagellar motor protein [Yersinia mollaretii ATCC 43969] gi|238719176|gb|EEQ10988.1| Flagellar motor protein [Yersinia mollaretii ATCC 43969] Length = 320 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 3/195 (1%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVAD 209 +K +++ + + K+ K + L+ +K+ + + Sbjct: 40 GDKSSVSDSPIPGGGDDLMKQDGEVLKQTLAKMDKQKNAQNLRRAHEKLENLIKKDPRLS 99 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 + + T G+LI IID + PMF S P ++LQ + VL I++ Sbjct: 100 DFQSNLRLSLTDDGLLIQIIDSQERPMFKVGSRELEPYMRIILQALVPVLNDLPNKINLT 159 Query: 270 GHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 GHTD+ P+ N NW LS DRA ++ + L+ G+++++ ++ G A Sbjct: 160 GHTDSLPYVNGEAGYSNWELSSDRANASRRTLVSGGLADNKFLRVIGSADMMNLANVKSD 219 Query: 328 NSANRRIDILVEDRQ 342 NRRI ILV + Sbjct: 220 APINRRISILVLSKN 234 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 MT +MAFFLVMW+++++ ++ I YF K M+ +P + + Sbjct: 1 MTAMMAFFLVMWLLSSSTPLQREQIADYFKMPLKLAMSHGDKSSVSDSPIPGGGDDLMKQ 60 Query: 101 SID 103 + Sbjct: 61 DGE 63 >gi|237744199|ref|ZP_04574680.1| outer membrane protein [Fusobacterium sp. 7_1] gi|256027684|ref|ZP_05441518.1| Outer membrane protein [Fusobacterium sp. D11] gi|260494220|ref|ZP_05814351.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33] gi|289765644|ref|ZP_06525022.1| outer membrane protein [Fusobacterium sp. D11] gi|229431428|gb|EEO41640.1| outer membrane protein [Fusobacterium sp. 7_1] gi|260198366|gb|EEW95882.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33] gi|289717199|gb|EFD81211.1| outer membrane protein [Fusobacterium sp. D11] Length = 212 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 10/146 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A + ++I++ F S+ L I + L Sbjct: 74 DNQERELKAKLQGTQAQVKKEGNALVINL---PGGVTFASDSANISSGFYSALNGIAQSL 130 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + E I + G+TD + N LS RA + Q L+ GVS RI +GF Sbjct: 131 NNYPETRIQVNGYTDNT---GKDAHNQELSQRRANAVAQYLIAQGVSSSRIIA-NGFGSS 186 Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342 ++ + NRR++I + Q Sbjct: 187 NPIASNSTPDGRLQNRRVEIKILPAQ 212 >gi|119357472|ref|YP_912116.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354821|gb|ABL65692.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266] Length = 229 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 10/142 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 D V+G E GI + + +F+ SS + ++K+ +LA Sbjct: 82 QAAEIDRNVEGAEVERIGEGIRVVF---DSGILFNTGSSAITSTSRYNIEKLAGILAKYD 138 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I GHTD+ N LS +RA S +L GVS R+S I G+ R Sbjct: 139 DTNLIIEGHTDSV---GSDSMNQTLSENRAQSVANLLKAYGVSSSRLSAI-GYGESRPIA 194 Query: 323 ASDPMNSA--NRRIDILVEDRQ 342 +++ + NRR+++L+ Sbjct: 195 SNETESGRRLNRRVEVLITANN 216 >gi|238894412|ref|YP_002919146.1| putative outer membrane protein [Klebsiella pneumoniae NTUH-K2044] gi|238546728|dbj|BAH63079.1| putative outer membrane protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 568 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 85/299 (28%), Gaps = 20/299 (6%) Query: 50 VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 V+W + ++ + + + D S Sbjct: 252 VLWGLGP-------SLPGSLASSAWTTWLSRHSGLSRVAGWQPGESDTGDASALPEFILP 304 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + G T + ++ + + N+ G D+ + + + Sbjct: 305 QLPAGRGLTPRGWAWRAALAIFTLAAVAALLSSGWNNRQLLQRVGVDIARYERIAMDDYR 364 Query: 170 EENYFLPPLSKEKIL----AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR---T 222 + + L ++ L A L + + + I V Sbjct: 365 PKASAVRVLREDAALLDSWARNGVPLRLSLGLYHGEQIRLPLLEAIRGYVPPPPPPRPVQ 424 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281 + +I + +FD + P + L + I + GHTD+ Sbjct: 425 HVAPDVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSV---GEE 481 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + N LSL RA S + +G D + G+ R +D + NRR++I + Sbjct: 482 KANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540 >gi|113868899|ref|YP_727388.1| outer membrane protein peptidoglycan-associated(lipo)proteins [Ralstonia eutropha H16] gi|113527675|emb|CAJ94020.1| outer membrane protein peptidoglycan-associated(lipo)proteins [Ralstonia eutropha H16] Length = 212 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 + FD S+ P VL ++ + L +V ++ GHTD++ N +LS Sbjct: 102 PSQVTFDTDSATIKPSFRSVLDQVAQTLGQHQDVSANVVGHTDST---GNPNYNMQLSQR 158 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 RA S L GV+ +R++ G + + + NRR++I ++ QG Sbjct: 159 RAQSVAGYLGDRGVARNRLTA-EGRGQSQPVADNGTEAGRAQNRRVEIFLKPIQG 212 >gi|194438259|ref|ZP_03070351.1| putative chemotaxis protein [Escherichia coli 101-1] gi|297521341|ref|ZP_06939727.1| hypothetical protein EcolOP_27134 [Escherichia coli OP50] gi|194422923|gb|EDX38918.1| putative chemotaxis protein [Escherichia coli 101-1] Length = 256 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N DNW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 196 DQMLLDSKNPQSAGNRRIEIMVLTK 220 >gi|218698824|ref|YP_002406453.1| hypothetical protein ECIAI39_0419 [Escherichia coli IAI39] gi|218368810|emb|CAR16558.1| flagellar system protein [Escherichia coli IAI39] Length = 261 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 92/205 (44%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPSKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L + Sbjct: 81 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVEFA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225 >gi|304393260|ref|ZP_07375188.1| OmpA/MotB domain protein [Ahrensia sp. R2A130] gi|303294267|gb|EFL88639.1| OmpA/MotB domain protein [Ahrensia sp. R2A130] Length = 343 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 116/349 (33%), Gaps = 34/349 (9%) Query: 18 KKKVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 + + D+ + + D T+L+A +M++++ + Q + L Sbjct: 4 RSRRRGSDSVSYWPG----FVDALSTLLLA---IMFLLSVFVLAQF-LLSQEISGKDTVL 55 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 + I + K DL + + ++ ++ + + + Sbjct: 56 NRLNSQINELTQLLALEQSAKQDLEDQIATLSSGLSTAESERSRLQELLSSGSGVAEEAE 115 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKST---DLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 ++ S + + + + ++ K+ L + + ++ Sbjct: 116 TRASGLSETLDEERKVSRRAMSQVALLNQQISALRKQIASLEDALDVSETRDRESSTKIA 175 Query: 194 DLAKKISSTLSGLVADNIV---------KGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 DL ++++ L+ V + + +L ++ ++ +F + Sbjct: 176 DLGRRLNVALAQRVQELNRFRSDFFGRLRDILGARDDIRVVGDRFVFQSEVLFPSGGATL 235 Query: 245 LPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYS 294 + + K+ L V+ + GHTD P DNW LS RA S Sbjct: 236 NEAGLGEMAKLANALIELGEEIPDEIDWVLRVDGHTDNIPLSGSGRYADNWELSSGRATS 295 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 + L+ GV +R+ GF + D + NRRI++ + ++ Sbjct: 296 VVKYLITQGVPAERLVAA-GFGEFQPLEDVDTQEARDRNRRIELKLTEK 343 >gi|324115583|gb|EGC09522.1| OmpA family protein [Escherichia coli E1167] Length = 261 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 201 DQMLLDSKNPQSAGNRRIEIMVLTK 225 >gi|209745374|gb|ACI70994.1| putative motility protein [Escherichia coli] Length = 261 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSINTIARDAHMEANLEMEIVPQGLRVQIKDDQNRNMFERGSAQIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225 >gi|170761206|ref|YP_001787972.1| chemotaxis motB protein [Clostridium botulinum A3 str. Loch Maree] gi|169408195|gb|ACA56606.1| chemotaxis protein MotB [Clostridium botulinum A3 str. Loch Maree] Length = 247 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ D + +N+ V + GI+I + D +F+ + P++ Sbjct: 88 RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306 ++ KI ++A + I GHTD P +N NW LS RA + + ++ + Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204 Query: 307 DRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 R + G+ +R ++ + NRR++I++ ++ Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANKAKNRRVNIVIVSKE 241 >gi|294085848|ref|YP_003552608.1| flagellar motor protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292665423|gb|ADE40524.1| flagellar motor protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 389 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 95/261 (36%), Gaps = 21/261 (8%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 D N + ++ I S+ N + ++ + Sbjct: 126 QSDTETALNDAQKNLAEREEQLHIVEGTLAIADARAKTDSQTIDNLKAETNASRAEIAQM 185 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-------- 212 T+ ++ + L++++ A K K + +L K +++ L+ V + Sbjct: 186 TNALAALKAQLESLQNLLAEKEAQATKDKIAIANLGKSLNNALASRVQELQRFRSEFFGR 245 Query: 213 -KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HST 263 + +L I+ ++ +F + + K+ LA Sbjct: 246 LRDILKGRNDVQIVGDRFVFQSEVLFAPGQADIGDSGREQMTKLAVALAEIAREIPDDIN 305 Query: 264 EVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 V+ + GHTD P R DNW LS +RA S + L+ G+ +R+ +G+ H+ I Sbjct: 306 WVLQVDGHTDDIPIRAGRYADNWDLSTERALSVVRFLISQGLPPNRL-AATGYGEHQPLI 364 Query: 323 ASDPMNSA--NRRIDILVEDR 341 + ++ NRRI++ + R Sbjct: 365 NENSEDARQKNRRIELKITQR 385 >gi|260450574|gb|ACX40996.1| OmpA/MotB domain protein [Escherichia coli DH1] gi|323943350|gb|EGB39503.1| OmpA family protein [Escherichia coli E482] Length = 261 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 201 DQMLLDSKNPQSAGNRRIEIMVLTK 225 >gi|301643541|ref|ZP_07243583.1| OmpA family protein [Escherichia coli MS 146-1] gi|307136895|ref|ZP_07496251.1| hypothetical protein EcolH7_02026 [Escherichia coli H736] gi|301078041|gb|EFK92847.1| OmpA family protein [Escherichia coli MS 146-1] gi|315616807|gb|EFU97424.1| lateral flagellar motor protein B [Escherichia coli 3431] Length = 307 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 115/341 (33%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRDRGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + KI L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L + +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 271 >gi|163796351|ref|ZP_02190312.1| OmpA/MotB [alpha proteobacterium BAL199] gi|159178493|gb|EDP63035.1| OmpA/MotB [alpha proteobacterium BAL199] Length = 561 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 100/299 (33%), Gaps = 15/299 (5%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + T++ T+ + + K + D + + + + L+ T+ Sbjct: 267 LTETNEATRARLAELAEALKKADSRVVRLETDLSEQRDVTKKLEARLAEQTERTR-LAQS 325 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 ++ + + + E +++ + S + + I Sbjct: 326 ELEQRDIRLEELFSEQERTQQKLTEEQKISAESSRQVELLNAQIAALRQQLARIEAALEA 385 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQ 231 +K+ + +RL L+ ++ + + R + I Sbjct: 386 TETQNRDQKVQILDLGRRLNAALATKVQELARFRSEFFGRLREVLSDRDDVRIVGDRFVF 445 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRNI-AR 282 ++ +F S+ V L + L ++ + GHTD P N R Sbjct: 446 QSEVLFGSGSAQIGEPGKVKLGQFAATLREIAPRIPKNIGWILQVEGHTDTVPIHNEQFR 505 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 NW LS RA S + L+ G+ +R+S +G+ ++ +D NRRI++ + R Sbjct: 506 SNWELSAARAISVVKYLVDQGIPAERLSA-TGYGEYQPIDPADLE--RNRRIEMKLTQR 561 >gi|56460671|ref|YP_155952.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Idiomarina loihiensis L2TR] gi|56179681|gb|AAV82403.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Idiomarina loihiensis L2TR] Length = 208 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + GV + + + F S+ VL + Sbjct: 67 YMDKQEEEFREELADSGVKVIRDGDNLRLQLPSNIT---FATGSANISQSFNPVLDDVAR 123 Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + I GHTD++ A N +LSL+RA + L+ +GV R++ G+ Sbjct: 124 VLKKYEKTTMLIEGHTDST---GSAEYNQQLSLNRANAVRNNLVGNGVDSRRVTT-EGYG 179 Query: 317 HHRLKIASDPMNSA--NRRIDILV 338 +D + NRR+++ + Sbjct: 180 ESMPVADNDTESGRQLNRRVELRI 203 >gi|331666564|ref|ZP_08367438.1| putative motility protein [Escherichia coli TA271] gi|331065788|gb|EGI37672.1| putative motility protein [Escherichia coli TA271] Length = 307 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 115/341 (33%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + K S T E + E +P + Sbjct: 106 K----------ARDVNEKTVLLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + +I L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKRLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L + +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 271 >gi|309786020|ref|ZP_07680649.1| lateral flagellar motor protein B [Shigella dysenteriae 1617] gi|308926131|gb|EFP71609.1| lateral flagellar motor protein B [Shigella dysenteriae 1617] Length = 307 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------SRDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + +I L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271 >gi|293408386|ref|ZP_06652225.1| conserved hypothetical protein [Escherichia coli B354] gi|291471564|gb|EFF14047.1| conserved hypothetical protein [Escherichia coli B354] Length = 307 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------ARDLNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + +I L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271 >gi|303248961|ref|ZP_07335208.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ] gi|302489684|gb|EFL49620.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ] Length = 261 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 9/168 (5%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 K + A++ +++ Q+L + ++ L + + + R + I+ +D+ Sbjct: 50 ADERKAEARAVELERKTQELQTAYDALVADLRGEVDSRDIRVRQFREKLEINFVDK---I 106 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAY 293 +F S+ P +L+K+G VLA + I + GHTD++P + NW LS R+ Sbjct: 107 LFASGSAEITPRGREILRKVGGVLAKVKDKSIYVVGHTDSNPIHSALYPSNWELSTARSA 166 Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 S + L GV+ +R + + G A ++ ++ NRR+DI+V Sbjct: 167 SVIRFLSESGGVTPERFTAM-GRAFYQPVASNATPEGRHENRRVDIIV 213 >gi|237653594|ref|YP_002889908.1| flagellar motor protein MotD [Thauera sp. MZ1T] gi|237624841|gb|ACR01531.1| OmpA/MotB domain protein [Thauera sp. MZ1T] Length = 279 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 70/178 (39%), Gaps = 7/178 (3%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + + P + + ++ +R++ Q + L V G+ + Sbjct: 77 VPSQAITRPAPPAVDPVVEQRRQQAAQRMRNVADEIRRVLSPLTGSGQVKVTEGAFGVSV 136 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNW 285 I +F + + LQ + VLA + I++ GHTD P NW Sbjct: 137 EINASL---LFAPGEAALGSNAVSALQAVARVLAPAEFPITVEGHTDNVPISTFRFPSNW 193 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 LS RA + ++ + +GV+ R++ G+A R + + NRR+ IL+E R Sbjct: 194 ELSAVRASTVARLFIDNGVTPARLTAA-GYADQRPVADNADEEGRGRNRRVTILIESR 250 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 62/172 (36%), Gaps = 2/172 (1%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 ++++ +D+ +N W + YADF+T+L AFF+VM+ +++ ++ + + +N+ Sbjct: 1 MRRRRKLDEEHDNHERWLVSYADFITLLFAFFVVMYSLSSVNEGKYRVLSDSLVQAFRNV 60 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 G ++ P+ S ++ + V + ++ + LS Sbjct: 61 NVNESG--EQIVLPKVSVVPSQAITRPAPPAVDPVVEQRRQQAAQRMRNVADEIRRVLSP 118 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 S K + + N + ++LA Sbjct: 119 LTGSGQVKVTEGAFGVSVEINASLLFAPGEAALGSNAVSALQAVARVLAPAE 170 >gi|94311700|ref|YP_584910.1| OmpA/MotB [Cupriavidus metallidurans CH34] gi|93355552|gb|ABF09641.1| outer membrane protein, OmpA/MotB family(modular protein) [Cupriavidus metallidurans CH34] Length = 294 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 7/111 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 + FD SS P VL ++ + LA +V ++ GHTD++ + N +LS Sbjct: 184 PSQVTFDTDSSTIKPSFRNVLDQVAQTLAQHQDVSANVVGHTDST---GNPQYNMQLSQR 240 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 RA S L GV+ R+S G + + + NRR++I ++ Sbjct: 241 RAQSVAGYLGDRGVARTRLSA-EGRGQTQPVADNSTEAGRAQNRRVEIFLK 290 >gi|126665323|ref|ZP_01736305.1| hypothetical protein MELB17_22060 [Marinobacter sp. ELB17] gi|126629951|gb|EBA00567.1| hypothetical protein MELB17_22060 [Marinobacter sp. ELB17] Length = 348 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 110/353 (31%), Gaps = 32/353 (9%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMW----------IINATDDD----- 60 +I + T N + + +++ F+++ ++ + + Sbjct: 1 MIGSRRRSRSTTNVWPGYVDALS--ALLMLVIFMLLVYVVSQLFLSQTLSDRNSELARLN 58 Query: 61 -TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119 + Q + + QN S +L +++ + + Sbjct: 59 LRLSELSQLLGLEQGTTAALEQQMLIVQNSFSDSLAENENLQQQLEASRDQLMRQTADAE 118 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + + N + + + ++ + + ++ ++ + Sbjct: 119 ARAENLADMNQELGNKDELSNSQQTMIMRLSNQIAALQNQLRQITAALRLQKEMTVDQED 178 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + K ++ + L + ++ S + + +L I+ + +F Sbjct: 179 ELKSVSRRLNTMLAERINQLEQYQSEFFSRL--RNILAANENIRIVGDRFLLPSELLFAS 236 Query: 240 SSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290 S++ E L K+ VL A ++ I GHTD P NW LS Sbjct: 237 GSALLGAEGKRELDKLAGVLLDVVETIPADLEWILRIDGHTDRIPINTPQFPSNWELSTA 296 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 RA + + L V ++R+ GF + NRRI+I + DR Sbjct: 297 RAVAVVRYLADQSVPQNRMVAA-GFGEFFPVADGTTPEALQENRRIEIKLTDR 348 >gi|115373807|ref|ZP_01461100.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca DW4/3-1] gi|115369206|gb|EAU68148.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca DW4/3-1] Length = 663 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 85/268 (31%), Gaps = 21/268 (7%) Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 + + G Q P++ D + + + Sbjct: 401 ADKCPQTPGAASAQGCPDQDGDGIQDSEDKCPAAAGNAAGQGCPDKDGDGIDDASDRCPA 460 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 + + + C K D + ++++++ E + Sbjct: 461 EAGPAERQGCPI-------------KDADNDGVLDEQDSCPNEAGLPELKGCPAKDADND 507 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 LA + + + + + I I+ + FD ++S + +L Sbjct: 508 TLADHLDNCPNEAGPVDNQGCPAKQKQLVAIRQDRIEIKEAVYFDSNASTIQARSNGLLD 567 Query: 254 KIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++ ++L E++S+ GHTD A N LS RA + L+K GV+ +R+ Sbjct: 568 QMAKLLNEHPEIVSVLIEGHTDDR---GAADYNRTLSKQRADTVRDYLVKKGVAAERLET 624 Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDIL 337 G+ R + NRR+D L Sbjct: 625 -QGYGPDRPVQPNTTAAGRTANRRVDFL 651 >gi|213024875|ref|ZP_03339322.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 189 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 2/143 (1%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 S + + + + G+ I IID +N PMF S+ P +L+ I VL Sbjct: 7 IESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNG 66 Query: 262 STEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 IS+ GHTD P+ N NW LS DRA ++ + L+ G+ ++ ++ G A Sbjct: 67 IPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATM 126 Query: 320 LKIASDPMNSANRRIDILVEDRQ 342 P ++ NRRI +LV ++Q Sbjct: 127 RLSDRGPDDAINRRISLLVLNKQ 149 >gi|170756344|ref|YP_001782268.1| chemotaxis motB protein [Clostridium botulinum B1 str. Okra] gi|169121556|gb|ACA45392.1| chemotaxis protein MotB [Clostridium botulinum B1 str. Okra] Length = 247 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ D + +N+ V + GI+I + D +F+ + P++ Sbjct: 88 RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306 ++ KI ++A + I GHTD P +N NW LS RA + + ++ + Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204 Query: 307 DRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 R + G+ +R ++ + NRR++I++ ++ Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANKAKNRRVNIVIVSKE 241 >gi|331640759|ref|ZP_08341894.1| putative motility protein [Escherichia coli H736] gi|331037557|gb|EGI09777.1| putative motility protein [Escherichia coli H736] Length = 318 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 115/341 (33%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 12 MRKTGNRRDRGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 71 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 72 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 116 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 117 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 166 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + KI L+ + P+FD Sbjct: 167 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 203 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 204 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 241 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L + +P ++ NRRI+I+V + Sbjct: 242 EAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 282 >gi|322433005|ref|YP_004210254.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] gi|321165232|gb|ADW70936.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] Length = 309 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 2/168 (1%) Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRN 233 +K +K L L K + + + + + + K + T G+ I +++ Sbjct: 73 TEGKESKKEEKESKKDDLAALKKDLMRAIEKIDSLNRLKKQIEMTVTEEGLRIELVEDAK 132 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRA 292 F+ SS P P +L+ + E L ISI GHTDA P+ NW LS DRA Sbjct: 133 GTFFETGSSKPTPALEEILKVLSEQLKSLPNSISIEGHTDAQPYATATVYGNWELSTDRA 192 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 A + + ++G+ D++S++ GFA RL + P++++NRRI ++V++ Sbjct: 193 NVARREMQENGIRTDQVSQVRGFADQRLHVPEKPLDASNRRISLVVQN 240 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + Q II+ K ++ G+WK+ YADF+T +M+ F+V+W++++T T++ I YF Sbjct: 3 DELQPIIVI-KKKGAHGGHHGGAWKVAYADFVTAMMSLFIVLWLMSSTSKQTQEEIAGYF 61 Query: 70 NPFGKNLMTASK 81 N Sbjct: 62 NDPKGTSTKHGT 73 >gi|73540381|ref|YP_294901.1| OmpA [Ralstonia eutropha JMP134] gi|72117794|gb|AAZ60057.1| OmpA [Ralstonia eutropha JMP134] Length = 212 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 + FD S+ P VL ++ + L +V+ ++ GHTD++ A+ N +LS Sbjct: 102 PSQVTFDTDSATIKPSFRSVLDQVAQTLGQHQDVVANVVGHTDST---GNAQYNMQLSQR 158 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 RA S L GV+ +R+S G + + NRR++I ++ QG Sbjct: 159 RAQSVATYLGDRGVARNRLSA-EGRGQTQPVADNATEAGRTQNRRVEIFLKPIQG 212 >gi|326334458|ref|ZP_08200670.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693425|gb|EGD35352.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 455 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 78/280 (27%), Gaps = 16/280 (5%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F G + S GI + + D K + + Sbjct: 176 FQQDGTDYFQHSAGIVIKFGAKDTDKDGIPDNKDACPEVKGLKEFNGCPDTDGDGIPDKD 235 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP--PLSKEKILAM 186 + + ++ C ++ D C K N + P +K + Sbjct: 236 DACPEVKGLKEFNGCPDTDGDGIPDKDDACPDVPGLKEFNGCPDTDGDGVPDKDDKCPDV 295 Query: 187 KRKKRL-------QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 D + + T +FD Sbjct: 296 AGPAENGGCPWPDTDGDGVLDKDDLCPNEAGSASNKGCPEPNDDDQKRLNQYAKTILFDT 355 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + ++ VL +I VL I GHTD++ N LS +RA + Sbjct: 356 GKATIKFQSADVLNQIISVLNKFPNSRFRIEGHTDST---GKKAKNQVLSQNRADAVKVY 412 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L++ G+ +R+ + G+ + ++ NRR++I Sbjct: 413 LIQGGIDANRLESV-GYGQDKPIASNKTKKGRELNRRVEI 451 >gi|330961246|gb|EGH61506.1| flagellar motor protein MotD [Pseudomonas syringae pv. maculicola str. ES4326] Length = 265 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 69/201 (34%), Gaps = 8/201 (3%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 +L + K + + P L + + D + I+ + Sbjct: 49 SQALVGVFNDTERTMKPIPIGEQRPVSVKPAEPLLKDSEQTDAGIGQASDDPLQTIAQDV 108 Query: 204 SGLVADNIV-KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 D + + + I + +F ++P + +++K+ ++ Sbjct: 109 RDAFGDLLKSDQMTVRGNELWVEIELNSSM---LFGSGDAMPSDKAFSIIEKVSGIVKRF 165 Query: 263 TEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I + G TD P NW LS R+ S ++L GV+ R++ + G+ + Sbjct: 166 DNPIHVEGFTDDQPINTSQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPI 224 Query: 322 IASDPM--NSANRRIDILVED 340 + + NRR+ +++ Sbjct: 225 APNTTAAGRAKNRRVVLVISR 245 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 3 RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSQALVGVFNDTERT 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 K I + P S + + + ++ + + Q + + L S Q Sbjct: 63 MKPIPIGEQRP--VSVKPAEPLLKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLLKSDQ 120 >gi|260597724|ref|YP_003210295.1| hypothetical protein CTU_19320 [Cronobacter turicensis z3032] gi|260216901|emb|CBA30471.1| hypothetical protein CTU_19320 [Cronobacter turicensis z3032] Length = 520 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 60/167 (35%), Gaps = 9/167 (5%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ---RNT 234 L ++ +L + +++ + + + + + + ++ SI + Sbjct: 332 LKRDALLLERWQRQGEPQRYGLGLYNGQRLWLALQQAIDSYVSQPTPRDSIPHTVRLDSL 391 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAY 293 +FD P + VL + I + GHTD R N +LSL RA Sbjct: 392 SLFDTGQWRLKPGSTKVLVNALVGIKAKPGWLIVVAGHTDDV---GDERANQQLSLKRAE 448 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 S + +G + + G+ R + + NRR++I + Sbjct: 449 SVRDWMRDTGDVPESCFAVQGYGESRPAAPNTTTQGRALNRRVEISL 495 >gi|170681840|ref|YP_001742391.1| hypothetical protein EcSMS35_0284 [Escherichia coli SMS-3-5] gi|170519558|gb|ACB17736.1| lateral flagellar motor protein B [Escherichia coli SMS-3-5] Length = 307 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 117/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H +K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPSKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + +I L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271 >gi|59889800|emb|CAH19156.1| Lateral flagellar motor protein B (MotB-like) [Escherichia coli] gi|284920064|emb|CBG33121.1| lateral flagellar motor protein B (MotB-like) [Escherichia coli 042] Length = 307 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAAPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + +I L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271 >gi|330861237|emb|CBX71488.1| hypothetical protein YEW_CQ10830 [Yersinia enterocolitica W22703] Length = 89 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 47/86 (54%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +N I++KK+ A ++ GSWKI YADFMT +MAFFLVMW+++ + I + Sbjct: 2 KHQNHPVILVKKRKAKHGQAHHGGSWKIAYADFMTAMMAFFLVMWLLSVSSPQELTQIAE 61 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERS 93 YF K +++ + D +P Sbjct: 62 YFRTPLKVALSSGEKSSDSTSPIPGG 87 >gi|331645436|ref|ZP_08346540.1| putative motility protein [Escherichia coli M605] gi|331045598|gb|EGI17724.1| putative motility protein [Escherichia coli M605] Length = 318 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 116/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 12 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 71 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 72 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 116 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 117 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 166 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + KI L+ + P+FD Sbjct: 167 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 203 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 204 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 241 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 242 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 282 >gi|325525470|gb|EGD03283.1| flagellar motor protein MotB [Burkholderia sp. TJI49] Length = 201 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 91/246 (36%), Gaps = 51/246 (20%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + D+ I++K+ A ++ G+WK+ YADFMT +MAFFL+MW+++A K I +Y Sbjct: 3 KSKDRAIVVKRV-APQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN K + S ++ D SI ++ + G+ + L Sbjct: 62 FNTPLKAALFGS------------GDRSSQDSSIINGGGRDLSSVDAGTLRRTDGTTPLA 109 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + + L + Sbjct: 110 ERVAKPVDEA-------------------------------------AQAQLQGALERRE 132 Query: 189 KKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + RL DL K+ + + + + ++T G+ I I+D + PMF SS P Sbjct: 133 QARLHDLQIKLMAAIEANPTLRQFKQQIRIDSTLLGLRIEIVDTQKRPMFAMSSDRVEPY 192 Query: 248 TIVVLQ 253 +L+ Sbjct: 193 MRDILR 198 >gi|157157459|ref|YP_001461420.1| hypothetical protein EcE24377A_0264 [Escherichia coli E24377A] gi|157159714|ref|YP_001457032.1| hypothetical protein EcHS_A0258 [Escherichia coli HS] gi|191165724|ref|ZP_03027563.1| putative chemotaxis protein [Escherichia coli B7A] gi|157065394|gb|ABV04649.1| putative chemotaxis protein [Escherichia coli HS] gi|157079489|gb|ABV19197.1| putative chemotaxis protein [Escherichia coli E24377A] gi|190904231|gb|EDV63941.1| putative chemotaxis protein [Escherichia coli B7A] gi|320176694|gb|EFW51731.1| Flagellar motor rotation protein MotB [Shigella dysenteriae CDC 74-1112] gi|323169560|gb|EFZ55232.1| lateral flagellar motor protein B [Shigella sonnei 53G] Length = 256 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 196 DQMLLDSKNPQSAGNRRIEIMVLTK 220 >gi|331671822|ref|ZP_08372618.1| putative motility protein [Escherichia coli TA280] gi|331070811|gb|EGI42170.1| putative motility protein [Escherichia coli TA280] Length = 318 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 117/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 12 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 71 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H +K + T + Sbjct: 72 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPSKPATVAVPEETEK 116 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 117 K----------ARDLNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 166 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + +I L+ + P+FD Sbjct: 167 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 203 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 204 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 241 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 242 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 282 >gi|218703545|ref|YP_002411064.1| hypothetical protein ECUMN_0293 [Escherichia coli UMN026] gi|300899473|ref|ZP_07117721.1| OmpA family protein [Escherichia coli MS 198-1] gi|218430642|emb|CAR11508.1| flagellar system protein [Escherichia coli UMN026] gi|300356952|gb|EFJ72822.1| OmpA family protein [Escherichia coli MS 198-1] Length = 307 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 117/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKIRPSHPPKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K + N + + K S T E + E +P + Sbjct: 106 K----------AHDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + +I L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271 >gi|194290514|ref|YP_002006421.1| outer membrane lipoprotein [Cupriavidus taiwanensis LMG 19424] gi|193224349|emb|CAQ70360.1| putative outer membrane lipoprotein [Cupriavidus taiwanensis LMG 19424] Length = 212 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 + FD S+ P VL ++ + L+ +V ++ GHTD++ N +LS Sbjct: 102 PSQVTFDTDSATIKPSFRSVLDQVAQTLSQHQDVSANVVGHTDST---GNPNYNMQLSQR 158 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 RA S L GV+ +R+S G + + + NRR++I ++ QG Sbjct: 159 RAQSVAGYLGDRGVARNRLSA-EGRGQSQPVADNGTEAGRAQNRRVEIFLKPIQG 212 >gi|215485380|ref|YP_002327811.1| hypothetical protein E2348C_0225 [Escherichia coli O127:H6 str. E2348/69] gi|215263452|emb|CAS07773.1| flagellar system protein MbhA [Escherichia coli O127:H6 str. E2348/69] Length = 261 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 94/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPTHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSINTIVRDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA +++ +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225 >gi|347159|gb|AAC36902.1| protein F [Pseudomonas fluorescens] Length = 317 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 83/278 (29%), Gaps = 9/278 (3%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 K IE +NP + + N + D + ++ I ++ + + Sbjct: 42 KHIEDGYNPGASIGYFITDDVSVNLNYDTTNHTRSNDGTGNQKIKGDTGSVTAQYHFGQA 101 Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 R + S+ + RD + N + Sbjct: 102 GVDSLRPYVEGGFGHQSRTNVQADGHSGRDQSTLAIAGAGVKYYFTNNLFARAGVESDYN 161 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + A + ++ FD Sbjct: 162 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 221 Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ P + ++ + + +A + + GHTD+ N +LS RA + QVL Sbjct: 222 KSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSI---GPDAYNQKLSQRRADAVKQVL 278 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 +K GV+ RI+ + G+ R + NRR++ Sbjct: 279 VKDGVAPSRITAV-GYGESRPVADNATEAGRAVNRRVE 315 >gi|30061847|ref|NP_836018.1| hypothetical protein S0298 [Shigella flexneri 2a str. 2457T] gi|56479639|ref|NP_706230.2| hypothetical protein SF0277 [Shigella flexneri 2a str. 301] gi|110804360|ref|YP_687879.1| hypothetical protein SFV_0301 [Shigella flexneri 5 str. 8401] gi|30040091|gb|AAP15824.1| putative motility protein [Shigella flexneri 2a str. 2457T] gi|56383190|gb|AAN41937.2| putative motility protein [Shigella flexneri 2a str. 301] gi|110613908|gb|ABF02575.1| putative motility protein [Shigella flexneri 5 str. 8401] gi|281599639|gb|ADA72623.1| putative motility protein [Shigella flexneri 2002017] Length = 261 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLYNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225 >gi|15615801|ref|NP_244105.1| flagellar motor protein MotS [Bacillus halodurans C-125] gi|10175862|dbj|BAB06958.1| BH3239 [Bacillus halodurans C-125] Length = 250 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 77/209 (36%), Gaps = 10/209 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 Q + + + L + D E P + + ++ + DL Sbjct: 40 DAQKFRAIAESFQQRQVFEFLPSAIDFESPKEDRGEERKEPFDEGEYGDEQKDEV--DLD 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + ++ L + + + + G+++ + +Q +F+ + LP L K+G Sbjct: 98 ELLAEVEEFLEENELTEQISATRDDRGVVLILQEQ---ALFETGEAEVLPGARPFLDKVG 154 Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314 ++ ++ + GHTD P NW LS RA S + ++ V R +G Sbjct: 155 TLVELIPNIVKVEGHTDNRPISTYRYPSNWELSGARASSVIRYIIDHHNVDPSRFIA-TG 213 Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341 F R + + NRR+ I++ D Sbjct: 214 FGDTRPVVPNTTEENLQQNRRVIIVISDP 242 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 55/144 (38%), Gaps = 3/144 (2%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K++ + W + ++D MT+++ FF++++ ++ D +AI + F Sbjct: 1 MKRRKRQPEK--GAPRWMVTFSDLMTLILVFFILLFSMSVVDAQKFRAIAESFQQRQVFE 58 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 S F+ +R + K E+ + ++ + + + EN + + Sbjct: 59 FLPSAIDFE-SPKEDRGEERKEPFDEGEYGDEQKDEVDLDELLAEVEEFLEENELTEQIS 117 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKS 160 + + + + ++ + Sbjct: 118 ATRDDRGVVLILQEQALFETGEAE 141 >gi|311696643|gb|ADP99516.1| flagellar motor protein MotB [marine bacterium HP15] Length = 277 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 8/200 (4%) Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 + +S + E P E+ + + + S + L Sbjct: 66 ADDIGGSPLTMIESETVSLPEPTESQTREPEFIDERAEGVAPTQIPGGVIDLASRMIREL 125 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 ++ + + + ++I ++ F + PE I +++++ VL+ T + Sbjct: 126 ESEVASEALSVNYDQNQVVIRFSEEAT---FRSGEAAIKPEMIPIIERVVNVLSACTGDV 182 Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS 324 + G+TD P + NW LS RA S L+ V DR+ G A + Sbjct: 183 LVSGYTDDRPISSDRYRSNWDLSAARAVSVVHELVMNRQVPADRVVAA-GRAETNPLAPN 241 Query: 325 DP--MNSANRRIDILVEDRQ 342 D + NRR++I + + + Sbjct: 242 DSPENRALNRRVEIAIRNPE 261 >gi|323171084|gb|EFZ56733.1| lateral flagellar motor protein B [Escherichia coli LT-68] Length = 307 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 116/341 (34%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + +I L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAQIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271 >gi|294491414|gb|ADE90170.1| putative chemotaxis protein [Escherichia coli IHE3034] gi|307628268|gb|ADN72572.1| hypothetical protein UM146_16065 [Escherichia coli UM146] gi|323953128|gb|EGB48996.1| OmpA family protein [Escherichia coli H252] Length = 256 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 94/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL I I GHTDA ++N +NW LS DRA SA +VL ++G+ E+++ ++S A Sbjct: 136 PVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220 >gi|4580970|gb|AAD24557.1|AF117965_1 OprF [Pseudomonas marginalis pv. marginalis] Length = 321 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 86/278 (30%), Gaps = 9/278 (3%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 K IE FNP + + + + + + D + ++ I ++ L + Sbjct: 45 KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGNQKIKGDTGSLVAQYHFGQA 104 Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 R + S+ + RD + + N + Sbjct: 105 GVDSLRPYVEGGFGHQSRTNVQADGHSGRDQTTFATVGTGVKYYFTNNLYARAGVEADYG 164 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + A + ++ FD Sbjct: 165 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 224 Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 ++ P + ++ + + +A + + GHTD+ N +LS RA + QVL Sbjct: 225 KAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAVKQVL 281 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 +K GV+ R++ + G+ R + NRR++ Sbjct: 282 VKDGVAPSRVTAV-GYGESRPVADNATEAGRAVNRRVE 318 >gi|323976251|gb|EGB71344.1| OmpA family protein [Escherichia coli TW10509] gi|327254574|gb|EGE66190.1| lateral flagellar motor protein B [Escherichia coli STEC_7v] Length = 307 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 115/341 (33%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 61 ERESIIAALH---------------GQSIFNGGGLSPLNKISPTHPLKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + KI L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKSNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 231 DAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271 >gi|347163|gb|AAA62423.1| protein F [Pseudomonas fluorescens] Length = 317 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P + ++ + + +A + + GHTD+ N +LS RA + Sbjct: 218 FDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAV 274 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 QVL+K GV+ R++ + G+ R + NRR++ Sbjct: 275 KQVLVKDGVAPSRVTAV-GYGESRPVADNATEAGRAVNRRVE 315 >gi|221640526|ref|YP_002526788.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131] gi|221161307|gb|ACM02287.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131] Length = 228 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + L V T + +++++ +F S+ P+ L + + Sbjct: 89 LDRQAADLRNSIGNSQVSVTNTGSELVVTMPQD---ILFATDSANLRPDLQRDLGAVAQN 145 Query: 259 LAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + GHTD++ A N LS+ RA S VL+ +GV R+S I G Sbjct: 146 LLRYPNSTIAVVGHTDST---GSAAYNQDLSMRRAQSVAGVLIGNGVPSYRVSAI-GRGE 201 Query: 318 HRLKIASDP--MNSANRRIDILVE 339 + ++ + NRR+DI++ Sbjct: 202 DQPIASNLTPEGRAQNRRVDIIIR 225 >gi|320643247|gb|EFX12446.1| hypothetical protein ECO9389_21954 [Escherichia coli O157:H- str. 493-89] gi|320648894|gb|EFX17512.1| hypothetical protein ECO2687_10031 [Escherichia coli O157:H- str. H 2687] Length = 256 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVQIKDDQNRNMFERGSAQIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220 >gi|170021342|ref|YP_001726296.1| hypothetical protein EcolC_3350 [Escherichia coli ATCC 8739] gi|188495907|ref|ZP_03003177.1| lateral flagellar motor protein B [Escherichia coli 53638] gi|169756270|gb|ACA78969.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739] gi|188491106|gb|EDU66209.1| lateral flagellar motor protein B [Escherichia coli 53638] Length = 307 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 115/341 (33%), Gaps = 70/341 (20%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M G++ + I+++++ + ++ G+WK+ +ADF +MA F+ +WI+N+ Sbjct: 1 MRKTGNRRDRGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +++I + Q+ + ++ H K + T + Sbjct: 61 ERESIIAALH---------------GQSIFSGGGLSPLNKISPSHPPKPATVAVPEETEK 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K N + + K S T E + E +P + Sbjct: 106 K----------ARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLR 155 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 I + + + + KI L+ + P+FD Sbjct: 156 VLIKDDQNRNMFERGSAKIMPFFKTLLVELA-----------------------PVFDSL 192 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + + ++ G + LS R VL Sbjct: 193 DNKIIITGHTDAMAYKNNI---YNNWNLSG-------------DRALSARR------VLE 230 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 231 EAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 271 >gi|347161|gb|AAC36903.1| protein F [Pseudomonas tolaasii] Length = 317 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 86/278 (30%), Gaps = 9/278 (3%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 K IE FNP + + + + + + D + ++ I ++ L + Sbjct: 42 KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGNQKIGGDTGSLTAQYHFGQA 101 Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 R + S+ + RD + N + Sbjct: 102 GVDSLRPYVEGGFGHQSRSNVEADGHKGRDQSTLAIAGAGVKYYFTNNLYARAGVEADYA 161 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + A + ++ FD Sbjct: 162 IDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 221 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ P + ++ + + + + ++ GHTD+ N +LS RA + QVL Sbjct: 222 KSVVKPNSYGDVKNLADFMKQYPQTTTVVEGHTDSV---GPDAYNQKLSQRRADAVKQVL 278 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 +K G++ +R+S + G+ R + NRR++ Sbjct: 279 VKDGIAPNRVSSV-GYGKSRPVADNATEAGRAINRRVE 315 >gi|226949496|ref|YP_002804587.1| chemotaxis MotB protein [Clostridium botulinum A2 str. Kyoto] gi|226843238|gb|ACO85904.1| chemotaxis MotB protein [Clostridium botulinum A2 str. Kyoto] Length = 254 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 11/162 (6%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 ++ +++++ K+ + V G+ I I D +F+ + Sbjct: 83 DSVTEDIKMKEIKSKLEKEIEKS---GYSDKVKVGVDADGLEIDIQD---VVLFNSGDAE 136 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK- 301 L ++ +L++I ++L I + GHTD P N R NW LS RA + L Sbjct: 137 VLKQSSALLKQISKMLKGLDNNIKVTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNI 196 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 G+S +++ I + + K + + NRR++I + + Sbjct: 197 GGISANKL-SIQAYGEYMPKFNNATEAGRAKNRRVEISIVRK 237 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 48/121 (39%), Gaps = 3/121 (2%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W I Y+D +T+L+A F+VM+ ++ D + Q FN K Sbjct: 2 KKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKA---G 58 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S + + + + + + +T++ +I S +K+ + ++ + Sbjct: 59 SNVLQEGGGGGASVGKAGVSIVPSDSVTEDIKMKEIKSKLEKEIEKSGYSDKVKVGVDAD 118 Query: 140 S 140 Sbjct: 119 G 119 >gi|312962474|ref|ZP_07776965.1| Outer membrane porin F [Pseudomonas fluorescens WH6] gi|311283401|gb|EFQ61991.1| Outer membrane porin F [Pseudomonas fluorescens WH6] Length = 326 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 88/283 (31%), Gaps = 9/283 (3%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 K IE FNP + + + + + + D + ++ I ++ L + Sbjct: 45 KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGNQKIKGDTGSLVAQYHFGQA 104 Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 R + S+ + RD + + N + Sbjct: 105 GVDSLRPYVEGGFGHQSRTNVQADGHSGRDQTTFATVGTGVKYYFTNNLYARAGVEADYG 164 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + A + ++ FD Sbjct: 165 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 224 Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 ++ P + ++ + + +A + + GHTD+ N +LS RA + QVL Sbjct: 225 KAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAVKQVL 281 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 +K GV+ R++ + G+ R + NRR++ VE Sbjct: 282 VKDGVAPSRVTAV-GYGESRPVADNATEAGRAVNRRVEASVEA 323 >gi|34763092|ref|ZP_00144063.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887226|gb|EAA24326.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 202 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 52/146 (35%), Gaps = 10/146 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A ++I++ F S+ L I + L Sbjct: 64 DNQERELKAKLQGTQAQVRKDGNALVINL---PGGVTFASDSANISSGFYSALNGIAQSL 120 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + E I + G+TD + N LS RA + Q L+ GV+ +RI +GF Sbjct: 121 NNYPETRIQVNGYTDNT---GKDAHNQELSQRRANAVAQYLIAQGVASNRIVA-NGFGSS 176 Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342 ++ NRR++I + Q Sbjct: 177 NPVASNSTQEGRLQNRRVEIKILPAQ 202 >gi|325923680|ref|ZP_08185304.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas gardneri ATCC 19865] gi|325545846|gb|EGD17076.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas gardneri ATCC 19865] Length = 407 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 19/252 (7%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 +E + G + + + + + + + D D Sbjct: 161 EEEFDATPNPVSPGQQKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPQED 220 Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV-----LF 217 + +P + + G+ + Sbjct: 221 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPASQPGQTI 280 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 + +SI FD + S P+ +L + E+L + + + GHTD+ Sbjct: 281 GPDGCPVPVSI--DLKGVNFDFNKSTLRPDAQSILSEATEILKRYPDLKVEVAGHTDS-- 336 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328 + N +LS RA + Y L K+GV R+ G+ R + Sbjct: 337 -KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNANPDGSDNPEGR 395 Query: 329 SANRRIDILVED 340 + NRR ++ V++ Sbjct: 396 AKNRRTELNVQN 407 >gi|242238952|ref|YP_002987133.1| flagellar motor protein MotB [Dickeya dadantii Ech703] gi|242131009|gb|ACS85311.1| OmpA/MotB domain protein [Dickeya dadantii Ech703] Length = 377 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 4/216 (1%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 L+ + + S + + + + + Sbjct: 50 PSQLAQIAEYFRTPLKIAITSGPKMSDASNPIPGGGADPTHQEGDVSRQIDTMDGRLEEI 109 Query: 191 RLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +L L +++ + + +L E G+ I IID N PMF S+ P Sbjct: 110 KLNKLRERLDQLIEADPRLRALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMS 169 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L+ I +L IS+ GHTD + + NW LS DRA ++ + L+ G++E Sbjct: 170 DILRAIAPILNDIPNKISLSGHTDDARYATGERGYSNWELSADRANASRRELIAGGLTEG 229 Query: 308 RISKISGFAHH-RLKIASDPMNSANRRIDILVEDRQ 342 ++ ++ G A LK A D ++ NRRI ++V ++Q Sbjct: 230 KVLRVVGMADTMNLKQAKDGSDAINRRISLVVLNKQ 265 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 34/107 (31%), Positives = 50/107 (46%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 Q II+KK ++ GSWKI YADFMT +MA FLVMW+I + I +YF Sbjct: 2 KHQHPIIRKKRKSGHAAHHGGSWKIAYADFMTAMMALFLVMWLIAISSPSQLAQIAEYFR 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 K +T+ + D NP + D +++D ++ Sbjct: 62 TPLKIAITSGPKMSDASNPIPGGGADPTHQEGDVSRQIDTMDGRLEE 108 >gi|206970743|ref|ZP_03231695.1| putative chemotaxis protein MotB [Bacillus cereus AH1134] gi|218233445|ref|YP_002366413.1| flagellar motor protein MotS [Bacillus cereus B4264] gi|218896660|ref|YP_002445071.1| putative chemotaxis protein MotB [Bacillus cereus G9842] gi|296502310|ref|YP_003664010.1| flagellar motor protein MotS [Bacillus thuringiensis BMB171] gi|206734379|gb|EDZ51549.1| putative chemotaxis protein MotB [Bacillus cereus AH1134] gi|218161402|gb|ACK61394.1| putative chemotaxis protein MotB [Bacillus cereus B4264] gi|218544664|gb|ACK97058.1| putative chemotaxis protein MotB [Bacillus cereus G9842] gi|296323362|gb|ADH06290.1| flagellar motor protein MotS [Bacillus thuringiensis BMB171] Length = 225 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 82/228 (35%), Gaps = 9/228 (3%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + ++ F + + L K + + + + Sbjct: 2 SKGPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTGQVDAKVMEN 61 Query: 178 LSKEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + +K + + ++ L V +N + V TG+ + I+D + Sbjct: 62 TIPDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---I 118 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295 FD + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 119 FDTGDANVKPEAKGIISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANM 178 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 179 IHHLIEVYNVDDKRLAAV-GYADTKPIVPNDSPQNWEKNRRVVIYIKE 225 >gi|149375283|ref|ZP_01893054.1| OmpA/MotB domain protein [Marinobacter algicola DG893] gi|149360319|gb|EDM48772.1| OmpA/MotB domain protein [Marinobacter algicola DG893] Length = 355 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 82/253 (32%), Gaps = 15/253 (5%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 +E + + + S + E S + + + Sbjct: 104 EEEKARRLEQQYNAEAQALRVEDLGKAIASAESELEDEEQLTASQRAIILQLSNQISALQ 163 Query: 163 LEKSINKEENYFLPPLSKEKILAMKRK-KRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + S L+ EK ++ KRL L + + L ++ + Sbjct: 164 DQLSRITAALRLQEDLTAEKEAELEEVGKRLNTLLAERVNELERYQSEFFGRLRDILQDN 223 Query: 222 TGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGH 271 I I + +F S+ PE L K+ EVL ++ I GH Sbjct: 224 ENIRIVGDRFLLPSELLFASGSARLGPEGQRELDKLAEVLLDVVAAIPEDIDWILRIDGH 283 Query: 272 TDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS- 329 TD P A NW LS RA + + L GV ++R+ GF + + Sbjct: 284 TDRIPINTEAFPSNWELSTARAVAVVRYLASEGVPQNRMVAA-GFGEFFPVASGGSAEAL 342 Query: 330 -ANRRIDILVEDR 341 NRRI+I + DR Sbjct: 343 RQNRRIEIKLTDR 355 >gi|120610159|ref|YP_969837.1| hypothetical protein Aave_1472 [Acidovorax citrulli AAC00-1] gi|120588623|gb|ABM32063.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1] Length = 452 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 70/179 (39%), Gaps = 10/179 (5%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + ++ ++ M + ++ L + + + V Sbjct: 252 NYRLASRSDELFAAINAIRLPKMPSVVAVAPPKPRLRQFLEPEIREGL---VEVNDQADR 308 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR- 282 ++++ R +FD +S+ P + V+Q+I L + + + G++D P R Sbjct: 309 SIVTL---RGDGLFDPASTEVKPRYVAVIQRIASALNEVSGKVVVNGYSDNQPIRTARFP 365 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 NW LS +RA + +L ++ R+ + G A + + NRR++I++ Sbjct: 366 SNWHLSQERAQAVAAMLQRTIADGSRL-RAEGRAESDPIAPNSTPEGRALNRRVEIVLM 423 >gi|281177445|dbj|BAI53775.1| putative motility protein [Escherichia coli SE15] Length = 262 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 22 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 81 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 82 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 141 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 142 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 201 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 202 DQMLLDAKNPQSAGNRRIEIMVLTK 226 >gi|104780466|ref|YP_606964.1| OmpA family outer membrane protein [Pseudomonas entomophila L48] gi|95109453|emb|CAK14154.1| putative outer membrane protein; OmpA family [Pseudomonas entomophila L48] Length = 262 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 72/220 (32%), Gaps = 11/220 (5%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + ++ + + D + + + + + + + A Sbjct: 39 QSDPQSSKVAALETKDAQDWLNKADKAYMERENEKKVDQLAYLTNQRVEVAKQTIALRTA 98 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K + + + + T G L++ D +FD + + Sbjct: 99 EAELKNAAAQRAQAKLDARDAQIKKLQDSLNAKQTDRGTLVTFGD----VLFDFNKANLK 154 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + K+ + L + E I G+TD+ A N LS RA S L+++GV Sbjct: 155 GSAYPNITKLAQFLQENPERKVIIEGYTDSV---GSANYNQTLSERRANSVRMALVRAGV 211 Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 RI G+ + + + NRR+++ + + Sbjct: 212 DPARIVA-QGYGKEYPVADNTSNSGRAQNRRVEVTISNDN 250 >gi|82775833|ref|YP_402180.1| hypothetical protein SDY_0484 [Shigella dysenteriae Sd197] gi|81239981|gb|ABB60691.1| putative motility protein [Shigella dysenteriae Sd197] Length = 259 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 19 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKSRDVNEKTALLKKKSATELG 78 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 79 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 138 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 139 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 198 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 199 DQMLLDAKNPQSAGNRRIEIMVLTK 223 >gi|299066021|emb|CBJ37202.1| putative outer membrane lipoprotein [Ralstonia solanacearum CMR15] Length = 209 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD S++ P L + E L+ E ++ GHTD++ N LS Sbjct: 99 PSQVSFDTDSAVIKPSFRGPLDSVAETLSQHPELAANVVGHTDST---GNPNYNMSLSQR 155 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 RA S L GV+ R+S G + + + NRR++I ++ QG Sbjct: 156 RAQSVASYLTDRGVARTRLSA-EGRGQTQPVGDNATEAGRAQNRRVEIYLKPIQG 209 >gi|256024126|ref|ZP_05437991.1| hypothetical protein E4_12175 [Escherichia sp. 4_1_40B] gi|300947286|ref|ZP_07161489.1| OmpA family protein [Escherichia coli MS 116-1] gi|301019019|ref|ZP_07183235.1| OmpA family protein [Escherichia coli MS 196-1] gi|299882424|gb|EFI90635.1| OmpA family protein [Escherichia coli MS 196-1] gi|300453087|gb|EFK16707.1| OmpA family protein [Escherichia coli MS 116-1] gi|315134915|dbj|BAJ42074.1| putative motility protein [Escherichia coli DH1] Length = 256 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 196 DQMLLDSKNPQSAGNRRIEIMVLTK 220 >gi|77361745|ref|YP_341320.1| lipoprotein [Pseudoalteromonas haloplanktis TAC125] gi|76876656|emb|CAI87878.1| putative lipoprotein [Pseudoalteromonas haloplanktis TAC125] Length = 209 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + + GV + + + F S L I Sbjct: 67 DYMDKQETAFRDELAGSGVEVVREGDNLRLVMPSNIT---FATDQSYISSGFHNTLSAIA 123 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +V+ +S+ GHTD++ N LS RA S L+ + +RIS +G+ Sbjct: 124 KVMNKYEKTYLSVEGHTDST---GKDSYNMSLSQQRAQSVKNYLVNQQIMAERIST-TGY 179 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 R ++D + NRR++I + Sbjct: 180 GETRPISSNDSANGRAQNRRVEIQI 204 >gi|332185595|ref|ZP_08387343.1| rickettsia 17 kDa surface antigen family protein [Sphingomonas sp. S17] gi|332014573|gb|EGI56630.1| rickettsia 17 kDa surface antigen family protein [Sphingomonas sp. S17] Length = 225 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 11/169 (6%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 +++ + A + + L A V +L+++ + F Sbjct: 61 TEKILGAGIGGLAGAGIGAYMDKQERDLRARTAGTDVQVVRQGDDLLLNL---PSGITFA 117 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 SS P+ L ++ ++L+ + I + GHTD++ N LS RA + Sbjct: 118 YDSSTVQPQFRQTLDQVADILSQYKQTYIDVYGHTDST---GSDSYNQALSERRAVAVAD 174 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED-RQG 343 L GV RI GF + ++D +ANRR++I + R+G Sbjct: 175 YLASRGVQPARIGT-RGFGKSQPIASNDTDAGRAANRRVEIKIVPIREG 222 >gi|124007829|ref|ZP_01692531.1| outer membrane protein [Microscilla marina ATCC 23134] gi|123986775|gb|EAY26556.1| outer membrane protein [Microscilla marina ATCC 23134] Length = 715 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 7/130 (5%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273 + I++ + N FD S + L ++ + + + + GHTD Sbjct: 590 IKRNLYLAPIIVGQKIRLNNLFFDVGKSALKSSSFAELNRLVNSMKNYPNMTIEVSGHTD 649 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSAN 331 A N +LS DRA + L G+ R+ G+ + + + N Sbjct: 650 AQ---GSPAKNLQLSKDRANAVLNYLKSKGIPASRMQA-KGYGQTKPLATNGTAQGRARN 705 Query: 332 RRIDILVEDR 341 RR++ ++ + Sbjct: 706 RRVEFMILKK 715 >gi|15799935|ref|NP_285947.1| hypothetical protein Z0291 [Escherichia coli O157:H7 EDL933] gi|15829511|ref|NP_308284.1| hypothetical protein ECs0256 [Escherichia coli O157:H7 str. Sakai] gi|291281074|ref|YP_003497892.1| putative motility protein [Escherichia coli O55:H7 str. CB9615] gi|293413506|ref|ZP_06656155.1| hypothetical protein ECDG_00047 [Escherichia coli B185] gi|331651164|ref|ZP_08352189.1| putative motility protein [Escherichia coli M718] gi|12513001|gb|AAG54555.1|AE005201_8 putative motility protein [Escherichia coli O157:H7 str. EDL933] gi|13359714|dbj|BAB33680.1| putative motility protein [Escherichia coli O157:H7 str. Sakai] gi|209745376|gb|ACI70995.1| putative motility protein [Escherichia coli] gi|209745378|gb|ACI70996.1| putative motility protein [Escherichia coli] gi|209745380|gb|ACI70997.1| putative motility protein [Escherichia coli] gi|209745382|gb|ACI70998.1| putative motility protein [Escherichia coli] gi|290760946|gb|ADD54907.1| Putative motility protein [Escherichia coli O55:H7 str. CB9615] gi|291433564|gb|EFF06537.1| hypothetical protein ECDG_00047 [Escherichia coli B185] gi|323938776|gb|EGB35022.1| OmpA family protein [Escherichia coli E1520] gi|331050905|gb|EGI22957.1| putative motility protein [Escherichia coli M718] Length = 261 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225 >gi|226950064|ref|YP_002805155.1| chemotaxis motB protein [Clostridium botulinum A2 str. Kyoto] gi|226842943|gb|ACO85609.1| chemotaxis motB protein [Clostridium botulinum A2 str. Kyoto] Length = 247 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 8/158 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ D + +N+ V + GI+I + D +F+ + P++ Sbjct: 88 RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306 ++ KI +++A + I GHTD P +N NW LS RA + + ++ + Sbjct: 145 KQIMDKINDLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 R + G+ +R ++ S NRR++I++ ++ Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANRSKNRRVNIVIVSKE 241 >gi|302392384|ref|YP_003828204.1| OmpA/MotB domain protein [Acetohalobium arabaticum DSM 5501] gi|302204461|gb|ADL13139.1| OmpA/MotB domain protein [Acetohalobium arabaticum DSM 5501] Length = 248 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 8/155 (5%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + +L + S L + + E T G+ I +FD + + + Sbjct: 84 MPELNRINQKITSYLQEQELEDEIKVEMTERGLTIRFT---GKVLFDIGRATIKEDAYSI 140 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRI 309 L KI +++ I + GHTD P N NW LS RA + ++ ++ ++ Sbjct: 141 LDKISGIISEVPNQIMVEGHTDNLPISNSRFPSNWELSTARATEVVKYFIEENSITPAKL 200 Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 S G++ ++ +D + NRR+D+++ R+ Sbjct: 201 SAA-GYSKYKPVKPNDSPENRALNRRVDVILLKRE 234 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 45/121 (37%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 ++K ++ ++ +W Y D MT+L+AFF++++ ++ D + + + L Sbjct: 3 RRKKRRNNDESDDSNWLTTYGDMMTLLLAFFVLLYSFSSVDVQKFRNVVEALQGNLGVLK 62 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + +N ++ K + L+ + + + E + Sbjct: 63 GGKTISSSDLITAGVRDENLGMPELNRINQKITSYLQEQELEDEIKVEMTERGLTIRFTG 122 Query: 138 Q 138 + Sbjct: 123 K 123 >gi|294852539|ref|ZP_06793212.1| outer membrane protein [Brucella sp. NVSL 07-0026] gi|294821128|gb|EFG38127.1| outer membrane protein [Brucella sp. NVSL 07-0026] Length = 258 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 10/150 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A GV I++++ FD + L + Sbjct: 89 NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 145 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + + + G TD++ A N LS RA S L G+ R + G+ Sbjct: 146 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-AVIGY 201 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR++I + +G Sbjct: 202 GASQPIASNATPEGRAQNRRVEIQISPLRG 231 >gi|261418451|ref|YP_003252133.1| flagellar motor protein MotB [Geobacillus sp. Y412MC61] gi|319767588|ref|YP_004133089.1| OmpA/MotB domain protein [Geobacillus sp. Y412MC52] gi|261374908|gb|ACX77651.1| OmpA/MotB domain protein [Geobacillus sp. Y412MC61] gi|317112454|gb|ADU94946.1| OmpA/MotB domain protein [Geobacillus sp. Y412MC52] Length = 259 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 10/208 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q+ ++ D + ++E + K K+ L + Sbjct: 47 QEIARAFSTAFAGGTGVLDFQSPIEPITPPAQDEEGRHQAKQPSPAVNGKEKEELGQIKA 106 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 KI S + + + + T G+ I+I+D +FD S+ + + +I Sbjct: 107 KIDSYIHD---NKLTGKLQTSLTDEGLAITILDD---ILFDSGSAEVRMKDRRLAAEISA 160 Query: 258 VL-AHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + I I GHTD P N NW LS+ RA + +VL+++ + R G+ Sbjct: 161 LLVMNPPRNIIISGHTDNVPIHNEKFASNWELSVMRAVNFMKVLLENKQLDPRYFSAKGY 220 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDR 341 ++ ++ NRR++IL+ R Sbjct: 221 GEYKPIASNATAAGRMKNRRVEILILPR 248 >gi|331661626|ref|ZP_08362549.1| putative motility protein [Escherichia coli TA143] gi|331060048|gb|EGI32012.1| putative motility protein [Escherichia coli TA143] Length = 261 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225 >gi|163789638|ref|ZP_02184076.1| chemotaxis motB protein [Carnobacterium sp. AT7] gi|159875170|gb|EDP69236.1| chemotaxis motB protein [Carnobacterium sp. AT7] Length = 249 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 8/153 (5%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 +L K + + L NI E + GI ++I + +F S+I L Sbjct: 98 ELLKMYNEVVQFLEDKNITSQASVEYDQDGIYVNIQES---ILFGSGSAIIADSGKQTLN 154 Query: 254 KIGEVLAHSTEVISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISK 311 +GE++ + I G+TD P + NW LS RA S + L + V+ R+ Sbjct: 155 DLGELIQKFDNAVVIEGYTDNVPMYNANFSSNWELSTGRALSVLRYLSEERDVNPTRL-A 213 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 G+ + + +D S NRR++I++ Q Sbjct: 214 AKGYGEYHPLVPNDSEENRSKNRRVNIVIVYDQ 246 >gi|222032078|emb|CAP74817.1| Protein mbhA [Escherichia coli LF82] Length = 261 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPSKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ E+++ ++S A Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225 >gi|213962352|ref|ZP_03390615.1| outer membrane protein OmpA family P60 [Capnocytophaga sputigena Capno] gi|213955018|gb|EEB66337.1| outer membrane protein OmpA family P60 [Capnocytophaga sputigena Capno] Length = 360 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 7/124 (5%) Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNI 280 ++ I T +FD S+ P+ +L I ++ + + + GHTD + Sbjct: 240 QRVVKQINLYAKTILFDTDKSVVKPQAEFILDNIAIIMNENPDFNFVVEGHTDNT---GT 296 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 N +LS DRA + Q L + GVS+ R+ G+ R ++D NRR++I V Sbjct: 297 PEHNLKLSQDRADAIKQYLSRHGVSKKRLEA-KGYGQTRPIESNDTERGKEINRRVEINV 355 Query: 339 EDRQ 342 Q Sbjct: 356 IKDQ 359 >gi|83310388|ref|YP_420652.1| hypothetical protein amb1289 [Magnetospirillum magneticum AMB-1] gi|82945229|dbj|BAE50093.1| Flagellar motor protein [Magnetospirillum magneticum AMB-1] Length = 333 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 111/326 (34%), Gaps = 30/326 (9%) Query: 37 YAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQ 95 + D T++M +V ++ + + E + + Q Sbjct: 17 FVDALATLIMV--VVFLLMIFVLAQFFLGQALSGRQKALDDLGREMAALAE----KLNLQ 70 Query: 96 NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155 K + ++ + + + + Q + + + + ++ E Sbjct: 71 TKANAALQAELVSSRAEKEKLEHWAAGVQQDMAALLTLKDEKEAELAAEKKIS--DEGRA 128 Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 L + +++ +E L + ++K ++ DL K+++ L+G V + Sbjct: 129 QLALLSRQIEALKEELARVAAALDASETRDKEQKAQISDLGKRLNVALAGKVEELQKYRS 188 Query: 216 LFETTRTGIL-----ISIIDQR----NTPMFDKSSSIPLPETIVVLQKIGEVLAHST--- 263 F +L I I R + +F S+ E ++K+ + Sbjct: 189 EFFGRLRKVLGDRPGIRIEGDRFVFQSELLFATGSAELGTEGAEQVRKLAATIREINAGM 248 Query: 264 -----EVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTD P NW LS RA + + L GV DR+ +GF Sbjct: 249 PKGLNWVLRVDGHTDKRPITSGKFPSNWELSTARAITVLRALAADGVPRDRL-AAAGFGE 307 Query: 318 HRLKIASDPMN--SANRRIDILVEDR 341 + + + + NRRI+I + R Sbjct: 308 FQPVDSGNTEAAYAKNRRIEIRFDQR 333 >gi|121998797|ref|YP_001003584.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1] gi|121590202|gb|ABM62782.1| OmpA/MotB domain protein [Halorhodospira halophila SL1] Length = 242 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 6/156 (3%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 L+ L + + V + + + L +D +F+ + Sbjct: 76 EGEPSVLEGLPEPLDEADPVEVPAELEEAGIQAVGEEETLTFRLDDA--VLFETGRAELQ 133 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGV 304 E + ++ + + +S+ GHTD P NW LS RA + + L + G+ Sbjct: 134 AEGQAAIDELIPIFQATGVRLSVEGHTDNIPIATGQFPSNWELSSARASAVLRYLEEQGL 193 Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 R+ I G+ R ++ + NRR++I + Sbjct: 194 DPRRMRAI-GYGDIRPIADNETAEGRAENRRVEITL 228 >gi|296332050|ref|ZP_06874514.1| flagellar motor protein MotS [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675555|ref|YP_003867227.1| putative flagellar motor apparatus component [Bacillus subtilis subsp. spizizenii str. W23] gi|296150821|gb|EFG91706.1| flagellar motor protein MotS [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413799|gb|ADM38918.1| putative flagellar motor apparatus component [Bacillus subtilis subsp. spizizenii str. W23] Length = 236 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 75/195 (38%), Gaps = 11/195 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 D +K K S E + + + + A K++ + L KK+++ + + Sbjct: 49 DLQKFKAAVDSIQKEGGGLQPDQTSIEKKNTSPADAKKQEDQQDQLLKKVNTYIKD---N 105 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 ++ + + G+++ + + +FD + L +L +I +L I + Sbjct: 106 HLKAQMTAKRDERGVVLVLQEA---VLFDSGEAKVLKNAETLLHQIAVLLQTIPNDIQVE 162 Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM 327 GHTD+ NW LS RA Q + R + G+A + + Sbjct: 163 GHTDSRNISTYRYPSNWELSAARASGVIQYFTSKEKLPSKRFIAV-GYADTKPVKDNKTN 221 Query: 328 N--SANRRIDILVED 340 NRR++I+++ Sbjct: 222 EHMKENRRVEIVIKK 236 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 36/91 (39%), Gaps = 7/91 (7%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ ++ SW + ++D +T+++ FF++++ ++ D KA Sbjct: 10 RRNGSGKNSHSSSSWMVTFSDLITLILVFFILLFSMSQIDLQKFKAAVDSIQ-------K 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 G+ +Q E+ + + D E Sbjct: 63 EGGGLQPDQTSIEKKNTSPADAKKQEDQQDQ 93 >gi|52079917|ref|YP_078708.1| flagellar motor protein MotB [Bacillus licheniformis ATCC 14580] gi|52785288|ref|YP_091117.1| flagellar motor protein MotB [Bacillus licheniformis ATCC 14580] gi|52003128|gb|AAU23070.1| motility protein B [Bacillus licheniformis ATCC 14580] gi|52347790|gb|AAU40424.1| MotB [Bacillus licheniformis ATCC 14580] Length = 259 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 8/180 (4%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 E + E+ P +K+ A K K + Q L K + N+ K V + T G Sbjct: 73 EPKTSTTEDGKSPDQAKDLSEAQKEKDK-QSLKKIQEQVNRFIKEKNLQKQVNTKLTDEG 131 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR 282 +L+SI D FD + + I + +++ ++L + I I GHTD P RN Sbjct: 132 LLLSIEDN---IFFDSGKAEIRQQDIPLAKEVSDLLVLNPPRNIVISGHTDNVPIRNSQF 188 Query: 283 -DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 NW LS+ RA + +L+++ + +I G+ + ++D NRR++IL+ Sbjct: 189 KSNWHLSVMRAVNFMGLLIENPKLDAKIFSAKGYGEFKPIASNDTEEGRRKNRRVEILIL 248 >gi|293408320|ref|ZP_06652159.1| hypothetical protein ECEG_03255 [Escherichia coli B354] gi|291471498|gb|EFF13981.1| hypothetical protein ECEG_03255 [Escherichia coli B354] Length = 433 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + E + R MF V+ K +A Sbjct: 300 LANEIARGLLTVEEDDHHSRVIF---RGDTMFIPGQKTVNDALRPVIDKAAREIARVGGA 356 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD+ P + N LS RA +L G+ RI ++ G + Sbjct: 357 VTVTGHTDSQPIHSAEFPSNQVLSEKRAAEVASLLTSGGIPASRI-RVVGKGDTVPVADN 415 Query: 325 --DPMNSANRRIDILVED 340 + NRR++ILV + Sbjct: 416 RTKTGRAQNRRVEILVVE 433 >gi|226944750|ref|YP_002799823.1| hypothetical protein Avin_26720 [Azotobacter vinelandii DJ] gi|226719677|gb|ACO78848.1| OmpA/MotB domain protein [Azotobacter vinelandii DJ] Length = 430 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 67/226 (29%), Gaps = 10/226 (4%) Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 ++ + + +T + + F Sbjct: 207 PAALSPHWHDPVAAPPRVRRSLPVWVGAALAALLCLGLFATFQWLLAGRSDAAFAAIDQL 266 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + +++ L + D + + S++ R +FD Sbjct: 267 RLPRVLAVAPTPAAPEPRLAKLLEAEIRDGL------VRVSDEVDRSLVVLRGDGLFDSG 320 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL 299 ++ + +L +IG+ L + + + G+TD P R NW LS RA + L Sbjct: 321 AAQVIERFQPLLARIGDALNTTRGSVLVMGYTDNVPIRGLRYASNWELSQARADTVKAQL 380 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 R+ + G +D + NRR++I + G Sbjct: 381 QARLSDPGRV-RAEGRGAADPVAPNDSPANRARNRRVEITLLVPPG 425 >gi|86130870|ref|ZP_01049469.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85818281|gb|EAQ39441.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 326 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 110/303 (36%), Gaps = 20/303 (6%) Query: 53 IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 +++ K +E ++ K+ SK + + + E++ + + +D N + Sbjct: 14 LVSCVPAKKFKDLEAKYSRLRKDNRNMSKELAEAKAALEKTKEERDLALVDLDALSNKYN 73 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 G + K + + + S + ++ + ++L + Sbjct: 74 EVSGEYDAAKANLAQLQDSYNALETNSSASIAENSKKNRQLLEELESKQNDLAEKTAALE 133 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISS----------TLSGLVADNIVKGVLFETTRT 222 L + + R R+ +L I++ +S + D KG+ E Sbjct: 134 AERKRLERLQKDLADRSARVDELEGLIAAKDAKMRGLKDAISKALTDFEGKGLTVEQRDG 193 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA 281 + +S+ N +FD S ++++G VLA + E+ I GHTD P+ Sbjct: 194 KVYVSL---ENKLLFDSGSWTVGTNGTKAVKQLGSVLADNPEIAVLIEGHTDNVPYGGSG 250 Query: 282 R--DNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 NW LS RA S +L + ++ G + +D + NRRI++ Sbjct: 251 NLQGNWDLSAKRATSIVNILRQNKRIDPKNLTAA-GRGEYAPVAENDTPENKAKNRRIEV 309 Query: 337 LVE 339 ++ Sbjct: 310 ILT 312 >gi|218550065|ref|YP_002383856.1| hypothetical protein EFER_2750 [Escherichia fergusonii ATCC 35469] gi|218357606|emb|CAQ90245.1| flagellar system protein [Escherichia fergusonii ATCC 35469] Length = 296 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 92/205 (44%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 56 AALHGQSIFNGGGLSPLNKISPTHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 115 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 116 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 175 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA +++ +NW LS DRA SA +VL +G+ ED++ ++S A Sbjct: 176 PVFDSLDNKIIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEDAGMPEDKVMQVSAMA 235 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 236 DQMLLDAKNPQSAGNRRIEIMVLTK 260 >gi|75760652|ref|ZP_00740680.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228900309|ref|ZP_04064539.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222] gi|228907361|ref|ZP_04071219.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200] gi|228920439|ref|ZP_04083784.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228938842|ref|ZP_04101442.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228952108|ref|ZP_04114203.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228958007|ref|ZP_04119744.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228971723|ref|ZP_04132344.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978332|ref|ZP_04138709.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407] gi|229043482|ref|ZP_04191192.1| OmpA/MotB domain protein [Bacillus cereus AH676] gi|229069280|ref|ZP_04202570.1| OmpA/MotB domain protein [Bacillus cereus F65185] gi|229078910|ref|ZP_04211462.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2] gi|229109185|ref|ZP_04238784.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15] gi|229144340|ref|ZP_04272746.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24] gi|229149929|ref|ZP_04278157.1| OmpA/MotB domain protein [Bacillus cereus m1550] gi|229178137|ref|ZP_04305508.1| OmpA/MotB domain protein [Bacillus cereus 172560W] gi|229189825|ref|ZP_04316836.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876] gi|74491866|gb|EAO55054.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228593633|gb|EEK51441.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876] gi|228605267|gb|EEK62717.1| OmpA/MotB domain protein [Bacillus cereus 172560W] gi|228633610|gb|EEK90211.1| OmpA/MotB domain protein [Bacillus cereus m1550] gi|228639127|gb|EEK95551.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24] gi|228674195|gb|EEL29440.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15] gi|228704324|gb|EEL56758.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2] gi|228713767|gb|EEL65652.1| OmpA/MotB domain protein [Bacillus cereus F65185] gi|228725860|gb|EEL77107.1| OmpA/MotB domain protein [Bacillus cereus AH676] gi|228781349|gb|EEM29550.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407] gi|228787813|gb|EEM35771.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228801714|gb|EEM48594.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228807640|gb|EEM54164.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228820691|gb|EEM66716.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228839069|gb|EEM84365.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228852222|gb|EEM97018.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200] gi|228859344|gb|EEN03774.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222] Length = 226 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 82/228 (35%), Gaps = 9/228 (3%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + ++ F + + L K + + + + Sbjct: 3 SKGPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTGQVDAKVMEN 62 Query: 178 LSKEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + +K + + ++ L V +N + V TG+ + I+D + Sbjct: 63 TIPDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---I 119 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295 FD + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 120 FDTGDANVKPEAKGIISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANM 179 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 180 IHHLIEVYNVDDKRLAAV-GYADTKPIVPNDSPQNWEKNRRVVIYIKE 226 >gi|30019773|ref|NP_831404.1| flagellar motor protein MotS [Bacillus cereus ATCC 14579] gi|229127054|ref|ZP_04256053.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4] gi|29895318|gb|AAP08605.1| Chemotaxis motB protein [Bacillus cereus ATCC 14579] gi|228656407|gb|EEL12246.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4] Length = 226 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 82/228 (35%), Gaps = 9/228 (3%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + ++ F + + L K + + + + Sbjct: 3 SKGPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMEN 62 Query: 178 LSKEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + +K + + ++ L V +N + V TG+ + I+D + Sbjct: 63 TIPDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---I 119 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295 FD + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 120 FDTGDANVKPEAKGIISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANM 179 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 180 IHHLIEVYNVDDKRLAAV-GYADTKPIVPNDSPQNWEKNRRVVIYIKE 226 >gi|17547099|ref|NP_520501.1| hypothetical protein RSc2380 [Ralstonia solanacearum GMI1000] gi|17429400|emb|CAD16087.1| probable bacterial outer membrane transmembrane protein [Ralstonia solanacearum GMI1000] Length = 209 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD S++ P L + E L+ E ++ GHTD++ N LS Sbjct: 99 PSQVSFDTDSAVIKPSFRGPLDSVAETLSQHPELAANVVGHTDST---GNPNYNMSLSQR 155 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 RA S L GV+ +R+S G + + + NRR++I ++ QG Sbjct: 156 RAQSVASYLTDRGVARNRMSA-EGRGQTQPVGDNATEAGRAQNRRVEIYLKPIQG 209 >gi|23502081|ref|NP_698208.1| OmpA family protein [Brucella suis 1330] gi|161619159|ref|YP_001593046.1| OmpA/MotB domain-containing protein [Brucella canis ATCC 23365] gi|163843469|ref|YP_001627873.1| OmpA/MotB domain-containing protein [Brucella suis ATCC 23445] gi|225852700|ref|YP_002732933.1| OmpA/MotB domain-containing protein [Brucella melitensis ATCC 23457] gi|254701944|ref|ZP_05163772.1| OmpA family protein [Brucella suis bv. 5 str. 513] gi|254704489|ref|ZP_05166317.1| OmpA family protein [Brucella suis bv. 3 str. 686] gi|254706615|ref|ZP_05168443.1| OmpA family protein [Brucella pinnipedialis M163/99/10] gi|254710275|ref|ZP_05172086.1| OmpA family protein [Brucella pinnipedialis B2/94] gi|254714272|ref|ZP_05176083.1| OmpA family protein [Brucella ceti M644/93/1] gi|254717709|ref|ZP_05179520.1| OmpA family protein [Brucella ceti M13/05/1] gi|256031769|ref|ZP_05445383.1| OmpA family protein [Brucella pinnipedialis M292/94/1] gi|256044854|ref|ZP_05447758.1| OmpA family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256061284|ref|ZP_05451434.1| OmpA family protein [Brucella neotomae 5K33] gi|256113758|ref|ZP_05454562.1| OmpA family protein [Brucella melitensis bv. 3 str. Ether] gi|256159939|ref|ZP_05457657.1| OmpA family protein [Brucella ceti M490/95/1] gi|256255170|ref|ZP_05460706.1| OmpA family protein [Brucella ceti B1/94] gi|256369628|ref|YP_003107138.1| OmpA family protein [Brucella microti CCM 4915] gi|260168903|ref|ZP_05755714.1| OmpA family protein [Brucella sp. F5/99] gi|260565544|ref|ZP_05836028.1| bacterial outer membrane protein [Brucella melitensis bv. 1 str. 16M] gi|260566267|ref|ZP_05836737.1| bacterial outer membrane protein [Brucella suis bv. 4 str. 40] gi|261219551|ref|ZP_05933832.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1] gi|261314075|ref|ZP_05953272.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261317837|ref|ZP_05957034.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94] gi|261322046|ref|ZP_05961243.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1] gi|261752512|ref|ZP_05996221.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513] gi|261755171|ref|ZP_05998880.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686] gi|261758395|ref|ZP_06002104.1| bacterial outer membrane protein [Brucella sp. F5/99] gi|306840330|ref|ZP_07473102.1| OmpA family protein [Brucella sp. BO2] gi|306844105|ref|ZP_07476699.1| OmpA family protein [Brucella sp. BO1] gi|23348039|gb|AAN30123.1| OmpA family protein [Brucella suis 1330] gi|161335970|gb|ABX62275.1| OmpA/MotB domain protein [Brucella canis ATCC 23365] gi|163674192|gb|ABY38303.1| OmpA/MotB domain protein [Brucella suis ATCC 23445] gi|225641065|gb|ACO00979.1| OmpA/MotB domain protein [Brucella melitensis ATCC 23457] gi|255999790|gb|ACU48189.1| OmpA family protein [Brucella microti CCM 4915] gi|260151612|gb|EEW86706.1| bacterial outer membrane protein [Brucella melitensis bv. 1 str. 16M] gi|260155785|gb|EEW90865.1| bacterial outer membrane protein [Brucella suis bv. 4 str. 40] gi|260924640|gb|EEX91208.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1] gi|261294736|gb|EEX98232.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1] gi|261297060|gb|EEY00557.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94] gi|261303101|gb|EEY06598.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261738379|gb|EEY26375.1| bacterial outer membrane protein [Brucella sp. F5/99] gi|261742265|gb|EEY30191.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513] gi|261744924|gb|EEY32850.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686] gi|306275548|gb|EFM57280.1| OmpA family protein [Brucella sp. BO1] gi|306289729|gb|EFM60918.1| OmpA family protein [Brucella sp. BO2] Length = 220 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 10/150 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A GV I++++ FD + L + Sbjct: 77 NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 133 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + + + G TD++ A N LS RA S L G+ R + G+ Sbjct: 134 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-AVIGY 189 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR++I + +G Sbjct: 190 GASQPIASNATPEGRAQNRRVEIQISPLRG 219 >gi|260597012|ref|YP_003209583.1| hypothetical protein CTU_12200 [Cronobacter turicensis z3032] gi|260216189|emb|CBA29047.1| hypothetical protein CTU_12200 [Cronobacter turicensis z3032] Length = 424 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 7/137 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + + + MF ++I P+ + +++++ + Sbjct: 291 LKEEIARHWVSVDESPRESRVIFH---GDSMFSSGAAIVRPDRVDIIRRVAAEVRRVDGA 347 Query: 266 ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + I GHTD++P R N LS RA + + G++ ++I+ G + ++ Sbjct: 348 VVIIGHTDSTPIRSGAFASNQALSEKRAEAVAAYFLAQGIAPEKITP-KGAGDTQPIASN 406 Query: 325 DPM--NSANRRIDILVE 339 S NRR++I V Sbjct: 407 HDEKGRSQNRRVEIFVT 423 >gi|26246276|ref|NP_752315.1| hypothetical protein c0378 [Escherichia coli CFT073] gi|26106674|gb|AAN78859.1|AE016756_42 MbhA protein [Escherichia coli CFT073] Length = 262 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 22 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 81 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 82 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 141 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 142 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 201 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 202 DQMLLDAKNPQSAGNRRIEIMVLTK 226 >gi|312964712|ref|ZP_07778963.1| lateral flagellar motor protein B [Escherichia coli 2362-75] gi|312290733|gb|EFR18611.1| lateral flagellar motor protein B [Escherichia coli 2362-75] Length = 254 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 94/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 14 AALHGQSIFNGGGLSPLNKISPTHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 73 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 74 ELATSINTIVRDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 133 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA +++ +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 134 PVFDSLDNKIIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 193 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 194 DQMLLDAKNPQSAGNRRIEIMVLTK 218 >gi|220927721|ref|YP_002504630.1| OmpA/MotB domain protein [Clostridium cellulolyticum H10] gi|219998049|gb|ACL74650.1| OmpA/MotB domain protein [Clostridium cellulolyticum H10] Length = 259 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 11/159 (6%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++++ L K+I+S + + + V GI+++I ++ +F S+I P+ Sbjct: 89 EDQQMEALEKEINSLVDS---EGLKGNVAVTMQERGIVVTINEK---ILFKSGSAIIEPK 142 Query: 248 TIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGV 304 + KIG+ + + I + GHTD P ++ NW LS RA + ++L++ G Sbjct: 143 DQDTVIKIGKDILSKIPNKHIRVEGHTDNVPMKSTLYASNWELSAGRAINVLKLLVEKGG 202 Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 ++ + + + + + NRR+DI++ Sbjct: 203 INPKMIHPVPYGEYSPLVPNTTDANRAKNRRVDIVILRD 241 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 11/113 (9%), Positives = 33/113 (29%), Gaps = 8/113 (7%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG--------KNLMTASK 81 + + YAD M +L+ F+V++ ++ + + + + Q + ++ Sbjct: 11 SERYLLTYADLMNLLLILFIVLYSMSQVNTEKFQQLSQSLSSAFGNGETAYVIQGGSSGN 70 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + D + ++ + S K + Sbjct: 71 SLIDFPATMPSPVIPSKIEDQQMEALEKEINSLVDSEGLKGNVAVTMQERGIV 123 >gi|298206940|ref|YP_003715119.1| putative flagellar motor protein MotB [Croceibacter atlanticus HTCC2559] gi|83849574|gb|EAP87442.1| putative flagellar motor protein MotB [Croceibacter atlanticus HTCC2559] Length = 321 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 108/300 (36%), Gaps = 13/300 (4%) Query: 51 MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN---KIDLSIDEHIT 107 + + + K +E + + + + + E + D Sbjct: 15 LLLTSCVSSKVYKDLEGKYADVKRENRSLKDDLSKFKTSSEEFETSLDVMTDKYASLKAE 74 Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 + ++ +T Q + + + ++S+ + +D K+ E++ Sbjct: 75 HDQLESDYNATKQSYESLQKSYDALEANSSKALAENSKQNRALIAELEDKKKALAEERAT 134 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + L S + + + + +S + D KG+ E + +S Sbjct: 135 LDKLKADLETRSNRINELESVIAAKEAKMQALKTAVSSALGDFEGKGLTVEQRNGKVYVS 194 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR--DN 284 + N +F+ S E + ++GEVLA + ++ I GHTD P+ DN Sbjct: 195 M---ENKLLFNSGSWAVGSEGRRAVNQLGEVLASNPDIAVLIEGHTDNVPYGGNGPLQDN 251 Query: 285 WRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 W LS RA S +L ++ + ++ G + ++D + NRRI++++ + Sbjct: 252 WDLSTKRATSIVNILRENSQIDPQNLTAA-GRGEYLPIASNDSATGKAKNRRIEVILTPK 310 >gi|77464614|ref|YP_354118.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1] gi|126463454|ref|YP_001044568.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|332559507|ref|ZP_08413829.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N] gi|77389032|gb|ABA80217.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1] gi|126105118|gb|ABN77796.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029] gi|332277219|gb|EGJ22534.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N] Length = 228 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + L V T + +++++ +F S+ P+ L + + Sbjct: 89 LDRQAADLRNSIGNSQVSVTNTGSELVVTMPQD---ILFATDSANLRPDLQRDLGAVAQN 145 Query: 259 LAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + GHTD++ A N LS+ RA S VL+ +GV R+S I G Sbjct: 146 LLRYPNSTIAVVGHTDST---GAAAYNQDLSMRRAQSVAGVLIGNGVPSYRVSAI-GRGE 201 Query: 318 HRLKIASDP--MNSANRRIDILVE 339 + ++ + NRR+DI++ Sbjct: 202 DQPIASNLTPEGRAQNRRVDIIIR 225 >gi|251772419|gb|EES52986.1| putative flagellar motor protein (OmpA/MotB) [Leptospirillum ferrodiazotrophum] Length = 285 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 7/131 (5%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274 + + GI I I + +F + + I VL+ I +L+ + I + GHTD Sbjct: 104 MKVVQSSEGIRIQI---QAAFLFRTGHAAVRKQAIPVLKNIAALLSKTKRDIRVEGHTDN 160 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSAN 331 P ++NW LS RA + L+ + R + +G+ +R + + N Sbjct: 161 VPIHGRYKNNWALSSMRAVNVLTTLIALAPIDPSR-ASAAGYGQYRPLVPNTSAENRQKN 219 Query: 332 RRIDILVEDRQ 342 RR++I+V + Sbjct: 220 RRVEIVVLKEK 230 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 K + NL W + YADF+T+L FF++M+ I+A + K + + Sbjct: 3 KKVKHEEHENLERWLVSYADFITLLFTFFVMMYAISAVNTGKYKVLSNAIVATFTH 58 >gi|313646638|gb|EFS11097.1| lateral flagellar motor protein B [Shigella flexneri 2a str. 2457T] gi|332761628|gb|EGJ91908.1| lateral flagellar motor protein B [Shigella flexneri 4343-70] gi|332761679|gb|EGJ91958.1| lateral flagellar motor protein B [Shigella flexneri 2747-71] gi|332764445|gb|EGJ94678.1| lateral flagellar motor protein B [Shigella flexneri K-671] gi|332768577|gb|EGJ98759.1| ompA family protein [Shigella flexneri 2930-71] gi|333008733|gb|EGK28197.1| lateral flagellar motor protein B [Shigella flexneri K-218] gi|333009709|gb|EGK29159.1| lateral flagellar motor protein B [Shigella flexneri VA-6] gi|333022107|gb|EGK41350.1| lateral flagellar motor protein B [Shigella flexneri K-304] Length = 256 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLYNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220 >gi|261821136|ref|YP_003259242.1| OmpA/MotB domain protein [Pectobacterium wasabiae WPP163] gi|261605149|gb|ACX87635.1| OmpA/MotB domain protein [Pectobacterium wasabiae WPP163] Length = 350 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 4/203 (1%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 K +LT S+ +++ + + + + RL L +++ + Sbjct: 65 KVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEARLNKLRERLDQLI 124 Query: 204 SGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + +L E G+ I IID +N PMF S+ P +L+ I +L Sbjct: 125 EADPRLRALRPHLLIEMIEEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIAPILNDF 184 Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR- 319 +SI GHTD + NW LS DRA ++ + L G+S+ ++ ++ G A Sbjct: 185 PNKLSISGHTDDVQYTTGERGYSNWELSADRANASRRELTFGGLSDGKVLRVVGMAATMS 244 Query: 320 LKIASDPMNSANRRIDILVEDRQ 342 LK A+ ++ NRRI +LV +Q Sbjct: 245 LKQATSGNDAINRRISLLVLSKQ 267 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 Q II+KK ++ GSWKI YADFMT +MA FLVMW+I + I +YF Sbjct: 2 KHQHPIIRKKRKSGHGGHHGGSWKIAYADFMTAMMALFLVMWLIAISTPMQLAQIAEYFR 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 K +T+ D +P + + + +++ + R + Sbjct: 62 TPLKVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEARLNKLRERLD 121 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 ++ + + L E+G + + + K + + P ++ + A+ Sbjct: 122 QLIEADPRLRALRPHLLIEMIEEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIA 178 >gi|52081472|ref|YP_080263.1| flagellar motor protein MotS [Bacillus licheniformis ATCC 14580] gi|52786848|ref|YP_092677.1| flagellar motor protein MotS [Bacillus licheniformis ATCC 14580] gi|52004683|gb|AAU24625.1| YtxE [Bacillus licheniformis ATCC 14580] gi|52349350|gb|AAU41984.1| YtxE [Bacillus licheniformis ATCC 14580] Length = 229 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 64/177 (36%), Gaps = 8/177 (4%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 S + K+ K +K + + + + + + + G++ Sbjct: 54 SFQDRADGKSAAELKKDAGDQKAEKTAKSQDDLLKKINDYIEKNELSSLIAAKRDERGVI 113 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDN 284 + + + +FD + + +L KI +L + I + GHTD+ P N Sbjct: 114 LVLQEA---VLFDSGKADLKDQAHPLLHKIAVLLKSVSNPIRVEGHTDSRPISTYRFPSN 170 Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 W LS RA + + R I G+A + + + NRR++I++ Sbjct: 171 WELSAARASTVIGYFTSKEKLDSSRFLAI-GYADTKPVRDNRTESHMKENRRVEIVI 226 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 36/82 (43%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 + + + +W I ++D +T+++ FF++++ ++ D + KA F Sbjct: 4 RHERRKREQGRKSPNWIITFSDLITLILVFFILLFSMSQIDLNKFKAAVGSFQDRADGKS 63 Query: 78 TASKGIFDEQNPPERSSQNKID 99 A E++++++ D Sbjct: 64 AAELKKDAGDQKAEKTAKSQDD 85 >gi|290508935|ref|ZP_06548306.1| OmpA domain-containing protein [Klebsiella sp. 1_1_55] gi|289778329|gb|EFD86326.1| OmpA domain-containing protein [Klebsiella sp. 1_1_55] Length = 565 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 9/151 (5%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L + + ++ + V+ + + I + + +FD S P + +L Sbjct: 397 LIPFVEAAINDWAPPPPPRPVIKQVVQGPQTIRL---DSMALFDTGKSTLKPGSTKLLVN 453 Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + I + GHTD+ + N +LSL RA + + +G + + Sbjct: 454 SLLGIKAKPGWLIVVAGHTDSI---GNDKSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQ 510 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G+ R +++ + NRR++I + ++ Sbjct: 511 GYGASRPVASNETPDGRAQNRRVEISLVPQK 541 >gi|331656310|ref|ZP_08357272.1| MbhA protein [Escherichia coli TA206] gi|331054558|gb|EGI26567.1| MbhA protein [Escherichia coli TA206] Length = 261 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225 >gi|118589219|ref|ZP_01546625.1| hypothetical protein SIAM614_06738 [Stappia aggregata IAM 12614] gi|118437919|gb|EAV44554.1| hypothetical protein SIAM614_06738 [Stappia aggregata IAM 12614] Length = 360 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 7/162 (4%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 A + + + A + + + ++ I+ + + F S Sbjct: 203 ARKAAEPAQSVSTDAAPKVTASQSAASTALEPEGNLDSEACTGRFEILSRTDNIYFPSGS 262 Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 S P + +L + +++ VI + GHTD+ N LS RA + Q L+ Sbjct: 263 SQLDPRSEPLLNSLVDIILRCPGLVIEVGGHTDSD---GSDTSNQLLSERRAGAVKQYLV 319 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340 + E RI + G+ R A+ + NRRI+ +V + Sbjct: 320 SKSIPESRIKSV-GYGESRPVAANTSADGKRRNRRIEFVVVE 360 >gi|108808116|ref|YP_652032.1| putative OmpA family protein [Yersinia pestis Antiqua] gi|108812385|ref|YP_648152.1| OmpA family protein [Yersinia pestis Nepal516] gi|145599315|ref|YP_001163391.1| OmpA family protein [Yersinia pestis Pestoides F] gi|162419405|ref|YP_001606412.1| SciP protein [Yersinia pestis Angola] gi|165925389|ref|ZP_02221221.1| SciP protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937006|ref|ZP_02225571.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008588|ref|ZP_02229486.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166214237|ref|ZP_02240272.1| SciP protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399212|ref|ZP_02304736.1| SciP protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421156|ref|ZP_02312909.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424473|ref|ZP_02316226.1| SciP protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229838286|ref|ZP_04458445.1| putative OmpA family protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895433|ref|ZP_04510605.1| putative OmpA family protein [Yersinia pestis Pestoides A] gi|229898850|ref|ZP_04513995.1| putative OmpA family protein [Yersinia pestis biovar Orientalis str. India 195] gi|229902751|ref|ZP_04517868.1| putative OmpA family protein [Yersinia pestis Nepal516] gi|270490077|ref|ZP_06207151.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis KIM D27] gi|108776033|gb|ABG18552.1| OmpA family protein [Yersinia pestis Nepal516] gi|108780029|gb|ABG14087.1| putative OmpA family protein [Yersinia pestis Antiqua] gi|145211011|gb|ABP40418.1| OmpA family protein [Yersinia pestis Pestoides F] gi|162352220|gb|ABX86168.1| SciP protein [Yersinia pestis Angola] gi|165914869|gb|EDR33481.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922996|gb|EDR40147.1| SciP protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992970|gb|EDR45271.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166204593|gb|EDR49073.1| SciP protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960645|gb|EDR56666.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051716|gb|EDR63124.1| SciP protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056355|gb|EDR66124.1| SciP protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680198|gb|EEO76297.1| putative OmpA family protein [Yersinia pestis Nepal516] gi|229688398|gb|EEO80469.1| putative OmpA family protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694652|gb|EEO84699.1| putative OmpA family protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701588|gb|EEO89615.1| putative OmpA family protein [Yersinia pestis Pestoides A] gi|262366676|gb|ACY63233.1| OmpA family protein [Yersinia pestis D182038] gi|270338581|gb|EFA49358.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis KIM D27] gi|320014519|gb|ADV98090.1| putative OmpA family protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 278 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290 + MF S PE I V++++ + + I I GHTD+ P + +N LS Sbjct: 168 KGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEK 227 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 RA + + + ++G+ D+I + G + ++D S NRR++I V Sbjct: 228 RAANVARYMEQAGIPTDKI-RFEGKGETQPVSSNDDATGRSQNRRVEIFV 276 >gi|224369952|ref|YP_002604116.1| MotB2 [Desulfobacterium autotrophicum HRM2] gi|223692669|gb|ACN15952.1| MotB2 [Desulfobacterium autotrophicum HRM2] Length = 244 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 8/147 (5%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I +V + ++++I +FD S+ +L +I V Sbjct: 98 IRDVNRFIVNREAPDTIKTHVLDGKVIVTIN---GQTLFDSGSANLKQGATAILDRIVAV 154 Query: 259 LAHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + E I+I+G+TD P NW LS RA + + L++ G++ R++ +G+A Sbjct: 155 VFEYPEYSINIKGYTDDIPIETAQFPSNWELSAIRATTVLKHLIQKGINPKRLTA-TGYA 213 Query: 317 HHRLKIAS--DPMNSANRRIDILVEDR 341 + + D + NRR++ ++E + Sbjct: 214 DMEPLVPNTSDTNRAINRRVEFVLEKK 240 >gi|209917443|ref|YP_002291527.1| hypothetical protein ECSE_0251 [Escherichia coli SE11] gi|209910702|dbj|BAG75776.1| putative motility protein [Escherichia coli SE11] Length = 262 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 92/205 (44%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + + +KK +L Sbjct: 22 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTVLLKKKSATELG 81 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 82 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKRLLVELA 141 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 142 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 201 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 202 DQMLLDSKNPQSAGNRRIEIMVLTK 226 >gi|114777177|ref|ZP_01452188.1| outer membrane protein [Mariprofundus ferrooxydans PV-1] gi|114552322|gb|EAU54805.1| outer membrane protein [Mariprofundus ferrooxydans PV-1] Length = 212 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + FD S+ P ++ L K L + + HTD+ N LS Sbjct: 104 KLEGVYFDNDSAKLRPASVATLDKAVATLNRRATIKVEVAAHTDS---SGSDAYNLSLSE 160 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA S L+ G+ R++ G+ + ++ + NRR+++ V + Sbjct: 161 RRAASVRDYLVAHGIDAARLTS-KGYGETQPIASNATKEGRAKNRRVELRVMN 212 >gi|206579667|ref|YP_002238891.1| OmpA domain protein [Klebsiella pneumoniae 342] gi|206568725|gb|ACI10501.1| OmpA domain protein [Klebsiella pneumoniae 342] Length = 567 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + P + L + I + GHTD+ + N LSL Sbjct: 433 DSMSLFDTGKWVLKPGSTKRLVNSLMDIKARPGWLIVVAGHTDSV---GEEKANQLLSLK 489 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA S + +G D + G+ R +D + NRR++I + Sbjct: 490 RAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 539 >gi|206577657|ref|YP_002237882.1| OmpA domain protein [Klebsiella pneumoniae 342] gi|206566715|gb|ACI08491.1| OmpA domain protein [Klebsiella pneumoniae 342] Length = 565 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 9/151 (5%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L + + ++ + V+ + + I + + +FD S P + +L Sbjct: 397 LIPFVEAAINDWAPPPPPRPVIKQVVQGPQTIRL---DSMALFDTGKSTLKPGSTKLLVN 453 Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + I + GHTD+ + N +LSL RA + + +G + + Sbjct: 454 SLLGIKAKPGWLIVVAGHTDSI---GNDKSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQ 510 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G+ R +++ + NRR++I + ++ Sbjct: 511 GYGASRPVASNETPEGRAKNRRVEISLVPQK 541 >gi|168180924|ref|ZP_02615588.1| chemotaxis motB protein [Clostridium botulinum NCTC 2916] gi|237796091|ref|YP_002863643.1| chemotaxis motB protein [Clostridium botulinum Ba4 str. 657] gi|182668356|gb|EDT80335.1| chemotaxis motB protein [Clostridium botulinum NCTC 2916] gi|229263486|gb|ACQ54519.1| chemotaxis protein MotB [Clostridium botulinum Ba4 str. 657] Length = 247 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ D + +N+ V + GI+I + D +F+ + P++ Sbjct: 88 RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306 ++ KI ++A + I GHTD P +N NW LS RA + + ++ + Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 R + G+ +R ++ S NRR++I++ ++ Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANRSKNRRVNIVIVSKE 241 >gi|284040562|ref|YP_003390492.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283819855|gb|ADB41693.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 294 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 9/157 (5%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +R L + +L + D + V E + + +SI D+ +F S P+ Sbjct: 125 QRKDSLNLALVMSLKRSLDDINDQDVQVEVKKGVVYVSISDKL---LFKSGSYDITPKAE 181 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-GVSE 306 VL K+ +V+ + I + GHTDA P A +DNW LS RA S + L GV+ Sbjct: 182 TVLGKVAKVVNDHKDLDILVEGHTDAVPISTPAIKDNWDLSALRATSVVRTLQAKFGVAP 241 Query: 307 DRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 +R++ G + K + NRR +I++ + Sbjct: 242 ERLTAG-GRSEFAPKDDNTTAVGRQQNRRTEIIITPK 277 >gi|168182734|ref|ZP_02617398.1| chemotaxis motB protein [Clostridium botulinum Bf] gi|182674075|gb|EDT86036.1| chemotaxis motB protein [Clostridium botulinum Bf] Length = 247 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 68/158 (43%), Gaps = 8/158 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ D + +N+ V + GI+I + D +F+ + P++ Sbjct: 88 RETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDN---VLFEIGRADIKPQS 144 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSE 306 ++ KI ++A + I GHTD P +N NW LS RA + + ++ + Sbjct: 145 KQIMDKINGLIATLPNEVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNP 204 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 R + G+ +R ++ S NRR++I++ ++ Sbjct: 205 VRFTAA-GYGEYRPIAQNNSDANRSKNRRVNIVIVSKE 241 >gi|30261729|ref|NP_844106.1| flagellar motor protein MotS [Bacillus anthracis str. Ames] gi|47526945|ref|YP_018294.1| flagellar motor protein MotS [Bacillus anthracis str. 'Ames Ancestor'] gi|49184555|ref|YP_027807.1| flagellar motor protein MotS [Bacillus anthracis str. Sterne] gi|165869455|ref|ZP_02214114.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0488] gi|167633407|ref|ZP_02391732.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0442] gi|167639130|ref|ZP_02397403.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0193] gi|170686155|ref|ZP_02877377.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0465] gi|170706447|ref|ZP_02896907.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0389] gi|177650324|ref|ZP_02933291.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0174] gi|190566282|ref|ZP_03019200.1| putative chemotaxis protein MotB [Bacillus anthracis Tsiankovskii-I] gi|218902843|ref|YP_002450677.1| putative chemotaxis protein MotB [Bacillus cereus AH820] gi|225863587|ref|YP_002748965.1| putative chemotaxis protein MotB [Bacillus cereus 03BB102] gi|227815517|ref|YP_002815526.1| putative chemotaxis protein MotB [Bacillus anthracis str. CDC 684] gi|229604338|ref|YP_002866130.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0248] gi|254683216|ref|ZP_05147077.1| flagellar motor protein MotS [Bacillus anthracis str. CNEVA-9066] gi|254723805|ref|ZP_05185591.1| flagellar motor protein MotS [Bacillus anthracis str. A1055] gi|254734568|ref|ZP_05192280.1| flagellar motor protein MotS [Bacillus anthracis str. Western North America USA6153] gi|254740977|ref|ZP_05198665.1| flagellar motor protein MotS [Bacillus anthracis str. Kruger B] gi|254755218|ref|ZP_05207252.1| flagellar motor protein MotS [Bacillus anthracis str. Vollum] gi|254759755|ref|ZP_05211779.1| flagellar motor protein MotS [Bacillus anthracis str. Australia 94] gi|30255957|gb|AAP25592.1| putative chemotaxis protein MotB [Bacillus anthracis str. Ames] gi|47502093|gb|AAT30769.1| putative chemotaxis protein MotB [Bacillus anthracis str. 'Ames Ancestor'] gi|49178482|gb|AAT53858.1| chemotaxis protein MotB, putative [Bacillus anthracis str. Sterne] gi|164714895|gb|EDR20413.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0488] gi|167512920|gb|EDR88293.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0193] gi|167531445|gb|EDR94123.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0442] gi|170128545|gb|EDS97412.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0389] gi|170669852|gb|EDT20593.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0465] gi|172083468|gb|EDT68528.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0174] gi|190562417|gb|EDV16384.1| putative chemotaxis protein MotB [Bacillus anthracis Tsiankovskii-I] gi|218535723|gb|ACK88121.1| putative chemotaxis protein MotB [Bacillus cereus AH820] gi|225787259|gb|ACO27476.1| putative chemotaxis protein MotB [Bacillus cereus 03BB102] gi|227002562|gb|ACP12305.1| putative chemotaxis protein MotB [Bacillus anthracis str. CDC 684] gi|229268746|gb|ACQ50383.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0248] Length = 225 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 4 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 63 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + ++ L V +N + V TG+ + I+D +FD Sbjct: 64 PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297 + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 121 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 180 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 181 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225 >gi|153948417|ref|YP_001399654.1| hypothetical protein YpsIP31758_0662 [Yersinia pseudotuberculosis IP 31758] gi|152959912|gb|ABS47373.1| flagellar motor protein B [Yersinia pseudotuberculosis IP 31758] Length = 303 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 98/230 (42%), Gaps = 4/230 (1%) Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + + S ++++ N + S + + + +++ + Sbjct: 50 VGVVSEEERQEIVAQLNGKTIFAQQSFISIPSKSKSGGGKLSNSIDGKEQAKETKSNLAI 109 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P + + K + +++L++ I S N + E G+ I I D Sbjct: 110 EVPEPEQSLEEVVDKSRNEMEELSRIIMQITSAY---NAQSNLQMEVVPQGLRILIQDDL 166 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDR 291 MF +SS++ P +L ++ I I GHTDAS +R+ +NW LS +R Sbjct: 167 QRDMFQRSSAVLTPFFSRLLGELAPAFNEMDNKIIITGHTDASRYRDQLLYNNWNLSGER 226 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 A A++ L+ G+ + R+ +I+ A L +DP+ + NRRI+I+V + Sbjct: 227 ALMAHKALVSGGLDKGRVLQINAMADQMLLDPTDPLAAKNRRIEIMVLTK 276 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 46/115 (40%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 + IIK+ + G+WK+ +ADF +MA F+V+WI+ ++ ++ I Sbjct: 3 NHASGGATTIIKRANRKKHHARHSGAWKVAFADFTLAMMALFMVLWIVGVVSEEERQEIV 62 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 N + I + N ID TK+++ +++ Q Sbjct: 63 AQLNGKTIFAQQSFISIPSKSKSGGGKLSNSIDGKEQAKETKSNLAIEVPEPEQS 117 >gi|255068383|ref|ZP_05320238.1| OmpA family protein [Neisseria sicca ATCC 29256] gi|255047376|gb|EET42840.1| OmpA family protein [Neisseria sicca ATCC 29256] Length = 421 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 73/179 (40%), Gaps = 9/179 (5%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 ++ S+ + + ++ K+ ++ K++ ++ L +A + V E + Sbjct: 217 MQWSLGDDFDVASTKVNNLKLPSVTAKQQETQSTVRLRPLLENEIARKL---VSVEDFQD 273 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IA 281 ++I+ +F+ S+ + VL ++ + L I + G+TD P ++ Sbjct: 274 RSTVTIL---GDGLFESGSAQIQDQYYPVLARVSQALDSVEGQIVVTGYTDNQPIQSLNF 330 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 NW LS RA + ++L+ + + G +D + NRR++I + Sbjct: 331 PSNWHLSQARADAVKEILLNYIKNGGVRIRSEGRGSTDPVAPNDTLENRAKNRRVEITL 389 >gi|229058360|ref|ZP_04196744.1| OmpA/MotB domain protein [Bacillus cereus AH603] gi|229166569|ref|ZP_04294321.1| OmpA/MotB domain protein [Bacillus cereus AH621] gi|228616823|gb|EEK73896.1| OmpA/MotB domain protein [Bacillus cereus AH621] gi|228719869|gb|EEL71459.1| OmpA/MotB domain protein [Bacillus cereus AH603] Length = 225 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 4 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDAEQVDAKVMEGTI 63 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + ++ L V +N V V TG+ I I+D +FD Sbjct: 64 PDISHEKNDEKAVSKKRMDELYKKLKAYVDNNGVSQVNVYREDTGVSIVIVDNL---IFD 120 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297 + PE V+ ++ I + GHTD+ P N NW LS RA + Sbjct: 121 TGDANVKPEAKEVISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 180 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + ++D NRR+ I +++ Sbjct: 181 HLIEVYNVDDKRLAAV-GYADTKPVASNDSPQNWEKNRRVVIYIKE 225 >gi|331671759|ref|ZP_08372555.1| OmpA family membrane protein [Escherichia coli TA280] gi|331070748|gb|EGI42107.1| OmpA family membrane protein [Escherichia coli TA280] Length = 438 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + E + R MF V+ K +A Sbjct: 305 LANEIARGLLTVEEDDHHSRVIF---RGDTMFIPGQKTVNDALRPVIDKAAREIARVGGA 361 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD+ P + N LS RA +L G+ RI ++ G + Sbjct: 362 VTVTGHTDSQPIHSAEFPSNQVLSEKRAAEVASLLTSGGIPASRI-RVVGKGDTVPVADN 420 Query: 325 --DPMNSANRRIDILVED 340 + NRR++ILV + Sbjct: 421 RTKTGRAQNRRVEILVVE 438 >gi|261365147|ref|ZP_05978030.1| OmpA family protein [Neisseria mucosa ATCC 25996] gi|288566399|gb|EFC87959.1| OmpA family protein [Neisseria mucosa ATCC 25996] Length = 421 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 76/182 (41%), Gaps = 15/182 (8%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 ++ S+ + + ++ K+ ++ K++ ++ L +A + V E + Sbjct: 217 MQWSLGDDFDTASTKVNNLKLPSVTAKQQETQGTIRLRPLLENEIARKL---VSVEDFQD 273 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IA 281 ++I+ +F+ S+ + VL ++ + L I + G+TD P ++ Sbjct: 274 RSTVTIL---GDGLFESGSAQIQDQYYPVLARVSQALDSVEGQIVVTGYTDDKPIQSLNF 330 Query: 282 RDNWRLSLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 NW LS RA + ++L +K+G RI G +D + NRR++I Sbjct: 331 PSNWHLSQARADAVKEILLNYIKNG--GTRIRS-EGRGSTDPVAPNDTLENRAKNRRVEI 387 Query: 337 LV 338 + Sbjct: 388 TL 389 >gi|331269325|ref|YP_004395817.1| chemotaxis motB protein [Clostridium botulinum BKT015925] gi|329125875|gb|AEB75820.1| chemotaxis motB protein [Clostridium botulinum BKT015925] Length = 242 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 8/151 (5%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + V + GI+I + D +FD + + + +L KI Sbjct: 92 EAMYGKVKEFMDKNKLDNTVQVKRDARGIIIELKDN---ILFDSAQAEIKAPSKEILDKI 148 Query: 256 GEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKIS 313 +L I I GHTD P N NW LS RA + + ++ G++ D+ Sbjct: 149 SRLLESVPNGIIIEGHTDNVPIHNTKYESNWELSTQRAVNVLKYFVESKGLAPDKFQAA- 207 Query: 314 GFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 G+ +D + NRR++IL+ + Sbjct: 208 GYGEFHPIEKNDNYADRAKNRRVNILITASE 238 Score = 40.3 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 28/90 (31%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + W YAD +T+L+ FF++++ ++ D I + Sbjct: 3 RRKKAQQSEGGGEEWLQTYADTITLLLTFFVLLYASSSIDAVKFNKISSSLQSVLSGSNS 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 S F+ + + Sbjct: 63 NSILDFNSNGEVPIVGPPQEMGPKSGGGNE 92 >gi|218688122|ref|YP_002396334.1| hypothetical protein ECED1_0264 [Escherichia coli ED1a] gi|218425686|emb|CAR06478.1| flagellar system protein [Escherichia coli ED1a] Length = 296 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 56 AALHGQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 115 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 116 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 175 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 176 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 235 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 236 DQMLLDAKNPQSAGNRRIEIMVLTK 260 >gi|332341583|gb|AEE54917.1| lateral flagellar motor protein B LafU [Escherichia coli UMNK88] Length = 256 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + S S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFSGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220 >gi|152970821|ref|YP_001335930.1| hypothetical protein KPN_02274 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955670|gb|ABR77700.1| putative exported protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 565 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 9/151 (5%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L + + ++ + V+ + + I + + +FD S P + +L Sbjct: 397 LIPFVEAAINDWAPPPPPRPVIKQVVQGPQTIRL---DSMALFDTGKSTLKPGSTKLLVN 453 Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + I + GHTD+ R N +LSL RA + + +G + + Sbjct: 454 SLLGIKAKPGWLIVVAGHTDSI---GNDRSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQ 510 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G+ R +++ + NRR++I + ++ Sbjct: 511 GYGASRPVASNETPEGRAQNRRVEISLVPQK 541 >gi|94970509|ref|YP_592557.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter versatilis Ellin345] gi|94552559|gb|ABF42483.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter versatilis Ellin345] Length = 264 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 2/153 (1%) Query: 189 KKRLQDLAKKISSTLSGLV-ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 K + +L +++ + + + + K + T G+ I +++ FD S+ P Sbjct: 84 KDNMPELKEQLQRAIRKMNNFEQLKKQIEITVTSEGLRIELLESAAGTFFDSGSARPNDS 143 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ + L + ISI GHTD+ PF + NW LS DRA +A +++ SGV Sbjct: 144 GKELLEMLAHELQNLPNTISIEGHTDSKPFVGNGSYSNWELSADRANAARRLMQDSGVRG 203 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++S++ GFA L+ P + +NRRI ILV+ Sbjct: 204 NQVSQVRGFADQNLRKKDAPEDPSNRRITILVQ 236 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 +WK+ YADF+T +MA F+V+W++N + +AI YF Sbjct: 23 AWKVAYADFVTAMMALFIVLWLMNTSKPVK-EAISGYFKDPSGTAKKTGSAQSGTGENFT 81 Query: 92 RSSQNKIDLSID 103 + N +L Sbjct: 82 ITKDNMPELKEQ 93 >gi|237740698|ref|ZP_04571179.1| outer membrane porin F [Fusobacterium sp. 2_1_31] gi|229422715|gb|EEO37762.1| outer membrane porin F [Fusobacterium sp. 2_1_31] Length = 340 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 88/286 (30%), Gaps = 10/286 (3%) Query: 56 ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 + + + NP K + +K I + + +D + Sbjct: 59 SITIPEIQNLSVSENPDAKITLDMTKKISSVPGITISPVKVENGNIVDGSYSMQIGKNGD 118 Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 G K L+ + +++ + + + ++ + + Y Sbjct: 119 GQYINKVTGVILQVDKDGTGLYTDNKNNIKIYVGEI-NARYESPNVEIINNGDGSGTYTD 177 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 + K K ++ + L ++ V + + I Sbjct: 178 KSKNLVIENDGKGKAKITFNGQTTEVDAKPLEKPGKLEMVPPVPSIEANSLLITSDSG-I 236 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD PE VL+ + VL + I G+TD+ N LS RA S Sbjct: 237 LFDVDKYDVRPEDKEVLKNLATVLKEMNVKNFEIDGYTDSD---GSDEHNQVLSEKRANS 293 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ GV+ + G+ + ++D NRR++I++ Sbjct: 294 VKNFLVSQGVTAE--ITTKGYGESKPVASNDTAEGRQKNRRVEIII 337 >gi|65318994|ref|ZP_00391953.1| COG1360: Flagellar motor protein [Bacillus anthracis str. A2012] gi|228933012|ref|ZP_04095875.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826613|gb|EEM72384.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 227 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 6 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 65 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + ++ L V +N + V TG+ + I+D +FD Sbjct: 66 PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 122 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297 + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 182 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 227 >gi|46202032|ref|ZP_00053894.2| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum MS-1] Length = 274 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 87/265 (32%), Gaps = 19/265 (7%) Query: 95 QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK- 153 Q K + +++ + + + + +Q + + + + ++ + Sbjct: 11 QTKANAALEAELMSSRAEKEKMEAWAAGVHQDMAALLALKDEKEAELAAEKKISDEGRAQ 70 Query: 154 ----GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + + + + ++K KRL L ++ Sbjct: 71 LALLNQQIAAMREELARVTAALDASEARDKEQKAQIADLGKRLNVALAGKVEELQKYRSE 130 Query: 210 NIVKGVLFETTRTGILISIIDQRNTP--MFDKSSSIPLPETIVVLQKIGEVLAH------ 261 + GI I +F S+ PE + + ++ L Sbjct: 131 FFGRLRKVLGDHPGIRIEGDRFIFQSELLFATGSADLGPEGVEQVGRLAATLKDIAKTMP 190 Query: 262 --STEVISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 V+ I GHTD P NW LS RA + + L +GV +DR+ +GF Sbjct: 191 KGVNWVLRIDGHTDRRPMVSGRYPSNWELSTARAITVLRTLAANGVPKDRL-AAAGFGEF 249 Query: 319 RLK--IASDPMNSANRRIDILVEDR 341 + ++ + NRRI+I + R Sbjct: 250 QPVDPADNEAAYAKNRRIEIRFDQR 274 >gi|331675914|ref|ZP_08376631.1| putative motility protein [Escherichia coli H591] gi|331076474|gb|EGI47751.1| putative motility protein [Escherichia coli H591] Length = 261 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 92/205 (44%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + + +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTVLLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKRLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 201 DQMLLDSKNPQSAGNRRIEIMVLTK 225 >gi|107100485|ref|ZP_01364403.1| hypothetical protein PaerPA_01001510 [Pseudomonas aeruginosa PACS2] Length = 188 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F SS L I E L ++ +SI GHTD+ N +LS RA + Sbjct: 83 FAFDSSKVDAADSEKLNGIAERLKGEAASTRLSITGHTDSV---GSDAYNQKLSERRANA 139 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L+ +GV I + G + + + NRR++IL++ Sbjct: 140 VANYLIDAGVPSSIIVGVQGLGESQPVADNKTREGRAENRRVEILIKR 187 >gi|254719262|ref|ZP_05181073.1| OmpA family protein [Brucella sp. 83/13] gi|265984261|ref|ZP_06096996.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13] gi|306838013|ref|ZP_07470871.1| OmpA family protein [Brucella sp. NF 2653] gi|264662853|gb|EEZ33114.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13] gi|306406937|gb|EFM63158.1| OmpA family protein [Brucella sp. NF 2653] Length = 220 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 10/150 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A + GV I++++ FD + L + Sbjct: 77 NYMDRQEAELRAQSQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 133 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + + + G TD++ A N LS RA S L G+ R + G+ Sbjct: 134 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-AVIGY 189 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR++I + +G Sbjct: 190 GASQPIASNATPEGRAQNRRVEIQISPLRG 219 >gi|62290115|ref|YP_221908.1| OmpA family protein [Brucella abortus bv. 1 str. 9-941] gi|82700038|ref|YP_414612.1| outer membrane protein MotY [Brucella melitensis biovar Abortus 2308] gi|189024353|ref|YP_001935121.1| outer membrane protein [Brucella abortus S19] gi|254689424|ref|ZP_05152678.1| Bacterial outer membrane protein [Brucella abortus bv. 6 str. 870] gi|254697559|ref|ZP_05159387.1| Bacterial outer membrane protein [Brucella abortus bv. 2 str. 86/8/59] gi|254730453|ref|ZP_05189031.1| Bacterial outer membrane protein [Brucella abortus bv. 4 str. 292] gi|256257670|ref|ZP_05463206.1| Bacterial outer membrane protein [Brucella abortus bv. 9 str. C68] gi|260546663|ref|ZP_05822402.1| bacterial outer membrane protein [Brucella abortus NCTC 8038] gi|260754947|ref|ZP_05867295.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260758163|ref|ZP_05870511.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260761989|ref|ZP_05874332.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|62196247|gb|AAX74547.1| OmpA family protein [Brucella abortus bv. 1 str. 9-941] gi|82616139|emb|CAJ11182.1| MotY protein:Bacterial outer membrane protein:OmpA/MotB domain [Brucella melitensis biovar Abortus 2308] gi|189019925|gb|ACD72647.1| Bacterial outer membrane protein [Brucella abortus S19] gi|260095713|gb|EEW79590.1| bacterial outer membrane protein [Brucella abortus NCTC 8038] gi|260668481|gb|EEX55421.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260672421|gb|EEX59242.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260675055|gb|EEX61876.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str. 870] Length = 220 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 10/150 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A GV I++++ FD + L + Sbjct: 77 NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 133 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + + + G TD++ A N LS RA S L G+ R + G+ Sbjct: 134 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-SVIGY 189 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343 + +++ + NRR++I + +G Sbjct: 190 GASQPIVSNATPEGRAQNRRVEIQISPLRG 219 >gi|325918947|ref|ZP_08181016.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas vesicatoria ATCC 35937] gi|325534834|gb|EGD06761.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas vesicatoria ATCC 35937] Length = 365 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 19/252 (7%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 +E + G + + + + + + + D D Sbjct: 119 EEEFDATPNPVSPGQQKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPQED 178 Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV-----LF 217 + +P + + G+ + Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPASQPGQTI 238 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 + +SI FD + S P+ +L + E+L + + + GHTD+ Sbjct: 239 GPDGCPVPVSI--DLKGVNFDFNKSTLRPDAQSILSEATEILKRYPDLKVEVAGHTDS-- 294 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328 + N +LS RA + Y L K+GV R+ G+ R + Sbjct: 295 -KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNANPDGSDNPEGR 353 Query: 329 SANRRIDILVED 340 + NRR ++ V++ Sbjct: 354 AKNRRTELNVQN 365 >gi|21241777|ref|NP_641359.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306] gi|294627877|ref|ZP_06706456.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666871|ref|ZP_06732103.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|21107151|gb|AAM35895.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306] gi|292597791|gb|EFF41949.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603388|gb|EFF46807.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 365 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 23/254 (9%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 +E + G + + + + + + + D D Sbjct: 119 EEEFDATPNPVSPGQQKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPQED 178 Query: 163 LEKSINKEENYFLP-------PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + +P L D +++ + + Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPNSQPGQTI 238 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + + I + FD + S P+ + +L + E+L + + + GHTD+ Sbjct: 239 GPDGCPVPVSIDLKGVN----FDFNKSTLRPDAVSILSEATEILKRYPDLKVEVAGHTDS 294 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------P 326 + N +LS RA + Y L K+GV R+ G+ R + Sbjct: 295 ---KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDGSDNPE 351 Query: 327 MNSANRRIDILVED 340 + NRR ++ V++ Sbjct: 352 GRAKNRRTELNVQN 365 >gi|206603127|gb|EDZ39607.1| Putative flagellar motor protein (OmpA/MotB) [Leptospirillum sp. Group II '5-way CG'] Length = 261 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 10/160 (6%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 K ++Q + + L ++ V+ + I + +F + Sbjct: 78 KASPQVQSVMIQAMQLLVQKSSEKGDMKVVQTKEGIVLRIQ-----SRFLFASGHARVRR 132 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-V 304 + + VL+KI +LA + I + G+TD P R NW LS RA + L++ G + Sbjct: 133 KAVPVLRKIAALLARTNHEIRVHGYTDNQPIRTSRYPSNWALSTMRAVNVLTRLLEYGSI 192 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 R+ GF R ++ NRR++IL+ +R+ Sbjct: 193 DPGRMGAA-GFGKFRPIASNLTPEGREKNRRVEILIMNRE 231 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 27/56 (48%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 K + NL W + YADF+T+L AFF++++ I + + + + + Sbjct: 3 KKPRHEEHENLERWLVSYADFITLLFAFFVMLYAIASVNTGKFRVLSNAIVAAFTH 58 >gi|56421066|ref|YP_148384.1| flagellar motor protein MotB [Geobacillus kaustophilus HTA426] gi|56380908|dbj|BAD76816.1| motility protein B (flagellar motor rotation) [Geobacillus kaustophilus HTA426] Length = 259 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 82/208 (39%), Gaps = 10/208 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q+ ++ D + ++E ++ K K+ L + Sbjct: 47 QEIARAFSTAFAGGTGVLDFQSPIEPITPPAQDEEGRHQAKQPSPVVNGKEKEELGQIKA 106 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 KI S + + + + T G+ I+I+D +FD S+ + + +I Sbjct: 107 KIDSYIHD---NKLTGKLQTSLTDEGLAITILDD---ILFDSGSAEVRMKDRRLAAEISA 160 Query: 258 VL-AHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + I I GHTD P N NW LS+ RA + +VL+++ + R G+ Sbjct: 161 LLVMNPPRNIIISGHTDNVPIHNEKFASNWELSVMRAVNFMKVLLENKQLDPRYFSAKGY 220 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDR 341 ++ ++ NRR++IL+ R Sbjct: 221 GEYKPIASNATAAGRMKNRRVEILILPR 248 >gi|312795362|ref|YP_004028284.1| OmpA family protein [Burkholderia rhizoxinica HKI 454] gi|312167137|emb|CBW74140.1| OmpA family protein [Burkholderia rhizoxinica HKI 454] Length = 224 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 ++ FD +S P VL ++ + L E V + GHTD++ R N LS + Sbjct: 111 PSSVSFDTNSYAIKPSFTPVLDQVAQTLTQHPELVAHVVGHTDST---GQPRYNQMLSQE 167 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 RA S Q L GV+ R+ G + + + NRR++I + Sbjct: 168 RAQSVAQYLALHGVAAQRL-AAEGRGQSQPIADNSTEAGRAQNRRVEIYLRA 218 >gi|108757340|ref|YP_635150.1| putative chemotaxis MotB protein [Myxococcus xanthus DK 1622] gi|108461220|gb|ABF86405.1| putative chemotaxis MotB protein [Myxococcus xanthus DK 1622] Length = 295 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 77/229 (33%), Gaps = 10/229 (4%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + S + +++ + + L + E+ Sbjct: 38 RGTSQAEALAEQSRQSALDAATRARDAEAARLQLEQKLAALEAERAQLATEKEQLSSEKE 97 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + +++ L L + A+ + I + ++D+ +FD Sbjct: 98 QLSQTVQEQEAELAKLKATYDDLQDKMKAEIAEGAIRLSHAEGRIQVDLVDK---VLFDS 154 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR----NIARDNWRLSLDRAYS 294 + VL ++G VLA + I + GHTD SP + NW LS+ RA + Sbjct: 155 GDASISARGQEVLTRLGSVLAKVEDKSIQVSGHTDDSPPSQKLQSTFPSNWELSVARAVN 214 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + L +G R +G+ R + + NRRI++L+ Sbjct: 215 VVRFLQDTGGVPARRLVAAGYGQMRPVSTNATPLGRARNRRIEVLLMPD 263 >gi|86143638|ref|ZP_01062014.1| Thrombospondin type 3 repeat:OmpA/MotB [Leeuwenhoekiella blandensis MED217] gi|85829681|gb|EAQ48143.1| Thrombospondin type 3 repeat:OmpA/MotB [Leeuwenhoekiella blandensis MED217] Length = 461 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 31/269 (11%), Positives = 67/269 (24%), Gaps = 26/269 (9%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + + G+ + P+ D + E+ + Sbjct: 215 DECPETPGLPEFNGCPDTDGDGIKDSEDACPEVAGLPEFNGCPDTDGDGIPDNEDACPDV 274 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + + C ++ +D C + S N D Sbjct: 275 AGPAATNGCPDADGDGVIDSEDECPNEAGPASNNGCPFADADGDGVADKD--------DD 326 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + + + + +FD + + L + Sbjct: 327 CPNVAGPASNNGCPEVDASVLEV----------LNGEAGRILFDTDKATIRTSSYETLAR 376 Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKI 312 I ++ + GH D+ N LS RA S L GV+ ++ I Sbjct: 377 IASIVKEYPTASFEVEGHADSR---ASNAYNMDLSERRAQSVVDYLTSKEGVNASQL-SI 432 Query: 313 SGFAHHRLKIASDPMNS--ANRRIDILVE 339 + + + NRR+ + +E Sbjct: 433 KAYGEEQPIAPNTTAAGMQLNRRVKLTLE 461 >gi|168750213|ref|ZP_02775235.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4113] gi|168763471|ref|ZP_02788478.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4501] gi|168770028|ref|ZP_02795035.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4486] gi|168782991|ref|ZP_02807998.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4076] gi|168789703|ref|ZP_02814710.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC869] gi|168800332|ref|ZP_02825339.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC508] gi|187776213|ref|ZP_02801137.2| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4196] gi|189402400|ref|ZP_02782265.2| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4401] gi|194432761|ref|ZP_03065046.1| putative chemotaxis protein [Shigella dysenteriae 1012] gi|195938633|ref|ZP_03084015.1| hypothetical protein EscherichcoliO157_19762 [Escherichia coli O157:H7 str. EC4024] gi|208807047|ref|ZP_03249384.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4206] gi|208811824|ref|ZP_03253153.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4045] gi|208818543|ref|ZP_03258863.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4042] gi|209397836|ref|YP_002268857.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4115] gi|217325834|ref|ZP_03441918.1| putative chemotaxis protein [Escherichia coli O157:H7 str. TW14588] gi|254791390|ref|YP_003076227.1| hypothetical protein ECSP_0264 [Escherichia coli O157:H7 str. TW14359] gi|261223715|ref|ZP_05937996.1| hypothetical protein EscherichiacoliO157_03796 [Escherichia coli O157:H7 str. FRIK2000] gi|261255876|ref|ZP_05948409.1| hypothetical protein EscherichiacoliO157EcO_08593 [Escherichia coli O157:H7 str. FRIK966] gi|187768449|gb|EDU32293.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4196] gi|188015577|gb|EDU53699.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4113] gi|188999606|gb|EDU68592.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4076] gi|189355696|gb|EDU74115.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4401] gi|189361036|gb|EDU79455.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4486] gi|189366384|gb|EDU84800.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4501] gi|189370768|gb|EDU89184.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC869] gi|189377329|gb|EDU95745.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC508] gi|194419023|gb|EDX35107.1| putative chemotaxis protein [Shigella dysenteriae 1012] gi|208726848|gb|EDZ76449.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4206] gi|208733101|gb|EDZ81788.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4045] gi|208738666|gb|EDZ86348.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4042] gi|209159236|gb|ACI36669.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4115] gi|217322055|gb|EEC30479.1| putative chemotaxis protein [Escherichia coli O157:H7 str. TW14588] gi|254590790|gb|ACT70151.1| chemotaxis motB protein [Escherichia coli O157:H7 str. TW14359] gi|320190216|gb|EFW64866.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7 str. EC1212] gi|320638165|gb|EFX07914.1| hypothetical protein ECO5101_07089 [Escherichia coli O157:H7 str. G5101] gi|320654674|gb|EFX22675.1| hypothetical protein ECO7815_10457 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660242|gb|EFX27752.1| hypothetical protein ECO5905_08983 [Escherichia coli O55:H7 str. USDA 5905] gi|320665008|gb|EFX32118.1| hypothetical protein ECOSU61_13992 [Escherichia coli O157:H7 str. LSU-61] gi|326338763|gb|EGD62582.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7 str. 1044] gi|326342450|gb|EGD66230.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7 str. 1125] gi|332097320|gb|EGJ02301.1| lateral flagellar motor protein B [Shigella dysenteriae 155-74] Length = 256 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220 >gi|332704885|ref|ZP_08424973.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332555034|gb|EGJ52078.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 222 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 57/145 (39%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + S L GV I++++ FD S+ P+ VL + Sbjct: 80 YMDYQESKLRQRLQGTGVSVTRQGDMIILNM---PGNVTFDTGSAGIKPQFFEVLNSVAI 136 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + + GHTD++ N RLS DRA S Q L+ GV ++R + G Sbjct: 137 VLKEYEKTYVDVLGHTDST---GSMNLNMRLSQDRAQSVAQYLISQGVQQERFL-VRGMG 192 Query: 317 HHRLKIASDPMNSA--NRRIDILVE 339 ++ + NRR++I + Sbjct: 193 PNQPIADNSTAAGRSQNRRVEIKLT 217 >gi|228984812|ref|ZP_04144984.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775010|gb|EEM23404.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 225 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 4 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDAEQVDAKIMENTI 63 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + ++ L V +N + V TG+ + I+D +FD Sbjct: 64 PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297 + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 121 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 180 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 181 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225 >gi|193068683|ref|ZP_03049644.1| putative chemotaxis protein [Escherichia coli E110019] gi|192958046|gb|EDV88488.1| putative chemotaxis protein [Escherichia coli E110019] Length = 256 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLNNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220 >gi|120552993|ref|YP_957344.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8] gi|120322842|gb|ABM17157.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8] Length = 277 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 86/265 (32%), Gaps = 10/265 (3%) Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 P +++ K + L + ++NS Sbjct: 1 MQPARPLKKNRGKKGTPDWIVTFADLATLLLTFFILLLSFAEMDVEKYRAMANSMSLAFG 60 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS--KEKILAMKRKKRLQDLAKKISS 201 +++ + G + S+ + E+ + ++ + Sbjct: 61 SSNVVAEDVGGSPITLVESDTVSLPEPSESLQQQPEFIDERTERSETRQIPGGVLDLAGR 120 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + L + + + ++I ++ F + PE I +++++ VL+ Sbjct: 121 LVRELEEEVASETLHVNYDEDQVVIRFSEEAT---FRSGDATIKPEMIPIIERVVSVLSA 177 Query: 262 STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHR 319 + + + GH+D P + NW LS RA S L+ + +R+ G A R Sbjct: 178 CSGDVVVSGHSDDRPISSSQYRSNWDLSAARAVSVVHELVLNRDIPAERVVAA-GRAETR 236 Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342 + + NRR++I + + + Sbjct: 237 PLAPNTSPENRAINRRVEIAIRNPE 261 Score = 36.5 bits (82), Expect = 5.3, Method: Composition-based stats. Identities = 16/148 (10%), Positives = 39/148 (26%), Gaps = 5/148 (3%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG----- 73 + + + W + +AD T+L+ FF+++ D + +A+ + Sbjct: 5 RPLKKNRGKKGTPDWIVTFADLATLLLTFFILLLSFAEMDVEKYRAMANSMSLAFGSSNV 64 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 I ++ + L + + Sbjct: 65 VAEDVGGSPITLVESDTVSLPEPSESLQQQPEFIDERTERSETRQIPGGVLDLAGRLVRE 124 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKST 161 L SE + D + ++T Sbjct: 125 LEEEVASETLHVNYDEDQVVIRFSEEAT 152 >gi|321312511|ref|YP_004204798.1| flagellar motor protein MotS [Bacillus subtilis BSn5] gi|320018785|gb|ADV93771.1| flagellar motor protein MotS [Bacillus subtilis BSn5] Length = 242 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 76/197 (38%), Gaps = 11/197 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 D +K K S E + + + + + K++ + L KK+++ + + Sbjct: 49 DLQKFKAAVDSIQKEGNGLQPDQTSIEKKNTSPSDTKKQEDQQDQLLKKVNTYIKD---N 105 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 ++ + + G+++ + + +FD + L +L +I +L I + Sbjct: 106 HLKAQMTAKRDERGVVLVLQEA---VLFDTGEAKVLKNAETLLHQIAVLLQTIPNDIQVE 162 Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM 327 GHTD+ NW LS RA Q + R + G+A + + Sbjct: 163 GHTDSRNISTYRYPSNWELSAARASGVIQYFTSKEKLPSKRFIAV-GYADTKPVKDNKTN 221 Query: 328 N--SANRRIDILVEDRQ 342 NRR++I+++ + Sbjct: 222 EHMKENRRVEIVIKKSK 238 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 32/84 (38%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + SW + + D +T+++ FF++++ ++ D KA G L Sbjct: 10 RRNGSGKNSQSSSSWMVTFTDLITLILVFFILLFSMSQIDLQKFKAAVDSIQKEGNGLQP 69 Query: 79 ASKGIFDEQNPPERSSQNKIDLSI 102 I + P + + + Sbjct: 70 DQTSIEKKNTSPSDTKKQEDQQDQ 93 >gi|148559799|ref|YP_001259124.1| OmpA family protein [Brucella ovis ATCC 25840] gi|148371056|gb|ABQ61035.1| OmpA family protein [Brucella ovis ATCC 25840] Length = 243 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 10/150 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A GV I++++ FD + L + Sbjct: 100 NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 156 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + + + G TD++ A N LS RA S L G+ R + G+ Sbjct: 157 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-AVIGY 212 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR++I + +G Sbjct: 213 GASQPIASNATPEGRAQNRRVEIQISPLRG 242 >gi|187929665|ref|YP_001900152.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12J] gi|309781567|ref|ZP_07676302.1| inner membrane lipoprotein YiaD [Ralstonia sp. 5_7_47FAA] gi|187726555|gb|ACD27720.1| OmpA/MotB domain protein [Ralstonia pickettii 12J] gi|308919672|gb|EFP65334.1| inner membrane lipoprotein YiaD [Ralstonia sp. 5_7_47FAA] Length = 209 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD S++ P L + + L E ++ GHTD++ N LS Sbjct: 99 PSQVSFDTDSAVIKPSFRGPLDSVAQTLTQHPELAANVVGHTDST---GNPNYNLTLSQK 155 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 RA S L GV+ +R+S G ++ + + NRR++I ++ QG Sbjct: 156 RAQSVASYLTDRGVARNRLSA-EGRGQNQPVADNATEAGRAQNRRVEIYLKPIQG 209 >gi|110640466|ref|YP_668194.1| hypothetical protein ECP_0259 [Escherichia coli 536] gi|191171446|ref|ZP_03032995.1| putative chemotaxis protein [Escherichia coli F11] gi|110342058|gb|ABG68295.1| putative chemotaxis membrane protein [Escherichia coli 536] gi|190908380|gb|EDV67970.1| putative chemotaxis protein [Escherichia coli F11] gi|312944854|gb|ADR25681.1| hypothetical protein NRG857_01255 [Escherichia coli O83:H1 str. NRG 857C] gi|320197285|gb|EFW71901.1| Flagellar motor rotation protein MotB [Escherichia coli WV_060327] Length = 256 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPSKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ E+++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220 >gi|317407354|gb|EFV87320.1| OmpA-family protein [Achromobacter xylosoxidans C54] Length = 332 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 77/216 (35%), Gaps = 9/216 (4%) Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + S K D E + + + + Sbjct: 86 FPEPGETQVDIVGSLAAKGLPAYDGEYAEFDMPAIPASWAEPTAPAATASAAADAADSDG 145 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + + K S GL V+ IS N +F + P Sbjct: 146 EVVAQAAPPLKAPSKESLGLADLGNSVDVIINEQSVSFRIS-----NELLFPSGQATLSP 200 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVS 305 + V++++ +L + +S+ GH+D P + NW LS RA S + L++ GV+ Sbjct: 201 SGLDVIKRLAAILNKNDYQVSVEGHSDPVPIQTRQFASNWELSSSRATSVLRELVRDGVA 260 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 R+ + G+A R ++D +ANRR++++++ Sbjct: 261 GSRLRAV-GYAETRPIESNDTPAGRAANRRVELIMD 295 >gi|257871284|ref|ZP_05650937.1| flagellar motor protein MotB [Enterococcus gallinarum EG2] gi|257805448|gb|EEV34270.1| flagellar motor protein MotB [Enterococcus gallinarum EG2] Length = 254 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 8/182 (4%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N + ++ + +++ + Q L K L + + G+ Sbjct: 73 ETNTGKKAPTSTEAQAQEASVRTQLENQQLQKISDQLSQELASSGLKDQTEVRLESDGLH 132 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRN--IAR 282 I++ ++ +F S+ T L + + L T I I GHTD P + + Sbjct: 133 ITL---ASSILFTSGSAEITATTRQSLDLLSDSLKKLKTNKIVIAGHTDNVPEKGNGRYQ 189 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 NW LS RA + + + G ++ + I FA K ++ S NRR++++++ Sbjct: 190 SNWDLSSARAINVMEYFISKGAVLEKNAAIQAFADTEPKADNNTPQGRSENRRVEMIIQR 249 Query: 341 RQ 342 + Sbjct: 250 TE 251 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 52/122 (42%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W + Y+D +T+L+A F+VM+ + DD+ + I F + ++ Sbjct: 2 KRKKKHEEHVDEAWLLPYSDMLTLLLALFIVMFAMAKVDDEKFQEIRSEFGTILSSHHSS 61 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S I + E ++ K S + + SV ++ + +K +L + Q Sbjct: 62 SSVIGSVIDMGETNTGKKAPTSTEAQAQEASVRTQLENQQLQKISDQLSQELASSGLKDQ 121 Query: 140 SE 141 +E Sbjct: 122 TE 123 >gi|77457448|ref|YP_346953.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1] gi|77381451|gb|ABA72964.1| putative OmpA family protein [Pseudomonas fluorescens Pf0-1] Length = 240 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 8/119 (6%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARD 283 +I++ D +FD S P L + + L ++ V I + GHTD+ + Sbjct: 127 VITLND-AGNVLFDFDKSDLKPAAKSQLDTLMDKLRNADVVSIKVIGHTDS---KGSDAY 182 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 N LS RA S + L+ G++ ++++ G ++ + NRR+++ + Sbjct: 183 NQALSERRASSVAEYLLSQGLAPNKLTS-EGRGESEPVADNNTDEGRAQNRRVELHINR 240 >gi|163939534|ref|YP_001644418.1| flagellar motor protein MotS [Bacillus weihenstephanensis KBAB4] gi|163861731|gb|ABY42790.1| OmpA/MotB domain protein [Bacillus weihenstephanensis KBAB4] Length = 227 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 82/226 (36%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 6 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDAEQVDAKVMEGTI 65 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + ++ L V +N V V TGI I I+D +FD Sbjct: 66 PDISHEKNDEKAVSKKRMDELYKKLKAYVDNNGVSQVNVYREDTGISIVIVDNL---IFD 122 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297 + PE V+ ++ I + GHTD+ P N NW LS RA + Sbjct: 123 TGDANVKPEAKEVISQLVGFFQSVPNPIVVEGHTDSRPIHNENFPSNWELSSARAANMIH 182 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + ++D NRR+ I +++ Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVASNDSPQNWEKNRRVVIYIKE 227 >gi|290474940|ref|YP_003467824.1| flagellar protein [Xenorhabdus bovienii SS-2004] gi|289174257|emb|CBJ81046.1| enables flagellar motor rotation, linking torque machinery to cell wall [Xenorhabdus bovienii SS-2004] Length = 333 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 10/205 (4%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-T 202 + + + + + + + K K+RL L +++ Sbjct: 65 PLQVAINQGPQSSDSTNPIPGGGDEVFQQDGEVFRESKLVESNKEKRRLNRLHQQLDQLI 124 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ + +L + G+ I IID+ N PMF S+ +LQ I +L Sbjct: 125 ITDPRLKELRPHLLIDMMDEGLRIQIIDRENRPMFMIGSAKVESYMRDILQAIAPILNEI 184 Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-- 318 +S+ GHTD + N NW LS DRA ++ + L+ G+ E +I ++ G A Sbjct: 185 PNKVSLSGHTDNLQYANGQRGYSNWELSADRANASRRELLNGGLDEVKILRVVGMASTVS 244 Query: 319 --RLKIASDPMNSANRRIDILVEDR 341 + + P+ NRRI I+V ++ Sbjct: 245 MQKGIDPNAPV---NRRISIVVLNK 266 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 41/95 (43%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + N+ +I KK + GSWKI YADFMT +MAFFLVMW+++ +I Y Sbjct: 2 RANNVTVIRVKKRKKHGEKHCGGSWKIAYADFMTAMMAFFLVMWLLSIASPQELTSIADY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103 F + + D NP + Sbjct: 62 FRTPLQVAINQGPQSSDSTNPIPGGGDEVFQQDGE 96 >gi|229155299|ref|ZP_04283410.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342] gi|228628224|gb|EEK84940.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342] Length = 213 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 11/218 (5%) Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ L + S + K L K +D+E+ K +P +S EK Sbjct: 3 TFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDVEQVDAKIMENTIPDISHEKNDEK 62 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 K+ ++ L V +N + V TG+ + IID +FD + P Sbjct: 63 MISKK---RMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIIDNL---IFDTGDANVKP 116 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGV 304 E ++ ++ I + GHTD+ P N NW LS RA + L++ V Sbjct: 117 EAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIHHLIEVYNV 176 Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 + R++ + G+A + + +D NRR+ I +++ Sbjct: 177 DDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 213 >gi|167950042|ref|ZP_02537116.1| flagellar motor protein MotB [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 151 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 8/139 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + ET T I+I I ++ F + P V+ KI +V+A + Sbjct: 2 LDKEIDEGMLEVETEATKIIIRIQEK---GSFGSGRATLNPGFFDVISKITKVIASTPGK 58 Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKIA 323 + + GHTD P R NW LS DRA + +L G+ R+ + G A + Sbjct: 59 VVVAGHTDDIPISTKRFRSNWELSSDRAVTVVHAMLSNHGLDPSRV-SVEGHADSSPLVP 117 Query: 324 SDP--MNSANRRIDILVED 340 +D + NRR+++++E Sbjct: 118 NDSWANRAKNRRVELIIER 136 >gi|49480957|ref|YP_035848.1| flagellar motor protein MotS [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52143729|ref|YP_083099.1| flagellar motor protein MotS [Bacillus cereus E33L] gi|196033392|ref|ZP_03100804.1| putative chemotaxis protein MotB [Bacillus cereus W] gi|196039124|ref|ZP_03106431.1| putative chemotaxis protein MotB [Bacillus cereus NVH0597-99] gi|196045046|ref|ZP_03112279.1| putative chemotaxis protein MotB [Bacillus cereus 03BB108] gi|49332513|gb|AAT63159.1| chemotaxis motB protein, OmpA family [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51977198|gb|AAU18748.1| chemotaxis motB protein, OmpA family [Bacillus cereus E33L] gi|195993826|gb|EDX57782.1| putative chemotaxis protein MotB [Bacillus cereus W] gi|196024048|gb|EDX62722.1| putative chemotaxis protein MotB [Bacillus cereus 03BB108] gi|196030269|gb|EDX68869.1| putative chemotaxis protein MotB [Bacillus cereus NVH0597-99] Length = 225 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 4 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 63 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + ++ L V +N + V TG+ + I+D +FD Sbjct: 64 PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297 + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 121 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 180 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 181 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225 >gi|21230404|ref|NP_636321.1| outer membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769602|ref|YP_244364.1| outer membrane protein [Xanthomonas campestris pv. campestris str. 8004] gi|188992813|ref|YP_001904823.1| OmpA family outer membrane protein [Xanthomonas campestris pv. campestris str. B100] gi|21111963|gb|AAM40245.1| outer membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574934|gb|AAY50344.1| outer membrane protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734573|emb|CAP52783.1| OmpA family outer membrane protein [Xanthomonas campestris pv. campestris] Length = 365 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 75/252 (29%), Gaps = 19/252 (7%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 +E + G + + + + + + + D D Sbjct: 119 EEEFDATPNPVSPGQQKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPQED 178 Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV-----LF 217 + +P + + G+ + Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPTSQPGQTI 238 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 + +SI FD + S P+ + +L + E+L + + + GHTD+ Sbjct: 239 GPDGCPVPVSI--DLKGVNFDFNKSTLRPDAVSILSEATEILKRYPDLKVEVAGHTDS-- 294 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328 + N +LS RA + Y L K+GV R+ G+ R + Sbjct: 295 -KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNANPDGSDNPEGR 353 Query: 329 SANRRIDILVED 340 + NRR ++ V++ Sbjct: 354 AKNRRTELNVQN 365 >gi|241663775|ref|YP_002982135.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12D] gi|240865802|gb|ACS63463.1| OmpA/MotB domain protein [Ralstonia pickettii 12D] Length = 209 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD S++ P L + + L E ++ GHTD++ N LS Sbjct: 99 PSQVSFDTDSAVIKPSFRGPLDSVAQTLTQHPELAANVVGHTDST---GNPNYNMTLSQK 155 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 RA S L GV+ +R+S G ++ + + NRR++I ++ QG Sbjct: 156 RAQSVASYLTDRGVARNRLSA-EGRGQNQPVADNATEAGRAQNRRVEIYLKPIQG 209 >gi|255533611|ref|YP_003093983.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366] gi|255346595|gb|ACU05921.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366] Length = 440 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 72/205 (35%), Gaps = 24/205 (11%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL---------- 203 + + D + N L +K + + + DL K Sbjct: 239 HNPVALTYDEALQAKQTANALKSDLDAQKAENARLRTEMNDLLKDSDGDGVADKLDKCPG 298 Query: 204 --SGLVADNIVKGVLFETTRTGILIS------IIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +G+V D + I+I+ + D FD + ++ L ++ Sbjct: 299 TPAGVVVDGSGCPLKVPAPVEKIIITEADRKVVADAIKNLEFDLGKATIRQKSYATLNRV 358 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 E+L + + GHTD + A N RLS DRA S L+ G + RI +G+ Sbjct: 359 AELLIQKNFSLKLAGHTDNT---GSAALNMRLSKDRAESVKAYLVSQGANASRIEA-TGY 414 Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338 ++ ++ NRR++ + Sbjct: 415 GMNQPIASNKTAAGRQQNRRVEFTL 439 >gi|108763506|ref|YP_633737.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622] gi|108467386|gb|ABF92571.1| OmpA domain protein [Myxococcus xanthus DK 1622] Length = 2699 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 82/281 (29%), Gaps = 17/281 (6%) Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 P + + + + D DE + + G + Sbjct: 2417 SREPKQVAPVDTDGDGILDIDDACPTEPEDKDGFQDEDGCPDPDNDADGIPDTADTCPNE 2476 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS-KEKILAM 186 + ++ G + D + ++++ F + Sbjct: 2477 PETVNGFEDTDGCPDVAPPPPPVDTDGDGIMDPDDRCPNDPEDKDGFQDEDGCPDPDNDR 2536 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKG---VLFETTRTGILISIIDQRNTPMFDKSSSI 243 +D T++G ++ V I+I F + Sbjct: 2537 DGIPDAEDKCPNEPETINGFQDEDGCPDKGKVKVLVDGERIVI-----LEKVYFATGKDV 2591 Query: 244 PLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 L + +L+++ VL + +V + I GHTD N LS RA + L+K Sbjct: 2592 ILARSHPLLKQVAAVLRANPQVELVRIEGHTDDQ---GNDAKNLDLSQRRANNVRAFLVK 2648 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 G++E R+ + G+ + + NRR+ + Sbjct: 2649 EGIAEGRMEAV-GYGETKPVDTNKTAKGRENNRRVGFTILR 2688 >gi|95929859|ref|ZP_01312600.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684] gi|95134155|gb|EAT15813.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684] Length = 246 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 7/149 (4%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + + ++ + + + R +++ I D +F SS P VL K Sbjct: 82 VQRLYTRIMTQMNRLRMDPSIKVVKDRGAVILQINDS---ILFAPGSSTLKPAAFPVLAK 138 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE-DRISKIS 313 + E++ I GHTD PF NW LS+ R+ S + K+ + +R+S + Sbjct: 139 VAELIRPLPLSARIEGHTDDIPFGRADMSNWDLSVARSVSVLKYFQKNDLLPLNRMSAV- 197 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVED 340 G+ + + +D + NRR++ ++E Sbjct: 198 GYGAEKPLVPNDSPENRAKNRRVEFVLES 226 Score = 36.9 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 9/71 (12%), Positives = 20/71 (28%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 W + Y+D +T+L+ FF+++ + D Sbjct: 3 KKPKKQSGGAPEWMVTYSDMVTLLLTFFVLLLSMANMDQIKFSQAAGSLKGAFGVFGGKD 62 Query: 81 KGIFDEQNPPE 91 + + E Sbjct: 63 RKEISPPSLVE 73 >gi|330910071|gb|EGH38581.1| flagellar motor rotation protein MotB [Escherichia coli AA86] Length = 256 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220 >gi|347155|gb|AAC36900.1| protein F [Pseudomonas fluorescens] Length = 317 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P + ++ + + + + ++ GHTD+ N +LS RA + Sbjct: 218 FDFDKSVVKPNSYGDVKNLADFMKQYPQTTTVVEGHTDSV---GPDAYNQKLSQRRADAV 274 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 QVL+K G++ +R+S + G+ R + NRR++ Sbjct: 275 KQVLVKDGIAPNRVSSV-GYGKSRPVADNATEAGRAINRRVE 315 >gi|228914307|ref|ZP_04077922.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845301|gb|EEM90337.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 227 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 83/226 (36%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + + Sbjct: 6 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSNTEQVDAKVMENTI 65 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + ++ L V +N + V TG+ + I+D +FD Sbjct: 66 PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 122 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297 + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 182 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 227 >gi|332668363|ref|YP_004451151.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332337177|gb|AEE54278.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 312 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 103/302 (34%), Gaps = 17/302 (5%) Query: 45 MAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104 +AFF V+ + ++ K+ + + T + + N ++ + Sbjct: 8 LAFFCVLCLTFSSCVMKKQYLA---------MQTDLQTQLEAANKDLGKLGVSLNEYMSR 58 Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 ++G + Q Q K+ + DL K + Sbjct: 59 LAACERDKERLGGDIRTNQSAMQLREEQINDLKAQIADLKSQREKQLNTVTDLTKISSSA 118 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 KE L K L + R + ++ L G++ + + + + Sbjct: 119 NDNIKETLAQLERKDKYIHLLQAARTRADSINLALAVNLKGVLKEGLDDKDVDVKVDKTV 178 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI-AR 282 ++ + +F S+ + VL KI ++L + + + G+TD P + Sbjct: 179 --VFVNLSDKMLFQSGSATMTTKANEVLGKIAQILKSRPDLEVMVEGYTDNKPIKTACIE 236 Query: 283 DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 DNW LS+ RA + + L K GV +R+ G + +D NRR I++ Sbjct: 237 DNWDLSVKRATAVARTLQKTHGVDPNRLIAA-GRGEYNALATNDTEEGRSTNRRTRIIIL 295 Query: 340 DR 341 + Sbjct: 296 PK 297 >gi|296534172|ref|ZP_06896663.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gi|296265499|gb|EFH11633.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 157 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 1/141 (0%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 ++ S ++ + +L E TR G+ I ++D P+F + P +L ++ VL Sbjct: 6 AAIQSDPGLSDLARQLLIEQTREGLRIQLVDADGQPVFATGQAAPNQRGRALLLRVATVL 65 Query: 260 AHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 A + I GHTDA+PF R NW LS +RA +A +VL+++G++E+R+ ++G A Sbjct: 66 ARLPYGLDIAGHTDAAPFRGGGDRSNWELSAERAGAARRVLIEAGIAEERLRAVAGRADR 125 Query: 319 RLKIASDPMNSANRRIDILVE 339 L P+++ANRR+ ILV Sbjct: 126 DLLSPDRPLDAANRRVSILVL 146 >gi|238895326|ref|YP_002920061.1| hypothetical protein KP1_3385 [Klebsiella pneumoniae NTUH-K2044] gi|238547643|dbj|BAH63994.1| hypothetical protein KP1_3385 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 565 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 9/151 (5%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L + + ++ + V+ + + I + + +FD S P + +L Sbjct: 397 LIPFVEAAINDWAPPPPPRPVIKQVVQGPQTIRL---DSMALFDTGKSALKPGSTKLLVN 453 Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + I + GHTD+ R N +LSL RA + + +G + + Sbjct: 454 SLLGIKAKPGWLIVVAGHTDSI---GNDRSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQ 510 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G+ R +++ + NRR++I + ++ Sbjct: 511 GYGASRPVASNETPEGRAQNRRVEISLVPQK 541 >gi|254693909|ref|ZP_05155737.1| Bacterial outer membrane protein [Brucella abortus bv. 3 str. Tulya] gi|261214200|ref|ZP_05928481.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|260915807|gb|EEX82668.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str. Tulya] Length = 216 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 63/207 (30%), Gaps = 10/207 (4%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + T + + + I A + + Sbjct: 16 AGCTTDPYTGQQKVSNTTGGAAVGALGGLMVGGSSRAQRNAVLIGAGIGALGGGLIGNYM 75 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A GV I++++ FD + L + VL Sbjct: 76 DRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVAIVL 132 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + + G TD++ A N LS RA S L G+ R + G+ Sbjct: 133 RKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-SVIGYGAS 188 Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343 + +++ + NRR++I + +G Sbjct: 189 QPIVSNATPEGRAQNRRVEIQISPLRG 215 >gi|118477164|ref|YP_894315.1| flagellar motor protein MotS [Bacillus thuringiensis str. Al Hakam] gi|228945331|ref|ZP_04107686.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229183920|ref|ZP_04311136.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1] gi|301053265|ref|YP_003791476.1| flagellar motor protein [Bacillus anthracis CI] gi|118416389|gb|ABK84808.1| chemotaxis protein, MotB [Bacillus thuringiensis str. Al Hakam] gi|228599572|gb|EEK57176.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1] gi|228814303|gb|EEM60569.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|300375434|gb|ADK04338.1| flagellar motor protein [Bacillus cereus biovar anthracis str. CI] Length = 227 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 6 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 65 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + ++ L V +N + V TG+ + I+D +FD Sbjct: 66 PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 122 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297 + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 182 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 227 >gi|114571128|ref|YP_757808.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10] gi|114341590|gb|ABI66870.1| OmpA/MotB domain protein [Maricaulis maris MCS10] Length = 329 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 105/337 (31%), Gaps = 30/337 (8%) Query: 20 KVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 + D ++ + D T+L+ +++++++ + F Sbjct: 8 RFQEADNGDHWPG----FVDALATLLL---VIVFLLSIF-------VAGQFALSRALTGR 53 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN-- 136 + + + + + + + + L+ L Sbjct: 54 DEQLAALNAQLAQLADELALTQAENTELELRVSGLETERDALSDALAMAGTQTAALQAEL 113 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + E + S + D ++N + + + + +RL Sbjct: 114 DVERELSEESQRALMMLNLQIQALRDQIATLNAALDAAELRAQEAEAQVINLGERLNAAL 173 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + ++ L+ +D + RTG+ I +F S+ E L+ Sbjct: 174 AERAAELAVYRSDFFGRLRAILGNRTGVRIVGDRFVFETDVLFPSGSAALSNEGRESLRP 233 Query: 255 IGEVL--------AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 I + + + VI I GHTD P R NW LS RA S + GV Sbjct: 234 IADAIIQLTDEIPSDLEWVIRIDGHTDPVPIRTTYPSNWHLSAARAISVVNWMEDLGVPS 293 Query: 307 DRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 +R+ GF H + + NRRI++ + R Sbjct: 294 NRLVAA-GFGEHYPMVEGRSAEANARNRRIELKLTAR 329 >gi|94264078|ref|ZP_01287877.1| OmpA/MotB [delta proteobacterium MLMS-1] gi|93455494|gb|EAT05684.1| OmpA/MotB [delta proteobacterium MLMS-1] Length = 235 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 12/154 (7%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 ++ K I L + V E IL+ I D FD + + +L Sbjct: 67 EVRKPIQQVFEDLQEAGL---VTVEDQEEEILVRIQDAVA---FDTGRAEIKGDFRELLD 120 Query: 254 KIGEVLAHSTEVISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRIS 310 ++GE++ S + + GHTD P NW LS RA + + L+ + + DR++ Sbjct: 121 QLGEIIYDSQSTMVVEGHTDNVPLRPGAPFASNWELSSARAVAVVEYLINEHNIPRDRLA 180 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 ++ A + +D NRR++ + + Sbjct: 181 AVA-HADGKPVATNDTAEGRAANRRVEFRIRPGE 213 Score = 39.2 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 4/48 (8%), Positives = 16/48 (33%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 +AD +++ F +++ + D+ + + + Sbjct: 1 MTTFADIALLVLCFLILILSFSTLDEPSFLKVTGSIRTAFGVQVETPA 48 >gi|319647377|ref|ZP_08001599.1| YtxE protein [Bacillus sp. BT1B_CT2] gi|317390724|gb|EFV71529.1| YtxE protein [Bacillus sp. BT1B_CT2] Length = 229 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 64/177 (36%), Gaps = 8/177 (4%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 S + K+ K +K + + + + + + + G++ Sbjct: 54 SFQDRADGKSVAELKKDAGDQKAEKTAKSQDDLLKKINDYIEKNELSSLIAAKRDERGVI 113 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDN 284 + + + +FD + + +L KI +L + I + GHTD+ P N Sbjct: 114 LVLQEA---VLFDSGKADLKDQAHPLLHKIAVLLKSVSNPIRVEGHTDSRPISTYRFPSN 170 Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 W LS RA + + R I G+A + + + NRR++I++ Sbjct: 171 WELSAARASTVIGYFTSKEKLDSSRFLAI-GYADTKPVRDNRTESHMKENRRVEIVI 226 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 36/82 (43%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 + + + +W I ++D +T+++ FF++++ ++ D + KA F Sbjct: 4 RHERRKREQGRKSPNWIITFSDLITLILVFFILLFSMSQIDLNKFKAAVGSFQDRADGKS 63 Query: 78 TASKGIFDEQNPPERSSQNKID 99 A E++++++ D Sbjct: 64 VAELKKDAGDQKAEKTAKSQDD 85 >gi|311106780|ref|YP_003979633.1| OmpA family protein 1 [Achromobacter xylosoxidans A8] gi|310761469|gb|ADP16918.1| OmpA family protein 1 [Achromobacter xylosoxidans A8] Length = 183 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 61/158 (38%), Gaps = 11/158 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + +A + ++ L A+ + + +++ N +F + P+ Sbjct: 26 DKEAQMAAEYAALNQKLTAELSGDRAQITQLQNELKVTM---VNEILFPEGGWRLSPKGE 82 Query: 250 VVLQKIGEVLAHSTEVISI-RGHTDASPFR----NIARDNWRLSLDRAYSAYQVLMKSGV 304 L KI L++ + +G+TD P + N LS RA + + L GV Sbjct: 83 QTLAKIAPTLSNLPGQQVVVQGYTDNEPIGPELRSQFPSNLELSSARADNVARFLTSKGV 142 Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 + IS GF R ++ + NRR++I++ Sbjct: 143 PPNSISA-QGFGEARPVASNSTPQGKAQNRRVEIVITS 179 >gi|90420689|ref|ZP_01228595.1| outer membrane protein [Aurantimonas manganoxydans SI85-9A1] gi|90334980|gb|EAS48741.1| outer membrane protein [Aurantimonas manganoxydans SI85-9A1] Length = 220 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + + L GV I++++ F S LP L + Sbjct: 77 AYMDNQEAKLRDQLRGTGVSVTRVGDRIILNMPSNIT---FPTDQSSILPAFYPTLNSVA 133 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL ++++ GHTD+ N+ LS RA S Q+L GV R++ GF Sbjct: 134 LVLKEYDKSIVNVYGHTDSQ---GSDGYNFTLSQQRASSVSQLLASQGVDPRRLNT-QGF 189 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 + ++D + NRR++I + Sbjct: 190 GESQPVASNDTESGRAQNRRVEIAI 214 >gi|262275699|ref|ZP_06053508.1| outer membrane protein A precursor [Grimontia hollisae CIP 101886] gi|262219507|gb|EEY70823.1| outer membrane protein A precursor [Grimontia hollisae CIP 101886] Length = 331 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 + N +F + P L + + L + E +I GHTD+ N + Sbjct: 215 FSEADNVELFAFGKAELSPNASQQLGPMLKRLQNFDEATATIIGHTDSV---GSEAFNQK 271 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 LS RA S + +G+S +R+ I G ++ + NRR++I Sbjct: 272 LSEQRAQSVANYFISNGISAERL-TIIGKGETSPIASNKTKEGRAKNRRVEI 322 >gi|256819872|ref|YP_003141151.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256581455|gb|ACU92590.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271] Length = 360 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 8/123 (6%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282 ++ I T +FD S+ P+ +L I ++ + + + GHTD + Sbjct: 242 VVKQINLYAKTILFDTDKSVVKPQAEFILDNIAIIMNENPDFNFVVEGHTDNT---GTPE 298 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI-LVE 339 N +LS DRA + Q L + GVS+ R+ G+ R +++ NRR++I +V+ Sbjct: 299 HNLKLSQDRADAIKQYLSRHGVSKKRLDA-KGYGQTRPIESNETERGKEINRRVEINVVK 357 Query: 340 DRQ 342 D Q Sbjct: 358 DNQ 360 >gi|303325924|ref|ZP_07356367.1| putative chemotaxis MotB protein [Desulfovibrio sp. 3_1_syn3] gi|302863840|gb|EFL86771.1| putative chemotaxis MotB protein [Desulfovibrio sp. 3_1_syn3] Length = 235 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 4/200 (2%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 TR + S + N + + + ++ I+ + Sbjct: 30 PPETRAGLAAYFSGERNFDSSSTSPVSNNPFIQNTDKIDTRDLKINEVEKSHYAIAQKIK 89 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 ++ + V + + + + + MF S LPE VL + ++L Sbjct: 90 QMLMADAVPQSSSGISADDVGVQLRVNSD-VMFKAGSVDFLPEGEKVLGSVLQILKEYNL 148 Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA- 323 + +RGH D++ R W LS RA + L GV R+ ++ + R Sbjct: 149 YLVVRGHADSTEARPPYASAWELSGARAAAVLHYLADHGVKPTRLRGVA-YGDTRPLKPG 207 Query: 324 -SDPMNSANRRIDILVEDRQ 342 + + NRR++ + Sbjct: 208 IDEESRAVNRRVEFFFHRPE 227 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 40/73 (54%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 +WK+ YADF+T +MAFFL++W++N +T+ + YF+ +++ + + Sbjct: 4 AWKVAYADFVTAMMAFFLLLWVLNMVPPETRAGLAAYFSGERNFDSSSTSPVSNNPFIQN 63 Query: 92 RSSQNKIDLSIDE 104 + DL I+E Sbjct: 64 TDKIDTRDLKINE 76 >gi|227884752|ref|ZP_04002557.1| chemotaxis protein [Escherichia coli 83972] gi|227838353|gb|EEJ48819.1| chemotaxis protein [Escherichia coli 83972] gi|307552161|gb|ADN44936.1| putative motility protein [Escherichia coli ABU 83972] Length = 256 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 93/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220 >gi|326203246|ref|ZP_08193111.1| OmpA/MotB domain protein [Clostridium papyrosolvens DSM 2782] gi|325986504|gb|EGD47335.1| OmpA/MotB domain protein [Clostridium papyrosolvens DSM 2782] Length = 258 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP- 246 ++++ L ++IS + + + V GI+++I ++ +F S+I P Sbjct: 89 EDQQMEALQEEISGLVDS---EGLKGNVSVTMQERGIVVTINEK---ILFKSGSAIIEPN 142 Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGV 304 + V++ ++L+ I + GHTD P ++ NW LS RA + ++L+ G Sbjct: 143 DQDTVIKIGKDILSKIPNKHIRVEGHTDNIPMKSALYPSNWELSAARAINVLKLLVDKGG 202 Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 ++ + + + + + NRR+DI++ Sbjct: 203 INPKMIAPVPYGEYSPLVPNTTDINRAKNRRVDIVILRD 241 Score = 45.3 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 13/114 (11%), Positives = 33/114 (28%), Gaps = 8/114 (7%) Query: 29 NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF--------NPFGKNLMTAS 80 N W + YAD M +L+ F++++ ++ + + + + Q P ++ Sbjct: 10 NAERWLLTYADLMNLLLILFIILYSMSQVNTEKFQQLSQSLSSAFGNGERPSVVQGGSSG 69 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + D + + + S K + Sbjct: 70 NSLIDFPATMPSPVIPSKIEDQQMEALQEEISGLVDSEGLKGNVSVTMQERGIV 123 >gi|104780439|ref|YP_606937.1| OmpA family outer membrane protein [Pseudomonas entomophila L48] gi|95109426|emb|CAK14127.1| putative outer memebrane protein, OmpA family [Pseudomonas entomophila L48] Length = 239 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 7/116 (6%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + +D + +F +S L + L + I + GHTD+ N Sbjct: 127 VITLDDQGQVLFAFNSDRLEAGAQERLHNLLPKLNDPSVLSIKVIGHTDSV---GSDSYN 183 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 LS RA S + L+ G++ ++++ G +D NRR+++ + Sbjct: 184 QGLSERRASSVAEYLISQGLAPEKVTS-QGRGESEPVADNDTEEGRAHNRRVELHL 238 >gi|218929795|ref|YP_002347670.1| putative OmpA family protein [Yersinia pestis CO92] gi|115348406|emb|CAL21342.1| putative OmpA family protein [Yersinia pestis CO92] Length = 261 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290 + MF S PE I V++++ + + I I GHTD+ P + +N LS Sbjct: 151 KGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEK 210 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 RA + + + ++G+ D+I + G + ++D S NRR++I V Sbjct: 211 RAANVARYMEQAGIPTDKI-RFEGKGETQPVSSNDDATGRSQNRRVEIFV 259 >gi|186472491|ref|YP_001859833.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815] gi|184194823|gb|ACC72787.1| OmpA/MotB domain protein [Burkholderia phymatum STM815] Length = 166 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 9/151 (5%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L LA S N G+ T+ G+ + + ++ +F+ + S P+ Sbjct: 14 LSMLAACGGLDRSKEETLNKQAGIEVTQTKEGVQVRLPEK---VLFNFNESSLRPDAATA 70 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 L ++ VL + + + I GHTD N +LS RA S L + G+S RI Sbjct: 71 LSRVVVVLNRTHKPMIIEGHTDNV---GTREYNQQLSEARAKSVADELERRGISASRI-T 126 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVED 340 + G+A R ++ + NRR +I+V Sbjct: 127 LKGYAFDRPVADNNTPEGRARNRRTEIVVMG 157 >gi|332975535|gb|EGK12425.1| OmpA domain protein [Desmospora sp. 8437] Length = 243 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 7/113 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD S + L K+G+ L + I G+TD A N +LS +R Sbjct: 135 PGHILFDTDQSTIRAKARPELDKLGKSLKEYKGTVRIYGYTDDR---GSAAYNQKLSQER 191 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 A + L+K G++ D + I GF + + D NRR++I+V+ + Sbjct: 192 AEAVKAYLVKECGIAGDHLK-IKGFGKKHPVVPNNSDSNRQKNRRVEIIVDSK 243 >gi|228926763|ref|ZP_04089831.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228832876|gb|EEM78445.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 227 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 82/226 (36%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 6 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 65 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + ++ L + +N + V TG+ + I+D +FD Sbjct: 66 PDISHEKNDEKMISKKRMDELYKKLKAYLDNNGISQVNVYREDTGVSVVIVDNL---IFD 122 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297 + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 182 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 227 >gi|16080024|ref|NP_390850.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis str. 168] gi|221310916|ref|ZP_03592763.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis str. 168] gi|221315243|ref|ZP_03597048.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320160|ref|ZP_03601454.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis str. JH642] gi|221324441|ref|ZP_03605735.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis str. SMY] gi|732300|sp|P39064|YTXE_BACSU RecName: Full=Uncharacterized protein YtxE gi|348049|gb|AAA68283.1| putative [Bacillus subtilis] gi|2293223|gb|AAC00301.1| YtxE [Bacillus subtilis] gi|2635456|emb|CAB14950.1| putative flagellar motor apparatus component [Bacillus subtilis subsp. subtilis str. 168] gi|291485404|dbj|BAI86479.1| flagellar motor protein MotS [Bacillus subtilis subsp. natto BEST195] Length = 242 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 76/197 (38%), Gaps = 11/197 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 D +K K S E + + + + + K++ + L KK+++ + + Sbjct: 49 DLQKFKAAVDSIQKEGNGLQPDQTSIEKKNTSPSDTKKQEDQQDQLLKKVNTYIKD---N 105 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 ++ + + G+++ + + +FD + L +L +I +L I + Sbjct: 106 HLKAQMTAKRDERGVVLVLQEA---VLFDTGEAKVLKNAETLLHQIAVLLQTIPNDIQVE 162 Query: 270 GHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM 327 GHTD+ NW LS RA Q + R + G+A + + Sbjct: 163 GHTDSRNISTYRYPSNWELSAARASGVIQYFTSKEKLPSKRFIAV-GYADTKPVKDNKTN 221 Query: 328 N--SANRRIDILVEDRQ 342 NRR++I+++ + Sbjct: 222 EHMKENRRVEIVIKKSK 238 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 32/84 (38%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + SW + + D +T+++ FF++++ ++ D KA G L Sbjct: 10 RRNGSGKNSQSSSSWMVTFTDLITLILVFFILLFSMSQIDLQKFKAAVDSIQKEGNGLQP 69 Query: 79 ASKGIFDEQNPPERSSQNKIDLSI 102 I + P + + + Sbjct: 70 DQTSIEKKNTSPSDTKKQEDQQDQ 93 >gi|310814625|ref|YP_003962589.1| OmpA family protein [Ketogulonicigenium vulgare Y25] gi|308753360|gb|ADO41289.1| OmpA family protein [Ketogulonicigenium vulgare Y25] Length = 227 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 61/153 (39%), Gaps = 10/153 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + A+ + + + V + +++ +F +S+ ++ L Sbjct: 82 RQEAELARARQEAELRQQLGGNVGIVNNGQNLTVTMPQD---VLFGTNSTAVSIQSQTDL 138 Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + L IS+ GHTD++ A N LS+ RA + VL+ GV+ R+ Sbjct: 139 RTVAASLNRYPNTSISVIGHTDST---GSASYNQDLSVRRAQAVASVLINGGVAPARVYT 195 Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G + ++ + NRR++I++ Sbjct: 196 V-GRGASQPIASNATPDGRQLNRRVEIIITPTN 227 >gi|228471770|ref|ZP_04056543.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624] gi|228276923|gb|EEK15618.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624] Length = 455 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 72/270 (26%), Gaps = 27/270 (10%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P K+ G+ + P+ D K + ++ Sbjct: 205 PDNKDACPEVPGLKEFNGCPDTDGDGIPDKDDACPQVKGPKEFNGCPDTDGDGIPDKDDA 264 Query: 131 IFYLSNSQQSEHCKNS-LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 ++ ++ C ++ +K ++ +K Sbjct: 265 CPEVAGPKEFNGCPDTDGDGIPDKDDKCPDVAGPAENGGCPWPDTDGDGVLDKDDLCPEV 324 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + T +FD + ++ Sbjct: 325 AGPASNKGCPEPDEKEQK-------------------QLNQYAKTILFDTGKATIKFQSA 365 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 VL +I VL I GHTD++ N LS +RA + L++ G+ R Sbjct: 366 EVLNQIINVLKKYPNSRFRIEGHTDST---GKKAKNMILSQNRADAVKVYLIQGGIDAGR 422 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDI 336 + GF + ++ NRR++I Sbjct: 423 LES-QGFGPEKPIASNKNKKGRELNRRVEI 451 >gi|239827803|ref|YP_002950427.1| flagellar motor protein MotB [Geobacillus sp. WCH70] gi|239808096|gb|ACS25161.1| OmpA/MotB domain protein [Geobacillus sp. WCH70] Length = 251 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 77/184 (41%), Gaps = 7/184 (3%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 D E I E ++ K+ ++L + + ++ + T Sbjct: 65 DFESPIEPETPPSPSKQEHKQQQKNSNKEDKEELHAVQEKIDTYIAEKHLNGKLQTSLTD 124 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI 280 G+ I+I++ +FD S+ P+ + ++I ++L + I I GHTD P N Sbjct: 125 EGLAITILND---ILFDSGSAEVRPKDRKLAKEISQLLVMNPPRNIIISGHTDNVPIHNA 181 Query: 281 -ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 NW LS+ RA + ++L+++ + R G+ + ++ NRR++IL Sbjct: 182 QFASNWELSVMRAINFMKILLENPELDPRWFSAKGYGEFKPVAPNNTPEGRMKNRRVEIL 241 Query: 338 VEDR 341 + + Sbjct: 242 ILPK 245 Score = 52.7 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 4/101 (3%) Query: 28 NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQ 87 + SW I Y+D +T+L+A F+V++ + D + I + FN G+ D + Sbjct: 12 HINESWLIPYSDLLTLLLALFIVLFASSQIDQKKFQQIARSFNTALA----GGTGVLDFE 67 Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 +P E + + KNS + ++ Sbjct: 68 SPIEPETPPSPSKQEHKQQQKNSNKEDKEELHAVQEKIDTY 108 >gi|220918973|ref|YP_002494277.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956827|gb|ACL67211.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 544 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 34/295 (11%), Positives = 88/295 (29%), Gaps = 19/295 (6%) Query: 56 ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS----SQNKIDLSIDEHITKNSV 111 + + + + F + + P R + + Sbjct: 260 SQNAELLAGVRYGFGEGEIYALGGPGFMESPGTPTYRGLIGFAFTGGKKAAPPPPPPPPD 319 Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 G ++ +Q L+++ ++N Q + + + + +++ Sbjct: 320 PCAAGQSHTPEQCPTLDDDGDGVANGQDRCPLEKGVAENQGCPDKDTDGDGVPDRLDRCP 379 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + ++ + D + + + + D Sbjct: 380 SVPGATDNQGCPKDSDKDGVPDDKDRCPDKPGIPENQGCPPERAEIKAGKI-------DI 432 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSL 289 + FD ++ +L + +++ V++I GHTD++ A N LS Sbjct: 433 KEKVYFDTGKDTIKAKSNALLDDVAKLVAANPQVGVVTIEGHTDST---GSAATNRALSQ 489 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA + L+ GV R+ GF + ++ NRR++ +++ Sbjct: 490 KRAEAVKDYLVSKGVDASRLEA-KGFGPDQPVESNKTAKGREANRRVEFTIQNAN 543 >gi|325523338|gb|EGD01688.1| Outer membrane protein [Burkholderia sp. TJI49] Length = 552 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 47/114 (41%), Gaps = 8/114 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + +FD + P++ + E++ + + G+TD N +LS+ Sbjct: 440 DSMSLFDSGKAQLKPDSTRAMVGALEMIKTHPDKRILVAGYTDNV---GHPDSNLKLSVA 496 Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA + L+++ G+ + I G+ R +D + NRR++I + Sbjct: 497 RAQAVRDWLIEASGIPATQF-AIQGYGDTRPIADNDTPEGRARNRRVEITLVPD 549 >gi|225627675|ref|ZP_03785712.1| OmpA family protein [Brucella ceti str. Cudo] gi|225617680|gb|EEH14725.1| OmpA family protein [Brucella ceti str. Cudo] Length = 243 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 10/150 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A GV I++++ FD + L + Sbjct: 100 NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 156 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + + + G TD++ A N LS RA S L G+ R + G+ Sbjct: 157 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-AVIGY 212 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR++I + +G Sbjct: 213 GASQPIASNATPEGRAQNRRVEIQISPLRG 242 >gi|169633170|ref|YP_001706906.1| hypothetical protein ABSDF1479 [Acinetobacter baumannii SDF] gi|169151962|emb|CAP00823.1| conserved hypothetical protein; putative bacterial outer membrane domain [Acinetobacter baumannii] Length = 471 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 71/225 (31%), Gaps = 17/225 (7%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 T+Q + + SL +K +++ + +P Sbjct: 259 DTSQTYAAAFTDKDALAGVLGALKGIPNASLEWVGDKITLKAGDAAALEALTAKVKALVP 318 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 ++ + + + L+ + +N+ + L + I+ Sbjct: 319 HTEVVATAPETAEQSVSNSLSASQTALTAIDPNNVDENALVKALNLQIIN---------- 368 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS + +L + +L + V + GHTD++ A N LS RA + Sbjct: 369 FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDST---GNAAANKALSQRRAQAV 425 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ GV ++ G + + NRRI+ V Sbjct: 426 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 469 >gi|83589634|ref|YP_429643.1| OmpA/MotB [Moorella thermoacetica ATCC 39073] gi|83572548|gb|ABC19100.1| OmpA/MotB [Moorella thermoacetica ATCC 39073] Length = 256 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 69/176 (39%), Gaps = 8/176 (4%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + E P + + A R Q++ + + + L A+ + V GI + Sbjct: 67 VETEPAPSNYPENLQTPEAAAALARAQEMMQTYQTVKNFLTANGLESEVEVRYEDRGIAL 126 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNW 285 D + +FD + PE +L K+ +L+ + + G+TD P NW Sbjct: 127 ---DIKERILFDSGRADLKPEARQLLDKLSGLLSRLPNEVKVEGYTDNRPIHTVQFPTNW 183 Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 LS RA + + + + DR I G+ + +D + NRR+ +L+ Sbjct: 184 ELSTARAARVVRYFIEEHHLQPDRFMAI-GYGEYHPLYPNDSPEHMAENRRVVLLL 238 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 2/78 (2%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +KK + +W I Y+D MT L+ FF++++ + + + + G Sbjct: 3 VKKWQKKSEE--GAPTWMITYSDLMTQLVVFFVLLFSFSVINQQKFQQFIASYQGMGILD 60 Query: 77 MTASKGIFDEQNPPERSS 94 S + E P Sbjct: 61 GGVSPIVETEPAPSNYPE 78 >gi|78358626|ref|YP_390075.1| chemotaxis protein MotB [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221031|gb|ABB40380.1| chemotaxis protein MotB [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 242 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 8/168 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L + M++ +RL+DL + + + + G+ I + D + Sbjct: 75 ELLESPRDVMQKPERLKDLLWPEDMLPPEVDTATLDENLRIMQDPQGLAIVLTD---GVL 131 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F S +L + +VL +S+ ++I GHTD SP DN+ LS RA + Sbjct: 132 FRPGSWELTAPARKLLAPLADVLEYSSADVTISGHTDDSPASG--VDNYDLSGRRAMAVL 189 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 ++SG+ +R +SG+ + ++ + NRR++IL++ Q Sbjct: 190 DFFLESGLGAERF-SVSGYGPDKPLESNATPQGRAQNRRVEILLKTTQ 236 >gi|289664228|ref|ZP_06485809.1| OmpA family outer membrane protein [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668820|ref|ZP_06489895.1| OmpA family outer membrane protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 365 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 77/254 (30%), Gaps = 23/254 (9%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 +E + G + + + + + + + D D Sbjct: 119 EEEFDATPNPVSPGQQKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPRED 178 Query: 163 LEKSINKEENYFLP-------PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + +P L D +++ + + Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPNSQPGQTI 238 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + + I + FD + S P+ I +L + E+L + + + GHTD+ Sbjct: 239 GPDGCPVPVSIDLKGVN----FDFNKSTLRPDAISILSEATEILKRYPDLKVEVAGHTDS 294 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------P 326 + N +LS RA + Y L K+GV R+ G+ R + Sbjct: 295 ---KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDGSDNPE 351 Query: 327 MNSANRRIDILVED 340 + NRR ++ V++ Sbjct: 352 GRAKNRRTELNVQN 365 >gi|217959212|ref|YP_002337760.1| flagellar motor protein MotS [Bacillus cereus AH187] gi|217063689|gb|ACJ77939.1| putative chemotaxis protein MotB [Bacillus cereus AH187] Length = 225 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 4 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 63 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + + L V +N + V TG+ + I+D +FD Sbjct: 64 PDISHEKNDEKTVSKKRMDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297 + PE ++ K+ I + GHTD+ P N NW LS RA + Sbjct: 121 TGDANVKPEAKEIISKLVGFFQSVPNSIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 180 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 181 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225 >gi|328958273|ref|YP_004375659.1| uncharacterized protein YtxE [Carnobacterium sp. 17-4] gi|328674597|gb|AEB30643.1| uncharacterized protein YtxE [Carnobacterium sp. 17-4] Length = 205 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 10/207 (4%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DLAKKISS 201 SL + E + + + SI +E E I A + L +L K + Sbjct: 2 SSVSLEKFQEASNSIQSAFNGGDSIIEESIKDTETEPSEDITAAPSEDSLDPELIKMYNE 61 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 ++ L A+ + E + GI ++I + +F S+I L + +++ Sbjct: 62 VVAFLEANEMTAQASVEYDQDGIYVNIQES---ILFGSGSAIIAESGESTLNGLSDLIQQ 118 Query: 262 STEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHR 319 + + G+TD P N NW LS RA S + L + V R+S G+ + Sbjct: 119 FENDVVVEGYTDDVPMNNSIFSSNWELSTGRALSVLRYLSEERSVDPTRLSA-KGYGEYH 177 Query: 320 LKIASDPMN--SANRRIDILVE-DRQG 343 +D NRR++I++ DRQG Sbjct: 178 PISPNDSEENKEKNRRVNIVLVYDRQG 204 >gi|73539085|ref|YP_299452.1| OmpA/MotB [Ralstonia eutropha JMP134] gi|72122422|gb|AAZ64608.1| OmpA/MotB [Ralstonia eutropha JMP134] Length = 575 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 70/187 (37%), Gaps = 22/187 (11%) Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI-------- 226 + K+ +L + S+ + + +G ++ Sbjct: 377 AEHDAARVDALQALKRDRDELEQYQSAGVPPRLGLGFYRGAKLLAPLNTLIAGYQPPAPP 436 Query: 227 -SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDN 284 S I+ + +F S++ P + VL E++ + + GHTDA A+ N Sbjct: 437 PSTIELNSLSLFKSGSAVLNPGSNRVLIGALELIKAHPDKRVLVAGHTDAV---GAAQSN 493 Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV--- 338 +LS RA S L + G+ R I G+ R K +D NRR++I + Sbjct: 494 LKLSEARAASVRDWLADAAGLPVTRF-AIQGYGDTRPKAPNDTEAGRSANRRVEITLVPD 552 Query: 339 --EDRQG 343 +DR+G Sbjct: 553 CHDDRRG 559 >gi|83746716|ref|ZP_00943765.1| Hypothetical Protein RRSL_03628 [Ralstonia solanacearum UW551] gi|207721381|ref|YP_002251822.1| bacterial outer membrane protein [Ralstonia solanacearum MolK2] gi|207742640|ref|YP_002259032.1| bacterial outer membrane protein [Ralstonia solanacearum IPO1609] gi|83726669|gb|EAP73798.1| Hypothetical Protein RRSL_03628 [Ralstonia solanacearum UW551] gi|206586540|emb|CAQ17127.1| bacterial outer membrane protein [Ralstonia solanacearum MolK2] gi|206594034|emb|CAQ60961.1| bacterial outer membrane protein [Ralstonia solanacearum IPO1609] Length = 209 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD S++ P L + E L E S+ GHTD++ N LS Sbjct: 99 PSQVSFDTDSAMIKPSFRGPLDSVAETLTQHPELAASVVGHTDST---GNPNYNMSLSQR 155 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 RA S L GV+ +R++ G + + + NRR++I ++ QG Sbjct: 156 RAQSVTSYLTDRGVARNRLTA-EGRGQTQPVGDNATEAGRAQNRRVEIYLKPIQG 209 >gi|149370978|ref|ZP_01890573.1| outer membrane protein, OmpA family [unidentified eubacterium SCB49] gi|149355764|gb|EDM44322.1| outer membrane protein, OmpA family [unidentified eubacterium SCB49] Length = 323 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 107/292 (36%), Gaps = 16/292 (5%) Query: 59 DDTKKAI----EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 D +A+ + +S G+ + ++ +K L++D + D Sbjct: 29 QDKYEALKVENASLMSQLDNVEGASSIGLEQIKEDLQKCKSDKTQLAMDLAGAQAKYDKI 88 Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 G + + + N + + K DL + + K + Sbjct: 89 KGDYDALEANSSENLSENLDRNRALLTELEAKERILNTKEADLIEQEKVLKRAQNNLDAS 148 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + + + + ++ ++ L IS+ L+ + + E + +S+ N Sbjct: 149 AARVLELEGIIAAKEAQMDALKNAISAALTSFEGNGL----TVEQREGKVYVSM---ENK 201 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF--RNIARDNWRLSLDR 291 +F+ S + +G+VL + E+ I GHTD P+ + + +DNW LS R Sbjct: 202 LLFESGSWDVNSRGREAVVALGKVLGDNKEIAVLIEGHTDNVPYGEKGLIKDNWDLSTKR 261 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 A + +L ++ +G + +++ + NRRI++++ + Sbjct: 262 ATAIVAILTENNNIPKENLTAAGRGEYAPIASNNTSEGKAKNRRIEVVLTPK 313 >gi|229138428|ref|ZP_04267017.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26] gi|228644965|gb|EEL01208.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26] Length = 213 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 13/219 (5%) Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ L + S + K L K +D E+ K +P +S EK Sbjct: 3 TFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTIPDISHEKNDEK 62 Query: 187 K-RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 KKR+ DL KK+ + V +N + V TG+ + I+D +FD + Sbjct: 63 TVSKKRMDDLYKKLKAY----VDNNGISQVNVYREDTGVSVVIVDNL---IFDTGDANVK 115 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SG 303 PE ++ K+ I + GHTD+ P N NW LS RA + L++ Sbjct: 116 PEAKEIISKLVGFFQSVPNSIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYN 175 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 V + R++ + G+A + + +D NRR+ I +++ Sbjct: 176 VDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 213 >gi|167467398|ref|ZP_02332102.1| possible OmpA/MotB family protein [Yersinia pestis FV-1] Length = 263 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290 + MF S PE I V++++ + + I I GHTD+ P + +N LS Sbjct: 153 KGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEK 212 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 RA + + + ++G+ D+I + G + ++D S NRR++I V Sbjct: 213 RAANVARYMEQAGIPTDKI-RFEGKGETQPVSSNDDATGRSQNRRVEIFV 261 >gi|78046598|ref|YP_362773.1| OmpA family outer membrane protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325925345|ref|ZP_08186747.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas perforans 91-118] gi|78035028|emb|CAJ22673.1| OmpA family outer membrane protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325544223|gb|EGD15604.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas perforans 91-118] Length = 365 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 23/254 (9%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 +E + G + + + + + + + D D Sbjct: 119 EEEFDATPNPVSPGQQKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPRED 178 Query: 163 LEKSINKEENYFLP-------PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + +P L D +++ + + Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPNSQPGQTI 238 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + + I + FD + S P+ + +L + E+L + + + GHTD+ Sbjct: 239 GPDGCPVPVSIDLKGVN----FDFNKSTLRPDAVSILSEATEILKRYPDLKVEVAGHTDS 294 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------P 326 + N +LS RA + Y L K+GV R+ G+ R + Sbjct: 295 ---KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDGSDNPE 351 Query: 327 MNSANRRIDILVED 340 + NRR ++ V++ Sbjct: 352 GRAKNRRTELNVQN 365 >gi|291613031|ref|YP_003523188.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1] gi|291583143|gb|ADE10801.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1] Length = 259 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 10/166 (6%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 ++ + K+ + +Q+LAK ++++++ V + + T G+ + I +F Sbjct: 86 ARLAEIQRKQNESMQNLAKDLNASMASFVKNG---QMNVSQTGRGVELEINAS---ALFK 139 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297 + + PE + L +VLA + I + GHTD P NW LS RA S + Sbjct: 140 QGEADIEPEALKTLADAAKVLAGNDFAIEVEGHTDNLPISTPKFPSNWELSSARASSVVR 199 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + + G++ R+ + G A ++ ++D + NRR+ I V + Sbjct: 200 LFIDQGITAKRLKAV-GSADNQPVDSNDTPEGRARNRRVTITVLNP 244 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + ++ + + W + YADF+T+L AFF+VM+ I++ ++ K N Sbjct: 1 MARRPKRAEHDNH--ERWMVSYADFITLLFAFFVVMYGISSVNEGKYKVFSVSVNQAFGA 58 Query: 76 LMTASKG 82 A +G Sbjct: 59 NGKAGEG 65 >gi|300823443|ref|ZP_07103573.1| OmpA family protein [Escherichia coli MS 119-7] gi|300524061|gb|EFK45130.1| OmpA family protein [Escherichia coli MS 119-7] gi|320201151|gb|EFW75734.1| Flagellar motor rotation protein MotB [Escherichia coli EC4100B] Length = 256 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 92/205 (44%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + + +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTVLLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKRLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 196 DQMLLDSKNPQSAGNRRIEIMVLTK 220 >gi|146276251|ref|YP_001166410.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145554492|gb|ABP69105.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 228 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 60/147 (40%), Gaps = 10/147 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + L V T + +++++ +F S+ P+ L + + Sbjct: 89 LDRQAADLRNSIGNSQVSVTNTGSELVVTMPQD---ILFATDSANLRPDLQRDLAAVAQN 145 Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L I + GHTD++ A N LS+ RA S VL+ +GV R++ + G Sbjct: 146 LLRYPNSTIMVVGHTDST---GSAAYNQDLSMRRAQSVAGVLIGNGVPSYRVASL-GRGE 201 Query: 318 HRLKIASDP--MNSANRRIDILVEDRQ 342 + ++ + NRR+DI++ Sbjct: 202 DQPIASNLTPEGRAQNRRVDIIIRPTN 228 >gi|224373377|ref|YP_002607749.1| major outer membrane protein [Nautilia profundicola AmH] gi|223589055|gb|ACM92791.1| major outer membrane protein [Nautilia profundicola AmH] Length = 209 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 9/111 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + ++ LQK+ E+L ++ I + GHTD N +LS RA + Sbjct: 103 FDFNKAVVKKIYYPELQKVAEILKNNPNLKIEVAGHTDNI---GSDEYNLKLSQKRAEAV 159 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL-VEDRQ 342 +L+ G+ RI G+ + + + + NRR++I+ + ++Q Sbjct: 160 KNILVNKFGIDPSRIVA-KGYGEKYPLVPNTTETNRALNRRVEIVNITNKQ 209 >gi|218552836|ref|YP_002385749.1| hypothetical protein ECIAI1_0271 [Escherichia coli IAI1] gi|218693715|ref|YP_002401382.1| hypothetical protein EC55989_0255 [Escherichia coli 55989] gi|218350447|emb|CAU96134.1| flagellar system protein [Escherichia coli 55989] gi|218359604|emb|CAQ97145.1| flagellar system protein [Escherichia coli IAI1] Length = 296 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 92/205 (44%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + + +KK +L Sbjct: 56 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTVLLKKKSATELG 115 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 116 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKRLLVELA 175 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 176 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 235 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 236 DQMLLDAKNPQSAGNRRIEIMVLTK 260 >gi|294012887|ref|YP_003546347.1| OmpA-family protein [Sphingobium japonicum UT26S] gi|292676217|dbj|BAI97735.1| OmpA-family protein [Sphingobium japonicum UT26S] Length = 226 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 67/211 (31%), Gaps = 10/211 (4%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + + N+ R K L + + +++ + A Sbjct: 13 LAAMLATTACTTDPNTGNRTISKAAIGGIGGALGGYLLGDLVGGRHDRTEKILGAGIGAV 72 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + + L + GV +++ + + F SS P+ Sbjct: 73 AGAGIGAYMDAQERKLREETAGSGVDVIRDGDNLVLRM---PSGITFATDSSAVQPQFQP 129 Query: 251 VLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L + VLA I + GHTD+ N LS RA + L GV RI Sbjct: 130 TLNDVASVLAQYPKTYIDVYGHTDSD---GTDTYNQALSERRAQAVGDYLTTHGVQSARI 186 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338 GF + ++ NRR++I + Sbjct: 187 -ATRGFGETQPIASNATAEGKASNRRVEIKI 216 >gi|94270700|ref|ZP_01291804.1| OmpA/MotB [delta proteobacterium MLMS-1] gi|93450704|gb|EAT01786.1| OmpA/MotB [delta proteobacterium MLMS-1] Length = 227 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 12/154 (7%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 ++ K I L + V E IL+ I D FD + + +L Sbjct: 59 EVRKPIQQVFEDLQEAGL---VTVEDQEEEILVRIQDAVA---FDTGRAEIKGDFRELLD 112 Query: 254 KIGEVLAHSTEVISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRIS 310 ++GE++ S + + GHTD P NW LS RA + + L+ + + DR++ Sbjct: 113 QLGEIIYDSQSTMVVEGHTDNVPLRPGAPFASNWELSSARAVAVVEYLINEHNIPRDRLA 172 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 ++ A + +D NRR++ + + Sbjct: 173 AVA-HADGKPVATNDTAEGRAANRRVEFRIRPGE 205 >gi|169796598|ref|YP_001714391.1| hypothetical protein ABAYE2575 [Acinetobacter baumannii AYE] gi|215484059|ref|YP_002326284.1| OmpA family protein [Acinetobacter baumannii AB307-0294] gi|301344741|ref|ZP_07225482.1| OmpA family protein [Acinetobacter baumannii AB056] gi|301510762|ref|ZP_07235999.1| OmpA family protein [Acinetobacter baumannii AB058] gi|301595171|ref|ZP_07240179.1| OmpA family protein [Acinetobacter baumannii AB059] gi|332853538|ref|ZP_08434802.1| OmpA family protein [Acinetobacter baumannii 6013150] gi|332868403|ref|ZP_08438134.1| OmpA family protein [Acinetobacter baumannii 6013113] gi|169149525|emb|CAM87414.1| conserved hypothetical protein; putative bacterial outer membrane domain [Acinetobacter baumannii AYE] gi|213987872|gb|ACJ58171.1| OmpA family protein [Acinetobacter baumannii AB307-0294] gi|332728571|gb|EGJ59943.1| OmpA family protein [Acinetobacter baumannii 6013150] gi|332733402|gb|EGJ64585.1| OmpA family protein [Acinetobacter baumannii 6013113] Length = 471 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 70/225 (31%), Gaps = 17/225 (7%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 T+Q + + SL +K +++ + +P Sbjct: 259 DTSQTYAAAFTDKDALAGVLGALKGIPNASLEWVGDKITLKAGDAAALEALTAKVKALVP 318 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 ++ + + + L+ + +N+ L + I+ Sbjct: 319 HTEVVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN---------- 368 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS + +L + +L T V + GHTD++ A N LS RA + Sbjct: 369 FASGSSDIPADNKAILDQAATLLNKVTGVKLDVGGHTDST---GNAAANKALSQRRAQAV 425 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ GV ++ G + + NRRI+ V Sbjct: 426 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 469 >gi|261380420|ref|ZP_05984993.1| OmpA family protein [Neisseria subflava NJ9703] gi|284796655|gb|EFC52002.1| OmpA family protein [Neisseria subflava NJ9703] Length = 411 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 75/182 (41%), Gaps = 15/182 (8%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 ++ S+ + N ++ K+ ++ K++ ++ L +A + V E + Sbjct: 217 MQWSLGDKFNTASTKVNSLKLPSVITKQQDTQKTVRLRPLLENEIARKL---VSVEDFQD 273 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IA 281 ++I+ +F+ S+ + VL + + L I + G+TD P ++ Sbjct: 274 RSTVTIL---GDGLFESGSAQIQDQYYPVLAAVSQALDSVEGQIIVTGYTDNQPIQSLNF 330 Query: 282 RDNWRLSLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 NW LS RA + ++L +K+G RI G +D + NRR++I Sbjct: 331 PSNWHLSQARADAVKEILLNYVKNG--GTRIRS-EGRGSTDPVAPNDTLENRAKNRRVEI 387 Query: 337 LV 338 + Sbjct: 388 TL 389 >gi|149925845|ref|ZP_01914109.1| outer membrane protein, OmpA/MotB family [Limnobacter sp. MED105] gi|149825962|gb|EDM85170.1| outer membrane protein, OmpA/MotB family [Limnobacter sp. MED105] Length = 222 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 7/116 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 ++D +FD + S + L +I L + I + G+TD++ + N Sbjct: 111 MLDIPGAALFDTNKSDVKAQFAGTLDQIAATLRDNPNTIVCVIGYTDST---GSDQYNQD 167 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 LS+ RA S L G+S R++ G ++D + NRR+++ V + Sbjct: 168 LSVRRAQSVTNFLTAKGISGARLTAA-GLGEGFPVASNDTESGRAQNRRVEMYVRN 222 >gi|126668169|ref|ZP_01739130.1| Flagellar motor protein [Marinobacter sp. ELB17] gi|126627318|gb|EAZ97954.1| Flagellar motor protein [Marinobacter sp. ELB17] Length = 279 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-TLSGLVAD 209 + G K +D S++ ++ P ++ + + ++S + L + Sbjct: 71 DDGGSLPIKISDGNSSLDPDKQLQAEPELIDERSTSDGVTPVSEGVITLASSLIRELENE 130 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 + + ++I + F + E + +++++ +VL + + + Sbjct: 131 VASGALNVDYDEHQVIIRFSEDAT---FMSGDATIKKEMLPIIERVVDVLKNCRGDVVVA 187 Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP- 326 G+TD P + NW LS RA S L+ V DR+ G A + ++ Sbjct: 188 GYTDDRPIASSRYRSNWDLSAARAVSVVHELVLNRDVPADRVIAA-GRAETNPLVPNNSP 246 Query: 327 -MNSANRRIDILVEDR 341 + NRR++I + Sbjct: 247 ENRAVNRRVEIAIRGP 262 >gi|85858041|ref|YP_460243.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB] gi|85721132|gb|ABC76075.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB] Length = 223 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + FD +S+ P + ++ V+ E I + GHTD+ N LS Sbjct: 109 KGDVTFDTNSAEVRPGLYSEINRVAGVMTQYPETLIRVEGHTDSV---GSDAYNMDLSTR 165 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + +L++ GV++ RI ++ G+ +D NRR++I + Sbjct: 166 RANAVKTLLVQRGVADSRI-EVVGYGETMPIATNDTEAGRQKNRRVEIKI 214 >gi|119385600|ref|YP_916655.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans PD1222] gi|119376195|gb|ABL70959.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222] Length = 215 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 10/147 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + L + T + + + + +F S+ + L I Sbjct: 76 LDQQQRSLQQSLNNPNIQIVNHGTHLSVVMPEST---LFATDSAAVGAQGQNDLYTIARN 132 Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L I I GHTD++ A N LS RA S +L GV++ R++ + G Sbjct: 133 LTQYPNSRIQIVGHTDST---GSAAYNQDLSERRARSVAGILTAGGVAQSRVTTL-GRGA 188 Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342 + ++D + NRR++IL+ + Sbjct: 189 TQPVASNDTAAGRAQNRRVEILITPTR 215 >gi|148549426|ref|YP_001269528.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1] gi|148513484|gb|ABQ80344.1| OmpA/MotB domain protein [Pseudomonas putida F1] Length = 263 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 11/220 (5%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + ++ + + D + + + + + + A Sbjct: 39 QSDPQASKVAALETKDAQDWLNKADKAYMDREDEKKVDQLAYLTNQRVEVAKQTIALRTA 98 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K + + + + T G L++ D +FD + + Sbjct: 99 EAELKNASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD----VLFDFNKAELK 154 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + K+ + L + E + G+TD+ A N LS RA S L+++GV Sbjct: 155 SSAYPNITKLAQFLQENPERKVIVEGYTDSV---GSANYNQTLSERRANSVRMALVRAGV 211 Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 RI G+ + + + NRR+++ + + Sbjct: 212 DPARIVS-QGYGKEYPVADNSSNSGRAQNRRVEVTISNDN 250 >gi|325295240|ref|YP_004281754.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065688|gb|ADY73695.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 251 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 10/133 (7%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RG 270 K V + + + D +F +S PE L+++ L+ + + + + G Sbjct: 117 NKPVAVVKEPNRVRVVLKDS---VLFGFNSYQLKPEAKETLRRLARTLSQNPDTVIVISG 173 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MN 328 TD++ N RLS RA S L+ +GV RI + G + ++ Sbjct: 174 FTDST---GSFDYNVRLSEKRAESVKNELVLNGVDPTRIL-VFGCGPKKPIAPNNTPEGR 229 Query: 329 SANRRIDILVEDR 341 + NRR++ILV + Sbjct: 230 ALNRRVEILVYPK 242 >gi|253681414|ref|ZP_04862211.1| chemotaxis protein MotB [Clostridium botulinum D str. 1873] gi|253561126|gb|EES90578.1| chemotaxis protein MotB [Clostridium botulinum D str. 1873] Length = 242 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 8/151 (5%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 S + + + V + GI+I + D +FD + + + +L KI Sbjct: 92 EAMYSKVKEFMDKNKLNNTVQVKRDAKGIIIELKDN---ILFDSAQAEIKTPSKEILDKI 148 Query: 256 GEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKIS 313 +L I I GHTD P N NW LS RA + + ++ G++ D+ Sbjct: 149 SNLLESVPNGIIIEGHTDNVPIHNAKYASNWELSTQRAVNVLKYFVENKGLAPDKFQAA- 207 Query: 314 GFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 G+ +D + NRR++IL+ + Sbjct: 208 GYGEFHPIEKNDNYANKAKNRRVNILITSGE 238 Score = 39.9 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 28/90 (31%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + W YAD +T+L+ FF++++ ++ D I + Sbjct: 3 RRKKAQQSEGGGEEWLQTYADTITLLLTFFVLLYASSSLDTVKFNKISSSLQSVLSGSNS 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 S F+ + + Sbjct: 63 NSILDFNPNGEVPIVGPPQEMGPKSGGGNE 92 >gi|239503512|ref|ZP_04662822.1| OmpA family protein [Acinetobacter baumannii AB900] Length = 471 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 17/225 (7%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 T+Q + + SL +K +++ + +P Sbjct: 259 DTSQTYAAAFTDKDALAGVLGALKGIPNASLEWVGDKITLKAGDAAALEALTAKVKALVP 318 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 ++ + + + L+ + +N+ L + I+ Sbjct: 319 HTEVVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN---------- 368 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS + +L + +L + V + GHTD++ A N LS RA + Sbjct: 369 FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDST---GNAAANKALSQRRAQAV 425 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ GV ++ G + + NRRI+ V Sbjct: 426 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 469 >gi|193076900|gb|ABO11623.2| OmpA/MotB [Acinetobacter baumannii ATCC 17978] Length = 471 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 17/225 (7%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 T+Q + + SL +K +++ + +P Sbjct: 259 DTSQTYAAAFTDKDALAGVLGALKGIPNASLEWVGDKITLKAGDAAALEALTAKVKALVP 318 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 ++ + + + L+ + +N+ L + I+ Sbjct: 319 HTEVVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN---------- 368 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS + +L + +L + V + GHTD++ A N LS RA + Sbjct: 369 FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDST---GNAAANKALSQRRAQAV 425 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ GV ++ G + + NRRI+ V Sbjct: 426 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 469 >gi|114706609|ref|ZP_01439510.1| flagellar motor protein [Fulvimarina pelagi HTCC2506] gi|114538001|gb|EAU41124.1| flagellar motor protein [Fulvimarina pelagi HTCC2506] Length = 344 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 44/345 (12%), Positives = 100/345 (28%), Gaps = 26/345 (7%) Query: 18 KKKVAIDDTPNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFN 70 + + + + + D T+L+A F++ I + + + N Sbjct: 5 RNRRSAGGSAEYWPG----FVDALSTLLLAIMFLLSVFVLAQFILSREISGQDEALDRLN 60 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 L E + ++ + + S + + Sbjct: 61 GQIAELTQLLALERSNAQDSEDEIASLRASLGQLEDERSRLQSALDSGSGSAAAANATIS 120 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + ++ + + ++ + L ++ + + + Sbjct: 121 ALQDNLEEEESISQRARSQVELLNQQLSALRQQIGALESALEASEERDQESQTKIADLGR 180 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPET 248 RL + L+ +D + R I I ++ +F S+ Sbjct: 181 RLNVALAQRVQELNRYRSDFFGRLREILADRENIRIVGDRFVFQSEVLFPSGSADLQTAG 240 Query: 249 IVVLQKIGEVLAH--------STEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQV 298 L ++ + ++ + GHTD P DNW LS+ RA S + Sbjct: 241 TDELDQMASAIRDLAREIPSDINWIVRVDGHTDNVPLSGTGQFDDNWELSVARASSVVKY 300 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 L+ GV + + +GF + NRRI+ + +R Sbjct: 301 LISQGVQAEHL-AATGFGEFQPIEEGSTPEVRRRNRRIEFKLTER 344 >gi|320183885|gb|EFW58714.1| Flagellar motor rotation protein MotB [Shigella flexneri CDC 796-83] Length = 256 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 92/205 (44%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GH DA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHIDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L + +P ++ NRRI+I+V + Sbjct: 196 DQMLLDSKNPQSAGNRRIEIMVLTK 220 >gi|260574860|ref|ZP_05842862.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] gi|259022865|gb|EEW26159.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] Length = 218 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 10/144 (6%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + + + + T +++++ +F S+ P+ L+ + L Sbjct: 81 QQAADLRSQMSNSTMVTNTGNSLVVTMPQD---ILFALDSANLRPDLQADLRAVSNNLLD 137 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + I + GHTD A N LS RA + VL GV RIS G + Sbjct: 138 YPDSTIEVVGHTDD---SGSAAYNQDLSERRARAVAAVLRNGGVPGGRISAY-GRGEDQP 193 Query: 321 KIASDP--MNSANRRIDILVEDRQ 342 ++ + NRR++I++ Sbjct: 194 IASNQTVNGRAQNRRVEIIIHPSN 217 >gi|332162880|ref|YP_004299457.1| flagellar motor protein MotB [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604276|emb|CBY25774.1| flagellar motor rotation protein MotB [Yersinia enterocolitica subsp. palearctica Y11] gi|325667110|gb|ADZ43754.1| Flagellar motor protein MotB [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863328|emb|CBX73451.1| putative protein mbhA [Yersinia enterocolitica W22703] Length = 272 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 103/230 (44%), Gaps = 4/230 (1%) Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + + S ++++ N + S + + + +++ + Sbjct: 20 VGVVSEEERQEIVAQLNGKTIFAQQSFISIPSKSKSGGGKFSDSVDGHEQAKETKSNLAV 79 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P + L + + +++L + I+ S + + E G+ I I D + Sbjct: 80 EVPEPEQSLEELVDRSGREMEELTRIITQITSAY---DAQSNLKMEVVPQGLRILIQDDK 136 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDR 291 + MF +SS++ P +L ++ I I GHTDAS +R+ +NW LS +R Sbjct: 137 HRDMFQRSSAVLTPFFSRLLAELAPAFNEMDNKIIITGHTDASRYRDQVLYNNWNLSGER 196 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 A A++ L+K G+ +DR+ +I+ A L +++P+ + NRRI+I+V + Sbjct: 197 ALMAHKALVKGGLDDDRVLQINAMAEQMLLDSAEPLAAKNRRIEIMVLTK 246 >gi|194364578|ref|YP_002027188.1| OmpA/MotB domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194347382|gb|ACF50505.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3] Length = 362 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 16/160 (10%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L D +++ + + + + I + FD S P+ + Sbjct: 210 ADLDDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVN----FDFDKSNLRPDAV 265 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + E+L + + + GHTD+ + N +LS RA + Y L K+GV R Sbjct: 266 AILSEATEILKRYPDLRVEVAGHTDS---KGTDAYNQKLSERRATAVYNYLTKNGVDAGR 322 Query: 309 ISKISGFAHHRLKIASD--------PMNSANRRIDILVED 340 + G+ R + + NRR ++ V++ Sbjct: 323 LVGPIGYGESRPIAPNTNPDGSDNPEGRAKNRRTELNVQN 362 >gi|146308382|ref|YP_001188847.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp] gi|145576583|gb|ABP86115.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 261 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 74/220 (33%), Gaps = 11/220 (5%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + L+ + E + D + + + + + + + A Sbjct: 39 QSDPQSNKLAALETKEAQEWLNKADKAYMERDDEKKVDQLAYLTNQRVEVAKQTIALRAA 98 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K K + + + T G L++ D +FD + + Sbjct: 99 ENELKNTSAQRAKALLDARDAQIRKLQDSLNAKQTERGTLVTFGD----VLFDFNKAELK 154 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + + ++ L + E + G+TD+ A N LS RA S + L+++GV Sbjct: 155 SSALPNVTQLARFLQENPERQVIVEGYTDSV---GSASYNQGLSERRAESVRRALIRAGV 211 Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 RI G+ + D + NRR+++ + + Sbjct: 212 EPTRIVA-QGYGKEYPVADNSSDSGRAQNRRVEVTISNDN 250 >gi|330876044|gb|EGH10193.1| flagellar motor protein MotD [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 295 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 57 NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + ++ +F ++P + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 TD P NW LS R+ S ++L G++ R++ + G+ + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGINPARLASV-GYGEFQPIAPNTTAAG 232 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 RAKNRRVVLVISR 245 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 3 RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTERT 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 K I + P S + + + ++ + + Q + + L S Q Sbjct: 63 MKPIPIGEQRP--VSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120 >gi|262038680|ref|ZP_06012041.1| outer membrane protein [Leptotrichia goodfellowii F0264] gi|261747295|gb|EEY34773.1| outer membrane protein [Leptotrichia goodfellowii F0264] Length = 147 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 5/132 (3%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 + + ++++ + +FD S P+ +LQ + E + + ++I GHT Sbjct: 19 DEIDITKVKGPKEVTVVLDERSLLFDFDKSNVKPQYYGILQNLKEYIEVNDYDVTIIGHT 78 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330 D+ + N +L + RA S +++ GV RI + +D Sbjct: 79 DS---KGTNEYNMKLGMRRAESVKAKMIEFGVPASRIVGVESRGEEEPVATNDTAEGRAL 135 Query: 331 NRRIDILVEDRQ 342 NRRI+ + + Sbjct: 136 NRRIEFKLVRKN 147 >gi|253582159|ref|ZP_04859382.1| outer membrane protein OmpF [Fusobacterium varium ATCC 27725] gi|251835698|gb|EES64236.1| outer membrane protein OmpF [Fusobacterium varium ATCC 27725] Length = 186 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 11/171 (6%) Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 KE ++ + + + TL ++ N V +++S+ Sbjct: 23 DKQPLKELVIEETENEFIMEDIDVSKKTLEEIIVFNEKG-VTIRREGNNLVLSM---PEL 78 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293 +FD + + L + + L + ++ I G+TD F N LS+ RA Sbjct: 79 VLFDFNKYEVKNKVKGSLNALAKALEENPDIRIKIDGYTD---FIGSEGYNLELSVKRAN 135 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 + L GV I I G+ ++ + + NRR++ ++ + Sbjct: 136 AIKDYLTNRGVKPSNI-SIEGYGKQNPIASNQTETGRAKNRRVEFIISRDK 185 >gi|320158865|ref|YP_004191243.1| outer membrane protein A [Vibrio vulnificus MO6-24/O] gi|319934177|gb|ADV89040.1| outer membrane protein A precursor [Vibrio vulnificus MO6-24/O] Length = 357 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 7/146 (4%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 A+++ + + E + Q N +F SS L + Sbjct: 203 AEEVKQEEPVAEPILLAEEPKPEPKPEWVTKFSNQQYNQELFATGSSKLSAGGKQALTPL 262 Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 EVL + I GHTD++ + N R+S RA + L++ GV +++ +SG Sbjct: 263 AEVLIKYPDAEAEIVGHTDST---GSEKVNQRISEQRAQAVADYLVEQGVKAEQLK-VSG 318 Query: 315 FAHHRLKIASDPM--NSANRRIDILV 338 + ++ + NRR+++ + Sbjct: 319 AGESQPIASNKTAEGRAQNRRVEVTI 344 >gi|146306455|ref|YP_001186920.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp] gi|145574656|gb|ABP84188.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 244 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 7/118 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284 + ++ +F S+ E +L + L S + + GHTD+ N Sbjct: 131 VIVLSDLGNVLFAFDSAELTAEARRLLTDVSARLTGASLVSVKVVGHTDSV---GSDAYN 187 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340 LS RA S L+ GV ++S G + + D + NRR+++ V Sbjct: 188 QGLSERRARSVADFLVAQGVPAGKLST-EGRGESQPVADNGSDAGRAQNRRVELYVSR 244 >gi|307293986|ref|ZP_07573830.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1] gi|306880137|gb|EFN11354.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1] Length = 226 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 63/199 (31%), Gaps = 10/199 (5%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 N+ R K L + + +++ + A + + + Sbjct: 25 DPNTGNRTISKAAIGGIGGALGGYLLGDLVGGRHDRTEKILGAGIGAVAGAGIGAYMDAQ 84 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L GV +++ + + F SS P+ L + VLA Sbjct: 85 EKKLREQTAGSGVDVIRDGDNLVLRM---PSGITFATDSSAVQPQFQPTLNDVASVLAQY 141 Query: 263 T-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I + GHTD+ N LS RA + L GV RI GF + Sbjct: 142 PKTYIDVYGHTDSD---GTDVYNQGLSERRAQAVGDYLTSHGVQSARI-ATRGFGETQPI 197 Query: 322 IASDPMNSA--NRRIDILV 338 ++ NRR++I + Sbjct: 198 ASNATAEGKASNRRVEIKI 216 >gi|184157492|ref|YP_001845831.1| outer membrane protein [Acinetobacter baumannii ACICU] gi|332872459|ref|ZP_08440430.1| OmpA family protein [Acinetobacter baumannii 6014059] gi|183209086|gb|ACC56484.1| Outer membrane protein [Acinetobacter baumannii ACICU] gi|332739345|gb|EGJ70201.1| OmpA family protein [Acinetobacter baumannii 6014059] Length = 471 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 17/225 (7%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 T+Q + + SL +K +++ + +P Sbjct: 259 DTSQTYAAAFTDKDALAGVLGALKGIPDASLEWVGDKITLKAGDAAALEALTAKVKALVP 318 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 ++ + + + L+ + +N+ L + I+ Sbjct: 319 HTEVVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN---------- 368 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS + +L + +L + V + GHTD++ A N LS RA + Sbjct: 369 FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDST---GNAAANKALSQRRAQAV 425 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ GV ++ G + + NRRI+ V Sbjct: 426 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 469 >gi|108757927|ref|YP_633347.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622] gi|108461807|gb|ABF86992.1| OmpA domain protein [Myxococcus xanthus DK 1622] Length = 476 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 70/263 (26%), Gaps = 15/263 (5%) Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 G DE P+ + + + + ++ + ++ + Sbjct: 222 DGFQDEDGCPDLDNDGDGIVDTADKCPNEAGPMQNLGCPIVDKDGDGILDVDDKCPDEPE 281 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + D D + + L Sbjct: 282 DKDGFQ-DEDGCPDLDNDGDGTPDVQDKCPNEAGPTENGGCPDKDTDGDGIVDRLDACPE 340 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI-PLPETIVVLQKIGEVL 259 + + R I I + +F S ++ VL + + L Sbjct: 341 EPGVQEERGCAKQYKMVVIKRDRIEI-----KKQILFSSGSHKIYGKQSTAVLDDVAQAL 395 Query: 260 AHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + I I GHTD+ N RLS RA + L++ G+ RI + GF Sbjct: 396 RDAPWIKRIRIEGHTDSM---GNDASNLRLSQRRADAVMAQLLRRGIDPGRIQAV-GFGE 451 Query: 318 HRLKIASD--PMNSANRRIDILV 338 + + + NRR + V Sbjct: 452 TQPIAPNSTKTGRAMNRRTEFKV 474 >gi|261253627|ref|ZP_05946200.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891] gi|260937018|gb|EEX93007.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891] Length = 320 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 7/115 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285 S + ++ F +S+ PE+ +L ++ + + + + I G+TD+ A N Sbjct: 202 SYATKVDSGNFALNSTELKPESKSLLSELVQFMEQYPQANVEITGYTDS---SGAAEYNQ 258 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 LS RA + L GV RI +SG + ++D + NRR++I V Sbjct: 259 MLSEKRAQAVANELESQGVESSRI-TVSGEGENNPIASNDTRGGRAQNRRVEITV 312 >gi|317047826|ref|YP_004115474.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b] gi|316949443|gb|ADU68918.1| OmpA/MotB domain protein [Pantoea sp. At-9b] Length = 342 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 77/200 (38%), Gaps = 3/200 (1%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 K +LT K++ + + RL L +K+ + Sbjct: 67 KVALTGGQRSSDSDSPIPGGGDDPTKKDGEVKKVVDMDAQKRQLDDIRLNRLREKLDQLI 126 Query: 204 SGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + ++ G+ I IID +N PMF S+ P +L+ I VL Sbjct: 127 EADPRLKALRPHLIINMVEEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNDI 186 Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 IS+ GHTD + NW LS DRA ++ + LM G+ ++ ++ G A Sbjct: 187 PNKISLAGHTDDFQYATGDRGYSNWELSADRANASRRELMMGGLDGSKMLRVVGMADTMK 246 Query: 321 KIASDPMNSANRRIDILVED 340 ++ NRRI +LV + Sbjct: 247 LKNRGGNDAVNRRISLLVLN 266 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 72/180 (40%), Gaps = 1/180 (0%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 N ++IK++ + GSWKI YADFMT +MAFF+VMW+++ + I + Sbjct: 2 KHGNRPIVLIKRRKHKRHEGGH-GSWKIAYADFMTAMMAFFMVMWLLSIANPQQLVQIAE 60 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YF K +T + D +P + + + K + + R Sbjct: 61 YFRTPLKVALTGGQRSSDSDSPIPGGGDDPTKKDGEVKKVVDMDAQKRQLDDIRLNRLRE 120 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + + ++ + + + E+G + + + K + + P ++ + A+ Sbjct: 121 KLDQLIEADPRLKALRPHLIINMVEEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIA 180 >gi|83590576|ref|YP_430585.1| OmpA/MotB [Moorella thermoacetica ATCC 39073] gi|83573490|gb|ABC20042.1| OmpA/MotB [Moorella thermoacetica ATCC 39073] Length = 244 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 8/154 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 +LA S L + V T G++IS + +FD+ + P ++ +L Sbjct: 88 DELAGFSQDLQSYLAEQGLKDQVFVTATDQGLIISFT---GSVLFDRGQATLRPASVPIL 144 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRIS 310 QKI L I + G TD P NW LS+ RA + + + +G+S R Sbjct: 145 QKIAGYLGQVPNYIGVAGSTDDLPINTSQFPTNWELSVIRATTVIRYFTETAGLSPSRFV 204 Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + G+ + ++ NRR+DI++ Sbjct: 205 AL-GYGQYHPLFPNNSEEDRRKNRRVDIIIYKEN 237 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 6/94 (6%) Query: 16 IIKKKVAID------DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 I K+ A + W + YAD +T+LMAFF+VM+ ++ D + + Q Sbjct: 3 IFKRLQAGEENQGSSHAGAGSMRWLLTYADLITLLMAFFIVMYAVSKVDMARYQQLAQAL 62 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103 + + + S D Sbjct: 63 SQIFTSSAGSMVLPELGNGNQVTPPDELAGFSQD 96 >gi|300690749|ref|YP_003751744.1| outer membrane lipoprotein [Ralstonia solanacearum PSI07] gi|299077809|emb|CBJ50447.1| putative outer membrane lipoprotein [Ralstonia solanacearum PSI07] Length = 209 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD S++ P L + E L E ++ GHTD++ N LS Sbjct: 99 PSQVSFDTDSAVIKPSFRGPLDSVAETLTQHPELAANVVGHTDST---GNPNYNMSLSQR 155 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 RA S L GV+ +R++ G + + NRR++I ++ QG Sbjct: 156 RAQSVTSYLTDRGVARNRLTA-EGRGQTQPVGDNATEAGRSQNRRVEIYLKPIQG 209 >gi|192359273|ref|YP_001981784.1| outer membrane protein A [Cellvibrio japonicus Ueda107] gi|190685438|gb|ACE83116.1| outer membrane protein A [Cellvibrio japonicus Ueda107] Length = 344 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 7/120 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 I I + +F+ + S + I +L + +++ GHTD+ + N Sbjct: 225 RIVIDENLGGALFEFNKSEIRNTAAIQ-PVIDVLLEDPSLYVNVIGHTDS---KGSEEYN 280 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RLS RA + L GVS RI + G + + + NRR++ ++ + Q Sbjct: 281 QRLSQTRANVVAKYLNSKGVSLSRIK-VFGMGEDQPVADNSTEEGRAQNRRVEFIISNSQ 339 >gi|237815623|ref|ZP_04594620.1| OmpA family protein [Brucella abortus str. 2308 A] gi|237788921|gb|EEP63132.1| OmpA family protein [Brucella abortus str. 2308 A] Length = 243 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 10/150 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A GV I++++ FD + L + Sbjct: 100 NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 156 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + + + G TD++ A N LS RA S L G+ R + G+ Sbjct: 157 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-SVIGY 212 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343 + +++ + NRR++I + +G Sbjct: 213 GASQPIVSNATPEGRAQNRRVEIQISPLRG 242 >gi|170737030|ref|YP_001778290.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169819218|gb|ACA93800.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3] Length = 340 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 4/208 (1%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + +++L DS+ + + ++ + E + + Sbjct: 86 KMDAMVESALYDDSDMLAGAPLGPNTHALQDTLASHVAVDEAGEVKRGQPMADSREAMDV 145 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 ++ V T G+ + + D +F ++P +L K+G Sbjct: 146 LAERVRKLGKDAGVLDNVQAIVTPMGLRVMLHDTEKRGVFVSGGAVPSEPFRPMLIKLGA 205 Query: 258 VLAHSTEVISIRGHTDASPFRNIA---RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++ + + GHTD+ P+RN R NW LS+DRA SA +++ GV+ +++ ++ G Sbjct: 206 LMGSIGNPLFVMGHTDSVPYRNSDSGSRSNWDLSVDRAMSARSWVLQGGVNSEQVMQVIG 265 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 A + ++P + NRRI+ LV + Sbjct: 266 MADRAPLV-NNPRAAINRRIEFLVLTPE 292 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 47/134 (35%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 I+K+ + D ++ G WK+ +ADF L+ F+++W ++A D++T++ ++ + Sbjct: 38 IVKRPLRRDYDDDHDGGWKVAFADFCLALLCVFMLLWALSARDEETRRKMDAMVESALYD 97 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 G N +++DE S + + Sbjct: 98 DSDMLAGAPLGPNTHALQDTLASHVAVDEAGEVKRGQPMADSREAMDVLAERVRKLGKDA 157 Query: 136 NSQQSEHCKNSLTR 149 + + Sbjct: 158 GVLDNVQAIVTPMG 171 >gi|254227754|ref|ZP_04921185.1| outer membrane protein OmpA [Vibrio sp. Ex25] gi|262395797|ref|YP_003287650.1| outer membrane protein A precursor [Vibrio sp. Ex25] gi|151939796|gb|EDN58623.1| outer membrane protein OmpA [Vibrio sp. Ex25] gi|262339391|gb|ACY53185.1| outer membrane protein A precursor [Vibrio sp. Ex25] Length = 330 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 ++ T F+ S+ L L + + I G+TD+ A N +LS Sbjct: 211 EEYGTGTFEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDS---SGPATYNQKLS 267 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S L +G+ DR+ + G + NRR++++V Sbjct: 268 ERRAQSVADYLTAAGIDSDRL-TVKGMGEENPVADNSTREGREKNRRVEVVV 318 >gi|300855151|ref|YP_003780135.1| putative flagellar motor protein MotB [Clostridium ljungdahlii DSM 13528] gi|300435266|gb|ADK15033.1| predicted flagellar motor protein MotB [Clostridium ljungdahlii DSM 13528] Length = 249 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 80/205 (39%), Gaps = 8/205 (3%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + K + + + + + S +K K + + Sbjct: 41 DQEKLAKISQQFNVIFSGEKSIQNNGGSSTNQFIETGESTDKPDESAGKTEQDTMNEIKK 100 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + + D V E ++ G+ ISI + +F+ + L +L I E++ Sbjct: 101 TLDAKIKQDGYDDKVKVEISKDGLGISIQEA---ILFNSGDAEVLTHIHPLLISISEMIR 157 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHH 318 + I I GHTD P N R NW LS RA + ++K+ G++ ++ I ++ + Sbjct: 158 NLDNNIRIAGHTDNVPIHNSKFRSNWDLSAMRAINVMNFMVKNGGINITKV-SIQAYSEY 216 Query: 319 RLKIASDP--MNSANRRIDILVEDR 341 + K + + NRR++I + + Sbjct: 217 QPKSTNLTKEGRAQNRRVEIFIVRK 241 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 44/129 (34%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W I YAD +T+L+A F+VM+ I+ D + I Q FN + Sbjct: 3 KKRQHHEEHVDETWLIPYADMLTLLLALFIVMFAISKVDQEKLAKISQQFNVIFSGEKSI 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 N + ++ T+ +I T K Q ++ + S+ Sbjct: 63 QNNGGSSTNQFIETGESTDKPDESAGKTEQDTMNEIKKTLDAKIKQDGYDDKVKVEISKD 122 Query: 140 SEHCKNSLT 148 Sbjct: 123 GLGISIQEA 131 >gi|224824498|ref|ZP_03697605.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002] gi|224602991|gb|EEG09167.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002] Length = 218 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 56/148 (37%), Gaps = 10/148 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L V + I +++ D F +S+ P L + Sbjct: 76 AYMDYQEKQLRDKLANTQVGVDRVGDQIKLTMPDNIT---FAVNSAELQPSVRTALTDVS 132 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + ++ GHTD + N LS RA S L GV+ RI+ + G+ Sbjct: 133 NVLTQYPDTTITVAGHTDNT---GNVAYNQTLSQRRAQSVAGFLQSRGVAGSRINPV-GY 188 Query: 316 AHHRLKIASDPM--NSANRRIDILVEDR 341 ++ ++ + NRR++IL+ + Sbjct: 189 GQNQPIASNTTAEGRAKNRRVEILINPK 216 >gi|158422120|ref|YP_001523412.1| flagellar motor protein [Azorhizobium caulinodans ORS 571] gi|158329009|dbj|BAF86494.1| flagellar motor protein [Azorhizobium caulinodans ORS 571] Length = 339 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 84/271 (30%), Gaps = 14/271 (5%) Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 + + S+ + + LK + Q + Sbjct: 70 LERATGQSQDSELAALRASLQATEAERDRLKAAAGPAPTGPDPSREAALAREVDMQKDVA 129 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 +L + + + ++ + N + + KRL + L Sbjct: 130 SRALAQIELLNQQIAALRRQMAALEEALNVSEKRDQESQTKIADLGKRLNVALAQRVQEL 189 Query: 204 SGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-- 259 S ++ + R I I ++ FD+ S+ P PE + L K+ + Sbjct: 190 SRFRSEFFGRLRDILGNRPDIRIVGDRFVFQSEVFFDRGSATPRPEALAELDKLASAILE 249 Query: 260 ------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + I GHTD+ P NW LS RA + Q L+ GV + Sbjct: 250 LERQIPPDINWALRIDGHTDSRPISTPQFPSNWELSAARAIAVAQYLISKGVQPRHLIAA 309 Query: 313 SGFAHHRLKIASDPMN--SANRRIDILVEDR 341 GF ++ + NRRI++ + +R Sbjct: 310 -GFGEYQPIDTGTSDESMARNRRIELKLTER 339 >gi|300703368|ref|YP_003744970.1| outer membrane lipoprotein [Ralstonia solanacearum CFBP2957] gi|299071031|emb|CBJ42340.1| putative outer membrane lipoprotein [Ralstonia solanacearum CFBP2957] Length = 209 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD S++ P L + E L E S+ GHTD++ N LS Sbjct: 99 PSQVSFDTDSAMIKPSFRGPLDSVAETLTQHPELAASVVGHTDST---GNPNYNMSLSQR 155 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 RA S L GV+ R++ G + + + NRR++I ++ QG Sbjct: 156 RAQSVTSYLTDRGVARTRLTA-EGRGQTQPVGDNATEAGRAQNRRVEIYLKPIQG 209 >gi|17987069|ref|NP_539703.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M] gi|261222366|ref|ZP_05936647.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94] gi|261325291|ref|ZP_05964488.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33] gi|265988867|ref|ZP_06101424.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis M292/94/1] gi|265991281|ref|ZP_06103838.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265995118|ref|ZP_06107675.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|265998331|ref|ZP_06110888.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1] gi|265999432|ref|ZP_05466341.2| bacterial outer membrane protein [Brucella melitensis bv. 2 str. 63/9] gi|17982726|gb|AAL51967.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M] gi|260920950|gb|EEX87603.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94] gi|261301271|gb|EEY04768.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33] gi|262552799|gb|EEZ08789.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1] gi|262766231|gb|EEZ12020.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263002065|gb|EEZ14640.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|263093937|gb|EEZ17871.1| bacterial outer membrane protein [Brucella melitensis bv. 2 str. 63/9] gi|264661064|gb|EEZ31325.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis M292/94/1] gi|326409224|gb|ADZ66289.1| OmpA/MotB domain-containing protein [Brucella melitensis M28] gi|326538933|gb|ADZ87148.1| OmpA/MotB domain protein [Brucella melitensis M5-90] Length = 232 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 10/150 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A GV I++++ FD + L + Sbjct: 89 NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 145 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + + + G TD++ A N LS RA S L G+ R + G+ Sbjct: 146 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-AVIGY 201 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR++I + +G Sbjct: 202 GASQPIASNATPEGRAQNRRVEIQISPLRG 231 >gi|26988234|ref|NP_743659.1| OmpA/MotB domain protein [Pseudomonas putida KT2440] gi|24982975|gb|AAN67123.1|AE016341_6 OmpA family protein [Pseudomonas putida KT2440] Length = 263 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 11/220 (5%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + ++ + + D + + + + + + A Sbjct: 39 QSDPQASKVAALETKDAQDWLNKADKAYMDREDEKKVDQLAYLTNQRVEVAKQTIALRTA 98 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K + + + + T G L++ D +FD + + Sbjct: 99 EAELKNASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD----VLFDFNKAELK 154 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + K+ + L + E + G+TD+ A N LS RA S L+++GV Sbjct: 155 SNAYPNITKLAQFLQENPERKVIVEGYTDSV---GSANYNQTLSERRANSVRMALVRAGV 211 Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 RI G+ + + + NRR+++ + + Sbjct: 212 DPARIVS-QGYGKEYPVADNSSNSGRAQNRRVEVTISNDN 250 >gi|262404553|ref|ZP_06081108.1| outer membrane protein A precursor [Vibrio sp. RC586] gi|262349585|gb|EEY98723.1| outer membrane protein A precursor [Vibrio sp. RC586] Length = 321 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +S+ P L K+ L + + + GHTD++ N +LS R Sbjct: 208 DSGTFANNSAQLKPAMESKLDKLVGYLKQYPQATVEVVGHTDST---GSDAYNQKLSEKR 264 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + + L G+ RI+ G ++ NRR+++++ Sbjct: 265 AQAVAKALEAQGIEASRITA-KGQGESNPIASNATAEGREKNRRVELVI 312 >gi|261378300|ref|ZP_05982873.1| OmpA family protein [Neisseria cinerea ATCC 14685] gi|269145394|gb|EEZ71812.1| OmpA family protein [Neisseria cinerea ATCC 14685] Length = 225 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L V + I + + + F S++ L + Sbjct: 76 YMDYQEQRLRQSLAGTQVQVQRQGNQIKLVMPENVT---FATGSAVLSDNAQFALNTAAQ 132 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +I GHTD + N LS RA + L GV+ R+ + G+ Sbjct: 133 TLVQYPDTTLTINGHTDNT---GSDAVNNPLSQHRAQTVAYYLQSRGVAASRL-AVYGYG 188 Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342 H ++ + NRR++IL+ Q Sbjct: 189 SHMPVASNATAEGRAQNRRVEILINPDQ 216 >gi|163781627|ref|ZP_02176627.1| flagellar motor protein MotB [Hydrogenivirga sp. 128-5-R1-1] gi|159882847|gb|EDP76351.1| flagellar motor protein MotB [Hydrogenivirga sp. 128-5-R1-1] Length = 235 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 9/155 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 R K+ +L K+I+ L++ I L T + ++ ++ S P P+ Sbjct: 84 RVKKFAELKKEITKIKEELLSMGIEADYLVTGTCMKLRVN-----TNRLYPLGSEEPYPQ 138 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE 306 + + L + I+ G+TD P N NW LS RA S ++ + G + Sbjct: 139 AKELFLNMCSRLKPFSLPITFEGYTDNMPISNPRFPSNWELSAMRAVSVLRLFITCGYPQ 198 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 + +S + G+ H +D NRRI+ ++ Sbjct: 199 ELLSAV-GYGEHHPIAPNDTPANRERNRRIEFCIK 232 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK-KAIEQYFNPFGKNLMTA 79 ++ +W + D M++L+ FF++++ ++ + + ++ FG + Sbjct: 4 KKKEEECPKAPAWLTSFGDLMSLLLTFFILLYSMSIISLEKFYQVLKGLIEAFGGKQVIF 63 Query: 80 SKGIFDEQNPPE 91 S+G + + Sbjct: 64 SEGGALKASRIP 75 >gi|283853398|ref|ZP_06370644.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B] gi|283571211|gb|EFC19225.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B] Length = 301 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 103/329 (31%), Gaps = 46/329 (13%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K +D W I AD MT+L+ FFL++ ++ D + + Sbjct: 8 RKRRPEDDD----LWPISMADMMTLLLCFFLLLVAVSHVDLGRYERVADSMQKAMIPDKP 63 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 ASK E P + ++ ++ + + Sbjct: 64 ASKPKAPEPQPAPPKAPAPQAAPKSPPPPPEPASVRSKVSHTTLASDPVPPLEPEKPKPE 123 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + + T KK L+D+ K+ Sbjct: 124 AKPAEPAPPQAAAVPAGPEAERTGP------------------------TKKSLEDIRKE 159 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 ++ L D V G+ +++ +S+ + +L+ I Sbjct: 160 LAGKL-----DITSGAVEILPRENGVELNLRGAAFFD---AASADIKSGGLPLLRDIAAT 211 Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L+ + +++ GHTD P + NW LS RA ++L+ GV + ++ G A Sbjct: 212 LSGTPYRVTVEGHTDNRPIESWLYPSNWELSSARASRVARLLIDGGVPAGHM-RVEGLAD 270 Query: 318 HRLKIASDPMN--------SANRRIDILV 338 + + + NRR+ ILV Sbjct: 271 TQPVAPNTDPAGRSIAENQARNRRVVILV 299 >gi|253774745|ref|YP_003037576.1| hypothetical protein ECBD_3391 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|300929521|ref|ZP_07144987.1| OmpA family protein [Escherichia coli MS 187-1] gi|253325789|gb|ACT30391.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|300462520|gb|EFK26013.1| OmpA family protein [Escherichia coli MS 187-1] Length = 211 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 87/172 (50%) Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 E + A+ +KK +L + +S + ++ + E G+ + I Sbjct: 4 PEETEKKARDVNEKTALLKKKSATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIK 63 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 D +N MF++ S+ +P +L ++ V I I GHTDA ++N DNW LS Sbjct: 64 DDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYDNWNLSG 123 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 DRA SA +VL ++G+ ED++ ++S A L + +P ++ NRRI+I+V + Sbjct: 124 DRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 175 >gi|157370029|ref|YP_001478018.1| OmpA/MotB domain-containing protein [Serratia proteamaculans 568] gi|157321793|gb|ABV40890.1| OmpA/MotB domain protein [Serratia proteamaculans 568] Length = 569 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 51/185 (27%), Gaps = 9/185 (4%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 D ++ A L L + D I V Sbjct: 359 PIDDYGPKTDAVAVLREDAAQLDDQARNGVPTRMSLGLYQGERLRMPLLDAIRSYVPPPL 418 Query: 220 TRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDAS 275 I+ + +FD + +L + I + GHTD + Sbjct: 419 PSKPQPKPAPKIVRLDSMSLFDSGKYALKAGSTKMLINSLVGIKAKPGWLIVVAGHTDNT 478 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333 N LS RA + + +G + + G+ R +D + NRR Sbjct: 479 ---GNPALNQTLSQKRAAAVRDWMRDTGDVPESCFAVQGYGESRPVATNDTPEGRALNRR 535 Query: 334 IDILV 338 ++I + Sbjct: 536 VEISL 540 >gi|28869189|ref|NP_791808.1| motB protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28852429|gb|AAO55503.1| motB protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 295 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 57 NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + ++ +F ++P + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 TD P NW LS R+ S ++L G++ R++ + G+ + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGINPARLASV-GYGEFQPIAPNTTAAG 232 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 RAKNRRVVLVISR 245 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 3 RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTERT 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 K I + P S + + + ++ + + Q + + L S Q Sbjct: 63 MKPIPIGEQRP--VSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120 >gi|227112504|ref|ZP_03826160.1| flagellar motor protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227326903|ref|ZP_03830927.1| flagellar motor protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 351 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 4/203 (1%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 K +LT S+ +++ + + + + RL L +++ + Sbjct: 65 KVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLDQLI 124 Query: 204 SGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + +L E G+ I IID +N PMF S+ P +L+ I +L Sbjct: 125 EADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIAPILNDF 184 Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR- 319 +SI GHTD + NW LS DRA ++ + L+ G+S+ ++ ++ G A Sbjct: 185 PNKLSISGHTDDVQYTTGERGYSNWELSADRANASRRELIFGGLSDGKVLRVVGMAATMS 244 Query: 320 LKIASDPMNSANRRIDILVEDRQ 342 LK A+ ++ NRRI +LV RQ Sbjct: 245 LKQATGGNDAINRRISLLVLSRQ 267 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 Q II+KK ++ GSWKI YADFMT +MA FLVMW+I + I +YF Sbjct: 2 KHQHPIIRKKRKSGHGGHHGGSWKIAYADFMTAMMALFLVMWLIAISTPMQLAQIAEYFR 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 K +T+ D +P + + + +++ + R + Sbjct: 62 TPLKVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLD 121 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 ++ + + L ++G + + + K + + P ++ + A+ Sbjct: 122 QLIEADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIA 178 >gi|114321225|ref|YP_742908.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227619|gb|ABI57418.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 251 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 71/202 (35%), Gaps = 14/202 (6%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 ++ + E G ++ + + P S + ++ D A Sbjct: 59 EDHAGVPEQEPGLFAGQAGVPSVLEGEFGPLYALPESPAPVADPATEEDPVDQAM----- 113 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 D + + I I D+ +F + + + VL ++ VL S Sbjct: 114 --ADELDALGDDIDVLVEAGSISFRISDE---ILFPSGEAELTDQGLQVLGQLIPVLEVS 168 Query: 263 TEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I++ GHTD P NW LS RA + L G++ R+ +G A R Sbjct: 169 DHRITVEGHTDNVPIATERFPSNWELSTGRATRVLRFLEAEGIASTRLQA-TGLADTRPI 227 Query: 322 IASDPM--NSANRRIDILVEDR 341 + + NRR++++++ Sbjct: 228 AGNATAEGRAQNRRVELVLQTP 249 Score = 41.9 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 24/86 (27%), Gaps = 4/86 (4%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINA----TDDDTKKAIEQYFNPFGKNLMT 78 SW +VY D MT+L+ F+VM + Sbjct: 26 EPAEDTEGESWLLVYLDVMTLLLVMFVVMLAFTEDHAGVPEQEPGLFAGQAGVPSVLEGE 85 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDE 104 ++P + + +D+ Sbjct: 86 FGPLYALPESPAPVADPATEEDPVDQ 111 >gi|302343053|ref|YP_003807582.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075] gi|301639666|gb|ADK84988.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075] Length = 247 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 7/153 (4%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + + + + + + V G+ + + + F+ + E Sbjct: 88 EARAAMESRQMSEQVQNFVNETGLGSEVNVNAGNKGVRLRV---KGHLFFEPGGAEIRQE 144 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ I +V +++ GHTD P NW LS RA + + L GV E Sbjct: 145 AKKLLEGIAKVTKKFDFYLTVEGHTDDQPISTPRFPSNWELSAARAAAVLRYLAGDGVPE 204 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 R+S I G+A A+ NRR++ + Sbjct: 205 KRMSAI-GYASSFPIAANTSEAGRNKNRRVEFV 236 >gi|299134013|ref|ZP_07027206.1| OmpA/MotB domain protein [Afipia sp. 1NLS2] gi|298590760|gb|EFI50962.1| OmpA/MotB domain protein [Afipia sp. 1NLS2] Length = 464 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 87/276 (31%), Gaps = 9/276 (3%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 + KNL + P Q D V +R Sbjct: 195 EAIAAALKNLPEGYTVEKNALYAPPYLFQVNKDPVATTLALSGYVPDNNAHAAIVSAIER 254 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + S + ++ N L + Sbjct: 255 KFVGVKIEDKLKASAGAPQGFLAATMTALSALSRLSTGTLTIQDRNVTLSGDALYPGANA 314 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + + L + + L + V + + + + T F+ ++ P Sbjct: 315 RISEELAAKLPQGWKQKAELTVKPVAAPVNATICQQLLTGLL--AKGTIQFETGKAVIDP 372 Query: 247 ETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 ++ +L ++ E VL T I I GHTD+ N LS+ RA + +K+GV Sbjct: 373 DSAGLLDRLIEAVLRCPTSQIEIEGHTDS---NGEKEANLALSMRRAQAVADYFIKAGVP 429 Query: 306 EDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 ++RIS + GF R ++D + NRRI+ +V Sbjct: 430 KERISAV-GFGSERPVASNDTEEGKAQNRRIEFVVR 464 >gi|262041860|ref|ZP_06015044.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040765|gb|EEW41852.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 565 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 9/151 (5%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L + + ++ + V+ + + I + + +FD S P + +L Sbjct: 397 LIPFVEAAINDWAPPPPPRPVIKQVVQGPQTIRL---DSMALFDTGKSALKPGSTKLLVN 453 Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + I + GHTD+ R N +LSL RA + + +G + + Sbjct: 454 SLLGIKVKPGWLIVVAGHTDSI---GNDRSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQ 510 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G+ R +++ + NRR++I + ++ Sbjct: 511 GYGASRPVASNETPEGRAQNRRVEISLVPQK 541 >gi|294504689|ref|YP_003568751.1| putative OmpA family protein [Yersinia pestis Z176003] gi|262362751|gb|ACY59472.1| putative OmpA family protein [Yersinia pestis D106004] gi|294355148|gb|ADE65489.1| putative OmpA family protein [Yersinia pestis Z176003] Length = 186 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290 + MF S PE I V++++ + + I I GHTD+ P + +N LS Sbjct: 76 KGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEK 135 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 RA + + + ++G+ D+I + G + ++D S NRR++I V Sbjct: 136 RAANVARYMEQAGIPTDKI-RFEGKGETQPVSSNDDATGRSQNRRVEIFV 184 >gi|153949967|ref|YP_001400351.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP 31758] gi|152961462|gb|ABS48923.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758] Length = 458 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290 + MF S PE I V++++ + + I I GHTD+ P + +N LS Sbjct: 348 KGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEK 407 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 RA + + + ++G+ D+I + G + ++D S NRR++I V Sbjct: 408 RAANVARYMEQAGIPTDKI-RFEGKGETQPVSSNDDATGRSQNRRVEIFV 456 >gi|330807883|ref|YP_004352345.1| hypothetical protein PSEBR_a1163 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375991|gb|AEA67341.1| Conserved hypothetical protein; putative outer membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 231 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ + + P VL + L ST + + GHTD+ N RLS RA S Sbjct: 127 FEFNKATLTPADKDVLSGVATRLKQETSTTQLRVTGHTDSV---GSDAYNQRLSEKRANS 183 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 Q L+ +GV +SG + + + NRR +I + Sbjct: 184 VVQYLVDNGVPRASFVSVSGAGESQPVADNKTADGRAMNRRTEIKINR 231 >gi|298504468|gb|ADI83191.1| OmpA family outer membrane protein [Geobacter sulfurreducens KN400] Length = 429 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD ++ P+ ++K + L + ++ GHTD+ N +LS RA + Sbjct: 321 FDTDKAVVKPQYNDEIKKAADFLKEYPDATAVIEGHTDSV---GSDAYNQKLSERRAKAV 377 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + L+ G+S R+S GF + + NRR+ +++ Sbjct: 378 MKYLVDKFGISAKRLSA-KGFGESKPIADNATEEGRYKNRRVVAVID 423 >gi|39995468|ref|NP_951419.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA] gi|39982231|gb|AAR33692.1| OmpA domain protein [Geobacter sulfurreducens PCA] Length = 429 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD ++ P+ ++K + L + ++ GHTD+ N +LS RA + Sbjct: 321 FDTDKAVVKPQYNDEIKKAADFLKEYPDATAVIEGHTDSV---GSDAYNQKLSERRAKAV 377 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + L+ G+S R+S GF + + NRR+ +++ Sbjct: 378 MKYLVDKFGISAKRLSA-KGFGESKPIADNATEEGRYKNRRVVAVID 423 >gi|51596980|ref|YP_071171.1| OmpA/MotB family protein [Yersinia pseudotuberculosis IP 32953] gi|170023725|ref|YP_001720230.1| type VI secretion system OmpA/MotB family protein [Yersinia pseudotuberculosis YPIII] gi|186896063|ref|YP_001873175.1| type VI secretion system OmpA/MotB family protein [Yersinia pseudotuberculosis PB1/+] gi|51590262|emb|CAH21899.1| possible OmpA/MotB family protein [Yersinia pseudotuberculosis IP 32953] gi|169750259|gb|ACA67777.1| type VI secretion system OmpA/MotB family protein [Yersinia pseudotuberculosis YPIII] gi|186699089|gb|ACC89718.1| type VI secretion system OmpA/MotB family protein [Yersinia pseudotuberculosis PB1/+] Length = 458 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290 + MF S PE I V++++ + + I I GHTD+ P + +N LS Sbjct: 348 KGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPINKPGFPNNQVLSEK 407 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 RA + + + ++G+ D+I + G + ++D S NRR++I V Sbjct: 408 RAANVARYMEQAGIPTDKI-RFEGKGETQPVSSNDDATGRSQNRRVEIFV 456 >gi|260460699|ref|ZP_05808949.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075] gi|259033276|gb|EEW34537.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075] Length = 216 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 10/143 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + L GV + I++++ F+ P VL + V Sbjct: 77 MDQNEAELRRQLEGTGVSVTRSGDQIILNMPSDIT---FNSDQDAVKPGFYQVLNSVALV 133 Query: 259 LAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + GHTD++ + N+ LS RA + L GV + R ++GF Sbjct: 134 LKKFKQTTVDVFGHTDST---GGDQHNFDLSQRRALAVANYLAGQGVDQRRF-AVTGFGK 189 Query: 318 HRLKIASDP--MNSANRRIDILV 338 R ++ + NRR++I + Sbjct: 190 TRPVASNATSEGRAQNRRVEIQL 212 >gi|15964027|ref|NP_384380.1| hypothetical protein SMc00354 [Sinorhizobium meliloti 1021] gi|15073203|emb|CAC41711.1| Probable porin [Sinorhizobium meliloti 1021] Length = 221 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 62/169 (36%), Gaps = 11/169 (6%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + A + + S L A GV I++++ F Sbjct: 60 DAALVGAGIGALGGGLVGNYMDQQESELRAQLQGTGVSVTRAGDRIILNMPSNIT---FA 116 Query: 239 KSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 +P L + VL + +I + GHTD++ A N LS RA S Sbjct: 117 TDRDQVIPAFYSTLDSVAIVLRKFNKTLIDVDGHTDST---GSASYNQGLSERRAASVAN 173 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED-RQG 343 L GV + R+S + G+ R ++ + NRR++I + +QG Sbjct: 174 YLASRGVDQRRMSAV-GYGLERPIASNATEVGRAQNRRVEISIAPIKQG 221 >gi|51597618|ref|YP_071809.1| hypothetical protein YPTB3318 [Yersinia pseudotuberculosis IP 32953] gi|51590900|emb|CAH22556.1| Putative chemotaxis membrane protein [Yersinia pseudotuberculosis IP 32953] Length = 264 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 4/230 (1%) Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + + S ++++ N + S + + + + +++ + Sbjct: 11 VGVVSEEERQEIVAQLNGKTIFAQQSFISIPSKSKSGGGKLSNSIDGNEQAKETKSNLAI 70 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P + + K + +++L++ I S N + E G+ I I D + Sbjct: 71 EVPEPEKSLEEVVDKSRHEMEELSRIIMQITSAY---NAQSNLQMEVVPQGLRILIQDDQ 127 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDR 291 MF +SS++ P +L ++ I I GHTDAS +R+ +NW LS +R Sbjct: 128 QRDMFQRSSAVLTPFFSRLLGELAPAFNEMDNKIIITGHTDASRYRDQLLYNNWNLSGER 187 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 A A++ L+ G+ E R+ +I+ A L +DP+ + NRRI+I+V + Sbjct: 188 ALMAHKALVNGGLDEGRVLQINTMADQMLLDPTDPLAAKNRRIEIMVLTK 237 >gi|258621036|ref|ZP_05716070.1| outer membrane protein OmpA [Vibrio mimicus VM573] gi|262166295|ref|ZP_06034032.1| outer membrane protein A precursor [Vibrio mimicus VM223] gi|258586424|gb|EEW11139.1| outer membrane protein OmpA [Vibrio mimicus VM573] gi|262026011|gb|EEY44679.1| outer membrane protein A precursor [Vibrio mimicus VM223] Length = 322 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +S+ P L K+ L + + + GHTD+ N +LS R Sbjct: 209 DSGTFANNSAELKPSMETKLDKLVGYLNQYPQAKVEVVGHTDS---NGSEAYNQKLSEKR 265 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + + L GV RI+ G ++ NRR+++++ Sbjct: 266 AQAVAKALEAQGVDAARITA-KGQGESNPIASNATAEGREKNRRVELVI 313 >gi|319787865|ref|YP_004147340.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1] gi|317466377|gb|ADV28109.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1] Length = 369 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 88/288 (30%), Gaps = 25/288 (8%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 + +NP+ + A + P S + D +V K+G+ Q Sbjct: 98 FIQAGRSWNPYLLFGIGAQFSEEEYVVPAPNSPFERAD---------GNVAAKVGAGLQT 148 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 R+ + + N ++ + I P + Sbjct: 149 TFDSRVAVRAELAYRADFDDQSINPARAGRDEDYFGDLLASIGVVIPLGPAAVAAPPAPA 208 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 L D +++ + + + + I + FD Sbjct: 209 PTPVAPSCADLDDDGDGVNNCDDKCPGSQAGQAIGPDGCPVPVSIDL----KGVNFDYDK 264 Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + P+ + +L + E+L + + + GHTD+ N +LS RA + Y L Sbjct: 265 ATLRPDAVAILSEAAEILKRYPDLRVEVAGHTDSR---GTDAYNQKLSERRAKAVYDYLT 321 Query: 301 KSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVED 340 +G+ R+ G+ R + + NRR ++ V++ Sbjct: 322 SNGIDASRLVGPIGYGESRPIAPNANPDGSDNPEGRAKNRRTELNVQN 369 >gi|289627957|ref|ZP_06460911.1| flagellar motor protein MotD [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647094|ref|ZP_06478437.1| flagellar motor protein MotD [Pseudomonas syringae pv. aesculi str. 2250] gi|298487807|ref|ZP_07005848.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157899|gb|EFH98978.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866472|gb|EGH01181.1| flagellar motor protein MotD [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 295 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 66/193 (34%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 57 NDTERTMKPIPIGEQRPVSIKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + ++ +F +IP + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 TD P NW LS R+ S ++L GV+ R++ + G+ + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIAPNTTAAG 232 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 RAKNRRVVLVISR 245 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 4/124 (3%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +++ A + + W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 1 MARRRQAEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 K I + P S + + + ++ + + Q + + L Sbjct: 59 TERTMKPIPIGEQRP--VSIKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 136 NSQQ 139 S Q Sbjct: 117 KSDQ 120 >gi|326795346|ref|YP_004313166.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] gi|326546110|gb|ADZ91330.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] Length = 254 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 88/216 (40%), Gaps = 12/216 (5%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + LS+ Q + + + +LTR + + ++ + + SKE I ++R Sbjct: 44 VSALSSIQIALNSEGALTRLNPTQYSGGGTEIIKPADPQLATNDDLTYSKEPIDDVER-- 101 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + + + T + A+N+ + I I + +F+ + L Sbjct: 102 --EHVKEIANDTANKFAAENLDSQIAVFEDGEKITIRV---DGASLFESGEADVLWSAEP 156 Query: 251 VLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDR 308 + + + + + I+GHTD P NW LS RA + + ++ G+ +R Sbjct: 157 IFEALYRIFVTYPDYNISIKGHTDNIPINTTRFPSNWELSAIRATTTLRYFLEKGIPPER 216 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 ++ +G+A + +D + NRR + +++ + Sbjct: 217 MTA-TGYADVIPLVPNDTPEHRAQNRRAEFVLQRNK 251 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 6/156 (3%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 + G W + YAD M++L+ FF++++ ++ + T + S+G Sbjct: 7 EEEEVAG-WIVTYADLMSLLLVFFILLYSLSKLTESTLVSALSSIQIALN-----SEGAL 60 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 NP + S + + + DL + I + ++ + Sbjct: 61 TRLNPTQYSGGGTEIIKPADPQLATNDDLTYSKEPIDDVEREHVKEIANDTANKFAAENL 120 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 +S E G+ + D E L Sbjct: 121 DSQIAVFEDGEKITIRVDGASLFESGEADVLWSAEP 156 >gi|315287740|gb|EFU47143.1| OmpA family protein [Escherichia coli MS 110-3] Length = 211 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 3/175 (1%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + E K +L K L +LA I++ + + E G+ + Sbjct: 4 PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 I D +N MF++ S+ +P +L ++ VL I I GHTDA ++N +NW Sbjct: 61 LIKDDQNRNMFERGSAKIMPFFKTLLVELAPVLDSLDNKIIITGHTDAMAYKNNIYNNWN 120 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 LS DRA SA +VL ++G+ E+++ ++S A L A +P ++ NRRI+I+V + Sbjct: 121 LSGDRALSARRVLEEAGMPENKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 175 >gi|298369093|ref|ZP_06980411.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314] gi|298283096|gb|EFI24583.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314] Length = 417 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 56/136 (41%), Gaps = 6/136 (4%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + K V + ++I+ +F+ S+ + VL +G+ L Sbjct: 257 LENEIARKLVSVKDDPDRSTVTIL---GDGLFESGSTSIQDQYYPVLAAVGQALNSVDGQ 313 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + + G+TD +P +++ NW LS RA + ++L+ + + G + Sbjct: 314 VVVTGYTDNTPIQSLEYPSNWHLSQGRADAVKEILLSYMRNGANRIRSEGRGSTNPVAPN 373 Query: 325 DPMN--SANRRIDILV 338 D + NRR++I + Sbjct: 374 DSPENKAKNRRVEITL 389 >gi|71737581|ref|YP_275515.1| flagellar motor protein MotD [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558134|gb|AAZ37345.1| chemotaxis protein MotB [Pseudomonas syringae pv. phaseolicola 1448A] gi|283133060|dbj|BAI63827.1| flagellar motor protein MotD [Pseudomonas syringae pv. tabaci] gi|320325140|gb|EFW81209.1| flagellar motor protein MotD [Pseudomonas syringae pv. glycinea str. B076] gi|320329399|gb|EFW85392.1| flagellar motor protein MotD [Pseudomonas syringae pv. glycinea str. race 4] gi|330889033|gb|EGH21694.1| flagellar motor protein MotD [Pseudomonas syringae pv. mori str. 301020] gi|330986516|gb|EGH84619.1| flagellar motor protein MotD [Pseudomonas syringae pv. lachrymans str. M301315] Length = 295 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 66/193 (34%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 57 NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + ++ +F +IP + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 TD P NW LS R+ S ++L GV+ R++ + G+ + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIAPNTTAAG 232 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 RAKNRRVVLVISR 245 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 4/124 (3%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +++ A + + W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 1 MARRRQAEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 K I + P S + + + ++ + + Q + + L Sbjct: 59 TERTMKPIPIGEQRP--VSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 136 NSQQ 139 S Q Sbjct: 117 KSDQ 120 >gi|253688988|ref|YP_003018178.1| OmpA/MotB domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755566|gb|ACT13642.1| OmpA/MotB domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 350 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 4/203 (1%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 K +LT S+ +++ + + + + RL L +++ + Sbjct: 65 KVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLDQLI 124 Query: 204 SGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + +L E G+ I IID +N PMF S+ P +L+ I +L Sbjct: 125 EADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIAPILNDF 184 Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-R 319 +SI GHTD + NW LS DRA ++ + L+ G+S+ ++ ++ G A Sbjct: 185 PNKLSISGHTDDVQYTTGERGYSNWELSADRANASRRELIFGGLSDGKVLRVVGMAATMN 244 Query: 320 LKIASDPMNSANRRIDILVEDRQ 342 LK A+ ++ NRRI +LV RQ Sbjct: 245 LKQATGGNDAINRRISLLVLSRQ 267 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 Q II+KK ++ GSWKI YADFMT +MA FLVMW+I + I +YF Sbjct: 2 KHQHPIIRKKRKSGHGGHHGGSWKIAYADFMTAMMALFLVMWLIAISTPMQLAQIAEYFR 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 K +T+ D +P + + + +++ + R + Sbjct: 62 TPLKVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLD 121 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 ++ + + L ++G + + + K + + P ++ + A+ Sbjct: 122 QLIEADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIA 178 >gi|152980650|ref|YP_001353771.1| flagellar motor protein MotD [Janthinobacterium sp. Marseille] gi|151280727|gb|ABR89137.1| MotB chemotaxis protein [Janthinobacterium sp. Marseille] Length = 259 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 10/195 (5%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 K + + P + + + K R+ +A+ I ++ LV+ Sbjct: 57 GGVAAKTQTIKDPVSQNAPILPLPIPTPAQRANEAVVKREKARMTSIARDILKAMAPLVS 116 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268 V T G+ + I +F + ++ L+ + +VL I + Sbjct: 117 QG---KVRVTQTNRGVSVEINAS---VLFAPGEAKLNAQSEAALRAVAQVLKDVDNDIQV 170 Query: 269 RGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 GHTD +P N NW LS RA S ++ + +GV+E R+ + G + ++D Sbjct: 171 EGHTDNTPINNTMFPSNWELSAVRASSVVRLFLANGVAEKRLVAM-GHGANLPVDSNDTT 229 Query: 328 NS--ANRRIDILVED 340 NRR+ +++ Sbjct: 230 EGRLRNRRVQLMILS 244 >gi|300921970|ref|ZP_07138116.1| OmpA family protein [Escherichia coli MS 182-1] gi|301325438|ref|ZP_07218924.1| OmpA family protein [Escherichia coli MS 78-1] gi|300421640|gb|EFK04951.1| OmpA family protein [Escherichia coli MS 182-1] gi|300847736|gb|EFK75496.1| OmpA family protein [Escherichia coli MS 78-1] Length = 211 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + E K +L K L +LA I++ + + E G+ + Sbjct: 4 PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 I D +N MF++ S+ +P +L ++ V I I GHTDA ++N +NW Sbjct: 61 LIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 LS DRA SA +VL ++G+ ED++ ++S A L + +P ++ NRRI+I+V + Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 175 >gi|114778645|ref|ZP_01453461.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1] gi|114551110|gb|EAU53671.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1] Length = 226 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 11/152 (7%) Query: 195 LAKKISSTLSGLVADNIVKGVLFET-TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + K+ + L A+ + E + I++ + FD +S+ P L Sbjct: 79 MDKQQAEFNRQLAAEQQAHQIEVERLQNENLKITMN---SEISFDYNSAQLKPAFTDTLN 135 Query: 254 KIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 K+ ++L I I GHTD + N +LS RA + L GV RI Sbjct: 136 KVADILKRYPRSTIRITGHTDNR---GSTQYNQQLSEQRAQAVKWYLSDRGVDPRRIIA- 191 Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 G + + +D NRR+++L+ Q Sbjct: 192 EGRGELQPRATNDTEAGRQLNRRVEMLIVPDQ 223 >gi|213967534|ref|ZP_03395682.1| motB protein [Pseudomonas syringae pv. tomato T1] gi|301382871|ref|ZP_07231289.1| flagellar motor protein MotD [Pseudomonas syringae pv. tomato Max13] gi|302062803|ref|ZP_07254344.1| flagellar motor protein MotD [Pseudomonas syringae pv. tomato K40] gi|302131302|ref|ZP_07257292.1| flagellar motor protein MotD [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927835|gb|EEB61382.1| motB protein [Pseudomonas syringae pv. tomato T1] Length = 295 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 57 NDTERTMKPIPIGEQRPVSVKPAEPLIKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + ++ +F ++P + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 TD P NW LS R+ S ++L G++ R++ + G+ + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGINPARLASV-GYGEFQPIAPNTTAAG 232 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 RAKNRRVVLVISR 245 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 3 RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTERT 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 K I + P S + I + ++ + + Q + + L S Q Sbjct: 63 MKPIPIGEQRP--VSVKPAEPLIKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120 >gi|162448390|ref|YP_001610757.1| putative ompA family protein [Sorangium cellulosum 'So ce 56'] gi|161158972|emb|CAN90277.1| putative ompA family protein [Sorangium cellulosum 'So ce 56'] Length = 617 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 73/266 (27%), Gaps = 14/266 (5%) Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 DE +R I K G ++ ++ + + Sbjct: 354 PSDRDEDGFLDRVDACPDTPGIANDDPKKHGCPPPGDRDKDGITDDVDACPDEAGPANED 413 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 G + + D I + QD Sbjct: 414 PKKHGCPPPPDRDGDGVIDAEDACPDIPGIRTSDPATNGCPGDRDGDTVRDDQDACPD-E 472 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 V T T I+I FD + + +L ++ VL Sbjct: 473 KGKPDPDPTKNGCPVAVRMTETEIVI-----LQQVQFDTGKATIKKVSDPLLDEVAGVLK 527 Query: 261 HSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E+ I GHTD N +LS RA S + L++ G+ +R++ G+ Sbjct: 528 EHPEITKIEVQGHTDPR---GGRAYNIKLSQARAESVTKALVQRGIEAERLAS-KGYGPD 583 Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342 +D NRR+ + +++ Sbjct: 584 VPIAENDTDEGRQKNRRVQFKILEKK 609 >gi|209883793|ref|YP_002287650.1| OmpA/MotB [Oligotropha carboxidovorans OM5] gi|209871989|gb|ACI91785.1| OmpA/MotB [Oligotropha carboxidovorans OM5] Length = 464 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ ++ P+++ +L ++ EV L ST I I GHTD+ A N LS RA S Sbjct: 363 FETGKAVIDPDSVGLLDRLVEVVLRCSTSQIEITGHTDS---NGDAESNLALSNRRAQSV 419 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 L+K+GV +RI+ I GF R +D + NRRI+ LV+ Sbjct: 420 ADYLIKAGVPSERITAI-GFGSGRPIAPNDTEEGKAQNRRIEFLVK 464 >gi|229172375|ref|ZP_04299934.1| OmpA/MotB domain protein [Bacillus cereus MM3] gi|228610846|gb|EEK68109.1| OmpA/MotB domain protein [Bacillus cereus MM3] Length = 227 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 83/226 (36%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L + + + + + + Sbjct: 6 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSQMLEKFSDVEQVDAKVMENTI 65 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + ++ L V +N + V TG+ + I+D +FD Sbjct: 66 PDISHEKNDEKMVSKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 122 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297 + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 182 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 227 >gi|190572988|ref|YP_001970833.1| putative outer membrane protein [Stenotrophomonas maltophilia K279a] gi|190010910|emb|CAQ44519.1| putative outer membrane protein [Stenotrophomonas maltophilia K279a] Length = 366 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 16/160 (10%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L D +++ + + + + I + FD S P+ + Sbjct: 214 ADLDDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDL----KGVNFDFDKSNLRPDAV 269 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + E+L + + + GHTD+ + N +LS RA + Y L K+GV R Sbjct: 270 AILSEATEILKRYPDLRVEVAGHTDS---KGTDAYNQKLSERRATAVYNYLTKNGVDAGR 326 Query: 309 ISKISGFAHHRLKIASD--------PMNSANRRIDILVED 340 + G+ R + + NRR ++ V++ Sbjct: 327 LVGPIGYGESRPIAPNTNPDGSDNPEGRAKNRRTELNVQN 366 >gi|307565706|ref|ZP_07628175.1| OmpA family protein [Prevotella amnii CRIS 21A-A] gi|307345532|gb|EFN90900.1| OmpA family protein [Prevotella amnii CRIS 21A-A] Length = 286 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 82/242 (33%), Gaps = 14/242 (5%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + + K+ + Q + NN S Q K S S + Sbjct: 31 TENNKLTNDYQSAKETIAANNARIKSLEDQLAQAKESAAALQGSLDKSLTSANYNNINIA 90 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + + ++ ++ K + L + + L+ ++ +K V + + + IS+ Sbjct: 91 KLVDQINESNQYIRHLVEVKTKSDSLNMALQNNLTRSLSREELKEVDIQVLKGVVYISLA 150 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------R 282 D ++ S L KI +++ I G+TD P R Sbjct: 151 DNM---LYKSGSYEINSRAEQTLSKIAKIIMDYNNYDVLIEGNTDNVPINTTNKIMANIR 207 Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 +NW LS RA S L GV RI+ G + + +D NRR I++ Sbjct: 208 NNWDLSALRATSVANYLQTRFGVDPSRITAG-GRGEYNPIVGNDTELGRQRNRRTQIIIT 266 Query: 340 DR 341 + Sbjct: 267 PK 268 >gi|260883956|ref|ZP_05895570.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str. C68] gi|297248510|ref|ZP_06932228.1| outer membrane protein [Brucella abortus bv. 5 str. B3196] gi|260873484|gb|EEX80553.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str. C68] gi|297175679|gb|EFH35026.1| outer membrane protein [Brucella abortus bv. 5 str. B3196] Length = 232 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 10/150 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A GV I++++ FD + L + Sbjct: 89 NYMDRQEAELRAQLQGTGVSVTRNGDRIILNMPSNIT---FDTDQDQVKSQFYPTLNSVA 145 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + + + G TD++ A N LS RA S L G+ R + G+ Sbjct: 146 IVLRKFDKTLVDVYGFTDST---GSASYNQALSQRRAASVASYLDSQGIDPRRF-SVIGY 201 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343 + +++ + NRR++I + +G Sbjct: 202 GASQPIVSNATPEGRAQNRRVEIQISPLRG 231 >gi|182418680|ref|ZP_02949956.1| chemotaxis protein MotB [Clostridium butyricum 5521] gi|237669705|ref|ZP_04529682.1| chemotaxis protein MotB [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377457|gb|EDT75012.1| chemotaxis protein MotB [Clostridium butyricum 5521] gi|237654779|gb|EEP52342.1| putative chemotaxis MotB protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 248 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 12/207 (5%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 Q++ K S ++ ++ N K A + ++ + Sbjct: 39 QTDKAKFQAMSKSFNQIFSGGTSMMQSDGNSIIPMDTISDGTGKSDAELEQDKMVAIKAV 98 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + ++ + + + G+ I++ D +FD + I +L K+ + Sbjct: 99 MEEEITS---EGYSDAINVDINEEGLYITVQD---VALFDSGKADIHQNVIPLLSKVSAM 152 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM--KSGVSEDRISKISGF 315 L I I GHTD P N N LS +RA + +L+ ++G+ ++ + I + Sbjct: 153 LNGLENEIKIVGHTDNVPIDNSEFHSNMDLSAERAINVRSLLVNSENGLDPEK-TSIEAW 211 Query: 316 AHHRLKIASDPM--NSANRRIDILVED 340 + K ++D + NRR++I+V Sbjct: 212 GELKPKASNDTEQGRAQNRRVEIVVSR 238 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 40/118 (33%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + +W + Y+D +T+L+A F+VM+ + TD +A+ + FN + Sbjct: 3 RKKQHHEEHVDEAWLLPYSDMLTLLLALFIVMFAMGQTDKAKFQAMSKSFNQIFSGGTSM 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + + P + S + K + + N+ Sbjct: 63 MQSDGNSIIPMDTISDGTGKSDAELEQDKMVAIKAVMEEEITSEGYSDAINVDINEEG 120 >gi|312970356|ref|ZP_07784537.1| lateral flagellar motor protein B [Escherichia coli 1827-70] gi|310337005|gb|EFQ02143.1| lateral flagellar motor protein B [Escherichia coli 1827-70] Length = 256 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 94/205 (45%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA ++N +NW LS DRA+SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRAFSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220 >gi|296313347|ref|ZP_06863288.1| OmpA family protein [Neisseria polysaccharea ATCC 43768] gi|296840164|gb|EFH24102.1| OmpA family protein [Neisseria polysaccharea ATCC 43768] Length = 225 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L V + I + + + F S++ L + Sbjct: 76 YMDYQEQRLRQSLTGTQVQVQRQGNQIKLVMPENVT---FATGSAVLSNNAQFALNTAAQ 132 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +I GHTD + N LS RA + L GV+ R+ + G+ Sbjct: 133 TLVQYPDTTLTINGHTDNT---GSDAVNNPLSQHRAQAVAYYLQSRGVAASRL-AVYGYG 188 Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342 H ++ + NRR++IL+ Q Sbjct: 189 SHMPVASNATAEGRAQNRRVEILINPDQ 216 >gi|171318847|ref|ZP_02907983.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] gi|171095946|gb|EDT40882.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] Length = 226 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 8/140 (5%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L+ L A + GI I I + +F+ + LP+ VL +I L+ Sbjct: 89 LASLDALKTSGRISLVRAPHGIEIGIDAK---ILFNVGDARLLPDATPVLSQIARALSEH 145 Query: 263 -TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 T I + GHTD+ P N NW LS RA S + L GV+ R++ I G A + Sbjct: 146 ATGDILVEGHTDSVPIANAKYESNWELSSARAGSVVRYLADRGVAPHRLAAI-GRADTQP 204 Query: 321 KIASD--PMNSANRRIDILV 338 +A D P + NRR+ I V Sbjct: 205 LVAGDDAPARARNRRVTIFV 224 Score = 45.7 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 16/29 (55%) Query: 27 PNNLGSWKIVYADFMTVLMAFFLVMWIIN 55 G W I YAD +T LM FL ++++ Sbjct: 24 GAQSGRWLISYADLITTLMVLFLALYVLQ 52 >gi|27366989|ref|NP_762516.1| outer membrane protein A [Vibrio vulnificus CMCP6] gi|37676767|ref|NP_937163.1| outer membrane protein [Vibrio vulnificus YJ016] gi|27358557|gb|AAO07506.1| Outer membrane protein A precursor [Vibrio vulnificus CMCP6] gi|37201310|dbj|BAC97133.1| outer membrane protein [Vibrio vulnificus YJ016] Length = 357 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 7/146 (4%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 A+++ + + E + Q N +F SS L + Sbjct: 203 AEEVKQEEPVAEPILLAEEPKPEPKPEWVTKFSNQQYNQELFATGSSKLSAGGKQALTPL 262 Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 EVL + I GHTD++ + N R+S RA + L++ GV +++ + G Sbjct: 263 AEVLIKYPDAEAEIVGHTDST---GSEKVNQRISEQRAQAVADYLVEQGVKAEQLK-VRG 318 Query: 315 FAHHRLKIASDPM--NSANRRIDILV 338 + ++ + NRR+++ + Sbjct: 319 AGESQPIASNKTAEGRAQNRRVEVTI 344 >gi|330504604|ref|YP_004381473.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] gi|328918890|gb|AEB59721.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] Length = 261 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 74/220 (33%), Gaps = 11/220 (5%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + ++ + E + D + + + + + + A Sbjct: 39 QSDPQSSKVAALETKEAQEWLNKADKAYMDKEDEKKVDQLAYLTNQRVEVAKQTIALRTA 98 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K + + + + + T G L++ D +FD + + Sbjct: 99 EAELKNSSAQRAQALLDARDAQIRKLQESLNAKQTERGTLVTFGD----VLFDFNKADLK 154 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + + ++ L + E + G+TD+ A N LS RA S + L+++GV Sbjct: 155 SSALPNITQLARFLQENPERQVIVEGYTDSV---GSASYNQGLSERRAESVRRALIRAGV 211 Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 RI G+ + D + NRR+++ + + Sbjct: 212 EPTRIVA-QGYGKEYPVADNSSDSGRAQNRRVEVTISNDN 250 >gi|229160692|ref|ZP_04288684.1| OmpA/MotB domain protein [Bacillus cereus R309803] gi|228622707|gb|EEK79541.1| OmpA/MotB domain protein [Bacillus cereus R309803] Length = 226 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 5 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDAEQVDAKVMENTI 64 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + + L V +N + V TG+ I I+D +FD Sbjct: 65 PDISHEKNDEKMVSKKRMDDLYKKLKAYVDNNGISQVNVYREDTGVSIVIVDNL---IFD 121 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297 + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 122 TGDASVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 181 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 182 HLIEVYHVDDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 226 >gi|242309709|ref|ZP_04808864.1| cadf [Helicobacter pullorum MIT 98-5489] gi|239523710|gb|EEQ63576.1| cadf [Helicobacter pullorum MIT 98-5489] Length = 308 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS PE +Q E + + + +I GHTD++ N +LS RA S Sbjct: 204 FPSDSSSVNPEYYPEIQDFAEYMKQNPDKTATISGHTDST---GSEAYNQKLSERRAISV 260 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 + ++K G+S DR+ G+ + + NRR++ Sbjct: 261 KEEIVKQGISPDRLDT-KGYGEEKPIATNKTKEGRQANRRVE 301 >gi|163732619|ref|ZP_02140064.1| OmpA family domain protein [Roseobacter litoralis Och 149] gi|161393979|gb|EDQ18303.1| OmpA family domain protein [Roseobacter litoralis Och 149] Length = 210 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L D V T +++S+ +F S P+ L + Sbjct: 70 NLDQQEAELRRDLGNDDVQITNTGDRLIVSLPQDL---LFATDSFSVRPDLQNDLYTVAG 126 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + I + GHTD+ A N +LS RA S +LM +GV+ R+ I G Sbjct: 127 SLQNYPASTIQVIGHTDSD---GDAAYNQQLSERRAGSVAGILMNAGVTSSRLQTI-GRG 182 Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339 + + ++ + NRR++I++ Sbjct: 183 ESQPVASNLNETGKAQNRRVEIVIL 207 >gi|331681649|ref|ZP_08382282.1| MbhA protein [Escherichia coli H299] gi|331080851|gb|EGI52016.1| MbhA protein [Escherichia coli H299] Length = 261 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 92/205 (44%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 21 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 81 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 140 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I GHTDA ++N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 141 PVFDSLDNKIIFTGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 200 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 201 DQMLLDAKNPQSAGNRRIEIMVLTK 225 >gi|307301173|ref|ZP_07580935.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C] gi|307321074|ref|ZP_07600479.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83] gi|306893246|gb|EFN24027.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83] gi|306903629|gb|EFN34216.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C] Length = 227 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 62/169 (36%), Gaps = 11/169 (6%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + A + + S L A GV I++++ F Sbjct: 66 DAALVGAGIGALGGGLVGNYMDQQESELRAQLQGTGVSVTRAGDRIILNMPSNIT---FA 122 Query: 239 KSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 +P L + VL + +I + GHTD++ A N LS RA S Sbjct: 123 TDRDQVIPAFYSTLDSVAIVLRKFNKTLIDVDGHTDST---GSASYNQGLSERRAASVAN 179 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED-RQG 343 L GV + R+S + G+ R ++ + NRR++I + +QG Sbjct: 180 YLASRGVDQRRMSAV-GYGLERPIASNATEVGRAQNRRVEISIAPIKQG 227 >gi|197124193|ref|YP_002136144.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] gi|196174042|gb|ACG75015.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] Length = 543 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 77/231 (33%), Gaps = 15/231 (6%) Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 G ++ +Q L+++ + N Q + + + + +++ + Sbjct: 323 GQSHTPEQCPALDDDGDGVPNGQDRCPLEKGVAENQGCPDKDTDGDGVPDRLDRCPSVPG 382 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 ++ + D + + + + I + Sbjct: 383 ATDNQGCPKDSDKDGVPDDKDRCPDKPGIPENQGCPPERAEIKAGKIEI-------KEKV 435 Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD + ++ +L + +++ V++I GHTD++ A N LS RA Sbjct: 436 YFDTGKATIKAQSNALLDDVAKLIAANPQVGVVTIEGHTDST---GSAATNRALSQKRAE 492 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + L+ GV R+ GF + ++ NRR++ +++ Sbjct: 493 AVKDYLVSKGVDASRLEA-KGFGPDQPVESNKTAKGREANRRVEFTIQNAN 542 >gi|77918162|ref|YP_355977.1| hypothetical protein Pcar_0547 [Pelobacter carbinolicus DSM 2380] gi|77544245|gb|ABA87807.1| conserved OmpA/MotB domain protein [Pelobacter carbinolicus DSM 2380] Length = 420 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 73/244 (29%), Gaps = 16/244 (6%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 T+ V + ++ L+ + T L + D K Sbjct: 174 GTEQPVKKEPVDSDGDGVTDDLDQCPDTPKGAPVDAKGCPLDTDGDGVFDYLDQCPDTPK 233 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + + + + L D + Sbjct: 234 GAPVDAKGCPLDTDGDGVFDYLDQCPDTPKGAPVDAKGCPLDTDGDGVFDYLDQCPDTPK 293 Query: 226 ISIIDQRNTPM-------FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASP 276 +D++ + FD ++ PE L K + + V I GHTD+ Sbjct: 294 GMNVDEKGCDLKLTLRINFDFDQAVIKPEFKGELDKAAAFVRANANVPFILLAGHTDS-- 351 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333 + N RLS RA + Q L+ + G+ ++ G+ + +D NRR Sbjct: 352 -KGRDTYNQRLSEKRAEAVRQALIDNYGLDAAKLKS-RGYGEAQPVATNDTEEGRYLNRR 409 Query: 334 IDIL 337 ++++ Sbjct: 410 VELI 413 >gi|74318472|ref|YP_316212.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259] gi|74057967|gb|AAZ98407.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259] Length = 402 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 82/296 (27%), Gaps = 45/296 (15%) Query: 52 WIINATDDDTKKAIEQ-YFNPFGKNLMTASKG------IFDEQNPPERSSQNKIDLSIDE 104 W + D + F ++ + P + ID Sbjct: 140 WAFGSNDALRWELRADRSFGNDALPGAGLTQVQVLVGYAWGLGEPSDADGDGVIDRVEQC 199 Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 T + + + + ++ + G + + D Sbjct: 200 PGTPKGAAVDALGCPLDSDADGVFDGLDRCPSTPPGATVDAAGCPSDRDGDGVPDARDKC 259 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + + P + + + + +++ Sbjct: 260 PAEAGRGSADGCPPRAAREAEPEPEPPRPSMPRRM------------------------- 294 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 + F+ S P++I +L L E + + GHTD++ A Sbjct: 295 ------TLDGVSFEPGSVRLTPDSITILDNAAASLNAWGEVRVEVAGHTDSTH---SAAF 345 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 N LS RA + L+K GV +R++ G+ + + + NRR++++ Sbjct: 346 NLELSQRRAEAVRAYLVKKGVRAERLTA-RGYGESQPVADNRTAAGRAQNRRVELV 400 >gi|312891209|ref|ZP_07750731.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] gi|311296376|gb|EFQ73523.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] Length = 267 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 10/197 (5%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 EK L S + + L ++ + + L + Sbjct: 65 DEKYNGLNSRYTASSSKVSQLSTDLQKREARLKEVEDILRKRDEATNALKEKLQKALLGF 124 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IR 269 G+ + + +S+ D+ +F S + + L+++ VL ++ + Sbjct: 125 QQSGLTVDIRNGKVYVSLADKL---LFPSGSIVIDEKGKSALKQLAAVLNKEPDIYIAVE 181 Query: 270 GHTDASPFR--NIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP 326 GHTD +DNW LS+ RA S + L + V R++ +G + + Sbjct: 182 GHTDDKKVINLGQIKDNWDLSVLRATSVTRYLTETEKVDPVRLTA-TGKGQFQPIDPAGT 240 Query: 327 --MNSANRRIDILVEDR 341 + NRRI+I++ R Sbjct: 241 PEARAKNRRIEIVLSPR 257 >gi|271500049|ref|YP_003333074.1| OmpA/MotB domain-containing protein [Dickeya dadantii Ech586] gi|270343604|gb|ACZ76369.1| OmpA/MotB domain protein [Dickeya dadantii Ech586] Length = 376 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 85/216 (39%), Gaps = 4/216 (1%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 L+ + + S + + + + + + Sbjct: 50 PSQLAQIAEYFRTPLKIAITSGPKISDASNPIPGGGSDPTQQEGDVKRQIDTMDGRLEEI 109 Query: 191 RLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +L L +++ + + +L E G+ I IID N PMF S+ P Sbjct: 110 KLNKLRERLDQLIEADPRLRALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMS 169 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L+ I +L IS+ GHTD + + NW LS DRA ++ + L+ G+++ Sbjct: 170 DILRAIAPILNDIPNKISLSGHTDDAQYAMGERGYSNWELSADRANASRRELIAGGLADG 229 Query: 308 RISKISGFAHHRLKIASDPM-NSANRRIDILVEDRQ 342 ++ ++ G A + ++ NRRI ++V ++Q Sbjct: 230 KVLRVVGMADTMNLKQAKGGSDAINRRISLVVLNKQ 265 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 50/107 (46%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 Q II+KK ++ GSWKI YADFMT +MA FLVMW+I + I +YF Sbjct: 2 KHQHPIIRKKRKSGHAAHHGGSWKIAYADFMTAMMALFLVMWLIAISSPSQLAQIAEYFR 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 K +T+ I D NP + D +++D ++ Sbjct: 62 TPLKIAITSGPKISDASNPIPGGGSDPTQQEGDVKRQIDTMDGRLEE 108 >gi|149277137|ref|ZP_01883279.1| outer membrane protein, OmpA family [Pedobacter sp. BAL39] gi|149232014|gb|EDM37391.1| outer membrane protein, OmpA family [Pedobacter sp. BAL39] Length = 280 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 75/189 (39%), Gaps = 10/189 (5%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 K S + + L + + ++ + ++ L + G+ E Sbjct: 86 KLRSNSSSEINKLSQDLKKREQRLKEVEEILRKRDEATNQLKEKLQQALLGFTKSGLTVE 145 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF 277 + +S+ D+ +F S + + L ++ VL E+ + GHTD+ Sbjct: 146 IKNGKVYVSMTDKL---LFPSGSIVIDEKGKQALTQLATVLKQQPEINIAVEGHTDSQKI 202 Query: 278 R--NIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA--SDPMNSANR 332 +DNW LS+ R+ S + L + + V R++ +G + ++ + S NR Sbjct: 203 TNLGQIKDNWDLSVLRSTSVVRYLTEVNKVESVRMTA-TGKGEFQPLVSNANAEGRSKNR 261 Query: 333 RIDILVEDR 341 RI+I++ + Sbjct: 262 RIEIVLSPK 270 >gi|309797860|ref|ZP_07692242.1| OmpA family protein [Escherichia coli MS 145-7] gi|308118544|gb|EFO55806.1| OmpA family protein [Escherichia coli MS 145-7] Length = 211 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 87/172 (50%) Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 E + A+ +KK +L + +S + ++ + E G+ + I Sbjct: 4 PEETEKKARDVNEKTALLKKKSATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIK 63 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 D +N MF++ S+ +P +L ++ V I I GHTDA ++N +NW LS Sbjct: 64 DDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSG 123 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 DRA SA +VL ++G+ ED++ ++S A L + +P ++ NRRI+I+V + Sbjct: 124 DRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 175 >gi|260557560|ref|ZP_05829775.1| OmpA/MotB [Acinetobacter baumannii ATCC 19606] gi|260409186|gb|EEX02489.1| OmpA/MotB [Acinetobacter baumannii ATCC 19606] Length = 471 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 31/255 (12%), Positives = 82/255 (32%), Gaps = 8/255 (3%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 + ++ + ++ I + ++ ++ + ++ + Y + + L Sbjct: 219 STDDKGAVSQCQAGIGDQGFLATLQTQVKQVFSATKDCDVDTSQTYAAAFTDKDALAGVL 278 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 + + ++ + L L+ + + + + + ++S + Sbjct: 279 GALKGIPNASLEWVGDKITLKAGDAAALEALTAKVKALVPHTEVVASAPETAEQSVSNSL 338 Query: 208 ADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 + + + + + F SS + +L + +L + V Sbjct: 339 SASQTALTAIDPNNVDVNALVKALNLQIINFASGSSDIPADNKAILDQAATLLNKVSGVK 398 Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 + GHTD++ A N LS RA + L+ GV ++ G + + Sbjct: 399 LDVGGHTDST---GNAAANKALSQRRAQAVVDYLVSKGVDASKLVA-KGHGSEQPVADNT 454 Query: 326 PMNSA--NRRIDILV 338 NRRI+ V Sbjct: 455 TEEGRFKNRRIEFSV 469 >gi|229096214|ref|ZP_04227187.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29] gi|229102326|ref|ZP_04233035.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28] gi|229115169|ref|ZP_04244579.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3] gi|228668309|gb|EEL23741.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3] gi|228681227|gb|EEL35395.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28] gi|228687174|gb|EEL41079.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29] Length = 213 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 11/218 (5%) Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ L + S + K L K +D E+ K +P ++ EK Sbjct: 3 TFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDAEQVDAKVMENTIPDITHEKNDEK 62 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 K+ ++ L V +N + V TG+ + I+D +FD + P Sbjct: 63 MISKK---RMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFDTGDANVKP 116 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGV 304 E ++ ++ I + GHTD+ P N NW LS RA + L++ V Sbjct: 117 EAKEIMSQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYNV 176 Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 + R++ + G+A + + +D NRR+ I +++ Sbjct: 177 DDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 213 >gi|94970975|ref|YP_593023.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter versatilis Ellin345] gi|94553025|gb|ABF42949.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter versatilis Ellin345] Length = 407 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 82/288 (28%), Gaps = 14/288 (4%) Query: 52 WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111 W + DD A F + + + ++T Sbjct: 122 WANASVDDG---ASPMRFTMDLIEVTPPPISMTLHEPAQTPEKMPTGGKGDFPYLTPMPG 178 Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + G + ++ +N D + + D + Sbjct: 179 SVAHGGQEEDTPFRLTPKGASQDEIVANGSVLRNYSLNDGSQILFVAVYHDALLKAGWDI 238 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 P K + L S V + ++ ++ Sbjct: 239 EQETPNAEVIVAHYGKHGRNLWAYLIDHGEEYSFRVGKEAAP----DQMKSKLIADCHVA 294 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 +FD + + PE+ L ++G +L ++ + ++GHTD N LS Sbjct: 295 IYGVLFDFNKATLQPESDGPLGQVGALLTANSSLNVEVQGHTDNV---GTDAYNQTLSEA 351 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 RA S L + GV+ R++ G+ + + NRR++I Sbjct: 352 RAKSVMTWLTQHGVAPGRMTA-KGYGKTMPVADNKTDDGRMKNRRVEI 398 >gi|300114861|ref|YP_003761436.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113] gi|299540798|gb|ADJ29115.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113] Length = 249 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 12/151 (7%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + D +++ + L+ + ++ + + D + FD S P + Sbjct: 87 MNDQQREMEAALAEERRRHQLEIQRLQDESLKL-----DIPSEVSFDHDSDALKPAFLPT 141 Query: 252 LQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L KI +VL V+ + GHTD++ + N LSL RA + L + G+ R+ Sbjct: 142 LDKIADVLKKYNKTVVHVIGHTDST---GAEKYNLDLSLRRAGNVALYLERQGIPSQRL- 197 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVE 339 I G + + ++ + NRR++I+++ Sbjct: 198 SIYGRGENEPRASNATASGRQLNRRVEIILK 228 >gi|238793598|ref|ZP_04637221.1| Lateral flagellar proton motor protein B [Yersinia intermedia ATCC 29909] gi|238727013|gb|EEQ18544.1| Lateral flagellar proton motor protein B [Yersinia intermedia ATCC 29909] Length = 255 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 4/230 (1%) Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + + S ++++ N S S + + + +++ + Sbjct: 3 VGVVSEEERQEIVAQLNGQTIFSQQSFISIPSKSKSGGGKFSDSIDGKEQAKETKSNLAV 62 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P + + K +K +++L++ I S + + E G+ I I D + Sbjct: 63 EVPEPEQSLEEVVDKSRKEMEELSRIIMQITSAY---DAQSNLQMEVVPQGLRILIQDDK 119 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDR 291 MF +SS++ P +L ++ I I GHTDAS +R+ +NW LS +R Sbjct: 120 QRDMFQRSSAVLTPFFNRLLAELAPAFNEMDNKIIITGHTDASRYRDQVLYNNWNLSGER 179 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 A A++ L+K G+SE R+ +I+ A L ++P+ + NRRI+I+V + Sbjct: 180 ALMAHKALVKGGLSEGRVLQINAMADQMLLDPAEPLAAKNRRIEIMVLTK 229 >gi|331016979|gb|EGH97035.1| flagellar motor protein MotD [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 295 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 57 NDTERTMKPIPIGEQRPVSVKPAEPLIKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + ++ +F ++P + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFFSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 TD P NW LS R+ S ++L G++ R++ + G+ + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGINPARLASV-GYGEFQPIAPNTTAAG 232 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 RAKNRRVVLVISR 245 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 3 RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTERT 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 K I + P S + I + ++ + + Q + + L S Q Sbjct: 63 MKPIPIGEQRP--VSVKPAEPLIKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120 >gi|251789151|ref|YP_003003872.1| flagellar motor protein MotB [Dickeya zeae Ech1591] gi|247537772|gb|ACT06393.1| OmpA/MotB domain protein [Dickeya zeae Ech1591] Length = 376 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 85/216 (39%), Gaps = 4/216 (1%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 L+ + + S + + + + + + Sbjct: 50 PSQLAQIAEYFRTPLKIAITSGPKMSDASNPIPGGGSDPTQQEGDVKRQIDTMDGRLEEI 109 Query: 191 RLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +L L +++ + + +L E G+ I IID N PMF S+ P Sbjct: 110 KLNKLRERLDQLIEADPRLRALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMS 169 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L+ I +L IS+ GHTD + + NW LS DRA ++ + L+ G+++ Sbjct: 170 DILRAIAPILNDIPNKISLSGHTDDAQYAMGERGYSNWELSADRANASRRELIAGGLADG 229 Query: 308 RISKISGFAHHRLKIASDPM-NSANRRIDILVEDRQ 342 ++ ++ G A + ++ NRRI ++V ++Q Sbjct: 230 KVLRVVGMADTMNLKQAKGGSDAINRRISLVVLNKQ 265 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 34/107 (31%), Positives = 50/107 (46%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 Q II+KK ++ GSWKI YADFMT +MA FLVMW+I + I +YF Sbjct: 2 KHQHPIIRKKRKSGHAAHHGGSWKIAYADFMTAMMALFLVMWLIAISSPSQLAQIAEYFR 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 K +T+ + D NP + D +++D ++ Sbjct: 62 TPLKIAITSGPKMSDASNPIPGGGSDPTQQEGDVKRQIDTMDGRLEE 108 >gi|237747593|ref|ZP_04578073.1| outer membrane protein A [Oxalobacter formigenes OXCC13] gi|229378955|gb|EEO29046.1| outer membrane protein A [Oxalobacter formigenes OXCC13] Length = 207 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 7/113 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD SI PE L ++ + L+ + + GHTD + N +LS RA Sbjct: 96 DAFFDFDKSIVKPEGKAKLDELIKALSGMDTEVIVAVGHTDWI---GTDKYNQKLSERRA 152 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 + L+ GV ++I G + ++ + NRR+++ V +G Sbjct: 153 NAVKAYLVSKGVPANKIFT-EGKGKKQPIASNKTREGRAKNRRVEVEVVANRG 204 >gi|331011090|gb|EGH91146.1| flagellar motor protein MotD [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 295 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 66/193 (34%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + ++ + E+ A + L Sbjct: 57 NDTERTMKPIPIGDQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + ++ +F +IP + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 TD P NW LS R+ S ++L GV+ R++ + G+ + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIAPNTTAAG 232 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 RAKNRRVVLVISR 245 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 9/136 (6%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +++ A + + W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 1 MARRRPAEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 K P Q + + E + K+S G + + Sbjct: 59 TERTMK-------PIPIGDQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDA 111 Query: 136 NSQQSEHCKNSLTRDS 151 + + ++ + Sbjct: 112 FGDLIKSDQMTVRGNE 127 >gi|325498393|gb|EGC96252.1| hypothetical protein ECD227_2490 [Escherichia fergusonii ECD227] Length = 256 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 92/205 (44%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPTHPLKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA +++ +NW LS DRA SA +VL +G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEDAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P +S NRRI+I+V + Sbjct: 196 DQMLLDAKNPQSSGNRRIEIMVLTK 220 >gi|92115424|ref|YP_575352.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043] gi|91798514|gb|ABE60653.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043] Length = 226 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 67/171 (39%), Gaps = 10/171 (5%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + + I A + + + L D G+ + I++++ Sbjct: 57 DGSTSRRDRALIGAAAGAAIGGGVGAYMDAQEEKLRRDLDGTGIGVDRQGDNIVLNM--- 113 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 ++ FD SS L V+ I++ G+TD++ A N RLS Sbjct: 114 PSSVTFDVDSSALKTPARQALNDATAVMREYPKTRINVAGYTDST---GSADYNQRLSER 170 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 RA + L + G++ +RI+ + G+ + ++D + NRR++I + Sbjct: 171 RAQAVADYLGQGGIAANRINTV-GYGERQPVASNDTESGRAQNRRVEITLT 220 >gi|315225274|ref|ZP_07867091.1| OmpA domain protein [Capnocytophaga ochracea F0287] gi|314944957|gb|EFS96989.1| OmpA domain protein [Capnocytophaga ochracea F0287] Length = 360 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 8/127 (6%) Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFR 278 ++ I T +FD S+ P+ +L I ++ + + + GHTD + Sbjct: 238 RTQRVVKQINLYAKTILFDTDKSVVKPQAEFILDNIAIIMNENPDFNFVVEGHTDNT--- 294 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 N +LS DRA + Q L + GVS+ R+ G+ R +++ NRR++I Sbjct: 295 GTPEHNLKLSQDRADAIKQYLSRHGVSKKRLDA-KGYGQTRPIESNETERGKEINRRVEI 353 Query: 337 -LVEDRQ 342 +V+D Q Sbjct: 354 NVVKDNQ 360 >gi|323498433|ref|ZP_08103429.1| outer membrane protein A precursor [Vibrio sinaloensis DSM 21326] gi|323316506|gb|EGA69521.1| outer membrane protein A precursor [Vibrio sinaloensis DSM 21326] Length = 322 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +S+ PE+ +L ++ + + + + G+TD A N +LS R Sbjct: 210 DSGSFALNSTELKPESKQILNELVVFMNEYPQANVEVVGYTDT---SGAAAYNQKLSEKR 266 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A S L G+ RI + G + +++ NRR++I V Sbjct: 267 AQSVSDALQAEGIDASRI-TVRGEGENNPIASNETKEGRVQNRRVEITV 314 >gi|257484887|ref|ZP_05638928.1| flagellar motor protein MotD [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 295 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 66/193 (34%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + ++ + E+ A + L Sbjct: 57 NDTERTMKPIPIGDQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + ++ +F +IP + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 TD P NW LS R+ S ++L GV+ R++ + G+ + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIAPNTTAAG 232 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 RAKNRRVVLVISR 245 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 9/136 (6%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +++ A + + W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 1 MARRRQAEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 K P Q + + E + K+S G + + Sbjct: 59 TERTMK-------PIPIGDQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDA 111 Query: 136 NSQQSEHCKNSLTRDS 151 + + ++ + Sbjct: 112 FGDLIKSDQMTVRGNE 127 >gi|262279684|ref|ZP_06057469.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202] gi|262260035|gb|EEY78768.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202] Length = 473 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 81/271 (29%), Gaps = 17/271 (6%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P L T KG + L + ++ T+Q + + Sbjct: 215 PASLTLSTDDKGAVSQCQAGIGDQGFLATLQTNVKKVFSTTQDCNVDTSQTYAASFTDKD 274 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 SL +K +++ + +P + ++ Sbjct: 275 ALAGVLGALKGVPNASLEWVGDKITLKAGDAAALEALTAKVKALVPHTEVVAAAPVTAEQ 334 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + + L+ + +N+ L + I+ F SS + Sbjct: 335 SVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN----------FASGSSEIPADNKA 384 Query: 251 VLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L + +L + V ++ GHTD++ A N LS RA + L GV ++ Sbjct: 385 ILDQAVTLLNKVSGVKLNVGGHTDST---GNAASNKALSQRRAQAVVDYLTSKGVDASKL 441 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338 G + + NRRI+ V Sbjct: 442 VA-QGHGSDQPVAENTTDEGRFKNRRIEFSV 471 >gi|300722595|ref|YP_003711885.1| flagella protein [Xenorhabdus nematophila ATCC 19061] gi|297629102|emb|CBJ89687.1| enables flagellar motor rotation, linking torque machinery to cell wall [Xenorhabdus nematophila ATCC 19061] Length = 333 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 10/206 (4%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-T 202 + + + + + +++ A + +RL L +++ Sbjct: 65 PLQVAINKGHQSSDSTNPIPGGGDDVFQQDGEIFRQTKEVEASEENRRLNRLHQQLDQLI 124 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ + +L + G+ I IID+ N PMF S+ +LQ I +L Sbjct: 125 ITDPRLKELRPHLLIDMMDEGLRIQIIDRENRPMFMIGSAKVESYMSDILQAIAPILNDI 184 Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-- 318 IS+ GHTD+ + N NW LS DRA ++ + L+ G+ E +I ++ G A Sbjct: 185 PNKISLSGHTDSLKYANGQRGYSNWELSSDRANASRRELLVGGLDEVKILRVVGMASTVS 244 Query: 319 --RLKIASDPMNSANRRIDILVEDRQ 342 + + P+ NRRI I+V +++ Sbjct: 245 MQKGIDPNAPV---NRRISIIVLNKE 267 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 74/179 (41%), Gaps = 2/179 (1%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + N+ +I KK + + GSWKI YADFMT +MAFFLVMW+I+ +I +Y Sbjct: 2 RANNVSVIRVKKRKKHNPSQHGGSWKIAYADFMTAMMAFFLVMWLISIASPQELTSIAEY 61 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F + + D NP + D I + + +++ N++ + Sbjct: 62 FRTPLQVAINKGHQSSDSTNPIPGGGDDV--FQQDGEIFRQTKEVEASEENRRLNRLHQQ 119 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + +++ + E + L ++G + + + + + + + A+ Sbjct: 120 LDQLIITDPRLKELRPHLLIDMMDEGLRIQIIDRENRPMFMIGSAKVESYMSDILQAIA 178 >gi|327397929|gb|AEA73286.1| MopB [Stenotrophomonas maltophilia] Length = 363 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 16/160 (10%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L D +++ + + + + I + FD S P+ + Sbjct: 211 ADLDDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVN----FDFDKSNLRPDAV 266 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + E+L + + + GHTD+ + N +LS RA + Y L K+GV R Sbjct: 267 AILSEATEILKRYPDLRVEVAGHTDS---KGTDAYNQKLSERRATAVYNYLTKNGVDAGR 323 Query: 309 ISKISGFAHHRLKIASD--------PMNSANRRIDILVED 340 + G+ R + + NRR ++ V++ Sbjct: 324 LVGPIGYGESRPIAPNTNPDGSDNPEGRAKNRRTELNVQN 363 >gi|162452747|ref|YP_001615114.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] gi|161163329|emb|CAN94634.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 386 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 85/278 (30%), Gaps = 12/278 (4%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + + P + + ++ D+ + G T+ K Sbjct: 112 RGFVEEAPPPKPGDCDGDGLLDPQDKKCPCDAETWNGFQDDDGCPDDPDTDGDGLTDSKD 171 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 L + + N L + + + Y E Sbjct: 172 SCVLLPEDKDGYLDEDGCPELDNDLDTILDANDKDSTGKNCANDPEDPDGYEDADGCPEP 231 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 L+D + G K L T I I+ F+ Sbjct: 232 DNDQDTVVDLEDQCPNEPGVVGGDKPGCPKKPSLVIVTEKEIKITQQIH-----FEFDKD 286 Query: 243 IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 PE+ +L + +VL + ++ I+GHTD + A N +LS RA S + L+ Sbjct: 287 KIRPESFPILDAVVDVLQQNPKIKIEIQGHTDN---KGAAAYNKKLSDRRAASVKKYLVA 343 Query: 302 SGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 G+ E R++ G+ + + + D + NRR+ + Sbjct: 344 KGIDEARLTS-KGYGMEQPIVPNTSDQNRALNRRVQFV 380 >gi|585710|sp|P37726|PORF_PSEFL RecName: Full=Outer membrane porin F; AltName: Full=Root adhesin; Flags: Precursor gi|5668610|gb|AAD45981.1| OprF [Pseudomonas fluorescens] Length = 326 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 85/283 (30%), Gaps = 9/283 (3%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 K IE FNP + + + + + + D + + I ++ L + Sbjct: 45 KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGSQKIGGDTSSLTAQYHFGQA 104 Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 R + S+ + RD + N + Sbjct: 105 GVDSLRPYVEGGFGHQSRGNVKADGHSGRDQSTLAIAGAGVKYYFTNNVYARAGVEADYA 164 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + A + ++ FD Sbjct: 165 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 224 Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ P + ++ + + +A + + GHTD+ N +LS RA QVL Sbjct: 225 KSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSI---GPDAYNQKLSQRRADRVKQVL 281 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 +K GV+ RI+ + G+ R + NRR++ VE Sbjct: 282 VKDGVAPSRITAV-GYGESRPVADNATEAGRAVNRRVEASVEA 323 >gi|330880603|gb|EGH14752.1| flagellar motor protein MotD [Pseudomonas syringae pv. glycinea str. race 4] Length = 262 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 66/193 (34%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 24 NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 83 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + ++ +F +IP + +++K+ ++ I + G Sbjct: 84 KSDQMTVRGNELWIEIELN---SSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEG 140 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 TD P NW LS R+ S ++L GV+ R++ + G+ + + Sbjct: 141 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIAPNTTAAG 199 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 200 RAKNRRVVLVISR 212 >gi|255530239|ref|YP_003090611.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366] gi|255343223|gb|ACU02549.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366] Length = 280 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 76/197 (38%), Gaps = 10/197 (5%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 SE + K + + + L + + ++ + K+ L + Sbjct: 78 SEMDNNYSKLRSNSSTEINKLSADLKKREQRLKEVEEILRKRDEATNKLKEKLQQALLGF 137 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IR 269 G+ E + +S+ D+ +F S I + L ++ +VL E+ + Sbjct: 138 TQSGLTVEIKNGKVYVSLTDKL---LFPSGSIIIDEKGKQALTQLADVLKQQPEINIAVE 194 Query: 270 GHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP 326 GHTD+ +DNW LS+ R+ S + L + V R++ +G + + Sbjct: 195 GHTDSQKITNLGQIKDNWDLSVLRSTSVVRFLTEICKVQPVRMTA-TGKGEFQPLGPNTS 253 Query: 327 MNSA--NRRIDILVEDR 341 S NRRI+I++ + Sbjct: 254 AESRSKNRRIEIVLSPK 270 >gi|237799262|ref|ZP_04587723.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806231|ref|ZP_04592935.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022118|gb|EGI02175.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027345|gb|EGI07400.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str. 1_6] Length = 296 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 57 NDTERTMKPIPIGEQRPVSTKPAEPLLKESEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + ++ +F ++P + +++K+ +++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELN---SSLLFVSGDAMPSDKAFTIIEKVSDIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 TD P R NW LS R+ S ++L GV+ R++ + G+ + ++ Sbjct: 174 FTDDQPIRTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPVASNATAAG 232 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 RAKNRRVVLVISR 245 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + N W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 3 RRRQPEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKILSQALVGVFNDTERT 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 K I + P S + + E ++ + + Q + + L S Q Sbjct: 63 MKPIPIGEQRP--VSTKPAEPLLKESEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120 >gi|296328184|ref|ZP_06870715.1| outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154696|gb|EFG95482.1| outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 394 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 84/272 (30%), Gaps = 10/272 (3%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + + DE +R+ + VD + ++ + Sbjct: 125 TVQTDGKGAGQYTDENVTIQRNEDGSGQYTNKITGVTLQVDAQGEGQYLDEKNKISFQIG 184 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + E+ ++T + +E + + Y K K Sbjct: 185 ADGTGVYKDENNDTTITIGENNSTYTKGNITIENNGDGSGTYNDKDKELLIENDGKGKAI 244 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETI 249 + K I L + I + +I + +FD PE Sbjct: 245 ITLKGKTIEVEAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDVRPEAE 304 Query: 250 VVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 VL+ + VL + + I GHTD+ N LS +RA + L G+ + Sbjct: 305 EVLKNLVIVLKEADIKAFEIDGHTDSD---ASDEHNQVLSENRANAVKNFLTSQGIMAE- 360 Query: 309 ISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 I G+ R ++D NRR++I++ Sbjct: 361 -ITIKGYGESRPIASNDTPEGKQKNRRVEIVI 391 >gi|95930659|ref|ZP_01313393.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684] gi|95133311|gb|EAT14976.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684] Length = 303 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 112/300 (37%), Gaps = 22/300 (7%) Query: 47 FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106 F ++ T + +L ++ + + Q I E Sbjct: 12 LFALLSTSGCVSKATYQQQLDQNQTLQTDLYGTTEKLNNLQ----------ARYDIVEQQ 61 Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 ++++ +Q + + + ++ + + + ++ + + ++ Sbjct: 62 LEDAMAQNRALNDQNIAAMAEIDRLKNIFQARSQQQQEQLSALEQQQQELEAQQEQQQQR 121 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + + + + + R+ RL +A +S ++ L + + + + + Sbjct: 122 YQQLLDNKQQLEQELERERIAREARLAKMANTYNSLVANLEQEIERGEITINKLKDKLTV 181 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR----NIA 281 +++++ +F S+ P I V++++G++L + I + GHTD Sbjct: 182 NLVEK---ILFPSGSADLTPAGIKVIRQVGDILKEVDDKDIRVEGHTDNLGISKALQAKF 238 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 NW LS RA + +VL + G+ +++ +I + ++D + NRRI I++ Sbjct: 239 PSNWELSAARAANVVRVLQREVGIPGEKL-EIGAYGPFHPVSSNDTPEGRAQNRRIQIVL 297 >gi|194099378|ref|YP_002002478.1| hypothetical protein NGK_1853 [Neisseria gonorrhoeae NCCP11945] gi|239999626|ref|ZP_04719550.1| hypothetical protein Ngon3_09112 [Neisseria gonorrhoeae 35/02] gi|240014801|ref|ZP_04721714.1| hypothetical protein NgonD_09194 [Neisseria gonorrhoeae DGI18] gi|240017250|ref|ZP_04723790.1| hypothetical protein NgonFA_08817 [Neisseria gonorrhoeae FA6140] gi|240081113|ref|ZP_04725656.1| hypothetical protein NgonF_07349 [Neisseria gonorrhoeae FA19] gi|240113325|ref|ZP_04727815.1| hypothetical protein NgonM_07083 [Neisseria gonorrhoeae MS11] gi|240116327|ref|ZP_04730389.1| hypothetical protein NgonPID1_08846 [Neisseria gonorrhoeae PID18] gi|240118614|ref|ZP_04732676.1| hypothetical protein NgonPID_09178 [Neisseria gonorrhoeae PID1] gi|240121324|ref|ZP_04734286.1| hypothetical protein NgonPI_06069 [Neisseria gonorrhoeae PID24-1] gi|240124157|ref|ZP_04737113.1| hypothetical protein NgonP_09504 [Neisseria gonorrhoeae PID332] gi|240126226|ref|ZP_04739112.1| hypothetical protein NgonSK_08443 [Neisseria gonorrhoeae SK-92-679] gi|240128827|ref|ZP_04741488.1| hypothetical protein NgonS_09423 [Neisseria gonorrhoeae SK-93-1035] gi|293398468|ref|ZP_06642646.1| hypothetical protein NGNG_01123 [Neisseria gonorrhoeae F62] gi|193934668|gb|ACF30492.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] gi|291610939|gb|EFF40036.1| hypothetical protein NGNG_01123 [Neisseria gonorrhoeae F62] gi|317164880|gb|ADV08421.1| hypothetical protein NGTW08_1460 [Neisseria gonorrhoeae TCDC-NG08107] Length = 225 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L + + + I + + + F S+ L + Sbjct: 76 YMDYQEQRLRQNLAGTQIEIQRQGNQIRLVMPESVT---FATGSAALGGSAQYALNTAAQ 132 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +I GHTD + N LS RA + L GV+ R+ + G+ Sbjct: 133 TLVQYPDTTLTINGHTDNT---GSDAVNNPLSQHRAQAVAYYLQTRGVAASRL-TVYGYG 188 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 H ++ + NRR++IL+ Q Sbjct: 189 SHMPVASNATVEGRAQNRRVEILINPDQ 216 >gi|300955691|ref|ZP_07168041.1| OmpA family protein [Escherichia coli MS 175-1] gi|2494512|sp|Q47154|MBHA_ECOLI RecName: Full=Putative protein mbhA gi|984586|dbj|BAA07592.1| MbhA [Escherichia coli W3110] gi|1552798|gb|AAB08650.1| MbhA [Escherichia coli] gi|300317442|gb|EFJ67226.1| OmpA family protein [Escherichia coli MS 175-1] Length = 211 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + E K +L K L +LA I++ + + E G+ + Sbjct: 4 PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 I D +N MF++ S+ +P +L ++ V I I GHTDA ++N +NW Sbjct: 61 LIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 LS DRA SA +VL ++G+ ED++ ++S A L + +P ++ NRRI+I+V + Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 175 >gi|222056198|ref|YP_002538560.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] gi|221565487|gb|ACM21459.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] Length = 349 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 8/205 (3%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 E + D + + + L + + + K++ ++ Sbjct: 129 AQEEAAKKVPELQAAVADREERISNLNATLRSLKSNLIQIRTDVVQLAKKRSGSEEKENA 188 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 ++ +L +++++ +Q +F S+ L+++ + Sbjct: 189 YAAFRRDFSDQIGKGEILVTEYPDKLIVTMPEQ---VLFRSGSATINKGGKKALERVASI 245 Query: 259 LAHSTEVI-SIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L I GHTD++P ++ NW LS RA S + L K G ++G+ Sbjct: 246 LKKVKNNRIRIEGHTDSTPIKSKHRYASNWDLSAARAASVVRHLQKKGAVNPEFLTLAGY 305 Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338 + A++ NRRI+I + Sbjct: 306 GPYAPAAANNTSRGRSLNRRIEIAL 330 >gi|262170812|ref|ZP_06038490.1| outer membrane protein A precursor [Vibrio mimicus MB-451] gi|261891888|gb|EEY37874.1| outer membrane protein A precursor [Vibrio mimicus MB-451] Length = 322 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +S+ P L K+ L + + + GHTD+ N +LS R Sbjct: 209 DSGTFANNSAELKPSMETKLDKLVGYLNQYPQAKVEVVGHTDS---NGSKAYNQKLSEKR 265 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + + L GV RI+ G ++ NRR+++++ Sbjct: 266 AQAVAKALEAQGVDAARITA-KGQGESNPIASNATAEGREKNRRVELVI 313 >gi|170700356|ref|ZP_02891367.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|170134743|gb|EDT03060.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] Length = 228 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 8/131 (6%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRG 270 + GI I I + +F + LP+ VL +I L+ T I + G Sbjct: 100 NGRISLVRASHGIEIGIDAK---ILFSVGDARLLPDATPVLSQIARALSEHATGDILVEG 156 Query: 271 HTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PM 327 HTD+ P N NW LS RA S + L GV+ R++ I G A + +A D P Sbjct: 157 HTDSVPIANAKYESNWELSSARAGSVVRYLADRGVAPHRLAAI-GRADTQPLVAGDDAPA 215 Query: 328 NSANRRIDILV 338 + NRR+ I V Sbjct: 216 RARNRRVTIFV 226 Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 16/29 (55%) Query: 27 PNNLGSWKIVYADFMTVLMAFFLVMWIIN 55 G W I YAD +T LM FL ++++ Sbjct: 24 GAQSGRWLISYADLITTLMVLFLALYVLQ 52 >gi|307131627|ref|YP_003883643.1| flagellar motor rotation protein motB [Dickeya dadantii 3937] gi|306529156|gb|ADM99086.1| Flagellar motor rotation protein motB [Dickeya dadantii 3937] Length = 376 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 85/216 (39%), Gaps = 4/216 (1%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 L+ + + S + + + + + + Sbjct: 50 PSQLAQIAEYFRTPLKIAITSGPKMSDASNPIPGGGSDPTQQEGDVKRQIDTMDGRLEEI 109 Query: 191 RLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +L L +++ + + +L E G+ I IID N PMF S+ P Sbjct: 110 KLNKLRERLDQLIEADPRLKALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMS 169 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSED 307 +L+ I +L IS+ GHTD + + NW LS DRA ++ + L+ G++E Sbjct: 170 DILRAIAPILNDIPNKISLSGHTDDAQYAMGERGYSNWELSADRANASRRELIIGGLAEG 229 Query: 308 RISKISGFAHHRLKIASDPM-NSANRRIDILVEDRQ 342 ++ ++ G A + ++ NRRI ++V ++Q Sbjct: 230 KVLRVVGMADTMNLKQAKGGSDAINRRISLVVLNKQ 265 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 34/107 (31%), Positives = 50/107 (46%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 Q II+KK ++ GSWKI YADFMT +MA FLVMW+I + I +YF Sbjct: 2 KHQHPIIRKKRKSGHAAHHGGSWKIAYADFMTAMMALFLVMWLIAISSPSQLAQIAEYFR 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 K +T+ + D NP + D +++D ++ Sbjct: 62 TPLKIAITSGPKMSDASNPIPGGGSDPTQQEGDVKRQIDTMDGRLEE 108 >gi|291286231|ref|YP_003503047.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290883391|gb|ADD67091.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 247 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 8/170 (4%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISII 229 E ++ + + + ++ + +K++ +L V + + V T+ G+ + I+ Sbjct: 61 EGNKTEMTQEDIMSRLSFVQNVRSVQRKVTKSLREYVKSAQMSQVVTIAETKKGVSVRIL 120 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLS 288 D+ +F S+ L + +L K+ V+ S I + GHTD P NW LS Sbjct: 121 DKM---LFKSGSAEILDQGKPLLDKLAAVIEESPFNIMVEGHTDDIPISTALYPSNWELS 177 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 RA S + M VS R+S SG+A + + S NRR+++ Sbjct: 178 TARAVSVVKYFMSKDVSAQRLSA-SGYAEYHPVTPNISAASREKNRRVEV 226 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 35/90 (38%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K ++ W ++D T+LM FF+++ + + D K L Sbjct: 3 KKKCEECKPGAPMWMSTFSDMATLLMTFFILLLSMASMDKRKIKVALGSLQGSLGVLKEG 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 +K +++ R S + S+ +TK+ Sbjct: 63 NKTEMTQEDIMSRLSFVQNVRSVQRKVTKS 92 >gi|332664040|ref|YP_004446828.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332332854|gb|AEE49955.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 651 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F+ +S+ E+ L + ++L + I I GHTD DN RLS R Sbjct: 546 RNVFFETASAALRQESGPELDHLADLLNQNPNLRIQINGHTDNV---GTDADNLRLSEQR 602 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 A + Y L+ G++ +R+ GF + ++ NRR + +V Sbjct: 603 AKAVYTYLVGKGIAAERL-AYKGFGETQPIADNNTEEGRKVNRRTEFVVL 651 >gi|258404712|ref|YP_003197454.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257796939|gb|ACV67876.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692] Length = 248 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 8/162 (4%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + LQ + + I + + L + + + R +++ + D +FD + Sbjct: 75 AQQNNLNESLQRVYQNIKNRIDNLEVN---ENIKLVKDRGAVVLRLNDSL---LFDSGET 128 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P +L+++ +++ + + GHTD P NW +S++RA S + L Sbjct: 129 ALKPRAAPLLREVAQLVRPLHLDMRVEGHTDNVPVSRPGISNWDISIERAVSVVKFLTSR 188 Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + +G+ R + +D + NRR+D +E + Sbjct: 189 DLLPPSRLSAAGYGDQRPLVRNDSPENRAKNRRVDFYLEQDE 230 >gi|110638407|ref|YP_678616.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110281088|gb|ABG59274.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 509 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 55/142 (38%), Gaps = 7/142 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S + L + + + + ++ + N FD S+ E+ + L ++ E++ Sbjct: 369 QSEVYDLEKAVAYETIKKDMVLEPLKLNASFRLNNLFFDFDSASLTKESELELDRVIEMM 428 Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + I HTD N +LS RA S + L G+ R+ G+ Sbjct: 429 KTNATMQVEISAHTDDM---GSDAYNQKLSQLRAESVVKYLTLHGIITTRLVA-KGYGES 484 Query: 319 RLKIASDPM--NSANRRIDILV 338 + +D + NRR++ + Sbjct: 485 VPSVPNDTEENRAKNRRVEFKI 506 >gi|4580969|gb|AAD24556.1|AF117964_1 OprF [Pseudomonas fuscovaginae] Length = 326 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + ++ P + ++ + + + + ++ GHTD+ N +LS RA + Sbjct: 221 FDFNKAVVKPNSYGDVKNLADFMKQYPQTTTVVSGHTDSV---GTDAYNQKLSQRRADAV 277 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 QVL+K G++ +RI + + R + NRR++ VE Sbjct: 278 KQVLVKDGIAPNRIQSVV-YGKTRPVADNATEAGRAINRRVEASVEA 323 >gi|15836945|ref|NP_297633.1| outer membrane protein [Xylella fastidiosa 9a5c] gi|9105169|gb|AAF83153.1|AE003886_12 outer membrane protein [Xylella fastidiosa 9a5c] Length = 389 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + + FD S P+ + VL++ E+L + + + GHTD++ A N Sbjct: 275 VPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPDLHVEVAGHTDST---GPAAYN 331 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 +LS RA Y L +G+ R+ G+ + + NRR ++ V++ Sbjct: 332 KKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKTPAGRAKNRRTELNVQN 389 >gi|311695446|gb|ADP98319.1| OmpA/MotB domain protein [marine bacterium HP15] Length = 218 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 51/144 (35%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I + + FD + S P L+ + Sbjct: 78 YMDKQEAELRRKLEGTGVRVVRNGDEIELVM---PGNITFDLNESSIKPSFSGTLESVAL 134 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL +I I GHTD+ N LS RA S L+ G+ R ++ G+ Sbjct: 135 VLKEYDKTIIQIEGHTDS---SGSDSYNQLLSERRASSVRDFLLNQGIEPKR-TRAVGYG 190 Query: 317 HHRLKIASDPMNSA--NRRIDILV 338 ++D NRR+++ + Sbjct: 191 ERYPVASNDTAAGREQNRRVELTL 214 >gi|257126222|ref|YP_003164336.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b] gi|257050161|gb|ACV39345.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b] Length = 225 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 6/156 (3%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSIPLPETI 249 ++++ +I++ DN V I I+ FD S P Sbjct: 35 QMRENTIRINALEIEEPGDNTVPAKKITCEDIMGPIQPIVFDEGALNFDFDKSYVKPYYN 94 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L + E L + I GHTD+ + N L + RA + L++ G+S RI Sbjct: 95 GLLGILKEFLNEKDYNVGITGHTDS---KGSDAYNMALGMRRAKAVKDRLIELGLSSSRI 151 Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 I ++ + NRRI+ V +R G Sbjct: 152 RGIDSKGESEPIATNETDEGRAQNRRIEFDVRNRDG 187 >gi|254302309|ref|ZP_04969667.1| OmpA family outer membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322501|gb|EDK87751.1| OmpA family outer membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 189 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 5/155 (3%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L L S + +K + + ++I+ FD S PE Sbjct: 23 PALAALTTTQMRENSIRINALELKNIDILNSEAPKEMTIVLDERALNFDFDKSNVKPEYY 82 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L+ I E + + I+I GHTD+ N++LS RA S L++ G++EDRI Sbjct: 83 DLLKNIKEFVEQNNYEITIVGHTDSI---GSNAYNFKLSRRRAESVKAKLLEFGLTEDRI 139 Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 I + ++ + NRR++ + R+ Sbjct: 140 VGIEAMGEEQPIATNETKEGRAQNRRVEFKLVQRE 174 >gi|188590401|ref|YP_001920214.1| chemotaxis protein MotB [Clostridium botulinum E3 str. Alaska E43] gi|251779316|ref|ZP_04822236.1| chemotaxis protein MotB [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188500682|gb|ACD53818.1| chemotaxis protein MotB [Clostridium botulinum E3 str. Alaska E43] gi|243083631|gb|EES49521.1| chemotaxis protein MotB [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 247 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 73/174 (41%), Gaps = 6/174 (3%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + +P + E + + + + +N+ + G+++ + D Sbjct: 73 DGKVPVIGGESDVDGVIDAQSLGKENMYKDIKNYVEKNNLSGSMDIIQDERGVILELKDS 132 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLD 290 +F+ + +P + VL K+ +++ + + GHTD P N NW LS Sbjct: 133 ---VLFESGQADLIPGSKEVLDKVDTLVSALPNSVIVEGHTDNVPISNYRYASNWELSTQ 189 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA + + +++ ++ +G+ +R + ++ + NRR++IL+ + + Sbjct: 190 RAVNVVKYFVETKSNDPMKFSAAGYGEYRPIVYNNSEENRAKNRRVNILIINEK 243 Score = 41.9 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 2/93 (2%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + ++K + D W Y+D +T+L+ FF++++ +++ D + K+I + F Sbjct: 1 MARRKKSDDGGGLKGDEWLGTYSDCVTLLLTFFILLYSMSSVDAEKLKSISEAFVSVMTG 60 Query: 76 LMTASKGIFDE--QNPPERSSQNKIDLSIDEHI 106 + S F+ P ++ +D ID Sbjct: 61 QSSDSFMEFNMYDGKVPVIGGESDVDGVIDAQS 93 >gi|332978756|gb|EGK15448.1| outer membrane porin OprF [Psychrobacter sp. 1501(2011)] Length = 304 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 86/279 (30%), Gaps = 15/279 (5%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 + P + + +D +++ + + + Sbjct: 35 WYPNKVVDVDTILNTPTPEGTTRLVFYRPMDEDDSRTGVNIAINDDYQVSLHPGSFTTVY 94 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + I S +S + K L IN +N + A Sbjct: 95 SCIGDNRLSNRSSELNTNDLLLKHKTSTLKDQETQYYEINVNKNRVAKSKRVSEDQARAA 154 Query: 189 KKRLQDLAKKISSTLSG--LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + + +IS + + + + I++ +FD S+ P Sbjct: 155 MAGMTYQSHQISKVIPNCAPRPQPKPQPISVPVLEEKVTINLQ-----VLFDNDKSVVKP 209 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304 + + L E + ++ + GHTD+ N LS RA++ +V + G+ Sbjct: 210 QYLRDLSTAAEFMQKYSDTTVVIEGHTDS---NASDAYNIALSKRRAHAVKEVFVNQYGI 266 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 S RI + G+ R ++ NRR+ +++ + Sbjct: 267 SPARIQAV-GYGESRPIASNATAEGRQMNRRVVAVIQQK 304 >gi|163787137|ref|ZP_02181584.1| outer membrane protein, OmpA family [Flavobacteriales bacterium ALC-1] gi|159877025|gb|EDP71082.1| outer membrane protein, OmpA family [Flavobacteriales bacterium ALC-1] Length = 319 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 17/217 (7%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL-- 195 E+ S+ +S+K ++L + ++ E+ L L KE KR L+++ Sbjct: 96 ALEENSSASIAANSKKNRELLAQLEAKEQALATESERLNTLKKELESRSKRVAELENVIA 155 Query: 196 -----AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + +S + + KG+ E + +S+ N +F S E Sbjct: 156 AKDANMRALKDAISKALTNFEGKGLTVEQRDGKVYVSM---ENKLLFQSGSWSVGTEGRK 212 Query: 251 VLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKS-GVSE 306 +Q++G VLA + E+ I GHTD P++ A NW LS RA + +L ++ +S Sbjct: 213 AVQQLGSVLAENPEISVLIEGHTDNVPYKGNAQLSGNWDLSAKRATAIVNILRENSAISP 272 Query: 307 DRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 + ++ G + + NRRI++++ + Sbjct: 273 ENLTAA-GRGEFAPIATNSTAEGKAKNRRIEVVLTPK 308 >gi|325982116|ref|YP_004294518.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212] gi|325531635|gb|ADZ26356.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212] Length = 237 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 7/162 (4%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIP 244 + L +K+ T+S + +T +I I+ + F I Sbjct: 75 QDDEHTILTEKVEKTISQDENPPAATEEIIDTVPPLDVIDRPRILAIFDGKTFRSGQDII 134 Query: 245 LPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + V+ + + ++ S I GHTD P I+ DN LS RA + VL+ G Sbjct: 135 HDVSHSVIDNLIKEISASPNSRILIEGHTDNIPTGKISSDNMDLSRRRARAIANVLILHG 194 Query: 304 VSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQG 343 V RI I G+ R +++ D + NRR+++ + +G Sbjct: 195 VPATRI-SIIGYGDKRPIVSNATDEGRAKNRRVEVKLMPPEG 235 >gi|114707989|ref|ZP_01440881.1| OmpA family protein [Fulvimarina pelagi HTCC2506] gi|114536618|gb|EAU39750.1| OmpA family protein [Fulvimarina pelagi HTCC2506] Length = 221 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + L GV I++++ F S LP L + Sbjct: 79 YMDNQEAQLRQQLQGTGVSVTRVGDRIILNMPSNVT---FPSDQSQILPGFYPTLDSVAI 135 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL E I ++ GHTD+ N LS RA S Q L GV+ +R++ G+ Sbjct: 136 VLQKFDETIVNVYGHTDSQ---GGDGYNLSLSQQRASSVSQFLASRGVNPNRLNT-QGYG 191 Query: 317 HHRLKIASDPM--NSANRRIDILV 338 + + + NRR+++ + Sbjct: 192 ESQPIADNSTEAGRARNRRVEVQI 215 >gi|256822902|ref|YP_003146865.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069] gi|256796441|gb|ACV27097.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069] Length = 221 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 56/195 (28%), Gaps = 10/195 (5%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 E+ +I + A+ + + S L + Sbjct: 32 GEEQTSKTVKYGAIGAITCGLIGATRDSKSARNAALGCGAIGAGIGAYMDSQEKELREEL 91 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269 GV + I + + F VL + +VL + + Sbjct: 92 AGTGVGVQRDGEQIHLIMPGDIT---FQTDRYAIDSGFYPVLDSVSKVLYKFKDTNLEVA 148 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 G TD+ N LS RA S L + + +R+ ++ G+ ++ Sbjct: 149 GFTDSV---GSDSYNQELSEKRANSVASYLRQREIPNNRL-RVVGYGERYPVAPNETEAG 204 Query: 330 A--NRRIDILVEDRQ 342 NRR+++ + Sbjct: 205 RSKNRRVELTITPDP 219 >gi|310764847|gb|ADP09797.1| chemotaxis protein (motility protein B) [Erwinia sp. Ejp617] Length = 302 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 77/202 (38%), Gaps = 3/202 (1%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 K + + +K+ K + L+ + ++ + Sbjct: 64 PIKPTMGQGNKTSFSESVIPGGGDDVIRQEGEVFKHQVDKLDKFKNVESLKKVKTRLEAM 123 Query: 203 LS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + N +L T G++I I D + PMF S P +LQ + +L Sbjct: 124 IESDPRLSNFKSNLLLTLTDDGLVIQITDSQERPMFKTGSESPESYMKGILQALVPLLKE 183 Query: 262 STEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 +S+ GHTD+ + + NW LS RA +A +VL+ +G+ +D I ++ G Sbjct: 184 LPNSLSLTGHTDSLAYAGGSGGYSNWELSTGRANAARRVLVNAGLDDDHILRVIGTGSRM 243 Query: 320 LKIASDPMNSANRRIDILVEDR 341 N NRRI +L+ + Sbjct: 244 GLTDISADNPMNRRISVLILSK 265 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 44/90 (48%) Query: 14 FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 II ++K ++ G+WKI YADFMT +MAFFLVMW++ ++ D ++ I YF Sbjct: 6 PIIRQRKRKHKKHAHHGGTWKIAYADFMTAMMAFFLVMWLLASSSDMQREMIADYFRMPI 65 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSID 103 K M ++ + I + Sbjct: 66 KPTMGQGNKTSFSESVIPGGGDDVIRQEGE 95 >gi|262042941|ref|ZP_06016085.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039658|gb|EEW40785.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 568 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 6/120 (5%) Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI 280 + ++I + +FD + P + L + I + GHTD+ Sbjct: 424 QRVAPNVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSV---GE 480 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + N LSL RA S + +G D + G+ R + + NRR++I + Sbjct: 481 EKANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNGTPEGRALNRRVEISL 540 >gi|19704459|ref|NP_604021.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714725|gb|AAL95320.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 315 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 84/272 (30%), Gaps = 10/272 (3%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + + DE +R+ + VD + ++ + Sbjct: 46 TVQTDGKGAGQYTDENITIQRNEDGSGQYTNKVTGVTLQVDTQGEGQYLDEKNKISFQIG 105 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + E+ ++T + +E + + Y K K Sbjct: 106 ADGTGVYKDENNDTTITIGENNSTYTKGNITIENNGDGSGTYNDKEKELLIENDGKGKAI 165 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETI 249 + K I L + I + +I + +FD PE Sbjct: 166 ITLKGKTIEVEAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDVRPEAE 225 Query: 250 VVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 VL+ + VL + + I GHTD+ N LS +RA + L G+ + Sbjct: 226 EVLKNLVIVLKEADIKAFEIDGHTDSD---ASDEHNQVLSENRANAVKNFLTSQGIMAE- 281 Query: 309 ISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 I G+ R ++D NRR++I++ Sbjct: 282 -ITIKGYGESRPIASNDTPEGKQKNRRVEIVI 312 >gi|237740687|ref|ZP_04571168.1| outer membrane protein [Fusobacterium sp. 2_1_31] gi|229422704|gb|EEO37751.1| outer membrane protein [Fusobacterium sp. 2_1_31] Length = 212 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 10/149 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L A +++++ F S+ L + Sbjct: 71 AYKDNQARELRAALKGTQAEVRNDGNALVVNL---PGGVTFASDSANISSGFYSALNGVA 127 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + L E I + G+TD++ N LS RA S Q L+ GVS RI +GF Sbjct: 128 QTLVRYPETRIQVNGYTDST---GGDAHNQELSQRRANSVAQYLISQGVSSSRIVA-NGF 183 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342 ++ NRR+++ + Q Sbjct: 184 GSSNPIASNATPEGRQANRRVEVRILPAQ 212 >gi|254487455|ref|ZP_05100660.1| OmpA family domain protein [Roseobacter sp. GAI101] gi|214044324|gb|EEB84962.1| OmpA family domain protein [Roseobacter sp. GAI101] Length = 221 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 10/141 (7%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + + V+ T +++++ +F S+ L + + Sbjct: 85 QQEADLRRQLDSNVIITNTGDRLIVTLPQD---ILFATDSTTVQSGMQSDLAALARNVNV 141 Query: 262 STEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + GHTD+ A N +LS RA + VL+ +GV +RI + G + Sbjct: 142 YSNSTLQVIGHTDSV---GDASYNQQLSEGRANAVANVLIGNGVPRNRIQAV-GRGESQP 197 Query: 321 KIA--SDPMNSANRRIDILVE 339 + + + NRR++I++ Sbjct: 198 VASNLNASGKAQNRRVEIVIL 218 >gi|330953776|gb|EGH54036.1| flagellar motor protein MotD [Pseudomonas syringae Cit 7] Length = 295 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 64/193 (33%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 57 NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + +F ++P + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELNSSM---LFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327 TD P NW LS R+ S ++L GV+ R++ + G+ + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIAPNTSTVG 232 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 RAKNRRVVLVISR 245 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 73/236 (30%), Gaps = 10/236 (4%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +++ + + W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 1 MARRRQVEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 K P Q + + E + K+S G + + Sbjct: 59 TERTMK-------PIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDA 111 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + ++ + + S+ L S + + + ++ +KR + Sbjct: 112 FGDLIKSDQMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHV 171 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK-SSSIPLPETIV 250 + + + + + +D N P Sbjct: 172 EGFTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIAPN 227 >gi|229132541|ref|ZP_04261390.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196] gi|228650887|gb|EEL06873.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196] Length = 225 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 4 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDAEQVDAKVMEGTI 63 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + ++ L V +N V V TG+ I I+D +FD Sbjct: 64 PDISHEKNDEKAVSKKRMDELYKKLKAYVDNNGVSQVNVYREDTGVSIVIVDNL---IFD 120 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297 + PE V+ ++ I + GHTD+ P N NW LS RA + Sbjct: 121 TGDANVKPEAKEVISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 180 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + ++D NRR+ I +++ Sbjct: 181 HLIEVYNVDDKRLAAV-GYADTKPVESNDSPQNWEKNRRVVIYIKE 225 >gi|213963523|ref|ZP_03391776.1| inner membrane lipoprotein YiaD [Capnocytophaga sputigena Capno] gi|213953803|gb|EEB65132.1| inner membrane lipoprotein YiaD [Capnocytophaga sputigena Capno] Length = 229 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 52/142 (36%), Gaps = 7/142 (4%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + G + GI+++ + FD + ++ L K+ +L Sbjct: 80 QAKKIEEEIPGADVKRVDDGIVVTFDENNGGVYFDTNKYNINEKSKQTLDKLAAILKEYP 139 Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GHTD+ N LS RA + G++ R + + Sbjct: 140 DTNVLVAGHTDSV---GKDEYNLGLSQRRAQAVTNYFKSKGLAGSRFTT-KWYGEKNPIA 195 Query: 323 ASDPM--NSANRRIDILVEDRQ 342 ++D + NRR+++++ + Sbjct: 196 SNDTAEGRAKNRRVNVVIVPNE 217 >gi|162449773|ref|YP_001612140.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] gi|161160355|emb|CAN91660.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 601 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 67/270 (24%), Gaps = 10/270 (3%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 T +KG ++ D D V + +++ Sbjct: 322 TGTKGARGAAPAAPPAADFDGDSVPDAEDACPRVIGEARPPAAAAGARQVFRRGCPPDRD 381 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + + D + + + Sbjct: 382 DDGIYDVDDRCPDVPGVSSAAADAGPGGAGSGITAETAANAGSQPASRHGCPADTDGDGI 441 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKI 255 ++ + + I F + PE+ +L ++ Sbjct: 442 PNAADACPYERGKPSEDRATHGCPFAVRIEGSQIVILQQVQFRTGRAEIEPESFELLSEV 501 Query: 256 GEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 VL E+ + GHTD A+ N LS RA + L G+ R+ Sbjct: 502 AAVLEEHPEIARVAVDGHTDNQ---GAAQANLSLSQRRALAVVAWLTAHGIDARRLEA-R 557 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVEDR 341 GF R + + NRR++ + R Sbjct: 558 GFGARRPLADNRTRDGRAKNRRVEFQIRKR 587 >gi|59801892|ref|YP_208604.1| hypothetical protein NGO1559 [Neisseria gonorrhoeae FA 1090] gi|260439855|ref|ZP_05793671.1| hypothetical protein NgonDG_01984 [Neisseria gonorrhoeae DGI2] gi|291043130|ref|ZP_06568853.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|59718787|gb|AAW90192.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|291012736|gb|EFE04719.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|307075938|emb|CBE70801.1| outer membrane protein A [Neisseria gonorrhoeae] Length = 225 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L + + + I + + + F S+ L + Sbjct: 76 YMDYQEQRLRQNLAGTQIEIQRQGNQIRLVMPESVT---FATGSAALGGSAQYALNTAAQ 132 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +I GHTD + N LS RA + L GV+ R+ + G+ Sbjct: 133 TLVQYPDTTLTINGHTDNT---GSDAVNNPLSQHRAQAVAYYLQTRGVAASRL-TVYGYG 188 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 H ++ + NRR++IL+ Q Sbjct: 189 SHMPVASNATVEGRAQNRRVEILINPDQ 216 >gi|28199584|ref|NP_779898.1| outer membrane protein [Xylella fastidiosa Temecula1] gi|28057699|gb|AAO29547.1| outer membrane protein [Xylella fastidiosa Temecula1] Length = 389 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + + FD S P+ + VL++ E+L + + + GHTD++ A N Sbjct: 275 VPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPDLHVEVAGHTDST---GPAAYN 331 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 +LS RA Y L +G+ R+ G+ + + NRR ++ V++ Sbjct: 332 KKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKTPAGRAKNRRTELNVQN 389 >gi|302875899|ref|YP_003844532.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans 743B] gi|307689333|ref|ZP_07631779.1| chemotaxis MotB protein [Clostridium cellulovorans 743B] gi|302578756|gb|ADL52768.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B] Length = 245 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 11/154 (7%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 ++ +L K+ ++ + V+ E + G+ ISI D +F+ + L E Sbjct: 99 KMHELKAKLDQEIA---REGYSDKVITELNKDGLYISIQD---VILFNSGDANVLKEVSP 152 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG-VSEDR 308 +L +I ++ I I GHTD P R NW LS RA + ++ +G ++ ++ Sbjct: 153 LLTEISHLIRDIDNRIRIVGHTDNVPISTVKFRSNWDLSAMRAINVMNFMVDTGKLNPEK 212 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + I + + + + + NRR++I + Sbjct: 213 V-SIQAYGEYMPRFDNSTAENRARNRRVEIFIIR 245 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 K + +W I YAD +T+L+A F+VM+ ++ D+ + Q N Sbjct: 3 KKKQHHEEHVDETWLIPYADMLTLLLALFIVMFAMSKLDNQKVSQVSQQLNAIFA 57 >gi|78189119|ref|YP_379457.1| OmpA family protein [Chlorobium chlorochromatii CaD3] gi|78171318|gb|ABB28414.1| OmpA family protein [Chlorobium chlorochromatii CaD3] Length = 233 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 10/138 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 D V+G + I + + +F SS + ++++ +L Sbjct: 86 QAAAIDQNVEGAQVQRVGESIRVVF---DSGLLFTTGSSTISAASRSNIEQLARILNTYG 142 Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GHTD+ N LS RA S +L GV+ +R+S + G+ R Sbjct: 143 DTNVVIEGHTDSI---GNEATNQVLSEKRAESVATLLKVYGVAPNRMSAV-GYGETRPVA 198 Query: 323 ASDPMNSA--NRRIDILV 338 ++ NRR+++L+ Sbjct: 199 TNETEAGRNLNRRVEVLI 216 >gi|328470939|gb|EGF41850.1| outer membrane protein OmpA [Vibrio parahaemolyticus 10329] Length = 329 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 ++ T F+ S+ L L + + I G+TD+ A N +LS Sbjct: 211 EEYGTGTFEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 267 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + + +G+ DR+ + G + NRR++++V Sbjct: 268 ERRAQAVADYITSAGIDADRL-TVKGMGEENPVADNSTREGREKNRRVEVVV 318 >gi|118443271|ref|YP_877986.1| chemotaxis motB protein [Clostridium novyi NT] gi|118133727|gb|ABK60771.1| chemotaxis motB protein [Clostridium novyi NT] Length = 241 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 8/163 (4%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 K D + S +N+ V + GI++ + + +FD + Sbjct: 80 PEEMGSKVANDNEEMYSKVKDFTSKNNLDSTVQVKKDARGIILELKEN---ILFDSGQAD 136 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL-MK 301 + +L KI ++ I I GHTD P N NW LS RA + + + Sbjct: 137 LKLSSKEILDKISALIESVPNGIIIEGHTDNVPIHNSKYDSNWELSTQRAVNVLKYFVVS 196 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G ++ G+ + +D + NRR++IL+ + Sbjct: 197 KGEKPEKFQAA-GYGEYHPIAKNDNYVDRAKNRRVNILIVGEK 238 Score = 43.4 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 30/83 (36%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ I + W YAD +T+L+ FF++++ + D K + F + Sbjct: 3 RRKKIQQSEGGGEEWLQTYADTITLLLTFFVLLYASSNLDVVKFKQMSSSFQNVFSGNNS 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLS 101 S F+ + S Sbjct: 63 NSILDFNASGEAPIVGPPEEMGS 85 >gi|146298593|ref|YP_001193184.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146153011|gb|ABQ03865.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 314 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 118/299 (39%), Gaps = 11/299 (3%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 LV+ ++AT +KK I +L ++ I DE +++ Sbjct: 9 LVVLALSATSCVSKK-IYNDLETKYSDLKKENRSIADENADLKKAKNQLELDRDKLTKDL 67 Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 S + ++ + + S + ++ ++L ++ K ++L + + Sbjct: 68 ASTKDDLAKQKADLAAEQKKYKVLQDSYNALEKNSNDALEKNMAKNRELLAQLEAKGKAL 127 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 +E L + ++ +K+ TLS + KG+ E + +S+ Sbjct: 128 ADEQARLDKTASRLKELEDMIAAKEEAMRKLKETLSKALTGFEGKGLTVEHKNGKVYVSM 187 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA--RDNW 285 N +F+ S E + ++G+VL + + + I GHTD P+ +NW Sbjct: 188 ---ENKLLFNSGSWAVGTEGRRAVVELGKVLGDNPDLSVLIEGHTDDDPYAGSGPIANNW 244 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 LS RA + +L ++ +++ +++ G + ++ + NRRI+I++ R Sbjct: 245 DLSTKRATAIVAILSENPKINKQKLTAA-GRSEFSPLASNATPEGKAKNRRIEIILTPR 302 >gi|159045565|ref|YP_001534359.1| OmpA/MotB domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157913325|gb|ABV94758.1| OmpA/MotB domain protein [Dinoroseobacter shibae DFL 12] Length = 208 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 10/169 (5%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 K I A+ + + L A+ V T + +++++ Sbjct: 47 EDREKALIGAVVGAGVGAAIGDMLDRQARDLQAELGNDAVQIVNTGSELVVTMPQD---I 103 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S++ L + L + + GHTD + A N LS RA + Sbjct: 104 LFAVDSAVVQSTLQSDLAALSRNLLDYPDTTVQVVGHTDNT---GSAGYNQELSQRRASA 160 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 +L+++GV R+ G + ++ + + NRR++I++ R Sbjct: 161 VAAILLQNGVPSSRVVAF-GRGEDQPIASNLDEAGRAQNRRVEIIITPR 208 >gi|255067217|ref|ZP_05319072.1| OmpA family protein [Neisseria sicca ATCC 29256] gi|255048585|gb|EET44049.1| OmpA family protein [Neisseria sicca ATCC 29256] Length = 261 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 52/148 (35%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L + + E I + + + F S+ + L E Sbjct: 111 YMDYQEKKLRENLKNTNIEVERQGNQIKLVMPENVT---FATGSAALSDQARNALATASE 167 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +I GHTD + N LS +RA + L GV+ R++ G+ Sbjct: 168 TLVQYPDTTLTINGHTDNT---GNDAINEPLSRNRALAVADYLQSRGVNGSRLTTA-GYG 223 Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342 ++ + NRR++IL+ Q Sbjct: 224 SRHPIASNATAEGRAQNRRVEILINPDQ 251 >gi|269121368|ref|YP_003309545.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386] gi|268615246|gb|ACZ09614.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386] Length = 215 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 7/113 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F +SS L I VL + I++ GHTD++ N LS++ Sbjct: 107 PENVTFATNSSTISSRFTNTLDSIASVLKEYPDSNITVSGHTDST---GNDAINNPLSVN 163 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA S L + G++ RI+ + G+ + ++ + NRR++I + + Sbjct: 164 RANSVANYLKQEGIASSRITAV-GYGSKQPVASNSTSDGRAQNRRVEIKITAK 215 >gi|187933571|ref|YP_001885053.1| chemotaxis protein MotB [Clostridium botulinum B str. Eklund 17B] gi|187721724|gb|ACD22945.1| chemotaxis protein MotB [Clostridium botulinum B str. Eklund 17B] Length = 247 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 70/174 (40%), Gaps = 6/174 (3%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + +P + E + +N+ + G+++ + D Sbjct: 73 DGKVPIIGGESDTEGVIDAESLGKESMYKDVKDYVEKNNLSGAMDIVQDERGVILELKDS 132 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLD 290 +F+ + +P + VL K+ +++ + + GHTD P N NW LS Sbjct: 133 ---VLFESGQADLIPGSKEVLDKVDTLISALPNSVIVEGHTDNVPISNYKYASNWELSTQ 189 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 RA + + +++ ++ +G+ +R + ++ + NRR++IL+ + + Sbjct: 190 RAVNVVKYFVETKSNDPMKFSAAGYGEYRPIVYNNSEENKAKNRRVNILIINEK 243 Score = 41.9 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 4/136 (2%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +KK + D W Y+D +T+L+ FF++++ ++ D ++I Q F + Sbjct: 1 MARKKKSDDGGGLRGDEWLATYSDCVTLLLTFFILLYSMSTVDAQKVQSISQAF----VS 56 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 +MT G + I D ++ L S + + +NN+ Sbjct: 57 VMTGQSGDTFLKYNQYDGKVPIIGGESDTEGVIDAESLGKESMYKDVKDYVEKNNLSGAM 116 Query: 136 NSQQSEHCKNSLTRDS 151 + Q E +DS Sbjct: 117 DIVQDERGVILELKDS 132 >gi|94268092|ref|ZP_01291083.1| OmpA/MotB [delta proteobacterium MLMS-1] gi|93451732|gb|EAT02500.1| OmpA/MotB [delta proteobacterium MLMS-1] Length = 240 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + P ++ +L+++ E+LA + I GH+D P + NW LS RA + Sbjct: 128 FASGRAEPREPSLPILERLAELLAGKPAYRVIIAGHSDDLPISSERYPSNWYLSSARAVA 187 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L + GV R++ G A + ++A+D + NRR++I + + Sbjct: 188 VAEYLQQQGVDPGRLTT-QGHAEFKPRVANDSPQNRAKNRRVEITLLRDE 236 >gi|329847657|ref|ZP_08262685.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19] gi|328842720|gb|EGF92289.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19] Length = 208 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L ++ + V + I++S+ F S+ + VL + Sbjct: 67 YMDRQNKDLRSELEGRNVYVTRSGDNIILSMPGDVT---FSSGSADLNGGFMPVLNDVAT 123 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 +L I + GH D+ N LS RA + L+ V +RI ++G Sbjct: 124 ILNQYPSTYIDVVGHADSQ---GTDAFNMDLSERRANAVAGYLVGQKVKSERIY-VAGAG 179 Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342 ++D + NRR++I + Q Sbjct: 180 ESSPIASNDTADGRARNRRVEITLRPIQ 207 >gi|258593360|emb|CBE69699.1| OmpA/MotB precursor [NC10 bacterium 'Dutch sediment'] Length = 249 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ E++ +L + E+L+ + ++I GHTD+ A N +LS RA S Sbjct: 147 FAFNSAELTTESLTILDGVAEILSKHPDLKVTIAGHTDSV---GTADYNKKLSQRRAESV 203 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L GV+ +++ + GF + ++D NRR+++ Sbjct: 204 RNYLASHGVNAAKLTAV-GFGEEQPIASNDEAEGRTKNRRVEL 245 >gi|332557731|ref|ZP_08412053.1| hypothetical protein RSWS8N_01730 [Rhodobacter sphaeroides WS8N] gi|332275443|gb|EGJ20758.1| hypothetical protein RSWS8N_01730 [Rhodobacter sphaeroides WS8N] Length = 525 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 96/297 (32%), Gaps = 16/297 (5%) Query: 58 DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 + A+ + + + R+ + + +++ + G Sbjct: 232 SETELTAMTLALEEQRRKAEETLTLLAAAKTDAARAVSEADQRAAALAAAREALNTREGE 291 Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + + L N +Q +++ + + L +N Sbjct: 292 GAEAARRVALLNEQVAALRAQLGSLQGLLEAAEAQDAANKVQLQSLGTQLNSALAQVASE 351 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + L + RL+ K ++ S + VL ++ + +F Sbjct: 352 QKRRAELEEAERLRLEAENKDLARFRSEFFGQL--RQVLAGREGVRVVGDRFVFSSEVLF 409 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRN--IARDNWRL 287 + S+ PE + + + L +I + GHTD P RDNW L Sbjct: 410 EPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFGAFRDNWEL 469 Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 S RA S + + +S G R+ +GF +R D + NRRI++ + +R Sbjct: 470 SSARALSVVRFMQQSLGFPPSRL-AATGFGEYRPVTPGDSPDARAQNRRIELKLTER 525 >gi|257459102|ref|ZP_05624221.1| outer membrane fibronectin-binding protein [Campylobacter gracilis RM3268] gi|257443487|gb|EEV18611.1| outer membrane fibronectin-binding protein [Campylobacter gracilis RM3268] Length = 340 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 10/124 (8%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273 V+ + +I + N F SS PE + ++ + +VL + I GHTD Sbjct: 219 VVVDEYGCEKVIRLNLGVN---FATDSSKISPEFMNQIKNVSDVLVAHPDYKVILEGHTD 275 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331 ++ N +LS RA + L GV RI+ + G+ + + + N Sbjct: 276 ST---GSNAYNQKLSERRAAAVGGALKSFGVDASRITTV-GYGETKPIATNATKAGRAQN 331 Query: 332 RRID 335 RR+D Sbjct: 332 RRVD 335 >gi|223039024|ref|ZP_03609315.1| outer membrane fibronectin-binding protein [Campylobacter rectus RM3267] gi|222879663|gb|EEF14753.1| outer membrane fibronectin-binding protein [Campylobacter rectus RM3267] Length = 293 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 11/170 (6%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 P +++ + L D + + + V+ + T +I + Sbjct: 127 GFGAKNAPVVAESPKMQEPAVVSLDDDNDGVLNDVDQCPNTPAG--VVVDETGCEKVIFL 184 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRL 287 D F S P+ + ++K+ + + + GHTD+ N +L Sbjct: 185 RDLDVN--FAFDSYKITPKYLEEIKKVAMFMGENPGYRIVLSGHTDSV---GTEAYNQKL 239 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 S RA + + L + GVS D+I+ I G+ + + + NRR++ Sbjct: 240 SEKRANAVAKALEELGVSADKITAI-GYGELKPIATNKTKEGRAENRRVE 288 >gi|254492090|ref|ZP_05105265.1| hypothetical protein MDMS009_2433 [Methylophaga thiooxidans DMS010] gi|224462642|gb|EEF78916.1| hypothetical protein MDMS009_2433 [Methylophaga thiooxydans DMS010] Length = 224 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 67/206 (32%), Gaps = 9/206 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + C + K + ++ ++ + A+ + + Sbjct: 11 ATALSGCAANDPNQKTKAGAAIGAAAGALVGYAVDDGAGGVIAGAAVGALAGGGVGRYMD 70 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + + + L ID N FD S+ L K+ Sbjct: 71 NQQKEMEAALAEEQARHELEIQQLENETLK--IDIANEVSFDFDSAALKSAFTPTLSKVA 128 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +VL +I + GHTD+ N RLS RA S GV+ R+ I G Sbjct: 129 DVLQRYPNTIIHVVGHTDSV---GSESYNQRLSERRAQSVVDYFSSRGVATGRLYAI-GR 184 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 + ++ NRR++I V+ Sbjct: 185 GETEPRATNETEAGRQLNRRVEIFVK 210 >gi|156936614|ref|YP_001440528.1| hypothetical protein ESA_pESA3p05495 [Cronobacter sakazakii ATCC BAA-894] gi|156534868|gb|ABU79692.1| hypothetical protein ESA_pESA3p05495 [Cronobacter sakazakii ATCC BAA-894] Length = 567 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 9/151 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + L + + +S A V I + +FD + Sbjct: 398 QGEKLIPPLDAAISDWSAPVSSPPVNKNIITEPQTIRL---DALSLFDTGQWRLKTGSTK 454 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 VL + I + GHTD R N +LSL RA + + +G + Sbjct: 455 VLVNALVGIKARPGWLIVVAGHTDDV---GDERANQQLSLKRAEAVRDWMRGTGDVPESC 511 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + G+ R + + NRR++I + Sbjct: 512 FAVQGYGESRPAVPNTTAEGRALNRRVEISL 542 >gi|292492509|ref|YP_003527948.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4] gi|291581104|gb|ADE15561.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4] Length = 243 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 12/151 (7%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + D +++ + L+ + ++ + + D + FD S+ + Sbjct: 82 MNDQQREMEAALAEERRRHQLEIQRLQDESLKL-----DIPSEVSFDHDSASLKQAFLPT 136 Query: 252 LQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L KI +VL V+ + GHTD++ N LS+ RA + L + GV R+ Sbjct: 137 LDKIADVLKKYNKTVVHVIGHTDST---GSEEYNLDLSVRRAANVAVYLEQKGVPSPRL- 192 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVE 339 I G + + ++D NRR++I+++ Sbjct: 193 SIYGEGESQPRASNDTAAGRQLNRRVEIILK 223 >gi|257875985|ref|ZP_05655638.1| flagellar motor protein MotB [Enterococcus casseliflavus EC20] gi|257810151|gb|EEV38971.1| flagellar motor protein MotB [Enterococcus casseliflavus EC20] Length = 254 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 8/182 (4%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + ++ + A++ + Q L K L A + + G+ Sbjct: 73 ETTPRKKAATSAEAQAQEAAVRTQLENQQLEKISDQLSQELAASGLKEQTEVRLESDGLH 132 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRN--IAR 282 I++ ++ +F S+ T L + + L I I GHTD P + + Sbjct: 133 ITL---ASSILFASGSAEITDTTRQSLDLLSDSLKKLKANKIVIAGHTDNVPEKGNGRYQ 189 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 NW LS RA + + + G ++ + I FA K ++ S NRR++++++ Sbjct: 190 SNWDLSSARAITVMEYFISKGAVLEKNAAIQAFADTEPKADNNTPQGRSENRRVEMIIQR 249 Query: 341 RQ 342 + Sbjct: 250 TE 251 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 53/122 (43%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W + Y+D +T+L+A F+VM+ + DD+ + I+ F + + Sbjct: 2 KRKKKHEEHVDEAWLLPYSDMLTLLLALFIVMFAMAKVDDEKFQEIKSEFGTILSSHHSN 61 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S I + E + + K S + + +V ++ + +K +L + +Q Sbjct: 62 SSVIGSVIDMGETTPRKKAATSAEAQAQEAAVRTQLENQQLEKISDQLSQELAASGLKEQ 121 Query: 140 SE 141 +E Sbjct: 122 TE 123 >gi|115360213|ref|YP_777351.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD] gi|115285501|gb|ABI91017.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 228 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 8/179 (4%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + + L++ A ++ + L+ L A + G Sbjct: 52 QLAKYNALDARYQTLARHDGGASSVMAAAPATPERAPAWLTSLDALKTNGRISLVRAPHG 111 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-A 281 I I I + +F+ + LP+ VL +I L+ T I + GHTD++P N Sbjct: 112 IEIGIDAK---ILFNVGDARLLPDATPVLSEIARALSEHATGDILVEGHTDSAPIANAKY 168 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 NW LS RA S + L + GV+ R++ I G A + +A D P + NRR+ I V Sbjct: 169 ESNWELSSARAGSVVRYLAERGVAPHRLAAI-GRADTQPLVAGDDAPARARNRRVTIFV 226 Score = 46.9 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 G W I YAD +T LM FL ++++ A++ + ++ AS + Sbjct: 27 SGRWLISYADLITTLMVLFLALYVLQ---LAKYNALDARYQTLARHDGGASSVMAAAPAT 83 Query: 90 PERSS 94 PER+ Sbjct: 84 PERAP 88 >gi|255533363|ref|YP_003093735.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366] gi|255346347|gb|ACU05673.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366] Length = 282 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 9/154 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 L +++ L+ ++ ++ V + + + IS+ D ++ S LP+ L Sbjct: 116 DSLNMVLTNNLTRSLSREELRDVDVQVLKGVVYISLSDNM---LYKSGSYEILPKAGETL 172 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRI 309 KI +++ + I G+TD P R+NW LS RA S Q L GV R+ Sbjct: 173 SKIAKIIKDYRDYDVLIEGNTDNVPISMVNIRNNWDLSALRASSVVQALQNTYGVDPKRL 232 Query: 310 SKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 + G + A+D + NRR I++ + Sbjct: 233 TAG-GRGEYNPLAANDTEAGKAKNRRTQIIITPK 265 >gi|149913202|ref|ZP_01901736.1| OmpA family domain protein [Roseobacter sp. AzwK-3b] gi|149813608|gb|EDM73434.1| OmpA family domain protein [Roseobacter sp. AzwK-3b] Length = 222 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 56/146 (38%), Gaps = 10/146 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L V T +++++ +FD S+ L + Sbjct: 80 NMLDRQEAQLRQQLDDDRVQITNTGDRLIVTLPQD---ILFDVDSASVRSGLRDDLMTVA 136 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L + + + GHTD + A N +LS RA + VLM GV+ RI G Sbjct: 137 SSLRDYPDSTVQVVGHTDNT---GDAGYNQQLSERRANAVADVLMDGGVAFSRIQTF-GR 192 Query: 316 AHHRLKIAS--DPMNSANRRIDILVE 339 ++ + D + NRR++I++ Sbjct: 193 GENQPVADNLTDAGRAQNRRVEIVIL 218 >gi|256846747|ref|ZP_05552203.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2] gi|256717967|gb|EEU31524.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2] Length = 190 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 5/154 (3%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +Q L S + +K V + ++I+ + FD S P+ Sbjct: 25 AVQALTTTQMRENSIRINALELKNVDILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYD 84 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L+ I E + + I+I GHTD+ N++LS RA S L++ G+SEDRI Sbjct: 85 LLKNIKEFVEQNNYEITIVGHTDSI---GSNAYNFKLSRRRAESVKAKLLEFGLSEDRIV 141 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 I + + + NRR++ + R+ Sbjct: 142 GIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 175 >gi|259907647|ref|YP_002648003.1| Outer membrane protein, OmpA/MotB [Erwinia pyrifoliae Ep1/96] gi|224963269|emb|CAX54753.1| Outer membrane protein, OmpA/MotB [Erwinia pyrifoliae Ep1/96] gi|283477490|emb|CAY73406.1| Chemotaxis protein motB (Motility protein B) [Erwinia pyrifoliae DSM 12163] Length = 302 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 76/202 (37%), Gaps = 3/202 (1%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 K + + +K+ K + L+ + + + Sbjct: 64 PIKPTMGQGNKTSFSESVIPGGGDDVIRQEGEVSKYQVDKLDKFKNVESLKKVKTHLEAM 123 Query: 203 LS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + N +L T G++I I D + PMF S P +LQ + +L Sbjct: 124 IESDPRLSNFKSNLLLTLTDDGLMIQITDSQERPMFKTGSESPESYMKGILQALVPLLKE 183 Query: 262 STEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 +S+ GHTD+ + + NW LS RA +A +VL+ +G+ +D I ++ G Sbjct: 184 LPNSLSLTGHTDSLAYAGGSGGYSNWELSTGRANAARRVLVNAGLGDDHILRVIGTGSRM 243 Query: 320 LKIASDPMNSANRRIDILVEDR 341 N NRRI ILV + Sbjct: 244 GLTDISADNPMNRRISILVLSK 265 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 44/90 (48%) Query: 14 FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 II ++K ++ G+WKI YADFMT +MAFFLVMW++ ++ D ++ I YF Sbjct: 6 PIIRQRKRKHKKHAHHGGTWKIAYADFMTAMMAFFLVMWLLASSSDMQREMIADYFRMPI 65 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSID 103 K M ++ + I + Sbjct: 66 KPTMGQGNKTSFSESVIPGGGDDVIRQEGE 95 >gi|162454068|ref|YP_001616435.1| hypothetical protein sce5792 [Sorangium cellulosum 'So ce 56'] gi|161164650|emb|CAN95955.1| hypothetical protein sce5792 [Sorangium cellulosum 'So ce 56'] Length = 985 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 88/289 (30%), Gaps = 21/289 (7%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 P G F Q + + + G + + Sbjct: 701 QPGAFGPQPGQPGPFGPQPGQPGAFGPQPGQPGPFGPQPGPFGPQPGGPGAAPSPAQPQG 760 Query: 130 NIFYLSNSQQSEHCKNS----LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE---- 181 F + K +D+E G + +T E S Sbjct: 761 PTFVDVDCSLEALPKTGNIVGTVKDAESGDAVAGATIRLVDAAGREQTATADGSGAFRFP 820 Query: 182 --KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--- 236 A+ K Q ++ D + + + ++ + ++ Sbjct: 821 DLPAGAVTLKVEAQGYMNHVNQADVRTSEDTRAALTVNKRPKISLVKVLGNEIKISRQIH 880 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F+ S+ L ++ ++++I +VL + + + GHTD + N LS RA + Sbjct: 881 FETDSAKILGDSNALMEEIADVLQRNPNIRKVEIQGHTDNT---GGREHNQTLSEARANA 937 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 L+++GV R+ G+ R + + NRR+ ++ ++ Sbjct: 938 VRAWLIRAGVDGSRLLA-KGYGQDRPVAPNVTPANKAKNRRVQFIIVEK 985 >gi|126741155|ref|ZP_01756836.1| hypothetical protein RSK20926_01547 [Roseobacter sp. SK209-2-6] gi|126717792|gb|EBA14513.1| hypothetical protein RSK20926_01547 [Roseobacter sp. SK209-2-6] Length = 474 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 65/193 (33%), Gaps = 7/193 (3%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 L T+ + + + + ++I+ L + Sbjct: 285 SWALSNETENVVGQLSIVDAGQKAELERRAPPPPPPPPAPTIEEQIAKVSGFLEPEIAGG 344 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 V ++I + + MF S +Q++ E L + + GH+D Sbjct: 345 IVKVFQKGNVLIIRL---AGSGMFGSGSDQLSKAFRTPVQRLAEALNDEKGQVIVVGHSD 401 Query: 274 ASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330 P R+ N LSL RA S + + K+ +R+S G A + + Sbjct: 402 NIPIRSSRFPSNMALSLARAKSVMEGMAKAMAEPERLSA-EGRADQEPIADNGTKAGRAK 460 Query: 331 NRRIDILVEDRQG 343 NRRI+IL+ G Sbjct: 461 NRRIEILLVQEVG 473 >gi|126461734|ref|YP_001042848.1| hypothetical protein Rsph17029_0965 [Rhodobacter sphaeroides ATCC 17029] gi|126103398|gb|ABN76076.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 525 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 96/297 (32%), Gaps = 16/297 (5%) Query: 58 DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 + A+ + + + R+ + + +++ + G Sbjct: 232 SETELTAMTLALEEQRRKAEETLTLLAAAKTDAARAVSEADQRAAALAAAREALNAREGE 291 Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + + L N +Q +++ + + L +N Sbjct: 292 GAEAARRVALLNEQVAALRAQLGSLQGLLEAAEAQDAANKVQLQSLGTQLNSALAQVASE 351 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + L + RL+ K ++ S + VL ++ + +F Sbjct: 352 QKRRAELEEAERLRLEAENKDLARFRSEFFGQL--RQVLAGREGVRVVGDRFVFSSEVLF 409 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRN--IARDNWRL 287 + S+ PE + + + L +I + GHTD P RDNW L Sbjct: 410 EPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFGAFRDNWEL 469 Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 S RA S + + +S G R+ +GF +R D + NRRI++ + +R Sbjct: 470 SSARALSVVRFMQQSLGFPPSRL-AATGFGEYRPVTPGDSPDARAQNRRIELKLTER 525 >gi|206974802|ref|ZP_03235717.1| putative chemotaxis protein MotB [Bacillus cereus H3081.97] gi|222095352|ref|YP_002529412.1| flagellar motor protein mots [Bacillus cereus Q1] gi|206746821|gb|EDZ58213.1| putative chemotaxis protein MotB [Bacillus cereus H3081.97] gi|221239410|gb|ACM12120.1| chemotaxis protein MotB, putative [Bacillus cereus Q1] Length = 225 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 4 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 63 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + + L V +N + V TG+ + I+D +FD Sbjct: 64 PDISHEKNDEKTVSKKRMDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297 + PE ++ K+ I + GHTD+ P N NW LS RA + Sbjct: 121 TGDANVKPEAKEIISKLVGFFQSVPNSIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 180 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 181 HLIEVYNVEDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225 >gi|89891334|ref|ZP_01202840.1| chemotaxis motB protein, OmpA family [Flavobacteria bacterium BBFL7] gi|89516365|gb|EAS19026.1| chemotaxis motB protein, OmpA family [Flavobacteria bacterium BBFL7] Length = 289 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 9/148 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + +++ + + + + + + ISI D+ +F S VL K+G + Sbjct: 124 LVTSIKSSLGNVNDEDINVNVEKGVVFISINDKL---LFASGSDQINSNAYTVLGKVGTI 180 Query: 259 LAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315 L + + I GHTD+ P + +DNW LS RA + + L + + R++ G Sbjct: 181 LKDKANMEVMIEGHTDSQPIASANFKDNWDLSTARAAAITRYLQEKEQIDPARMTAA-GR 239 Query: 316 AHHRLKIASDPM--NSANRRIDILVEDR 341 +++ ++D + NRR I++ + Sbjct: 240 SYYVPIASNDTAEGRAKNRRTRIIILPK 267 >gi|300919511|ref|ZP_07136009.1| OmpA family protein [Escherichia coli MS 115-1] gi|300413405|gb|EFJ96715.1| OmpA family protein [Escherichia coli MS 115-1] Length = 211 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + E K +L K L +LA I++ + + E G+ + Sbjct: 4 PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 I D +N MF++ S+ +P +L ++ V I I GHTDA ++N +NW Sbjct: 61 LIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 LS DRA SA +VL ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 175 >gi|326316328|ref|YP_004234000.1| type IV / VI secretion system protein, DotU family [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373164|gb|ADX45433.1| type IV / VI secretion system protein, DotU family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 450 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 68/179 (37%), Gaps = 10/179 (5%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + ++ ++ M + ++ L + + + V Sbjct: 250 NYRLASRSDELFAAINAIRLPKMPSVVAVAPPKPRLRQFLEPEIREGL---VEVNDQADR 306 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR- 282 +++ R +F+ +S+ P + V+Q++ L + + + G++D P R Sbjct: 307 STVTL---RGDGLFEPASTEVKPRYVAVIQRVASALNEVSGKVVVNGYSDNQPIRTARFP 363 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 NW LS +RA + +L ++ R+ G A + + NRR++I++ Sbjct: 364 SNWHLSQERAQAVAAMLQRTITDGSRVKA-EGRAESDPIAPNSTPEGRALNRRVEIVLL 421 >gi|325278144|ref|ZP_08143653.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51] gi|324096719|gb|EGB95056.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51] Length = 263 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 11/220 (5%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + ++ + + D + + + + + + A Sbjct: 39 QSDPQASKVAALETKDAQDWLNKADKAYMDREDEKKVDQLAYLTNQRVEVAKQTIALRTA 98 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K + + + + T G L++ D +FD + + Sbjct: 99 EGELKNAAAQRAQAKLDARDAQIAKLQNSLNAKQTDRGTLVTFGD----VLFDFNKAELK 154 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + K+ + L + E + G+TD+ A N LS RA S L+++GV Sbjct: 155 SNAYPNITKLAQFLQENPERKVIVEGYTDSV---GSASYNQSLSERRANSVRMALVRAGV 211 Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 RI G+ + + + NRR+++ + + Sbjct: 212 DPARIVA-QGYGKEYPVADNSSNSGRAQNRRVEVTISNDN 250 >gi|86160165|ref|YP_466950.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85776676|gb|ABC83513.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter dehalogenans 2CP-C] Length = 542 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 76/231 (32%), Gaps = 15/231 (6%) Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 G + +Q L+++ + N Q + + + + +++ + Sbjct: 322 GQAHTPEQCPALDDDGDGVPNGQDRCPLEKGVAENQGCPDKDTDRDGVPDRLDRCPSVPG 381 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 ++ + D + + + + D + Sbjct: 382 ATDNQGCPKDSDKDGVPDDKDRCPDKPGIPENQGCPPERAEIKAGKI-------DIKEKV 434 Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD + ++ +L + +++ V++I GHTD++ A N LS RA Sbjct: 435 YFDTGKATIKAQSNALLDDVAKLVAANPQVGVVTIEGHTDST---GSAATNRALSQKRAE 491 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ GV R+ GF R ++ NRR++ +++ Sbjct: 492 SVKDYLVSKGVDASRLEA-KGFGPDRPVESNKTAKGREANRRVEFTIQNAN 541 >gi|166710885|ref|ZP_02242092.1| outer membrane protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 365 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 23/254 (9%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 +E + G + + + + + + + D + Sbjct: 119 EEEFDATPNPVSPGQRKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPREN 178 Query: 163 LEKSINKEENYFLP-------PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + +P L D +++ + + Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPNSQPGQTI 238 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + + I + FD + S P+ I +L + E+L + + + GHTD+ Sbjct: 239 GPDGCPVPVSIDLKGVN----FDFNKSTLRPDAISILSEATEILKRYPDLKVEVAGHTDS 294 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------P 326 + N +LS RA + Y L K+GV R+ G+ R + Sbjct: 295 ---KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDGSDNPE 351 Query: 327 MNSANRRIDILVED 340 + NRR ++ V++ Sbjct: 352 GRAKNRRTELNVQN 365 >gi|110678313|ref|YP_681320.1| OmpA family domain-containing protein [Roseobacter denitrificans OCh 114] gi|109454429|gb|ABG30634.1| OmpA family domain protein [Roseobacter denitrificans OCh 114] Length = 221 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L D V T +++S+ +F S P+ L + Sbjct: 81 NLDQQEAELRRDLGNDDVQITNTGDRLIVSLPQDL---LFATDSFSVRPDLQNDLYTVAG 137 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + I + GHTD+ A N RLS RA S +LM +GV+ R+ I G Sbjct: 138 SLQNYPASTIQVIGHTDSD---GDAAYNQRLSERRAGSVAGILMDAGVTPSRLQTI-GRG 193 Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339 + + ++ + NRR++I++ Sbjct: 194 ESQPVASNLNEAGKAQNRRVEIIIL 218 >gi|226314899|ref|YP_002774795.1| chemotaxis protein [Brevibacillus brevis NBRC 100599] gi|226097849|dbj|BAH46291.1| probable chemotaxis protein [Brevibacillus brevis NBRC 100599] Length = 260 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 82/195 (42%), Gaps = 7/195 (3%) Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 +K + + LE + + + S++ KR L D +++ T+ ++ + Sbjct: 69 QKLELQREVYQLEARQKELKGEKVKEGSEDTANVPKRPMGLSDSSERDMETVRNQLSSAL 128 Query: 212 VK-GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + + +E T G+ I + T +F S+ + V+ + VL + I G Sbjct: 129 AELNLDYEETEEGLRIRL---PETILFTSGSADLQAQGKQVVGTVAGVLKRFEHKVRIEG 185 Query: 271 HTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PM 327 +TD P R+ + NW LS RA S + ++ + ++G ++ + + Sbjct: 186 YTDDVPISRSSFQSNWELSSARAISVMREMVDANSLPASRFTVAGLGEYKPLVDNSNAEN 245 Query: 328 NSANRRIDILVEDRQ 342 + NRR++I++ + Sbjct: 246 RAKNRRVEIVILGEK 260 >gi|218961893|ref|YP_001741668.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730550|emb|CAO81462.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 911 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 56/132 (42%), Gaps = 7/132 (5%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270 + + + + + + F+ + ++ P+++ +L+ I + + I + G Sbjct: 665 QQNITKNFRLSKLEKEAVFELENVEFEFNKAVLTPKSLEILKPILATMKENETLEIELSG 724 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MN 328 HTD + N +LS RA + L+K+G+ RI + G+ + ++D Sbjct: 725 HTDNI---GSKQYNRKLSEARAKAVADYLIKNGIDPKRIKTV-GYGFDKPIASNDTPEGR 780 Query: 329 SANRRIDILVED 340 NRR ++ + Sbjct: 781 QRNRRTEMKILG 792 >gi|324019871|gb|EGB89090.1| OmpA family protein [Escherichia coli MS 117-3] Length = 211 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + E K +L K L +LA I++ + + E G+ + Sbjct: 4 PEETEKKARDVNEKTVLLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 I D +N MF++ S+ +P +L ++ V I I GHTDA ++N +NW Sbjct: 61 LIKDDQNRNMFERGSAQIMPFFKRLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 LS DRA SA +VL ++G+ ED++ ++S A L + +P ++ NRRI+I+V + Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTK 175 >gi|163760609|ref|ZP_02167690.1| OmpA/MotB [Hoeflea phototrophica DFL-43] gi|162282224|gb|EDQ32514.1| OmpA/MotB [Hoeflea phototrophica DFL-43] Length = 588 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 91/271 (33%), Gaps = 13/271 (4%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 G L T G+ + + L +D + ++ ++ + K + ++ Sbjct: 328 GLTLGTVDIGLARVSPYIWSGALSSNALVLDGVVPSKAIADRLLESAALKFGRLKIDDRQ 387 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ +L + S L L + + Sbjct: 388 RVAAGAPGGFETAALAALQALSRLDEASVVLRDGALSVRGEALSGNAAADLQRQLEADLP 447 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + A + S L L ++++ +++ + NT FD + + L Sbjct: 448 EAFAAQQSVALKPLPSEDLSG------PSCQNVLNQLLAANTIRFDTGQAGIQHHSFGFL 501 Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 +I +V I GHTDA N LS RA + ++ +GV DR+ Sbjct: 502 DRIAFAARQCRDVRLEISGHTDADGDEGA---NQTLSERRAEAVVAYMVAAGVGPDRVVA 558 Query: 312 ISGFAHHRLKIAS--DPMNSANRRIDILVED 340 I G+ R + D +ANRRI+I V + Sbjct: 559 I-GYGESRPVADNETDTGKAANRRIEIRVVN 588 >gi|108761291|ref|YP_633197.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622] gi|108465171|gb|ABF90356.1| OmpA domain protein [Myxococcus xanthus DK 1622] Length = 640 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 33/273 (12%), Positives = 80/273 (29%), Gaps = 12/273 (4%) Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 + +G+ + P+ ++ + K + + + Sbjct: 359 ADHCPTVEGLSELNGCPDGDDDGDGLPNLADRCPKEAENFNGFEDQDGCPDDPDTDGDGI 418 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 Q ++ D + ++ + KE + Sbjct: 419 SDAKDQCPDQAEDKDGFQDEDGCPDPDNDNDGVLDTADRCPNEAGPKENRGCPDKDTDGD 478 Query: 194 DLAKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + ++ + A N I +++ F+ + I + + +L Sbjct: 479 GIVDRLDNCPTEPGPAKNHGCKEKQLAQIGENRIQLLEA---VYFENNKDIIIARSNKLL 535 Query: 253 QKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + +L E + + GHTD N LS RA + + L+ GV+ +R+ Sbjct: 536 DTVANILIAHPEVEKVRVEGHTDNR---GNPDYNLDLSQRRADAVVRYLVSKGVARERLD 592 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 GF + ++ + NRR++ + Sbjct: 593 A-KGFGPTQPIADNNTTQGRAKNRRVEFKIVGD 624 >gi|256828886|ref|YP_003157614.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256578062|gb|ACU89198.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028] Length = 375 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 81/270 (30%), Gaps = 30/270 (11%) Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 +S K+ I T V L+ + R I E + Sbjct: 100 GASIAKVPTLIGSDPTPLGVALQALEPTLQGASGRNAVIIVSDGRENAGEDSLKVAAALA 159 Query: 152 EKGKDLCKSTDLEKSINKEENYFLP----------PLSKEKILAMKRKKRLQDLAKKISS 201 EK + S+N + + + +K ++D+ ++ Sbjct: 160 EKYNVCFHTVSFADSVNGNQPLLDSITALKPCGVGVSAAQLADDAAMQKFVRDVFYDVAG 219 Query: 202 TLSGLVADNIVKGVL--FETTRTGILISIIDQRNTPM---------FDKSSSIPLPETIV 250 + D+ GV + I+ +D P+ FD S P Sbjct: 220 GVDPCSLDDDGDGVNNCVDKCPDTIMGLAVDADGCPIPEVIRLKVNFDFDKSDIKPAYHQ 279 Query: 251 VLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSED 307 L + + GHTD+ + N +LS RA + L+ + G+ Sbjct: 280 ELADFAAYMKQQQSFTVVEIAGHTDS---KGADEYNQKLSERRAKAVRDYLVTNFGLDGS 336 Query: 308 RISKISGFAHHRLKIASDPM--NSANRRID 335 + G+ + ++D + NRR++ Sbjct: 337 -LFSARGYGESKPVASNDTEEGRAENRRME 365 >gi|224371370|ref|YP_002605534.1| MotB4 [Desulfobacterium autotrophicum HRM2] gi|223694087|gb|ACN17370.1| MotB4 [Desulfobacterium autotrophicum HRM2] Length = 425 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 101/305 (33%), Gaps = 15/305 (4%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 L M +N D ++ L + D+ S+ + + T Sbjct: 122 LTMVSLNE-DIQALTRVKDELEQKVAILGRSLSDRDDQILVLRDRSKALAERLATQAETT 180 Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 +I + + Q + +++ + + + + + + I+ Sbjct: 181 VLAQKEIEAQEIRIQALSAVLASQKEAVAREKQLSATARAEVTLLSDQITRLREQLSMIS 240 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + ++ + K+L + + L ++ + + I Sbjct: 241 NALSLANTQTQEKDEKIVDLGKQLNIALARKVNELEKYQSEFFGRLRKILGNNPAVQIEG 300 Query: 229 ID--QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFR 278 + +F+ S++ + + L + E L ++ I GHTD P Sbjct: 301 DRFVLQAGLLFESGSAVLGDQGRIHLTTLAETLMDIAKKIPDDINWILRIDGHTDRVPIN 360 Query: 279 NIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRID 335 N A NW LS RA + + L + GV E R+ +GF+ + +D + NRRI+ Sbjct: 361 NAAFPSNWELSAARAVAVVRFLSQRGVPEKRM-AAAGFSKYHPIDRADTPAAYQRNRRIE 419 Query: 336 ILVED 340 I + Sbjct: 420 IKLTR 424 >gi|26987857|ref|NP_743282.1| OmpA/MotB domain protein [Pseudomonas putida KT2440] gi|148546400|ref|YP_001266502.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1] gi|24982560|gb|AAN66746.1|AE016303_1 OmpA family protein [Pseudomonas putida KT2440] gi|148510458|gb|ABQ77318.1| OmpA/MotB domain protein [Pseudomonas putida F1] gi|313497483|gb|ADR58849.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1] Length = 230 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ S+ L I L + +S+ GHTD+ N +LS RA+S Sbjct: 126 FEFDSARLTASDKERLNTIATRLKQEAPSARLSVSGHTDSV---GSDSYNQKLSERRAHS 182 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L++SGV + G + + NRR +I ++ Sbjct: 183 VTDYLVESGVPRSSFVSVVGAGETQPVADNATAEGRAMNRRTEIKIQR 230 >gi|289672567|ref|ZP_06493457.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae FF5] Length = 240 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 1/212 (0%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + S L E + + +++ + + + ++ K A+++++ Sbjct: 8 DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVQTTPSPDTVPIEAENAETKAEAVEQERL 67 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L + + +LFE T+ G+ I I+D N PMFD S+ P + Sbjct: 68 EMLLQELQNKVQENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDI 127 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L + + + +SI GHTDA+PF NW LS +RA +A + L+ + +++ Sbjct: 128 LLALADTIKSVPNKVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDSQVA 187 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ G+A L +P N NRRIDI+V ++ Sbjct: 188 RVVGYASSALYDHQNPTNPINRRIDIVVLTKK 219 >gi|126641241|ref|YP_001084225.1| OmpA/MotB [Acinetobacter baumannii ATCC 17978] Length = 397 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 17/225 (7%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 T+Q + + SL +K +++ + +P Sbjct: 185 DTSQTYAAAFTDKDALAGVLGALKGIPNASLEWVGDKITLKAGDAAALEALTAKVKALVP 244 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 ++ + + + L+ + +N+ L + I+ Sbjct: 245 HTEVVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN---------- 294 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS + +L + +L + V + GHTD++ A N LS RA + Sbjct: 295 FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDST---GNAAANKALSQRRAQAV 351 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ GV ++ G + + NRRI+ V Sbjct: 352 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 395 >gi|28211321|ref|NP_782265.1| chemotaxis motB protein [Clostridium tetani E88] gi|28203761|gb|AAO36202.1| chemotaxis motB protein [Clostridium tetani E88] Length = 252 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 8/149 (5%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S + N+ + V ++ G+L+ + D +F+ + + ++ +L KI +++ Sbjct: 104 DKVKSAVQKSNLQESVKIKSDARGVLLELDDS---ILFEIAQADIKQNSLPILDKINKII 160 Query: 260 AHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + + GHTD P +N NW LS RA + + +++ + +G+ Sbjct: 161 STLPNSVMVEGHTDNVPIKNYKYDSNWELSTQRAVNVLRYFVETKKQNPQRFTAAGYGEF 220 Query: 319 RLKIASDP--MNSANRRIDILVE--DRQG 343 + +D S NRR+ I++ DR+G Sbjct: 221 KPIHPNDTLENRSKNRRVTIVIVSIDREG 249 Score = 48.4 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 39/108 (36%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ N W YAD +T+L+ FF++++ ++ D K I F Sbjct: 10 RRKRGKGEGVNGEGWLQTYADTVTLLLTFFVLLYSFSSVDAQKFKQISTAFQSVLSGQNG 69 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 + F+ +N + +N + K+ S QK Q Sbjct: 70 ETVFDFNMKNGDIPLVGETTQMGSATGGKENELYDKVKSAVQKSNLQE 117 >gi|239905020|ref|YP_002951759.1| hypothetical protein DMR_03820 [Desulfovibrio magneticus RS-1] gi|239794884|dbj|BAH73873.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 424 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 9/171 (5%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 K + A +++ ++L + ++ L + + + R + I+ +D+ Sbjct: 57 QSKEEEKKAEKRAQDLERKTEELQTAYDALVADLRGEVDSRQIRVRQFREKLEINFVDK- 115 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLD 290 +F S+ P +L ++G VLA + I + GHTD P + NW LS Sbjct: 116 --ILFPSGSAEISPRGRDILTRVGAVLAKVKDKSIYVVGHTDNVPIHSALFPSNWELSAS 173 Query: 291 RAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S + L G++ +R + + G A ++ ++ NRR+DI+V Sbjct: 174 RAASVIRHLSESGGLAPERFTAM-GRAFYQPVASNATPEGRQENRRVDIIV 223 >gi|330899454|gb|EGH30873.1| flagellar motor protein MotD [Pseudomonas syringae pv. japonica str. M301072PT] gi|330940674|gb|EGH43692.1| flagellar motor protein MotD [Pseudomonas syringae pv. pisi str. 1704B] gi|330976021|gb|EGH76087.1| flagellar motor protein MotD [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 295 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 57 NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + +F ++P + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELNSSM---LFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327 TD P NW LS R+ S ++L GV+ R++ + G+ + + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIVPNTSTAG 232 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 RAKNRRVVLVISR 245 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 30/232 (12%), Positives = 73/232 (31%), Gaps = 10/232 (4%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +++ + + W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 1 MARRRQVEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 K P Q + + E + K+S G + + Sbjct: 59 TERTMK-------PIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDA 111 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + ++ + + S+ L S + + + ++ +KR + Sbjct: 112 FGDLIKSDQMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHV 171 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK-SSSIPLP 246 + + + + + +D N P Sbjct: 172 EGFTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQP 223 >gi|66046660|ref|YP_236501.1| flagellar motor protein MotD [Pseudomonas syringae pv. syringae B728a] gi|63257367|gb|AAY38463.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] gi|330972462|gb|EGH72528.1| flagellar motor protein MotD [Pseudomonas syringae pv. aceris str. M302273PT] Length = 295 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 7/193 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 57 NDTERTMKPIPIGEQRPVSIKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + +F ++P + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELNSSM---LFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327 TD P NW LS R+ S ++L GV+ R++ + G+ + + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIVPNTSTAG 232 Query: 328 NSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 RAKNRRVVLVISR 245 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 30/232 (12%), Positives = 73/232 (31%), Gaps = 10/232 (4%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +++ + + W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 1 MARRRQVEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 K P Q + + E + K+S G + + Sbjct: 59 TERTMK-------PIPIGEQRPVSIKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDA 111 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + ++ + + S+ L S + + + ++ +KR + Sbjct: 112 FGDLIKSDQMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHV 171 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK-SSSIPLP 246 + + + + + +D N P Sbjct: 172 EGFTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQP 223 >gi|256845382|ref|ZP_05550840.1| outer membrane porin F [Fusobacterium sp. 3_1_36A2] gi|256718941|gb|EEU32496.1| outer membrane porin F [Fusobacterium sp. 3_1_36A2] Length = 396 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 10/266 (3%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + DE +R + VD + ++ + + Sbjct: 133 KGAGQYTDENVTIQRDEDGSGQYTNKVTGVTLQVDAQGEGQYLDEKNKISFQISADGTGV 192 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + E ++T + + +E + + Y + K K ++ K Sbjct: 193 YKDEKNDMTVTINEKNATYTSGDITIENNGDGSGTYNDKAKNLLIENDGKGKAKITFNGK 252 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETIVVLQKI 255 L + I + +I + +FD PE VL+ + Sbjct: 253 TTEVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDLRPEAEEVLKNL 312 Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 VL + + + GHTD+ + N LS +RA + L G++ + I G Sbjct: 313 AIVLKEADIKAFEVDGHTDSD---ASDKHNQILSENRANAVKNFLTSQGITAE--ITIKG 367 Query: 315 FAHHRLKIASDPMNS--ANRRIDILV 338 + R ++D NRR++I++ Sbjct: 368 YGESRPIASNDTAEGKQKNRRVEIII 393 >gi|196248997|ref|ZP_03147697.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16] gi|196211873|gb|EDY06632.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16] Length = 191 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 77/181 (42%), Gaps = 10/181 (5%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 ++E ++ K K+ L + +KI + + + + T G+ Sbjct: 6 PPAAQDEQGQEREKQPSPAMSQKEKEGLAQVKEKIDVYIQE---NKLGGKLQTSLTEEGL 62 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI-AR 282 I+I+D +FD S+ + + ++ +L + + I GHTD P N Sbjct: 63 AITILDD---ILFDSGSAEVRMKDRRLASEVAALLVMNPPRNVIISGHTDNVPIHNAQFA 119 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 NW LS+ RA + +VL+++ + R G+ ++ +++ NRR++IL+ Sbjct: 120 SNWELSVMRAVNFMKVLLENKQLDPRYFSAKGYGEYKPIASNETAAGRMKNRRVEILILP 179 Query: 341 R 341 R Sbjct: 180 R 180 >gi|313500273|gb|ADR61639.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1] Length = 263 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 11/220 (5%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + ++ + + D + + + + + + A Sbjct: 39 QSDPQASKVAALETKDAQDWLNKADKAYMDREDEKKVDQLAYLTNQRVEVAKQTIALRTA 98 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K K + + + T G L++ D +FD + + Sbjct: 99 EADLKNASAERAKAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD----VLFDFNKAELK 154 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + K+ + L + E + G+TD+ A N LS RA S L+++GV Sbjct: 155 SNAYPNVTKLAQFLQENPERKVIVEGYTDSV---GSANYNQTLSERRANSVRMALVRAGV 211 Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 RI G+ + + + NRR+++ + + Sbjct: 212 DPARIVS-QGYGKEYPVADNSSNSGRAQNRRVEVTISNDN 250 >gi|162450796|ref|YP_001613163.1| hypothetical protein sce2524 [Sorangium cellulosum 'So ce 56'] gi|161161378|emb|CAN92683.1| putative membrane protein [Sorangium cellulosum 'So ce 56'] Length = 561 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 93/279 (33%), Gaps = 27/279 (9%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F G + + +P R + + D+ + T+ + Sbjct: 288 FRMVGVIGYSFGIKDVEPVSPGRRFQAVPPRAADTDKDGLPD-DIDLCPTDPEDGKPPNA 346 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 ++ + + + + ++ +D K D + + + P +K+ Sbjct: 347 DDGCPALPDRDGDGIPDISDKCPDQPEDFDKINDADGCPEDDADEDSIPDAKDACPKEPG 406 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + + + + T + I I F S+ LP + Sbjct: 407 QPSPE------------PTKNGCPQFIRRITGSSEIQI-----LKQVQFATGSARILPNS 449 Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 +L ++ +L + E+ + GHTD + N +LS DRA+S L++ G+ Sbjct: 450 YSILDEVVRLLKVNPEITLVAIEGHTDNR---GSDQLNEKLSNDRAHSVRTYLIERGGID 506 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 R++ GF R ++ NRR++ + + Sbjct: 507 PARLTAA-GFGPKRPIDDNNTEAGRQKNRRVEFHIRESN 544 >gi|312885261|ref|ZP_07744938.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC BAA-2122] gi|309367068|gb|EFP94643.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC BAA-2122] Length = 323 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F+ S+ PE+ L I EVL + V+ + G+TD + N +LS Sbjct: 209 MGAGNFEFDSAKLKPESANELDSIVEVLEDYPQSVVEVSGYTDT---SGPEKYNQKLSEQ 265 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + VL+ G+ E RI+ I G +++ + NRR++I + Sbjct: 266 RAQAVKAVLIAKGIDESRITAI-GKGEANPIASNETLEGRKQNRRVEINI 314 >gi|323258027|gb|EGA41706.1| hypothetical protein SEEM8283_04036 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] Length = 418 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 48/138 (34%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + + R MF V+ K +A Sbjct: 285 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 341 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD+ P + N LS RA +L GV R+ I G + Sbjct: 342 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 400 Query: 325 DP--MNSANRRIDILVED 340 D + NRR++ILV + Sbjct: 401 DSKAGRAKNRRVEILVVE 418 >gi|262198074|ref|YP_003269283.1| hypothetical protein Hoch_4901 [Haliangium ochraceum DSM 14365] gi|262081421|gb|ACY17390.1| Myxococcales GC_trans_RRR domain protein [Haliangium ochraceum DSM 14365] Length = 1987 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 88/276 (31%), Gaps = 18/276 (6%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 G K + +++ + + E + + K G ++ L + Sbjct: 1680 GAPNDPEDKDGYQDEDGVPDPDNDDDGIPDTEEACPDEPENKNGYQDEDGCPDELPDTDG 1739 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE-----KSINKEENYFLPPLSKEKILAMK 187 + E + D + +D C D + S +K N P ++ + Sbjct: 1740 DGHVDRVDECPEQPEDMDGFEDEDGCPDEDNDEDGVVDSADKCPNEAGPVENRGCPDTDR 1799 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + D + + + I + F + ++ Sbjct: 1800 DGDGVVDRLDNCPDEAGSERNQGCKRRQRVRLSGDRLEI-----LDRVYFRSNRAVLQRR 1854 Query: 248 TIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + +LQ + +VL E + + GHTD N LS RA + L++ GV Sbjct: 1855 SNPLLQNVAQVLIAHPEIEHVRVEGHTDNR---GDPTYNMNLSQSRAEAVVAFLVQEGVE 1911 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 R++ + GF + + +ANRR++ + Sbjct: 1912 AKRLAAV-GFGETQPLEDNKTRRGRAANRRVEFNIL 1946 >gi|212283809|gb|ACJ23322.1| outer membrane protein OmpA [Vibrio parahaemolyticus] Length = 301 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 ++ T F+ S+ L L + + I G+TD+ A N +LS Sbjct: 183 EEYGTGTFEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 239 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + + +G+ DR+ + G + NRR++++V Sbjct: 240 ERRAQAVADYITGAGIDADRL-TVKGMGEENPVADNSTREGREKNRRVEVVV 290 >gi|254254076|ref|ZP_04947393.1| Outer membrane protein [Burkholderia dolosa AUO158] gi|124898721|gb|EAY70564.1| Outer membrane protein [Burkholderia dolosa AUO158] Length = 616 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 8/114 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLD 290 + +FD + P + + + E++ + G+TD N RLS Sbjct: 499 DSMSLFDSGKAQLKPGSNRAMVRAIEMINAHPGKRIVVAGYTDN---AGNPDSNLRLSRA 555 Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA + L+ + G+ + I G+ R ++D + NRR++I + Sbjct: 556 RAQAVRDWLIDASGIPATQF-AIQGYGDTRPIASNDAPDGRARNRRVEITLVPD 608 >gi|237747505|ref|ZP_04577985.1| outer membrane protein A [Oxalobacter formigenes HOxBLS] gi|229378856|gb|EEO28947.1| outer membrane protein A [Oxalobacter formigenes HOxBLS] Length = 207 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD SI PE L ++ L+ + + GHTD N +LS RA Sbjct: 96 DAFFDFDKSIVKPEGKAKLDELVNALSGLDTEVIVAVGHTDWI---GTDAYNQKLSERRA 152 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 + L+ GV ++I G + + + NRR+++ V +G Sbjct: 153 NAVKAYLVSKGVPAEKIFT-EGKGKKQPIADNKTRQGRAKNRRVEVEVVANRG 204 >gi|239817126|ref|YP_002946036.1| OmpA/MotB domain protein [Variovorax paradoxus S110] gi|239803703|gb|ACS20770.1| OmpA/MotB domain protein [Variovorax paradoxus S110] Length = 315 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 8/188 (4%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 D + E + K+RL L + V +L Sbjct: 83 PGGGMDPSTRADGEVQRADAEDDADADRLASMKERLDKL------IENSPVFRQFRSQIL 136 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 + T G+ + I+D N PMFD +S+ +P +L+++G L I++ GHTDA Sbjct: 137 IDITTEGLRLQIVDNENRPMFDLASAQVVPHMRAILRELGPTLNELPNKITLSGHTDAFV 196 Query: 277 FRNIARD--NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 + N R NW LS DRA ++ + L+ G++E+++ ++ G A S+P N NRRI Sbjct: 197 YSNGDRSYGNWELSADRANASRRELVMGGMAENKVLRVVGLADSMHLDRSNPRNPINRRI 256 Query: 335 DILVEDRQ 342 I++ + + Sbjct: 257 SIILLNHR 264 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 44/89 (49%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 ++ ++VA + G WKI YADFMT +MAFFLVMW+++ T ++ I ++F K Sbjct: 8 VVVRRVAAHGGGGHGGGWKIAYADFMTAMMAFFLVMWLLSNTSPKQREGIAEHFRMPLKV 67 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDE 104 ++ + + + + E Sbjct: 68 ALSGGEKSSTSISVVPGGGMDPSTRADGE 96 >gi|94264345|ref|ZP_01288137.1| OmpA/MotB [delta proteobacterium MLMS-1] gi|93455239|gb|EAT05452.1| OmpA/MotB [delta proteobacterium MLMS-1] Length = 240 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + P ++ +L+++ E+LA + I GH+D P + NW LS RA + Sbjct: 128 FASGRAEPREPSLPILERLAELLAGKPAYRVVIAGHSDDLPISSERYPSNWYLSSARAVA 187 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L + GV R++ G A + ++A+D + NRR++I + + Sbjct: 188 VAEYLQQQGVDPGRLTT-QGHAEFKPRVANDSPQNRAKNRRVEITLLRDE 236 >gi|301019118|ref|ZP_07183322.1| OmpA family protein [Escherichia coli MS 69-1] gi|300399377|gb|EFJ82915.1| OmpA family protein [Escherichia coli MS 69-1] Length = 211 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + E K +L K L +LA I++ + + E G+ + Sbjct: 4 PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 I D +N MF++ S+ +P +L ++ V I I GHTDA ++N +NW Sbjct: 61 LIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 LS DRA SA +VL ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 175 >gi|257866373|ref|ZP_05646026.1| flagellar motor protein MotB [Enterococcus casseliflavus EC30] gi|257873111|ref|ZP_05652764.1| flagellar motor protein MotB [Enterococcus casseliflavus EC10] gi|257800331|gb|EEV29359.1| flagellar motor protein MotB [Enterococcus casseliflavus EC30] gi|257807275|gb|EEV36097.1| flagellar motor protein MotB [Enterococcus casseliflavus EC10] Length = 256 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 8/182 (4%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + ++ + A++ + Q L K L A + + G+ Sbjct: 73 ETTPRKKAATSAEAQAQEAAVRTQLENQQLEKISDQLSQELAASGLKEQTEVRLESDGLH 132 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRN--IAR 282 I++ ++ +F S+ T L + + L I I GHTD P + + Sbjct: 133 ITL---ASSILFASGSAEITDTTRQSLDLLSDSLKKLKANKIVIAGHTDNVPEKGNGRYQ 189 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 NW LS RA + + + G ++ + I FA K ++ S NRR++++++ Sbjct: 190 SNWDLSSARAITVMEYFISKGAVLEKNAAIQAFADTEPKADNNTPQGRSENRRVEMIIQR 249 Query: 341 RQ 342 + Sbjct: 250 TE 251 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 53/122 (43%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W + Y+D +T+L+A F+VM+ + DD+ + I+ F + + Sbjct: 2 KRKKKHEEHVDEAWLLPYSDMLTLLLALFIVMFAMAKVDDEKFQEIKSEFGTILSSHHSN 61 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S I + E + + K S + + +V ++ + +K +L + +Q Sbjct: 62 SSVIGSVIDMGETTPRKKAATSAEAQAQEAAVRTQLENQQLEKISDQLSQELAASGLKEQ 121 Query: 140 SE 141 +E Sbjct: 122 TE 123 >gi|326798978|ref|YP_004316797.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] gi|326549742|gb|ADZ78127.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] Length = 269 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 14/223 (6%) Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 +++N+ ++ + R + ++L S+ K + L + + + Sbjct: 46 AQIKNDNLEDELAKLRADTASLGRRLASLEENLSSSSSEAKKLAANLAEREERLKEVEDV 105 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 KR++ L K+ L G + + + + + D+ +F S I Sbjct: 106 LRKREEAGNQLKDKLQRALLGFKESGL----TVDMREGKVYVLLADKL---LFSSGSIII 158 Query: 245 LPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLM- 300 L ++ +VL E+ + GHTD R +DNW LS+ R+ S + L Sbjct: 159 DQRGKQALAELAKVLNTQPEINMAVEGHTDNQKVRSLGQIKDNWDLSVLRSTSVVRYLTE 218 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + G+ R+ +G +D + NRRI+I++ + Sbjct: 219 EEGIDPKRLIA-TGKGEFTPVDTADTPEARSANRRIEIVLSPK 260 >gi|294785320|ref|ZP_06750608.1| outer membrane porin F [Fusobacterium sp. 3_1_27] gi|294487034|gb|EFG34396.1| outer membrane porin F [Fusobacterium sp. 3_1_27] Length = 396 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 10/266 (3%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + DE +R + VD + ++ + + Sbjct: 133 KGAGQYTDENVTIQRDEDGSGQYTNKVTGVTLQVDAQGEGQYLDEKNKISFQIGADGTGV 192 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + E ++T + + +E + + Y + K K ++ K Sbjct: 193 YKDEKNDMTVTINEKNATYTSGDITIENNGDGSGTYNDKAKNLLIENDGKGKAKITFNGK 252 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETIVVLQKI 255 L + I + +I + +FD PE VL+ + Sbjct: 253 TTEVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDLRPEAEEVLKNL 312 Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 VL + + + GHTD+ + N LS +RA + L G++ + I G Sbjct: 313 AIVLKEADIKAFEVDGHTDSD---ASDKHNQILSENRANAVKNFLTSQGITAE--ITIKG 367 Query: 315 FAHHRLKIASDPMNS--ANRRIDILV 338 + R ++D NRR++I++ Sbjct: 368 YGESRPIASNDTAEGKQKNRRVEIII 393 >gi|255323068|ref|ZP_05364204.1| outer membrane fibronectin-binding protein [Campylobacter showae RM3277] gi|255299930|gb|EET79211.1| outer membrane fibronectin-binding protein [Campylobacter showae RM3277] Length = 332 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 9/124 (7%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273 V+ + T +I + D F S P+ + ++K+ + + + GHTD Sbjct: 210 VVVDETGCEKVIVLRDIGVN--FAFDSYKITPKYLEEIRKVANFMGENPGYRVVLSGHTD 267 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331 + N +LS RA + + L + GVS D+I+ + G+ + ++ + N Sbjct: 268 SV---GAEAYNQKLSEKRANAVAKALEELGVSADKITTV-GYGELKPVASNKTKEGRAEN 323 Query: 332 RRID 335 RR++ Sbjct: 324 RRVE 327 >gi|124003367|ref|ZP_01688217.1| outer membrane protein [Microscilla marina ATCC 23134] gi|123991465|gb|EAY30896.1| outer membrane protein [Microscilla marina ATCC 23134] Length = 116 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 N F+ + ++ V L + + L + E+ I GHTD N LS R Sbjct: 6 NNVFFEYNKYALKDKSKVELDNLVKFLKENPEISGEISGHTDNI---GDKARNRELSQQR 62 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 A S L+ GV R+ G+ + +D + NRRI+ + Sbjct: 63 ANSVRDYLVSHGVDASRLV-YKGYGDSKPAATNDTEEGRAKNRRIEFKILK 112 >gi|42780820|ref|NP_978067.1| flagellar motor protein MotS [Bacillus cereus ATCC 10987] gi|42736740|gb|AAS40675.1| chemotaxis protein MotB, putative [Bacillus cereus ATCC 10987] gi|324325747|gb|ADY21007.1| flagellar motor protein MotS [Bacillus thuringiensis serovar finitimus YBT-020] Length = 225 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 4 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 63 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + + L V +N + V TG+ + I+D +FD Sbjct: 64 PDISHEKNDEKMVSKKRMDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297 + PE ++ K+ I + GHTD+ P N NW LS RA + Sbjct: 121 TGDANVKPEAKEIISKLVGFFQSVPNSIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 180 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 181 HLIEVYNVEDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225 >gi|51244080|ref|YP_063964.1| outer membrane protein F [Desulfotalea psychrophila LSv54] gi|50875117|emb|CAG34957.1| probable outer membrane protein F [Desulfotalea psychrophila LSv54] Length = 216 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 10/151 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + L +L + + FD +S P + Sbjct: 74 NQIGRYMDQQEQDLRNAVAASNAASVRRDQDVLTATF--KGETFFDTNSFTIKPGGWAEV 131 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++ VL I + GHTD+ N +LS RA + L++ GV+ +RI Sbjct: 132 NRVATVLNKYPNTNIKVAGHTDSL---GNEAYNQQLSERRARAVKNALIQYGVNGNRIRA 188 Query: 312 ISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 I G+ +S+ + NRR++I++ Q Sbjct: 189 I-GYGESLPISSSN---AQNRRVEIVITPNQ 215 >gi|322432961|ref|YP_004210210.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] gi|321165188|gb|ADW70892.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] Length = 239 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 7/182 (3%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 S + E P+ + + L+ K+S L G++ D I K + Sbjct: 54 MSAAQTETAPETPVPDQLRGPTQSADPLRFDTAKLSQQLQGVLGDAIDKHEIVMQQTADG 113 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARD 283 I I R F+ + LP LQ +VL + + GH+D P + Sbjct: 114 FI--ISLRELGFFNSGEATLLPGAAAKLQDTAKVLMEDGLEVRVEGHSDDQPIHNGQFQS 171 Query: 284 NWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 NW LS RA S +L+ ++G +I ++G+ + + ++ NRR+D++V Sbjct: 172 NWELSTARAMSVLSLLVDEAGFPPTKI-SVAGYGPYHPVADNATLDGRRSNRRVDLVVLS 230 Query: 341 RQ 342 + Sbjct: 231 PR 232 >gi|71898965|ref|ZP_00681131.1| OmpA/MotB [Xylella fastidiosa Ann-1] gi|71731211|gb|EAO33276.1| OmpA/MotB [Xylella fastidiosa Ann-1] Length = 375 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + + FD S P+ + VL++ E+L + + + GHTD++ A N Sbjct: 261 VPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPDLHVEVAGHTDST---GPAAYN 317 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 +LS RA Y L +G+ R+ G+ + + NRR ++ V++ Sbjct: 318 KKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKTPAGRAKNRRTELNVQN 375 >gi|322507807|gb|ADX03261.1| OmpA/MotB [Acinetobacter baumannii 1656-2] gi|323517407|gb|ADX91788.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715] Length = 397 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 17/225 (7%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 T+Q + + SL +K +++ + +P Sbjct: 185 DTSQTYAAAFTDKDALAGVLGALKGIPDASLEWVGDKITLKAGDAAALEALTAKVKALVP 244 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 ++ + + + L+ + +N+ L + I+ Sbjct: 245 HTEVVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIIN---------- 294 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS + +L + +L + V + GHTD++ A N LS RA + Sbjct: 295 FASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDST---GNAAANKALSQRRAQAV 351 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ GV ++ G + + NRRI+ V Sbjct: 352 VDYLVSKGVDASKLVA-KGHGSEQPVADNTTEEGRFKNRRIEFSV 395 >gi|215433387|gb|ACJ66659.1| OmpA domain protein [Myxococcus fulvus HW-1] Length = 620 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 75/246 (30%), Gaps = 14/246 (5%) Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 D+ E T N + G + +Q + + D + D Sbjct: 371 TDVCPTEPETVNGFQDEDGCPDDPNAHQPSAEERQPSAPPAPLTLPPPPVDTDGDGLVDS 430 Query: 158 CKS-TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + + + E+ P + + L + + + Sbjct: 431 EDLCPNAAEDTDGFEDEDGCPDPDNDQDGIPDAEDQCPLEAETINGVKDDDGCPDKGKAR 490 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDA 274 I+I + F + L + +L+++ L + E + + GHTD Sbjct: 491 VRVEGARIVI-----LDKVYFATGRDVILARSHSLLRQVASTLKANPRIERVRVEGHTDD 545 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 N LS RA + L+K G++ +R+ + G+ + + NR Sbjct: 546 Q---GAEAKNLDLSQRRAKNVVDFLVKVGIAAERLEAV-GYGEAKPVDTNKTAKGRENNR 601 Query: 333 RIDILV 338 R++ + Sbjct: 602 RVEFNI 607 >gi|325567537|ref|ZP_08144204.1| flagellar motor protein B [Enterococcus casseliflavus ATCC 12755] gi|325158970|gb|EGC71116.1| flagellar motor protein B [Enterococcus casseliflavus ATCC 12755] Length = 256 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 69/182 (37%), Gaps = 8/182 (4%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + ++ + A++ + Q L K L A + G+ Sbjct: 73 ETTPRKKAATSAEAQAQEAAVRTQLENQQLEKISDQLSQELAASGLKDQTEVRLESDGLH 132 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRN--IAR 282 I++ ++ +F S+ T L + + L I I GHTD P + + Sbjct: 133 ITL---ASSILFASGSAEITDTTRQSLDLLSDSLKKLKANKIVIAGHTDNVPEKGNGRYQ 189 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 NW LS RA + + + G ++ + I FA K ++ S NRR++++++ Sbjct: 190 SNWDLSSARAITVMEYFISKGAVLEKNAAIQAFADTEPKADNNTPQGRSENRRVEMIIQR 249 Query: 341 RQ 342 + Sbjct: 250 TE 251 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 51/122 (41%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W + Y+D +T+L+A F+VM+ + DD+ + I F + + Sbjct: 2 KRKKKHEEHVDEAWLLPYSDMLTLLLALFIVMFAMAKVDDEKFQEIRSEFGTILSSHHSN 61 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + I + E + + K S + + +V ++ + +K +L + Q Sbjct: 62 ASVIGSVIDMGETTPRKKAATSAEAQAQEAAVRTQLENQQLEKISDQLSQELAASGLKDQ 121 Query: 140 SE 141 +E Sbjct: 122 TE 123 >gi|126662906|ref|ZP_01733905.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38] gi|126626285|gb|EAZ96974.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38] Length = 321 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 100/303 (33%), Gaps = 13/303 (4%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 ++ + + +E + K S + + +K L + K Sbjct: 11 VLSLTTSCVSKKIYQDLENKYADLKKEHNALSDENTTLKTDKNQLELDKNSLQTELDKVK 70 Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 + D K+ + ++ + ++ ++ + +L + Sbjct: 71 SERDKLAADYAATKKNLDNLKASYAALEKDSNDALEANINKNRQLLAELEAKQKALTAEQ 130 Query: 169 KEENYFLPPLSKE---KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N L K + KK+ TLS + KG+ + Sbjct: 131 DRLNKLKKDLEASSTRLAELEKMMADKEAAMKKLKETLSKSLKAFEGKGLTVTEKDGKVY 190 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF----RNI 280 +S+ N +F+ S E ++ +GEVL + E+ I GHTD Sbjct: 191 VSM---ENKLLFESGSWTVGAEGKKAVKALGEVLGQNPEISVLIEGHTDNDKITGTIGGG 247 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 +NW LS RA + +L ++ + + +G + +D + NRRI+I++ Sbjct: 248 VENNWDLSTKRATAIVNILGENKAIDKKNLTAAGRGEFAPLMTNDSAEGKAKNRRIEIIL 307 Query: 339 EDR 341 + Sbjct: 308 TPK 310 >gi|159025752|emb|CAO02050.1| outer membrane protein A [Bordetella trematum] Length = 165 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD + PE +L ++ + I GHTD+ N +LS+ RA + Sbjct: 58 FFDFDKATLKPEGRQLLDQVAQQAKAINLETIIAVGHTDSI---GTEAYNMKLSVRRADA 114 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 L+ G+ +RI G + ++ + NRR++I + + Sbjct: 115 VKAYLVGQGIDPNRIYT-EGKGEAQPIASNKTAEGRARNRRVEIEIVGSR 163 >gi|209522485|ref|ZP_03271080.1| type IV / VI secretion system protein, DotU family [Burkholderia sp. H160] gi|209497081|gb|EDZ97341.1| type IV / VI secretion system protein, DotU family [Burkholderia sp. H160] Length = 444 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 90/298 (30%), Gaps = 16/298 (5%) Query: 47 FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106 FFL++ + D + + + D S + +++ I Sbjct: 156 FFLILQRLAQ-DPARNVDVLELLYVILSLGFEGRYRLIDGGRSQLESVRERLERIIRNQR 214 Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 +L + ++ L + + + + + + + + Sbjct: 215 GAFETELSVHWRPAERARMPLGQRMPPWVCAALAAVVVVATHIVLAQSLNRTSDP-VFDA 273 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 +N+ P I L+ ++ + + V T ++ Sbjct: 274 LNRIRVSERPTAQASVIAPAAMLAAAATLSTFLAPEIRQGL-------VSVHETADRSIV 326 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNW 285 +I +F S+ P ++ +I E L I + GHTD + NW Sbjct: 327 TITGDN---LFASGSATLDPAYDALIGRIAEALKSVPGKIVVTGHTDDQRLVSARFPSNW 383 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 LS RA S +L + R S G +++ + NRR++I + Sbjct: 384 HLSQARAESVRAMLASLSGAPARFSA-EGRGDAEPLASNETPAGRAKNRRVEITLLAP 440 >gi|124516288|gb|EAY57796.1| putative flagellar motor protein (OmpA/MotB) [Leptospirillum rubarum] Length = 261 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 10/160 (6%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 K ++Q + + L ++ V+ + I + +F + Sbjct: 78 KATPQVQSVMIRALELLVQKSSEKGDMKVVQTKEGIVLRIQ-----SRFLFASGHARVRR 132 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-V 304 + + VL+KI +LA + I + G+TD P R +NW LS RA + L++ G + Sbjct: 133 KAVPVLRKIAALLARTNHEIRVHGYTDNQPIRTSRYPNNWALSTMRAVNVLTRLLEYGSI 192 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 R+ GF R ++ NRR++IL+ +R+ Sbjct: 193 DPGRMGAA-GFGKFRPIASNLTPEGREKNRRVEILIMNRE 231 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 27/56 (48%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 K + NL W + YADF+T+L AFF++++ I + + + + + Sbjct: 3 KKPRHEEHENLERWLVSYADFITLLFAFFVMLYAIASVNTGKFRVLSNAIVAAFTH 58 >gi|95928801|ref|ZP_01311547.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684] gi|95135146|gb|EAT16799.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684] Length = 415 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 74/287 (25%), Gaps = 21/287 (7%) Query: 56 ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 A + + + + F Q P + D ID + + Sbjct: 143 AVNTEVRHMLATSGESNNLLASAGLVYYFGGQKPAPAPLDSDGDGVIDADDQCPNTPAGV 202 Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 + + ++ + ++ + + Sbjct: 203 TVNSMGCPLDTDGDGVYDYLDKCPGTPAGVAVDGKGCPLDTDGD------GVYDYLDKCP 256 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 + A+ + + + V + + + I Sbjct: 257 GTPKGVAVDAVGCPLPMDSDGDGVYDDVDRCPNSPAGAHVDEYGCQLVLTLLIE------ 310 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYS 294 FD + + P+ I + + I GHTD+ N +LS RA + Sbjct: 311 -FDTNKADIRPQHIQDMTNAAAFINKYPGEKILISGHTDSD---GSEAYNQQLSQRRADA 366 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 L+++ + ++ GF + + NRR+++ + Sbjct: 367 VKAYLIQNYAIDGTNLTA-KGFGESQPIADNTTAAGKQKNRRVELSL 412 >gi|71276570|ref|ZP_00652844.1| OmpA/MotB [Xylella fastidiosa Dixon] gi|71901217|ref|ZP_00683319.1| OmpA/MotB [Xylella fastidiosa Ann-1] gi|170730957|ref|YP_001776390.1| outer membrane protein [Xylella fastidiosa M12] gi|71162641|gb|EAO12369.1| OmpA/MotB [Xylella fastidiosa Dixon] gi|71729028|gb|EAO31157.1| OmpA/MotB [Xylella fastidiosa Ann-1] gi|167965750|gb|ACA12760.1| outer membrane protein [Xylella fastidiosa M12] Length = 375 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + + FD S P+ + VL++ E+L + + + GHTD++ A N Sbjct: 261 VPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPDLHVEVAGHTDST---GPAAYN 317 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 +LS RA Y L +G+ R+ G+ + + NRR ++ V++ Sbjct: 318 KKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKTPAGRAKNRRTELNVQN 375 >gi|85858897|ref|YP_461099.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB] gi|85721988|gb|ABC76931.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB] Length = 180 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD +S+ P+ + ++ VL + I + G+TD+ + N LS Sbjct: 66 KGDVTFDTNSAEIRPDLYFEIDRVAGVLKQYPDTFIRVEGYTDS---KGSDTYNMDLSKR 122 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + +L++ GV+E+RI ++ GF +D NRR++I + Sbjct: 123 RANAVKNLLVQRGVAENRI-EVVGFGETMPVATNDTEAGRQKNRRVEIKI 171 >gi|323225691|gb|EGA09915.1| hypothetical protein SEEM0055_14308 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] Length = 324 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 48/138 (34%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + + R MF V+ K +A Sbjct: 191 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 247 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD+ P + N LS RA +L GV R+ I G + Sbjct: 248 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 306 Query: 325 DP--MNSANRRIDILVED 340 D + NRR++ILV + Sbjct: 307 DSKAGRAKNRRVEILVVE 324 >gi|322614563|gb|EFY11492.1| hypothetical protein SEEM315_18040 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620081|gb|EFY16953.1| hypothetical protein SEEM971_15751 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623376|gb|EFY20215.1| hypothetical protein SEEM973_06161 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629326|gb|EFY26105.1| hypothetical protein SEEM974_10273 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632046|gb|EFY28800.1| hypothetical protein SEEM201_09439 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637216|gb|EFY33918.1| hypothetical protein SEEM202_19199 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639968|gb|EFY36639.1| hypothetical protein SEEM954_15657 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645904|gb|EFY42424.1| hypothetical protein SEEM054_14670 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652397|gb|EFY48751.1| hypothetical protein SEEM675_07291 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652601|gb|EFY48951.1| hypothetical protein SEEM965_20397 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660411|gb|EFY56647.1| hypothetical protein SEEM19N_20108 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664564|gb|EFY60757.1| hypothetical protein SEEM801_06607 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669383|gb|EFY65533.1| hypothetical protein SEEM507_01240 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670929|gb|EFY67062.1| hypothetical protein SEEM877_06997 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678832|gb|EFY74887.1| hypothetical protein SEEM867_12360 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681861|gb|EFY77886.1| hypothetical protein SEEM180_16428 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687987|gb|EFY83953.1| hypothetical protein SEEM600_10746 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194341|gb|EFZ79536.1| hypothetical protein SEEM581_21554 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197757|gb|EFZ82889.1| hypothetical protein SEEM501_21645 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203447|gb|EFZ88472.1| hypothetical protein SEEM460_07455 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206808|gb|EFZ91761.1| hypothetical protein SEEM020_02639 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213373|gb|EFZ98174.1| hypothetical protein SEEM6152_07603 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214666|gb|EFZ99417.1| hypothetical protein SEEM0077_18540 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221803|gb|EGA06208.1| hypothetical protein SEEM0047_03122 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323230011|gb|EGA14131.1| hypothetical protein SEEM0052_01387 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233750|gb|EGA17839.1| hypothetical protein SEEM3312_07048 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238556|gb|EGA22614.1| hypothetical protein SEEM5258_09862 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244244|gb|EGA28253.1| hypothetical protein SEEM1156_09790 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246405|gb|EGA30388.1| hypothetical protein SEEM9199_12008 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252212|gb|EGA36065.1| hypothetical protein SEEM8282_14849 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259875|gb|EGA43506.1| hypothetical protein SEEM8284_21890 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265110|gb|EGA48609.1| hypothetical protein SEEM8285_20494 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272673|gb|EGA56080.1| hypothetical protein SEEM8287_15269 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 434 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 48/138 (34%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + + R MF V+ K +A Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD+ P + N LS RA +L GV R+ I G + Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416 Query: 325 DP--MNSANRRIDILVED 340 D + NRR++ILV + Sbjct: 417 DSKAGRAKNRRVEILVVE 434 >gi|218783104|ref|YP_002434422.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764488|gb|ACL06954.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] Length = 217 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 10/145 (6%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + E +++++ N+ +F +SS P L+ I +V+ Sbjct: 80 KMGKQAQELEQIPNTQVEVQEDKVVVTM---DNSILFAVNSSTVQPAAQGTLRDIAQVMV 136 Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + I ++GHTD++ N +LS RA +L+ GV RI+ I G Sbjct: 137 KYPDTQIMVKGHTDST---GGEEYNQQLSERRANVVKNILISYGVPAHRITAI-GLGEVM 192 Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342 ++D + NRR++I V Q Sbjct: 193 PIASNDTPDGRAMNRRVEIEVRPIQ 217 >gi|148287120|emb|CAK36854.1| outer membrane protein A [Bordetella ansorpii] Length = 181 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L ++ + I GHTD+ N +LS RA S Sbjct: 75 FFDFDKSTLKPEGRQLLDQVASQVNTINLETLIAVGHTDSI---GSDAYNQKLSERRAAS 131 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+ G+ +RI G + ++ + NRR++I + + Sbjct: 132 VKSYLVSKGIDPNRIYT-EGKGEKQPVASNSTREGRAKNRRVEIEIVGTR 180 >gi|229195941|ref|ZP_04322694.1| OmpA/MotB domain protein [Bacillus cereus m1293] gi|228587500|gb|EEK45565.1| OmpA/MotB domain protein [Bacillus cereus m1293] Length = 213 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 13/219 (5%) Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ L + S + K L K +D E+ K +P +S EK Sbjct: 3 TFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTIPDISHEKNDEK 62 Query: 187 K-RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 KKR+ DL KK+ + V +N + V TG+ + I+D +FD + Sbjct: 63 MVSKKRMDDLYKKLKAY----VDNNGISQVNVYREDTGVSVVIVDNL---IFDTGDANVK 115 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SG 303 PE ++ K+ I + GHTD+ P N NW LS RA + L++ Sbjct: 116 PEAKEIISKLVGFFQSVPNSIVVEGHTDSRPIHNEKFPSNWELSSARAANMIHHLIEVYN 175 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 V + R++ + G+A + + +D NRR+ I +++ Sbjct: 176 VEDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 213 >gi|313205304|ref|YP_004043961.1| ompa/motb domain protein [Paludibacter propionicigenes WB4] gi|312444620|gb|ADQ80976.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4] Length = 294 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 84/209 (40%), Gaps = 9/209 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + + + ++ + + S + + + L K R + K Sbjct: 79 KLEKQNGELMDKNLSQNQQFSNSLKQKSAELAAKEKLLQERENALNDLKKVVARQDSITK 138 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 ++++ L + + E + +S+ D+ +F S+ + I ++ + + Sbjct: 139 RLNNVLRDALLGFKSDELSVEIKNGKVYVSMSDKL---LFKSGSAAIESKGIDAIKVLAD 195 Query: 258 VLAHSTEVIS-IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISG 314 VL + E+ + GHTD P + +DNW LS+ RA S ++L + ++ R++ SG Sbjct: 196 VLNKNAEIDILVEGHTDNIPIKTALYQDNWDLSVARAISIVRILTNEYRIAPTRLTA-SG 254 Query: 315 FAHHRLKIASDPMNSA--NRRIDILVEDR 341 + ++ NRR +I++ + Sbjct: 255 KGEFSPRASNATPEGRASNRRTEIILSPK 283 >gi|300902537|ref|ZP_07120514.1| OmpA family protein [Escherichia coli MS 84-1] gi|301302019|ref|ZP_07208152.1| OmpA family protein [Escherichia coli MS 124-1] gi|300405350|gb|EFJ88888.1| OmpA family protein [Escherichia coli MS 84-1] gi|300842571|gb|EFK70331.1| OmpA family protein [Escherichia coli MS 124-1] gi|315253712|gb|EFU33680.1| OmpA family protein [Escherichia coli MS 85-1] Length = 211 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + E K +L K L +LA I++ + + E G+ + Sbjct: 4 PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 I D +N MF++ S+ +P +L ++ V I I GHTDA ++N +NW Sbjct: 61 LIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 LS DRA SA +VL ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 175 >gi|182682319|ref|YP_001830479.1| OmpA/MotB domain-containing protein [Xylella fastidiosa M23] gi|182632429|gb|ACB93205.1| OmpA/MotB domain protein [Xylella fastidiosa M23] gi|307578598|gb|ADN62567.1| OmpA/MotB domain-containing protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 375 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + + FD S P+ + VL++ E+L + + + GHTD++ A N Sbjct: 261 VPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPDLHVEVAGHTDST---GPAAYN 317 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 +LS RA Y L +G+ R+ G+ + + NRR ++ V++ Sbjct: 318 KKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKTPAGRAKNRRTELNVQN 375 >gi|167035287|ref|YP_001670518.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1] gi|166861775|gb|ABZ00183.1| OmpA/MotB domain protein [Pseudomonas putida GB-1] Length = 239 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 7/116 (6%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDN 284 + I+D MF S+ P LQ + L + + + + GHTD N Sbjct: 127 VIILDDNGAVMFAFDSADLTPAAQQRLQGLVAKLDSPTVAKVRVIGHTDNV---GSDSYN 183 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 LS RA S + L+ G+ +++ G ++ + NRR+++ + Sbjct: 184 QALSERRASSVAEYLIGQGLEAGKVTS-QGRGESEPVTDNETEEGRARNRRVELHL 238 >gi|124006808|ref|ZP_01691638.1| OmpA domain protein [Microscilla marina ATCC 23134] gi|123987489|gb|EAY27198.1| OmpA domain protein [Microscilla marina ATCC 23134] Length = 570 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 86/236 (36%), Gaps = 9/236 (3%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + +N+ + T K ++ + S+ + ++ T + + S ++ Sbjct: 339 VQQNTEETITSETPTAKYTIKIVKDAAGNVISRDTIKTESLTTEELTSSETPTHSYKIKL 398 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 +K N + K+ G +A+ + + + I Sbjct: 399 IKDKNGNVVRRDTLEAKMKDKDGDGVADVNDNCPDEA--GTLANKGCPETISKAKLSDIQ 456 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDN 284 + ++ F + E+I L+ I ++ +I GH+D A +N Sbjct: 457 KELARHAHSLHFASGKTTINDESIPDLKAILAIMKKYPKNKFNIEGHSDNV---GNAANN 513 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RLS RA S Q + +G++ R+ G+ R ++++ NRRI++LV Sbjct: 514 LRLSQQRANSVRQYFVNNGIAASRLIA-KGYGQTRPEVSNATAAGRKKNRRIEVLV 568 >gi|119472020|ref|ZP_01614278.1| putative lipoprotein [Alteromonadales bacterium TW-7] gi|119445155|gb|EAW26447.1| putative lipoprotein [Alteromonadales bacterium TW-7] Length = 210 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 49/145 (33%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + GV + + I F S L I Sbjct: 67 DYMDKQEEAFRDELAGSGVEVVREGDNLRLVIPSNIT---FATDQSYISTGFNDTLNAIA 123 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +V+ +S+ GHTD++ N LS +RA S L + RIS SGF Sbjct: 124 KVMNKYEKTYLSVEGHTDST---GQDSYNMNLSRERAQSVKAYLANQDIMAARIST-SGF 179 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 R +D + NRR++I + Sbjct: 180 GETRPIATNDTANGRAQNRRVEIQI 204 >gi|300977371|ref|ZP_07173862.1| OmpA family protein [Escherichia coli MS 45-1] gi|301045873|ref|ZP_07193060.1| OmpA family protein [Escherichia coli MS 185-1] gi|300302123|gb|EFJ58508.1| OmpA family protein [Escherichia coli MS 185-1] gi|300409896|gb|EFJ93434.1| OmpA family protein [Escherichia coli MS 45-1] gi|315295164|gb|EFU54499.1| OmpA family protein [Escherichia coli MS 153-1] gi|315300866|gb|EFU60088.1| OmpA family protein [Escherichia coli MS 16-3] gi|324010200|gb|EGB79419.1| OmpA family protein [Escherichia coli MS 57-2] Length = 211 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + E K +L K L +LA I++ + + E G+ + Sbjct: 4 PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 I D +N MF++ S+ +P +L ++ V I I GHTDA ++N +NW Sbjct: 61 LIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 LS DRA SA +VL ++G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 175 >gi|170767971|ref|ZP_02902424.1| lateral flagellar motor protein B [Escherichia albertii TW07627] gi|170123459|gb|EDS92390.1| lateral flagellar motor protein B [Escherichia albertii TW07627] Length = 222 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 3/175 (1%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + E K +L + L +LA I++ + + E G+ + Sbjct: 21 PEETEKKARDVNEKTALLKKRSATELGELATSINTIARHAHMEA---NLEMEIVPQGLRV 77 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 I D +N MF++ S+ +P +L ++ V I I GHTDA ++N +NW Sbjct: 78 LIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 137 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 LS DRA SA +VL +G+ ED++ ++S A L A +P ++ NRRI+I+V + Sbjct: 138 LSGDRALSARRVLEDAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 192 >gi|294787848|ref|ZP_06753092.1| OmpA family protein [Simonsiella muelleri ATCC 29453] gi|294484141|gb|EFG31824.1| OmpA family protein [Simonsiella muelleri ATCC 29453] Length = 217 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV + I +++ + F L + Sbjct: 76 YMDYQEKKLREQLADTGVEVQREGNQIKLTMPENVT---FATGRYDLSVNAQNSLNGAAQ 132 Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 LA E I GHTD++ N LS +RA + Q L+ GVS RIS G Sbjct: 133 TLATYNETTISIIGHTDST---GNDSINIPLSQNRANAVAQYLISKGVSSSRISTA-GHG 188 Query: 317 HHRLKIASDPM--NSANRRIDILV 338 + ++ + NRR++IL+ Sbjct: 189 ASQPIASNSTAEGRAQNRRVEILI 212 >gi|217978498|ref|YP_002362645.1| type IV / VI secretion system protein, DotU family [Methylocella silvestris BL2] gi|217503874|gb|ACK51283.1| type IV / VI secretion system protein, DotU family [Methylocella silvestris BL2] Length = 494 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 8/148 (5%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 ++ L + K V T T I I + D +F + P+ + ++I + Sbjct: 350 QLQRIRLALAPEIAAKKVDATQTATKIRIIVGD---LVLFPSGQANVKPQFEPIAKRIAQ 406 Query: 258 VLAHSTEVISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L I+I GHTD + NW LS+ RA + VL K G+SE ++ G Sbjct: 407 TLEKEPGAITIVGHTDNVKLQATSPFDSNWTLSMARAKAVAAVL-KPGLSEPARIEVDGK 465 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDR 341 A + +D + NRR++I++ Sbjct: 466 ADEQPIAPNDTPAGRAQNRRVEIMLARS 493 >gi|294782148|ref|ZP_06747474.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA] gi|294480789|gb|EFG28564.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA] Length = 396 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 10/116 (8%) Query: 228 IIDQRNTPMFDKSSSIPL--PETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDN 284 +I+ + +FD PE VL+ + VL + I GHTD+ N Sbjct: 283 LINLDSEVLFDVDKYDVRVHPEAEEVLKNLAIVLKEMDVKNFEIDGHTDSD---GSDEYN 339 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 LS RA S L+ GV+ + G+ + ++D NRR++I++ Sbjct: 340 QVLSEKRANSVKNFLVSQGVTAE--ITTKGYGESKPVASNDTAEGKQKNRRVEIII 393 >gi|310781368|gb|ADP24154.1| outer membrane protein A [Bordetella avium] gi|310781370|gb|ADP24155.1| outer membrane protein A [Bordetella avium] Length = 198 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE VL ++ + + I GHTD+ N +LS RA + Sbjct: 92 FFDFDKSTIKPEGRQVLDQVADTVQSIDLETLIATGHTDSI---GAEAYNQKLSERRANA 148 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+ GV DRI G + ++ + NRR++I + + Sbjct: 149 VKAYLVNKGVPADRIYT-EGKGEAQPVASNKTREGRAQNRRVEIEIVGSR 197 >gi|307728583|ref|YP_003905807.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003] gi|307583118|gb|ADN56516.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003] Length = 620 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 20/192 (10%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + K+ +L + S + + + +G + ++ Sbjct: 407 DMARYRAIAPAEDAARVDALKAVKRDRDELERYASLGVPPRLGLGLYRGAPLQQPVNALI 466 Query: 226 ISII------------DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 S + + +F S++ P + VL E++ + + GHT Sbjct: 467 ASYQPPPPASVPPPTIELDSMSLFRSGSAVLNPGSNRVLIGALEMIKAHPDKRVLVAGHT 526 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NS 329 D+ N +LS RA S L + G++ R I G+ R K + + Sbjct: 527 DSV---GTPASNLKLSEARAASVRDWLADASGIALTRF-AIQGYGDTRPKAPNSTEAGRA 582 Query: 330 ANRRIDILVEDR 341 ANRR++I + Sbjct: 583 ANRRVEITLVPD 594 >gi|319778881|ref|YP_004129794.1| Outer membrane protein ImpK/VasF, OmpA/MotB domain protein [Taylorella equigenitalis MCE9] gi|317108905|gb|ADU91651.1| Outer membrane protein ImpK/VasF, OmpA/MotB domain protein [Taylorella equigenitalis MCE9] Length = 445 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 60/150 (40%), Gaps = 10/150 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + K+++ L + +N+ + ++ + F+ S+ + V+ Sbjct: 274 TEGPKRLAQYLESEIRENL---LTVRDESDRSVVELRGDE---FFESGSADIKKQFESVV 327 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++G+ L + I I GHTD P + NW LS RA + +++ +RI Sbjct: 328 NRLGDALDETEGNILITGHTDNRPIKTIRFPSNWDLSQARADAVAKIIESRLTQPNRIRS 387 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVE 339 G A ++D NRR++I + Sbjct: 388 -EGKADTMPVTSNDTPENRKRNRRVEITLL 416 >gi|311696932|gb|ADP99805.1| OmpA/MotB domain protein [marine bacterium HP15] Length = 341 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 120/346 (34%), Gaps = 25/346 (7%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 +I + T N Y D ++ L+ + M ++ + Sbjct: 1 MIGSRRRSRSTTNVWPG----YVDALSALLMLVIFMLLVYVVSQLYLSQTLSDRDTQLAR 56 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 L + + E S+ + NS+ ++ ST ++ Q + Sbjct: 57 LNAQLNELSELLGLEENRSEALENQLTSLQERNNSLVGQLESTREQLMRQTAMADAQSER 116 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + E + + + + ++ S+ ++ L ++ + +++ L+ + Sbjct: 117 LASMEESIDEKDDISASQQAMILRLSNQIASLREQLRQIASALELQEQMTADKEQELEQV 176 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGIL-----ISIIDQR----NTPMFDKSSSIPLP 246 ++++++ L+ V F IL + I+ R + +F +S+ Sbjct: 177 SRRLNTLLAERVNQLEQYQSEFFARLRDILAGNENVRIVGDRFLLPSELLFASASAELGE 236 Query: 247 ETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297 E L K+ ++L ++ I GHTD P NW LS RA + + Sbjct: 237 EGRQELDKLAKLLLDVSAKIPEDVDWILRIDGHTDVIPINTPRFPSNWELSTARAVAVVR 296 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 L GV E R+ +GF + NRRI++ + DR Sbjct: 297 YLAAQGVPERRM-AAAGFGEFFPVAEGTSPEALQRNRRIELKLTDR 341 >gi|150025962|ref|YP_001296788.1| OmpA family outer membrane protein [Flavobacterium psychrophilum JIP02/86] gi|149772503|emb|CAL43986.1| Probable outer membrane protein, OmpA family [Flavobacterium psychrophilum JIP02/86] Length = 710 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 91/287 (31%), Gaps = 24/287 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 G ++ K + N ++ + +D D T ++ K G + + + Sbjct: 429 GIDMHLGLKIPIYQGNKKDKDNDGVLDKFDDCPETAGPIENK-GCPWKDTDNDTVLDKDD 487 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 K D++K L + EN P L +K + + + Sbjct: 488 KCPTIAGPAKNKGCPYEDTDKDGVLDEDDKCINEAGPIENKGCPYLDTDKDGTLDKDDKC 547 Query: 193 ----------------QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 D + +K ++ + D T + Sbjct: 548 PTIVGDKENAGCPWPDTDGDSVLDKDDKCPTVKGTIKNNGCPEVTADVMKKLNDYAKTIL 607 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S S T VLQ I +L SI GHTD+ N LS RA + Sbjct: 608 FEVSKSSFQQRTFPVLQSILAILKEYPVAKFSIEGHTDSD---GKDTANQTLSETRAAAV 664 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L+K+G+ R++ GF + + NRR+++ + + Sbjct: 665 MAYLVKNGIDASRLAS-KGFGESKPIATNKTKVGKILNRRVEVKLVN 710 >gi|28901041|ref|NP_800696.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633] gi|153837129|ref|ZP_01989796.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810] gi|260362470|ref|ZP_05775403.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030] gi|260879890|ref|ZP_05892245.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034] gi|260894565|ref|ZP_05903061.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466] gi|260900439|ref|ZP_05908834.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037] gi|28809554|dbj|BAC62529.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633] gi|149749546|gb|EDM60292.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810] gi|308086367|gb|EFO36062.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466] gi|308092443|gb|EFO42138.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034] gi|308107064|gb|EFO44604.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037] gi|308113361|gb|EFO50901.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030] Length = 329 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 ++ T F+ S+ L L + + I G+TD+ A N +LS Sbjct: 211 EEYGTGTFEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 267 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + + +G+ DR+ + G + NRR++++V Sbjct: 268 ERRAQAVADYITGAGIDADRL-TVKGMGEENPVADNSTREGREKNRRVEVVV 318 >gi|300991173|ref|ZP_07179516.1| OmpA family protein [Escherichia coli MS 200-1] gi|300305611|gb|EFJ60131.1| OmpA family protein [Escherichia coli MS 200-1] gi|324015565|gb|EGB84784.1| OmpA family protein [Escherichia coli MS 60-1] Length = 211 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + E K +L K L +LA I++ + + E G+ + Sbjct: 4 PEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA---NLEMEIVPQGLRV 60 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 I D +N MF++ S+ +P +L ++ V I I GHTDA ++N +NW Sbjct: 61 LIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWN 120 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 LS DRA SA +VL ++G+ E+++ ++S A L A +P ++ NRRI+I+V + Sbjct: 121 LSGDRALSARRVLEEAGMPENKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 175 >gi|172062649|ref|YP_001810300.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6] gi|171995166|gb|ACB66084.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 228 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 8/131 (6%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRG 270 + GI I I + +F+ + LP+ VL +I L+ T I + G Sbjct: 100 NGRISLVRAPHGIEIGIDAK---ILFNVGDARLLPDATPVLSEIARALSEHATGDILVEG 156 Query: 271 HTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PM 327 HTD++P N NW LS RA S + L GV+ R++ I G A + +ASD P Sbjct: 157 HTDSAPIANAKYESNWELSSARAGSVVRYLADRGVAPHRLAAI-GRADTQPLVASDDAPA 215 Query: 328 NSANRRIDILV 338 + NRR+ I V Sbjct: 216 RARNRRVTIFV 226 Score = 47.7 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIIN 55 + G W I YAD +T LM FL ++++ Sbjct: 21 EAEGAQSGRWLISYADLITTLMVLFLALYVLQ 52 >gi|254303029|ref|ZP_04970387.1| OmpA family membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323221|gb|EDK88471.1| OmpA family membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 386 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 80/259 (30%), Gaps = 10/259 (3%) Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 DE +R+ + + E VD + + + + + E+ Sbjct: 130 DENLTIKRNKDGSGEYTNKETGVTLQVDAQGSGQYLDDKNKVSFQIAADGTGVYKDENDD 189 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 ++T + ++ + + Y K K + K Sbjct: 190 VTITIAENSSTYTKGNITVKNNDDGSGTYNDKDKDLLIENDGKGKAIITLKEKSTEVEAK 249 Query: 205 GLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L + I + +I + +FD PE L + VL + Sbjct: 250 PLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDVRPEAERALASLATVLKEA 309 Query: 263 T-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 + I GHTD+ N LS RA + L G++ + I G+ R Sbjct: 310 DVKAFEIDGHTDSD---ASDEYNQALSEKRANAVKDFLASQGLTSE--ITIIGYGESRPV 364 Query: 322 IASDPMNS--ANRRIDILV 338 ++D NRR++I++ Sbjct: 365 ASNDTPEGKQKNRRVEIII 383 >gi|298209046|ref|YP_003717225.1| putative flagellar motor protein MotB [Croceibacter atlanticus HTCC2559] gi|83848973|gb|EAP86842.1| putative flagellar motor protein MotB [Croceibacter atlanticus HTCC2559] Length = 286 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 96/249 (38%), Gaps = 10/249 (4%) Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 DL + T++ ++ N + + Q ++ + + KG Sbjct: 25 ADLEAQQQETQDRLNTATVKLNSCLEEKAGATAKANALEDQVADLRRTNADLIETKGNLT 84 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 +T ++ K + K L ++ + + ++L G + + + + Sbjct: 85 TLTTKGATNLEKSLESLKEKDLQIKTLRDAVTRK-DSVTLALVTSLKGALGNMADEDIEI 143 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASP 276 + + +SI D+ +F S VL K+ V+ ++ + GHTD P Sbjct: 144 NVEKGVVYVSISDKL---LFKSGSYNVTSRAKEVLGKVATVVNAKPDIEFMVEGHTDNVP 200 Query: 277 FRNIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 +N DNW LS RA S ++L + GV R++ G +++ ++D + NR Sbjct: 201 IKNAVLEDNWDLSAKRATSVVRILQDEYGVPPQRMTAA-GRSYYIPVASNDTAEGRAKNR 259 Query: 333 RIDILVEDR 341 R I+V + Sbjct: 260 RTRIVVLPK 268 >gi|229029408|ref|ZP_04185491.1| OmpA/MotB domain protein [Bacillus cereus AH1271] gi|228731867|gb|EEL82766.1| OmpA/MotB domain protein [Bacillus cereus AH1271] Length = 227 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 81/226 (35%), Gaps = 9/226 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + + Sbjct: 6 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDVEQVDAKVMENTI 65 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + + L V N + V TG+ + I+D +FD Sbjct: 66 PDISHEKNDEKMISKKRMDDLYKKLKAYVDSNGISQVNVYREDTGVSVVIVDNL---IFD 122 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297 + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 182 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 183 HLIEVYNVEDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 227 >gi|328473467|gb|EGF44315.1| outer membrane protein OmpA [Vibrio parahaemolyticus 10329] Length = 319 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T FD +S+ PE+ L + L + + + G+TD A N ++S R Sbjct: 206 GTGSFDLNSTTLKPESASKLDNLVAFLNEHPQAKVEVVGYTDT---SGAAAYNQKVSEKR 262 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A S L++ G+ RI G + ++D NRR++I+V Sbjct: 263 AESVANALVEKGIDASRIQA-RGEGENNPIASNDTREGRQQNRRVEIVV 310 >gi|268595437|ref|ZP_06129604.1| ompA family protein [Neisseria gonorrhoeae 35/02] gi|268597225|ref|ZP_06131392.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268599401|ref|ZP_06133568.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae MS11] gi|268601994|ref|ZP_06136161.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID18] gi|268604326|ref|ZP_06138493.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID1] gi|268682782|ref|ZP_06149644.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID332] gi|268684809|ref|ZP_06151671.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae SK-92-679] gi|268687209|ref|ZP_06154071.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae SK-93-1035] gi|268548826|gb|EEZ44244.1| ompA family protein [Neisseria gonorrhoeae 35/02] gi|268551013|gb|EEZ46032.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268583532|gb|EEZ48208.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae MS11] gi|268586125|gb|EEZ50801.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID18] gi|268588457|gb|EEZ53133.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID1] gi|268623066|gb|EEZ55466.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID332] gi|268625093|gb|EEZ57493.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae SK-92-679] gi|268627493|gb|EEZ59893.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae SK-93-1035] Length = 216 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L + + + I + + + F S+ L + Sbjct: 67 YMDYQEQRLRQNLAGTQIEIQRQGNQIRLVMPESVT---FATGSAALGGSAQYALNTAAQ 123 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +I GHTD + N LS RA + L GV+ R+ + G+ Sbjct: 124 TLVQYPDTTLTINGHTDNT---GSDAVNNPLSQHRAQAVAYYLQTRGVAASRL-TVYGYG 179 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 H ++ + NRR++IL+ Q Sbjct: 180 SHMPVASNATVEGRAQNRRVEILINPDQ 207 >gi|238784596|ref|ZP_04628602.1| Lateral flagellar proton motor protein B [Yersinia bercovieri ATCC 43970] gi|238714465|gb|EEQ06471.1| Lateral flagellar proton motor protein B [Yersinia bercovieri ATCC 43970] Length = 256 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 4/230 (1%) Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + + S ++++ N S + + + +++ + Sbjct: 3 VGVVSEEERQEIVAQLNGETIFDKQSYISIPSKSKSGGGKFSDSIDGHEQAKETKSNLAV 62 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P + + K K +++L++ I S + + E G+ I I D + Sbjct: 63 EVPEPEQSLEEVVDKSGKEMEELSRIIMQITSTY---DAQSNLKMEVVPQGLRILIQDDK 119 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDR 291 MF +SS++ P +L ++ I I GHTDAS +R+ +NW LS +R Sbjct: 120 QRDMFQRSSALLTPFFSRLLAELAPAFNEMDNKIIITGHTDASRYRDQVRYNNWNLSGER 179 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 A A++ L+K G+SE+R+ +I+ A L ++P+ ++NRRI+I+V + Sbjct: 180 ALMAHKALVKGGLSEERVLQINAMADQMLLTPTEPLAASNRRIEIMVLTK 229 >gi|170720328|ref|YP_001748016.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619] gi|169758331|gb|ACA71647.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 230 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ S+ P L I L + +S+ GHTD+ N LS RA+S Sbjct: 126 FEFDSARLTPADKERLNTISTRLKQEAPSARLSVTGHTDSV---GSDSYNQNLSERRAHS 182 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L++SGV + G + + + NRR +I +E Sbjct: 183 VTDYLVESGVPRASFVSVVGAGETQPVADNATADGRSMNRRTEIKIER 230 >gi|77164341|ref|YP_342866.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707] gi|254434085|ref|ZP_05047593.1| Rickettsia 17 kDa surface antigen family [Nitrosococcus oceani AFC27] gi|76882655|gb|ABA57336.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707] gi|207090418|gb|EDZ67689.1| Rickettsia 17 kDa surface antigen family [Nitrosococcus oceani AFC27] Length = 248 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 12/151 (7%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + D +++ + L+ + ++ + + D + FD S + P + Sbjct: 81 MNDQQREMEAALAEERRGHQLEIQRLQDESLKL-----DIPSEISFDHDSDVLKPAFLPT 135 Query: 252 LQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L KI EVL V+ + GHTD++ + N LSL RA + + GV R+ Sbjct: 136 LDKIAEVLKKYNKTVVHVIGHTDST---GSEKYNLDLSLRRAGNVAVYFERKGVPSQRL- 191 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVE 339 I G + ++ NRR++I+++ Sbjct: 192 SIYGRGESEPRASNATAAGRQLNRRVEIILK 222 >gi|28897538|ref|NP_797143.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633] gi|153839084|ref|ZP_01991751.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810] gi|260364598|ref|ZP_05777200.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030] gi|260878297|ref|ZP_05890652.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034] gi|260898127|ref|ZP_05906623.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466] gi|260901940|ref|ZP_05910335.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037] gi|28805750|dbj|BAC59027.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633] gi|149747422|gb|EDM58382.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810] gi|308086135|gb|EFO35830.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466] gi|308090168|gb|EFO39863.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034] gi|308106787|gb|EFO44327.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037] gi|308115125|gb|EFO52665.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030] Length = 319 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T FD +S+ PE+ L + L + + + G+TD A N ++S R Sbjct: 206 GTGSFDLNSTTLKPESASKLDNLVAFLNEHPQAKVEVVGYTDT---SGAAAYNQKVSEKR 262 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A S L++ G+ RI G + ++D NRR++I+V Sbjct: 263 AESVANALVEKGIDASRIQA-RGEGENNPIASNDTREGRQQNRRVEIVV 310 >gi|262068012|ref|ZP_06027624.1| OmpA family protein [Fusobacterium periodonticum ATCC 33693] gi|291378280|gb|EFE85798.1| OmpA family protein [Fusobacterium periodonticum ATCC 33693] Length = 212 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 10/149 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L A +++++ F S+ L + Sbjct: 71 AYKDNQARELKAALKGTQAEVRNDGNALVVNL---PGGVTFASDSANISSGFYSALNGVA 127 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + L E I + G+TD++ N LS RA + Q + GVS +RI +GF Sbjct: 128 QTLVKYPETRIQVNGYTDST---GGDAHNLDLSQRRANAVAQYFIAQGVSSNRIVA-NGF 183 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342 ++ NRR+++ + Q Sbjct: 184 GSSNPIASNATPEGRQANRRVEVRILPAQ 212 >gi|85058002|ref|YP_453704.1| flagellar motor protein MotB [Sodalis glossinidius str. 'morsitans'] gi|84778522|dbj|BAE73299.1| chemotaxis protein MotB [Sodalis glossinidius str. 'morsitans'] Length = 341 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 7/223 (3%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK--STDLEKSINKEENYFLPPLSKEKI 183 + + + Q+ + E K ++ ++ ++ L L + ++ Sbjct: 41 MVMWMLGATTPQQREQIADYFKMPLKEALTHNGKFNMGNIPLPVDAKDTDGLTRLRQREL 100 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + +RL++ ++ L + + G+ I IID + PMF + Sbjct: 101 EHQRDIQRLKNTRHRLEQMLRNDPRLRELQPNMRITLVHDGLRIEIIDSKKRPMFATGGT 160 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLM 300 P +L+ I VL + IS+ GHTD P+ N NW LS DRA ++ + L+ Sbjct: 161 AIAPYMRSILRIIAPVLDNLPNRISLAGHTDNQPYLNGERGYGNWELSTDRANASRRELV 220 Query: 301 KSGVSEDRISKISGFAHHR-LKIASDPMNSANRRIDILVEDRQ 342 + G++ D+I ++ G A+ D + RRI I++ R+ Sbjct: 221 EGGLAGDKILRVIGMANTMAPAGKVDDNAAQ-RRISIVILTRE 262 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 43/88 (48%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 ++ K + + +GSWKI YADFMT +MAFF+VMW++ AT ++ I YF Sbjct: 3 KPSPPVVIKWRRAQNANHYVGSWKIAYADFMTAMMAFFMVMWMLGATTPQQREQIADYFK 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKI 98 K +T + P +++ Sbjct: 63 MPLKEALTHNGKFNMGNIPLPVDAKDTD 90 >gi|50120622|ref|YP_049789.1| flagellar motor protein [Pectobacterium atrosepticum SCRI1043] gi|49611148|emb|CAG74594.1| chemotaxis protein [Pectobacterium atrosepticum SCRI1043] Length = 351 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 4/203 (1%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 K +LT S+ +++ + + + + RL L +++ + Sbjct: 65 KVALTSGSKSSDSSSPIPGGGNDPTQQDGEVRKAIKTDNVEKKLDEVRLNRLRERLDQLI 124 Query: 204 SGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + +L E G+ I IID +N PMF S+ P +L+ I ++ Sbjct: 125 EADPRLRALRPHLLIEMIEEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIAPIMNDF 184 Query: 263 TEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 +SI GHTD + NW LS DRA ++ + L+ G+S+ ++ ++ G A Sbjct: 185 PNKLSISGHTDDVQYTTGERGYSNWELSADRANASRRELIWGGLSDGKVLRVVGMAATMS 244 Query: 321 KIASDPM-NSANRRIDILVEDRQ 342 + ++ NRRI +LV RQ Sbjct: 245 LKQAASGNDAINRRISLLVLSRQ 267 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 Q II+KK ++ GSWKI YADFMT +MA FLVMW+I + I +YF Sbjct: 2 KHQHPIIRKKRKSGHGGHHGGSWKIAYADFMTAMMALFLVMWLIAISTPMQLAQIAEYFR 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 K +T+ D +P + + + +++ + R + Sbjct: 62 TPLKVALTSGSKSSDSSSPIPGGGNDPTQQDGEVRKAIKTDNVEKKLDEVRLNRLRERLD 121 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 ++ + + L E+G + + + K + + P ++ + A+ Sbjct: 122 QLIEADPRLRALRPHLLIEMIEEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILRAIA 178 >gi|237738475|ref|ZP_04568956.1| outer membrane porin F [Fusobacterium mortiferum ATCC 9817] gi|229420355|gb|EEO35402.1| outer membrane porin F [Fusobacterium mortiferum ATCC 9817] Length = 185 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 10/133 (7%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 +GV+ +++S+ +FD SS L +G+ LA + ++ I GH Sbjct: 57 EGVVIRKDGNNLVLSM---PVEILFDFDSSKVKEGVKESLNTLGKALAENKDIKLKIDGH 113 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329 TD + + N LSL RA S L+ GVS + I I G+ + + Sbjct: 114 TD---YIGTEQYNLNLSLKRANSIKNYLIGRGVSANNI-SIEGYGKQNPVANNSTEAGRA 169 Query: 330 ANRRIDILVEDRQ 342 NRR++ ++ + Sbjct: 170 KNRRVEFIISRDK 182 >gi|194288765|ref|YP_002004672.1| replication/virulence associated protein; outer membrane protein, ompa family membrane protein [Cupriavidus taiwanensis LMG 19424] gi|193222600|emb|CAQ68603.1| replication/virulence associated protein; putative outer membrane protein, OmpA family membrane protein [Cupriavidus taiwanensis LMG 19424] Length = 425 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + T I+ MF + + + + +L K+ ++ T Sbjct: 292 LRDEIARGVVSVQEDATRSAITFRGDD---MFGRGRADVSEKILPLLDKVAAEVSKVTGK 348 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD P + N LS +RA + + L GV+++R+ I G + + Sbjct: 349 VTVIGHTDNVPIKTAKYPSNQALSEERAATVAEYLASKGVAKNRLEAI-GKGDSQPLADN 407 Query: 325 DP--MNSANRRIDILVED 340 + NRR++I+V Sbjct: 408 KAPVGRARNRRVEIVVTQ 425 >gi|56698398|ref|YP_168771.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3] gi|56680135|gb|AAV96801.1| OmpA domain protein [Ruegeria pomeroyi DSS-3] Length = 221 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 71/198 (35%), Gaps = 10/198 (5%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 T ++K K + + P A + + + L Sbjct: 31 TDPNQKAKQGALIGGILGAGVGAIANDSNPGLGALAGAAIGAAGGGLIGNSLDKQAAELR 90 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI- 266 + G+ T +++S+ + FD SS P LQK+ L + Sbjct: 91 QELANDGITITNTGDRLIVSVPNDIT---FDTDSSTVRPGLRSDLQKVAAHLVRYPQSSV 147 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + GHTD+ A N LS RA + +L GV+ DRIS + G + ++ Sbjct: 148 QVIGHTDSD---GEAAYNQGLSERRAGAVADILQAGGVTYDRISTL-GMGENSPIASNLT 203 Query: 327 MN--SANRRIDILVEDRQ 342 + NRR++I+V R Sbjct: 204 PEGKARNRRVEIVVIPRN 221 >gi|294782159|ref|ZP_06747485.1| OmpA family protein [Fusobacterium sp. 1_1_41FAA] gi|294480800|gb|EFG28575.1| OmpA family protein [Fusobacterium sp. 1_1_41FAA] Length = 212 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 52/149 (34%), Gaps = 10/149 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L A +++++ F S+ L + Sbjct: 71 AYKDNQARELKAALKGTQAEVRNDGNALVVNL---PGGVTFASDSANISSGFYSALNGVA 127 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + L E I + G+TD++ N LS RA S Q L+ GVS +RI +GF Sbjct: 128 QTLVRYPETRIQVNGYTDST---GGDAHNQELSQRRANSVAQYLISQGVSSNRIVA-NGF 183 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342 ++ NRR+++ + Q Sbjct: 184 GSLNPIASNATPEGRQANRRVEVRILPAQ 212 >gi|222081943|ref|YP_002541308.1| OmpA/MotB domain protein [Agrobacterium radiobacter K84] gi|221726622|gb|ACM29711.1| OmpA/MotB domain protein [Agrobacterium radiobacter K84] Length = 494 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 69/230 (30%), Gaps = 9/230 (3%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 K +N S + + + + + + + Sbjct: 269 PDDDAHGKIIDAAKNLFSSDEISDELKAAPGAPNGFATAALGGLNALSRLAKGSFSLSGT 328 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI--VKGVLFETTRTGILISIIDQR 232 LS E + K A I A+ + L++ I + Sbjct: 329 DAKLSGEALYNGAVKSIQDSFAAAIPEGFKATPAEIAVSAPAAAVDAPNCQSLLNTILTK 388 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + FD + P + VL I + + + GHTD+ N LS R Sbjct: 389 SKINFDTGKARISPASSGVLDTIVATIGRCPGNAVEVSGHTDS---SGDEAANVALSEQR 445 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 A + L +GV R++ + G R ++D NRRI+ V+ Sbjct: 446 AKAVVTYLTDAGVPASRLTAV-GLGSSRPVASNDTDEGKALNRRIEFSVK 494 >gi|213416605|ref|ZP_03349749.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 170 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 2/130 (1%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274 + + + G+ I IID +N PMF S+ P +L+ I VL IS+ GHTD Sbjct: 1 MKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDD 60 Query: 275 SPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332 P+ N NW LS DRA ++ + L+ G+ ++ ++ G A P ++ NR Sbjct: 61 FPYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDDAINR 120 Query: 333 RIDILVEDRQ 342 RI +LV ++Q Sbjct: 121 RISLLVLNKQ 130 >gi|77462842|ref|YP_352346.1| hypothetical protein RSP_2289 [Rhodobacter sphaeroides 2.4.1] gi|77387260|gb|ABA78445.1| Outer membrane protein, OmpA/MotB family [Rhodobacter sphaeroides 2.4.1] Length = 525 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 95/297 (31%), Gaps = 16/297 (5%) Query: 58 DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 + A+ + + + R+ + + +++ + G Sbjct: 232 SETELTAMTLALEEQRRKAEETLTLLAAAKTDAARAVSEADQRAAALAAAREALNAREGE 291 Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + + L N +Q ++ + + L +N Sbjct: 292 GAEAARRVALLNEQVAALRAQLGSLQGLLEAAEAHDSANNVQLQSLGTQLNSALAQVASE 351 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + L + RL+ K ++ S + VL ++ + +F Sbjct: 352 QKRRAELEEAERLRLEAENKDLARFRSEFFGQL--RQVLAGREGVRVVGDRFVFSSEVLF 409 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRN--IARDNWRL 287 + S+ PE + + + L +I + GHTD P RDNW L Sbjct: 410 EPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFGAFRDNWEL 469 Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 S RA S + + +S G R+ +GF +R D + NRRI++ + +R Sbjct: 470 SSARALSVVRFMQQSLGFPPSRL-AATGFGEYRPVTPGDSPDARAQNRRIELKLTER 525 >gi|295699895|ref|YP_003607788.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] gi|295439108|gb|ADG18277.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] Length = 410 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 8/114 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + +FD + P + + E++ + + GHTD + N +LS Sbjct: 296 DSMSLFDSGRAQLKPGSTRAMVDALEMIKAHPDKRILVAGHTDNV---GNPQSNLKLSTA 352 Query: 291 RAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 RA + L+ SG++E + I G+ R ++ D + NRR++I + Sbjct: 353 RAQAVRDWLIDVSGIAETQF-AIQGYGDTRPIASNASDDGRARNRRVEITLVPD 405 >gi|254524919|ref|ZP_05136974.1| outer membrane protein [Stenotrophomonas sp. SKA14] gi|219722510|gb|EED41035.1| outer membrane protein [Stenotrophomonas sp. SKA14] Length = 363 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 16/160 (10%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L D +++ + + + + I + FD S P+ + Sbjct: 211 ADLDDDGDGVNNCDDKCPNSQPGQTIGPDGCPVPVSIDL----KGVNFDFDKSNLRPDAV 266 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + E+L + + + GHTD+ + N +LS RA + Y L K+GV R Sbjct: 267 AILGEATEILKRYPDLRVEVAGHTDS---KGTDAYNQKLSERRATAVYNYLTKNGVDAGR 323 Query: 309 ISKISGFAHHRLKIASD--------PMNSANRRIDILVED 340 + G+ R + + NRR ++ V++ Sbjct: 324 LIGPVGYGKSRPIAPNTNPDGSDNPEGRAKNRRTELNVQN 363 >gi|260767782|ref|ZP_05876717.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972] gi|260617291|gb|EEX42475.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972] Length = 332 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 15/163 (9%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + M ++ + + + K V + ++ F Sbjct: 173 DNQPAPVMAEEQPVAEPQPVVEQAPVQEPVAAAPKMVTKTVAFQKL--------DSKSFA 224 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 +S+ E L + L + + I GHTD++ N +LS RA Sbjct: 225 HNSAKMSEEGKAQLGDLVAFLNEHPQANVEITGHTDST---GAEAYNQKLSEKRAQGVSD 281 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L + G+ RI+ G ++ NRR++I++ Sbjct: 282 ALQEQGIDAARITA-KGEGESNPIASNATAAGREQNRRVEIVI 323 >gi|313205587|ref|YP_004044764.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868] gi|312444903|gb|ADQ81258.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868] gi|315022683|gb|EFT35708.1| OmpA/MotB domain protein [Riemerella anatipestifer RA-YM] gi|325334983|gb|ADZ11257.1| Outer membrane protein related peptidoglycan-associated (lipo)protein [Riemerella anatipestifer RA-GD] Length = 230 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 7/120 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I I NT F S+ L K+ +VL ++ + I++ GHTD+ N Sbjct: 105 IKITLNENTVNFGFDSANLTSVAKTNLDKLAQVLKNNPDTNINVYGHTDSR---GADDYN 161 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 RLS RA + L G++ R+ G ++D + NRR++ + + Sbjct: 162 LRLSERRANAVVSYLSSLGIASSRMIA-KGVGEAEPIASNDTDEGRAKNRRVEFAITANE 220 >gi|161504616|ref|YP_001571728.1| hypothetical protein SARI_02730 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865963|gb|ABX22586.1| hypothetical protein SARI_02730 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 574 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD S + +L + I + GHTD + + N LSL Sbjct: 440 DSMSLFDSGKSALKAGSTRMLVNSLVGIKAKPGWLIVVSGHTDNT---GNPKLNQTLSLK 496 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + + +G + + G+ R +D + NRR++I + Sbjct: 497 RAEAVRNWMRDTGDVPESCFAVQGYGESRPIATNDTPEGRALNRRVEISL 546 >gi|47566111|ref|ZP_00237149.1| sodium-driven polar flagellar protein PomB, putative [Bacillus cereus G9241] gi|47557028|gb|EAL15358.1| sodium-driven polar flagellar protein PomB, putative [Bacillus cereus G9241] Length = 225 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 85/226 (37%), Gaps = 10/226 (4%) Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + Q + + L S++ + S ++ + + + Sbjct: 4 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDTVKLSKMLEKFSDAEQVDAKVMGNTI 63 Query: 181 EKILAMKRKKRLQDLAKK--ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 I K +++ + + L V +N + V TG+ + I+D +FD Sbjct: 64 PDISHEKNDEKMASKKRMDDLYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 120 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQ 297 + PE ++ K+ I + GHTD+ P N NW LS RA + Sbjct: 121 TGDANVKPEAKEIISKLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANMIH 180 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L++ V + R++ + G+A + + +D NRR+ I +++ Sbjct: 181 HLIEVYNVEDKRLAAV-GYADTKPVVPNDSPQNWEKNRRVVIYIKE 225 >gi|110638825|ref|YP_679034.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110281506|gb|ABG59692.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 320 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 7/116 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 + + +F+ S + + + L + +VL ++ + I GHTD N Sbjct: 209 LQKAFDNLLFETGSDVIVSSSFQSLDDLAKVLRNNPLYNLYIEGHTDNV---GDDEANLD 265 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 LS RA S L+ GV R++ GF R +D NRR+++ + Sbjct: 266 LSKRRAISVKNYLVSKGVGAARLTT-DGFGEARPVDTNDTPEGRKKNRRVEMHILQ 320 >gi|260432355|ref|ZP_05786326.1| inner membrane lipoprotein YiaD [Silicibacter lacuscaerulensis ITI-1157] gi|260416183|gb|EEX09442.1| inner membrane lipoprotein YiaD [Silicibacter lacuscaerulensis ITI-1157] Length = 223 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 70/202 (34%), Gaps = 10/202 (4%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 ++ K L + P A + ++ Sbjct: 23 DPGTLRVQDDPNQNAKQGAILGGLIGAGVGAIANDSDPGLGALAGAAIGAAGGGLIGNQL 82 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L G+ +++++ + FD S+ P L ++G+ L Sbjct: 83 DRQAAELRQQLANDGITIVNAGDRLIVTVPNDIT---FDTDSATVRPALRADLVRVGQNL 139 Query: 260 AHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + I GHTD+ A N LS RA + +L +GVS RI+ I G + Sbjct: 140 VNYPKSNVQIIGHTDSD---GDAGYNQALSERRASAVADILHANGVSYARITTI-GRGEN 195 Query: 319 RLKIASDPMN--SANRRIDILV 338 + ++ + NRR++I++ Sbjct: 196 QPIASNLTPEGKAQNRRVEIVI 217 >gi|260886728|ref|ZP_05897991.1| chemotaxis protein MotB [Selenomonas sputigena ATCC 35185] gi|330839448|ref|YP_004414028.1| OmpA/MotB domain protein [Selenomonas sputigena ATCC 35185] gi|260863580|gb|EEX78080.1| chemotaxis protein MotB [Selenomonas sputigena ATCC 35185] gi|329747212|gb|AEC00569.1| OmpA/MotB domain protein [Selenomonas sputigena ATCC 35185] Length = 303 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 78/207 (37%), Gaps = 9/207 (4%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 ++ K + + + E+ ++ E + + L + Sbjct: 41 ATDSSKMAQMAQAFTAAFNTGGPSFFSQMGPSESRHAERVATEDKGNSAYIQEAKALEEV 100 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + + + + T G++I I ++ +F S+ + E + + + Sbjct: 101 QKELDNYIKQNGLQGELNTTMTDDGLMIRIKEK---ALFPSGSAELVGEAQKIGPVVAGL 157 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGF 315 LA E + I GHTD P NW LS RA + + L S ++ R S I G+ Sbjct: 158 LAKIPERVVISGHTDNVPIATARYPSNWELSSQRALNFMKFLFASNTSLNPARFSSI-GY 216 Query: 316 AHHRLKIAS--DPMNSANRRIDILVED 340 + +R + D S NRR+++L+ Sbjct: 217 SEYRPIADNKTDEGRSQNRRVEVLIAR 243 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 33/96 (34%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +KK +W + Y+D MT+L+A F+ ++ ++ATD + Q F Sbjct: 1 MARKKRHAPHEEEAGEAWLLPYSDLMTLLLATFIALYAMSATDSSKMAQMAQAFTAAFNT 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111 + D +I + Sbjct: 61 GGPSFFSQMGPSESRHAERVATEDKGNSAYIQEAKA 96 >gi|260549981|ref|ZP_05824196.1| OmpA family protein [Acinetobacter sp. RUH2624] gi|260406973|gb|EEX00451.1| OmpA family protein [Acinetobacter sp. RUH2624] Length = 472 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 34/275 (12%), Positives = 84/275 (30%), Gaps = 8/275 (2%) Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 P A+ + ++ + ++ I + ++ ++ + + Sbjct: 200 ETTPASGVAAAAAAPATLTLSTDDKGAVSQCQAGIGDQGFLATLQTQVKKVLSGTKDCNV 259 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + + Y + + L + + ++ + L L+ + + Sbjct: 260 DTSQTYAAAFTDKDALAGVLGALKGVPNASLEWVGDKITLKAGDAAALEALTAKVKALVP 319 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLP 246 + + + ++S + + + + + F SS Sbjct: 320 HTEVVSAAPQTAEQSVSNSLTASQTALGSIDPNNVDVNALVKALNLQIINFASGSSEIPA 379 Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + +L + +L T V ++ GHTD++ A N LS RA + L+ GV Sbjct: 380 DNKAILDQAATLLNKVTSVKLNVGGHTDST---GNAAANKALSQRRAQAVVDYLVSKGVD 436 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 ++ G + NRRI+ V Sbjct: 437 ASKLVA-QGHGSENPVAENTTEEGRFKNRRIEFSV 470 >gi|330998481|ref|ZP_08322305.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841] gi|329568587|gb|EGG50392.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841] Length = 292 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 77/213 (36%), Gaps = 9/213 (4%) Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 + ++ K S + + + +K ++ K + Sbjct: 64 AEAQKANDELKASYAALQGSLDKSIQQNSQGNVNISKLVDEINASNKFIKQLVEAKDKSD 123 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 L +++ L+ ++ +K V + + + IS+ D ++ S L Sbjct: 124 SLNMVLTNNLTRSLSREEMKDVDVQVLKGVVYISLADNM---LYKSGSYEISERAGETLS 180 Query: 254 KIGEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMK-SGVSEDRIS 310 KI +++ E + I G+TD P R+NW LS RA S Q L GV R++ Sbjct: 181 KIAKIIMDYKEYEVLIEGNTDTDPISRPNIRNNWDLSTLRASSVVQALQNTYGVDPKRLT 240 Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 G + ++D NRR I++ + Sbjct: 241 AA-GRGEYNPVASNDTPEGKMRNRRTQIIITPK 272 >gi|308274998|emb|CBX31597.1| hypothetical protein N47_E51090 [uncultured Desulfobacterium sp.] Length = 315 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 84/224 (37%), Gaps = 11/224 (4%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + + + + L S+ E + ++ D+ + + + E L Sbjct: 94 EAEVERLNQERNRILMESRSLEAKQANIKADASTKEANQAKMMAIEKAQQLEIKQQEALE 153 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + K L + +++ + + + + + T GI++++ D +F Sbjct: 154 QMKKLELAKQESQAMSLEAEQARKKAAELKAEIDKLQAKQTDRGIVLTLGD----VLFAN 209 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + + P + + ++ E L E + + GHTD+ N LS RA + Sbjct: 210 NKANLQPGAMRTIDQLAEFLKKHAERMVVIEGHTDSR---GSDTYNLGLSQRRADAVRDA 266 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L+ G+ + RI I G ++D NRR++I++ + Sbjct: 267 LVARGIDQARIQTI-GKGEVYPVASNDTSAGRQQNRRVEIIISN 309 >gi|319783265|ref|YP_004142741.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169153|gb|ADV12691.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 216 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 10/143 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + L GV + I++++ F+ P VL + V Sbjct: 77 MDQNEAELRRQLEGTGVSVTRSGDQIILNMPSDIT---FNSDQDAVKPGFYQVLNSVALV 133 Query: 259 LAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + GHTD++ + N+ LS RA + L GV + R ++GF Sbjct: 134 LKKFKQTTVDVFGHTDST---GGDQHNFDLSQRRALAVANYLSGQGVDQRRF-AVTGFGK 189 Query: 318 HRLKIASDPM--NSANRRIDILV 338 R ++ + NRR++I + Sbjct: 190 TRPVASNATAEGRAQNRRVEIQL 212 >gi|94496613|ref|ZP_01303189.1| OmpA/MotB [Sphingomonas sp. SKA58] gi|94423973|gb|EAT08998.1| OmpA/MotB [Sphingomonas sp. SKA58] Length = 226 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 10/199 (5%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 N+ R K L + + +++ + A + + + Sbjct: 25 DPNTGQRSISKAAIGGIGGALGGYLLGDLVGGRNDRTEKILGAGIGAVAGAGIGAYMDAQ 84 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L + GV +L+ + + F + P+ L + VLA Sbjct: 85 ERKLREETAGTGVDVIRDGDNLLLRM---PSGITFGYDRADVQPQFQPTLNDVASVLAQY 141 Query: 263 T-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I + GHTD+ N LS RA + L+ GV RI GF + Sbjct: 142 PKTYIDVYGHTDSD---GSDAYNQTLSERRAQAVANYLVGRGVQSARIGT-RGFGETQPI 197 Query: 322 IASDPMN--SANRRIDILV 338 ++ +ANRR++I + Sbjct: 198 ASNATEEGKAANRRVEIKI 216 >gi|299145942|ref|ZP_07039010.1| OmpA family protein [Bacteroides sp. 3_1_23] gi|298516433|gb|EFI40314.1| OmpA family protein [Bacteroides sp. 3_1_23] Length = 297 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 93/244 (38%), Gaps = 10/244 (4%) Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163 TK + + ++ R + L+ +Q++ D + + + Sbjct: 31 TDYTKLQTEYQESQLQLRENQARSTSLEERLAEAQRNNSELRKSLSDMQSILNKSLTQSS 90 Query: 164 EKSINKEENYFLPPLSKEKILAM-KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + ++N + S I + K K R L + + L+ + ++ + + + Sbjct: 91 QGNMNMGKLIDEINASNRFIQHLVKEKNRSDSLNLVMVNKLTRSLTREEMRDLDIKVLKG 150 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNI 280 + IS+ D ++ S + VL KI +++ + + G+TD P R Sbjct: 151 VVYISLADNM---LYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTN 207 Query: 281 ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 R+NW LS RA S Q L G++ R++ G +D + NRR +I+ Sbjct: 208 IRNNWDLSALRASSVVQALQNVYGINPKRLTAA-GRGEFNPVAGNDTAEGKARNRRTEII 266 Query: 338 VEDR 341 + + Sbjct: 267 ITPK 270 >gi|282858415|ref|ZP_06267595.1| OmpA family protein [Prevotella bivia JCVIHMP010] gi|282588863|gb|EFB93988.1| OmpA family protein [Prevotella bivia JCVIHMP010] Length = 287 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 78/215 (36%), Gaps = 14/215 (6%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 Q + S S + + + ++ ++ K + L Sbjct: 58 EDQLTQARESAAALQGSLDKSLTSANSNNINISKLVDQINESNQYIRHLVEVKSKSDSLN 117 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L+ ++ +K V + + + IS+ D ++ S L KI Sbjct: 118 MALQNNLTRSLSKEELKEVDVQVLKGVVYISLADNM---LYKSGSYEINDRAEQTLSKIA 174 Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRAYSAYQVLMKS-GVSEDR 308 ++++ + I G+TD P R+NW LS RA S + L + GV+ R Sbjct: 175 KIISDYNDYDVLIEGNTDNVPINTANKMMTNIRNNWDLSALRATSVAKYLQEHFGVNPKR 234 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 I+ G + +A++ NRR I++ + Sbjct: 235 ITAG-GRGEYNPLVANNTELGRQRNRRTQIIITPK 268 >gi|323529927|ref|YP_004232079.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001] gi|323386929|gb|ADX59019.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001] Length = 321 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 37/281 (13%), Positives = 83/281 (29%), Gaps = 14/281 (4%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 ++ + ++ N +S + + + G + Sbjct: 42 VDNSSMSIRTTALPSASSSAPALNTAGLASGTTGAGTGAVTASPPPANATPGQVVVGGKV 101 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 L+ + + N + + + + KI Sbjct: 102 PDEATKAAVLARLRDTYGAANVVDQIEVADVATPPNWSANVQKLIGPQLKQISKGQLKID 161 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKG------VLFETTRTGILISIIDQRNTPMFD 238 + + + + L+ +A+ + + + G+L + R F+ Sbjct: 162 GTQIDVKGEVRNESQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIE-FE 220 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ P+ +L ++ + T I GHTD N LS RA + Sbjct: 221 TGSATLTPQGRAILDQMAAAMQKMTTKTVAIIGHTDN---SGNRASNIALSQARADAVKG 277 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 L+ GV ++S +G + ++D + NRRI+ Sbjct: 278 YLVAKGVPPQQMST-TGVGPDQPIASNDTADGRARNRRIEF 317 >gi|226939690|ref|YP_002794763.1| OmpA/MotB [Laribacter hongkongensis HLHK9] gi|226714616|gb|ACO73754.1| OmpA/MotB [Laribacter hongkongensis HLHK9] Length = 225 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 70/155 (45%), Gaps = 12/155 (7%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + ++ S L ++ + L + +++++ + F+ +S++ P Sbjct: 78 MDRQKAELESKLRSEISSG--QMQLQQNADQSLVVTMNEDAT---FNLNSAVVKPAFYPT 132 Query: 252 LQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + K+ E L + + RG+TD++ A N +LSL RA + L+ GV+ +RI Sbjct: 133 MNKVAETLKQYNQTTLVIRGYTDST---GAAAYNQQLSLKRANAVKSYLVGQGVAANRIQ 189 Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 I G + ++D + NRR+ I + +QG Sbjct: 190 TI-GMGESDPRASNDTAQGRAMNRRVSITIVPQQG 223 >gi|108757918|ref|YP_632429.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622] gi|108461798|gb|ABF86983.1| OmpA domain protein [Myxococcus xanthus DK 1622] Length = 620 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 75/246 (30%), Gaps = 14/246 (5%) Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 D+ E T NS + G + +Q + D + D Sbjct: 371 TDVCPTEPETFNSFQDEDGCPDDPNAHQPPTEAGQPAPAPAPLALPPAPVDTDKDGVVDS 430 Query: 158 CKSTDLEKS-INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 E ++ E+ P + + L + + + Sbjct: 431 EDLCQTEPEDLDGFEDEDGCPDPDNDQDGIPDAEDQCPLEAETINGVQDDDGCPDKGKAQ 490 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDA 274 I+I + F + L + +L+++ L + ++ + GHTD Sbjct: 491 VRVEGARIVI-----LDKVYFGTGQDVILARSHGLLRQVAATLKANPRILMVRVEGHTDD 545 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 N LS RA + L+K G++ R+ + G+ + ++ NR Sbjct: 546 Q---GNDMKNLDLSQRRARNVVAFLVKEGIAAQRLDAV-GYGEAKPVDTNETAKGRENNR 601 Query: 333 RIDILV 338 R++ + Sbjct: 602 RVEFNI 607 >gi|118578992|ref|YP_900242.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM 2379] gi|118501702|gb|ABK98184.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379] Length = 224 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 9/141 (6%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + +++ + +FD L K L S Sbjct: 81 QAAALKKNMPEAEVVRDGENVYVAL---PSGILFDTGKDELKTSAKESLAKAAATLKSSE 137 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I I+GHTD++ + N LS RA L +GV R++ I G+ R + Sbjct: 138 TNIIIQGHTDST---GSDKINQPLSQRRANQVRDFLAANGVPSSRMTAI-GYGSSRPAVP 193 Query: 324 SDPM--NSANRRIDILVEDRQ 342 +D + NRR+ + + + Sbjct: 194 NDTEVNRALNRRVQLEISPNE 214 >gi|255037862|ref|YP_003088483.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254950618|gb|ACT95318.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 525 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 87/272 (31%), Gaps = 26/272 (9%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 K+ + P + + ++ + + V + G K + +E I Sbjct: 277 FKDTEGKGDIVRYNLQPKPAPADSAVEAPVAVVPPSDPVVMISGKVIDSKTNKPVEATII 336 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 Y + E + + + K + N+ + + + ++K Sbjct: 337 YEDLTTGEEVGTATTNPTTGEYKLVLPYGQKYSMRAVAPNFIAEGENIDLTDSTGKEKSF 396 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 +++A K + + N F + E+ L Sbjct: 397 KEIANKSLKLIPIEEGQIVR-------------------LNNIFFATGKATLREESFPEL 437 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 +I + + I + GHTD + A N LS +RA + + L+ G+ DRI+ Sbjct: 438 NRIAISMTENKTLAIELGGHTDNT---GSAEFNVNLSQERADTVREYLIGKGIEPDRIAS 494 Query: 312 ISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 G+ + +D NRR++ + + Sbjct: 495 -KGYGETKPVATNDTPEGQQQNRRVEFKILKK 525 >gi|182678181|ref|YP_001832327.1| OmpA/MotB domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182634064|gb|ACB94838.1| OmpA/MotB domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 459 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 98/277 (35%), Gaps = 12/277 (4%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQ---NKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 ++ K + KG+ + Q + L +T + + + + Sbjct: 189 YDAALKAIHAPPKGLTLVKADIVAPLQYTFSATRLDGKLTLTGDVPSEDVHKQILAEAKR 248 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 N + +N + L + D ++ + E+ +A Sbjct: 249 LFFNEEIVDRLTVLGNAPQNFGSVILAGINALSRLADGVFTVTNTDVKLSGGALYERAVA 308 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 R L + S + K V ++ + + + + T +F+ + + Sbjct: 309 AIRTNLADQLPAGYQTDTSAITVHPEDKAVDSKSCQAELDGLLG--KATILFETNGATIS 366 Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + +L +I + H E I I GHTD++ N LS RA + + L+ +G+ Sbjct: 367 KSSEGLLDRIVTTIGHCPEATIEISGHTDST---GNEPFNLALSERRAKAVFDYLVAAGI 423 Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 D++S +G+ R ++D + NRRI+ V+ Sbjct: 424 PADKLSA-TGYGSSRPVASNDTEEGRAKNRRIEFTVK 459 >gi|213855850|ref|ZP_03384090.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 172 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 65/166 (39%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 +++K++ GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 6 HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 +T I + ++P + + N +LK + R + + Sbjct: 66 PLATAVTGGNRIANSKSPIPGGGDDYTQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQ 125 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 S+ + + ++G + + + K + + P Sbjct: 126 LIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEP 171 Score = 40.3 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 35/105 (33%), Gaps = 1/105 (0%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 ++T + +++ + +++ + RL L + + Sbjct: 68 ATAVTGGNRIANSKSPIPGGGDDYTQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQLI 127 Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + + + + G+ I IID +N PMF S+ P Sbjct: 128 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPY 172 >gi|260428759|ref|ZP_05782736.1| inner membrane lipoprotein YiaD [Citreicella sp. SE45] gi|260419382|gb|EEX12635.1| inner membrane lipoprotein YiaD [Citreicella sp. SE45] Length = 221 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 10/139 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + V T +++++ +F S+ + ++ +G L Sbjct: 87 EAELRQQLGNNVSINNTGDRLVVTMPQD---ILFPFDSAALRSDLQADIRTVGRSLLQYP 143 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + GHTD+ A N +LSL RA + VL+ GV RI I G + Sbjct: 144 NTTVQVLGHTDSD---GDAAYNQKLSLRRAQAVSSVLIAEGVPSSRIQSI-GRGEDQPIA 199 Query: 323 ASDPMNSA--NRRIDILVE 339 ++ NRR++I++ Sbjct: 200 SNLTAEGKQQNRRVEIVIL 218 >gi|170723276|ref|YP_001750964.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619] gi|169761279|gb|ACA74595.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 262 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 72/220 (32%), Gaps = 11/220 (5%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + ++ + + D + + + + + + A Sbjct: 39 QSDPQASKIAALETKDAQDWLNKADKAYMEREDSKKVDQLAYLTNQRVEVAKQTIALRSA 98 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K + + + + T G L++ D +FD + + Sbjct: 99 ENELKNASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD----VLFDFNKAELK 154 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + + K+ + L + E + G+TD+ A N LS RA + L+++GV Sbjct: 155 SSALPNVTKLAQFLQENPERKVIVEGYTDSV---GSANYNQSLSERRAGAVRMALVRAGV 211 Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 RI G+ + + + NRR+++ + + Sbjct: 212 DPARIVA-QGYGKEYPVADNSSNSGRAQNRRVEVTISNDN 250 >gi|77457447|ref|YP_346952.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1] gi|77381450|gb|ABA72963.1| putative outer membrane protein A precursor [Pseudomonas fluorescens Pf0-1] Length = 231 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F + P +VL K+ L + +++ GHTD+ N +LS RA+S Sbjct: 127 FQFDKATLTPADKLVLDKVASRLKQESSTAQLTVTGHTDSV---GSDAYNQKLSDRRAHS 183 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L++SGV + ++G + + + NRR +I + Sbjct: 184 VVKYLVESGVPQSSFVSVTGAGESQPVADNKTADGRALNRRTEIKINR 231 >gi|326561460|gb|EGE11810.1| outer membrane protein CD [Moraxella catarrhalis 46P47B1] gi|326562231|gb|EGE12559.1| outer membrane protein CD [Moraxella catarrhalis 7169] gi|326567185|gb|EGE17307.1| outer membrane protein CD [Moraxella catarrhalis BC1] gi|326568467|gb|EGE18547.1| outer membrane protein CD [Moraxella catarrhalis BC7] gi|326572021|gb|EGE22023.1| outer membrane protein CD [Moraxella catarrhalis BC8] gi|326574959|gb|EGE24889.1| outer membrane protein CD [Moraxella catarrhalis 101P30B1] Length = 453 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 84/287 (29%), Gaps = 7/287 (2%) Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 AI+ Y A K + S +L + N G Sbjct: 156 KVNAIDGYTAEVANGQNIAEKQVVKAGQEVAESKDTIGNLGLGARYLVNDALALRGEARA 215 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + L+ + + + + + + P Sbjct: 216 IHNFDNKWWEGLALAGLEVTLGGRLAPAVPVAPVAEPVAEP-VVAPAPVILPKPEPEPVI 274 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDK 239 E+ A+ + + L + V + L+ + Q FD Sbjct: 275 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNTVVDPRGCPVQVNLVEELRQELRVFFDY 334 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 SI P+ + K+ + +I GH R+ AR N RLS RA + + Sbjct: 335 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 394 Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L G++ +R++ + G+ R + NRR++ ++ + Sbjct: 395 LSNEFGIAPNRLNAV-GYGFDRPIAPNTTAEGKAMNRRVEAVITGSK 440 >gi|237742042|ref|ZP_04572523.1| outer membrane porin F [Fusobacterium sp. 4_1_13] gi|229429690|gb|EEO39902.1| outer membrane porin F [Fusobacterium sp. 4_1_13] Length = 348 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 10/266 (3%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + DE +R + VD + ++ + + Sbjct: 85 KGAGQYTDENVTIQRDEDGSGQYTNKVTGVTLQVDAQGEGQYLDEKNKISFQIGADGTGI 144 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + E ++T + + +E + + Y + K K ++ K Sbjct: 145 YKDEKNDMTVTINEKNATYTSGDITIENNGDGSGTYNDKAKNLLIENDGKGKAKITFNGK 204 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETIVVLQKI 255 L + I + +I + +FD PE VL+ + Sbjct: 205 TTEVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDLRPEAEEVLKNL 264 Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 VL + + + GHTD+ + N LS +RA + L G++ + I G Sbjct: 265 AIVLKEADIKAFEVDGHTDSD---ASDKHNQILSENRANAVKNFLTSQGITAE--ITIKG 319 Query: 315 FAHHRLKIASDPMNS--ANRRIDILV 338 + R ++D NRR++I++ Sbjct: 320 YGESRPIASNDTPEGKQKNRRVEIVI 345 >gi|118419991|gb|ABK88265.1| outer membrane protein CD [Moraxella catarrhalis] Length = 427 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 84/287 (29%), Gaps = 7/287 (2%) Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 AI+ Y A K + S +L + N G Sbjct: 130 KVNAIDGYTAEVANGQNIAEKQVVKAGQEVAESKDTIGNLGLGARYLVNDALALRGEARA 189 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + L+ + + + + + + P Sbjct: 190 IHNFDNKWWEGLALAGLEVTLGGRLAPAVPVAPVAEPVAEP-VVAPAPVILPKPEPEPVI 248 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDK 239 E+ A+ + + L + V + L+ + Q FD Sbjct: 249 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNTVVDPRGCPVQVNLVEELRQELRVFFDY 308 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 SI P+ + K+ + +I GH R+ AR N RLS RA + + Sbjct: 309 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 368 Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L G++ +R++ + G+ R + NRR++ ++ + Sbjct: 369 LSNEFGIAPNRLNAV-GYGFDRPIAPNTTAEGKAMNRRVEAVITGSK 414 >gi|311067881|ref|YP_003972804.1| flagellar motor protein MotB [Bacillus atrophaeus 1942] gi|310868398|gb|ADP31873.1| flagellar motor protein MotB [Bacillus atrophaeus 1942] Length = 262 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 84/200 (42%), Gaps = 10/200 (5%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + ++ + E+ +E ++ L+++ K++ + Sbjct: 60 GGTGVMDYSSVTPPESEQQGIDQLEDEKKKKKEKQEAADKTADQEELENVEKQVKQFIKD 119 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTE 264 +N + + T G+LI+I D FD + + I + ++I ++L + Sbjct: 120 KKLEN---QLETKLTDEGLLITIKDS---IFFDSGKATIREQDIPLAEEISDLLVLNPPR 173 Query: 265 VISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I I GHTD P +N NW LS+ RA + +L+++ + ++ GF ++ Sbjct: 174 NIIISGHTDNMPIKNSQFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGFGEYKPVAT 233 Query: 324 SDPMNSA--NRRIDILVEDR 341 +D NRR+++L+ R Sbjct: 234 NDTAEGRSKNRRVEVLILPR 253 >gi|307545103|ref|YP_003897582.1| OmpA/MotB [Halomonas elongata DSM 2581] gi|307217127|emb|CBV42397.1| OmpA/MotB [Halomonas elongata DSM 2581] Length = 270 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ VL + L + + I GHTD+ A+ N LS RA S Sbjct: 168 FEFDSAQLTMGAESVLTDVASKLRANENVRVRIEGHTDSV---GPAQYNKDLSQRRADSV 224 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 L G++ +R++ I G+ + ++D + NRR+++ Sbjct: 225 ASFLASQGIAANRMTTI-GYGEEQPVASNDTKAGRAENRRVEL 266 >gi|238790287|ref|ZP_04634061.1| Lateral flagellar proton motor protein B [Yersinia frederiksenii ATCC 33641] gi|238721637|gb|EEQ13303.1| Lateral flagellar proton motor protein B [Yersinia frederiksenii ATCC 33641] Length = 241 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 4/200 (2%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 NS + + + +++ + P + + K ++ +++L++ I Sbjct: 19 PSNSKSGGGKFSDSIDGQEQAKETKSNLAVEVPEPEQSLEDVVDKSRQEMEELSRIIMQI 78 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 S + + E G+ I I D + MF +SS++ P +L ++ Sbjct: 79 TSAY---DAQSNLHMEVVPQGLRILIQDDKQRDMFQRSSAVLTPFFSRLLGELAPAFNEM 135 Query: 263 TEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I I GHTDAS +R+ +NW LS +RA A++ L+K G+++ R+ +I+ H L Sbjct: 136 DNKIIITGHTDASRYRDQELYNNWNLSGERALMAHKALVKGGLADGRVLQINAMGHQMLL 195 Query: 322 IASDPMNSANRRIDILVEDR 341 ++P+ + NRRI+I++ + Sbjct: 196 HETEPLAAKNRRIEIMILTK 215 >gi|91224878|ref|ZP_01260138.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01] gi|91190424|gb|EAS76693.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01] Length = 330 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 ++ T F+ S+ L L + + I G+TD+ A N +LS Sbjct: 211 EEYGTGTFEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 267 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S L +G+ DR+ + G + NRR++++V Sbjct: 268 ERRAQSVADYLTAAGIGSDRL-TVKGMGEENPVADNSTREGREKNRRVEVVV 318 >gi|160880837|ref|YP_001559805.1| OmpA/MotB domain-containing protein [Clostridium phytofermentans ISDg] gi|160429503|gb|ABX43066.1| OmpA/MotB domain protein [Clostridium phytofermentans ISDg] Length = 275 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 81/227 (35%), Gaps = 15/227 (6%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 ++ + LS+S +S D + + + + EK Sbjct: 46 DQEKFDQVAASLSSSFSIFSGGHSSIGDGQLINMGVSQLNDFNQYFTNMGQTIDSVDGEK 105 Query: 183 ILAMKR------KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 I +K+ K + + + I+ D + +T +LI+I + + Sbjct: 106 IDELKQLLTEANKAETEKMYENITEMSGQYNLDKYLDIETDKTGGQYVLINI---SGSLL 162 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNIARDNWRLSLDRAYS 294 +D + E + + K+G++L + GHTD P I R N LS RA + Sbjct: 163 YDSGKAQLKSEALPIFSKVGDILKTYKGYRISVIGHTDNVPVTSGIYRSNKELSSARAIN 222 Query: 295 AYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + L+ G+ I I G + + NRRI+I + Sbjct: 223 AAEYLIDVKGIDPSNIEWI-GRGEYDPIADNSSEAGRSKNRRIEIRI 268 Score = 43.4 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 26/69 (37%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K ++ W +AD M +L+ FF++++ + D + + + Sbjct: 7 RKKKTEEASAGAPLWMNTFADLMNLLLCFFVLLFAFSNVDQEKFDQVAASLSSSFSIFSG 66 Query: 79 ASKGIFDEQ 87 I D Q Sbjct: 67 GHSSIGDGQ 75 >gi|86141364|ref|ZP_01059910.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis MED217] gi|85831923|gb|EAQ50378.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis MED217] Length = 276 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 72/174 (41%), Gaps = 9/174 (5%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + + R + + ++L G + + + + + + +SI D+ Sbjct: 92 EQMKEKDLQIKAFRDAMNRKDSVTLALVTSLKGAIGNLNDEDIEINVEKGVVYVSISDKL 151 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLD 290 +F+ VL K+ V+ + ++ + GHTD+ P DNW LS+ Sbjct: 152 ---LFNSGRWDVTNRAKEVLGKVATVVKNKPDIEFMVEGHTDSQPISTSVIEDNWDLSVK 208 Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 RA S ++L + GV +R+ G +++ ++D + NRR I+V + Sbjct: 209 RATSVVRILQEEFGVPPERMVAA-GRSYYVPLASNDTAEGRARNRRTRIVVLPK 261 >gi|115376920|ref|ZP_01464141.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] gi|310825376|ref|YP_003957734.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] gi|115366099|gb|EAU65113.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] gi|309398448|gb|ADO75907.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] Length = 374 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 98/282 (34%), Gaps = 11/282 (3%) Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 K + + + + E +Q + + + + ++ + Sbjct: 87 RKAQLAEAQASIAVAQHQRAVAAQALRQTQE--AQRRQSQAQLDAAQRQLLEARRLRDEA 144 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + + + Q+++ + + R +++ + ++ + + + E Sbjct: 145 AQLAEARRLQSQTVQLQQEAQRRQEEMDRLAQEQRQRSEAETQAQRLAQAEQALEVERRA 204 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + A+ + + L + G ++++ + +F Sbjct: 205 RAEAETRAAEEREARARAEAQAATALAGLARQGELKVSEDARGTVLTL---SGSVLFASG 261 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 LP L ++ E L + ++I GHTDA R N LS RA L+ Sbjct: 262 EDDLLPSARSKLSEVAEALKPTHNRLTIEGHTDAQ---GADRFNEDLSFRRAERVRNFLV 318 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 GV+ +R+ ++ G +R ++ NRR++I+++ Sbjct: 319 SQGVAANRV-EVRGLGEYRPVASNSTAEGRANNRRVEIILQR 359 >gi|104780902|ref|YP_607400.1| outer membrane protein OprF [Pseudomonas entomophila L48] gi|95109889|emb|CAK14594.1| outer membrane protein OprF [Pseudomonas entomophila L48] Length = 346 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + + GHT Sbjct: 217 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYADIKNLADFMKQYPQTTTTVEGHT 276 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + VL + GV R+S + G+ R + Sbjct: 277 DSV---GPDAYNQKLSERRAKAVKDVLTQQYGVESGRVSSV-GYGETRPVADNATEAGRA 332 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 333 VNRRVEAQVEA 343 >gi|260772262|ref|ZP_05881178.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14] gi|260611401|gb|EEX36604.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14] Length = 327 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + ++ F S E+ L K+ L + + I GHTDA+ A N LS Sbjct: 212 RLDSSSFAFDSVSLNQESKQQLTKLVRFLNQYPQAKVVITGHTDAT---GPAAYNQTLSE 268 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + L++ G+ RI G ++ NRR+DI + Sbjct: 269 KRAKAVADALVEQGIQRSRI-TWRGEGETNPIASNSTAEGRELNRRVDITI 318 >gi|42521782|ref|NP_967162.1| chemotaxis motB protein [Bdellovibrio bacteriovorus HD100] gi|39574312|emb|CAE77816.1| chemotaxis motB protein [Bdellovibrio bacteriovorus HD100] Length = 249 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 6/152 (3%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 ++ + +L + K + + + + I + F + S+ PE + L Sbjct: 94 EVEDYVERSLDKSMDSAQKKLAIQDVYHDAVGVRIA-LAASTFFQEGSAKLKPEALKSLD 152 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISK 311 K+ +VL + I I GHTD P NW L+ RA + + L+K + R Sbjct: 153 KVADVLKTHKKRIIIEGHTDDLPIAGTLFPSNWELAGGRASAVVRYLVKVHQMDPKRFVS 212 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 +S + + + +D + NRRI+I + Sbjct: 213 LS-YGDQKPVVPNDSDEHRAMNRRIEIFIVTD 243 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 1/97 (1%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + KK ++ N+ W + YADF+T+L AFF+VM+ + ++++ +K E Sbjct: 1 MAKKHRKHEEHENH-ERWLVSYADFITLLFAFFVVMYATSTSNEEKQKEFEDSVKLSLHL 59 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 + + + V+ Sbjct: 60 VGRGGSDADSNSIGSIIGELEMPVGNFPKKGGPGEVE 96 >gi|254787924|ref|YP_003075353.1| OmpA/MotB domain-containing protein [Teredinibacter turnerae T7901] gi|237683974|gb|ACR11238.1| OmpA/MotB domain protein [Teredinibacter turnerae T7901] Length = 304 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 95/259 (36%), Gaps = 13/259 (5%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 + + + + K+ L+ + Y+ + Sbjct: 42 SVVSSQNLEEYAPVAFDEAGKSIARLETLENDGADDYELEHQQYLAERKLDTAIELAKHN 101 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 + DL + + + + ++ ++A ++++ Sbjct: 102 RSQEYIDDADVRRKDLMLQARERDLTQAEREAAFMKSRAEAAEQRAEMAVARANSMEEKA 161 Query: 208 ADNIV--KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + + V + + G++I++ D +F S P + L+K+ ++LA + Sbjct: 162 SQMASKLESVTTKLDKRGLVITMGD----ILFATDESEVKPGAVRTLEKVSDLLAEYPDR 217 Query: 266 -ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I + G TD++ A N LS RA + + L+ +G++EDR+S G+ ++ Sbjct: 218 EILVEGFTDST---GAADYNKNLSERRAEAVVKQLVDNGLAEDRLSA-KGYGEEYPVASN 273 Query: 325 DPMNSA--NRRIDILVEDR 341 D NRR++++V ++ Sbjct: 274 DTAAGRQQNRRVELVVANK 292 >gi|254251112|ref|ZP_04944430.1| hypothetical protein BDAG_00285 [Burkholderia dolosa AUO158] gi|124893721|gb|EAY67601.1| hypothetical protein BDAG_00285 [Burkholderia dolosa AUO158] Length = 431 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 8/168 (4%) Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + E + ++RL +++ LS L+ D I +GVL I + + Sbjct: 268 TERHALEARILEIGRERLASAPQRLR--LSQLLRDEIARGVLTVDEDERRSIVVF--KGD 323 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAY 293 MF S LP +L K+ +A + + GHTD P R+ A +N LS RA Sbjct: 324 SMFASGQSTVLPGIEPILDKVAREVARVGGTVLVTGHTDNQPIRSAAFANNLALSEKRAA 383 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 Q+L + G +RI + G + + NRR++I+V Sbjct: 384 YVAQILQRDGTPAERIRAV-GKGDTQPVGDNATAAGRALNRRVEIMVT 430 >gi|269836612|ref|YP_003318840.1| OmpA/MotB domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269785875|gb|ACZ38018.1| OmpA/MotB domain protein [Sphaerobacter thermophilus DSM 20745] Length = 233 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 43/174 (24%), Positives = 70/174 (40%), Gaps = 8/174 (4%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + P LA + + + LA + D + E T+ GI+I + + Sbjct: 60 DVMEPGQPLGPALAEQDFRFMSFLAIRAQIASLVQRYDLGLDAADVELTQEGIVIHLAES 119 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290 +F PE VL I ++ + + GHTD P N DNW LS Sbjct: 120 ---VLFPPGEVQLRPEAHRVLADIAAIIGPMPFPVRVEGHTDNVPPANPNYPDNWALSTM 176 Query: 291 RAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 RA S + L GV +R+ + G+A HR + + + NRR+D+++ Sbjct: 177 RAVSTVRFLSDVQGVPAERLVAV-GYAEHRPRADNRTLEGRRKNRRVDLVIVQP 229 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 25/68 (36%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + W + YAD +T+L+ FF+VM+ I+ D + + + Sbjct: 3 RRRHEHAGEASSERWLVTYADLITLLLVFFVVMYSISKADSAKFQRFSTSVQQAFRVDVM 62 Query: 79 ASKGIFDE 86 Sbjct: 63 EPGQPLGP 70 >gi|303240000|ref|ZP_07326522.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2] gi|302592479|gb|EFL62205.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2] Length = 261 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 11/195 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + + + ++ E N S ++K + + +++ + +SGL D Sbjct: 74 NGKDIVSIFEENMVDDIDTNETNNESKSGSNADYDTENKQKAITEFKEEVQALISGLKID 133 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 + V +T +++ I + +FD + L+K+GE++ I++ Sbjct: 134 ---EYVHVVDVKTSVILRI---DSAILFDVGKADIKESGKDTLKKVGELMDKLNTNIAVM 187 Query: 270 GHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM 327 GHTD P NW LS RA + L+ ++ +++ +G R +D Sbjct: 188 GHTDNIPINTSLFPSNWELSTRRATNVVVFLVNECNLNPTKLTA-TGNGEFRPIAPNDSE 246 Query: 328 --NSANRRIDILVED 340 NRR+DI+++ Sbjct: 247 ENRQKNRRVDIVIDK 261 >gi|86134567|ref|ZP_01053149.1| OmpA family protein [Polaribacter sp. MED152] gi|85821430|gb|EAQ42577.1| OmpA family protein [Polaribacter sp. MED152] Length = 283 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 10/246 (4%) Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161 +EH LK+ ++ QK ++ + + + S+Q ++ + ++ ++L T Sbjct: 29 QEEHAQAKDELLKVETSLQKCLIEKEKQDTKVFALSEQVKYLQEDKKTALKQVENLTVLT 88 Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK-GVLFETT 220 K L K K + L I L+ +AD I + Sbjct: 89 QSSSDNIKNVISQLSEKDKYINGVRKAMTQKDSLNLAIKYHLTRNLADGIQDKDIEVNVE 148 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRN 279 +T + ISI D+ +F S VL KI +V+ ++ + I GHTD +P + Sbjct: 149 KTVVFISISDKL---LFKSGSYNVTENAYTVLDKIAKVIKDQPKMEVMIEGHTDTTPIKR 205 Query: 280 IA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 +DNW LS RA S ++L K GV +R+ G + + +D + NRR Sbjct: 206 DLIQDNWDLSALRATSITRILQYKFGVKPERLIAA-GRSQYIPLAPNDTAENKAKNRRTK 264 Query: 336 ILVEDR 341 I++ + Sbjct: 265 IIIMPK 270 >gi|315224547|ref|ZP_07866374.1| OmpA family protein [Capnocytophaga ochracea F0287] gi|314945568|gb|EFS97590.1| OmpA family protein [Capnocytophaga ochracea F0287] Length = 230 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 52/142 (36%), Gaps = 7/142 (4%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + G + GI+++ + FD + ++ L K+ +L Sbjct: 80 QAKKIEEEIPGADVKRVDDGIVVTFDENNGGVYFDTNKYNINNKSRQTLDKLSAILKEYP 139 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + + GHTD N LS RA + G++ R + + Sbjct: 140 DTNVIVAGHTDNV---GKDEYNLGLSQRRAQAVTNYFKSKGLAGSRFTT-KWYGERNPVA 195 Query: 323 ASDPM--NSANRRIDILVEDRQ 342 +++ + NRR+++++ + Sbjct: 196 SNETADGRAKNRRVNVVIVPNE 217 >gi|163735541|ref|ZP_02142973.1| chemotaxis protein MotB, putative [Roseobacter litoralis Och 149] gi|161391161|gb|EDQ15498.1| chemotaxis protein MotB, putative [Roseobacter litoralis Och 149] Length = 279 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 66/332 (19%), Positives = 119/332 (35%), Gaps = 57/332 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 Q N +IIKKK + ++ G+WK+ YADF+T +MAFF++MW++NAT + + + Y Sbjct: 4 QSNLAPVIIKKKKKVVGGGHHGGAWKVAYADFVTAMMAFFMMMWLLNATTEQQRAGLADY 63 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F P P R S + I + G Sbjct: 64 FAPTI---------------PINRISGGGDGAFGGDSIFSEETLPQNG------------ 96 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 T K S E++ L M R Sbjct: 97 ----------------LGATSQHATRKKAASGESGNDSDGGEQDSSDEELQALIEELMGR 140 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + ++ + + ++I + P+F +S P P Sbjct: 141 GGESTVMENALEHIVTRITDEG-------------LVIELFALDGQPLFQPNSDDPTPLM 187 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +++ + V +T I+I H + P W +S DRA +L ++G+ +R Sbjct: 188 TQLVELVASVAFAATNNIAIGAHVPSRPIVVAQNPVWDVSTDRATRTRLMLQENGLEPER 247 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + +++G A + PM + N R++I++ Sbjct: 248 MHRVTGHADREPVHLN-PMATRNSRVEIVLLR 278 >gi|84685261|ref|ZP_01013160.1| OmpA family protein [Maritimibacter alkaliphilus HTCC2654] gi|84666993|gb|EAQ13464.1| OmpA family protein [Rhodobacterales bacterium HTCC2654] Length = 225 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 10/148 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 ++ L + + T + + + + +F S+ P L+ + Sbjct: 84 NQLDKQAGDLRSSLSNSSIQVINTGSYLKVVM---PQGILFPTDSADVSPALYPDLRALA 140 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 E L + GHTD + A N LS RA + V+ +GV R+ + G Sbjct: 141 ENLREYPNSSVQVVGHTDNT---GQASYNLTLSQRRAQAVLGVIQSNGVGAARLQAV-GK 196 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDR 341 + + NRR+++L+ R Sbjct: 197 GDSEPVATNLTPEGRAQNRRVEVLIIPR 224 >gi|237741116|ref|ZP_04571597.1| outer membrane protein [Fusobacterium sp. 4_1_13] gi|229430648|gb|EEO40860.1| outer membrane protein [Fusobacterium sp. 4_1_13] Length = 144 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 5/132 (3%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 K V + ++I+ + FD S P+ +L+ I E + + I+I+GHT Sbjct: 4 KNVDILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQNNYEITIQGHT 63 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330 D+ N++LS RA S L++ G++EDRI I + ++ + Sbjct: 64 DSI---GSNAYNFKLSRRRAESVKAKLLEFGLAEDRIVGIEAMGEEQPIATNETKEGRAQ 120 Query: 331 NRRIDILVEDRQ 342 NRR++ + R+ Sbjct: 121 NRRVEFKLVQRE 132 >gi|327403673|ref|YP_004344511.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327319181|gb|AEA43673.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 223 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S P + L + E++ E+ I GHTD+ + N +LS RA S Sbjct: 122 FETGKSDLKPISYGALNNLVEIMKRKKEIKIQIDGHTDSD---GDNQANQQLSQKRAESV 178 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 L+ G+ R+ G + ++ + NRR +I + Sbjct: 179 RNYLISKGIDATRVKA-KGNGESKPIADNNTAQGKAQNRRTEITIL 223 >gi|300727657|ref|ZP_07061045.1| OmpA family protein [Prevotella bryantii B14] gi|299775083|gb|EFI71687.1| OmpA family protein [Prevotella bryantii B14] Length = 286 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 65/165 (39%), Gaps = 14/165 (8%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + K + L +++ L+ ++ + +K V + + + IS+ D ++ S Sbjct: 109 EVKSKSDSLNMVLTNNLTRSLSKDEMKEVDVQVLKGVVYISLADNM---LYKSGSYEVND 165 Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARD------NWRLSLDRAYSAYQVL 299 L KI +++ + I G+TD P A NW LS RA S Q L Sbjct: 166 RAEQTLSKIAKIIKDYKDYDVLIEGNTDNVPVNTKAVSMKNIRNNWDLSALRASSVVQYL 225 Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 G++ R++ G + +D NRR I++ + Sbjct: 226 QDHYGINPKRLTAG-GRGEYNPIATNDTELGKQRNRRTQIIITPK 269 >gi|189475074|gb|ACE00211.1| OmpA [Vibrio alginolyticus] Length = 330 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 ++ T F+ S+ L L + + I G+TD+ A N +LS Sbjct: 211 EEYGTGTFEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDS---SGPAAYNQKLS 267 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S L +G+ DR+ + G + NRR++++V Sbjct: 268 ERRAQSVADYLTAAGIGSDRL-TVKGMGEENPVADNSTREGREKNRRVEVVV 318 >gi|285017363|ref|YP_003375074.1| ompa family outer membrane protein precursor [Xanthomonas albilineans GPE PC73] gi|283472581|emb|CBA15086.1| putative ompa family outer membrane protein precursor [Xanthomonas albilineans] Length = 366 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 68/231 (29%), Gaps = 16/231 (6%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + +I + + + + I P Sbjct: 143 GAGLQTTFDKHIAVRAEVAYRADFDDKSVAAPSRNWFGDALASVGVVIPLGPAPSAPVPP 202 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 D +++ + V + + I + FD Sbjct: 203 PPPPPVAPSCADKDDDGDGVNNCDDKCPDSKPGQTVGPDGCPVPVSIDLKGVN----FDF 258 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + S P+ I +L + +L + + + GHTD+ + N +LS RA Y Sbjct: 259 NKSTLRPDAIGLLNEAVGILNSYPDLKVQVAGHTDSI---GSDKYNQKLSERRARVVYDY 315 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVEDR 341 L+K GV R+ G+ R + + NRR ++ VE++ Sbjct: 316 LVKHGVDASRLDGPIGYGKTRPIAPNTNPDGSDNPEGRAKNRRTELNVENK 366 >gi|114321978|ref|YP_743661.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114228372|gb|ABI58171.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 362 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 90/257 (35%), Gaps = 21/257 (8%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 + +++ + + + + E+ + + Sbjct: 107 EAQQAALEDSLADQEEALDEAAARRAELRDRLAGREADLARERALTDEQAARIDRLHRQI 166 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 ++ ++ L + A ++ ++DL ++++ L+ V + F + Sbjct: 167 IALREQLTALSEALDLSEATAAAQRAEIRDLGQRLNLALAERVQELARYRSEFFGRLREV 226 Query: 225 L-----ISIIDQR----NTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVIS 267 L I I R + +F +S+ E L+ + L V+ Sbjct: 227 LGDHPDIRIEGDRFLFQSELLFATASADLGGEGREQLEGLATTLHELRGRIPDDLDWVLQ 286 Query: 268 IRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + GHTD P R NW LS RA + + LM G+ +R+ +GFA + D Sbjct: 287 VEGHTDRRPIRTAEFPSNWELSTARAQTIVRYLMDQGIPPERL-AAAGFAEYHPVDDRDT 345 Query: 327 --MNSANRRIDILVEDR 341 + NRRI++ + +R Sbjct: 346 PEAWARNRRIELRLTNR 362 >gi|228471996|ref|ZP_04056764.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624] gi|228276608|gb|EEK15321.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624] Length = 278 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 9/156 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 R + + +L G++ + + + + + + +SI D+ +F S P Sbjct: 109 RRDSINLALVQSLKGVLGNLDDEDITVQVDKGVVYVSISDKM---LFSSGSYNVTPRARE 165 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSED 307 VL K+ +V+ + + + GHTD P +N +DNW LS+ RA + ++L GV+ Sbjct: 166 VLGKVAKVVNNKPDFEFMVEGHTDNVPIKNTCIKDNWDLSVLRATAVVRILQNDFGVTAS 225 Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 R++ G + ++ + NRR I+V + Sbjct: 226 RMTAA-GRGEYVPVTSNASADGRALNRRTRIVVLPK 260 >gi|159025750|emb|CAO02049.1| outer membrane protein A [Bordetella holmesii] Length = 177 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S+ PE +L ++ + I GHTD+ N +LS RA S Sbjct: 70 FFDFDKSVLKPEGRQLLDQVAQQAKAIDLETIIAVGHTDSI---GTEAYNLKLSDRRAAS 126 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 L+ G+ +RI G + + + NRR++I + + Sbjct: 127 VKAYLVSKGIDPNRIYT-EGKGEAQPIATNKTAEGRARNRRVEIEIVGSR 175 >gi|221638712|ref|YP_002524974.1| hypothetical protein RSKD131_0613 [Rhodobacter sphaeroides KD131] gi|221159493|gb|ACM00473.1| OmpA/MotB domain protein [Rhodobacter sphaeroides KD131] Length = 525 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 83/241 (34%), Gaps = 16/241 (6%) Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + G + + L N +Q +++ + + L +N Sbjct: 288 REGEGAEAARRVALLNEQVAALRAQLGSLQGLLEAAEAQDAANKVQLQSLGTQLNSALAQ 347 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + L + RL+ K ++ S + VL ++ + Sbjct: 348 VASEQKRRAELEEAERLRLEAENKDLARFRSEFFGQL--RQVLAGREGVRVVGDRFVFSS 405 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRN--IARD 283 +F+ S+ PE + + + L +I + GHTD P RD Sbjct: 406 EVLFEPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFGAFRD 465 Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 NW LS RA S + + +S G R+ +GF +R D + NRRI++ + + Sbjct: 466 NWELSSARALSVVRFMQQSLGFPPSRL-AATGFGEYRPVTPGDSADARAQNRRIELKLTE 524 Query: 341 R 341 R Sbjct: 525 R 525 >gi|209550136|ref|YP_002282053.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535892|gb|ACI55827.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 221 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + S L A G+ I++++ FD P L + Sbjct: 78 NYMDQQESELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 134 Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + +I + GHTD++ + N LS RA S L G+ + R+S + GF Sbjct: 135 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 190 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 + ++ + NRR++I + Sbjct: 191 GPSQPVASNASEAGRAQNRRVEIQI 215 >gi|170741264|ref|YP_001769919.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46] gi|168195538|gb|ACA17485.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46] Length = 337 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 109/326 (33%), Gaps = 27/326 (8%) Query: 37 YADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96 Y D +T L+ + + I T G++ + + + + Sbjct: 18 YVDALTTLLLSVVFLLTIFVTG-----QFFLSQEISGRDTVLGRLNRQIAELTDLLALER 72 Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 +++E +L+ T +++ L + + + + + Sbjct: 73 SGRRTLEETAASLRANLQESETERRRLQDALSADQGAQGKASDLGRQLEAEKGATNRALS 132 Query: 157 LCKSTDLEKSINKEENYFLPPLSK-EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + + + + +++ L + + + R+ DL +++ L+ V + Sbjct: 133 QVELLNQQIAAMRQQLAALEDALAASETRDRESQARIADLGSRLNVALAQRVQELARYRS 192 Query: 216 LFETTRTGILISIIDQR---------NTPMFDKSSSIPLPETIVVLQKIGEVL------- 259 F IL + D R + +F + PE L +I + Sbjct: 193 DFFGRLRQILGNRSDIRIVGDRFVLQSEVLFAAGQATLRPEAGAELDRIAVAIIELGRQI 252 Query: 260 -AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTDA P + NW LS R+ + Q ++ G+ R+ + F Sbjct: 253 PPDIPWVLRVDGHTDARPISSATFPSNWALSAARSIAVVQYMVGRGIPPQRLLAGA-FGE 311 Query: 318 HRLKIASDPMN--SANRRIDILVEDR 341 + + NRRI++ + +R Sbjct: 312 FQPLDTGTTEEAYARNRRIELKLTER 337 >gi|325105320|ref|YP_004274974.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] gi|324974168|gb|ADY53152.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] Length = 278 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 10/176 (5%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + L + + ++ + + + + L + KG+ E + +S+ D+ Sbjct: 98 SEDLKRREQRLKEVEEMIRKRDEASNALKNKLQKALLGFQDKGLTVEMRDGKVYVSLTDK 157 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFR--NIARDNWRLS 288 +F S + L ++ +L E+ + GHTD +DNW LS Sbjct: 158 L---LFASGSIVIDERGKQALHELAVILNTQPEINIAVEGHTDNQRVVNLGQIKDNWDLS 214 Query: 289 LDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + RA S + L + +S +RI +G + + S NRRI+I++ + Sbjct: 215 VLRATSVVRFLTVDEKISPNRIMA-TGKGEFQPISTDNSAESRSKNRRIEIVLSPK 269 >gi|332877182|ref|ZP_08444932.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684925|gb|EGJ57772.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 284 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 9/213 (4%) Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 + +E K S + + + +K ++ K + Sbjct: 56 AEAQKANEELKASYAALQGSLDKSIQQNSQGNVNISKLVDEINASNKFIKQLVEAKDKSD 115 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 L +++ L+ ++ +K V + + + IS+ D ++ S L Sbjct: 116 SLNMVLTNNLTRSLSREEMKDVDIQVLKGVVYISLADNM---LYKSGSYEISERAGETLS 172 Query: 254 KIGEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMK-SGVSEDRIS 310 KI +++ E + I G+TD P R+NW LS RA S Q L GV R++ Sbjct: 173 KIAKIIMDYKEYEVLIEGNTDTDPISRPNIRNNWDLSTLRASSVVQALQNTYGVDPKRLT 232 Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 G + ++D NRR I++ + Sbjct: 233 AA-GRGEYNPVASNDTPEGKMRNRRTQIIITPK 264 >gi|254494341|ref|ZP_05107512.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|226513381|gb|EEH62726.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] Length = 216 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L + + + I + + + F S+ L + Sbjct: 67 YMDYQEQRLRQNLADTQIEIQRQGNQIRLVMPESVT---FATGSAALGGSAQYALNTAAQ 123 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +I GHTD + N LS RA + L GV+ R+ + G+ Sbjct: 124 TLVQYPDTTLTINGHTDNT---GSDAVNNPLSQHRAQAVAYYLQTRGVAASRL-TVYGYG 179 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 H ++ + NRR++IL+ Q Sbjct: 180 SHMPVASNATVEGRAQNRRVEILINPDQ 207 >gi|50956536|gb|AAT90783.1| conserved hypothetical protein [uncultured proteobacterium QS1] Length = 575 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 72/207 (34%), Gaps = 11/207 (5%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 ++ D + + + ++ + L ++ + ++ + L+ + Sbjct: 350 RQISDDLRRYTAIPVAERRDQPQFTLREDAVAVLRQDAMRLDAYYRQGEPLSLGLGLYRG 409 Query: 205 GLVADNIVKGVLFETTRTGILI-----SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L+ ++ + + I S + + +F S+ P + VL + Sbjct: 410 ELLRQPLLATIADHRQPPELPILAKIPSPVRLDSLSLFAPGSAELKPGSTKVLIAALVNI 469 Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + GHTD N LS RA S + + G D + GF + Sbjct: 470 KAQPGWLIVIAGHTD---VTGSPEQNLELSRARAASVRDWMQRMGDIPDSCFAVQGFGAN 526 Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343 + ++D +ANRR+DI + G Sbjct: 527 QPVASNDTEVGRAANRRVDIRLVPEVG 553 >gi|256827978|ref|YP_003156706.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256577154|gb|ACU88290.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028] Length = 223 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 16/152 (10%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + + + LS + V + +++ F S + LP Sbjct: 76 RMMDNQEADMRQALSQ------SEEVAVRREGDLLALTLKGDVT---FAVDSDVVLPGLY 126 Query: 250 VVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +++I +VL + + GHTD++ N LS RA+S ++L++ GV+ R Sbjct: 127 TEIERIAQVLVKYPQTTIVVEGHTDST---GSDTYNQALSERRAWSVQRLLVERGVNPSR 183 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 I+ + G+ R +D NRR++I V Sbjct: 184 ITAM-GYGESRPVATNDTPEGRQMNRRVEIRV 214 >gi|77919971|ref|YP_357786.1| outer membrane protein/peptidoglycan-associated (lipo)proteins [Pelobacter carbinolicus DSM 2380] gi|77546054|gb|ABA89616.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Pelobacter carbinolicus DSM 2380] Length = 427 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 82/282 (29%), Gaps = 15/282 (5%) Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YF L + +F +P + + + + T+Q Sbjct: 144 YFFTDSLALRGDLRHVFAFGDPENNFIYSAGLTYLFGSQQPATPRVVPKDTDQDGIIDAN 203 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + + + + + K S+ ++ + + + Sbjct: 204 DACPDTPAGAPVDKLGCPLDSDKDGVPDYRDKCPGTPDSVAVDQQGCALDKDGDGVADIH 263 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-------FDKS 240 + + + AD + ++DQ+ P+ FD Sbjct: 264 DRCPDTPADTPVDTEGCMGDADKDGVADQMDKCPGTPAGLMVDQQGCPISLTLAIEFDVD 323 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 + P L++ + + E I GHTD++ N LS RA S + Sbjct: 324 KADIKPRYHSELKRGADFIRKYPESRILIAGHTDST---ASDAYNLALSQRRADSVRNYV 380 Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + + G+ +R+ G+ + NRR+++ V Sbjct: 381 ISNFGIKAERLEA-KGYGEAFPIADNATVQGRQRNRRVELSV 421 >gi|6045178|dbj|BAA85317.1| MotB protein, partial [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 176 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 65/166 (39%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 +++K++ GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 6 HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 +T I + ++P + + N +LK + R + + Sbjct: 66 PLATAVTGGNRIANSESPIPGGGDDYTQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQ 125 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 S+ + + ++G + + + K + + P Sbjct: 126 LIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEP 171 Score = 40.7 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 1/107 (0%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 ++T + +++ + +++ + RL L + + Sbjct: 68 ATAVTGGNRIANSESPIPGGGDDYTQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQLI 127 Query: 204 S-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + + + G+ I IID +N PMF S+ P Sbjct: 128 ESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMR 174 >gi|332533226|ref|ZP_08409093.1| putative lipoprotein [Pseudoalteromonas haloplanktis ANT/505] gi|332037305|gb|EGI73760.1| putative lipoprotein [Pseudoalteromonas haloplanktis ANT/505] Length = 210 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + GV + + + F S L I Sbjct: 67 NYMDKQEEAFRDELAGSGVEVVREGDNLRLVMPSNIT---FATDQSYISSGFNDTLDAIA 123 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +V+ +SI GHTD++ N LS +RA S L+ + +R+S + G+ Sbjct: 124 KVMNKYEKTYLSIEGHTDST---GKDSYNMNLSRERAQSVKNYLVNQQIMAERVSTM-GY 179 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 R +D + NRR++I + Sbjct: 180 GETRPIATNDSANGRAQNRRVEIQI 204 >gi|326576289|gb|EGE26204.1| outer membrane protein CD [Moraxella catarrhalis CO72] Length = 453 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 84/287 (29%), Gaps = 7/287 (2%) Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 AI+ Y A K + S +L + N G Sbjct: 156 KVNAIDGYTAEVANGQNIAEKQVVKAGQEVAESKDTIGNLGLGARYLVNDALALRGEARA 215 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + L+ + + + + + + P Sbjct: 216 IHNFDNKWWEGLALAGLEVTLGGRLAPAVPVAPVAEPVAEP-VVAPAPVILPKPEPEPVI 274 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDK 239 E+ A+ + + L + V + L+ + Q FD Sbjct: 275 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNAVVDPRGCPVQVNLVEELRQELRVFFDY 334 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 SI P+ + K+ + +I GH R+ AR N RLS RA + + Sbjct: 335 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 394 Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L G++ +R++ + G+ R + NRR++ ++ + Sbjct: 395 LSNEFGIAPNRLNAV-GYGFDRPIAPNTTAEGKAMNRRVEAVITGSK 440 >gi|304398526|ref|ZP_07380399.1| OmpA/MotB domain protein [Pantoea sp. aB] gi|304354031|gb|EFM18405.1| OmpA/MotB domain protein [Pantoea sp. aB] Length = 570 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 85/301 (28%), Gaps = 22/301 (7%) Query: 50 VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 ++W + + + + + + + LS Sbjct: 252 MLWGMGPI-------LAGSLATSVWTAWLSHRTAMQQVAGWQPIGSDSTILSPFPDFVLP 304 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + G T++ + ++ + + N+ D+ + + + Sbjct: 305 LLPEGEGLTSRGRSWRCALGIFTLAATAALLSSGWNNRQLLQRVSFDIARYDRIPMQDSG 364 Query: 170 EENYFLPPLSKEKIL----AMKRKKRLQDLAKKISSTLSGLVADNIVKG-----VLFETT 220 + + L + A L L V D I Sbjct: 365 PKASAVATLRDDATELDGWARNGVPARMSLGLYQGERLRMPVLDAIRSYEPPSLPPEPQP 424 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRN 279 + I+ + +FD ++ + +L + I + GHTD + Sbjct: 425 IPQPVTKIVRLDSMSLFDSGKAVLKTGSTRMLVNSLVGIKAKPGWLIVVSGHTDNT---G 481 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 + N LSL RA + + +G + + G+ R +D + NRR++I Sbjct: 482 NPQLNQTLSLRRAAAVRDWMRDTGDVPESCFAVQGYGESRPVATNDTPAGRALNRRVEIS 541 Query: 338 V 338 + Sbjct: 542 L 542 >gi|34763981|ref|ZP_00144872.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886240|gb|EAA23525.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 315 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 38/276 (13%), Positives = 88/276 (31%), Gaps = 20/276 (7%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 + + G N + +++ + + + Y+ Sbjct: 54 AGQYTDEKVTIQRDEDGSGQYTNKVTGVTLQVDAQGEGQYLDEKNKISFQIGADGTGVYK 113 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 +N++ N + + + +T ++ + + + + + ++ Sbjct: 114 DEKNDMTVTINEKNATYTSGDITIENNGDGSGTYNDKAKNLLIENDGKGKAKITFNGKTT 173 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K L+ K + V +L + +FD Sbjct: 174 EVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITL------------DSGILFDVDKYDLR 221 Query: 246 PETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 PE VL+ + VL + + + GHTD+ + N LS +RA + L G+ Sbjct: 222 PEAEEVLKNLAIVLKEADIKAFEVDGHTDSD---ASDKHNRILSENRANAVKNFLTSQGI 278 Query: 305 SEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 + + I G+ R ++D NRR++I++ Sbjct: 279 TAE--ITIKGYGESRPIASNDTAEGKQKNRRVEIII 312 >gi|260174718|ref|ZP_05761130.1| OmpA/MotB domain protein [Bacteroides sp. D2] gi|315922978|ref|ZP_07919218.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696853|gb|EFS33688.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 297 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 93/244 (38%), Gaps = 10/244 (4%) Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163 TK + + ++ R + L+ +Q++ D + + + Sbjct: 31 TDYTKLQTEYQESQLQLRENQARSTSLEERLAEAQRNNSELRKSLSDMQSILNKSLTQSS 90 Query: 164 EKSINKEENYFLPPLSKEKILAM-KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + ++N + S I + K K R L + + L+ + ++ + + + Sbjct: 91 QGNMNMGKLIDEINASNRFIQHLVKEKNRSDSLNLVMVNKLTRSLTREEMRDLDIKVLKG 150 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNI 280 + IS+ D ++ S + VL KI +++ + + G+TD P R Sbjct: 151 VVYISLADNM---LYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTN 207 Query: 281 ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 R+NW LS RA S Q L G++ R++ G +D + NRR +I+ Sbjct: 208 IRNNWDLSALRASSVVQALQNIYGINPKRLTAA-GRGEFNPVAGNDTAEGKARNRRTEII 266 Query: 338 VEDR 341 + + Sbjct: 267 ITPK 270 >gi|302338088|ref|YP_003803294.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293] gi|301635273|gb|ADK80700.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293] Length = 242 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 10/157 (6%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249 R + L + +S + + V + G++I++ F +S+ E+ Sbjct: 87 RGRALDEARRKAISQFEPEIKSQKVRVQQDERGLIITLASD---AFFKPASAEVQIEESR 143 Query: 250 VVLQKIGEVLAHSTEV-ISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 LQK+ +L I GHTD++P NW LS DRA + L+ GV+E Sbjct: 144 ETLQKLSALLRSMPGRKFRIEGHTDSTPTDPTGPWPTNWELSTDRATNVLHYLVDFGVTE 203 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 ++ +++GFA + NRR+DI++ Sbjct: 204 NQF-QVAGFADTVPLASESTEEGKAYNRRVDIIILSD 239 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 3/149 (2%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS---KG 82 P +W Y D +T+L+ FF++++ + DD I F+ G + Sbjct: 12 CPTGSPAWMNTYGDMVTLLLTFFVMLYTTSTPDDSKMNLILAAFSGLGMYTGGQTLQEGK 71 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 + + N ++DE K + +QK + Q+ E + S Sbjct: 72 LAELGNMIMSLPSTNRGRALDEARRKAISQFEPEIKSQKVRVQQDERGLIITLASDAFFK 131 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 ++ + E + L K + L +S+ + Sbjct: 132 PASAEVQIEESRETLQKLSALLRSMPGRK 160 >gi|297568668|ref|YP_003690012.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296924583|gb|ADH85393.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 288 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 7/105 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD + + LQ I +L + + I+GHTD+ A N +LS RA S Sbjct: 185 LFDYDRATLQQASSKQLQGIVTLLHDHPDLRLEIQGHTDSD---GSAAYNLQLSQRRAES 241 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L+ G+ R+ G+ +D + NRR++++ Sbjct: 242 VLNYLLLFGIDPSRLKS-KGYGETMPVAPNDTAENKAKNRRVELV 285 >gi|254508437|ref|ZP_05120557.1| outer membrane protein OmpA [Vibrio parahaemolyticus 16] gi|219548647|gb|EED25652.1| outer membrane protein OmpA [Vibrio parahaemolyticus 16] Length = 323 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ +SS PE+ L ++ + + + + G+TD++ A N +LS R Sbjct: 211 GSGNFELNSSKLKPESTQKLNELVAFMNQYPQSTVEVVGYTDST---GAAAYNQKLSEKR 267 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + L G+ RI +SG + +++ NRR+++ V Sbjct: 268 AQAVANELEAQGIDASRI-TVSGQGENNPVASNETKEGRMMNRRVEMTV 315 >gi|70729258|ref|YP_258995.1| outer membrane protein OprF [Pseudomonas fluorescens Pf-5] gi|68343557|gb|AAY91163.1| outer membrane protein OprF [Pseudomonas fluorescens Pf-5] gi|154759407|gb|ABS85198.1| major outer membrane porin [Pseudomonas fluorescens] Length = 325 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P + ++ + + + + ++ GHTD+ N +LS RA + Sbjct: 219 FDFDKSVVKPNSYADIKNLADFMKQYPQTTTVVEGHTDSV---GPDAYNQKLSERRANAV 275 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 QVL+ GV +R+ + G+ R + NRR++ VE Sbjct: 276 KQVLVNQYGVGANRVQSV-GYGESRPVADNATEAGRAVNRRVEASVEA 322 >gi|256425383|ref|YP_003126036.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] gi|256040291|gb|ACU63835.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] Length = 449 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 6/113 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 I D F+ + S + L ++ E+L + + GHTD A N L Sbjct: 340 IKDAIQNLEFEFAKSSIKASSYPSLDRVAEMLRTKGFSLKLGGHTDNV---GNATKNMAL 396 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 S DRA S Q L++ G + +I + G+ ++ ++ NRR++ + Sbjct: 397 SKDRAESVKQYLVEHGANPSKIEAV-GYGANQPIASNKTAAGRQKNRRVEFTI 448 >gi|326334952|ref|ZP_08201152.1| outer membrane protein OprF [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692757|gb|EGD34696.1| outer membrane protein OprF [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 376 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 66/169 (39%), Gaps = 7/169 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 +E I+ ++RL + K+ + E + I T + Sbjct: 205 KALEEPIVDHVERERLPKIKKERKRITKARPITRVETPEEREARTIRVTKEINLYAKTIL 264 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +I + +L I +++ + + + GHTD + N +LS +RA + Sbjct: 265 FDLDKAIVKTQAEFILDNIAKIMQENEDFNFVIEGHTDNT---GTPEHNLQLSQERADAI 321 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L+ G+++ R+ G+ R ++D NRR++I V + Sbjct: 322 RAYLVNKGINKKRLEA-KGYGLSRPLESNDTERGREINRRVEINVIPDE 369 >gi|167588461|ref|ZP_02380849.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu] Length = 223 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 10/178 (5%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + K + + + A K A + S L + + V G+ Sbjct: 51 QLAKYNALDVRFQALAQQAAGKTNAPAHADAAQAWSALLKSLKE--QGQVTVVNAAHGVE 108 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI-ARD 283 I I + +F+ + LP+ VL +I VL I + GHTD+ P Sbjct: 109 IGINAK---ILFNVGDARLLPDASGVLARIAGVLKAHPATSILVEGHTDSVPISTAKYES 165 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 NW LS RA + + L++ GV R++ I G A + +A D + NRR+ I V+ Sbjct: 166 NWELSSARAGAVVRYLVERGVEPHRLAAI-GRADNLPLVAGDDAAARAKNRRVTIFVQ 222 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 4/47 (8%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATD----DDTKKAIEQY 68 G W I YAD +T LM FL ++++ D +A+ Q Sbjct: 22 EGAQSGRWLISYADLVTTLMVLFLALYVLQLAKYNALDVRFQALAQQ 68 >gi|289806378|ref|ZP_06537007.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 130 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 47/103 (45%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 +++K++ GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 6 HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 +T I + ++P + + N +LK Sbjct: 66 PLATAVTGGNRIANSKSPIPGGGDDYTQQQGEVEKQPNIDELK 108 >gi|225012121|ref|ZP_03702558.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A] gi|225003676|gb|EEG41649.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A] Length = 298 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 98/289 (33%), Gaps = 13/289 (4%) Query: 59 DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG-- 116 I + ++K D ++ + L T+ + DL Sbjct: 1 MKKYSFIVLLVLMVIVSSCVSTKVFNDLESRYSVLKMERRSLEKSRDSTQQAFDLLNQKW 60 Query: 117 -STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 T Q R + + +K ++ + + + L Sbjct: 61 QETEGYLQRSRDSVSEGLSQLKILRKEYALLEQNSDQKIQESIGANNALLKEIAVKEAQL 120 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 S+ ++ ++ LS + + KG+ E + IS+ N Sbjct: 121 LARSERVDQLELLMSEQKEALLELKKRLSDALLNFEGKGLTVEQRNGKVYISM---ENKL 177 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIA--RDNWRLSLDRA 292 +F S + L ++G VLA + +++ + GHTD PF NW LS RA Sbjct: 178 LFKSGSWNVGSQGQEALGQLGTVLAENPDIVVVIEGHTDNVPFSPKEALESNWDLSTKRA 237 Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 + ++L+ + V ++ G + + ++ + NRRI+I++ Sbjct: 238 TAVVKILLNNESVLPQNLTAA-GRSEYVPIAPNNNATGRAVNRRIEIIL 285 >gi|51702435|gb|AAU08790.1| OmpA [Bordetella ansorpii] Length = 178 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L ++ + I GHTD+ N +LS RA S Sbjct: 72 FFDFDKSTLKPEGRQLLDQVASQVNTINLETLIAVGHTDSI---GSDAYNQKLSERRAAS 128 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+ G+ +RI G + ++ + NRR++I + + Sbjct: 129 VKSYLVSKGIDANRIYT-EGKGEKQPVASNSTREGRAKNRRVEIEIVGTR 177 >gi|260062810|ref|YP_003195890.1| putative flagellar motor protein MotB [Robiginitalea biformata HTCC2501] gi|88784378|gb|EAR15548.1| putative flagellar motor protein MotB [Robiginitalea biformata HTCC2501] Length = 287 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 85/213 (39%), Gaps = 12/213 (5%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK---RLQ 193 E + E ++ T L + L L ++ + K + R Sbjct: 60 QTLEEQNAFLKANNQELINNMGNLTTLTAKGAENLEKSLESLKEKDLTIRKLQDAVTRRD 119 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + + +L G++ + + + + + +SI D+ +F S VL Sbjct: 120 SVNLALVQSLKGVLGNLDDEDIEISVEKGVVFVSISDKL---LFSSGSYNVTNAAKNVLG 176 Query: 254 KIGEVLAHSTEV-ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLM-KSGVSEDRIS 310 K+ +V+ + + + GHTD P+R + DNW LS RA S ++L GV R++ Sbjct: 177 KVAQVVNNKPDFEFMVEGHTDNVPYRSGVLLDNWDLSAKRATSVVRILQNDFGVDPARMT 236 Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 G +++ ++D + NRR I+V + Sbjct: 237 AA-GRSYYVPLASNDTAANRAKNRRTRIVVLPK 268 >gi|15606305|ref|NP_213684.1| flagellar motor protein MotB [Aquifex aeolicus VF5] gi|2983507|gb|AAC07084.1| flagellar motor protein MotB [Aquifex aeolicus VF5] Length = 235 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 13/154 (8%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 K L+ +A++I + +S + T + I + + F + E Sbjct: 88 KELKKVAQEIKAEMSKR-----GIWSDYALTGECLRIRVNTDK---FFPPGEDTLMKEAK 139 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSED 307 ++ + L + I GHTD P NW LS+ RA S +V K G D Sbjct: 140 GLILGLCYKLKPYALPVDIEGHTDNRPISTPRFPSNWELSMARAISVIEVFEKECGYPSD 199 Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 ++S + G+A + ++D NRR++ V+ Sbjct: 200 KLSAL-GYADTKPIASNDTPQGRQKNRRVEFCVK 232 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 4/63 (6%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK----KAIEQYFNPFGKNLM 77 + +W + D M++L+ FF++++ ++ + K I F Sbjct: 4 KKKEECPKPPAWLTSFGDLMSLLLTFFILLYSMSIISLEKFYQVLKGIVSAFGAQSVVFE 63 Query: 78 TAS 80 + Sbjct: 64 EGT 66 >gi|323495403|ref|ZP_08100480.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546] gi|323310326|gb|EGA63513.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546] Length = 322 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +SS E+ +L ++ + + + + I G+TD+ A N +LS R Sbjct: 211 DSGSFALNSSELKEESKSILDELVQFMNQYPQANVEITGYTDS---SGAAAYNQKLSEKR 267 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A S L G+ RI +SG + +++ NRR++I+V Sbjct: 268 AQSVANALESEGIDSSRI-TVSGEGENNPIASNETREGREQNRRVEIVV 315 >gi|255036139|ref|YP_003086760.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254948895|gb|ACT93595.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 295 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 9/174 (5%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + + K + L + L +AD + V E + + +S+ D+ Sbjct: 112 AMMDQQGAQIRDLNKSIQHKDSLNMALVLNLKRSLADVSDEDVQIEVKKGVVYVSLSDKM 171 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLD 290 +F SS+ VL K+ ++L E+ I I GHTD P DNW LS+ Sbjct: 172 ---LFRSGSSVINSAADNVLSKVAKILNDYKEIEILIEGHTDNVPIATDKVADNWDLSVL 228 Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 RA + + L K GV R+ G + K+A+D P S NRR +I++ + Sbjct: 229 RATAVARTLQKKYGVEPVRMIAG-GRGEYLPKVANDSAPNRSLNRRTEIIITPK 281 >gi|315179386|gb|ADT86300.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218] Length = 332 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 15/163 (9%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + M ++ + + + K V + ++ F Sbjct: 173 DNQPAPVMAEEQPVAEPQPVVEQAPVQEPVAAEPKMVTKTVAFQKL--------DSKSFA 224 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 +S+ E L + L + + I GHTD++ N +LS RA Sbjct: 225 HNSAKMSEEGKAQLGDLVAFLNEHPQANVEITGHTDST---GAEAYNQKLSEKRAQGVSD 281 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L + G+ RI+ G ++ NRR++I++ Sbjct: 282 ALQEKGIDAARITA-KGEGESNPIASNATAAGREQNRRVEIVI 323 >gi|13470497|ref|NP_102066.1| hypothetical protein mlr0220 [Mesorhizobium loti MAFF303099] gi|14021239|dbj|BAB47852.1| mlr0220 [Mesorhizobium loti MAFF303099] Length = 216 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 10/143 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + L GV + I++++ F+ P VL + V Sbjct: 77 MDQNEAELRRQLEGTGVSVTRSGDQIILNMPSDIT---FNVDQDAVKPGFYPVLNSVALV 133 Query: 259 LAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + GHTD++ + N+ LS RA + L GV + R ++GF Sbjct: 134 LKKFKQTTVDVFGHTDST---GGDQHNFDLSQRRALAVANYLSGQGVDQRRF-AVTGFGK 189 Query: 318 HRLKIASDPMNSA--NRRIDILV 338 R ++ NRR++I + Sbjct: 190 TRPIASNATAAGREQNRRVEIQL 212 >gi|149922900|ref|ZP_01911321.1| OmpA domain protein [Plesiocystis pacifica SIR-1] gi|149816217|gb|EDM75723.1| OmpA domain protein [Plesiocystis pacifica SIR-1] Length = 517 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 81/274 (29%), Gaps = 12/274 (4%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 G ++ + + + +D DE T N + G ++ Sbjct: 249 GLSVTLGREKAKPAGDRDGDGLTDDVDSCPDEPETVNDYQDEDGCPEPDSDGDGFIDDKD 308 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR- 191 N ++ + E +D D + S E ++ R Sbjct: 309 TCPNEAETVNDYQDEDGCPESDRDGDGFWDDQDSCPDEAETVNDYKDEDGCPESDRDGDG 368 Query: 192 -LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L +L K + + + + F+ S + Sbjct: 369 ILDELDKCPDEPETANGYQDEDGCAD---EVPKEVAAFTGAIKGITFETDSDKIRKSSTR 425 Query: 251 VLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L K +VL ++ + GHTD+ N LS RA S L++ G+ RI Sbjct: 426 TLDKAVKVLTDFPDIRIKVTGHTDSR---GDHDHNVDLSKRRAESVKTYLVEHGIDASRI 482 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + GF + +D NRRI+ + R Sbjct: 483 TT-DGFGPDKPVDTNDTRAGRANNRRIEFEIVQR 515 >gi|148254500|ref|YP_001239085.1| putative outer membrane protein and related peptidoglycan-associated (lipo)proteins [Bradyrhizobium sp. BTAi1] gi|146406673|gb|ABQ35179.1| putative outer membrane protein and related peptidoglycan-associated (lipo)proteins [Bradyrhizobium sp. BTAi1] Length = 707 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 65/186 (34%), Gaps = 18/186 (9%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 K D+ + + KE A +L D+ + L + Sbjct: 537 AAKDADITIEGEAIYDKSAEQVRKELTDAAGGDVKLADVRIGLKPESPPLPTEACQPAFN 596 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275 + I FD S+ E++ +L I V + I I GHTD Sbjct: 597 GLLAKGRIR-----------FDTGSAELSRESLALLDHIVVVAQRCKDAEIVIEGHTDNV 645 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333 DN LS RA + + ++G+ R++ G+ R ++D + NRR Sbjct: 646 ---GDEEDNMDLSKRRAVAVVGYIGEAGIDTSRMTSA-GYGQTRPIASNDTAEGRAQNRR 701 Query: 334 IDILVE 339 I+ +V+ Sbjct: 702 IEFVVK 707 >gi|330807884|ref|YP_004352346.1| OmpA/MotB, OmpA family protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375992|gb|AEA67342.1| Conserved hypothetical protein; putative OmpA/MotB, putative OmpA family protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 241 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 8/119 (6%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARD 283 +I++ D +FD S E L + L+H + I + GHTD+ Sbjct: 128 VITLND-AGKVLFDFDKSDLTAEARSQLDGLMGKLSHANVASIRVVGHTDSV---GSDAY 183 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 N LS RA S + L+ G++ D+++ G ++ + NRR+++ ++ Sbjct: 184 NQGLSERRASSVVEYLLTQGLAPDKLTS-EGKGESEPVADNETDEGRAQNRRVELHIQR 241 >gi|167032610|ref|YP_001667841.1| OmpF family protein [Pseudomonas putida GB-1] gi|166859098|gb|ABY97505.1| OmpF family protein [Pseudomonas putida GB-1] Length = 344 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272 V + + ++ FD S+ P + ++ + + + + ++ GHT Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 274 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + QVL + GV R+ + G+ R + Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSV-GYGETRPVADNATEEGRA 330 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 331 INRRVEAQVEA 341 >gi|159025748|emb|CAO02048.1| outer membrane protein A [Bordetella holmesii] Length = 163 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 7/106 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S+ PE +L ++ + I GHTD+ N +LS RA S Sbjct: 59 FFDFDKSVLKPEGRQLLDQVAQQAKAIDLETIIAVGHTDSI---GTEAYNLKLSDRRAAS 115 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 L+ G+ +RI G + + + NRR++I + Sbjct: 116 VKAYLVSKGIDPNRIYT-EGKGEAQPIATNKTAEGRARNRRVEIEI 160 >gi|308271290|emb|CBX27898.1| hypothetical protein N47_G32220 [uncultured Desulfobacterium sp.] Length = 310 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 90/278 (32%), Gaps = 15/278 (5%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 + F P + + + ++ E S DL+ + G + Sbjct: 45 AEQFAPAELHKAHEALAVAEQSFIDEPDSHTTKDLA----YVAQRKSEQAGVLGAMAANK 100 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 ++N QQ+E K S+ + + + ++ + Sbjct: 101 EVKNKSNAEFRDQQTEIVKQGKQNLSDSEMKTTAARAELDKLATVKEVKDKSDAEFRNQQ 160 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + ++ + + A+ + K + G+++++ +F + S L Sbjct: 161 AEIVEQGKQNLFDSEMRTAAAQAE-LAKLAAVKEEERGLVVTL---SGGVLFQSAKSTLL 216 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P V L ++ + L + GHTD+ N LS RA + L++ G Sbjct: 217 PSAQVKLDQVAKALLSIPARNLIVEGHTDSI---GSESYNQGLSQRRADAVRDYLVQKGY 273 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 DRI G + NRR++I++E Sbjct: 274 PADRIQA-RGKGEGSPIADNTSPEGRANNRRVEIVIER 310 >gi|325274538|ref|ZP_08140599.1| OmpF family protein [Pseudomonas sp. TJI-51] gi|324100318|gb|EGB98103.1| OmpF family protein [Pseudomonas sp. TJI-51] Length = 345 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272 V + + ++ FD S+ P + ++ + + + + ++ GHT Sbjct: 216 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 275 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + QVL + GV R+ + G+ R + Sbjct: 276 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSV-GYGETRPVADNATEEGRA 331 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 332 INRRVEAQVEA 342 >gi|190892542|ref|YP_001979084.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli CIAT 652] gi|190697821|gb|ACE91906.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli CIAT 652] gi|327192440|gb|EGE59397.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli CNPAF512] Length = 221 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A G+ I++++ FD P L + Sbjct: 78 NYMDQQEAELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 134 Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + +I + GHTD++ + N LS RA S L G+ + R+S + GF Sbjct: 135 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 190 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 + ++ + NRR++I + Sbjct: 191 GPSQPVASNASEAGRAQNRRVEIQI 215 >gi|86358413|ref|YP_470305.1| outer membrane lipoprotein [Rhizobium etli CFN 42] gi|86282515|gb|ABC91578.1| outer membrane lipoprotein [Rhizobium etli CFN 42] Length = 221 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A G+ I++++ FD P L + Sbjct: 78 NYMDQQEAELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 134 Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + +I + GHTD++ + N LS RA S L G+ + R+S + GF Sbjct: 135 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 190 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 + ++ + NRR++I + Sbjct: 191 GPSQPVASNASEAGRAQNRRVEIQI 215 >gi|241205517|ref|YP_002976613.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859407|gb|ACS57074.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 221 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + S L A G+ I++++ FD P L + Sbjct: 78 NYMDQQESELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 134 Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + +I + GHTD++ + N LS RA S L G+ + R+S + GF Sbjct: 135 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 190 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 + ++ + NRR++I + Sbjct: 191 GPSQPVASNASEAGRAQNRRVEIQI 215 >gi|326392537|ref|ZP_08213903.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200] gi|325991422|gb|EGD50048.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200] Length = 114 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 5/106 (4%) Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVL 299 S+ PE VL KIG +L I + G TD P N NW LS+ RA + ++L Sbjct: 1 SADVHPEEKDVLIKIGNMLKTLPNHIRVEGFTDDLPMHNSKFDSNWELSVIRATNVVKIL 60 Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G+ RIS + G+ +R + +D NRR+DI++ + + Sbjct: 61 VNEVGIEPQRISAV-GYGEYRPVVPNDSEEHRRLNRRVDIVIMNTE 105 >gi|313497484|gb|ADR58850.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1] Length = 239 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 7/116 (6%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDN 284 + +D MF S+ P LQ + L + + + GHTD+ N Sbjct: 127 VITLDDNGAVMFAFDSAELTPAAQQRLQGLVAKLNSPTVAKVRVIGHTDSV---GSDSYN 183 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 LS RA S + L+ G+ +++ G ++ + NRR+++ + Sbjct: 184 QALSERRASSVAEYLIGQGLEMGKVTS-QGRGESEPVTDNETEEGRARNRRVELHL 238 >gi|257470361|ref|ZP_05634452.1| Outer membrane porin F [Fusobacterium ulcerans ATCC 49185] gi|317064570|ref|ZP_07929055.1| outer membrane porin F [Fusobacterium ulcerans ATCC 49185] gi|313690246|gb|EFS27081.1| outer membrane porin F [Fusobacterium ulcerans ATCC 49185] Length = 186 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 62/178 (34%), Gaps = 15/178 (8%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + +N L L E+ + + K + + V +++S Sbjct: 20 SSVDNQPLKELVIEETENQFVMEDIDVSKKTLEEIIVFNEKG-----VTIRREGNNLVLS 74 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 + +FD + + L + + L + ++ I G+TD F N Sbjct: 75 M---PELVLFDFNKYEVKNKIKGSLNALAKALEENPDIRIKIDGYTD---FIGSEGYNLE 128 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 LS+ RA + L GV I I G+ ++ + + NRR++ ++ + Sbjct: 129 LSVKRADAIKDYLTNKGVKASNI-SIEGYGKQNPIASNQTETGRAKNRRVEFIISRDK 185 >gi|227536270|ref|ZP_03966319.1| flagellar motor protein MotB [Sphingobacterium spiritivorum ATCC 33300] gi|227243877|gb|EEI93892.1| flagellar motor protein MotB [Sphingobacterium spiritivorum ATCC 33300] Length = 301 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 97/260 (37%), Gaps = 16/260 (6%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 S K ++ + + Q+ Q E S +Q + K + + E Sbjct: 23 SSGKFKSLQTDYDKLQTEHRDLAQKYQQGQLDLTEGRTRIKSLEEQLAYEKANNAQLKEA 82 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL-------QDLAKKISSTLSGL 206 +L K+ D + N + N + L E + K + L L +++ L+ Sbjct: 83 YANLQKTLDNSINQNSQGNVNISKLVDEINASNKYIQHLVNTKNKSDSLNMVLTNNLTRS 142 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV- 265 ++ +K V + + + IS+ D ++ S + L KI +++ + Sbjct: 143 LSREEMKDVDVQVLKGVVYISLSDNM---LYKSGSYEISDKAGETLSKIAKIIQDYKDYE 199 Query: 266 ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323 + I G+TD P + R+NW LS RA S Q L GV R++ G + Sbjct: 200 VLIEGNTDTDPISKTNIRNNWDLSTLRASSVVQALQNTYGVDPKRLTAG-GRGQYNPIAD 258 Query: 324 SDPMNS--ANRRIDILVEDR 341 + NRR I++ + Sbjct: 259 NSTAAGKMKNRRTQIIITPK 278 >gi|170691988|ref|ZP_02883152.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] gi|170143272|gb|EDT11436.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] Length = 217 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 ++ FD +S P VL ++ + L + E + + GHTD++ N LS++ Sbjct: 103 PSSVTFDTNSYAIKPSFAPVLDQLTQTLQQNPEVIAQVVGHTDST---GQPAYNQTLSVN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 RA S L + GV+ R+S G ++ ++ +ANRR++I + Sbjct: 160 RAQSVTGYLAQRGVAPQRLSA-EGMGQNQPIADNNTEAGRAANRRVEIYLRA 210 >gi|220924409|ref|YP_002499711.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219949016|gb|ACL59408.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060] Length = 337 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 112/326 (34%), Gaps = 27/326 (8%) Query: 37 YAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQ 95 Y D T+L++ V++++ + Q + L ++ I + + Sbjct: 18 YVDALTTLLLS---VVFLLTIFVTGQF-FLSQEISGRDSVLDRLNRQIAELTDLLALERS 73 Query: 96 NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155 + L ++++ + + ++ Q + ++ + Sbjct: 74 GRRTLEETTAALRSNLQ-ESETERRRLQDALTADQGAQGKATELGRQLDVEKGATNRALS 132 Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + + ++ ++ L+ + + + R+ DL +++ L+ V + Sbjct: 133 QVELLSQQIAAMRQQLAALEEALAASETRDRESQARIADLGSRLNVALAQRVQELARYRS 192 Query: 216 LFETTRTGILISIIDQR---------NTPMFDKSSSIPLPETIVVLQKIGEVLA------ 260 F IL + D R + +F + E L +I + Sbjct: 193 DFFGRLRQILGNRSDIRIVGDRFVLQSEVLFAAGQASLRAEAGPELDRIATAIRELNRQI 252 Query: 261 --HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 V+ + GHTDA P + A NW LS RA + Q L+ G+ + + F Sbjct: 253 PSDIPWVLRVDGHTDARPISSSAFPSNWALSAARAIAVVQYLVGRGIPPQHLLAGA-FGE 311 Query: 318 HRLKI--ASDPMNSANRRIDILVEDR 341 + SD + NRRI++ + +R Sbjct: 312 FQPIDTGTSDEAYARNRRIELKLTER 337 >gi|293369806|ref|ZP_06616382.1| OmpA family protein [Bacteroides ovatus SD CMC 3f] gi|292635228|gb|EFF53744.1| OmpA family protein [Bacteroides ovatus SD CMC 3f] Length = 297 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 9/160 (5%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 K K R L + + L+ + ++ + + + + IS+ D ++ S Sbjct: 115 KEKNRSDSLNLVMVNKLTRSLTREEMRDLDIKVLKGVVYISLADNM---LYKSGSYEISN 171 Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SG 303 + VL KI +++ + + G+TD P R R+NW LS RA S Q L G Sbjct: 172 KAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTNIRNNWDLSALRASSVVQALQNVYG 231 Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 ++ R++ G +D + NRR +I++ + Sbjct: 232 INPKRLTAA-GRGEFNPVAGNDTAEGKARNRRTEIIITPK 270 >gi|242280812|ref|YP_002992941.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] gi|242123706|gb|ACS81402.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] Length = 248 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 84/233 (36%), Gaps = 10/233 (4%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 + + + + + + + ++ +E+ Sbjct: 13 DPPPEEGLPPWMATFADMVTLLLCFFVLLLSFANNDLAKFKELLGSLKDAFGVQMERKEE 72 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 L ++++ KRL L +I + L A GV + + Sbjct: 73 DNLALTPSDLKRKEVKMDSNDKRLLGLVLRIKALLDEDDATRKSSGVKADQDGVVV---- 128 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRL 287 + +F+ S+ PE VL K+ +L + +RGHTD S + NW L Sbjct: 129 -STDSATLFEPGSATLRPEAHKVLDKVISILKDHNYNLVVRGHTDNSEIHSRKFPTNWEL 187 Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 S RA SA + +++ G++ R+ + G+A + + +D S NRR++ Sbjct: 188 SSARAASALRYIVEQGGIAPKRLKAV-GYADTQPLVKNDSPANKSKNRRLEFF 239 Score = 40.3 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 27/77 (35%) Query: 15 IIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 ++IK K L W +AD +T+L+ FF+++ D K + Sbjct: 5 VVIKPKNNDPPPEEGLPPWMATFADMVTLLLCFFVLLLSFANNDLAKFKELLGSLKDAFG 64 Query: 75 NLMTASKGIFDEQNPPE 91 M + P + Sbjct: 65 VQMERKEEDNLALTPSD 81 >gi|167032120|ref|YP_001667351.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1] gi|166858608|gb|ABY97015.1| OmpA/MotB domain protein [Pseudomonas putida GB-1] Length = 263 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 11/220 (5%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + ++ + + D + + + + + + A Sbjct: 39 QSDPQSSKVAALETKDAQDWLNKADKAYMDREDQKQVDQLAYLTNQRIEVAKQTIALRTA 98 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K + + + + T G L++ D +FD + + Sbjct: 99 EGELKNASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD----VLFDFNKAELK 154 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + K+ + L + E + G+TD+ A N LS RA S L+++GV Sbjct: 155 SNAYPNITKLAQFLQENPERKVIVEGYTDSV---GSANYNQSLSERRAGSVRMALVRAGV 211 Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 RI G+ + + + NRR+++ + + Sbjct: 212 DPARIVS-QGYGKEYPVADNGSNSGRAQNRRVEVTISNDN 250 >gi|254786261|ref|YP_003073690.1| hypothetical protein TERTU_2240 [Teredinibacter turnerae T7901] gi|237686902|gb|ACR14166.1| conserved repeat domain protein [Teredinibacter turnerae T7901] Length = 3228 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 92/308 (29%), Gaps = 18/308 (5%) Query: 45 MAF---FLVMWI--INATDDDTKKA-IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKI 98 MA F W + D K I+ + + T K + + + Sbjct: 2922 MALGYRFTPRWSAELGYLDLGEFKIDIQGSYQNPSEFYNTIEKLHPESGEGAFLAGMYLL 2981 Query: 99 DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158 LS + + + +Q + L D Sbjct: 2982 PLSEKVQLGARAGIFRWHGDYTTQQPANNNTVVGTNYQKGTDGFVGLVLNMDVTPRWAAA 3041 Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA--KKISSTLSGLVADNIVKGVL 216 + N ++ LS A++R + L +I + A+ + V+ Sbjct: 3042 LGWERFGFDNHNVDFINAGLSYRFGKAVRRNETTAPLKVVAEIPEAKPAIPAEPAKEYVV 3101 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275 + F +S+ LQ + L ISIR HTDA Sbjct: 3102 ISKDDCAL---FSGTLEGVTFATASAQLTEAAQHTLQNAVDALQRYPRLAISIRAHTDAV 3158 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333 A DN LS RA + Q + +GV +R+S G+ + + NRR Sbjct: 3159 ---GKAEDNLALSEARALAVQQFFVAAGVDNERLSA-RGYGEAEPVADNSTAAGRAQNRR 3214 Query: 334 IDILVEDR 341 +++ + + Sbjct: 3215 VELKLAED 3222 >gi|256425427|ref|YP_003126080.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] gi|256040335|gb|ACU63879.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] Length = 285 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 9/168 (5%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 R L + L G + + K + + + + I I D+ + Sbjct: 108 AKDAYIQDLQSAIARKDSLNMALVMNLKGAIGNLDDKDINIKVEKGVVYIDISDKM---L 164 Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYS 294 F+ S P+ VL K+ +VL + GHTD++P++ + DNW LS+ RA + Sbjct: 165 FESGSYDVTPKAKEVLGKVAKVLLNQPDIEFMVEGHTDSNPYKKGVLLDNWDLSVKRATA 224 Query: 295 AYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 +VL + I+ G + + ++D NRR I++ Sbjct: 225 VTRVLQNDYNIPPAHITAA-GRSEYLPIASNDTPEGRATNRRTRIVIL 271 >gi|104780438|ref|YP_606936.1| OmpA family outer membrane protein [Pseudomonas entomophila L48] gi|95109425|emb|CAK14126.1| putative outer membrane protein, OmpA family [Pseudomonas entomophila L48] Length = 230 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ S+ L I L + +S+ GHTD+ + N +LS RA S Sbjct: 126 FEFDSARLTANDKERLNTIATRLKKEAPSARLSVTGHTDSV---GSDKYNQKLSEARARS 182 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L++SGV + G + + + NRR +I ++ Sbjct: 183 VVEYLVESGVPRASFVSVVGAGETQPVADNATADGRAMNRRTEIKIQR 230 >gi|34556650|ref|NP_906465.1| CADF precursor [Wolinella succinogenes DSM 1740] gi|34482364|emb|CAE09365.1| CADF PRECURSOR [Wolinella succinogenes] Length = 341 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ P + ++ L + V + GHTD+ + N +LS R+ + Sbjct: 236 FPFDSAEITPAYMDEVKDFALFLENHKGVSAKLEGHTDS---KGSDAYNKKLSAKRSNAV 292 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 + L+K G+ + R+S GF R + D NRR++ ++ Sbjct: 293 KEALIKLGIDKSRLSS-EGFGEERPIADNATDEGRQKNRRVEAII 336 >gi|26988814|ref|NP_744239.1| OmpF family protein [Pseudomonas putida KT2440] gi|148548857|ref|YP_001268959.1| OmpF family protein [Pseudomonas putida F1] gi|24983615|gb|AAN67703.1|AE016401_6 outer membrane protein OprF [Pseudomonas putida KT2440] gi|148512915|gb|ABQ79775.1| OmpF family protein [Pseudomonas putida F1] gi|313499790|gb|ADR61156.1| OprF [Pseudomonas putida BIRD-1] Length = 344 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272 V + + ++ FD S+ P + ++ + + + + ++ GHT Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 274 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + QVL + GV R+ + G+ R + Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSV-GYGETRPVADNATEEGRA 330 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 331 VNRRVEAQVEA 341 >gi|261856649|ref|YP_003263932.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] gi|261837118|gb|ACX96885.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] Length = 216 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 10/149 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 ++ + L GV + GI + + F+ +S+ P+ + VLQ++ Sbjct: 75 NQMDKQAAQLQQQMANTGVEVQRQGDGIHLQAPEAIT---FNTNSATLKPQFMPVLQQLA 131 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + + I + G+TD++ A N +LSL+RA S L + GV +RI + G+ Sbjct: 132 QSVNQYPGTIVRVEGNTDST---GSASYNQQLSLNRAQSVASALSQYGVPYNRIQAV-GY 187 Query: 316 AHHRLKIASDPM--NSANRRIDILVEDRQ 342 R ++ + NRR+DIL+ Q Sbjct: 188 GMTRPIASNATAAGRAQNRRVDILIVPAQ 216 >gi|218459695|ref|ZP_03499786.1| hypothetical protein RetlK5_09429 [Rhizobium etli Kim 5] Length = 91 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 261 HSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 V+ + GHTD P RDNW LS RA S + L+ GV DR+ GF Sbjct: 8 EINWVLRVDGHTDNVPLGGTGRYRDNWELSSARATSVVKFLIGQGVPADRLVAA-GFGEF 66 Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341 + D + NRRI++ + ++ Sbjct: 67 QPIAPGDTPEARATNRRIELKLTEK 91 >gi|213584595|ref|ZP_03366421.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 161 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 47/103 (45%) Query: 12 DQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP 71 +++K++ GSWKI YADFMT +MAFFLVMW+I+ + I +YF Sbjct: 6 HPIVVVKRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRT 65 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 +T I + ++P + + N +LK Sbjct: 66 PLATAVTGGNRIANSKSPIPGGGDDYTQQQGEVEKQPNIDELK 108 >gi|254467608|ref|ZP_05081017.1| OmpA family protein [Rhodobacterales bacterium Y4I] gi|206684356|gb|EDZ44840.1| OmpA family protein [Rhodobacterales bacterium Y4I] Length = 474 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 56/169 (33%), Gaps = 7/169 (4%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P E+ ++++ L + V ++I + Sbjct: 304 DAGPKAQLERRAPPPPPPLTPTTEEQVAKVAGFLEPEIKEGIVQVFQKGNTLIIRLT--- 360 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDR 291 + MF S + ++ E L I + GH+D P R+ N LSL R Sbjct: 361 GSGMFGSGSDQLSKAFRNPVNRVAEALNDEKGKIIVAGHSDNVPIRSSRFPSNMALSLAR 420 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A S + DR+S G A + + NRRI+IL+ Sbjct: 421 AKSVMAGMANVMTDPDRLSA-EGRADKEPIADNSTRDGRAKNRRIEILL 468 >gi|116253010|ref|YP_768848.1| OmpA family outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115257658|emb|CAK08755.1| putative OmpA family outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 221 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + S L A G+ I++++ FD P L + Sbjct: 78 NYMDQQESELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 134 Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + +I + GHTD++ + N LS RA S L G+ + R+S + GF Sbjct: 135 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 190 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 + ++ + NRR++I + Sbjct: 191 GPSQPVASNASEAGRAQNRRVEIQI 215 >gi|256846250|ref|ZP_05551707.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2] gi|256718019|gb|EEU31575.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2] Length = 191 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 +I+ + FD S P+ +L+ I E + + I+I GHTD+ N++ Sbjct: 62 TIVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQNNYEITIVGHTDSI---GSNAYNFK 118 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS RA S L++ G+SEDRI I + + + NRR++ + R+ Sbjct: 119 LSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 176 >gi|124004460|ref|ZP_01689305.1| OmpA family protein [Microscilla marina ATCC 23134] gi|123990032|gb|EAY29546.1| OmpA family protein [Microscilla marina ATCC 23134] Length = 350 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 8/115 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + + FD + + P + V L K+ ++L ++ I GHTD N+ LS Sbjct: 240 RLDNVSFDFNKATFRPFSKVELDKLVKLLKQYPAIVILITGHTDNI---GTDTKNFDLSQ 296 Query: 290 DRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 RA + L K GV DRI + G + +++ + + NRR++ V + Sbjct: 297 RRAQTVANYLLTKGGVDPDRI-RTEGMGETQPVMSNNTNTGRALNRRVEFRVLKK 350 >gi|152990729|ref|YP_001356451.1| flagellar motor protein MotB [Nitratiruptor sp. SB155-2] gi|151422590|dbj|BAF70094.1| flagellar motor protein MotB [Nitratiruptor sp. SB155-2] Length = 234 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 7/138 (5%) Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 + +L+ + +F S+ P E + + S Sbjct: 97 KALLQKAGIAAEVVDHGNKVLLRVNADN---LFLPGSAYPTKEAAKYFMEFCKRFKESGF 153 Query: 265 VISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I+I G+TD P +NW LS+ RA + ++ + G R G + Sbjct: 154 RINIIGYTDNQPIHTAEFRNNWELSVYRAINILRLFVSCGYD-KRFLTAEGRGEYDPIAP 212 Query: 324 SDP--MNSANRRIDILVE 339 ++ + NRR++ +V+ Sbjct: 213 NNTPQGRAKNRRVEFVVD 230 Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 6/44 (13%), Positives = 20/44 (45%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 ++ W + + D M++L+ FF++++ ++ + Sbjct: 3 KKKKQECASIPGWLVSFGDLMSLLLTFFILLYSMSTVSVEKFYQ 46 >gi|46581013|ref|YP_011821.1| chemotaxis MotB protein [Desulfovibrio vulgaris str. Hildenborough] gi|120601691|ref|YP_966091.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4] gi|46450434|gb|AAS97081.1| chemotaxis MotB protein, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120561920|gb|ABM27664.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4] gi|311234697|gb|ADP87551.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1] Length = 243 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 71/203 (34%), Gaps = 6/203 (2%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 + +++ N + + + ++ I+ L Sbjct: 35 SKETKEGLAGYFSSDAAKMQSNNVSPVANNPFVQSTDKLDTRDFKITEVERSHYAIAQKL 94 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 ++ + + + + + + M+ S+ PE VL + +L Sbjct: 95 RQMLMADATPQSASGISADDVGVQLRVNSD-IMYAPGSAELAPEGAKVLDDVIRILKEYN 153 Query: 264 EVISIRGHTDA-SPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLK 321 + +RGHTD+ P +I NW LS RA +A + ++ G + R+ I+ +A R Sbjct: 154 LYLVVRGHTDSGEPRNSIYPSNWELSGARAAAAVRYIITHGEIKPTRLRSIA-YADTRPL 212 Query: 322 IASDPM--NSANRRIDILVEDRQ 342 + + NRR++ + Sbjct: 213 EPNTSPDSRAKNRRVEFYFHRPE 235 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 40/78 (51%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 SWK+ YADF+T +MAFFL+MWI+N T +TK+ + YF+ + + + + Sbjct: 9 SWKVAYADFVTAMMAFFLLMWILNMTSKETKEGLAGYFSSDAAKMQSNNVSPVANNPFVQ 68 Query: 92 RSSQNKIDLSIDEHITKN 109 + + + ++ Sbjct: 69 STDKLDTRDFKITEVERS 86 >gi|163759606|ref|ZP_02166691.1| OmpA/MotB [Hoeflea phototrophica DFL-43] gi|162283203|gb|EDQ33489.1| OmpA/MotB [Hoeflea phototrophica DFL-43] Length = 215 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L A GV I++++ FD S P+ L + Sbjct: 75 YMDQQEAQLRAQLQGTGVSVTRVGDKIILNMPSNIT---FDSDQSAVKPQFYETLNSVAL 131 Query: 258 VLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + ++ + GHTD++ N LS RA S L+ G R GF Sbjct: 132 VLQKFNRSLVDVAGHTDST---GSDSYNLTLSQQRAQSVSSYLISQGNDARRFYT-QGFG 187 Query: 317 HHRLKIAS--DPMNSANRRIDILV 338 R + D +ANRR++I + Sbjct: 188 ESRPIADNGTDAGRAANRRVEIQI 211 >gi|121596298|ref|YP_988194.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42] gi|222112527|ref|YP_002554791.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY] gi|120608378|gb|ABM44118.1| OmpA/MotB domain protein [Acidovorax sp. JS42] gi|221731971|gb|ACM34791.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY] Length = 216 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 7/117 (5%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLS 288 D + F + S P +L + E L ++ + I GHTD++ N LS Sbjct: 102 DIPSDISFATNRSDIQPNFRPILDRFAEGLRNNPNTEVRIVGHTDST---GSDAINNPLS 158 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 LDRA S L GV+ +RI + G ++D + NRR++I V +RQG Sbjct: 159 LDRAESTRNYLTARGVNGNRIH-VEGRGSREPVASNDTSDGRARNRRVEIYVGERQG 214 >gi|254230148|ref|ZP_04923543.1| outer membrane protein OmpA [Vibrio sp. Ex25] gi|262394952|ref|YP_003286806.1| outer membrane protein A [Vibrio sp. Ex25] gi|151937341|gb|EDN56204.1| outer membrane protein OmpA [Vibrio sp. Ex25] gi|262338546|gb|ACY52341.1| outer membrane protein A precursor [Vibrio sp. Ex25] Length = 320 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T FD +S+ PE+ L + L + + + G+TD A N ++S R Sbjct: 207 GTGSFDLNSTTLKPESAAKLDNLVAFLNEHPQANVEVVGYTDT---SGPAAYNLKVSEKR 263 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A S L++ G+ RI G + ++D NRR++I+V Sbjct: 264 AESVANALVEKGIDSSRIQA-RGEGENNPIASNDTREGRQQNRRVEIVV 311 >gi|134294581|ref|YP_001118316.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4] gi|134137738|gb|ABO53481.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4] Length = 319 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 82/278 (29%), Gaps = 18/278 (6%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + ++ ++ + IT + G + Sbjct: 47 VATTALPSTPNASAAPGAAPGTASGTVVHGTAGTITPPPANATPGQVVAGGKVPDEATKA 106 Query: 132 FYLSNSQQSEHCKNSLTR--------DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 L + + N + + ++ K + + + E Sbjct: 107 AVLQKLRDTYGAANVVDQIEVGDVATPPNWSTNVQKLLGAQLKQISKGQLKINGTQIEVK 166 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + + Q LA ++++L+ V ++ T F+ S+ Sbjct: 167 GEVHNEAQRQQLASDMANSLNPTYTIKNGLRVSASEQG---VLDQTLANRTIEFETGSAT 223 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ +L ++ LA I GHTD N LS RA + L+ Sbjct: 224 LTPQGKQILDQMAAALAKMQNRTVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITK 280 Query: 303 GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 G+ +++ +G + +D + NRRI+ V Sbjct: 281 GIQPQQMTT-TGVGPDQPIAPNDTADGRARNRRIEFRV 317 >gi|323490130|ref|ZP_08095350.1| flagellar motor protein MotB [Planococcus donghaensis MPA1U2] gi|323396178|gb|EGA89004.1| flagellar motor protein MotB [Planococcus donghaensis MPA1U2] Length = 256 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 80/204 (39%), Gaps = 9/204 (4%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + G ++ + P++ E + K ++L Sbjct: 48 AIAESFNSELQGGSGVLDEQAPVESFETSPTAELSEDPVTGESPEEVFEAKDQEELLDFQ 107 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + + + + + + TR G+ I I + +F+ S+ L + + +I +L Sbjct: 108 NKIDTYIDENGLAPRLQTDMTRKGLKIIIKE---GVLFESGSATILKGSEKITDEISNLL 164 Query: 260 -AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS-AYQVLMKSGVSEDRISKISGFA 316 +I I GHTD P NW LS RA + +L +S + S +G++ Sbjct: 165 ITDPPRMIFIEGHTDNVPAGTAEYPTNWELSSARAINFMRNLLENDKLSPQKFSA-TGYS 223 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 ++ ++D + NRR+++L+ Sbjct: 224 QYQPIASNDTPEGRAENRRVEVLI 247 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 4/135 (2%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K K + +W + YAD +T+L+A F+V++ + D AI + FN + Sbjct: 1 MKLKRKKKHEEHVDEAWLLPYADVLTLLLALFIVLFASSQVDAKKFNAIAESFN----SE 56 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 + G+ DEQ P E + ++ +T S + + +Q++ Y+ Sbjct: 57 LQGGSGVLDEQAPVESFETSPTAELSEDPVTGESPEEVFEAKDQEELLDFQNKIDTYIDE 116 Query: 137 SQQSEHCKNSLTRDS 151 + + + +TR Sbjct: 117 NGLAPRLQTDMTRKG 131 >gi|325275242|ref|ZP_08141202.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] gi|324099634|gb|EGB97520.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] Length = 231 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ S+ L I L + +S+ GHTD+ N +LS RA+S Sbjct: 127 FEFDSARLTATDKERLNTIATRLKQEAPSARLSVSGHTDSV---GSDSYNQKLSERRAHS 183 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L++SGV + G + + NRR +I ++ Sbjct: 184 VTDYLVQSGVPRSSFVSVVGAGETQPVADNATAEGRAMNRRTEIKIQR 231 >gi|255534904|ref|YP_003095275.1| OmpA/MotB domain protein [Flavobacteriaceae bacterium 3519-10] gi|255341100|gb|ACU07213.1| OmpA/MotB domain protein [Flavobacteriaceae bacterium 3519-10] Length = 230 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 7/120 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I + + N F SS L K+ +VL ++ + I+I GHTD+ + N Sbjct: 105 IRVTMKENMVNFGFDSSELTSAAKTNLDKLAQVLKNNMDTNINIYGHTDS---KGTDAYN 161 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS RA + L+ GV+ R+ + G ++D + NRR++ + + Sbjct: 162 LSLSERRAAAVRSYLISQGVASSRMLTM-GVGEKEPVASNDTDAGRAENRRVEFAITANE 220 >gi|261416280|ref|YP_003249963.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372736|gb|ACX75481.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 485 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 84/278 (30%), Gaps = 17/278 (6%) Query: 68 YFNPFGKNLMTASKGIFDEQNPP----ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 +P N + F + P + + + D + +V+ Sbjct: 212 SLDPKFNNPSLGNPNFFCQSTSPMIKRGKGKLDIGLTATDVVKEEEAVEETRNPDTDGDG 271 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + LS + + D + D + + + P + K Sbjct: 272 LCDPWVSEEGLSEKYAGVCTGFDNCPEEAEDFDGYQDDDGCPDADNDRDGLCDPWVEAKG 331 Query: 184 LAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + + + + S D+ + + F+ S Sbjct: 332 MLSQYAHICKGVDLCPEQAESLNNYKDDDGCPDEVPQPPKKVFV-----LEGVNFESGKS 386 Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 ++ + L K+ +++ E I GHTD N LS DRA + L++ Sbjct: 387 TITQDSYISLMKVVDIMETFPEATFEIVGHTDNI---GNKDKNMTLSADRANAVKNFLVE 443 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 G++E R++ G + ++ + NRRI+ + Sbjct: 444 KGIAESRMTT-QGMGDTKPVASNKTPEGRAQNRRIEFI 480 >gi|156072340|gb|ABU45492.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302328072|gb|ADL27273.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 511 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 84/278 (30%), Gaps = 17/278 (6%) Query: 68 YFNPFGKNLMTASKGIFDEQNPP----ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 +P N + F + P + + + D + +V+ Sbjct: 238 SLDPKFNNPSLGNPNFFCQSTSPMIKRGKGKLDIGLTATDVVKEEEAVEETRNPDTDGDG 297 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + LS + + D + D + + + P + K Sbjct: 298 LCDPWVSEEGLSEKYAGVCTGFDNCPEEAEDFDGYQDDDGCPDADNDRDGLCDPWVEAKG 357 Query: 184 LAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + + + + S D+ + + F+ S Sbjct: 358 MLSQYAHICKGVDLCPEQAESLNNYKDDDGCPDEVPQPPKKVFV-----LEGVNFESGKS 412 Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 ++ + L K+ +++ E I GHTD N LS DRA + L++ Sbjct: 413 TITQDSYISLMKVVDIMETFPEATFEIVGHTDNI---GNKDKNMTLSADRANAVKNFLVE 469 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 G++E R++ G + ++ + NRRI+ + Sbjct: 470 KGIAESRMTT-QGMGDTKPVASNKTPEGRAQNRRIEFI 506 >gi|107026971|ref|YP_624482.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116691833|ref|YP_837366.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia HI2424] gi|105896345|gb|ABF79509.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116649833|gb|ABK10473.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424] Length = 223 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 5/107 (4%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAY 293 +F+ + LP + VL +I + L+ T I + GHTD+ P N NW LS RA Sbjct: 116 LFNVGDARLLPHSSPVLNQIAQALSEHATGDILVEGHTDSVPIANAKYESNWELSSARAG 175 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 S + L + GV+ R++ I G A + +A D + NRR+ I V Sbjct: 176 SVVRYLTERGVAPHRLAAI-GRADTQPLVAGDDAGSRARNRRVTIFV 221 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 3/75 (4%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + G W I YAD +T LM FL ++++ A++ + + A Sbjct: 13 RDDDELEGAQSGRWLISYADLITTLMVLFLALYVLQ---LAKYNALDARYQTLARQAGGA 69 Query: 80 SKGIFDEQNPPERSS 94 + D Sbjct: 70 ATASVDAAKSDPAPP 84 >gi|148653943|ref|YP_001281036.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1] gi|148573027|gb|ABQ95086.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1] Length = 218 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 8/148 (5%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I ++ F S+ L K+ Sbjct: 73 YMENQEKQLKQQMAGTGVEVNRNPNTGNIDLV-MPGNITFAHDSTNINGSFYNTLDKLAS 131 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + + ++ GHTD+ N LS RA + L++ GVS +RI + G+ Sbjct: 132 TMVQYGDTTVNVMGHTDSV---GNPSYNQGLSERRAQAVASYLIQRGVSSNRI-RTMGYG 187 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 ++ ++ + NRR++I + Q Sbjct: 188 QNQPVASNSTESGRLQNRRVEIQIVAPQ 215 >gi|156977475|ref|YP_001448381.1| hypothetical protein VIBHAR_06262 [Vibrio harveyi ATCC BAA-1116] gi|156529069|gb|ABU74154.1| hypothetical protein VIBHAR_06262 [Vibrio harveyi ATCC BAA-1116] Length = 334 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 ++ + F+ S+ L L + + I G+TD+ A N +LS Sbjct: 215 EEYGSGTFEFDSAKLTDSVSERLDNFVNFLNEYPQAQVEITGYTDS---SGPAAYNLKLS 271 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + L+ +G+ DR ++G + NRR+ + V Sbjct: 272 ERRAQAVADYLIAAGIDADRF-TVTGMGEEDPVADNSTHEGREQNRRVVVHV 322 >gi|330980720|gb|EGH78823.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 271 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 100/247 (40%), Gaps = 12/247 (4%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + S D + + ++ I + ++E + L ++ S Sbjct: 27 DSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYLS 86 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFET 219 + + + N L K+ +++ +L K++S ++ + + Sbjct: 87 SRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTE 146 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 147 TDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST--- 199 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 +DN +LS DRA + VLM GV E RI + G+ A+ + NRR++I Sbjct: 200 GDRQDNLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQEFPVNANTSERGRAQNRRVEI 258 Query: 337 LVEDRQG 343 + D +G Sbjct: 259 VFSDEKG 265 >gi|149184216|ref|ZP_01862534.1| OmpA/MotB [Erythrobacter sp. SD-21] gi|148831536|gb|EDL49969.1| OmpA/MotB [Erythrobacter sp. SD-21] Length = 276 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 2/201 (0%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 +++ + G L + + + L + ++ + ++S Sbjct: 76 EQSAGSDGMLGGASLTDVDNYPHAAGQTGTNSLTIPRDATGGPKEGVATIKRINSRVSKM 135 Query: 203 LSGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + +++ V T TGI I ++D N MF +++ + +L I LA Sbjct: 136 IESDKELKRLMRQVRMIDTTTGIRIDLVDDANFSMFSLGTTVLTNDARELLVVIAAALAP 195 Query: 262 STEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 I++RGHTDA +R +NW LS RA Q L++ G++++R +I G A Sbjct: 196 EGGKITVRGHTDALRYRYPSRVNNWSLSAGRAEETRQTLIREGINQERFRRIEGVAATEP 255 Query: 321 KIASDPMNSANRRIDILVEDR 341 I +P + NRRI I +ED Sbjct: 256 LIGDNPSDPRNRRISISLEDS 276 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 1/123 (0%) Query: 3 SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62 S + II+KK + + ++ G+WK+ YADF+T +MAFFL++W++ AT +D + Sbjct: 2 SGAATGRNEPAPIIVKKI-TVVEAGHHGGAWKVAYADFVTAMMAFFLLLWLLGATTEDQR 60 Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 K + YF P S G + + + + T + + + K+ Sbjct: 61 KGLADYFTPTLVKTKEQSAGSDGMLGGASLTDVDNYPHAAGQTGTNSLTIPRDATGGPKE 120 Query: 123 QYQ 125 Sbjct: 121 GVA 123 >gi|330899174|gb|EGH30593.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT] Length = 271 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 100/247 (40%), Gaps = 12/247 (4%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + S D + + ++ I + ++E + L ++ S Sbjct: 27 DSGQALQQASTDFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYLS 86 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFET 219 + + + N L K+ +++ +L K++S ++ + + Sbjct: 87 SRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTE 146 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 147 TDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST--- 199 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 +DN +LS DRA + VLM GV E RI + G+ A+ + NRR++I Sbjct: 200 GDRQDNLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQEFPVNANTSERGRAQNRRVEI 258 Query: 337 LVEDRQG 343 + D +G Sbjct: 259 VFSDEKG 265 >gi|254489078|ref|ZP_05102282.1| OmpA/MotB domain protein [Roseobacter sp. GAI101] gi|214042086|gb|EEB82725.1| OmpA/MotB domain protein [Roseobacter sp. GAI101] Length = 416 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 7/168 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 +++ A +++ L + V + I + + + M Sbjct: 250 QVAELMRRAPPPPPPPPPPDVQLNRVKGFLQKEISDGIVEVFQDQQTITVRL---AGSNM 306 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSA 295 F S P L+K+ + L + + + GH+D P ++ N RLSL RA + Sbjct: 307 FGSGSDRLQPAFEEPLRKVAQALDETEGPVIVVGHSDNIPIKSSRFPSNERLSLARAEAV 366 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + L DR+ G A + + + NRRI+I++ + Sbjct: 367 MRTLEGKLAKSDRLEA-EGRAEKQPIADNSTREGRAKNRRIEIVLVRK 413 >gi|172062063|ref|YP_001809715.1| hypothetical protein BamMC406_3023 [Burkholderia ambifaria MC40-6] gi|171994580|gb|ACB65499.1| type IV / VI secretion system protein, DotU family [Burkholderia ambifaria MC40-6] Length = 434 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 73/225 (32%), Gaps = 8/225 (3%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 T L+ + + + + + + Sbjct: 214 TLITGARDALQPELSPHWRGAPPGKLPLLRSVPVWASAAVAALALFALFVFYQYHLLTQR 273 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 E + K+RL +++ L + V + ++ R MF Sbjct: 274 HVLETRILEIGKERLASAPQRLR-LSQLLRNEIARGLVTVDEDDRRSVVVF---RGDSMF 329 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAY 296 + LPE +L K+ +A + + GHTD P R+ A DN LS RA Sbjct: 330 ASGKRVVLPEIEPILNKVASEVARVGGNVLVSGHTDNQPIRSAAFADNQVLSEKRAEFVA 389 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 Q+L + G +RI + G + + NRR++I+V Sbjct: 390 QILQRDGTPAERIRAV-GKGDTQPVGDNATAAGRALNRRVEIMVT 433 >gi|4580972|gb|AAD24559.1|AF117967_1 OprF [Pseudomonas putida] Length = 338 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 8/126 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272 V + + ++ FD S+ P + ++ + + + + ++ GHT Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 274 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + QVL + GV R+ + G+ R + Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESTRVDSV-GYGETRPVADNATEEGRA 330 Query: 331 -NRRID 335 NRR++ Sbjct: 331 VNRRVE 336 >gi|172064681|ref|YP_001812331.1| DotU family type IV/VI secretion system protein [Burkholderia ambifaria MC40-6] gi|171998166|gb|ACB69082.1| type IV / VI secretion system protein, DotU family [Burkholderia ambifaria MC40-6] Length = 436 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 4/121 (3%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARD 283 S++ + MF S LP L K+G +A + +RGHTD P R+ Sbjct: 317 RRSVVVFKGDSMFASGQSTVLPVVEPALGKVGGEVARVGGSVLVRGHTDNQPIRSAVFPS 376 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 N LS RA Q+L + G DRI I G + + NRR++I+V + Sbjct: 377 NLVLSEKRAAYVAQILQQRGTPADRIHAI-GKGDTQPVGDNATAAGRALNRRVEIVVTQQ 435 Query: 342 Q 342 + Sbjct: 436 R 436 >gi|254248921|ref|ZP_04942241.1| OmpA/MotB [Burkholderia cenocepacia PC184] gi|124875422|gb|EAY65412.1| OmpA/MotB [Burkholderia cenocepacia PC184] Length = 223 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 12/170 (7%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 L + A + ++ L + + G+ I I + Sbjct: 60 QTLARQAGGAATAAVDTAKADPAPPWLAL----LDSLKSNGRISLVKAPHGVEIGIDAK- 114 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI-ARDNWRLSLD 290 +F+ + LP++ VL +I + L+ T I + GHTD+ P N NW LS Sbjct: 115 --ILFNVGDARLLPDSSPVLNQIAQALSAHTTGDILVEGHTDSVPIANAKYESNWELSSA 172 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA S + L + GV+ R++ I G A + +A D + NRR+ I V Sbjct: 173 RAGSVVRYLTERGVAPHRLAAI-GRADTQPLVAGDDAASRARNRRVTIFV 221 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 3/75 (4%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + G W I YAD +T LM FL ++++ A++ + + A Sbjct: 13 RDDDELEGAQSGRWLISYADLITTLMVLFLALYVLQ---LAKYNALDARYQTLARQAGGA 69 Query: 80 SKGIFDEQNPPERSS 94 + D Sbjct: 70 ATAAVDTAKADPAPP 84 >gi|254490409|ref|ZP_05103596.1| Thrombospondin type 3 repeat family [Methylophaga thiooxidans DMS010] gi|224464375|gb|EEF80637.1| Thrombospondin type 3 repeat family [Methylophaga thiooxydans DMS010] Length = 200 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 8/133 (6%) Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--S 267 +GV+ + + + F ++ E +L++ +L + ++ Sbjct: 70 GTPEGVIVDQDGCPLAGENLLSLTGVNFAFDKAVLTEEAKTILEEAVTLLKETDGIVEVR 129 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 + GHTD+ N LS RA S L G+ + + + G ++D Sbjct: 130 VEGHTDSI---GTEAYNQDLSQRRAQSVVDYLTSRGIDGNNLVPV-GLGESSPVASNDSK 185 Query: 327 -MNSANRRIDILV 338 +ANRR+D +V Sbjct: 186 AGRAANRRVDFVV 198 >gi|162456876|ref|YP_001619243.1| hypothetical protein sce8593 [Sorangium cellulosum 'So ce 56'] gi|161167458|emb|CAN98763.1| probable outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 210 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 68/183 (37%), Gaps = 24/183 (13%) Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + L+ E+ + RL+ L ++ L+ + Sbjct: 41 FQVDLARDLAAERATRATERARLEALESALAGPLAEGRITLTEGRIGI------------ 88 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV----ISIRGHTDASPFRNI---AR 282 R + +F+ +S+ P I +L+ + + L E I + G TD P + Sbjct: 89 --RGSILFELNSAELQPAGIALLRALADPLKAYLEHHDELIMVSGFTDDRPLTSSSRGYA 146 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 DNW LS RA + + L +GV + + GF +D + NRR++I Sbjct: 147 DNWELSAQRALTVTRALAAAGVPDTSLFAA-GFGERHPVAPNDTSENRAKNRRVEISPIP 205 Query: 341 RQG 343 R+G Sbjct: 206 RRG 208 >gi|84625147|ref|YP_452519.1| outer membrane protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578417|ref|YP_001915346.1| OmpA family outer membrane protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|84369087|dbj|BAE70245.1| outer membrane protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522869|gb|ACD60814.1| OmpA family outer membrane protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 365 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 23/254 (9%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 +E + G + + + + + + + D + Sbjct: 119 EEEFDATPNPVSPGQRKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPREN 178 Query: 163 LEKSINKEENYFLP-------PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + +P L D +++ + + Sbjct: 179 WFGDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPNSQPGQTI 238 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + + I + FD + S P+ I +L + E+L + + + GHTD+ Sbjct: 239 GPDGCPVPVSIDLKGVN----FDFNKSTLRPDAISILSEATEILKRYPDLKVEVAGHTDS 294 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------P 326 + N +LS RA + Y L K+GV R+ G+ R + Sbjct: 295 ---KGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGKSRPIAPNTNPDGSDNPE 351 Query: 327 MNSANRRIDILVED 340 + NRR ++ V++ Sbjct: 352 GRAKNRRTELNVQN 365 >gi|323343250|ref|ZP_08083477.1| OmpA family protein [Prevotella oralis ATCC 33269] gi|323095069|gb|EFZ37643.1| OmpA family protein [Prevotella oralis ATCC 33269] Length = 287 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 83/233 (35%), Gaps = 9/233 (3%) Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 ++ ++ Q + Q + S +Q K + + + Sbjct: 45 ELTNSYQTAKEQLAASQARVSSLEEQLAQQKRDYAALQNSLDKSLTNANQNNVSIDKLVD 104 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + ++ ++ K + L +++ L+ ++ +K V + + + IS+ D Sbjct: 105 QINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSKEELKEVDVQVLKGVVYISLADNM- 163 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDR 291 ++ S L KI +++ + I G+TD P R+NW LS R Sbjct: 164 --LYKSGSYEINDRAQTTLSKIAKIIMDYKDYDVLIEGNTDNVPISRENIRNNWDLSCLR 221 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A S Q L GV R++ G + ++ NRR I++ + Sbjct: 222 ASSVVQYLQNHYGVDPKRLTAG-GRGEYNPIASNGTEVGRQRNRRTQIIITPK 273 >gi|237740939|ref|ZP_04571420.1| outer membrane protein [Fusobacterium sp. 4_1_13] gi|229430983|gb|EEO41195.1| outer membrane protein [Fusobacterium sp. 4_1_13] Length = 147 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 +I+ + FD S P+ +L+ I E + + I+I GHTD+ N++ Sbjct: 18 TIVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQNNYEITIVGHTDSI---GSNAYNFK 74 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS RA S L++ G+SEDRI I + + + NRR++ + R+ Sbjct: 75 LSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 132 >gi|124006466|ref|ZP_01691299.1| outer membrane protein [Microscilla marina ATCC 23134] gi|123987879|gb|EAY27559.1| outer membrane protein [Microscilla marina ATCC 23134] Length = 693 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 7/139 (5%) Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 L+ N + V + + + N FD + P + L ++ ++L + Sbjct: 558 DLLQANHYREVKHDLYLVPLNQGQSIRLNNLFFDYNQDTLKPSSYPELNRLIKILQKHPQ 617 Query: 265 VI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 + I GHTDA A N LS RA S + L G+++ R+ + G+ R Sbjct: 618 MNIEISGHTDA---HGSADKNLTLSQARANSVLRYLTTQGIAKQRL-RAKGYGQGRPVAN 673 Query: 324 SDP--MNSANRRIDILVED 340 + + NRR++ L+ Sbjct: 674 NTTVAGRALNRRVEFLILK 692 >gi|130681|sp|P22263|PORF_PSESY RecName: Full=Outer membrane porin F; Flags: Precursor gi|151407|gb|AAA25910.1| oprF [Pseudomonas syringae] Length = 344 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 8/197 (4%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 R + + D E + + SK+ A + + + Sbjct: 149 ARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V + + ++ FD S+ P + ++ + + + + + Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTT 268 Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 + GHTD+ N +LS RA + QVL+ GV R++ + G+ + + Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESKPVADNA 324 Query: 326 PMNSA--NRRIDILVED 340 NRR++ VE Sbjct: 325 TEAGRAVNRRVEAEVEA 341 >gi|308270955|emb|CBX27565.1| hypothetical protein N47_H23870 [uncultured Desulfobacterium sp.] Length = 229 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 73/216 (33%), Gaps = 8/216 (3%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + +T +++ Sbjct: 18 CATKTQTGTLAGTGVGAAVGAGLGQAIGGNTTGTLVGAAIGAAAGGLAGGAIGNYMDRQE 77 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 ++ + + + + + ++++ + + ++ +SS P Sbjct: 78 AAMRQALADSEAASINREQQVLAQATADSSKKVRDVLTVTFKSDF-LYAVNSSTLFPGAY 136 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L ++ +V+ + I + GHTD++ A N +LS RA + L+ GV+ R Sbjct: 137 DELDRVAKVINQYPDTRIQVGGHTDST---GSAEYNQKLSEQRAQAVKNALVSRGVNASR 193 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 IS I G+ ++ +++ NRR++I + Q Sbjct: 194 ISAI-GYGENKSIASNETEAGRQQNRRVEIRIIPNQ 228 >gi|288575422|ref|ZP_06393704.1| OmpA family protein [Neisseria mucosa ATCC 25996] gi|288568103|gb|EFC89663.1| OmpA family protein [Neisseria mucosa ATCC 25996] Length = 190 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L + + E I + + + F S+ L E Sbjct: 40 YMDYQEKKLRENLKNTNIEVERQGNQIKLVMPENVT---FATGSAALSDHARNALATASE 96 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +I GHTD + N LS +RA + L GV+ R++ G+ Sbjct: 97 TLVQYPDTTLTINGHTDNT---GNDAINEPLSRNRALAVADYLQSRGVNGSRLTTA-GYG 152 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 ++ + NRR++IL+ Q Sbjct: 153 SRHPIASNATVEGRAQNRRVEILINPDQ 180 >gi|171318547|ref|ZP_02907697.1| type IV / VI secretion system protein, DotU family [Burkholderia ambifaria MEX-5] gi|171096248|gb|EDT41156.1| type IV / VI secretion system protein, DotU family [Burkholderia ambifaria MEX-5] Length = 460 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 6/171 (3%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + L + ++ + + L + + + + T +I++ Sbjct: 290 PVVSALRQARLPQGGGSPEPASVRQYAPKLAVLLAPEIARRTLQIDETADRAVITLNSD- 348 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 +F S+ LP + V+++IG+ L + + GHTD P NW+LSLDRA Sbjct: 349 --GLFASGSARVLPSQVSVIRRIGDALRDVPGRVIVVGHTDNQPPSPGKPSNWQLSLDRA 406 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 S Q+L +R G D + NRR+ I V Sbjct: 407 GSVVQLLRDEAGGLERFLA-QGRGESEPVAPDDSAADRARNRRVVITVLAP 456 >gi|78213752|ref|YP_382531.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins-like [Synechococcus sp. CC9605] gi|78198211|gb|ABB35976.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins-like [Synechococcus sp. CC9605] Length = 217 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 12/124 (9%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286 +ID + +FD S P L+ + + + I GHTD+ + N Sbjct: 97 LIDISSDILFDFDKSSLKPSAFPSLRIASKQITEMARGDVRIEGHTDS---KGADAYNQS 153 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--------MNSANRRIDILV 338 LS RA S + L+++G D + GF + ++ NRR++I+V Sbjct: 154 LSEARAESVRKWLVENGGLTDINFVVRGFGETKPIEPNETDKGEDNPAGRQRNRRVEIIV 213 Query: 339 EDRQ 342 + Sbjct: 214 NTSE 217 >gi|300772310|ref|ZP_07082180.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861] gi|300760613|gb|EFK57439.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 301 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 97/260 (37%), Gaps = 16/260 (6%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 S K ++ + + Q+ Q E S +Q + K + + E Sbjct: 23 SSGKFKSLQTDYDKLQTEHRDLAQKYQQGQLDLTEGRTRIKSLEEQLAYEKANNAQLKEA 82 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL-------QDLAKKISSTLSGL 206 +L K+ D + N + N + L E + K + L L +++ L+ Sbjct: 83 YANLQKTLDNSINQNSQGNVNISKLVDEINASNKYIQHLVNTKNKSDSLNMVLTNNLTRS 142 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV- 265 ++ +K V + + + IS+ D ++ S + L KI +++ + Sbjct: 143 LSREEMKDVDVQVLKGVVYISLSDNM---LYKSGSYEISDKAGETLSKIAKIIQDYKDYE 199 Query: 266 ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA 323 + I G+TD P + R+NW LS RA S Q L GV R++ G + Sbjct: 200 VLIEGNTDTDPISKTNIRNNWDLSTLRASSVVQALQNTYGVDPKRLTAG-GRGQYNPIAD 258 Query: 324 SDPMNS--ANRRIDILVEDR 341 + NRR I++ + Sbjct: 259 NSTAAGKMKNRRTQIIITPK 278 >gi|237718629|ref|ZP_04549110.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229452089|gb|EEO57880.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 290 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 9/160 (5%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 K K R L + + L+ + ++ + + + + IS+ D ++ S Sbjct: 108 KEKNRSDSLNLVMVNKLTRSLTREEMRDLDIKVLKGVVYISLADNM---LYKSGSYEISN 164 Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SG 303 + VL KI +++ + + G+TD P R R+NW LS RA S Q L G Sbjct: 165 KAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTNIRNNWDLSALRASSVVQALQNIYG 224 Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 ++ R++ G +D + NRR +I++ + Sbjct: 225 INPKRLTAA-GRGEFNPVAGNDTAEGKARNRRTEIIITPK 263 >gi|159025742|emb|CAO02045.1| outer membrane protein A [Bordetella hinzii] gi|159025744|emb|CAO02046.1| outer membrane protein A [Bordetella hinzii] gi|159025746|emb|CAO02047.1| outer membrane protein A [Bordetella hinzii] Length = 177 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S+ PE +L ++ + I GHTD+ N +LS RA S Sbjct: 70 FFDFDKSVLKPEGRQLLDQVAQQAGTIDLETIIAVGHTDSI---GTEAYNQKLSERRAAS 126 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 L+ G+ +RI G + + + NRR++I + + Sbjct: 127 VKAYLVSKGIDPNRIYT-EGKGELQPIATNKTAEGRARNRRVEIEIVGSR 175 >gi|160884511|ref|ZP_02065514.1| hypothetical protein BACOVA_02495 [Bacteroides ovatus ATCC 8483] gi|298481223|ref|ZP_06999417.1| OmpA family protein [Bacteroides sp. D22] gi|156110250|gb|EDO11995.1| hypothetical protein BACOVA_02495 [Bacteroides ovatus ATCC 8483] gi|298272797|gb|EFI14364.1| OmpA family protein [Bacteroides sp. D22] Length = 297 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 9/160 (5%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 K K R L + + L+ + ++ + + + + IS+ D ++ S Sbjct: 115 KEKNRSDSLNLVMVNKLTRSLTREEMRDLDIKVLKGVVYISLADNM---LYKSGSYEISN 171 Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SG 303 + VL KI +++ + + G+TD P R R+NW LS RA S Q L G Sbjct: 172 KAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTNIRNNWDLSALRASSVVQALQNIYG 231 Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 ++ R++ G +D + NRR +I++ + Sbjct: 232 INPKRLTAA-GRGEFNPVAGNDTAEGKARNRRTEIIITPK 270 >gi|5081414|gb|AAD39369.1|AF117974_1 outer membrane protein OprF [Pseudomonas sp. DC] Length = 343 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ + FD S+ P + ++ + + + + + + GHT Sbjct: 214 NVTVDANGCPAVAEVVRVQLDVKFDFDKSVVKPNSYRDIKNLADFMKQYPQTTTTVEGHT 273 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + QVL+ GV +R+S + G+ R + Sbjct: 274 DSV---GPDAYNQKLSERRANAVKQVLVNQYGVGANRVSSV-GYGETRPVADNATDAGRA 329 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 330 VNRRVEAEVEA 340 >gi|116622076|ref|YP_824232.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225238|gb|ABJ83947.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 605 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 70/228 (30%), Gaps = 7/228 (3%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 T++ K+ + + T + L + + + + E L Sbjct: 367 ETDRLKRENDAQATAALAETDRLKRENDAQATAAQNETDRLKRQNEAQALAAQNEADRLK 426 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 ++ + +A K K + + ++ +I + + Sbjct: 427 AENEAQRVAAKAASDRAAGDKAQAEAEKAQLRAQLLVQFNTVLQTRDTARGLIVNMSDVL 486 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD L ++ +LA + + G+TD+ N LS RA S Sbjct: 487 FDTGKFTLRAGAREKLARVAGILAGHPGLQMQVEGYTDSV---GSETSNQLLSERRATSV 543 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 L +G+ ++ G ++D NRR++++V Sbjct: 544 RDYLTSAGIPPASVTA-KGLGETLPVASNDNAAGRQQNRRVELVVSGD 590 >gi|311695725|gb|ADP98598.1| OmpA/MotB domain protein [marine bacterium HP15] Length = 269 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 84/247 (34%), Gaps = 8/247 (3%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 + ++ + R + + Q + + S + Sbjct: 23 SAPKDNQMVDEAKAAYEDIRTDPDVARSGDRQLRSARDQLARAERLLEEGASTAEIEHAA 82 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + E L ++ A +R+K L+ A+ + + A + + + Sbjct: 83 YLANRHAEIAREQAERAKLQQQINSAEERRKELELQARSAEAQAAQQEAAELRRQMEAMQ 142 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR 278 ++ +FD + + P + ++ E +A + G+TD++ Sbjct: 143 AEQTDRGMVL-TLGDVLFDLNRAELKPAGETTVGRLAEFMAEYENRRVRVEGYTDST--- 198 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 N +LS RA + + LM G++ RI ++ GF ++ NRR++I Sbjct: 199 GAESYNQQLSERRAEAVREALMDRGINRARI-EVQGFGEQYPVATNETPAGRQQNRRVEI 257 Query: 337 LVEDRQG 343 ++ D G Sbjct: 258 VISDADG 264 >gi|316933944|ref|YP_004108926.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315601658|gb|ADU44193.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1] Length = 284 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 103/323 (31%), Gaps = 59/323 (18%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K ++D W + +AD M ++ + + + + Sbjct: 12 KKKVEDGHAVGHGWFVTFADLMA-------LLVSF-------FVMLVSFSTQDLRKMQIV 57 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + + + + ++ ++ +K Q + + Sbjct: 58 AGSMREAFGVQQN---SRFAGVLETDGVPVQGQVKSKRNVAPDQASNTPHLEEAGGSGSA 114 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + H K S A++ L ++ Sbjct: 115 ASHAK--------------------------AEREFALASASLRQALQDVPELTEM---- 144 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + V+FE T G+ + + DQ PMF S+IP T ++ ++ L Sbjct: 145 ------------SRNVIFEETPVGLNLELTDQDGRPMFADGSAIPYERTRKLVARLAAPL 192 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 ++ ISI GHT A+ + D LS++RA + ++L + G+ ++ + G Sbjct: 193 RATSLRISIVGHTAATLMQVDDDDPLSLSINRANAVREILKQQGLPTSQVLSLVGKGDGD 252 Query: 320 LKIASDPMNSANRRIDILVEDRQ 342 PM +ANRR+ I + Sbjct: 253 PLFPDAPMLAANRRVTITLMREN 275 >gi|78356732|ref|YP_388181.1| OmpA family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219137|gb|ABB38486.1| OmpA family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 352 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 92/290 (31%), Gaps = 17/290 (5%) Query: 55 NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 NA A F P+ + + + +K + + L+ Sbjct: 71 NAIPALKYNASMHMFAPYEEVVPYGPYSKSGFEQGIMSLKADKEIFARRTPMGDGLNMLR 130 Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK----DLCKSTDLEKSINKE 170 + N + + + + +L + + ++ + +++ Sbjct: 131 PAADNMARNAAVIIVSDGESNFGSDPVAQAQALYESAPGLCLHVVSVAETEAGKAVLDRI 190 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 ++ + + ++ L K + + V+ T I++ Sbjct: 191 AALKGCSVTADAATLLADEQALNGFVKDVFYDTREVKKAPAPAPVVTPETEEVIVLR--- 247 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + F S+ E VL + ++ +++ GHTD++ N +LS Sbjct: 248 ---SVQFAFDSAEISNEAEDVLTEAATLIEEHAGKQVTLAGHTDST---GPEAYNQKLSQ 301 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 RA S L K GV +RI + GF K ++ NRR++I Sbjct: 302 RRAESVKAFLAKEGVDANRIKAV-GFGESEPKFDNNTAEGRKLNRRVEIT 350 >gi|317402977|gb|EFV83516.1| outer membrane protein A [Achromobacter xylosoxidans C54] Length = 197 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L ++ + I GHTD+ N +LS RA S Sbjct: 91 FFDFDKSTLKPEGRQLLDQVAQQARGIELETIIAVGHTDSI---GTDAYNQKLSERRAAS 147 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+ G+ +RI G ++ + NRR++I + + Sbjct: 148 VKAYLVSKGIDPNRIYT-EGKGEKNPIASNKTKEGRAQNRRVEIEIVGSR 196 >gi|283853943|ref|ZP_06371147.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B] gi|283570664|gb|EFC18720.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B] Length = 357 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 9/168 (5%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 K ++ A + +++ +L S ++ L + K + R + I+ +D+ Sbjct: 50 EEERKAELRATELERKAGELQTAYDSLVADLKGEVDSKEIRVRQFREMLEINFVDK---I 106 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAY 293 +F S+ P VL K+ VL + I + GHTDA P + NW LS R+ Sbjct: 107 LFGSGSADISPRGREVLLKVAAVLGKVKDKSIYVVGHTDAQPIHSALYPSNWELSTARSS 166 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 S + L + G++ +R + + G + ++ ++ NRR+DI+V Sbjct: 167 SVIRFLSETGGLTPERFTAM-GRSFYQPVASNATAEGRQENRRVDIIV 213 >gi|224367491|ref|YP_002601654.1| OmpA1 [Desulfobacterium autotrophicum HRM2] gi|223690207|gb|ACN13490.1| OmpA1 [Desulfobacterium autotrophicum HRM2] Length = 374 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 114/334 (34%), Gaps = 40/334 (11%) Query: 39 DFMTVLMAFFLVMWIINATDD-----DTK---KAIEQYFNPFGKNLMTASKGIFDEQNPP 90 D+++ L F +++ ++ DD + I ++ + L + G+ + P Sbjct: 42 DYVSALDNFLIILDASSSMDDRYNGNKKFVTAREIVKHLSQTLPEL-GQNAGLRSFGHSP 100 Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL--- 147 + S + + E T+ ++ K G ++ + + ++ K ++ Sbjct: 101 KVSDKLTVLFYGMEEYTQKGLNEKSGLVSRAGGTSPMHTALTAAREDLKTFSGKTAVVII 160 Query: 148 -TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK-----KISS 201 G L + + +++ + L K ++++A ++ Sbjct: 161 SDGQEAMGLKLPITLEAAQALKNQMGEDLCFYPIFVGDDEKGMHLMEEIANIGKCGFVTK 220 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQ---------------RNTPMFDKSSSIPLP 246 + + + V ++ FD SI P Sbjct: 221 ADKLMTGSGMGQFVQDVFLTKKPMVQAPAPTPIVATPPAVEKAWVVGEAYFDFDKSIIKP 280 Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 L K+ +VL + I+GHTD+ + N LSL RA + L+ G+ Sbjct: 281 AGFEFLDKVVDVLKSRPALFVKIQGHTDSI---GTRKYNDALSLRRAKAVKTYLINKGID 337 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 ++R+ GFA + ++ NRR+++ Sbjct: 338 KNRL-SCEGFAFSKPVASNKTAEGRAMNRRVELY 370 >gi|170731810|ref|YP_001763757.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169815052|gb|ACA89635.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3] Length = 316 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 88/286 (30%), Gaps = 17/286 (5%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS-VDLKIGSTNQKKQY 124 + G + G P+ + H T + +T + Sbjct: 33 AAFAQNTGATVTPVGNGTVATTALPQANPNAGGASGTVVHGTAGTIAPPPANATPGQVVV 92 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + + Q T ++ + +T S N ++ K Sbjct: 93 GGKVPDEATKAAVLQKLRDTYGATNVVDQVEVGDVATPPNWSANVQKLLGAQLKQISKGQ 152 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTP 235 +++ + + +A ++ + T + G+ +S +Q T Sbjct: 153 LKINGTQIEMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTI 212 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ S+ P+ ++L ++ LA I GHTD N LS RA + Sbjct: 213 EFETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDN---SGNRTSNIALSQARADA 269 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 L+ + +++ +G + +D + NRRI+ V Sbjct: 270 VKGYLITKNIPPQQMTT-TGVGPDQPIAPNDTADGRARNRRIEFRV 314 >gi|68304102|gb|AAY89709.1| MotB [Escherichia coli LW1655F+] Length = 144 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 49/112 (43%) Query: 3 SHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62 + + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + Sbjct: 5 DNRGSMKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKEL 64 Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 I +YF +T I + ++P + + + N +LK Sbjct: 65 IQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELK 116 >gi|299770927|ref|YP_003732953.1| OmpA family protein [Acinetobacter sp. DR1] gi|298701015|gb|ADI91580.1| OmpA family protein [Acinetobacter sp. DR1] Length = 471 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 80/271 (29%), Gaps = 17/271 (6%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P L T KG E L + ++ T+Q + + Sbjct: 213 PASLTLSTDDKGTVSECQAGIGDQGFLATLQTNVKKVFSTTQDCKVDTSQTYAASFTDKD 272 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 SL +K +++ + +P + ++ Sbjct: 273 ALAGVLGALKGVPNASLEWVGDKITLKAGDAAALEALTAKVKALVPHTEVVGAAPVTAEQ 332 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + + L + +N+ L + I+ F SS + Sbjct: 333 SVSNSLTASQTALGSIDPNNVDVNALVKALNLQIIN----------FASGSSDIPADNKA 382 Query: 251 VLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L + +L T V ++ GHTD++ A N LS RA + L GV ++ Sbjct: 383 ILDQAATLLNKVTSVKLNVGGHTDST---GNAAANKALSQRRAQAVVDYLKSKGVDASKL 439 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338 G + + NRRI+ V Sbjct: 440 VA-EGHGSDQPVAENTTEEGRFKNRRIEFSV 469 >gi|237752179|ref|ZP_04582659.1| cadF [Helicobacter winghamensis ATCC BAA-430] gi|229376421|gb|EEO26512.1| cadF [Helicobacter winghamensis ATCC BAA-430] Length = 307 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS+ PE ++ + + + I GHTD++ N +LS RA + Sbjct: 201 FPFDSSVVAPEYNAEIKDFAQSMKENPSQTAIISGHTDST---GNDEYNQKLSERRANAV 257 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 +++ GV +R+ G+ + + NRR++ Sbjct: 258 KDAIIEEGVQAERLQA-KGYGESKPIADNATKEGRQENRRVE 298 >gi|254467574|ref|ZP_05080983.1| YceI like family [Rhodobacterales bacterium Y4I] gi|206684322|gb|EDZ44806.1| YceI like family [Rhodobacterales bacterium Y4I] Length = 327 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 7/128 (5%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDA 274 F I+ Q + F S++ + L + +++ +I + GHTD+ Sbjct: 204 DFSREACTGRFEILSQGRSVNFAPSTARLDASSRDFLNSLSDIIRRCPGMIVEVGGHTDS 263 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 A N LS RA + Q L K G+ +R+ + G+ + ++ + NR Sbjct: 264 Q---GKAAWNMALSEKRAAAVNQYLQKKGIPSERLVAV-GYGETTPLVPNNTAQNRAKNR 319 Query: 333 RIDILVED 340 RI+ V + Sbjct: 320 RIEFKVLN 327 >gi|330898192|gb|EGH29611.1| outer membrane porin OprF [Pseudomonas syringae pv. japonica str. M301072PT] Length = 344 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 8/197 (4%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 R + + D E + + SK+ A + + + Sbjct: 149 ARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V + + ++ FD S+ P + ++ + + + + + Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTT 268 Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 + GHTD+ N +LS RA + QVL+ GV R++ + G+ + + Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESKPVADNA 324 Query: 326 PMNSA--NRRIDILVED 340 NRR++ VE Sbjct: 325 TEAGRAVNRRVEAEVEA 341 >gi|217978313|ref|YP_002362460.1| OmpA/MotB domain protein [Methylocella silvestris BL2] gi|217503689|gb|ACK51098.1| OmpA/MotB domain protein [Methylocella silvestris BL2] Length = 337 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 121/344 (35%), Gaps = 33/344 (9%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 ++++ D + D ++ ++ +++++++ + + GK+ + Sbjct: 7 RRRIRQVDYWPG-------FVDALSTMLL--VIIFLLSVFMLAQF-FLAREV--TGKDTV 54 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 EQ + + DE T + +L ++ + ++ + Sbjct: 55 LEKLNRQIEQLSALLALERAGKTESDEKATLLASNLDAAQKDKARLQGAIDAKAAGDGGA 114 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + + + ++ ++ LS + + + ++ DL Sbjct: 115 AAQQQLAAEKDASAAALAQIDILNQQIAALRRQLAAIEDALSASEKSGAESQAKIADLGS 174 Query: 198 KISSTLSGLVADNIV---------KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +++ L+ V + + +L + ++ ++ +F+ S ++ Sbjct: 175 RLNIALAQKVQELARYRSDFFGRLRQILGDRPGVSVVGDRFIFQSEVLFESSQAVLDTAG 234 Query: 249 IVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL 299 L K+ L +I + GHTD P ++ NW LS RA + Q L Sbjct: 235 RAELDKLASALIELEHEIPPDIPWIIRVDGHTDKKPIQSSQYPSNWSLSAARAIAVVQYL 294 Query: 300 MKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 + GVS R+ +GF + D N NRRI++ + ++ Sbjct: 295 VSKGVSPQRL-AAAGFGEFQPLDPGEGDDANRRNRRIELKITEK 337 >gi|153002898|ref|YP_001377223.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152026471|gb|ABS24239.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5] Length = 510 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 73/185 (39%), Gaps = 11/185 (5%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 D + N+++ E + + + + + + Sbjct: 333 DGDGVANRDDECPSEQGLAELKGCAAKDGDGDGVPDHQDKCPAEAGSADNEGCPRVVVEK 392 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRN 279 + + ++ FD + PE+ +L +I +VLA E+ + GH+D+ Sbjct: 393 EAKKVELREKVQ---FDTGKATIKPESAGLLDEIAKVLAEHAEITRVVIEGHSDS---SG 446 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 A N RLS RA + + L++ G++++R+S GF R ++D NRR++I Sbjct: 447 GAALNKRLSQARADAVLKALVERGIAKERLSA-KGFGPSRPIASNDTPEGREANRRVEIS 505 Query: 338 VEDRQ 342 + + Sbjct: 506 IAQSE 510 >gi|300779346|ref|ZP_07089204.1| proteobacterial sortase system OmpA family protein [Chryseobacterium gleum ATCC 35910] gi|300504856|gb|EFK35996.1| proteobacterial sortase system OmpA family protein [Chryseobacterium gleum ATCC 35910] Length = 229 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 7/120 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I + + F SS L K+ EVLA++ + I+I GHTD+ + N Sbjct: 104 IKVTMNESIVNFAFDSSNLTSVAQTNLDKLAEVLANNPDTNINIYGHTDS---KGSDDYN 160 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 +LS RA + L G++ R+ G ++D + NRR++ + + Sbjct: 161 LKLSQRRADAVKAYLTGKGIASSRMFT-KGEGEAMPVASNDTEEGRAKNRRVEFAITANE 219 >gi|332968653|gb|EGK07706.1| OmpA family protein [Psychrobacter sp. 1501(2011)] Length = 217 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 52/148 (35%), Gaps = 9/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + G + I+ F S+ P L K+ Sbjct: 73 YMENQKRQLEQQMAGTGVEVKHDGQGNIDLIM--PGNITFAHDSTNINPSFYNTLDKLAS 130 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + + ++ GHTD+ N LS RA S L+ GVS RI + G+ Sbjct: 131 TMNQYNQTTVTVMGHTDSV---GNPTYNQGLSQRRAQSVAGYLVNRGVSGARIQTL-GYG 186 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 + + NRR++I + Q Sbjct: 187 QSQPIADNSTEQGRMQNRRVEIKLNAPQ 214 >gi|254511081|ref|ZP_05123148.1| flagellar motor protein [Rhodobacteraceae bacterium KLH11] gi|221534792|gb|EEE37780.1| flagellar motor protein [Rhodobacteraceae bacterium KLH11] Length = 559 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 90/303 (29%), Gaps = 16/303 (5%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + + KA + ++ D E Sbjct: 258 FGEINAEELKAQLKAALDAQTQAQAQAEAQQSLAEERAALLAIARDTLASEQEISTEAQR 317 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + NQ+ R + + + + G+DL + S + Sbjct: 318 QTALLNQQMSALRNQLGSLQALLDDYEDRNAAAEIQIQTLGQDLNAALARAASEERRRRL 377 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-- 231 + + L ++ + + G+ I Sbjct: 378 LEEAERLRLEAEAEELAGQNQELTAQAEDLQRYRSEFFGRLRDVLGDQEGVRIEGDRFVF 437 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNI--A 281 + +FD S++ E + K+ +L VI + GHTD P Sbjct: 438 SSEVLFDTGSAVLSLEGREEVAKVANILRAVAAEIPEGLNWVIRVDGHTDNVPLAGSGRY 497 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RDNW LS RA S + ++ + G+ +R+ +GF + +D + NRRI++ + Sbjct: 498 RDNWELSQGRALSVVRYMVDALGIPPNRL-AANGFGEFQPVNPADTPDARAQNRRIELKL 556 Query: 339 EDR 341 +R Sbjct: 557 TER 559 >gi|94986930|ref|YP_594863.1| flagellar motor protein [Lawsonia intracellularis PHE/MN1-00] gi|94731179|emb|CAJ54541.1| Flagellar motor protein [Lawsonia intracellularis PHE/MN1-00] Length = 206 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 67/159 (42%), Gaps = 9/159 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 R++ + + S + + + I + + D+ +F S P+ Sbjct: 46 REEMIAAQKNTFDAIRSFITEHALGDNIKATFDNGIITLRLPDE---VLFAPGSEQLTPQ 102 Query: 248 TIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLMKSGV 304 L ++ + L + + I+I+G+TD S AR +NW LS RA + + L++ G+ Sbjct: 103 GEKALSQLRDLFLKNREQSINIKGYTDNSSVSEGARFHNNWELSALRAVNVLRKLLQGGI 162 Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 R++ +G +D + NRR++ +E + Sbjct: 163 EATRMTA-TGLGDLDPLAPNDTPENRAQNRRVEFTLERK 200 >gi|255264513|ref|ZP_05343855.1| OmpA/MotB [Thalassiobium sp. R2A62] gi|255106848|gb|EET49522.1| OmpA/MotB [Thalassiobium sp. R2A62] Length = 272 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 74/180 (41%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 ++ IIIK+K + ++ G+WK+ YADF+T +MAFF++MW++NAT ++ +K I YF Sbjct: 4 NSNVPIIIKRKKVVSGDGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTENQRKGIADYF 63 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +P + G S ++ ++ L ++ Q +E Sbjct: 64 SPTIPISRISGGGDGAFGGESVLSKDLLPEVGNLPQPSQAQAQLLGAEQDEISFNQVMEA 123 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 S + + + + DLE + +P + + AM + Sbjct: 124 LTALSGESAVIDRMLRHVITRVTDEGLIIELFDLEDQPLFIDASDVPTGVMQDLTAMIAQ 183 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 84/204 (41%), Gaps = 5/204 (2%) Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 ++R S G + E LP S+ + + ++ + + + Sbjct: 64 SPTIPISRISGGGDGAFGGESVLSKDLLPEVGNLPQPSQAQAQLLGAEQDEISFNQVMEA 123 Query: 202 TL----SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 V D +++ V+ T G++I + D + P+F +S +P + I + Sbjct: 124 LTALSGESAVIDRMLRHVITRVTDEGLIIELFDLEDQPLFIDASDVPTGVMQDLTAMIAQ 183 Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 ++ + +++ GH + P + NW +S RA + +L ++G ++++++ Sbjct: 184 IVGFVSNDLAVEGHVRSQPIVLLKNQNWEISHSRAQAIRLLLQQNGAYPQQMNRVTAHGD 243 Query: 318 HRLKIASDPMNSANRRIDILVEDR 341 + + P++ N RI+I+V Sbjct: 244 REPQYKN-PLSVRNNRIEIIVLRS 266 >gi|167744038|ref|ZP_02416812.1| hypothetical protein Bpse14_38553 [Burkholderia pseudomallei 14] Length = 379 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + V +I + R +F S+ + + VL ++ + L Sbjct: 227 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 283 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G+TD +P NW LS +RA + ++ +RI+ G Sbjct: 284 QVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 342 Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343 +D + NRR++I + G Sbjct: 343 PVAPNDSPANRARNRRVEITLMLAPG 368 >gi|167588145|ref|ZP_02380533.1| OmpA/MotB [Burkholderia ubonensis Bu] Length = 592 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 34/300 (11%), Positives = 82/300 (27%), Gaps = 25/300 (8%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 + P + G D + D+ + ++ Sbjct: 286 FDVLADRRQPAPPWRLFG-AGWIDCGPETGPGKPWERDVRTRIAVAPRALPGSTTPWPLP 344 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + S + ++ + + + E + + + Sbjct: 345 QPLIEAAPQRAWRSPRIAAVGHAFAIVACAATVAIWGAAKNNEALATRIGEHLARYNAIS 404 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ---------- 231 ++ L+ L ++ +L + D Sbjct: 405 ATHDAAKRDALRALVADRDQLDRYARTGVPLRLSFGMYHGRNLLSPLNDAIASYEPPSPP 464 Query: 232 ------RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDN 284 + +FD + P++ + E++ + GHTDA N Sbjct: 465 PSVVTLDSMSLFDSGKAALKPDSTRAMVGALELIKAHPGKRILVAGHTDAV---GKPDRN 521 Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 +LS+DRA + L+ + G++ + I G+ R + + NRR++I + Sbjct: 522 LKLSVDRAAAVRDWLVDASGIAPTQF-AIQGYGDTRPVADNATPEGRARNRRVEITLVPD 580 >gi|226944839|ref|YP_002799912.1| flagellar motor protein [Azotobacter vinelandii DJ] gi|226719766|gb|ACO78937.1| Flagellar motor protein [Azotobacter vinelandii DJ] Length = 275 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 8/186 (4%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + E+S++ LP S A + + +D+ L GL D + K + Sbjct: 88 QGNEERSLSPLSEGVLPAGSGLLEQAGRSLRDEKDVDST-GDPLQGLPVDQLGKDIEVIV 146 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279 + I + +F + + + + VLQ++ VL S I + GHTD+ P R+ Sbjct: 147 KEGTVSFRI---SSEILFSSAQADLSLDGLRVLQQLVPVLNSSRHDIVVVGHTDSLPIRS 203 Query: 280 IAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 NW LS RA S + L +GV+ R+ + G A R + + NRR+++ Sbjct: 204 TRFPSNWELSGARAGSVVRYLEANGVARQRMRAV-GLADTRPLLENSSPEGRAGNRRVEL 262 Query: 337 LVEDRQ 342 ++E Q Sbjct: 263 ILETPQ 268 >gi|292669789|ref|ZP_06603215.1| chemotaxis protein MotB [Selenomonas noxia ATCC 43541] gi|292648586|gb|EFF66558.1| chemotaxis protein MotB [Selenomonas noxia ATCC 43541] Length = 304 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 90/229 (39%), Gaps = 12/229 (5%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 ++ L +F +S + S+ + + + N + + + Sbjct: 23 SDLMTLLLALFIALFAMSQTDASKMQQLAEAFTAAFNMGGPSFFSGMGPSNSQSDASISG 82 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + +K L + +K+ + ++ V E + G++I + ++ +F Sbjct: 83 VDNGTGAYLKENADLSEAKEKLEQYIKEH---DLQDQVSTELSEEGLMIRLKER---ALF 136 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAY 296 S+ + ++ I +L+ E ++I GHTD P NW LS RA S Sbjct: 137 ASGSAQLQGQAEQIVPVIAALLSSLPERVTISGHTDNVPISTAQFPSNWELSSARAVSLM 196 Query: 297 QVLMKSG--VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + LM + ++ R S + G++ +R ++D + NRR+++ + Sbjct: 197 RGLMTAQPTLNPARFSAL-GYSEYRPIASNDTDEGRAQNRRVEVFIARS 244 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 48/125 (38%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +KK +W + Y+D MT+L+A F+ ++ ++ TD + + + F Sbjct: 1 MARKKHGKPHEEELNEAWLLPYSDLMTLLLALFIALFAMSQTDASKMQQLAEAFTAAFNM 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + N +S + +D ++ +N+ + ++ + + Sbjct: 61 GGPSFFSGMGPSNSQSDASISGVDNGTGAYLKENADLSEAKEKLEQYIKEHDLQDQVSTE 120 Query: 136 NSQQS 140 S++ Sbjct: 121 LSEEG 125 >gi|317051549|ref|YP_004112665.1| OmpA/MotB domain-containing protein [Desulfurispirillum indicum S5] gi|316946633|gb|ADU66109.1| OmpA/MotB domain protein [Desulfurispirillum indicum S5] Length = 252 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 83/217 (38%), Gaps = 5/217 (2%) Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 +++ L + + + + L D +N + P+ + Sbjct: 21 TFSDLAILLLTFFILLLSMATLDKIKIVQSLGTLRDSLGVLNLGRQTEVSPVPVVVTAQI 80 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + +++Q + + I++ + + + V ++ + I + +FD+ + P Sbjct: 81 QEVEQIQ-MEEVINAIQAMVQVTGLEDSVEVDSQQDTEGIKVT-LAEEILFDRGRAEIKP 138 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVS 305 +L ++ ++ S + I GHTD + NW LS R+ + + +++ Sbjct: 139 AAFPILDQLAAIIHQSKRKVRIEGHTDNVQVPASRYPTNWELSTARSVNVVKYFVQARNL 198 Query: 306 EDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340 + RI +G+ + + + + NRR++I E Sbjct: 199 DPRIFVAAGYGEFSPVVPNITESNRAKNRRVEIYFEG 235 >gi|4580971|gb|AAD24558.1|AF117966_1 OprF [Pseudomonas mendocina] Length = 318 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD E+ ++ + + + + + + GHTD+ N LS RA + Sbjct: 219 FDFDKDRVKEESYGDIKNLADFMNQYPQTTTTVEGHTDSV---GSDAYNQGLSERRANAV 275 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335 VL+ GV R++ + G+ R + D + NRR++ Sbjct: 276 RNVLVNQYGVDGSRVNAV-GYGETRPVADNATDSGRAINRRVE 317 >gi|70729207|ref|YP_258943.1| OmpA family protein [Pseudomonas fluorescens Pf-5] gi|68343506|gb|AAY91112.1| OmpA family protein [Pseudomonas fluorescens Pf-5] Length = 270 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 87/234 (37%), Gaps = 11/234 (4%) Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 K+ + + + S ++ + + E + E Sbjct: 39 QKVKEDSNVLRIAPKDVIRAGESLARADRLSTYWGSGGDVEHYAYLSRRYSEIAREHTEQ 98 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + + L +R + AK +S G + + + T G+++++ D Sbjct: 99 ALNNERAAKLELERQRLQLALREAKLLSVQQQGKWLEEQIISLATTQTDRGLVMTLGD-- 156 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + + K+ + L + V+ I G+TD + + N +LS DR Sbjct: 157 --VLFDTGEAELKNSANRTVLKVVQFLQLNPKRVVRIEGYTDNT---GERQSNLQLSKDR 211 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 A + VL+ G+ E RI ++ G+ A+ + NRR++I+ D +G Sbjct: 212 AQAVADVLVDLGIDEKRI-QVEGYGDDYPVEANASERGRAQNRRVEIVFSDEKG 264 >gi|304319913|ref|YP_003853556.1| flagellar motor protein [Parvularcula bermudensis HTCC2503] gi|303298816|gb|ADM08415.1| flagellar motor protein [Parvularcula bermudensis HTCC2503] Length = 343 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 118/349 (33%), Gaps = 34/349 (9%) Query: 19 KKVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 ++ + N + D T+L+ ++M++++ EQ Sbjct: 3 RRRSYTQGANIWPG----FVDGLSTLLL---VLMFVLSIFVVAQFYLGEQLTRNQQLISE 55 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 S+ + + +++++ L++ + + I L +S Sbjct: 56 QDDALTRLRAELARLSNDLSLARAEAASLSEDNAALQLDLEVLQDTIAEKDAQIASLGSS 115 Query: 138 QQSEHCKNSLTRD--SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + + R E+ ++ ++ ++ L + ++++ ++++L Sbjct: 116 VAASAEELEVERALSEEQKAEIATLNAQLAALRRQLASLQEALEAAEAKDVEQQAQIENL 175 Query: 196 AKKISSTLSGLVADNIVKGVLF---------ETTRTGILISIIDQRNTPMFDKSSSIPLP 246 ++++++ L+ V + F +F S+ P Sbjct: 176 SQRLNAALARRVNELARVRSDFLEQLAAALEGRPGFRRDGDRYIVEGDVLFGSCSTELTP 235 Query: 247 ETIVVLQKIGEVLAH--------STEVISIRGHTDASPFRNI----ARDNWRLSLDRAYS 294 VL+ + + V+ + GH D P N +LS RA S Sbjct: 236 AARDVLRTVAAAINDVRRDLDTDYEWVLRVDGHADQVPLGAACRALFDSNLQLSTRRALS 295 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS-DPMN-SANRRIDILVEDR 341 + L GV DR+ GF +A DP + + NRRI+ + +R Sbjct: 296 VVEFLSSQGVPADRLVAA-GFGDAYPLVAGRDPASLAQNRRIEFKLTER 343 >gi|332969616|gb|EGK08634.1| OmpA family protein [Kingella kingae ATCC 23330] Length = 258 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV E I +++ + F P L + Sbjct: 113 YMDYQETKLREQLANTGVEVERQGNQIKLTMPENVT---FATGRYDLSPAAQSALANAAQ 169 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 LA E +I GHTD++ N LS +RA + L + GV+ +R+ +SG Sbjct: 170 TLATYNETTITIVGHTDST---GSDAINNPLSYNRANAVASYLNQRGVAANRM-SVSGQG 225 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 + + + NRR++IL+ Sbjct: 226 SRQPIADNSTDYGRAQNRRVEILI 249 >gi|206562638|ref|YP_002233401.1| OmpA family protein [Burkholderia cenocepacia J2315] gi|198038678|emb|CAR54638.1| OmpA family protein [Burkholderia cenocepacia J2315] Length = 223 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 5/107 (4%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAY 293 +F+ + LP++ VL +I + L+ T I + GHTD+ P N NW LS RA Sbjct: 116 LFNVGDARLLPDSSPVLNQIAQALSAHATGDILVEGHTDSVPIANAKYESNWELSSARAG 175 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 S + L + GV+ R++ I G A + +A D + NRR+ I V Sbjct: 176 SVVRYLTERGVAPHRLAAI-GRADTQPLVAGDDAASRARNRRVTIFV 221 Score = 49.6 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 3/75 (4%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + G W I YAD +T LM FL ++++ A++ + + A Sbjct: 13 RDDDELEGAQSGRWLISYADLITTLMVLFLALYVLQ---LAKYNALDARYQTLARQAGGA 69 Query: 80 SKGIFDEQNPPERSS 94 + + D Sbjct: 70 ATAVVDTAKSDPAPP 84 >gi|119944065|ref|YP_941745.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37] gi|119862669|gb|ABM02146.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37] Length = 215 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 65/198 (32%), Gaps = 9/198 (4%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 + + T ++ KS + A+ + Sbjct: 21 RQNATTGEQEMNTATKSAIGGAIAGALAGAATGKKNGALFGAVGGAAIGGGVGYYFDQQE 80 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + L + + GV + L I+ FD + L + +VL Sbjct: 81 AALRQELLNSGVQVKRVGEYELQLIMADGIG--FDTGNYQLSGSIFSTLNGVAKVLNEYP 138 Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I GHTD+ + N LS RA S LM+ V R+S + G+ R Sbjct: 139 KSSLRIIGHTDSV---GSSESNLTLSERRAESVSNYLMQRNVKSGRLSTL-GYGERRPIA 194 Query: 323 ASDP--MNSANRRIDILV 338 +D +ANRR++I + Sbjct: 195 TNDTPYGRAANRRVEINI 212 >gi|325294095|ref|YP_004279959.1| porin [Agrobacterium sp. H13-3] gi|325061948|gb|ADY65639.1| porin [Agrobacterium sp. H13-3] Length = 220 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 10/150 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + S L A GV I++++ F +P L + Sbjct: 78 NYMDGQESELRAQLQGTGVSVTRRGDSIVLNMPSNIT---FATDQDQVIPPFYQTLDSVA 134 Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + +I I GHTD++ + N LS RA S L GV + RIS + GF Sbjct: 135 IVLNKFNRTLIDINGHTDST---GSQQHNQALSERRAASVANYLGARGVDQRRISTL-GF 190 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR+++L+ +G Sbjct: 191 GPSQPIASNATPDGRAQNRRVEVLISPLKG 220 >gi|167851058|ref|ZP_02476566.1| hypothetical protein BpseB_37821 [Burkholderia pseudomallei B7210] Length = 415 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + V +I + R +F S+ + + VL ++ + L Sbjct: 263 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 319 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G+TD +P NW LS +RA + ++ +RI+ G Sbjct: 320 QVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 378 Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343 +D + NRR++I + G Sbjct: 379 PVAPNDSPANRARNRRVEITLMLAPG 404 >gi|313203319|ref|YP_004041976.1| ompa/motb domain protein [Paludibacter propionicigenes WB4] gi|312442635|gb|ADQ78991.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4] Length = 817 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 79/272 (29%), Gaps = 7/272 (2%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P + + + + + +++ K K K L+++ Sbjct: 543 PDYLDKCPDTPKEAKGFIDSKGCPIDTDGDGVPDYLDKCPDTPKEAKGMVDKNGCLLDSD 602 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + + + TD + + + P+ + Sbjct: 603 GDGVPDYLDLCPNTPAEAKAFVDKNGCTLDTDGDGVPDYLDKCPNTPIEARGKVDQNGCP 662 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 R D + + + + F+ P++ Sbjct: 663 RDTDGDGIPDYLDKCPTIAGVAENEGCPAIKKEVKTLFKKALQGIQFETGKDKIKPKSYP 722 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L +I V+ + I +RGHTD A+ N LS RA S + L+ G+ R+ Sbjct: 723 ILNQIAAVMTANPTYLIEVRGHTDNV---GDAKLNQVLSQKRAESVRKYLIGKGIDSKRM 779 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + +G+ + NRR++ + Sbjct: 780 TA-NGYGDTLPVSTNSTPAGRTLNRRVEFEIT 810 >gi|255264641|ref|ZP_05343983.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62] gi|255106976|gb|EET49650.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62] Length = 223 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 10/137 (7%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + ++ V T + +++S+ +F SS L + L Sbjct: 92 ALRQSLGGNVGITNTGSELIVSLPQD---ILFATDSSTLTGGLQSDLNALANNLNQYPNT 148 Query: 266 I-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 ++ GHTD A N LS RA + VL+ +GVS RI+ G + + Sbjct: 149 TVNVIGHTDNV---GDAGYNDGLSTRRATAVANVLLNAGVSSGRINAF-GRGEAQPIATN 204 Query: 325 --DPMNSANRRIDILVE 339 D + NRR++I++ Sbjct: 205 LTDEGRAQNRRVEIVIT 221 >gi|239832093|ref|ZP_04680422.1| OmpA family protein [Ochrobactrum intermedium LMG 3301] gi|239824360|gb|EEQ95928.1| OmpA family protein [Ochrobactrum intermedium LMG 3301] Length = 260 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A GV I++++ FD + L + Sbjct: 116 NYMDRQENELRAQLQGTGVSVTRNGDQIILNMPSSIT---FDTDQDQVKSQFYPTLNSVA 172 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + + + GHTD++ N LS RA S L G+ R + G+ Sbjct: 173 IVLRKFNQTLVDVYGHTDST---GSVSHNQALSQRRAASVASYLGSQGIDPRRF-AVIGY 228 Query: 316 AHHRLKIASDP--MNSANRRIDILV 338 + + + NRR++I + Sbjct: 229 GASQPVATNATPEGRAQNRRVEIQI 253 >gi|238798865|ref|ZP_04642332.1| hypothetical protein ymoll0001_31770 [Yersinia mollaretii ATCC 43969] gi|238717266|gb|EEQ09115.1| hypothetical protein ymoll0001_31770 [Yersinia mollaretii ATCC 43969] Length = 575 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 6/110 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD S+ P + VL + I + GHTD + N LSL Sbjct: 440 DSLSLFDVGQSMLKPGSTKVLINALVGIKAKPGWLIVVAGHTD---ITGDDKSNQTLSLK 496 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S + +G + + G+ R ++D NRR++I + Sbjct: 497 RAESVRNWMRDTGDIPESCFAVQGYGQSRPLKSNDTEAGRALNRRVEISL 546 >gi|237748606|ref|ZP_04579086.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes OXCC13] gi|229379968|gb|EEO30059.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes OXCC13] Length = 217 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 11/150 (7%) Query: 197 KKISSTLSGLVADNIVKGVLFET-TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + A GV I +SI F SS P+ +L+ + Sbjct: 75 NHMEKQKQEMQAATQGTGVEVVQTENNMIRVSIPSD---VSFATGSSTLSPQFKTILRDL 131 Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L ++ I + G+TD + N LS RA S + L+ GV+ +R + G Sbjct: 132 ATTLKNNPSSSIFVVGYTDNT---GSDSVNLPLSRKRAMSVMEYLVSQGVAANRF-TVEG 187 Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQ 342 ++ + NRR++I V ++ Sbjct: 188 MGSKDPIASNATAEGRAQNRRVEIYVGQKK 217 >gi|254246487|ref|ZP_04939808.1| OmpA/MotB [Burkholderia cenocepacia PC184] gi|124871263|gb|EAY62979.1| OmpA/MotB [Burkholderia cenocepacia PC184] Length = 316 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 88/286 (30%), Gaps = 17/286 (5%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS-VDLKIGSTNQKKQY 124 + G + G P+ + H T S +T + Sbjct: 33 AAFAQNTGATVTPVGNGTVATTALPQANPNAGGASGTVVHGTAGSIAPPPANATPGQVVV 92 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + + Q T ++ + +T S N ++ K Sbjct: 93 GGKVPDEATKAAVLQKLRDTYGATNVVDQVEVGDVATPPNWSANVQKLLGAQLKQISKGQ 152 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTP 235 +++ + + +A ++ + T + G+ +S +Q T Sbjct: 153 LKINGTQIEMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTI 212 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ S+ P+ ++L ++ LA I GHTD N LS RA + Sbjct: 213 EFETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDN---SGNRTSNIALSQARADA 269 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 L+ + +++ +G + +D + NRRI+ V Sbjct: 270 VKGYLITKNIPPQQMTT-TGVGPDQPIAPNDTADGRARNRRIEFRV 314 >gi|330958963|gb|EGH59223.1| OprF [Pseudomonas syringae pv. maculicola str. ES4326] Length = 344 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 8/197 (4%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 R + + D E + + SK+ A + + + Sbjct: 149 ARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V + + ++ FD + S+ P + ++ + + + + Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFNKSVVKPNSYGDIKNLADFMQQYPSTTT 268 Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 + GHTD+ N +LS RA + QVL+ GV R++ + G+ R + Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGAGRVNSV-GYGESRPVADNA 324 Query: 326 PMNSA--NRRIDILVED 340 NRR++ VE Sbjct: 325 TEAGRAVNRRVEAQVEA 341 >gi|110834388|ref|YP_693247.1| OmpA family protein [Alcanivorax borkumensis SK2] gi|110647499|emb|CAL16975.1| OmpA family protein [Alcanivorax borkumensis SK2] Length = 362 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 7/121 (5%) Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA 281 +L + N F+ S+ + +L ++ + L T I GHTD+ A Sbjct: 245 CLLTNQTITFNNIGFELDSANITASSRPILDRLVKALKSQTNFDVEIAGHTDS---SGSA 301 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 N LS RA + Q L+ G+S +R++ G+ +++ + NRR++ V Sbjct: 302 EYNEGLSDRRAKAVRQYLIDQGISSERLTA-RGYGEVVPVASNETASGRAMNRRVEFRVS 360 Query: 340 D 340 + Sbjct: 361 E 361 >gi|108524622|ref|YP_619844.1| hypothetical protein pQKH54_47 [Plasmid QKH54] gi|99644193|emb|CAJ43326.1| hypothetical protein [Plasmid QKH54] Length = 220 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 53/170 (31%), Gaps = 10/170 (5%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 P I A + + L GV E + + + + Sbjct: 53 PGQGALIGAAIAGSAGAGYGYYVDKQEAELRESMKGSGVEVEREGDQLKLVM---PGSIT 109 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S P L ++ + + + GHTD+ N LS RA S Sbjct: 110 FATGKSEIQPSFQYTLNQLAASFRQFQDSDLIVTGHTDSV---GSYEANQVLSARRADSV 166 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 Q L +GV R+ G +D + NRR++I + R G Sbjct: 167 SQFLRSNGVDPSRLQTF-GAGSSSPIAPNDTTEGRAQNRRVEIKLVPRTG 215 >gi|4580966|gb|AAD24553.1|AF117961_1 OprF [Pseudomonas chlororaphis subsp. aureofaciens] Length = 325 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P + ++ + + + + ++ GHTD+ N +LS RA + Sbjct: 219 FDFDKSVVKPNSYADIKNLADFMKQYPQTTTVVEGHTDSV---GPDAYNQKLSERRANAV 275 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 QVL GV R+ + G+ R + NRR++ VE Sbjct: 276 KQVLTSQYGVESSRVQSV-GYGESRPVADNATEAGRAVNRRVEAQVEA 322 >gi|115526365|ref|YP_783276.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115520312|gb|ABJ08296.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53] Length = 270 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 84/216 (38%) Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + + + S + + + R K + + Sbjct: 43 STQDVRKLQIFAGSMRDAFGEQFVVRHPGKLPSNAVQPLDRTIDDSAAIEHGQDAAIATK 102 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 ++ A + + K ++F+ T + + I+D + PMF + S++ Sbjct: 103 QMKAEREFATASASLRRALQDIPELTEVTKNIIFQETSQSLALEIVDHFSRPMFRQGSAV 162 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 P T V+++K+ L + ISI GHT ++ RD + LS+ RA + ++L + G Sbjct: 163 PYDWTRVLIEKLAVPLKATALRISIVGHTSSTETARGDRDVFELSVLRADAVRRILKQQG 222 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + ++ ++G + DP +ANRR+ I + Sbjct: 223 LPTSQLFVVAGKGDREPLFSDDPTMAANRRVTIALM 258 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 33/97 (34%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 KK + + + W + +AD M ++++FF++M + D + Sbjct: 6 KKPKKFPEQDSKIQVWFVTFADLMGLMVSFFVMMLAFSTQDVRKLQIFAGSMRDAFGEQF 65 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 N + + D + EH ++ K Sbjct: 66 VVRHPGKLPSNAVQPLDRTIDDSAAIEHGQDAAIATK 102 >gi|220934640|ref|YP_002513539.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995950|gb|ACL72552.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 227 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 8/112 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRA 292 +F +S+ P+ L ++ LA I + GHTD + A N LS RA Sbjct: 114 ALFAINSAAISPQGRAELDQLVSDLARLDNVQNIHVVGHTDNT---GAADYNMDLSKRRA 170 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 S L++ G+ D + G + ++ + NRR++I + + Sbjct: 171 ESVKAYLVEKGIRAD-LITTEGRGITQPVASNATTEGRAQNRRVEITIRGTE 221 >gi|207723077|ref|YP_002253485.1| chemotaxis motility protein b [Ralstonia solanacearum MolK2] gi|206588269|emb|CAQ18823.1| probable chemotaxis motility protein b [Ralstonia solanacearum MolK2] Length = 171 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 1/129 (0%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274 +L + T G+ I I+DQ+N PMF +S+ P +L+++G L IS+ GHTDA Sbjct: 1 MLIDMTSEGLRIQIVDQQNRPMFANASAEVEPYMRTILRELGSALNDVPNPISLSGHTDA 60 Query: 275 SPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 + + NW LS DRA ++ + L+ G+ ++++++ G +D N NRR Sbjct: 61 TQYATQNGYSNWELSADRANASRRELIAGGMKPEKVARVVGLEASVPLDKTDAFNPINRR 120 Query: 334 IDILVEDRQ 342 I I+V + + Sbjct: 121 ISIVVLNNR 129 >gi|148252339|ref|YP_001236924.1| OmpA domain-containing protein [Bradyrhizobium sp. BTAi1] gi|146404512|gb|ABQ33018.1| putative outer membrane protein with ompA domain [Bradyrhizobium sp. BTAi1] Length = 464 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 84/276 (30%), Gaps = 9/276 (3%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 + L K +E P Q D +V + R Sbjct: 195 EAIAAALAKLPDGFKVASNEVKAPPYIFQAYKDPVAVTVTLSGNVPDENIHAVVVGSSSR 254 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + N + S + + + + + + A Sbjct: 255 KFFSEKVVDNLKNSVGAPANFVNAVVPALGALSRLSTGTLVVSDRDIKISGDALYDAAAG 314 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + + L + + + V + + R F+ S Sbjct: 315 QIRTGLAKDVPQGWQVKADITVKPAAAPVDPTVCQQLFADLLGKARIR--FETGRSDLDR 372 Query: 247 ETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 ++ +L ++ E+ + + I GHTDA A N LS RA + L+K+G+ Sbjct: 373 DSTGLLDRLVEIAMRCPAANVEIAGHTDAE---GDAAANQALSEKRAQAVVDYLVKAGLP 429 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 +R + + G+ + ++D + NRRI+ LV Sbjct: 430 AERFTAV-GYGSAQPVASNDTGDGRAQNRRIEFLVR 464 >gi|71736714|ref|YP_274287.1| OprF [Pseudomonas syringae pv. phaseolicola 1448A] gi|257486264|ref|ZP_05640305.1| OprF [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627226|ref|ZP_06460180.1| OprF [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650179|ref|ZP_06481522.1| OprF [Pseudomonas syringae pv. aesculi str. 2250] gi|298486585|ref|ZP_07004644.1| outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71557267|gb|AAZ36478.1| OprF [Pseudomonas syringae pv. phaseolicola 1448A] gi|298158911|gb|EFH99972.1| outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320324974|gb|EFW81046.1| OprF [Pseudomonas syringae pv. glycinea str. B076] gi|320329128|gb|EFW85126.1| OprF [Pseudomonas syringae pv. glycinea str. race 4] gi|330867622|gb|EGH02331.1| OprF [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330881064|gb|EGH15213.1| OprF [Pseudomonas syringae pv. glycinea str. race 4] gi|330888250|gb|EGH20911.1| OprF [Pseudomonas syringae pv. mori str. 301020] gi|330988403|gb|EGH86506.1| OprF [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010567|gb|EGH90623.1| OprF [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 344 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 8/197 (4%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 R + + + E + + SK+ A + + + Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V + + ++ FD S+ P + ++ + + + + + Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTT 268 Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 + GHTD+ N +LS RA + QVL+ GV R++ + G+ R + Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESRPVADNA 324 Query: 326 PMNSA--NRRIDILVED 340 NRR++ VE Sbjct: 325 TEAGRAVNRRVEAEVEA 341 >gi|26987858|ref|NP_743283.1| OmpA/MotB domain protein [Pseudomonas putida KT2440] gi|24982561|gb|AAN66747.1|AE016303_2 OmpA family protein [Pseudomonas putida KT2440] Length = 264 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 7/116 (6%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDN 284 + +D MF S+ P LQ + E L + + + GHTD+ N Sbjct: 152 VITLDDNGAVMFAFDSAELTPAAQQRLQGLVEKLNSPTVAKVRVIGHTDSV---GSDSYN 208 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 LS RA S + L+ G+ +++ G ++ + NRR+++ + Sbjct: 209 QALSERRASSVAEYLIGQGLEMGKVTS-QGRGESEPVTDNETEEGRARNRRVELHL 263 >gi|34763480|ref|ZP_00144424.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886853|gb|EAA23981.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 157 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 5/132 (3%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 K V + ++I+ + FD S P+ +L+ I E + + I+I GHT Sbjct: 14 KNVDILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQNNYEITIVGHT 73 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330 D+ N++LS RA S L++ G+SEDRI I + + + Sbjct: 74 DSI---GSNAYNFKLSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQ 130 Query: 331 NRRIDILVEDRQ 342 NRR++ + R+ Sbjct: 131 NRRVEFKLVQRE 142 >gi|313203887|ref|YP_004042544.1| ompa/motb domain protein [Paludibacter propionicigenes WB4] gi|312443203|gb|ADQ79559.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4] Length = 506 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 84/311 (27%), Gaps = 28/311 (9%) Query: 50 VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 +++ + D + + + P + D T Sbjct: 200 LIFSFGSPKDADGDGVSDKLD--KCPNTPKGVEVDAFGCPIDTDGDGVADYLDKCPNTPA 257 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD--LEKSI 167 + + + + N+ + + G + S D Sbjct: 258 GAAVDANGCPLDSDGDGVPDYLDKCPNTPKGIKVDAAGCPLDSDGDGVPDSLDKCPNTPK 317 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + N PL + + D K + SG D GV + + Sbjct: 318 GVKVNASGCPLDSDGDGVPDNIDKCPDTPKGVKVDTSGCPIDTDGDGVPDYLDKCPTVPG 377 Query: 228 IIDQRNTP-----------------MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269 I + P F+ + + +L K+ +V+ + I Sbjct: 378 IAANKGCPEVKAETKKIFAQALQGIQFESGKDVIKKSSFAILNKVVKVMNDNPSYNLEIN 437 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 GHTD A N LS RA + L K+GV ++ GF + Sbjct: 438 GHTDNQ---GAAAMNLTLSQKRADAVKAYLTKNGVDAGKL-AAKGFGQTVPVADNATAAG 493 Query: 328 NSANRRIDILV 338 + NRR++ V Sbjct: 494 RAKNRRVEFKV 504 >gi|16078432|ref|NP_389251.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis str. 168] gi|221309232|ref|ZP_03591079.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis str. 168] gi|221313560|ref|ZP_03595365.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318482|ref|ZP_03599776.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis str. JH642] gi|221322755|ref|ZP_03604049.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis str. SMY] gi|321315123|ref|YP_004207410.1| flagellar motor protein MotB [Bacillus subtilis BSn5] gi|127250|sp|P28612|MOTB_BACSU RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein MotB gi|143208|gb|AAA22603.1| motility protein B [Bacillus subtilis] gi|2633739|emb|CAB13241.1| motility protein B; MotB component of the stator flagellum complex [Bacillus subtilis subsp. subtilis str. 168] gi|320021397|gb|ADV96383.1| flagellar motor protein MotB [Bacillus subtilis BSn5] Length = 261 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 7/198 (3%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 T + + +S +E ++ ++ ++L S + Sbjct: 59 TGGTGVLDYSSVTPPENESDGIDEVKKEKEEKEKNKKEKEKAADQEELENVKSQVEKFIK 118 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVI 266 + + + T G+LI+I D FD + E + + ++I +L + I Sbjct: 119 DKKLEHQLETKMTSEGLLITIKDS---IFFDSGKATIRKEDVPLAKEISNLLVINPPRNI 175 Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 I GHTD P +N NW LS+ RA + +L+++ + ++ G+ ++ ++ Sbjct: 176 IISGHTDNMPIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGYGEYKPVASNK 235 Query: 326 PMNSA--NRRIDILVEDR 341 NRR+++L+ R Sbjct: 236 TAEGRSKNRRVEVLILPR 253 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 4/166 (2%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +KK + + SW + YAD +T+L+A F+V++ ++ D + + + FN Sbjct: 1 MARKKKKKHEDEHVDESWLVPYADILTLLLALFIVLYASSSIDAAKFQMLSKSFNEVF-- 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 T G+ D + +++ + + + + K ++ + Sbjct: 59 --TGGTGVLDYSSVTPPENESDGIDEVKKEKEEKEKNKKEKEKAADQEELENVKSQVEKF 116 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + SE K + S PL+KE Sbjct: 117 IKDKKLEHQLETKMTSEGLLITIKDSIFFDSGKATIRKEDVPLAKE 162 >gi|297529303|ref|YP_003670578.1| OmpA/MotB domain protein [Geobacillus sp. C56-T3] gi|297252555|gb|ADI26001.1| OmpA/MotB domain protein [Geobacillus sp. C56-T3] Length = 268 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 7/155 (4%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 ++L + + S + ++ + T G+ I+I+D +FD S+ + Sbjct: 106 EKEELKQIQAKIDSYIHQKHLTGKLQTSLTDEGLAITILDD---ILFDSGSAEVRMKDRR 162 Query: 251 VLQKIGEVL-AHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + +I +L + I I GHTD P N NW LS+ RA + +VL+++ + R Sbjct: 163 LAAEISALLVMNPPRNIMISGHTDNVPIHNEKFASNWELSVMRAVNFMKVLLENKQLDPR 222 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 G+ ++ ++ NRR++IL+ R Sbjct: 223 YFSAKGYGEYKPIASNATAAGRMKNRRVEILILPR 257 >gi|254475762|ref|ZP_05089148.1| OmpA/MotB [Ruegeria sp. R11] gi|214030005|gb|EEB70840.1| OmpA/MotB [Ruegeria sp. R11] Length = 219 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 10/209 (4%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + + ++ + + + + A+ Sbjct: 14 AAALGLTACTDPATIGTNGSNTQQGAIIGGIIGAGVGALTNDSDRGLGAATGAIVGAAAG 73 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + ++ + L G+ T +++S+ + F SS P L Sbjct: 74 SVIGNQLDAQERELRQSISNDGITIVNTGDRLIVSLPNDLT---FATDSSAISPAVRSDL 130 Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 K+ L + + GHTD+ A N LS RA + + GV +R+ Sbjct: 131 NKVAASLVRYPNSLVQVIGHTDSD---GSASYNQALSERRANAVADQIQAGGVPYNRL-A 186 Query: 312 ISGFAHHRLKIASDPMN--SANRRIDILV 338 I G + ++ + NRR++I+V Sbjct: 187 IIGRGEDQPVASNLTPEGKARNRRVEIVV 215 >gi|238024505|ref|YP_002908737.1| outer membrane protein [Burkholderia glumae BGR1] gi|237879170|gb|ACR31502.1| Outer membrane protein [Burkholderia glumae BGR1] Length = 602 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 31/280 (11%), Positives = 80/280 (28%), Gaps = 24/280 (8%) Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + + D+ + + + + ++S Sbjct: 316 GPANAVGMSVDRGTGNPWQRDVEMQTRVEPADAEASALPWPFPQPLLAAMPRRLWVSPRM 375 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + +L + + + E +N+ + ++ L+ L Sbjct: 376 TAFAHALALAACAAAVAFWASAKNNEALLNRIGADLGRYSTVPPAHDAAKRDALEALIAD 435 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQ----------------RNTPMFDKSSS 242 ++ ++ ++ D + +FD S Sbjct: 436 RDQLDRYARTGVPLRLSFGMYRGARLMPALNDAIASYVPPPPPPAVVTLDSMSLFDSGRS 495 Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 P + + E++ + + G+TD N +LS RA + L++ Sbjct: 496 QLKPGSTRAMVGALEMIKAHPDKRILVAGYTDN---SGNPNRNLKLSTARARAVRDWLIE 552 Query: 302 S-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + G+ + I G+ R ++D + NRR++I + Sbjct: 553 ASGIPTTQF-AIQGYGDTRPIASNDTPEGRARNRRVEITL 591 >gi|167002401|ref|ZP_02268191.1| ompA family protein [Burkholderia mallei PRL-20] gi|243061889|gb|EES44075.1| ompA family protein [Burkholderia mallei PRL-20] Length = 438 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + V +I + R +F S+ + + VL ++ + L Sbjct: 286 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 342 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G+TD +P NW LS +RA + ++ +RI+ G Sbjct: 343 QVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 401 Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343 +D + NRR++I + G Sbjct: 402 PVAPNDSPANRARNRRVEITLMLAPG 427 >gi|89093920|ref|ZP_01166865.1| OmpA/MotB [Oceanospirillum sp. MED92] gi|89081806|gb|EAR61033.1| OmpA/MotB [Oceanospirillum sp. MED92] Length = 265 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 88/225 (39%), Gaps = 12/225 (5%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 ++++ ++ + + L ++ ++ + + + + Sbjct: 43 DRFEKAMRSLNDAFQGEDGANSVIELPHEAPVKTEVPEEIEEVLPATNIADAEGEKPQEN 102 Query: 182 KI--LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + ++ + L +A ++S L + ++ + ++IS+ + +FD Sbjct: 103 EAEFQDIELQTELNRMADEVSQELQAAINSDMAEIGT--PKDGKLVISL---KGDVVFDP 157 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297 S+ E + I ++ + + I GHTD P + NW LS RA + + Sbjct: 158 GSAEFHAEMMTTFDSIVLLMKKNPDYKLRINGHTDNIPIQTTRFPSNWDLSAIRATNVLR 217 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 +++ G+ +R++ +G+ ++ + NRR++ ++E Sbjct: 218 YMVRGGIDLERVTA-TGYGESVPLESNRTLEGRAKNRRLEFVLEK 261 >gi|172058884|ref|YP_001815344.1| OmpA/MotB domain-containing protein [Exiguobacterium sibiricum 255-15] gi|171991405|gb|ACB62327.1| OmpA/MotB domain protein [Exiguobacterium sibiricum 255-15] Length = 257 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 9/173 (5%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + K + + +L K + + K + E T G++ +I D+ Sbjct: 71 SQEEEDSKKTDARTKAQSYEIAELEKIKEEANDYIKQQKLEKDIKVEVTNEGLVFNIRDR 130 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIAR-DNWRLSL 289 +F + + + I + Q + +L I + GHTD P + NW LS Sbjct: 131 ---ALFSPAQADVKGDAIQIAQGMSNLLVKAGQRQIQVSGHTDNIPINTVQYPSNWELSA 187 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 +RA S + L ++ ++ R +SG+ ++ ++D S NRR+++L+ Sbjct: 188 ERAISFMRALQRNPKLTPKRF-TVSGYGEYQPIASNDTESGRSQNRRVEVLIR 239 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 43/115 (37%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ + W I YAD +T+L+A F+V++ + D KA+ Q F+ Sbjct: 2 KRKKKPHDEHISEGWLIPYADLLTLLLALFIVLFASSNVDAVKLKAMSQSFSSVFNGGSG 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 + E S+ + + ++ N + Q+LE +I Sbjct: 62 MITNSSLSTSQEEEDSKKTDARTKAQSYEIAELEKIKEEANDYIKQQKLEKDIKV 116 >gi|326319300|ref|YP_004236972.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376136|gb|ADX48405.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 296 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 73/196 (37%), Gaps = 11/196 (5%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 K + + ++ + + + + + + + + + Sbjct: 104 DADIKKAGADAERLRLTSEADRARMQAEANARSAQQAQLQAASAEQRAADNAARVRALEA 163 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269 ++ + + T G+L+++ D +F + + + L K+ L + I Sbjct: 164 QLRDIEAQQTERGLLVTLGD----VLFAFNKAELSAQAGPRLDKLANFLRQFPDRKLIIE 219 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327 GHTD+ N LS RA + L++ GV+ DRI+ G+ + Sbjct: 220 GHTDSV---GGDAYNQSLSERRAQAVQSALVQRGVAPDRITA-RGYGKTYPVADNSSPEG 275 Query: 328 NSANRRIDILVEDRQG 343 + NRR++I++ D +G Sbjct: 276 RAMNRRVEIVIADDKG 291 >gi|83944251|ref|ZP_00956706.1| OmpA family protein [Sulfitobacter sp. EE-36] gi|83953292|ref|ZP_00962014.1| OmpA family protein [Sulfitobacter sp. NAS-14.1] gi|83842260|gb|EAP81428.1| OmpA family protein [Sulfitobacter sp. NAS-14.1] gi|83844795|gb|EAP82677.1| OmpA family protein [Sulfitobacter sp. EE-36] Length = 222 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 10/139 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + V+ T +++++ +F S+ L + + + Sbjct: 87 EADLRRQLDSDVIITNTGDRLIVTLPQD---ILFATDSTQVQAGMQNDLAALARNVNVYS 143 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I GHTD+ A N +LS RA + VL+ +GV RI + G + Sbjct: 144 NSTLQIVGHTDSD---GEASYNQQLSEGRARAVANVLVSNGVPGSRIQSV-GRGESQPVA 199 Query: 323 A--SDPMNSANRRIDILVE 339 + + + NRR++I++ Sbjct: 200 SNLNAAGKAQNRRVEIVIL 218 >gi|299137972|ref|ZP_07031152.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8] gi|298599902|gb|EFI56060.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8] Length = 513 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 93/270 (34%), Gaps = 12/270 (4%) Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + A K D QN + +H + QK + R+ + S Sbjct: 242 MNHADKYAPDIMQDVATDLQNADTMDSSKHRDQKMEITYAREAVQKAEDARISSLRKQAS 301 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 QQ E + + + ++ A + + Sbjct: 302 ERQQQERADKEQAQADAAQSQIAAANANAQAEAAAAAKARAEADAANARAQAAESQHNAQ 361 Query: 196 AKKISS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + + + + + + G+++++ D +FD + P+T V L K Sbjct: 362 KSEADASAVREKLRAQLNSVLATSESARGLIVNMSD----VLFDTAKFTLKPDTKVSLAK 417 Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + + G+TD+ N +LS +RA + + L+++GV ++ Sbjct: 418 VATILQLYPGLKVQVEGYTDSV---GGDEYNQKLSENRANAVHDFLVQNGVPAANVTAA- 473 Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341 G+ ++ + + NRR++++V Sbjct: 474 GYGKNKPVADNGTAAGRAQNRRVNLVVSGD 503 >gi|167035288|ref|YP_001670519.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1] gi|166861776|gb|ABZ00184.1| OmpA/MotB domain protein [Pseudomonas putida GB-1] Length = 230 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ S+ L I L + +S+ GHTD+ N +LS RA+S Sbjct: 126 FEFDSARLTSSDKERLNTIATRLKQEAPSARLSVSGHTDSV---GSDSYNQKLSERRAHS 182 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L++SGV + G + + NRR +I ++ Sbjct: 183 VTDYLVESGVPRRSFVSVVGAGETQPVADNATAEGRAMNRRTEIKIQR 230 >gi|290475121|ref|YP_003468005.1| hypothetical protein XBJ1_2106 [Xenorhabdus bovienii SS-2004] gi|289174438|emb|CBJ81232.1| Conserved hypothetical protein with OmpA/MotB domains (probable component of SST VI cluster) [Xenorhabdus bovienii SS-2004] Length = 403 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 4/116 (3%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNW 285 SI+ R +F+ S+ + V++ I E + + I + G+TD P + N+ Sbjct: 281 SIVTLRGDGLFNTGSTQIKNNELPVIKHIAETINNIKGEILVIGYTDDVPINSSGFSSNY 340 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 LSL RA S + K +R+ + G +D + NRR++I++ Sbjct: 341 ALSLARAKSVKREFEKYLDHPERV-RTEGRGESDPLFPNDTPSHRAKNRRVEIVLL 395 >gi|227536011|ref|ZP_03966060.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227244124|gb|EEI94139.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 460 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 92/260 (35%), Gaps = 7/260 (2%) Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + + S ++L + T +++ G + K ++ + + + S+ Sbjct: 204 GAFVPVGVGVKFKLSEVVALNLGYTMNFTDDNLLYGPGRVDYKGKFSNVYGGLEFTLGSR 263 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 ++ + + + S E K+ L + K Sbjct: 264 DKQNLTFANPVATLYDELKDPSLKNEVEALKQRVSTLEGTVDQLGKDSDGDGVSDKFDKC 323 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 ++ +G V D + F + + Q + F+ SS+ E+ L ++ + Sbjct: 324 PNTP-AGTVVDGSGCPIKFPEPVVNNITASTGQYGSIQFEFDSSVLKTESYSTLDRLAKE 382 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 L + +++ G+ A N LS DRA + Q L+ +GV+ +++ +G+ Sbjct: 383 LRDNNSSVTLDGYASAE---GTEAYNMTLSKDRANAVKQYLVNAGVTAAKVTA-NGYGEA 438 Query: 319 RLKIASDPMNSA--NRRIDI 336 ++ NRR++I Sbjct: 439 NPVASNATEEGRIQNRRVEI 458 >gi|157736742|ref|YP_001489425.1| outer membrane fibronectin-binding protein [Arcobacter butzleri RM4018] gi|157698596|gb|ABV66756.1| outer membrane fibronectin-binding protein [Arcobacter butzleri RM4018] Length = 338 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ + + +V+ +I HTD+ N +LS RA SA Sbjct: 236 FDTDKSVIKDSYNSRINEFAKVMKADPKLKANIEAHTDSV---GTDAYNQKLSERRATSA 292 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 L+ +GV +DRI + G+ R ++D + NRR++ Sbjct: 293 VNALVAAGVEKDRIKAV-GYGESRPIASNDTVEGRAENRRVE 333 >gi|53716349|ref|YP_105194.1| hypothetical protein BMAA0398 [Burkholderia mallei ATCC 23344] gi|53723119|ref|YP_112104.1| hypothetical protein BPSS2105 [Burkholderia pseudomallei K96243] gi|67642591|ref|ZP_00441345.1| OmpA family protein [Burkholderia mallei GB8 horse 4] gi|121596826|ref|YP_991186.1| hypothetical protein BMASAVP1_1592 [Burkholderia mallei SAVP1] gi|124382978|ref|YP_001025575.1| hypothetical protein BMA10229_1777 [Burkholderia mallei NCTC 10229] gi|126443591|ref|YP_001063957.1| hypothetical protein BURPS668_A2966 [Burkholderia pseudomallei 668] gi|126447095|ref|YP_001077649.1| hypothetical protein BMA10247_A0447 [Burkholderia mallei NCTC 10247] gi|126458045|ref|YP_001076870.1| hypothetical protein BURPS1106A_A2841 [Burkholderia pseudomallei 1106a] gi|167821238|ref|ZP_02452918.1| hypothetical protein Bpse9_39318 [Burkholderia pseudomallei 91] gi|167829581|ref|ZP_02461052.1| hypothetical protein Bpseu9_38230 [Burkholderia pseudomallei 9] gi|167908000|ref|ZP_02495205.1| hypothetical protein BpseN_37601 [Burkholderia pseudomallei NCTC 13177] gi|226193911|ref|ZP_03789512.1| ompA family protein [Burkholderia pseudomallei Pakistan 9] gi|237508208|ref|ZP_04520923.1| OmpA-family protein [Burkholderia pseudomallei MSHR346] gi|242312724|ref|ZP_04811741.1| ompA family protein [Burkholderia pseudomallei 1106b] gi|254177324|ref|ZP_04883980.1| ompA family protein [Burkholderia mallei ATCC 10399] gi|254184501|ref|ZP_04891090.1| ompA family protein [Burkholderia pseudomallei 1655] gi|254194178|ref|ZP_04900610.1| ompA family protein [Burkholderia pseudomallei S13] gi|254203138|ref|ZP_04909500.1| ompA family protein [Burkholderia mallei FMH] gi|254208472|ref|ZP_04914821.1| ompA family protein [Burkholderia mallei JHU] gi|254300798|ref|ZP_04968242.1| ompA family protein [Burkholderia pseudomallei 406e] gi|254359345|ref|ZP_04975617.1| ompA family protein [Burkholderia mallei 2002721280] gi|52213533|emb|CAH39585.1| putative outer membrane porin protein [Burkholderia pseudomallei K96243] gi|52422319|gb|AAU45889.1| ompA family protein [Burkholderia mallei ATCC 23344] gi|121224624|gb|ABM48155.1| ompA family protein [Burkholderia mallei SAVP1] gi|126223082|gb|ABN86587.1| ompA family protein [Burkholderia pseudomallei 668] gi|126231813|gb|ABN95226.1| ompA family protein [Burkholderia pseudomallei 1106a] gi|126239949|gb|ABO03061.1| ompA family protein [Burkholderia mallei NCTC 10247] gi|147746183|gb|EDK53261.1| ompA family protein [Burkholderia mallei FMH] gi|147751159|gb|EDK58227.1| ompA family protein [Burkholderia mallei JHU] gi|148028532|gb|EDK86492.1| ompA family protein [Burkholderia mallei 2002721280] gi|157810991|gb|EDO88161.1| ompA family protein [Burkholderia pseudomallei 406e] gi|160698364|gb|EDP88334.1| ompA family protein [Burkholderia mallei ATCC 10399] gi|169650929|gb|EDS83622.1| ompA family protein [Burkholderia pseudomallei S13] gi|184215093|gb|EDU12074.1| ompA family protein [Burkholderia pseudomallei 1655] gi|225933856|gb|EEH29842.1| ompA family protein [Burkholderia pseudomallei Pakistan 9] gi|235000413|gb|EEP49837.1| OmpA-family protein [Burkholderia pseudomallei MSHR346] gi|238523774|gb|EEP87210.1| OmpA family protein [Burkholderia mallei GB8 horse 4] gi|242135963|gb|EES22366.1| ompA family protein [Burkholderia pseudomallei 1106b] gi|261827068|gb|ABM98527.2| ompA family protein [Burkholderia mallei NCTC 10229] Length = 438 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + V +I + R +F S+ + + VL ++ + L Sbjct: 286 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 342 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G+TD +P NW LS +RA + ++ +RI+ G Sbjct: 343 QVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 401 Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343 +D + NRR++I + G Sbjct: 402 PVAPNDSPANRARNRRVEITLMLAPG 427 >gi|332284746|ref|YP_004416657.1| outer membrane protein A precursor [Pusillimonas sp. T7-7] gi|330428699|gb|AEC20033.1| outer membrane protein A precursor [Pusillimonas sp. T7-7] Length = 192 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE VL ++ I GHTD+ + N LS RA S Sbjct: 86 FFDFDKSTLKPEGRQVLDQVASQADTINLETLIATGHTDSI---GTEQYNQGLSQRRANS 142 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+ GV+ DRI + G ++ + NRR++I + + Sbjct: 143 VKDYLVSKGVAADRIY-VEGKGETSPVASNSTREGRAQNRRVEIEIVGTR 191 >gi|153009315|ref|YP_001370530.1| OmpA/MotB domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151561203|gb|ABS14701.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188] Length = 221 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A GV I++++ FD + L + Sbjct: 77 NYMDRQENELRAQLQGTGVSVTRNGDQIILNMPSSIT---FDTDQDQVKSQFYPTLNSVA 133 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + + + GHTD++ N LS RA S L G+ R + G+ Sbjct: 134 IVLRKFNQTLVDVYGHTDST---GSVSHNQALSQRRAASVASYLGSQGIDPRRF-AVIGY 189 Query: 316 AHHRLKIASDP--MNSANRRIDILV 338 + + + NRR++I + Sbjct: 190 GASQPVATNATPEGRAQNRRVEIQI 214 >gi|66045337|ref|YP_235178.1| thrombospondin type 3 repeat-containing OmpA/MotB protein [Pseudomonas syringae pv. syringae B728a] gi|63256044|gb|AAY37140.1| Thrombospondin type 3 repeat:OmpA/MotB:OmpF [Pseudomonas syringae pv. syringae B728a] gi|330973748|gb|EGH73814.1| thrombospondin type 3 repeat-containing OmpA/MotB protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 344 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 8/197 (4%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 R + + + E + + SK+ A + + + Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V + + ++ FD S+ P + ++ + + + + + Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPSSYGDIKNLADFMQQYPQTTT 268 Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 + GHTD+ N +LS RA + QVL+ GV R++ + G+ + + Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGETKPVADNA 324 Query: 326 PMNSA--NRRIDILVED 340 NRR++ VE Sbjct: 325 TEAGRAVNRRVEAEVEA 341 >gi|291483903|dbj|BAI84978.1| flagellar motor protein MotB [Bacillus subtilis subsp. natto BEST195] Length = 260 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 7/198 (3%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 T + + +S +E ++ ++ ++L S + Sbjct: 58 TGGTGVLDYSSVTPPENESDGIDEVKKEKEEKEKNKKEKEKAADQEELENVKSQVEKFIK 117 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVI 266 + + + T G+LI+I D FD + E + + ++I +L + I Sbjct: 118 DKKLEHQLETKMTSEGLLITIKDS---IFFDSGKATIRKEDVPLAKEISNLLVINPPRNI 174 Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 I GHTD P +N NW LS+ RA + +L+++ + ++ G+ ++ ++ Sbjct: 175 IISGHTDNMPIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGYGEYKPVASNK 234 Query: 326 PMNSA--NRRIDILVEDR 341 NRR+++L+ R Sbjct: 235 TAEGRSKNRRVEVLILPR 252 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 56/163 (34%), Gaps = 4/163 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K + SW + YAD +T+L+A F+V++ ++ D + + + FN T Sbjct: 3 RKKKKHEDEQVDESWLVPYADILTLLLALFIVLYASSSIDAAKFQMLSKSFNEVF----T 58 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 G+ D + +++ + + + + K ++ + Sbjct: 59 GGTGVLDYSSVTPPENESDGIDEVKKEKEEKEKNKKEKEKAADQEELENVKSQVEKFIKD 118 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + SE K + S PL+KE Sbjct: 119 KKLEHQLETKMTSEGLLITIKDSIFFDSGKATIRKEDVPLAKE 161 >gi|83952523|ref|ZP_00961254.1| OmpA domain protein [Roseovarius nubinhibens ISM] gi|83836196|gb|EAP75494.1| OmpA domain protein [Roseovarius nubinhibens ISM] Length = 203 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 57/202 (28%), Gaps = 10/202 (4%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + D I + + Sbjct: 6 AEPAHLQGNDPNARAKQGALIGGVVGAITGAAASDKKGKGAVIGGAIGALGGAAIGNALD 65 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + L D V T +++++ +F SS L + L Sbjct: 66 KQAAELERDLNNDSVTVNNTGDRLIVTMPQD---ILFAIDSSTVNSGLRGDLLTVARSLQ 122 Query: 261 HSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + GHTD + A N LS RA + VLM GV+ RI G + Sbjct: 123 SYPDTTVQVVGHTDNT---GSAAHNQALSERRANAVADVLMNGGVAFSRIQTY-GRGEDQ 178 Query: 320 LKIASDPM--NSANRRIDILVE 339 ++ + NRR++I++ Sbjct: 179 PLASNLTAEGRAQNRRVEIVIL 200 >gi|229588852|ref|YP_002870971.1| hypothetical protein PFLU1321 [Pseudomonas fluorescens SBW25] gi|229360718|emb|CAY47576.1| putative outer membrane protein [Pseudomonas fluorescens SBW25] Length = 231 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S+ L + L + + + GHTD+ N RLS RA+S Sbjct: 127 FQFDSAQLTAADKTKLDTVATRLKQEAPSAQLRVSGHTDSV---GKDAYNQRLSEKRAHS 183 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L+ +GV ++G + NRR +I + Sbjct: 184 VTDYLIGAGVPRSNFVSVTGAGESHPVADNKTAEGRALNRRTEIQINR 231 >gi|296113910|ref|YP_003627848.1| outer membrane protein CD [Moraxella catarrhalis RH4] gi|149757|gb|AAA66180.1| outer membrane protein CD [Moraxella catarrhalis] gi|45685720|gb|AAS75593.1| OmpCD [Moraxella catarrhalis O35E] gi|295921604|gb|ADG61955.1| outer membrane protein CD [Moraxella catarrhalis RH4] gi|326560587|gb|EGE10968.1| outer membrane protein CD [Moraxella catarrhalis 103P14B1] gi|326573968|gb|EGE23918.1| outer membrane protein CD [Moraxella catarrhalis O35E] Length = 453 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 82/287 (28%), Gaps = 7/287 (2%) Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 AI+ Y A S +L + N G Sbjct: 156 KVNAIDGYTAEVANGQNIAKDQAVKAGQEVAESKDTIGNLGLGARYLVNDALALRGEARA 215 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + L+ + + + + + + P Sbjct: 216 IHNFDNKWWEGLALAGLEVTLGGRLAPAVPVAPVAEPVAEP-VVAPAPVILPKPEPEPVI 274 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDK 239 E+ A+ + + L + V + L+ + Q FD Sbjct: 275 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNTVVDPRGCPVQVNLVEELRQELRVFFDY 334 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 SI P+ + K+ + +I GH R+ AR N RLS RA + + Sbjct: 335 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 394 Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L G++ +R++ + G+ R + NRR++ ++ + Sbjct: 395 LSNEFGIAPNRLNAV-GYGFDRPIAPNTTAEGKAMNRRVEAVITGSK 440 >gi|326565587|gb|EGE15750.1| outer membrane protein CD [Moraxella catarrhalis 12P80B1] Length = 449 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 82/287 (28%), Gaps = 7/287 (2%) Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 AI+ Y A S +L + N G Sbjct: 152 KVNAIDGYTAEVANGQNIAKDQAVKAGQEVAESKDTIGNLGLGARYLVNDALALRGEARA 211 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + L+ + + + + + + P Sbjct: 212 IHNFDNKWWEGLALAGLEVTLGGRLAPAVPVAPVAEPVAEP-VVAPAPVILPKPEPEPVI 270 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDK 239 E+ A+ + + L + V + L+ + Q FD Sbjct: 271 EEAPAVIEDIVVDSDGDGVPDHLDACPGTPVNTVVDPRGCPVQVNLVEELRQELRVFFDY 330 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 SI P+ + K+ + +I GH R+ AR N RLS RA + + Sbjct: 331 DKSIIKPQYREEVAKVAAQMREFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSM 390 Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L G++ +R++ + G+ R + NRR++ ++ + Sbjct: 391 LSNEFGIAPNRLNAV-GYGFDRPIAPNTTAEGKAMNRRVEAVITGSK 436 >gi|256823578|ref|YP_003147541.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069] gi|256797117|gb|ACV27773.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069] Length = 377 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + PE + + K+ E L I+GHTD+ + N LS RA S Sbjct: 270 FDTNKYEVKPEMVAEIAKVAEFLRQYPSVNAEIQGHTDSV---GSSAYNQGLSERRANSV 326 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L+ + G++ R+S G+ + NRR + Sbjct: 327 KDYLVSNFGINASRLSA-KGYGEEEPIADNSTEEGRALNRRAE 368 >gi|225375333|ref|ZP_03752554.1| hypothetical protein ROSEINA2194_00958 [Roseburia inulinivorans DSM 16841] gi|225212822|gb|EEG95176.1| hypothetical protein ROSEINA2194_00958 [Roseburia inulinivorans DSM 16841] Length = 270 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 78/228 (34%), Gaps = 10/228 (4%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 ST ++++ + ++ + S G + D+ + Sbjct: 38 STVDAEKFEMVIASLQSSFSILPSGGASIGDGEMVSSGVSQLQMYDIYYNQMANTQTTDD 97 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + +++ L + + + I V + +L+++ + Sbjct: 98 TSESSDVAEEYKEEALAESEQMAEQVQDLVAQYGIQDQVEIDFNAEYVLLNLN---GAVL 154 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF--RNIARDNWRLSLDRAY 293 FD S E ++ KIG++L +I I GHTD PF + +N LS+ RA Sbjct: 155 FDSGKSEIKSEAYPLMDKIGKILQSYQQNMIEIEGHTDNIPFTHSSKYENNDVLSMYRAL 214 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + + + I SG + + + NRR++I + Sbjct: 215 YVADYMRNITTIDPSHIKS-SGRGEYVPIADNSTPEGRARNRRVEIKI 261 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 23/206 (11%), Positives = 66/206 (32%), Gaps = 1/206 (0%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + ++ P +W ++D M +L+ FF++++ ++ D + + + L + Sbjct: 3 RKKTEEAPAGAPAWMATFSDLMNLLLCFFVLLFSMSTVDAEKFEMVIASLQSSFSILPSG 62 Query: 80 SKGIFDEQNPPERSSQ-NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 I D + SQ D+ ++ + D S++ ++Y+ Q Sbjct: 63 GASIGDGEMVSSGVSQLQMYDIYYNQMANTQTTDDTSESSDVAEEYKEEALAESEQMAEQ 122 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + +D + + L + + + E M + ++ ++ Sbjct: 123 VQDLVAQYGIQDQVEIDFNAEYVLLNLNGAVLFDSGKSEIKSEAYPLMDKIGKILQSYQQ 182 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGI 224 + G + + Sbjct: 183 NMIEIEGHTDNIPFTHSSKYENNDVL 208 >gi|120553263|ref|YP_957614.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8] gi|120323112|gb|ABM17427.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8] Length = 348 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 126/351 (35%), Gaps = 28/351 (7%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVM-WIINATDDDTKKAIEQYFNPFGK 74 +I + T N + + +++ F+++ +++ + Sbjct: 1 MIGSRRRSQSTTNVWPGYVDALS--ALLMLVIFMLLVYVVCQLYLSQTLSDRDNQLARLS 58 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + + + + +N+I D++ T + ++ + + Q + Sbjct: 59 AQLNELPELLGLEQSKTEALENQIVRLQDDYSTSLKRNDQLIEQLESNREQLMRQTASVE 118 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKS----TDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + ++Q + ++ + ++ S+ ++ L ++ + ++++ Sbjct: 119 AQAEQLARMEEAVGEKDQISASQQAMILQLSNQIVSLREQLRQIASALELQQQMTDEKEQ 178 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL-----ISIIDQR----NTPMFDKSS 241 L+ +++++++ L+ V F IL + I+ R + +F +S Sbjct: 179 ELEQVSRRLNTLLAERVNQLQQYQSEFFARLRDILAGNENVRIVGDRFLLPSELLFASAS 238 Query: 242 SIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASPFRN-IARDNWRLSLDRA 292 + E L K+ ++L ++ I GHTD P NW LS RA Sbjct: 239 AELGEEGRQELDKLADLLLDVSSRIPDDVDWILRIDGHTDMLPINTQRFPSNWELSTARA 298 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 + + L GV E R+ +GF + NRRI++ + DR Sbjct: 299 VAVVRYLATEGVPERRM-AAAGFGEFFPVADGTSPEALQRNRRIELKLTDR 348 >gi|163786823|ref|ZP_02181271.1| peptidoglycan-associated lipoprotein [Flavobacteriales bacterium ALC-1] gi|159878683|gb|EDP72739.1| peptidoglycan-associated lipoprotein [Flavobacteriales bacterium ALC-1] Length = 367 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 7/147 (4%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I + V +K + + I ++ + +FD S L + L ++ + Sbjct: 225 YIDNVSIESVEKKEMKPIKEKIEEPEIKVNEVYTFKNVLFDFDKSELLDVSKGELNQLYK 284 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + + + I GHTD + N LS RA + L+ G+ RI + GF Sbjct: 285 HLKENKDLKVKIFGHTDNV---GLEARNKELSKQRAKAVVDYLISQGLDVSRI-QFIGFG 340 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDR 341 + +D NRR++ + D Sbjct: 341 SSKPISDNDTDEGRQLNRRVEFKLTDS 367 >gi|28869391|ref|NP_792010.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213968194|ref|ZP_03396339.1| ompA family protein [Pseudomonas syringae pv. tomato T1] gi|301383801|ref|ZP_07232219.1| ompA family protein [Pseudomonas syringae pv. tomato Max13] gi|302060757|ref|ZP_07252298.1| ompA family protein [Pseudomonas syringae pv. tomato K40] gi|302131856|ref|ZP_07257846.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852632|gb|AAO55705.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213927174|gb|EEB60724.1| ompA family protein [Pseudomonas syringae pv. tomato T1] gi|331018607|gb|EGH98663.1| ompA family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 271 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 99/248 (39%), Gaps = 12/248 (4%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 + + + S D + + ++ I + ++E + L ++ Sbjct: 26 QDSAQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVSHYAYL 85 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218 S+ + + N L K+ +++ +L K++S ++ + + Sbjct: 86 SSRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATT 145 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 146 QTDRGLVMTLGD----VLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 DN LS DRA + VLM GV + RI ++ G+ A+ + NRR++ Sbjct: 200 -GDREDNLTLSKDRAQAVADVLMDLGVDDKRI-QVEGYGQQFPVDANASERGRAQNRRVE 257 Query: 336 ILVEDRQG 343 I+ D +G Sbjct: 258 IVFSDEKG 265 >gi|167916344|ref|ZP_02503435.1| hypothetical protein Bpse112_38087 [Burkholderia pseudomallei 112] Length = 421 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + V +I + R +F S+ + + VL ++ + L Sbjct: 269 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 325 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G+TD +P NW LS +RA + ++ +RI+ G Sbjct: 326 QVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 384 Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343 +D + NRR++I + G Sbjct: 385 PVAPNDSPANRARNRRVEITLMLAPG 410 >gi|4928701|gb|AAD33691.1|AF136403_3 RpmB [Pseudomonas aeruginosa] Length = 146 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 1/111 (0%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 +N+Q II+K+ ++ GSWKI +ADF T +MAFFLV+W++++ + KKAI YF Sbjct: 2 DNNQPIIVKRVKRYA-AGHHGGSWKIAFADFATAMMAFFLVLWLLSSATPEQKKAISGYF 60 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +AS + D P + ++ + N + +Q Sbjct: 61 QDPIGFSESASPYVIDLGGTPTPAPDKTLNPQVQAQPDSNESRISPEQDHQ 111 >gi|332668433|ref|YP_004451221.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332337247|gb|AEE54348.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 501 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 36/280 (12%), Positives = 73/280 (26%), Gaps = 16/280 (5%) Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 K+ G P+ + I+ + ++ Sbjct: 226 KDACPTEAGTAATNGCPDTDNDGIINSKDQCPTEAGTAANNGCPDTDNDGIINSKDQCPT 285 Query: 134 LSNSQQSEHCKNSLTRDSE--KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + C D C + S + ++ + K Sbjct: 286 EAGPASNNGCPIRDADGDGVIDANDECPNAAGPASTKGCPDRDSDGIADKNDACPDVKGS 345 Query: 192 LQ-------DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 L D I S ++ F+ S++ Sbjct: 346 LANRGCPDTDGDGIIDSADKCPNQPGPASNNGCPEIAQKDRETLTFAARNVQFETGSAVL 405 Query: 245 LPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + +L ++ ++L ++ + GHTD N +LS RA + L+ G Sbjct: 406 KNTSNTILDQVVDILKRYSDYNVRVSGHTDNV---GSDELNLKLSKARAKACTDYLVSKG 462 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + +RI GF R + NRR + + + Sbjct: 463 IPANRIV-FDGFGESRPVANNATPQGRTQNRRTEFELYQK 501 >gi|262039107|ref|ZP_06012440.1| inner membrane lipoprotein YiaD [Leptotrichia goodfellowii F0264] gi|261746896|gb|EEY34402.1| inner membrane lipoprotein YiaD [Leptotrichia goodfellowii F0264] Length = 164 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 7/113 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 FD +SS+ L + +VL + I + GHTD++ N LS++ Sbjct: 56 PENITFDTNSSVIKSRFTGSLNSVADVLKKYPDSNIIVSGHTDST---GNDSINNPLSVN 112 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 RA S L+ +GV RI+ + G+ ++ + NRR++I + + Sbjct: 113 RAASVKSYLVGAGVPSSRITSV-GYGSKEPIASNSTANGRAQNRRVEIKIVAK 164 >gi|146283087|ref|YP_001173240.1| OmpA family protein [Pseudomonas stutzeri A1501] gi|145571292|gb|ABP80398.1| OmpA family protein [Pseudomonas stutzeri A1501] gi|327481439|gb|AEA84749.1| OmpA family protein [Pseudomonas stutzeri DSM 4166] Length = 260 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 11/214 (5%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 L+ + + + D + T + + + L + A + + Sbjct: 45 SKLAALETQDAGNMLDKANKAYLNDADEKTVDQLAYLTKRRIELAEQTIALRSAEEELGK 104 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + + + + + T G L++ D +FD + P + Sbjct: 105 TSAQRAEARLEAREAQIRKLQEDMQAKQTERGTLVTFGD----VLFDYDRAELKPGGMRS 160 Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +QK+ + L + E + G+TD++ A N RLS RA + L+K GV RI Sbjct: 161 VQKLADFLNDNPERKVIVEGYTDST---GSAEYNQRLSERRADAVRMALVKMGVDPQRIV 217 Query: 311 KISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 G+ ++ + NRR+++ + D Sbjct: 218 S-QGYGKEYPVASNSDSAGRAMNRRVEVTISDDN 250 >gi|77457293|ref|YP_346798.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1] gi|77381296|gb|ABA72809.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1] Length = 264 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 73/238 (30%), Gaps = 11/238 (4%) Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 + + + ++ + + D + + + Sbjct: 21 STPPNPNLEQARTNYAGLQANPQASKVAALETKDASDYLDKADKAYLDKEDAAKVDQLAY 80 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + + + A K + + + + T G L++ Sbjct: 81 LTNQRVEVAKQTIALRTAENNLKNAAAQRAQARLDARDQQIKQLQDSLNAKQTDRGTLVT 140 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 D +F + + +V + K+ + L + + + G+TD++ A N Sbjct: 141 FGD----VLFATNKADLKSSGLVNINKLAQFLQENPDRKVIVEGYTDST---GSASYNQS 193 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 LS RA S L+K GV RI + G+ + + NRR+++ + + Sbjct: 194 LSERRATSVQVALIKMGVDPSRIV-VQGYGKEYPVADNGSVSGRAMNRRVEVTISNDN 250 >gi|311697206|gb|ADQ00078.1| secreted protein containing outer membrane protein, OmpA/MotB, C-terminal domain [marine bacterium HP15] Length = 366 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 98/297 (32%), Gaps = 21/297 (7%) Query: 48 FLVMWIINATDDDTKKA--IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH 105 F V+ + + +T+ + F + K P + + D+ +D+ Sbjct: 72 FSVLLQGSYAEPETRTQNLDTELFRGSLGARLHPGKFRLGGWRPFGGAGYSYTDIDVDQG 131 Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 K + + Q+ R + ++ E + + K Sbjct: 132 GGKTEDAIYLEGGFQRMVAPRFMIETGVRARTELEEGYVDGQYFAGIHYLFGREFPAAPK 191 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + P + + DL K + + LV + L + + + Sbjct: 192 PVVAVQPKPEPVVRPPMDTDGDGV--IDDLDKCPDTPMGALVDSDGCPKELTKDIKETLY 249 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDN 284 + FD + P+ + ++ +VL + GHTD++ A N Sbjct: 250 VE---------FDLDKTEVKPQFYPEIGELAKVLKQYPTSTILLEGHTDST---GSASYN 297 Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 +LS RA + +VL+ + RIS +G + ++ + NRR++ +V Sbjct: 298 QQLSKSRADAVMKVLIDRFSIPSTRIST-TGMGESQPIASNATVEGRAQNRRVEAIV 353 >gi|167725111|ref|ZP_02408347.1| hypothetical protein BpseD_39196 [Burkholderia pseudomallei DM98] Length = 407 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + V +I + R +F S+ + + VL ++ + L Sbjct: 255 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 311 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G+TD +P NW LS +RA + ++ +RI+ G Sbjct: 312 QVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 370 Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343 +D + NRR++I + G Sbjct: 371 PVAPNDSPANRARNRRVEITLMLAPG 396 >gi|170722426|ref|YP_001750114.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619] gi|169760429|gb|ACA73745.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 576 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 9/220 (4%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + +S+++Q+ +T D + S D +K ++E + +++ R+ Sbjct: 338 CVALISSARQNTLLIRQVTDDLRRYSTASLSPDSDKVSQRQEALMVLRQDAQRLDHYYRQ 397 Query: 190 KRLQDLAKKI---SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 L + L+A + + + +F+ S+ P Sbjct: 398 GEPWSLGIGLYQGERLRPSLLAAISGYRIPAMPQGVPDKPRTVRLDSLSLFNSGSAQLKP 457 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 E+ L + + + GHTDA+ N RLS RA + + + G Sbjct: 458 ESTKFLVNAFAGIKAQPGWLIVITGHTDAT---GSDEQNLRLSRARAAAVHDWIQHMGDI 514 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 + + G ++D NRR++I + G Sbjct: 515 PNNCFAVQGLGASEPVASNDTEQGRSTNRRVEIRLVPEAG 554 >gi|110636904|ref|YP_677111.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110279585|gb|ABG57771.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC 33406] Length = 620 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 98/305 (32%), Gaps = 31/305 (10%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQN--------------PPERSSQNKIDLSIDEHIT 107 Y +P GK L +SKG + + ++ + D+ Sbjct: 320 FDEDAPYMHPDGKTLYFSSKGHSTMGGYDVFKTTKLANGVWSTPENMGSPVNTAGDDVYF 379 Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 S D KIG + K+ + +I+ + + +L + K T+ +I Sbjct: 380 VLSADGKIGYYSSNKEGGFGKQDIYSIRMPAAENEPELALLKGKILDDQTGKPTEASITI 439 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISST-----LSGLVADNIVKGVLFET 219 + + + L I + +N ++ Sbjct: 440 TDNATKEIVARYRSNSETGEYLLSLPAGKNYGIAIEKEGHLFYSENMTLNNTNGFKEYKQ 499 Query: 220 TRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 T + I + FD + E+ L K+ ++L ++ I I GHTD Sbjct: 500 DITLVTIKTSGKIILRNIFFDSGKATIRLESTAELLKLVDLLKNNPTLRIEIAGHTDNI- 558 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRI 334 N +LS +RA + L +G+S R+ G+ + + D NRR Sbjct: 559 --GDETLNQKLSEERAKNVVTFLTANGISAGRLVA-KGYGSSQPVAPNTTDTGRQQNRRT 615 Query: 335 DILVE 339 +I + Sbjct: 616 EIKIL 620 >gi|254253396|ref|ZP_04946714.1| Outer membrane protein [Burkholderia dolosa AUO158] gi|124896005|gb|EAY69885.1| Outer membrane protein [Burkholderia dolosa AUO158] Length = 317 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 83/269 (30%), Gaps = 14/269 (5%) Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 A+ + ++ + IT + G + L + Sbjct: 52 ATAALPAPNAGAPGTASGTVVRGTAGTITPPPANAVPGQVVVGGKVPDEATKAAVLQKLR 111 Query: 139 QSEHCKNSLT----RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + N + D + + ++ + MK + + Sbjct: 112 DTYGAANVVDQIEVGDVATPPNWSANVQKLLGAQLKQISKGQLKINGTQIEMKGEVHNEA 171 Query: 195 LAKKISSTLSGL--VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 ++I+S ++ I + + G+L + R F+ S+ P+ +L Sbjct: 172 QRQQIASDMANTLNPTYTIKNALRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRQIL 230 Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++ L+ I GHTD N LS RA + L+ G+ +++ Sbjct: 231 DQMAAALSKLQNRTVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITKGIPPQQMTT 287 Query: 312 ISGFAHHRLKIASD--PMNSANRRIDILV 338 +G + +D + NRRI+ V Sbjct: 288 -TGVGPDQPIAPNDMAEGRARNRRIEFRV 315 >gi|304321111|ref|YP_003854754.1| hypothetical protein PB2503_07784 [Parvularcula bermudensis HTCC2503] gi|303300013|gb|ADM09612.1| hypothetical protein PB2503_07784 [Parvularcula bermudensis HTCC2503] Length = 231 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 61/195 (31%), Gaps = 10/195 (5%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 EK + + L A + + L + Sbjct: 43 EEKVSNTARGAGLGALAGGVIGAIAGDDEAALAGAAAGAALGGGIGAYMDRQEQELRREL 102 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IR 269 GV + I + + F + PE L + +V+ + + Sbjct: 103 ASTGVRVQRVGNDIRLIM---PGNITFATGQASVRPEFYATLNSVAKVIERYQQTAVLVE 159 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPM 327 GHTD+ N +LS+ RA S L GV+ RI I G+ + ++ D Sbjct: 160 GHTDSV---GTEDSNVQLSIARAESVGNYLAAQGVAVPRIRAI-GYGESQPVASNGTDSG 215 Query: 328 NSANRRIDILVEDRQ 342 NRR++I + Q Sbjct: 216 RQQNRRVEIQLSPTQ 230 >gi|332298234|ref|YP_004440156.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168] gi|332181337|gb|AEE17025.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168] Length = 236 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 11/158 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248 ++ + L + +S D + + G++I++ F S+ ET Sbjct: 79 EKGKSLGLSVKRAVSLFAPDVKSNKITLSSDERGLVITLASD---SFFAPGSAALNIEET 135 Query: 249 IVVLQKIGEVLAHST---EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGV 304 + ++ + L+ I GHTD +P + NW LS RA + L GV Sbjct: 136 RATVLRLAQFLSSKELSGRRFRIEGHTDGTPVASKDFPSNWELSAARAVNVLHYLSDFGV 195 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 +E + ++G+A R K ++D NRR+DI++ D Sbjct: 196 NEAQF-SVAGYADTRPKFSNDTAEGRAYNRRVDIIILD 232 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 19/48 (39%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +W Y D +T+++ FF++++ D A+ Sbjct: 3 RKEPEKPSTAWMGTYGDMITLMLCFFVMLYNPTEVDAVQMAALTASLQ 50 >gi|114776523|ref|ZP_01451568.1| putative lipoprotein [Mariprofundus ferrooxydans PV-1] gi|114553353|gb|EAU55751.1| putative lipoprotein [Mariprofundus ferrooxydans PV-1] Length = 223 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 10/155 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + + V+ T + +++ F S+ + Sbjct: 73 ETAVQYLDRQEKAVRLSKDATAGNIVVQRETPQALKLTLSRDAA---FASGSNELSEQGK 129 Query: 250 VVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L + +L ++I GHTD++ A N LS RA + ++ GVS DR Sbjct: 130 QTLDDVATLLKRYKKTRLTITGHTDST---GTALFNQSLSERRALAVASYMISKGVSADR 186 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 I+ SG +D + NRR++IL+ Sbjct: 187 IAS-SGMGESSPAYPNDSAANRAKNRRVEILITTP 220 >gi|88811406|ref|ZP_01126661.1| OmpA/MotB [Nitrococcus mobilis Nb-231] gi|88791295|gb|EAR22407.1| OmpA/MotB [Nitrococcus mobilis Nb-231] Length = 439 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 95/299 (31%), Gaps = 14/299 (4%) Query: 56 ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 D DT + + + L++ + + + ++ L + + Sbjct: 142 QADIDTLRKVRETLEAKVGELVSHLEHSRGQLSAARDRTKALEALLAEAQERTQLAQKTL 201 Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 + + Q + + + Q + + + L + ++ + Sbjct: 202 QHRDIRIQDLVAQIEERQEALAHQHRLSAAADAKLGALRRQLQALQEQISALAAALHSSK 261 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRN 233 + +K+ + ++L K LS ++ + I + ++ Sbjct: 262 QTVVSQKVQLRRLGEQLNVALVKKVKELSYYRSEFFGRLRQVLGDVPEIRVVGDRFMFQS 321 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASPFRNIAR-DN 284 F S+ L ++ VL V+ + GHTD P N Sbjct: 322 ELFFPSGSAQIAAPGKDKLDRLATVLEEVSRRIPGDVDWVLQVDGHTDRRPIHTPRFPSN 381 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 W LS RA S L+ GV +R+ +G+ + + D + NRRI++ + R Sbjct: 382 WELSTARALSIVHYLVTRGVPPNRL-AAAGYGQYDPIDSRDSPQALARNRRIELRLTSR 439 >gi|70728655|ref|YP_258404.1| OmpA family protein [Pseudomonas fluorescens Pf-5] gi|68342954|gb|AAY90560.1| OmpA family protein [Pseudomonas fluorescens Pf-5] Length = 229 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S+ L I L S+ + + GHTD+ N +LS RA+S Sbjct: 125 FHFDSAKLTDADKTKLNTIVTRLKQEASSAQLRVTGHTDSV---GSDAYNQKLSDKRAHS 181 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 + L+ +G+ ++G + + NRR +I + Sbjct: 182 VVEYLISNGIPRSSFVSVTGAGESKPVADNKTAEGRAMNRRTEIQINR 229 >gi|260432828|ref|ZP_05786799.1| OmpA/MotB domain protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416656|gb|EEX09915.1| OmpA/MotB domain protein [Silicibacter lacuscaerulensis ITI-1157] Length = 580 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 78/220 (35%), Gaps = 16/220 (7%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 E + + G+DL + S + ++ Sbjct: 362 DDYKERNAEAEVQIQTLGQDLNAALARAASEERRRRLLEEAERIRLEAEAEKLAGQNQQL 421 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQK 254 K + L ++ + + G+ I + +FD S++ E + K Sbjct: 422 AKQAEDLQRYRSEFFGRLRDVLGDQEGVRIEGDRFVFSSEVLFDPGSAVLSDEGKREIAK 481 Query: 255 IGEVLAHS--------TEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKS-G 303 + E+L VI + GHTD P RDNW LS RA S + +++ G Sbjct: 482 VAEILRSVAAEIPPELNWVIRVDGHTDNIPVSGAGRYRDNWELSQGRALSVVRYMVEELG 541 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + +R+ +GF + +D + NRRI++ + +R Sbjct: 542 IPPNRL-AANGFGEFQPVDTADTPEARAKNRRIELKLTER 580 >gi|115372711|ref|ZP_01460017.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca DW4/3-1] gi|310823482|ref|YP_003955840.1| thrombospondin type 3 repeat protein, outer membrane domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115370192|gb|EAU69121.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca DW4/3-1] gi|309396554|gb|ADO74013.1| Thrombospondin type 3 repeat protein, outer membrane domain protein [Stigmatella aurantiaca DW4/3-1] Length = 5149 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 89/282 (31%), Gaps = 13/282 (4%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + P K ++ P +D DE + + G + Sbjct: 4862 ERKAPSPKPEEKPVVEPVAVPQQAPAPVCPQGPEDMDGFQDEDGCADPDNDGDGILDASD 4921 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL-EKSINKEENYFLPPLSKE 181 + + G L D ++ + + Sbjct: 4922 KCPNAPETKNGFQDEDGCPDEAPPPPPVDTDGDGLTDDVDRCPNEPEDKDGFRDEDGCPD 4981 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKS 240 D T++G+ ++ + I I+D+ F Sbjct: 4982 PDNDQDGIADASDKCPNQPETINGVTDEDGCPDKGKVKVLVEREKIVILDK---IFFTSK 5038 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + LP++ +L+++ +VL E+ + + G+TD +N RLS RA + + Sbjct: 5039 MDVILPKSFSLLKQVAQVLKAHPEIEKVRVEGYTDDQ---GPDEENLRLSERRAKAVLER 5095 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L++ GV+ +R+ + GF R ++ NRR++ V Sbjct: 5096 LVQEGVAAERLDSV-GFGEARPVASNKTSKGRDANRRVEFSV 5136 >gi|15889974|ref|NP_355655.1| porin [Agrobacterium tumefaciens str. C58] gi|15157937|gb|AAK88440.1| porin [Agrobacterium tumefaciens str. C58] Length = 220 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 10/150 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A GV I++++ F +P L + Sbjct: 78 NYMDGQEAELRAQLQGTGVSVTRRGDSIVLNMPSNIT---FATDQDQVIPPFYQTLDSVA 134 Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + +I I GHTD++ + N LS RA S L GV + RIS + GF Sbjct: 135 IVLNKFNRTLIDINGHTDST---GSLQHNQALSERRAASVANYLGARGVDQRRISTL-GF 190 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR+++L+ +G Sbjct: 191 GPSQPIASNATSDGRAQNRRVEVLISPLKG 220 >gi|262197986|ref|YP_003269195.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262081333|gb|ACY17302.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 1755 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 76/240 (31%), Gaps = 14/240 (5%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + + + + E N ++ D + D D + + Sbjct: 1513 PEEAETFNQFEDSDGCPDELLDSDGDNIFDHLDECPTVAEDLDGFMDEDGCPDADNDGDG 1572 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + +++ + + I L + V + L+ I Sbjct: 1573 VLDQADGCMNEAGPIENRGCPDADRDGDTIVDRLDNCPDE--AGPVENQGCVKEQLVQIT 1630 Query: 230 DQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARD 283 D + + F+ + + +L + +VL E+ ++ GHTD Sbjct: 1631 DNQIIILDRVYFETDKARIRSRSFALLNNVVQVLEAHPEIANVRIEGHTDDR---GSDAY 1687 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 N LS RA S L+++GV R+ + G+ R + +ANRR++ + Sbjct: 1688 NLDLSDRRAASVVSFLIEAGVDPVRLQSV-GYGETRPVRENGSREGRAANRRVEFHIVRD 1746 >gi|302185648|ref|ZP_07262321.1| thrombospondin type 3 repeat-containing OmpA/MotB protein [Pseudomonas syringae pv. syringae 642] Length = 344 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 8/197 (4%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 R + + + E + + SK+ A + + + Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V + + ++ FD S+ P + ++ + + + + + Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTT 268 Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 + GHTD+ N +LS RA + QVL+ GV R++ + G+ + + Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGETKPVADNA 324 Query: 326 PMNSA--NRRIDILVED 340 NRR++ VE Sbjct: 325 TEAGRAVNRRVEAEVEA 341 >gi|149203135|ref|ZP_01880106.1| OmpA/MotB [Roseovarius sp. TM1035] gi|149143681|gb|EDM31717.1| OmpA/MotB [Roseovarius sp. TM1035] Length = 210 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 10/139 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + V T +++++ +F + P L K+ + L Sbjct: 76 EAELRQQLDGDVRIVNTGDRLILTMPQD---ILFPVDGATVAPALRDDLFKVSQSLQAYP 132 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + GHTD+ A N LSL RA + VL GV R+ I G + Sbjct: 133 NTTVQVVGHTDSD---GDAGYNQGLSLRRANAVADVLASGGVPYARLRAI-GRGEDQPVA 188 Query: 323 ASDPMN--SANRRIDILVE 339 ++ + NRR++I++ Sbjct: 189 SNLTSEGKAQNRRVEIVIL 207 >gi|330951777|gb|EGH52037.1| thrombospondin type 3 repeat-containing OmpA/MotB protein [Pseudomonas syringae Cit 7] Length = 344 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 68/197 (34%), Gaps = 8/197 (4%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 R + + + E + + SK+ A + + + Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V + + ++ FD S+ P + ++ + + + + + Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTT 268 Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 + GHTD+ N +LS RA + QVL+ GV +R++ + G+ R + Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGANRVNSV-GYGESRPVADNA 324 Query: 326 PMNSA--NRRIDILVED 340 NRR++ VE Sbjct: 325 TEAGRAVNRRVEAEVEA 341 >gi|227538390|ref|ZP_03968439.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227241772|gb|EEI91787.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 438 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 14/214 (6%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 S S + + K + E + L + + Sbjct: 228 SKPALSNSNPVATLVNDYTAKYDQLKAEREALVAANNALKSQVDQLNADLKDDDGDGVAN 287 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSSIPLP 246 K +T SG D + T+ I + + + FD S P Sbjct: 288 KYDKCPNTPSGTKVDGAGCPLPVAETKVVEKIVVTEADKKVVDEAIKDLEFDLGKSTIRP 347 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + L ++ +L + + GHTD + + N RLS +RA + L G + Sbjct: 348 TSYPSLDRVASLLIEKNFSLKLAGHTDNT---GSMQTNLRLSKERAEAVKAYLTSKGANP 404 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RI +G+ ++ + NRR++ + Sbjct: 405 SRIEA-TGYGPNQPIATNATAEGRQQNRRVEFTL 437 >gi|49083000|gb|AAT50900.1| PA3692 [synthetic construct] Length = 262 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 88/239 (36%), Gaps = 13/239 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 T + +L+ +N + ++ + + + G+D L Sbjct: 21 STPPNANLEQARSNFSALQSQPGATKVAALETKDAGDWLAKADKAYQDGEDQRDVDQLAY 80 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N+ + A + Q ++ + + L D + + + T G + Sbjct: 81 LTNQRIELAKQTIVLRNAEAQLQNASAQRAQARLDARTAQL--DKLRSQLNAKQTSRGTM 138 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 ++ D +FD S P + +Q++ E L + E + G+TD++ A N Sbjct: 139 VTFGD----VLFDLDKSDLKPGAMRNIQQLAEFLQQNPERQVIVEGYTDST---GSANYN 191 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RLS RA S L+ G+S +R+ G+ ++ + NRR+++ + + Sbjct: 192 QRLSERRADSVRMALLSRGISPERV-ATRGYGKEYPVASNGTSSGRAMNRRVEVTISND 249 >gi|149197358|ref|ZP_01874409.1| chemotaxis MotB protein, putative [Lentisphaera araneosa HTCC2155] gi|149139376|gb|EDM27778.1| chemotaxis MotB protein, putative [Lentisphaera araneosa HTCC2155] Length = 265 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 85/240 (35%), Gaps = 13/240 (5%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 + + +Q KQ + + Q+S + T++ E+ + K Sbjct: 17 GTAGWLLWENDQLKQNKAQLESERTELLEQKSGLEDHLSTKEKEQIELSQALDQEIKKQE 76 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 L + K + K+ + L K+ L + + IS+ Sbjct: 77 ALIEAHQQTLDEFKRSVEEEKEEMSTLHSKLVEELQNEITSR-----EIKLKELNGRISL 131 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI--ARDNW 285 N +F ++ VL KI + L+ +T+ I + GHTD P ++NW Sbjct: 132 S-MENKILFPSGTANLGDRGTEVLNKISDALSETTDHIIRVEGHTDNVPLSGKGLYKNNW 190 Query: 286 RLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS RA S + +L+ ++ I ++ + + NRRI+I + + Sbjct: 191 ELSAARALSVVKELLITQQLNSKDIEAVA-MGEFHPVADNTTKDGRAQNRRIEIYLSPKP 249 >gi|88798562|ref|ZP_01114146.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Reinekea sp. MED297] gi|88778662|gb|EAR09853.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Reinekea sp. MED297] Length = 224 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 67/172 (38%), Gaps = 9/172 (5%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + I A + + L + + GV + T G + I+ Sbjct: 55 APKEERAKRAIIGAGIGGVAGGGVGYYMDQQEKELRDELVGTGVQVKRTEEGQIDLIM-- 112 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 FD +SS I L+ + +VL ++I GHTD+ N LS Sbjct: 113 PGNITFDVNSSTVADGFIPTLRSVAKVLKEYENTLVTISGHTDS---SGSEDYNQLLSEQ 169 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA S ++++ G+ +R+ +G+ + ++D + NRR++I ++ Sbjct: 170 RATSVANIILQEGIVVERV-AAAGYGELQPIASNDTPEGRAENRRVEITLDA 220 >gi|146307120|ref|YP_001187585.1| OmpF family protein [Pseudomonas mendocina ymp] gi|145575321|gb|ABP84853.1| OmpF family protein [Pseudomonas mendocina ymp] Length = 327 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD E+ ++ + + + + + + GHTD+ N LS RA + Sbjct: 220 FDFDKDRVKEESYGDIKNLADFMNQYPQTTTTVEGHTDSV---GSDAYNQGLSERRANAV 276 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340 VL+ GV +R++ + G+ R + D + NRR++ VE Sbjct: 277 RNVLVNQYGVDGNRVNAV-GYGETRPVADNATDSGRAINRRVEAEVEA 323 >gi|225024888|ref|ZP_03714080.1| hypothetical protein EIKCOROL_01776 [Eikenella corrodens ATCC 23834] gi|224942346|gb|EEG23555.1| hypothetical protein EIKCOROL_01776 [Eikenella corrodens ATCC 23834] Length = 219 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 10/158 (6%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 A+ + + + L + V + I +++ + F +SS Sbjct: 60 AALGCGVVGAGVGAYMDVQENRLRQELANTPVEVQRQGDQIKLTM---PSGVTFATNSSS 116 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ + L + VL E ++ GHTD + R N LS +RA S L Sbjct: 117 LSPDAVNSLNTVANVLTQYPETTITVAGHTDNT---GNDRINNPLSKNRARSVAGYLTGR 173 Query: 303 GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 GV+ RIS + G+ + + NRR++IL+ Sbjct: 174 GVAASRISTV-GYGSRSPVADNSTESGRAQNRRVEILI 210 >gi|227824113|ref|YP_002828086.1| putative outer membrane protein, OmpA/MotB domain protein [Sinorhizobium fredii NGR234] gi|227343115|gb|ACP27333.1| putative outer membrane protein, OmpA/MotB domain protein [Sinorhizobium fredii NGR234] Length = 221 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 11/151 (7%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + S L A G+ I++++ F +P L + Sbjct: 78 NYMDQQESELRAQLQGTGISVTRQGDRIILNMPSNIT---FATDRDQVIPPFYPTLDSVA 134 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + I + GHTD++ A N LS RA S L G+ + RIS + G+ Sbjct: 135 IVLRKYNKTLIDVDGHTDST---GSAAHNQDLSERRAASVANYLGSRGIDQRRISTM-GY 190 Query: 316 AHHRLKIASDPM--NSANRRIDILVED-RQG 343 R ++ + NRR++I + +QG Sbjct: 191 GMERPVASNSSEAGRAQNRRVEISIAPIKQG 221 >gi|224582121|ref|YP_002635919.1| hypothetical protein SPC_0290 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224466648|gb|ACN44478.1| hypothetical protein SPC_0290 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 434 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + + R MF V+ K +A Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD+ P + N LS RA +L GV R+ I G + Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416 Query: 325 DP--MNSANRRIDILVED 340 + NRR++ILV + Sbjct: 417 GSKAGRAKNRRVEILVVE 434 >gi|162448339|ref|YP_001610706.1| outer membrane porin precursor [Sorangium cellulosum 'So ce 56'] gi|161158921|emb|CAN90226.1| outer membrane porin precursor [Sorangium cellulosum 'So ce 56'] Length = 608 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 76/280 (27%), Gaps = 14/280 (5%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P + + P + +D R ++ Sbjct: 331 PHTAGVRSPDPTKNGCPPPKDADHDGILDAVDACPAVAGVASPDPKKNGCPPPGDRDKDG 390 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 I E + + G D + + + P A Sbjct: 391 ITD-DVDACPEQAGPANDDPKQHGCPPPPDRDGDTVPDASDACPDLPGLVTTDPATNGCP 449 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FDKSSSIPLP 246 D I + + + + + + FD + P Sbjct: 450 GDTD-GDGIRDDKDACPNEKGKPNEDPTQNGCPVAVRVTETEIVILQQVQFDTGKATIRP 508 Query: 247 ETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + +L ++ VL E++ I GHTD + N +LS RA S + L++ G+ Sbjct: 509 VSNELLDEVAGVLKDHPEILKIEVQGHTDDR---GTRQFNTKLSQARAESVLKALVERGI 565 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + R+ G+ + NRR+ + +++ Sbjct: 566 AAQRLQA-KGYGPDVPIAENKTEAGRQKNRRVQFNIIEKE 604 >gi|330503542|ref|YP_004380411.1| OmpF family protein [Pseudomonas mendocina NK-01] gi|328917828|gb|AEB58659.1| OmpF family protein [Pseudomonas mendocina NK-01] Length = 326 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD E+ ++ + + + + + + GHTD+ N LS RA + Sbjct: 219 FDFDKDRVKEESYGDIKNLADFMNQYPQTTTTVEGHTDSV---GSDAYNQGLSERRANAV 275 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340 VL+ GV R++ + G+ R + D + NRR++ VE Sbjct: 276 RNVLVNQYGVDGSRVNAV-GYGETRPVADNATDSGRAINRRVEAEVEA 322 >gi|320354327|ref|YP_004195666.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122829|gb|ADW18375.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032] Length = 248 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 80/244 (32%), Gaps = 13/244 (5%) Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161 + + L + L L + K + S K ++T Sbjct: 1 MAKEPECPPPGLPMWMATYSDLVTLLLTFFVLLLTMASMDPTKFEQAKTSIKDAFGWRTT 60 Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + P I R + + + + + Sbjct: 61 AAPVPFSLPILPSPPKAKFTPIPRETAVPRFKRIKNDLELAKLQAQVEA------VQQDN 114 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281 I++ I + +FD+ + P + +L+K+ +++ + I GHTD++P Sbjct: 115 DSIILRIHES---VLFDEGQATLNPASYPILRKVADIIRPLPMSMRIEGHTDSTPMAGAT 171 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSE-DRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 NW LS+ RA + + + DR+S G+ R + + + NRR+D ++ Sbjct: 172 TSNWDLSVARAVAVMSFYHRGELFALDRMSAA-GYGDTRPLAPNTTKDNMAKNRRVDFVL 230 Query: 339 EDRQ 342 + Sbjct: 231 RSNR 234 >gi|297181726|gb|ADI17907.1| flagellar motor protein [uncultured Desulfobacterales bacterium HF0200_07G10] Length = 524 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 75/167 (44%), Gaps = 9/167 (5%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVK-GVLFETTRTGILISIIDQRNTPMFDK 239 E + A++ ++RL++L S + ++ + + +T+++ +++ + +F Sbjct: 362 EALNAVEVQERLENLEMTKSDDIMSEISGMAEEADLDVDTSKSKVIVRV---PGASLFKP 418 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297 + + VL + + + ++GHTD P NW LS RA + + Sbjct: 419 AQATLQLSARPVLDAVINTVNKYPDYKIHVQGHTDDDPISTAMFPTNWELSAARATAVLR 478 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + G +R++ +G+A ++++ + NRR++ ++E + Sbjct: 479 YFIDKGADPERMTA-TGYADIFPLVSNETPYGRAKNRRVEFVLEKEK 524 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 21/39 (53%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 W ++D +T++M FF++M+ I + + T K+ Sbjct: 310 CEEGAPLWMATFSDMVTLVMVFFILMYAIASKNVQTFKS 348 >gi|237803483|ref|ZP_04591068.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025465|gb|EGI05521.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6] Length = 271 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 101/248 (40%), Gaps = 12/248 (4%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 + + + S D + + ++ I + ++E + L ++ Sbjct: 26 QDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLTSYLGSGADVSHYAYL 85 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218 S+ + + N L K+ +++ +L K++S ++ + + Sbjct: 86 SSRYSEIAREHSNLMLSQERLVKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATT 145 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 146 QTDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 ++N +LS DRA + VL+ GV E RI ++ G+ A+ + NRR++ Sbjct: 200 -GDRQENLKLSKDRAQAVADVLIDLGVDEKRI-QVEGYGQQFPVDANTSERGRAQNRRVE 257 Query: 336 ILVEDRQG 343 I+ D +G Sbjct: 258 IVFSDEKG 265 >gi|253701833|ref|YP_003023022.1| OmpA/MotB domain protein [Geobacter sp. M21] gi|251776683|gb|ACT19264.1| OmpA/MotB domain protein [Geobacter sp. M21] Length = 228 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 6/113 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +FD + P+ L + L S I+I GHTD++ N LS R Sbjct: 110 PSGILFDVGKDVLKPDAKDSLSRAAATLKDSQTTITIEGHTDST---GSNAINQPLSERR 166 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 A L+ GV +++ I G+ R + +D + NRR+ I + + Sbjct: 167 ANRVRDYLVSQGVPGAKMAAI-GYGSSRPAVPNDSDANRALNRRVQIELTPNE 218 >gi|114764072|ref|ZP_01443311.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601] gi|114543430|gb|EAU46445.1| OmpA domain protein [Roseovarius sp. HTCC2601] Length = 221 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 10/139 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + V T +++++ +F S + ++ +G L Sbjct: 87 EAELRQQLGNDVGIRNTGDRLIVTMPQD---ILFGFDSDTLRNDLQADIRTVGSSLLQYP 143 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + GHTD+ A N LS RA S VL+ SGV RI + G Sbjct: 144 NTSVQVVGHTDSD---GDAGYNQGLSQRRAQSVANVLVSSGVPSSRI-SVIGRGEAAPVA 199 Query: 323 ASDPMN--SANRRIDILVE 339 ++ + NRR++I++ Sbjct: 200 SNLTPEGKAQNRRVEIVIL 218 >gi|323525137|ref|YP_004227290.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001] gi|323382139|gb|ADX54230.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001] Length = 217 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 ++ FD +S P VL ++ + L + E + + GHTD++ N LS++ Sbjct: 103 PSSVTFDTNSYAIKPSFAPVLDQLTQTLQQNPEVIAQVVGHTDST---GQPAYNQTLSVN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 RA S L + GV+ R+S G ++ + +ANRR++I + Sbjct: 160 RAQSVVGFLEQRGVAPQRLSA-QGMGQNQPIADNSTEAGRAANRRVEIYLRA 210 >gi|163740474|ref|ZP_02147868.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10] gi|161386332|gb|EDQ10707.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10] Length = 216 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 10/205 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + ++ K ++ L + A+ + Sbjct: 14 GLTACTDPATIGTPGSKTQNGALIGGLIGAGVGAAANDSDRGLGAVTGALVGAAAGSVIG 73 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 ++ + L G+ T +++S+ + F S+ P L K+ Sbjct: 74 NQLDAQERELRQSISNDGISIVNTGDRLIVSLPNDLT---FATDSAAVSPAVRSDLNKVA 130 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L + + GHTD+ A N LS RA + + GV +R+ +I G Sbjct: 131 SSLVRYPNSQVQVIGHTDSD---GDAGYNQGLSERRANAVADQIQAGGVPYNRV-QIIGR 186 Query: 316 AHHRLKIASDPMN--SANRRIDILV 338 + ++ + NRR++I+V Sbjct: 187 GESQPVASNLTAEGKARNRRVEIVV 211 >gi|330504866|ref|YP_004381735.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] gi|328919152|gb|AEB59983.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] Length = 222 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 46/147 (31%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L GV + I + + F S+ L + Sbjct: 81 DKQEEELRRSMQGTGVEVQRQGDVIQLIM---PGNITFATDSAQIASSFYQPLNNLANSF 137 Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I + GHTD++ N LS RA S L+ G+ R+S G Sbjct: 138 RQYNQNSIEVVGHTDST---GSHSHNMALSQRRAQSVADYLLAQGIDPSRVST-RGMGPD 193 Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343 + ++ + NRR+++ + G Sbjct: 194 QPVASNATADGRAQNRRVEVTLRPLPG 220 >gi|169123287|gb|ACA47115.1| OmpF [Pseudomonas putida] Length = 343 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272 V + + ++ FD S+ P + ++ + + + ++ GHT Sbjct: 214 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHT 273 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + QVL GV R+ + G+ R + Sbjct: 274 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVADNKTEAGRA 329 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 330 VNRRVEAQVEA 340 >gi|229013711|ref|ZP_04170840.1| OmpA/MotB domain protein [Bacillus mycoides DSM 2048] gi|228747633|gb|EEL97507.1| OmpA/MotB domain protein [Bacillus mycoides DSM 2048] Length = 234 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 90/199 (45%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S N E ++++ K L+ L KKI ++ Sbjct: 36 GGTGNKEFLSDQKPNEEKELSANSLEAEQAKKQAEDRAKEKKEMDELKALQKKIDQYINE 95 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 96 ---KQLSSSFQTKLTEKGLMLTILEN---VLFDSGKADVKLESLGIAKEMSNLLVSASPR 149 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S + G+ +R Sbjct: 150 EITVSGHTDTVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAV-GYGEYRSIA 208 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 209 PNDTPEGKAKNRRVEVFIL 227 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 3/100 (3%) Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 +T+L A F+V++ +++ D K + F L + + + Sbjct: 1 MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKEFLSDQKPNEEKELSA 57 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S++ K + + + + + L+ I N +Q Sbjct: 58 NSLEAEQAKKQAEDRAKEKKEMDELKALQKKIDQYINEKQ 97 >gi|229090688|ref|ZP_04221921.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42] gi|228692630|gb|EEL46356.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42] Length = 126 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 8/130 (6%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274 + TG+ + I+D +FD + PE ++ ++ I + GHTD+ Sbjct: 1 MNVYREDTGVSVVIVDNL---IFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDS 57 Query: 275 SPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSA 330 P N NW LS RA + L++ V + R++ + G+A + + +D Sbjct: 58 RPIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAV-GYADTKPVVPNDSPQNWEK 116 Query: 331 NRRIDILVED 340 NRR+ I +++ Sbjct: 117 NRRVVIYIKE 126 >gi|193212466|ref|YP_001998419.1| OmpA/MotB domain-containing protein [Chlorobaculum parvum NCIB 8327] gi|193085943|gb|ACF11219.1| OmpA/MotB domain protein [Chlorobaculum parvum NCIB 8327] Length = 232 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F +SS P + ++ + VL + + + GHTD+ N LS RA S Sbjct: 114 LFSTNSSTLNPNSRYNIENLARVLNRYPDTNVVVEGHTDSI---GSEATNQVLSERRAES 170 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 +L GV +R++ + G+ R ++ NRR+++L+ Sbjct: 171 VVSLLRAYGVYGNRLTAV-GYGETRPVATNETEMGRRQNRRVEVLIYANN 219 >gi|4580968|gb|AAD24555.1|AF117963_1 OprF [Pseudomonas cichorii] Length = 346 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD ++ P + ++ + + + + + + GHT Sbjct: 217 NVTVDADGCPAVAEVVRVELDVKFDFDKAVVKPNSYGDIKNLADFMQQYPQTTTTVEGHT 276 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + QVL+ GV +R++ + G+ R + Sbjct: 277 DSV---GPDAYNQKLSERRASAVKQVLVNQYGVGANRVNSV-GYGETRPVADNATEAGRA 332 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 333 VNRRVEAEVEA 343 >gi|19705338|ref|NP_602833.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19705349|ref|NP_602844.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713317|gb|AAL94132.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713330|gb|AAL94143.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 151 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 5/132 (3%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 K V + ++I+ + FD S P+ +L I E + + I+I GHT Sbjct: 14 KNVDILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYDLLNNIKEFVEQNNYEITIVGHT 73 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330 D+ N++LS RA S L++ G+SEDRI I + + + Sbjct: 74 DSI---GSNAYNFKLSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQ 130 Query: 331 NRRIDILVEDRQ 342 NRR++ + R+ Sbjct: 131 NRRVEFKLVQRE 142 >gi|242278087|ref|YP_002990216.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] gi|242120981|gb|ACS78677.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] Length = 356 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F E + L + +L + + GHTD+ N LS RA S Sbjct: 254 FGFDKYQITDEMVPALTEAATMLEEFPNLKVLVGGHTDS---SGSEAYNQGLSERRAKSV 310 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L +G++ R+ ++ G+ K + NRR++I VED Sbjct: 311 ADWLAANGIAPKRL-EVKGYGEMNPKYDNKTKEGRKLNRRVEIDVED 356 >gi|198245916|ref|YP_002214234.1| hypothetical protein SeD_A0303 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197940432|gb|ACH77765.1| SciP protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326621978|gb|EGE28323.1| SciP protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 434 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + + R MF V+ K +A Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD+ P + N LS RA +L GV R+ I G + Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416 Query: 325 DP--MNSANRRIDILVED 340 + NRR++ILV + Sbjct: 417 GSKAGRAKNRRVEILVVE 434 >gi|76817452|ref|YP_336363.1| hypothetical protein BURPS1710b_A1205 [Burkholderia pseudomallei 1710b] gi|134278396|ref|ZP_01765110.1| ompA family protein [Burkholderia pseudomallei 305] gi|167924203|ref|ZP_02511294.1| hypothetical protein BpseBC_36953 [Burkholderia pseudomallei BCC215] gi|217422136|ref|ZP_03453639.1| ompA family protein [Burkholderia pseudomallei 576] gi|254185740|ref|ZP_04892258.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] gi|254263509|ref|ZP_04954374.1| ompA family protein [Burkholderia pseudomallei 1710a] gi|76581925|gb|ABA51399.1| ompA family protein [Burkholderia pseudomallei 1710b] gi|134250180|gb|EBA50260.1| ompA family protein [Burkholderia pseudomallei 305] gi|157933426|gb|EDO89096.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] gi|217394367|gb|EEC34386.1| ompA family protein [Burkholderia pseudomallei 576] gi|254214511|gb|EET03896.1| ompA family protein [Burkholderia pseudomallei 1710a] Length = 438 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + V +I + R +F S+ + + VL ++ + L Sbjct: 286 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 342 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G+TD +P NW LS +RA + ++ +RI+ G Sbjct: 343 RVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 401 Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343 +D + NRR++I + G Sbjct: 402 PVAPNDSPANRARNRRVEITLMLAPG 427 >gi|256819127|ref|YP_003140406.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256580710|gb|ACU91845.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271] Length = 230 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 51/142 (35%), Gaps = 7/142 (4%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + G + GI+++ + FD + ++ L K+ +L Sbjct: 80 QAKKIEEEIPGADVKRVDDGIVVTFDENNGGVYFDTNKYNINNKSRQTLDKLSAILKEYP 139 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + + GHTD N LS RA + G+ R + + Sbjct: 140 DTNVIVAGHTDNV---GKDEYNLGLSQRRAQAVTNYFKSKGLVGSRFTT-KWYGERNPVA 195 Query: 323 ASDPM--NSANRRIDILVEDRQ 342 +++ + NRR+++++ + Sbjct: 196 SNETADGRAKNRRVNVVIVPNE 217 >gi|224372468|ref|YP_002606840.1| thrombospondin type 3 repeat:OmpA/MotB [Nautilia profundicola AmH] gi|223589113|gb|ACM92849.1| thrombospondin type 3 repeat:OmpA/MotB [Nautilia profundicola AmH] Length = 373 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 7/101 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P+ + +++ E L + I+G+TD+ + A N +LS RA + Sbjct: 271 FDNDSADIKPQFMKKIEEFAEFLKQNPAYKAEIQGYTDS---KGSAEYNQKLSERRAKAV 327 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334 Y+VL+K G+S+DR+ G+ ++D + + NRR+ Sbjct: 328 YEVLIKQGISKDRL-SYKGYGEANPVASNDTPDGKAQNRRV 367 >gi|149928286|ref|ZP_01916529.1| OmpA/MotB [Limnobacter sp. MED105] gi|149823015|gb|EDM82257.1| OmpA/MotB [Limnobacter sp. MED105] Length = 218 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 46/149 (30%), Gaps = 7/149 (4%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +Q+ + +I+ + FD + Sbjct: 64 AIQECDPDLIPKKPAPAPVAAPAPAPEPAPAPTPVITKVSLEADAYFDFDKATLKQGGKD 123 Query: 251 VLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 + L I GHTD+ N +LS RA + ++ GVS DRI Sbjct: 124 RIDSEIAKLGQVDLNSVIAIGHTDSI---GSDAYNQKLSERRAQAVKDYMVSKGVSADRI 180 Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDI 336 +I G + + + NRR++I Sbjct: 181 -QIKGMGESQPVADNKTREGRAKNRRVEI 208 >gi|260576491|ref|ZP_05844481.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] gi|259021374|gb|EEW24680.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] Length = 464 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 92/300 (30%), Gaps = 19/300 (6%) Query: 60 DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119 + + + L + D + + + + + Sbjct: 166 EKLQGADAELTAMTLALEAQRQKAEDTLTLLAAAETKAAQDAEILSGKEALLATARAALA 225 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS---EKGKDLCKSTDLEKSINKEENYFLP 176 + + L N Q + + +++ + N L Sbjct: 226 TETERSAESARQVALLNQQIAALRSQLGELQGMLDAAAAKDVAAKVQLEALGSQLNSALA 285 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNT 234 ++ E+ + + + + L+ ++ + R G+ I + Sbjct: 286 QVASEQRRRADLEAAEAERLRAEAQDLAKFRSEFFGELSKVLAGRQGVRIVGDRFVFSSE 345 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRN--IARDN 284 +F+ S+ PE + + L +I + GHTD P DN Sbjct: 346 VLFNPGSADLAPEGRAQIAGVVATLNEIAAQIPPGIDWIIRVDGHTDNVPLSGQGEFADN 405 Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 W LS RA + + + + G S +R+ +GF ++ D + NRRI++ + +R Sbjct: 406 WELSQARALAVVRYMQDNLGFSPERL-AATGFGEYQPVAVGDAPETRALNRRIELKLTER 464 >gi|154250728|ref|YP_001411552.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154154678|gb|ABS61895.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1] Length = 224 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 52/144 (36%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ F +SS + VL + Sbjct: 82 YMDKQEAELTQRLRASGVSVTRVGNDIILNM---PGNVTFATNSSDINAKFYDVLNSVAI 138 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + I + GHTD++ + N LS RA S L+ V R I G Sbjct: 139 VLKEYDKTLIDVTGHTDST---GSDQYNLELSQKRAQSVASYLIGQSVDSRRFY-IVGAG 194 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 + +D NRR++I + Sbjct: 195 ESQPIATNDTPQGREQNRRVEIRL 218 >gi|120555732|ref|YP_960083.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8] gi|120325581|gb|ABM19896.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8] Length = 236 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I + + FD S L+ + Sbjct: 96 YMDRQEAQLRQKLEGTGVRVVRNGDQIDLIM---PGNITFDTDQSTIRSGFTGTLESVAL 152 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL +I I GHTD++ N LS RA S L+ G+ R ++ +G+ Sbjct: 153 VLKEFDKTIIQIEGHTDST---GSDSYNQLLSERRASSVRDFLLNQGIEPRR-TRATGYG 208 Query: 317 HHRLKIASDPMNSA--NRRIDILV 338 ++D NRR+++ + Sbjct: 209 ERYPIASNDTAAGREQNRRVELTL 232 >gi|261417146|ref|YP_003250829.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373602|gb|ACX76347.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326585|gb|ADL25786.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 232 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 10/154 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT---PMFDKSSSIPLPETI 249 +D + +L+G V + GI + D R+ F S+ +P ++ Sbjct: 77 EDSYTILCESLTGPFECGETPYVSRTASTGGISVVFDDTRSELTGVTFKAGSAELVPSSL 136 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L L + + I + GHT + A N +LS DRA S +++ G+ DR Sbjct: 137 KTLNAAIAGLKRNPKAKIEVEGHTSSD---GSAELNQQLSEDRANSVRNYMIEQGIDADR 193 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 ++ + G+ R K + NRRI++ V + Sbjct: 194 VTAV-GYGPSRPKGDNSTEAGRRANRRIELKVLN 226 >gi|293608672|ref|ZP_06690975.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829245|gb|EFF87607.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 473 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 78/271 (28%), Gaps = 17/271 (6%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P L T KG + L +S T+Q + + Sbjct: 215 PASLTLSTDDKGAVSQCQAGIGDQGFLATLQTQVKQVFSSTQDCNVDTSQTYAAGFTDKD 274 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 SL +K ++ + +P ++ Sbjct: 275 ALAGVLGALKGVPNASLEWIGDKITLKAGDAAALAALTAKVKALVPHTEVVSTAPETAEQ 334 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + + L + +N+ L + I+ F SS + Sbjct: 335 SVSNSLTASQTALGSIDPNNVDVNALVKALNLQIIN----------FASGSSDIPADNKA 384 Query: 251 VLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L + +L + V ++ GHTD++ A N LS RA + L+ GV ++ Sbjct: 385 ILDQAATLLNKVSGVKLNVGGHTDST---GNAAANKALSQRRAQAVVDYLISKGVDGTKL 441 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338 G + + NRRI+ V Sbjct: 442 VA-QGHGSDQPVAENTTEEGRFKNRRIEFSV 471 >gi|322418405|ref|YP_004197628.1| OmpA/MotB domain-containing protein [Geobacter sp. M18] gi|320124792|gb|ADW12352.1| OmpA/MotB domain protein [Geobacter sp. M18] Length = 228 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 9/141 (6%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + +++ + +FD PE L K L S Sbjct: 85 QAAALKKSMPQAEVIRDGDKVYVAL---PSGILFDVGKDTLKPEAKDALSKAVPTLRDSQ 141 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I I GHTD++ N LS RA L+ GV +++ + G+ R +A Sbjct: 142 TTIVIEGHTDST---GSNAVNQPLSERRAGRVRDFLISQGVPGSKMAAV-GYGSTRPAVA 197 Query: 324 SDPM--NSANRRIDILVEDRQ 342 +D + NRR+ I + + Sbjct: 198 NDTEANRALNRRVQIELSPNE 218 >gi|33597667|ref|NP_885310.1| outer membrane protein A precursor [Bordetella parapertussis 12822] gi|33602447|ref|NP_890007.1| outer membrane protein A precursor [Bordetella bronchiseptica RB50] gi|33574095|emb|CAE38420.1| outer membrane protein A precursor [Bordetella parapertussis] gi|33576886|emb|CAE33966.1| outer membrane protein A precursor [Bordetella bronchiseptica RB50] Length = 193 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L ++ + I GHTD+ N +LS RA + Sbjct: 86 FFDFDKSTLKPEGRQLLDQVAQQAGTIDLETIIAVGHTDSI---GTEAYNQKLSERRAAA 142 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+ G+ +RI G + ++ + NRR++I + + Sbjct: 143 VKTYLVSKGIDPNRIYT-EGKGELQPIASNKTREGRAQNRRVEIEIVGSR 191 >gi|33592100|ref|NP_879744.1| outer membrane protein A precursor [Bordetella pertussis Tohama I] gi|33571744|emb|CAE41245.1| outer membrane protein A precursor [Bordetella pertussis Tohama I] gi|332381516|gb|AEE66363.1| outer membrane protein A precursor [Bordetella pertussis CS] Length = 193 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L ++ + I GHTD+ N +LS RA + Sbjct: 86 FFDFDKSTLKPEGRQLLDQVAQQAGTIDLETIIAVGHTDSI---GTEAYNQKLSERRAAA 142 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+ G+ +RI G + ++ + NRR++I + + Sbjct: 143 VKTYLVSKGIDPNRIYT-EGKGELQPIASNKTREGRAQNRRVEIEIVGSR 191 >gi|88705660|ref|ZP_01103370.1| outer membrane protein; OprF [Congregibacter litoralis KT71] gi|88700173|gb|EAQ97282.1| outer membrane protein; OprF [Congregibacter litoralis KT71] Length = 247 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 7/133 (5%) Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISI 268 N +GV + T I ++ + FD S+ ++ L V+ + + + Sbjct: 119 NTPEGVKVDATGCPIKDEVVLTVDRLSFDFDSAALDAQSRAALDAAVAVIKSHSSVKMDV 178 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-- 326 G+TD N LS RA +A L+ GV D++ + +G ++D Sbjct: 179 VGYTDT---SGPEEYNLGLSKRRAQAAVDYLVSQGVDADQL-RATGRGEADPVASNDTRD 234 Query: 327 MNSANRRIDILVE 339 NRR++++V Sbjct: 235 GRERNRRVELVVR 247 >gi|83859947|ref|ZP_00953467.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633] gi|83852306|gb|EAP90160.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633] Length = 338 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 101/322 (31%), Gaps = 21/322 (6%) Query: 37 YAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQ 95 + D T+L+ ++++++ + + + + S+ Sbjct: 21 FVDALATLLL---VIVFLLAVFTAGQFALSQALTGRDEQLAELNGRLATLAEELNLAQSE 77 Query: 96 NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK-- 153 N+ +T+ + L + Q L+ + +S E N + + Sbjct: 78 NERLSLRVSTLTQENGALAETNAGLTSQIAGLQEGLAAARSSLAEEEALNEEAQATVALL 137 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 + + +N+ N ++ + + +RL + L+ ++ + Sbjct: 138 NNQMAALREELARLNEALNASEAREAELEAEVVNLGRRLNAALASEVARLARYRSEFFGR 197 Query: 214 GVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHST 263 + R+G+ + +F S+ E L I + + Sbjct: 198 LIEVLGDRSGVRVVGDRFVFETDVLFASGSAELSEEGRRSLAPIADAIIQLTDEIPDDLD 257 Query: 264 EVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 V+ + GHTD P NW LS R+ S GV R+ GF H Sbjct: 258 WVLRVDGHTDRVPLGPNAPFESNWELSTARSLSVIAYFESRGVPPRRLLAA-GFGEHYPI 316 Query: 322 IASDPMN--SANRRIDILVEDR 341 + NRRI++ + R Sbjct: 317 AEGRTQEAYARNRRIELKLTSR 338 >gi|84501356|ref|ZP_00999561.1| hypothetical protein OB2597_13363 [Oceanicola batsensis HTCC2597] gi|84390647|gb|EAQ03135.1| hypothetical protein OB2597_13363 [Oceanicola batsensis HTCC2597] Length = 350 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 7/117 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 I+ + F SS + +L I ++++ I++ GHTD+ A Sbjct: 236 RFEILSRTGNIYFRPGSSRLDDASAPLLDSIYDIISRCPGLRIAVAGHTDSI---GSAAS 292 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 N LS RA S L G+ + R+ + G+ R + D S NRRI+ V Sbjct: 293 NQSLSERRASSVVDYLAAKGLGQGRMIAV-GYGEARPVADNGTDAGRSRNRRIEFSV 348 >gi|15598888|ref|NP_252382.1| Lipotoxon F, LptF [Pseudomonas aeruginosa PAO1] gi|107103206|ref|ZP_01367124.1| hypothetical protein PaerPA_01004275 [Pseudomonas aeruginosa PACS2] gi|116051689|ref|YP_789472.1| putative outer membrane protein, OmpA [Pseudomonas aeruginosa UCBPP-PA14] gi|218890031|ref|YP_002438895.1| putative outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|254236602|ref|ZP_04929925.1| hypothetical protein PACG_02605 [Pseudomonas aeruginosa C3719] gi|254242387|ref|ZP_04935709.1| hypothetical protein PA2G_03131 [Pseudomonas aeruginosa 2192] gi|296387801|ref|ZP_06877276.1| putative outer membrane protein precursor [Pseudomonas aeruginosa PAb1] gi|313109098|ref|ZP_07795070.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] gi|9949856|gb|AAG07080.1|AE004788_10 Lipotoxon F, LptF [Pseudomonas aeruginosa PAO1] gi|115586910|gb|ABJ12925.1| putative outer membrane protein, OmpA [Pseudomonas aeruginosa UCBPP-PA14] gi|126168533|gb|EAZ54044.1| hypothetical protein PACG_02605 [Pseudomonas aeruginosa C3719] gi|126195765|gb|EAZ59828.1| hypothetical protein PA2G_03131 [Pseudomonas aeruginosa 2192] gi|218770254|emb|CAW26019.1| probable outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|310881572|gb|EFQ40166.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] Length = 261 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 89/239 (37%), Gaps = 13/239 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 T + +L+ +N + + ++ + + + G+D L Sbjct: 21 STPPNANLEQARSNFSALQSQPDATKVAALETKDAGDWLAKADKAYQDGEDQRDVDQLAY 80 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N+ + A + Q ++ + + L D + + + T G + Sbjct: 81 LTNQRIELAKQTIVLRNAEAQLQNASAQRAQARLDARTAQL--DKLRSQLNAKQTSRGTM 138 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 ++ D +FD S P + +Q++ E L + E + G+TD++ A N Sbjct: 139 VTFGD----VLFDLDKSDLKPGAMRNIQQLAEFLQQNPERQVIVEGYTDST---GSANYN 191 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RLS RA S L+ G+S +R+ G+ ++ + NRR+++ + + Sbjct: 192 QRLSERRADSVRMALLSRGISPERV-ATRGYGKEYPVASNGTSSGRAMNRRVEVTISND 249 >gi|326799819|ref|YP_004317638.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] gi|326550583|gb|ADZ78968.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] Length = 434 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 69/215 (32%), Gaps = 12/215 (5%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 ++ +N + ++ + KEEN L + Sbjct: 223 ALGDATKPFLGNRNPVVDMRKEYQASYDELAAALKAQKEENEALKAQLTTDLADDDGDGV 282 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR------NTPMFDKSSSIPL 245 K + V + + I ++ D+R FD S + Sbjct: 283 ANKFDKCPGTAADAKVDGSGCPLPEAKKVVQQITVTEEDRRVVDEAIKNLEFDLSKATIR 342 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 P + L K+ +L + + GHTD + + N RLS +RA + L+ G + Sbjct: 343 PTSYPSLDKVARLLVEKNFSLKLAGHTDNT---GSMKLNMRLSKERAEAVKAYLVSKGAN 399 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RI +G+ + + NRR++ + Sbjct: 400 PSRIEA-TGYGPTQPIATNATAEGRQANRRVEFTL 433 >gi|260494612|ref|ZP_05814742.1| OmpA family membrane protein [Fusobacterium sp. 3_1_33] gi|260197774|gb|EEW95291.1| OmpA family membrane protein [Fusobacterium sp. 3_1_33] Length = 396 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 87/274 (31%), Gaps = 10/274 (3%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N + + DE +R+ VD + ++ + Sbjct: 125 NKSVQTDGKGAGQYTDENVTIQRNEDGSGQYINKVTGVTLQVDAQGEGKYLDEKNRVSFQ 184 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + E ++T + + +E + + Y + K K Sbjct: 185 IGADGTGVYKDEKNNVTVTINEKNATYTSGDITMENNGDGSGTYNDKAKNLLIENDGKGK 244 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPE 247 ++ K L + I + +I + +FD PE Sbjct: 245 AKITFNGKTTEVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDVRPE 304 Query: 248 TIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 VL+ + VL + + I GHTD+ + N LS +RA + L G++ Sbjct: 305 AEEVLKNLAIVLKEADIKAFEIDGHTDSD---AGDKHNQILSENRANAVKNFLTSQGITA 361 Query: 307 DRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 + I G+ R ++D NRR++I++ Sbjct: 362 E--ITIKGYGKTRPIASNDTPEGKQKNRRVEIVI 393 >gi|186476941|ref|YP_001858411.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815] gi|184193400|gb|ACC71365.1| OmpA/MotB domain protein [Burkholderia phymatum STM815] Length = 217 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ FD +S P VL ++ + L + EV+ + GHTD++ N LS++ Sbjct: 104 PSSVTFDTNSYAIKPSFAPVLSQVAQTLNQNPEVVAQVVGHTDST---GQPAYNQTLSVN 160 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 RA S Q L GV+ R+S +G ++ ++ + NRR++I + Sbjct: 161 RAQSVAQQLATDGVAPQRLSA-TGMGANQPIADNNTETGRAQNRRVEIYLRA 211 >gi|23010955|ref|ZP_00051470.1| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum MS-1] Length = 464 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 66/288 (22%), Positives = 113/288 (39%), Gaps = 28/288 (9%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 NP + + A+ + + + + +++ D+ S N + ++ Sbjct: 185 NPGALDTVAAAPSEARLDARARTGAPGRAKEATKDASKESARDVARQSLNDAMRQAGMKL 244 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM--- 186 +++ K + S + D + + K P SKE A+ Sbjct: 245 ASAEPMPIKEAPPAKQPDSTKSAEAPPEGPVADAKAADIKPAPKAEAPPSKEPAAAIPAE 304 Query: 187 ----KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 L L +I+ + L V T G+LISI D+ N MF S+ Sbjct: 305 GAKSAETAALAALKDEIAKAVPSLPMGAPAPRVEVRRTGEGVLISITDEINFSMFGIGSA 364 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL--DR--------A 292 P P+ + L++I ++L + +RGHTDA PFR+ DNWRLS R A Sbjct: 365 EPTPKVVKALERIAKILNTRPGRVVVRGHTDARPFRSETYDNWRLSRPGRRWPPTCWCAA 424 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 S + G S ++ + + +IA+DP + NRRI+IL+ Sbjct: 425 ASTRR-----GSSASKLCR------PQPRIAADPKAAENRRIEILLRG 461 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 77/205 (37%), Gaps = 2/205 (0%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 + + IIIK+ + ++ G+WKI ADFMT +MA FLVMW+IN+T + K+ I +Y Sbjct: 3 EHAHEIIIIKRH-GDHEDGHHGGAWKIALADFMTAMMALFLVMWLINSTSKEQKQTIAEY 61 Query: 69 FNPFGKNLMTAS-KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 FNP +T KG+ D QN P + + + G+ + + L Sbjct: 62 FNPVKLAEVTHDRKGVNDPQNTPNDPAPSGKGKGDGGSAEGSGKADAAGAPGSRARESAL 121 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + + + +E S L + F P + L + Sbjct: 122 FQDPYAVLAKLAAEADAAGPEAASADANPLEVGQPGVAGGETGRDPFDPLYWQVAALPRQ 181 Query: 188 RKKRLQDLAKKISSTLSGLVADNIV 212 R L ++ + Sbjct: 182 RTDNPGALDTVAAAPSEARLDARAR 206 >gi|294678506|ref|YP_003579121.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB 1003] gi|294477326|gb|ADE86714.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003] Length = 422 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 16/256 (6%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + K + + T + + + + + E ++ Sbjct: 168 AEKQAALKAVAEKTLTETRAESDRKAEQVARLNQQVAALRGQLADLQAVLDEAKARDTEA 227 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 +++ + N L ++ E+ ++ + A+ + L+ ++ + Sbjct: 228 KVQVEALGSQLNSALAQVAAEQKRRAALEEEARRKAEAEAKDLARYRSEFFGRMSQLLDG 287 Query: 221 RTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--------STEVISIRG 270 R G+ + + +F S+ PE + ++ E ++ + G Sbjct: 288 RAGVRVVGDRFVFSSEVLFQPGSADLSPEGQAQISRVAETFRELAAEIPPEIDWLLEVDG 347 Query: 271 HTDASPFRN--IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP- 326 TD +P +DNW LS RA S + L++ G + R+ +GF R A Sbjct: 348 FTDDTPLSGQGEFKDNWELSQARALSVVKYLIEAQGFAPKRL-AAAGFGEFRPVAAGKSP 406 Query: 327 -MNSANRRIDILVEDR 341 + NRRI++ + +R Sbjct: 407 EARAQNRRIELKLTER 422 >gi|291617923|ref|YP_003520665.1| YtxE [Pantoea ananatis LMG 20103] gi|291152953|gb|ADD77537.1| YtxE [Pantoea ananatis LMG 20103] gi|327394329|dbj|BAK11751.1| flagellar motor protein YtxE [Pantoea ananatis AJ13355] Length = 413 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 59/145 (40%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + S L + + + V ++++ + +F S+ V+Q++ E Sbjct: 259 NLKSFLKPEIDEGL---VAVRDEADQSVVTL---KGDGLFASGSTEVRGRYDAVIQRVAE 312 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + + + I + G++D P R+ N+ LSL RA S +L K R+ G Sbjct: 313 AMNNVSGKILVVGYSDNVPIRSARFASNYELSLARAQSVQTLLQKQLAKPSRVKA-EGRG 371 Query: 317 HHRLKIASDPM--NSANRRIDILVE 339 + + + NRR++I ++ Sbjct: 372 ETHPLVPNTSAENRARNRRVEITLQ 396 >gi|296329693|ref|ZP_06872178.1| flagellar motor protein MotB [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674090|ref|YP_003865762.1| motility protein B; MotB component of the stator flagellum complex [Bacillus subtilis subsp. spizizenii str. W23] gi|296153191|gb|EFG94055.1| flagellar motor protein MotB [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412334|gb|ADM37453.1| motility protein B; MotB component of the stator flagellum complex [Bacillus subtilis subsp. spizizenii str. W23] Length = 261 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 7/198 (3%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 T + + +S +E ++ ++ ++L S + Sbjct: 59 TGGTGVMDYSSVTPPENESDGIDEVEKDKEEKEKNKKEKEKAADQKELENVKSQVEKFIK 118 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVI 266 + + + T G+LI+I D FD + E + + ++I +L + I Sbjct: 119 DKKLEHQLETKMTSEGLLITIKDS---IFFDSGKATIRKEDVPLAKEISNLLVINPPRNI 175 Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 I GHTD P +N NW LS+ RA + +L+++ + ++ G+ ++ ++ Sbjct: 176 IISGHTDNMPIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGYGEYKPVASNK 235 Query: 326 PMNSA--NRRIDILVEDR 341 NRR+++L+ R Sbjct: 236 TAEGRSKNRRVEVLILPR 253 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +KK + + SW + YAD +T+L+A F+V++ ++ D + + + FN Sbjct: 1 MARKKKKKHEDEHVDESWLVPYADILTLLLALFIVLYASSSIDAAKFQMLSKSFNEVF-- 58 Query: 76 LMTASKGIFDEQNPPERSSQNKI 98 T G+ D + +++ Sbjct: 59 --TGGTGVMDYSSVTPPENESDG 79 >gi|293604168|ref|ZP_06686576.1| outer membrane protein A [Achromobacter piechaudii ATCC 43553] gi|292817393|gb|EFF76466.1| outer membrane protein A [Achromobacter piechaudii ATCC 43553] Length = 193 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L ++ + I GHTD+ N +LS RA S Sbjct: 87 FFDFDKSTLKPEGRQLLDQVAQQARGIELETIIAVGHTDSI---GTEAYNQKLSERRAAS 143 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+ G+ +RI G ++ + NRR++I + + Sbjct: 144 VKTYLVSKGIDPNRIYT-EGKGELNPIASNKTKEGRAQNRRVEIEIVGSR 192 >gi|21674175|ref|NP_662240.1| OmpA family protein [Chlorobium tepidum TLS] gi|21647337|gb|AAM72582.1| OmpA family protein [Chlorobium tepidum TLS] Length = 231 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 57/150 (38%), Gaps = 19/150 (12%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + A +I + G + + +G+ +F S+ + Sbjct: 81 MDKQADEIRQEVQGAKVERVGEGIRVVF------------DTGLLFSTDSATLNANSRYN 128 Query: 252 LQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 ++K+ +L + + GHTD + N LS RA S +L GVS R++ Sbjct: 129 IEKLARILNRYNDTNVVIEGHTDNT---GTEASNQILSERRAESVATLLRTYGVSGRRLT 185 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILV 338 I G+ R ++ NRR+++L+ Sbjct: 186 AI-GYGETRPVATNETEAGRRLNRRVEVLI 214 >gi|19703598|ref|NP_603160.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713702|gb|AAL94459.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 157 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 5/132 (3%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 K V + ++I+ + FD S P+ +L I E + + I+I GHT Sbjct: 14 KNVDILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYDLLNNIKEFVEQNNYEITIVGHT 73 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330 D+ N++LS RA S L++ G+SEDRI I + + + Sbjct: 74 DSI---GSNAYNFKLSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQ 130 Query: 331 NRRIDILVEDRQ 342 NRR++ + R+ Sbjct: 131 NRRVEFKLVQRE 142 >gi|167583745|ref|ZP_02376133.1| hypothetical protein BuboB_00307 [Burkholderia ubonensis Bu] Length = 405 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 7/142 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + V +I + R +F ++ + + VL ++ + L Sbjct: 254 RIAKFLEPEIAAGLVSVRDDADRSVIVL---RGDGLFQSGATSVIDRYLPVLARVADALN 310 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G+TD +P NW LS +RA S +L +R+ G Sbjct: 311 KVPGNVRVSGYTDDTPVHTARFASNWDLSRERAESVRSLLAARLDRPERL-AAQGRGTLD 369 Query: 320 LKIASDP--MNSANRRIDILVE 339 +D + NRR++I + Sbjct: 370 PVAPNDTPANRARNRRVEITLL 391 >gi|307728928|ref|YP_003906152.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003] gi|307583463|gb|ADN56861.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003] Length = 217 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 ++ FD +S P VL ++ + L + E + + GHTD++ N LS++ Sbjct: 103 PSSVTFDTNSYAIKPSFAPVLDQLTQTLQQNPEVIAQVVGHTDST---GQPAYNQTLSVN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 RA S L + GV+ R+S G ++ ++ +ANRR++I + Sbjct: 160 RAQSVVSFLEQRGVAAQRLSA-QGMGQNQPIADNNTEAGRAANRRVEIYLRA 210 >gi|255067633|ref|ZP_05319488.1| membrane protein, OmpA family [Neisseria sicca ATCC 29256] gi|255048107|gb|EET43571.1| membrane protein, OmpA family [Neisseria sicca ATCC 29256] Length = 546 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 11/145 (7%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I + + D + ++I++ + +F+ L + Sbjct: 403 YIPKLKALMPKDPPPPKPIKPEPVKPVVITL---DSLALFETGQFELKNNANKALIGALK 459 Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGF 315 + + + GHTD N +LS RA S L + S V E R ++ G Sbjct: 460 AIESHPDTRILVEGHTDNV---GNPVSNQQLSEKRAQSVKDWLVISSNVPESRF-EVKGL 515 Query: 316 AHHRLKIASDPMN--SANRRIDILV 338 + + + NRR++I++ Sbjct: 516 GDTKPIADNQTEEGKAKNRRVEIIL 540 >gi|258405399|ref|YP_003198141.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257797626|gb|ACV68563.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692] Length = 227 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 10/144 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L + IL + D + +FD S+ P + L + Sbjct: 77 AYMDRQEQELRNALAQERAASVRREQDILRATFD--SNVLFDFDSARVKPGGVSELNRAA 134 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 V + I + GHTDA N LS RA + VL++ GV R+S + G+ Sbjct: 135 SVFNRYPQTRIRVEGHTDA---SGSEEYNMDLSRRRAQAVKDVLVQQGVDPRRVSTV-GY 190 Query: 316 AHHRLKIASDPMNSANRRIDILVE 339 + +SDP +ANRR+++++E Sbjct: 191 GETQPV-SSDP--AANRRVEVVIE 211 >gi|16759268|ref|NP_454885.1| hypothetical protein STY0305 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142957|ref|NP_806299.1| hypothetical protein t2581 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052080|ref|ZP_03344958.1| hypothetical protein Salmoneentericaenterica_03522 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428430|ref|ZP_03361180.1| hypothetical protein SentesTyphi_24568 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|289805848|ref|ZP_06536477.1| hypothetical protein Salmonellaentericaenterica_15952 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|25513281|pir||AI0536 probable membrane protein STY0305 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501559|emb|CAD08737.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138589|gb|AAO70159.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|329805048|gb|AEC05360.1| putative membrane protein [Salmonella enterica] Length = 433 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + + R MF V+ K +A Sbjct: 300 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 356 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD+ P + N LS RA +L GV R+ I G + Sbjct: 357 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 415 Query: 325 DP--MNSANRRIDILVED 340 + NRR++ILV + Sbjct: 416 GSKAGRAKNRRVEILVVE 433 >gi|224417733|ref|ZP_03655739.1| CADF precursor [Helicobacter canadensis MIT 98-5491] gi|253827077|ref|ZP_04869962.1| outer membrane protein OprF [Helicobacter canadensis MIT 98-5491] gi|313141275|ref|ZP_07803468.1| cadf [Helicobacter canadensis MIT 98-5491] gi|253510483|gb|EES89142.1| outer membrane protein OprF [Helicobacter canadensis MIT 98-5491] gi|313130306|gb|EFR47923.1| cadf [Helicobacter canadensis MIT 98-5491] Length = 306 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F S++ P +Q + + + + ++ GHTD++ A N +LS RA S Sbjct: 202 FPTDSAVVDPVYYPEIQDFAKYMDQNPDKTAVINGHTDST---GSAAYNQKLSEKRAQSV 258 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 ++K G+S +R+ G+ + ++ NRR++ Sbjct: 259 KNEIVKQGISSERLEA-KGYGEEKPIASNKTREGRQKNRRVE 299 >gi|163737113|ref|ZP_02144531.1| OmpA/MotB [Phaeobacter gallaeciensis BS107] gi|161389717|gb|EDQ14068.1| OmpA/MotB [Phaeobacter gallaeciensis BS107] Length = 219 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 10/205 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + ++ K ++ L + A+ + Sbjct: 17 GLTACTDPATIGTPGSKTQNGALIGGLIGAGVGAAANDSDRGLGAVTGALVGAAAGSVIG 76 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 ++ + L G+ T +++S+ + F S+ P L K+ Sbjct: 77 NQLDAQERELRQSISNDGISIVNTGDRLIVSLPNDLT---FATDSAAVSPAVRSDLNKVA 133 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L + + GHTD+ A N LS RA + + GV +R+ +I G Sbjct: 134 SSLVRYPNSQVQVIGHTDSD---GDAGYNQGLSERRANAVADQIQAGGVPYNRV-QIIGR 189 Query: 316 AHHRLKIASDPMN--SANRRIDILV 338 + ++ + NRR++I+V Sbjct: 190 GESQPVASNLTAEGKARNRRVEIVV 214 >gi|300312990|ref|YP_003777082.1| signal peptide protein [Herbaspirillum seropedicae SmR1] gi|124483422|emb|CAM32584.1| signal peptide protein [Herbaspirillum seropedicae] gi|300075775|gb|ADJ65174.1| signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 203 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD + P L ++ L + I GHTD+ N +LS+ RA Sbjct: 95 DAFFDFDKATLKPAGKAKLDELVGNLKAINLEVIIAVGHTDSI---GSVAYNQKLSVRRA 151 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 S L+ GV +R+ G + + + NRR++I V + Sbjct: 152 ESVKAYLVSKGVEANRVYT-EGKGKSQPVADNKTAAGRAKNRRVEIEVVGTR 202 >gi|77919760|ref|YP_357575.1| outer membrane protein [Pelobacter carbinolicus DSM 2380] gi|77545843|gb|ABA89405.1| outer membrane protein [Pelobacter carbinolicus DSM 2380] Length = 224 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 11/151 (7%) Query: 196 AKKISSTLSGLVADNIV-KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 A + + +G + + ++ +FD +S LQ+ Sbjct: 73 ANYMEKQEQAMRQQLAGVEGASIQRDAEVLAVTFKSD---VLFDVNSYSVKSGGYDELQR 129 Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + VL + + I I GHTD++ + N +LS RA + VL+ GV+ R+ + Sbjct: 130 VAGVLNNYPQTSIQIAGHTDST---GSEQYNMQLSRQRAEAVKNVLVGYGVAPARLMTV- 185 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 G+ + ++ NRR+ I + Q Sbjct: 186 GYGESKPIASNANEAGRQINRRVAITITPNQ 216 >gi|167899688|ref|ZP_02487089.1| hypothetical protein Bpse7_38555 [Burkholderia pseudomallei 7894] Length = 407 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + V +I + R +F S+ + + VL ++ + L Sbjct: 255 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 311 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G+TD +P NW LS +RA + ++ +RI+ G Sbjct: 312 RVQGNVRVSGYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITA-EGRGTLD 370 Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343 +D + NRR++I + G Sbjct: 371 PVAPNDSPANRARNRRVEITLMLAPG 396 >gi|110638581|ref|YP_678790.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110281262|gb|ABG59448.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 694 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + N FD S E+ L + E++ + I GHTD +N LS Sbjct: 585 RLNNLFFDTGKSDLRKESYAELNRTVELMKLYLTMTIEISGHTDNV---GGDAENQTLSE 641 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +RA + L+ G+ R+ G+ + +D + NRR+D + Sbjct: 642 NRAKAVVNYLVSHGIDASRVQS-KGYGKTKPVSTNDTDHGRQLNRRVDFTI 691 >gi|168232215|ref|ZP_02657273.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168240017|ref|ZP_02664949.1| SciP protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448829|ref|YP_002044265.1| hypothetical protein SeHA_C0320 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468900|ref|ZP_03074884.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194407133|gb|ACF67352.1| SciP protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455264|gb|EDX44103.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333484|gb|EDZ20248.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339891|gb|EDZ26655.1| SciP protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 434 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + + R MF V+ K +A Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD+ P + N LS RA +L GV R+ I G + Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416 Query: 325 DP--MNSANRRIDILVED 340 + NRR++ILV + Sbjct: 417 GSKAGRAKNRRVEILVVE 434 >gi|16763665|ref|NP_459280.1| hypothetical protein STM0282 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414595|ref|YP_151670.1| hypothetical protein SPA2482 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|168238628|ref|ZP_02663686.1| SciP protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168261319|ref|ZP_02683292.1| SciP protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465340|ref|ZP_02699222.1| SciP protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819144|ref|ZP_02831144.1| SciP protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194736479|ref|YP_002113300.1| hypothetical protein SeSA_A0314 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197262114|ref|ZP_03162188.1| SciP protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363525|ref|YP_002143162.1| hypothetical protein SSPA2317 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|238913699|ref|ZP_04657536.1| hypothetical protein SentesTe_21562 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|15130931|emb|CAC48213.1| SciP protein [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16418782|gb|AAL19239.1| putative outer membrane protein, OmpA family [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128852|gb|AAV78358.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194711981|gb|ACF91202.1| SciP protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631766|gb|EDX50286.1| SciP protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095002|emb|CAR60547.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197240369|gb|EDY22989.1| SciP protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288542|gb|EDY27919.1| SciP protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|205344023|gb|EDZ30787.1| SciP protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350071|gb|EDZ36702.1| SciP protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261245507|emb|CBG23297.1| putative type VI system protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267991971|gb|ACY86856.1| hypothetical protein STM14_0330 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156902|emb|CBW16378.1| putative membrane protein (SPI-6 associated) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911246|dbj|BAJ35220.1| hypothetical protein STMDT12_C02770 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084532|emb|CBY94324.1| Uncharacterized 24.6 kDa protein in ccpA 3'region ORF2 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224938|gb|EFX49999.1| Outer membrane protein ImpK/VasF, OmpA/MotB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323128597|gb|ADX16027.1| Putative outer membrane protein, OmpA family [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332987228|gb|AEF06211.1| hypothetical protein STMUK_0285 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 434 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + + R MF V+ K +A Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD+ P + N LS RA +L GV R+ I G + Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416 Query: 325 DP--MNSANRRIDILVED 340 + NRR++ILV + Sbjct: 417 GSKAGRAKNRRVEILVVE 434 >gi|84503479|ref|ZP_01001534.1| OmpA family protein [Oceanicola batsensis HTCC2597] gi|84388157|gb|EAQ01110.1| OmpA family protein [Oceanicola batsensis HTCC2597] Length = 226 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 10/139 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + V T +++++ +F S+ P+ L + L Sbjct: 92 EAALRSELGSNVQIVNTGDRLVVTMPQD---ILFATDSASLRPDLTTDLVTVARSLNEYP 148 Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GHTD + A N +LS RA + VL+ SGVS RI G + + Sbjct: 149 RTTVQVVGHTDNT---GDAAYNQQLSARRASAVANVLINSGVSAGRIQSF-GRGEDQPRA 204 Query: 323 ASDPMNSA--NRRIDILVE 339 + NRR+DI++ Sbjct: 205 TNLTPEGRQLNRRVDIVIL 223 >gi|254302656|ref|ZP_04970014.1| hypothetical protein FNP_0283 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322848|gb|EDK88098.1| hypothetical protein FNP_0283 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 157 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 5/132 (3%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 K + + ++I+ FD S PE +L+ I E + + I+I GHT Sbjct: 14 KNIDILNSEAPKEMTIVLDERALNFDFDKSNVKPEYYDLLKNIKEFVEQNNYEITIVGHT 73 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330 D+ N++LS RA S L++ G++EDRI I + ++ + Sbjct: 74 DSI---GSNAYNFKLSRRRAESVKAKLLEFGLTEDRIVGIEAMGEEQPIATNETKEGRAQ 130 Query: 331 NRRIDILVEDRQ 342 NRR++ + R+ Sbjct: 131 NRRVEFKLVQRE 142 >gi|170720793|ref|YP_001748481.1| OmpF family protein [Pseudomonas putida W619] gi|169758796|gb|ACA72112.1| OmpF family protein [Pseudomonas putida W619] Length = 345 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 52/131 (39%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272 V + + ++ FD S+ P + ++ + + + + ++ GHT Sbjct: 216 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 275 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + +VL + GV R+ + G+ R + + Sbjct: 276 DSV---GPDAYNQKLSERRANAVKEVLTQQYGVESTRVDSV-GYGETRPVADNATEDGRA 331 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 332 VNRRVEAQVEA 342 >gi|311104908|ref|YP_003977761.1| outer membrane protein A [Achromobacter xylosoxidans A8] gi|310759597|gb|ADP15046.1| outer membrane protein A [Achromobacter xylosoxidans A8] Length = 193 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L ++ + I GHTD+ N +LS RA S Sbjct: 87 FFDFDKSTLKPEGRQLLDQVAQQARGIDLETIIAVGHTDSI---GTEAYNQKLSERRAAS 143 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+ G+ +RI G ++ + NRR++I + + Sbjct: 144 VKTYLVSKGIDPNRIYT-EGKGELNPIASNKTKEGRAQNRRVEIEIVGSR 192 >gi|238927470|ref|ZP_04659230.1| flagellar motor protein B [Selenomonas flueggei ATCC 43531] gi|238884752|gb|EEQ48390.1| flagellar motor protein B [Selenomonas flueggei ATCC 43531] Length = 308 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 82/210 (39%), Gaps = 9/210 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 SQ +L + ++ + + K QDL+ Sbjct: 40 SQTDASKMQALAQAFTAAFNMGGPSFFSGMGPSTAPSPPTMTNGANTADAAYMKENQDLS 99 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + +N+ V E T G+++ + ++ +F S++ + ++ I Sbjct: 100 EAQKKLDQYIKDNNLQDQVSTELTEEGLMVRLKEK---ALFSSGSAVLQGDAEKIVPVIA 156 Query: 257 EVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ--VLMKSGVSEDRISKIS 313 VLA E ++I GHTD P NW LS RA S + + ++ ++ R S + Sbjct: 157 GVLASLPERVTISGHTDNVPISTAQYPSNWELSSARAVSLMRGVMAVQPSLNPARFSAL- 215 Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341 G++ +R ++D + NRR+++ + Sbjct: 216 GYSEYRPIASNDTEEGRAQNRRVEVFIARS 245 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 42/126 (33%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +KK +W + Y+D MT+L+A F+ ++ ++ TD +A+ Q F Sbjct: 1 MARKKRGKPHEEELNEAWLLPYSDLMTLLLALFIALFAMSQTDASKMQALAQAFTAAFNM 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + P + + D K + DL + + + Sbjct: 61 GGPSFFSGMGPSTAPSPPTMTNGANTADAAYMKENQDLSEAQKKLDQYIKDNNLQDQVST 120 Query: 136 NSQQSE 141 + Sbjct: 121 ELTEEG 126 >gi|28869499|ref|NP_792118.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato str. DC3000] gi|213968086|ref|ZP_03396231.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato T1] gi|301384938|ref|ZP_07233356.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato Max13] gi|302061987|ref|ZP_07253528.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato K40] gi|28852741|gb|AAO55813.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato str. DC3000] gi|213927066|gb|EEB60616.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato T1] gi|330875557|gb|EGH09706.1| outer membrane porin OprF [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967341|gb|EGH67601.1| outer membrane porin OprF [Pseudomonas syringae pv. actinidiae str. M302091] gi|331016208|gb|EGH96264.1| outer membrane porin OprF [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 344 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 8/197 (4%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 R + + D E + + SK+ A + + + Sbjct: 149 ARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V + + ++ FD + S+ P ++ ++ + + + + + Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFNKSVVKPNSMGDIKNLADFMQQYPQTTT 268 Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 + GHTD+ N +LS RA + QVL+ GV R++ + G+ R + Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESRPVADNA 324 Query: 326 PMNSA--NRRIDILVED 340 NRR++ VE Sbjct: 325 TDAGRAVNRRVEAEVEA 341 >gi|4530365|gb|AAD22005.1| major outer membrane protein [Pseudomonas fluorescens] Length = 343 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272 V + + ++ FD S+ P + ++ + + + ++ GHT Sbjct: 214 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHT 273 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + QVL GV R+ + G+ R + Sbjct: 274 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVADNATEAGRA 329 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 330 VNRRVEAQVEA 340 >gi|221201698|ref|ZP_03574736.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] gi|221207227|ref|ZP_03580237.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221172815|gb|EEE05252.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221178514|gb|EEE10923.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] Length = 310 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 88/291 (30%), Gaps = 20/291 (6%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV----DLKIGSTN 119 N G + G P + + + + + +T Sbjct: 22 GAAYAQNAGGATVTPVGNGTVAASALPANAGAGSASAAASGTLVRGTAGTLAPPPANATP 81 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + + + Q ++ + +T S N ++ Sbjct: 82 GQVVVGGKVPDEATKAAVLQKLRDTYGAANVVDQIEVGDVATPPNWSANVQKLLGAQLKQ 141 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ------- 231 K +++ + + +A ++ + T R G+ +S +Q Sbjct: 142 ISKGQLKINGTQIEMKGEVHNEAQRQQIASDMANTLNPTYTIRNGLRVSASEQGLLDQTL 201 Query: 232 -RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 T F+ S+ P+ +L ++ LA I GHTD N LS Sbjct: 202 ANRTIEFETGSATLTPQGKQILDQMAAALAKLQNRTVDIIGHTDN---SGNRTSNIALSQ 258 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA + L+ G+S +++ +G + +D + NRRI+ V Sbjct: 259 ARADAVKGYLITKGISPQQMTT-TGVGPDQPIAPNDTADGRARNRRIEFRV 308 >gi|149918478|ref|ZP_01906968.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1] gi|149820778|gb|EDM80188.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1] Length = 258 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 81/240 (33%), Gaps = 14/240 (5%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 D + KQ + E S S SE + ++ + + + + + + Sbjct: 21 DAEAQEALAAKQAEVTELQKELDSKSALSEQHEAAIAELKAEQEAHVATQEKATKLAAKV 80 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + K+ K L + + LV + + +++ + D+ Sbjct: 81 EDLESKAGSLEGELKKKDKALAAVKALQETLSKSLVEEIETGDIRVSERHGYLVVDVSDK 140 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIA-----RDN 284 +F + +L ++ E L V + GHTD P ++ N Sbjct: 141 ---VLFATGEATLSERGKKLLGRLAESLLTLPKDSVFQVGGHTDNQPIKSEEVLANFPTN 197 Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 W LS RA + + L + V R+ GF+ R ++ + NRRI+I + Sbjct: 198 WELSASRATNVVRFLEEECSVPGARLVAA-GFSEFRPVSSNKKAKGRAKNRRIEIALLPP 256 >gi|156936052|ref|YP_001439968.1| hypothetical protein ESA_03946 [Cronobacter sakazakii ATCC BAA-894] gi|156534306|gb|ABU79132.1| hypothetical protein ESA_03946 [Cronobacter sakazakii ATCC BAA-894] Length = 411 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 49/111 (44%), Gaps = 4/111 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290 + +F +S++ V+ ++ + + + + I + G++D P R+ N+ LSL Sbjct: 285 KGDGLFASASTVVRGRYEPVIDRVAQAMNNVSGKILVVGYSDNVPIRSARFASNYELSLA 344 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 RA S ++L +R+ G ++ + NRR++I + Sbjct: 345 RAESVQKMLQAHLADPNRVKA-QGRGEMDPIAPNNTPENRARNRRVEITLL 394 >gi|120436663|ref|YP_862349.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] gi|117578813|emb|CAL67282.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] Length = 281 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 91/241 (37%), Gaps = 12/241 (4%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 N ++ K T + ++ N + KN ++ ++ L K Sbjct: 25 NELETKQRETQDQLNTATVKLNSCLDEKESLNGQIKNLNNTNAALLNNVGDLATLSKKEA 84 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVADNIVKGVLFETTRTGIL 225 + L + ++ + + + + ++L G + D + + + + Sbjct: 85 ENMERSLESIKEKDLAIRSMQDAMNKKDSVTLALVTSLKGALGDLSDEDIEINVEKGVVY 144 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARD 283 +SI D+ +FD P VL K+ V+ + + + GHTD D Sbjct: 145 VSISDKL---LFDSGRYNIKPRAKEVLGKVATVVKNKPNIEFMVEGHTDDQAISTSMFED 201 Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 NW LS+ RA S +VL G+ R++ G +++ +++ + NRR I+V Sbjct: 202 NWDLSVKRATSVVRVLQDDFGIEPARMTAA-GRSYYIPVASNETAEGRAKNRRTRIVVLP 260 Query: 341 R 341 + Sbjct: 261 K 261 >gi|62178845|ref|YP_215262.1| hypothetical protein SC0275 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62126478|gb|AAX64181.1| putative outer membrane protein, OmpA family [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713295|gb|EFZ04866.1| Type IV / VI secretion system, DotU [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 434 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + + R MF V+ K +A Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGGAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD+ P + N LS RA +L GV R+ I G + Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416 Query: 325 DP--MNSANRRIDILVED 340 + NRR++ILV + Sbjct: 417 GSKAGRAKNRRVEILVVE 434 >gi|302185388|ref|ZP_07262061.1| flagellar motor protein MotD [Pseudomonas syringae pv. syringae 642] Length = 296 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 8/194 (4%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 57 NDTERTMKPIPIGEQRPVSIKPAEPLVKESEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + +F ++P + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELNSSM---LFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP-- 326 TD P NW LS R+ S ++L GV+ R++ + G+ + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAAMDGVNPARLASV-GYGEFQPIAPNTSTA 232 Query: 327 MNSANRRIDILVED 340 + NRR+ +++ Sbjct: 233 GRAKNRRVVLVISR 246 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 4/124 (3%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +++ + + W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 1 MARRRQVEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 K I + P S + + E ++ + + Q + + L Sbjct: 59 TERTMKPIPIGEQRP--VSIKPAEPLVKESEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 136 NSQQ 139 S Q Sbjct: 117 KSDQ 120 >gi|197117412|ref|YP_002137839.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem] gi|197086772|gb|ACH38043.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem] Length = 228 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 6/113 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +FD PE L + L S I+I GHTD++ N LS R Sbjct: 110 PSGILFDLGKDALKPEAKDALSRAAGTLKDSQTTITIEGHTDST---GSNAVNQPLSERR 166 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 A L+ GV +++ I G+ R + +D + NRR+ I + + Sbjct: 167 ANRVRDYLVSQGVPGAKMAAI-GYGSSRPAVPNDSDANRALNRRVQIELTPNE 218 >gi|167840769|ref|ZP_02467453.1| hypothetical protein Bpse38_29109 [Burkholderia thailandensis MSMB43] Length = 405 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + V +I + R +F S+ + + VL ++ + L Sbjct: 253 RVAKFLEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRVADALN 309 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G+TD +P + NW LS +RA + ++ DRI G Sbjct: 310 QVPGSVRVSGYTDDTPVHSARFASNWDLSRERAEAVRGLIAARLDRPDRI-AAEGRGTLD 368 Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343 +D + NRR++I + G Sbjct: 369 PVAPNDSPANRARNRRVEITLMLAPG 394 >gi|4580975|gb|AAD24562.1|AF117970_1 OprF [Pseudomonas viridiflava] Length = 344 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 68/197 (34%), Gaps = 8/197 (4%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 R + + + E + + SK+ A + + + Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-I 266 + V + + ++ FD S+ P + ++ + + + + Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPSSYGDIKNLADFMQQYPQTST 268 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 ++ GHTD+ N +LS RA + QVL+ GV R++ + G+ R + Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESRPVADNA 324 Query: 326 PM--NSANRRIDILVED 340 + NRR++ VE Sbjct: 325 TESGRAVNRRVEAEVEA 341 >gi|330808432|ref|YP_004352894.1| Outer membrane porin F [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376540|gb|AEA67890.1| Outer membrane porin F [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 344 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272 V + + ++ FD S+ P + ++ + + + ++ GHT Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHT 274 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + QVL GV R+ + G+ R + Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVADNATEAGRA 330 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 331 VNRRVEAQVEA 341 >gi|110633615|ref|YP_673823.1| OmpA/MotB [Mesorhizobium sp. BNC1] gi|110284599|gb|ABG62658.1| OmpA/MotB [Chelativorans sp. BNC1] Length = 217 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L A GV I++++ F S+ P L + Sbjct: 75 YMDQQEAQLRAQLQGTGVSVTRQGDYIILNMPSNIT---FATDSADIQPAFYQTLNSVAL 131 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + + + GHTD++ + N +LS RA S L+ G R + G Sbjct: 132 VLKRYNQTLVDVYGHTDST---GSLQHNMQLSQRRAASVADYLIAQGTDSRRF-AVIGQG 187 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 + ++ + NRR++I + Sbjct: 188 PSQPIASNATPEGRAQNRRVEIRL 211 >gi|289673277|ref|ZP_06494167.1| thrombospondin type 3 repeat-containing OmpA/MotB protein [Pseudomonas syringae pv. syringae FF5] gi|330977632|gb|EGH77539.1| thrombospondin type 3 repeat-containing OmpA/MotB protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 344 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 8/197 (4%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 R + + + E + + SK+ A + + + Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V + + ++ FD S+ P + ++ + + + + + Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTT 268 Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 + GHTD+ N +LS RA + QVL+ GV R++ + G+ + + Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESKPVADNA 324 Query: 326 PMNSA--NRRIDILVED 340 NRR++ VE Sbjct: 325 TEAGRAVNRRVEAEVEA 341 >gi|189423758|ref|YP_001950935.1| OmpA/MotB domain protein [Geobacter lovleyi SZ] gi|189420017|gb|ACD94415.1| OmpA/MotB domain protein [Geobacter lovleyi SZ] Length = 443 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SI + L+ +G+ L I GHTD + N LS RA + Sbjct: 306 FDTGKSIIKKQYYDELKVVGDGLNEQKNLKGVIEGHTDNV---GSDKSNLALSQRRANAV 362 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 ++K+ + R+ G+ + + NRRI+ + E+ Sbjct: 363 RDYIVKNFKIDRKRL-AAKGYGESKPIADNATAEGREQNRRIEAVFEE 409 >gi|288942206|ref|YP_003444446.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM 180] gi|288897578|gb|ADC63414.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180] Length = 225 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 9/148 (6%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + ++ L + + + L ++ F+ S P L+K Sbjct: 79 MEEQQRDFERQLAPEIASGVIRVQKLPDHQL--LVGMTGATAFEVDSDRIQPGFYSTLEK 136 Query: 255 IGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 I ++ +++ GHTD++ A N LS RA S L +SGV RI Sbjct: 137 ISAIVRKYGKTQLAVSGHTDST---GAAAYNQTLSERRAASVGYYLERSGVLPQRIYSA- 192 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339 G+ ++ ++ + NRR+DIL+ Sbjct: 193 GYGMNQPIASNATEDGRRLNRRVDILIM 220 >gi|217415925|dbj|BAH03186.1| putative OmpA-family membrane protein [Edwardsiella tarda] Length = 576 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 6/137 (4%) Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 ++ + ++ + I+ + +FD S+ + L + Sbjct: 415 PPPFESEAQPTPKRVSKPKPVPKIVRLDSMSLFDSGKSVLKTGSTKWLVNSLVGIKAKPG 474 Query: 265 V-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I + GHTD + + N LSL RA + + +G + + G+ R Sbjct: 475 WLIVVSGHTDNT---GSPQLNQMLSLKRAEAVRDWMRDTGDVPESCFAVQGYGASRPVAT 531 Query: 324 SDP--MNSANRRIDILV 338 +D + NRR++I + Sbjct: 532 NDTPEGRALNRRVEISL 548 >gi|167993292|ref|ZP_02574387.1| SciP protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205328610|gb|EDZ15374.1| SciP protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] Length = 434 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + + R MF V+ K +A Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD+ P + N LS RA +L GV R+ I G + Sbjct: 358 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416 Query: 325 DP--MNSANRRIDILVED 340 + NRR++ILV + Sbjct: 417 GSKAGRAKNRRVEILVVE 434 >gi|332666790|ref|YP_004449578.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332335604|gb|AEE52705.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 495 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 41/111 (36%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q + F S + L + E + I + GHTD N LS Sbjct: 386 QFSYVTFATGSEKLTGVSRYELDNLVEAMKEKKGLKIQLAGHTDDI---GEDAQNLALSQ 442 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + + L+ GV R+S GF + A+D + NRR + V Sbjct: 443 KRADAVMKYLVSKGVDASRLSA-KGFGESQPVAANDSDDNRAQNRRTEFRV 492 >gi|330875706|gb|EGH09855.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967020|gb|EGH67280.1| ompA family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 271 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 98/248 (39%), Gaps = 12/248 (4%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 + + + S D + + ++ I + ++E + L ++ Sbjct: 26 QDSAQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVSHYAYL 85 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218 S+ + + N L K+ +++ +L K++S ++ + + Sbjct: 86 SSRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATT 145 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 146 QTDRGLVMTLGD----VLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 +N LS DRA + VL GV E RI ++ G+ A+ + NRR++ Sbjct: 200 -GDREENLTLSKDRAQAVADVLTDLGVDEKRI-QVEGYGQQFPVDANASERGRAQNRRVE 257 Query: 336 ILVEDRQG 343 I+ D +G Sbjct: 258 IVFSDEKG 265 >gi|220935429|ref|YP_002514328.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996739|gb|ACL73341.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] Length = 427 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 95/299 (31%), Gaps = 21/299 (7%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 + ++L + + E + S+ D S ++ Sbjct: 127 LQEDIDALRRLREDLESQVGRLASELEESQASAGQLRDRSRALEARLAETQETTLLAQRE 186 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + + ++ + ++ + + + ++ L Sbjct: 187 IEAREIRIQDLAAGIEERDRALVEERSLTADAQARVDALRRQMQDLEQQLARLNETLRAR 246 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP------ 235 + ++ + DL ++++ L+ V + F +L + D + Sbjct: 247 EETIEAQQVEIADLGERLNLALAEEVRELSRYRSEFFGRLREVLSDVEDIQIVGDRFRFQ 306 Query: 236 ---MFDKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRNIAR-D 283 F+ +S+ PE L ++ + V+ + GHTD P R Sbjct: 307 SELFFETASADIGPEGRERLDRVARTIREIDARIPGDIGWVLMVEGHTDRRPIRTEQFPS 366 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340 NW LS RA S L+ GV+ R+ +GF + A + NRRI++ + Sbjct: 367 NWELSSARAQSIVNYLISRGVAPRRL-AAAGFGEYHPLDAGSTEAAFSRNRRIEMRLSS 424 >gi|194443139|ref|YP_002039516.1| hypothetical protein SNSL254_A0308 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194401802|gb|ACF62024.1| SciP protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 434 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + + R MF V+ K +A Sbjct: 301 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 357 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 ++I GHTD+ P + N LS RA +L GV R+ I G + Sbjct: 358 VTITGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADN 416 Query: 325 DP--MNSANRRIDILVED 340 + NRR++ILV + Sbjct: 417 GSKAGRAKNRRVEILVVE 434 >gi|66967954|gb|AAY59422.1| outer membrane protein A [Allochromatium vinosum] Length = 225 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 9/148 (6%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + ++ L + + + L ++ F+ S P L+K Sbjct: 79 MEEQQRDFERQLAPEIASGVIRVQKLPDHQL--LVGMTGATAFEVDSDRIRPGFYSTLEK 136 Query: 255 IGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 I ++ +++ GHTD++ A N LS RA S L +SGV RI Sbjct: 137 ISAIVRKYGKTQLAVSGHTDST---GAAAYNQTLSERRAASVGYYLERSGVLPQRIYSA- 192 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339 G+ ++ ++ + NRR+DIL+ Sbjct: 193 GYGMNQPIASNATEDGRRLNRRVDILIM 220 >gi|114332359|ref|YP_748581.1| OmpA/MotB domain-containing protein [Nitrosomonas eutropha C91] gi|114309373|gb|ABI60616.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91] Length = 220 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 10/151 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ-K 254 + + A ++ +T ++++I FD S+ P +L Sbjct: 73 KRMEEQKIQMENATAGTGVMVSQTADNRLMLNIPSD---ISFDTGSAQIKPGFRPILDSF 129 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 +L + ++I GHTD + N LS++RA S + L GV RI +I G Sbjct: 130 ATSLLNNPGTHVTIVGHTDNT---GSDAVNNPLSVNRAASTREYLAGRGVPFQRI-QIDG 185 Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQG 343 ++ +++ + NRR++I V + +G Sbjct: 186 RGSYQPVASNNTAAGRARNRRVEIYVSETRG 216 >gi|260885301|ref|ZP_05734718.2| lipoprotein PG3 [Prevotella tannerae ATCC 51259] gi|260852896|gb|EEX72765.1| lipoprotein PG3 [Prevotella tannerae ATCC 51259] Length = 234 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD-----NWRLSLD 290 +F + L + L + + + G+TD +R + N LS Sbjct: 110 LFQTGQDVLSSSARNDLATFAKNLTSDMD-LYVYGYTDNQGWRGASASESMNKNQVLSEQ 168 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 RA S L +G+S ++ ++ GF ++D NRR+++ V + Sbjct: 169 RANSVSSYLRSNGISSSQMKEVKGFGESNPVASNDSSTGREQNRRVEVYVMPSK 222 >gi|256829593|ref|YP_003158321.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256578769|gb|ACU89905.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028] Length = 376 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 9/103 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE L + + GHTD+ N +LS RA + Sbjct: 267 FDFDKSDIKPEYHQELADFASYMRQQQSFTVVEIAGHTDSV---GTDEYNQKLSERRAKA 323 Query: 295 AYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334 L+ + G+ + + G+ + +D + NRRI Sbjct: 324 VRDYLVNELGMDTN-LFSAVGYGESKPIATNDTDAGRAENRRI 365 >gi|326942295|gb|AEA18191.1| flagellar motor protein MotB [Bacillus thuringiensis serovar chinensis CT-43] Length = 262 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 64 GGTGNKEFLSDQKPNEEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 123 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 177 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 3/115 (2%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 + +W I Y+D +T+L A F+V++ +++ D K + F L + Sbjct: 14 HDEHIDETWLIPYSDMLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKE 70 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + + S++ K + + + + + L+ I N +Q Sbjct: 71 FLSDQKPNEEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 125 >gi|325953930|ref|YP_004237590.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] gi|323436548|gb|ADX67012.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] Length = 284 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 9/158 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 K + L +++ L+ ++ ++ + + + + IS+ D ++ S P Sbjct: 116 KSKSDSLNMVLTNNLTRSLSREEMRDIDVQVLKGVVYISLADNM---LYKSGSYEISPAA 172 Query: 249 IVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-GVS 305 L KI +++ + I G+TD P R+NW LS RA S Q L GV Sbjct: 173 GETLSKIAKIIKDYRDYDVLIEGNTDNVPINRPNIRNNWDLSALRASSVVQALQNQYGVD 232 Query: 306 EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 R++ G + + NRR I++ + Sbjct: 233 PKRLTAG-GRGEYNPVTTNATEEGKSKNRRTQIIITPK 269 >gi|311069471|ref|YP_003974394.1| flagellar motor protein MotS [Bacillus atrophaeus 1942] gi|310869988|gb|ADP33463.1| flagellar motor protein MotS [Bacillus atrophaeus 1942] Length = 209 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 70/188 (37%), Gaps = 11/188 (5%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 + + + ++ K+ R +L +K+++ + N+ + + Sbjct: 25 SAVESIQKEGSGIQPDNTSINTSDAAQKKQDNRQDELLQKVNTYIQKH---NLSAKMTAK 81 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 G+++ + + +FD + L + +L +I +L I + GHTD+ Sbjct: 82 RDERGVILVLQEA---VLFDTGEAAVLKDAETLLHQIAVLLQTMPNEIQVEGHTDSRNIS 138 Query: 279 N-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334 NW LS RA Q + R + G+A + + NRR+ Sbjct: 139 TYRYPSNWELSAARASGVIQYFTSKENLPSKRFIAV-GYADTMPVKDNKTADHMKENRRV 197 Query: 335 DILVEDRQ 342 +I+++ + Sbjct: 198 EIVIKKSK 205 Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 21/44 (47%) Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83 +T+++ FF++++ ++ D K+ + G + + I Sbjct: 1 MVTLILVFFILLFSMSQIDVQKFKSAVESIQKEGSGIQPDNTSI 44 >gi|218885922|ref|YP_002435243.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756876|gb|ACL07775.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 244 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 92/248 (37%), Gaps = 12/248 (4%) Query: 99 DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158 D+ ++ D + F++ S K +T + + + Sbjct: 1 MADDDDLDMESEADEPPQEWLATLADVSMLLLCFFILLFALSTIDKTKITETFDSVRTVF 60 Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 D E S + + L + L + + ++ ++ + L+ + I+ V F+ Sbjct: 61 GGKDKELSTSAVRSDESSALLESVRLQRQIIEAQRNTYSEMRTYLNKTGVEGIIGAV-FD 119 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPF 277 + I MF + P+ L+ + + + + I+IRG TD S Sbjct: 120 EGVITLRI-----PAEVMFAPGETDLSPQAERYLKPLADLFVRKKDQSINIRGFTDDSQP 174 Query: 278 R--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333 + RDNW LS RA S + +K+G+ R++ +G + + NRR Sbjct: 175 GQNSRFRDNWELSSLRAVSVLRYFLKAGIDSKRLTA-TGLGELDPLFPNTTEENRARNRR 233 Query: 334 IDILVEDR 341 ++ ++E R Sbjct: 234 VEFMLERR 241 >gi|146298460|ref|YP_001193051.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146152878|gb|ABQ03732.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 487 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 83/267 (31%), Gaps = 22/267 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 + G+ P+ +D S L ++ Sbjct: 229 KDDACPDVAGLKQFNGCPDTDGDGIVDASDACPNEFGLAALNGCPDRDGDGVADKDDACP 288 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ + C D++ K +EN P L +K + + Sbjct: 289 DVAGLAALKGCP-----DTDGDGIADKDDKCPTVAGPKENGGCPFLDADKDGVLDKDDDC 343 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + S+ V+ ++ + + I F ET L Sbjct: 344 PTVPGPASNRGCPEVSSQALEDLKVQARA------IYFNSGKATFKTG----DKETPARL 393 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 I E+L + SI GHTD + A+ N +LS DRA + L++ GV+ + + Sbjct: 394 DAIKEILKNYPNAKFSIEGHTDNT---GSAKINDKLSQDRANAVLNALVERGVNPENLEA 450 Query: 312 ISGFAHHRLKIASDPMN--SANRRIDI 336 GF + ++ + NRR +I Sbjct: 451 -KGFGSSQPVASNKTAAGKAQNRRTEI 476 >gi|83718191|ref|YP_438455.1| hypothetical protein BTH_II0253 [Burkholderia thailandensis E264] gi|167614920|ref|ZP_02383555.1| hypothetical protein BthaB_01465 [Burkholderia thailandensis Bt4] gi|257141504|ref|ZP_05589766.1| hypothetical protein BthaA_20174 [Burkholderia thailandensis E264] gi|83652016|gb|ABC36080.1| ompA family protein [Burkholderia thailandensis E264] Length = 437 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 7/141 (4%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V +I + R +F S+ + + VL +I + L Sbjct: 290 LEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRIADALNQVPGS 346 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + + G+TD +P NW LS +RA + ++ DRI+ G + Sbjct: 347 VRVSGYTDDTPVHTARFASNWDLSRERAEAVRGLIAARLDRPDRITA-EGRGTLDPVAPN 405 Query: 325 DP--MNSANRRIDILVEDRQG 343 D + NRR++I + G Sbjct: 406 DSPANRARNRRVEITLMLAPG 426 >gi|330959066|gb|EGH59326.1| OmpA/MotB [Pseudomonas syringae pv. maculicola str. ES4326] Length = 271 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 99/248 (39%), Gaps = 12/248 (4%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 + + + + D + + ++ I + ++E + L ++ Sbjct: 26 QDSGQALQQANADFQKVKEDTDVLRSAPKDVIRSGESLARAERLSSYLGSGADVSHYAYL 85 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218 S+ + + N L K+ +++ +L K++S ++ + + Sbjct: 86 SSRYSEIAREHSNLLLSQERLAKMDLERQRMQLALREAKLASAQQQGRWLEDQILSLATT 145 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 146 QTDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 ++N LS DRA + +LM G+ E RI ++ G+ + + NRR++ Sbjct: 200 -GDRQENLNLSKDRAQAVADMLMDLGIDEKRI-QVQGYGQQFPVDGNASERGRAQNRRVE 257 Query: 336 ILVEDRQG 343 I+ D +G Sbjct: 258 IVFSDEKG 265 >gi|229135343|ref|ZP_04264134.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196] gi|228648118|gb|EEL04162.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196] Length = 234 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E ++++ K L+ L KKI ++ Sbjct: 36 GGTGNKEFLSDQKPNEEKELSASSLEAEQAKKQAEDRAKEKKEMDELKALQKKIDQYINE 95 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 96 ---KQLSSSFQTKLTEKGLMLTILEN---VLFDSGKADVKLESLGIAKEMSNLLVSASPR 149 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + Q +L + ++ S I G+ +R Sbjct: 150 EITVSGHTDTVPIANAQFASNWELSTQRAVNFMQVLLQNKDLQPEKFSAI-GYGEYRSIA 208 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 209 PNDTPEGKAKNRRVEVFIL 227 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 3/100 (3%) Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 +T+L A F+V++ +++ D K + F L + + + Sbjct: 1 MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKEFLSDQKPNEEKELSA 57 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S++ K + + + + + L+ I N +Q Sbjct: 58 SSLEAEQAKKQAEDRAKEKKEMDELKALQKKIDQYINEKQ 97 >gi|189475078|gb|ACE00213.1| OmpA [Vibrio alginolyticus] Length = 320 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T FD +S+ PE+ L + L + + + G+TD A N ++S R Sbjct: 207 GTGSFDLNSTTLKPESAAKLDNLVAFLNEHPQANVEVVGYTDT---SGPAAYNLKVSEKR 263 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A S L++ G+ RI G + ++D NRR++++V Sbjct: 264 AESVANALVEKGIDSSRIQA-RGEGENNPIASNDTREGRQQNRRVEVVV 311 >gi|91225860|ref|ZP_01260829.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01] gi|269965437|ref|ZP_06179556.1| outer membrane protein OmpA [Vibrio alginolyticus 40B] gi|91189510|gb|EAS75786.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01] gi|269829916|gb|EEZ84146.1| outer membrane protein OmpA [Vibrio alginolyticus 40B] Length = 320 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T FD +S+ PE+ L + L + + + G+TD A N ++S R Sbjct: 207 GTGSFDLNSTTLKPESAAKLDNLVAFLNEHPQANVEVVGYTDT---SGPAAYNLKVSEKR 263 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A S L++ G+ RI G + ++D NRR++++V Sbjct: 264 AESVANALVEKGIDSSRIQA-RGEGENNPIASNDTREGRQQNRRVEVVV 311 >gi|4580967|gb|AAD24554.1|AF117962_1 OprF [Pseudomonas chlororaphis subsp. chlororaphis] Length = 325 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P + ++ + + + + + ++ GHTD+ N +LS RA + Sbjct: 219 FDFDKSVVKPNSYADIKNLADFMKQNPQTTTVVEGHTDSV---GPDAYNQKLSERRANAV 275 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 QVL GV R+ + G+ R + NRR++ VE Sbjct: 276 KQVLTSQYGVESSRVQSV-GYGESRPVADNATEAGRAVNRRVEAQVEA 322 >gi|209522383|ref|ZP_03270996.1| OmpA/MotB domain protein [Burkholderia sp. H160] gi|209497180|gb|EDZ97422.1| OmpA/MotB domain protein [Burkholderia sp. H160] Length = 150 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ FD SS P VL ++ + L + EV+ S+ GHTD++ + N LS++ Sbjct: 36 PSSVTFDTSSYTIKPSFAPVLDQLAQTLQQNPEVVASVVGHTDST---GSLQYNQTLSVN 92 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 RA S L + G++ R+S +G ++ ++ +ANRR++I + Sbjct: 93 RAESVTGYLTQRGIAPQRLSA-TGMGPNQPIADNNTEAGRAANRRVEIYLRA 143 >gi|66045239|ref|YP_235080.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] gi|63255946|gb|AAY37042.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] Length = 271 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 100/247 (40%), Gaps = 12/247 (4%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + S D + + ++ I + ++E + L ++ S Sbjct: 27 DSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYLS 86 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFET 219 + + + N L K+ +++ +L K++S ++ + + Sbjct: 87 SRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTE 146 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 147 TDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST--- 199 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 ++N +LS DRA + VLM G+ E RI + G+ A+ + NRR++I Sbjct: 200 GDRQENLKLSKDRAQAVADVLMDLGIDEKRIH-VEGYGQEFPVNANTSERGRAQNRRVEI 258 Query: 337 LVEDRQG 343 + D +G Sbjct: 259 VFSDEKG 265 >gi|226943639|ref|YP_002798712.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii DJ] gi|226718566|gb|ACO77737.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii DJ] Length = 270 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 81/248 (32%), Gaps = 14/248 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL-E 164 T + L+ + + LS + + SL R L D+ Sbjct: 21 ATSSPETLRALDEARAELLAIRTEPAVRLSAEKDLARAEESLARAERFSGYLGSEDDVLH 80 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL------FE 218 + + + A +R L+ ++ LS N + Sbjct: 81 YAYLSRRYGQIAREHGAQRQAAERLVELEKERDRLQLALSEARLLNAEQQGEWLEEQLLG 140 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277 T T ++ +FD + ++ L + V+ I G+TD+ Sbjct: 141 RTTTETERGLVMTLGDVLFDTGREELRSAATRTVVQVARFLRLNQRRVVRIEGYTDSQ-- 198 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + N LS RA S +L+ GV R+ +++G+ + + NRR++ Sbjct: 199 -GDDQLNLELSRGRAQSVKDMLVDLGVDAGRV-QVAGYGEAYPVAENASSQGRARNRRVE 256 Query: 336 ILVEDRQG 343 I+ D +G Sbjct: 257 IVFSDEEG 264 >gi|120613225|ref|YP_972903.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1] gi|120591689|gb|ABM35129.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1] Length = 296 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 73/196 (37%), Gaps = 11/196 (5%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 K + + ++ + + + + + + + + + Sbjct: 104 DADIKKAGADAERLRLTSEADRARMQAEANARSAQQAQLQAASAEQRAADNAARVRALEA 163 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269 ++ + + T G+L+++ D +F + + + L K+ L + I Sbjct: 164 QLRDIEAQQTERGLLVTLGD----VLFAFNKAELSAQAGPRLDKLANFLRQFPDRKLIIE 219 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327 GHTD+ N LS RA + L++ GV+ DRI+ G+ + Sbjct: 220 GHTDSV---GGDAYNQSLSERRAQAVQSALVQRGVAPDRITA-RGYGKTYPVADNSSPEG 275 Query: 328 NSANRRIDILVEDRQG 343 + NRR++I++ D +G Sbjct: 276 RAMNRRVEIVIADEKG 291 >gi|295134908|ref|YP_003585584.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda SM-A87] gi|294982923|gb|ADF53388.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda SM-A87] Length = 281 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 92/240 (38%), Gaps = 12/240 (5%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 ++ K T + ++ N S + +E K ++ ++ L K + Sbjct: 26 ELEAKQKETQDQLNTATVKLNACLESKDEMTERIKVLNNTNAALLNNVGDLATLSKKEAQ 85 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVADNIVKGVLFETTRTGILI 226 L + ++ + + + + ++L G + + + + + + Sbjct: 86 NLERSLESIKEKDLAIKSMRDAINKKDSVTLALVTSLKGAIGNMNDDDIEINVEKGVVYV 145 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDN 284 SI D+ +FD + VL K+ V+ + ++ + GHTD +DN Sbjct: 146 SISDKL---LFDSGRYNVTNQAREVLGKVATVIKNKPDIEFMVEGHTDDKSISTSMFQDN 202 Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 W LS+ RA S ++L GV R++ G +++ ++ + NRR I+V + Sbjct: 203 WDLSVKRATSVVRILQDEFGVDPKRMTAA-GRSYYMPVASNATAEGRAKNRRTRIVVLPK 261 >gi|206558755|ref|YP_002229515.1| putative outer membrane protein [Burkholderia cenocepacia J2315] gi|198034792|emb|CAR50659.1| putative outer membrane protein [Burkholderia cenocepacia J2315] Length = 316 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 83/278 (29%), Gaps = 18/278 (6%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 T + + NP + + +T + G + Sbjct: 44 TPVGNGTVATTALPQANPNAGGASGTVVHGTAGTLTPPPANAAPGQVVVGGKVPDEATKA 103 Query: 132 FYLSNSQQSEHCKNSLTR--------DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 L + + N + + ++ K + + + E Sbjct: 104 AVLQKLRDTYGATNVVDQIEVGDVATPPNWSANVQKLLGAQLKQISKGQLKINGTQIEMK 163 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + + Q LA +++TL+ V ++ T F+ S+ Sbjct: 164 GEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQG---VLDQTLANRTIEFETGSAT 220 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ ++L ++ LA I GHTD N LS RA + L+ Sbjct: 221 LTPQGKLILDQMAAALAKMQNRTVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITK 277 Query: 303 GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + +++ +G + +D + NRRI+ V Sbjct: 278 SIPPQQMTT-TGVGPDQPIAPNDTADGRARNRRIEFRV 314 >gi|257462480|ref|ZP_05626892.1| Outer membrane protein [Fusobacterium sp. D12] Length = 217 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A V + I + + F S+ L I +VL Sbjct: 78 DQQEAALRASLKNTAVQVQRDGENISLYL---PGGVTFASDSAQISGNFYSALNSIAQVL 134 Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E ++GHTD++ + N LS RA S Q L+ GV+ +R++ GF + Sbjct: 135 VQYPETQILVQGHTDST---GSFQHNMDLSNRRANSVKQYLIGQGVASNRLTS-QGFGPN 190 Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341 + NRR++I + + Sbjct: 191 NPVADNSTPEGRQMNRRVEIKIAPK 215 >gi|56698003|ref|YP_168374.1| hypothetical protein SPO3171 [Ruegeria pomeroyi DSS-3] gi|56679740|gb|AAV96406.1| OmpA domain protein [Ruegeria pomeroyi DSS-3] Length = 766 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 101/281 (35%), Gaps = 23/281 (8%) Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 D Q E S+ + L+ + + + + + + Sbjct: 487 ALDAQTEAESSAARQRSLAEERAALLAQARAALSEEQAVSTEAQRQTALLNQQVAALRNQ 546 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL----AMKRKKRLQDLAKK 198 + + + +S+ ++ N L + E+ +KRL++ A+ Sbjct: 547 LGSLQALLDDYKARNASAEVQLQSLGQDLNAALARAASEERKRRLLEEAERKRLEEEARV 606 Query: 199 ISSTLSGLVA---DNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQ 253 ++ L + + + G+ I + +FD S+ PE + Sbjct: 607 LAEQAKDLERYRSEFFGRLRDVLGNQEGVRIEGDRFVFSSEVLFDPGSADLSPEGQFEIA 666 Query: 254 KIGEVLA--------HSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKS- 302 K+ +L VI + GHTD P DNW LS RA S + +++S Sbjct: 667 KVARILRAIAADIPPEINWVIRVDGHTDNVPLLGTGKYADNWELSQGRALSVVRYMVESL 726 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 G+ DR+S +GF ++ +D + NRRI++ + ++ Sbjct: 727 GLPPDRLSA-NGFGEYQPVNPADTAEARAQNRRIELKLTEK 766 >gi|325105502|ref|YP_004275156.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] gi|324974350|gb|ADY53334.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] Length = 442 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ +SS+ L ++ L ++ I + GH A N +LS+DRA S Sbjct: 341 FEFNSSVLRTSAYPTLDRVSSSLRADKSKSIQLDGHASAE---GTEAYNMQLSIDRANSV 397 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L+ SGV RI + G+ R ++ NRR++ Sbjct: 398 KTYLVNSGVDAKRI-AVKGYGESRPIASNATEEGRIKNRRVEF 439 >gi|167572001|ref|ZP_02364875.1| hypothetical protein BoklC_19324 [Burkholderia oklahomensis C6786] Length = 439 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 7/146 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + V +I + R +F+ S+ + + VL ++ + L Sbjct: 287 RVAKFLEPEIAAGLVTVRDEADRSVIVL---RGDGLFESGSTSVIDRYMPVLIRVADALN 343 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G+TD +P R NW LS +RA + ++ DRI+ G Sbjct: 344 KVQGSVRVSGYTDDAPVRTARFASNWDLSRERAEAVRGLIAARLDRPDRITA-EGRGTLD 402 Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343 +D + NRR++I + G Sbjct: 403 PVAPNDSPANRARNRRVEITLMLAPG 428 >gi|300771716|ref|ZP_07081591.1| outer membrane protein OprF [Sphingobacterium spiritivorum ATCC 33861] gi|300761705|gb|EFK58526.1| outer membrane protein OprF [Sphingobacterium spiritivorum ATCC 33861] Length = 460 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 56/135 (41%), Gaps = 6/135 (4%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 +G V D + F + Q + F+ SS+ E+ L ++ + L + Sbjct: 328 AGTVVDGSGCPIKFPEPVVNNYTASTGQYGSIQFEFDSSVLKTESYSTLDRLAKELRDNN 387 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 +++ G+ A N LS DRA + Q L+ +GV+ +++ +G+ + Sbjct: 388 SSVTLDGYASAE---GTEAYNMTLSKDRANAVKQYLVNAGVTAAKVTA-NGYGEANPVAS 443 Query: 324 SDPMNSA--NRRIDI 336 + NRR++I Sbjct: 444 NATEEGRIQNRRVEI 458 >gi|153867892|ref|ZP_01998087.1| OmpA family protein [Beggiatoa sp. SS] gi|152144788|gb|EDN71913.1| OmpA family protein [Beggiatoa sp. SS] Length = 170 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 8/119 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNW 285 + + F + LPE + + E++ + + + GHTD N Sbjct: 53 LQFTLYSVFFKTGKAKLLPEGEQQITEFVELIQEYDDSRAIAVEGHTDNR---GSKAYNQ 109 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 RLS RA + L+ G+ +R+ I GF + NRR++I++ Q Sbjct: 110 RLSKRRAETVQNALITKGIEPNRLI-IKGFGEKEPLTTNATKNGRQQNRRVEIILLKNQ 167 >gi|74316145|ref|YP_313885.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259] gi|74055640|gb|AAZ96080.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259] Length = 415 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ P+ + VL + VL T++ + GHT N LS RA S Sbjct: 314 FAFDSAELRPDAVTVLDEAVTVLNRRTDIKVDVVGHTCNI---GPEAYNQGLSERRAKSV 370 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 Y + +GV+ DR++ G+ R ++D NRR+++ V+ Sbjct: 371 YDYFIDNGVAADRLTT-QGYGETRPAYSNDTREGREKNRRVELHVK 415 >gi|109900555|ref|YP_663810.1| OmpA/MotB [Pseudoalteromonas atlantica T6c] gi|109702836|gb|ABG42756.1| OmpA/MotB [Pseudoalteromonas atlantica T6c] Length = 215 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 10/148 (6%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + + + GV + + + + F ++ VL+ Sbjct: 69 AIGNYMDKQEEEFREELADSGVEVYREGDTLRLYM---PGSITFSSGNASVDSSFYPVLK 125 Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + V+ + + GHTD + N RLS RA S L+++GV R+S + Sbjct: 126 DVALVINKYEKTTLMVEGHTDNT---GADDMNQRLSEARANSVKNYLVQNGVDNRRVSTL 182 Query: 313 SGFAHHRLKIASDP--MNSANRRIDILV 338 G + + NRR+++ + Sbjct: 183 -GMGEYTPIADNATQAGRQKNRRVELKI 209 >gi|330951673|gb|EGH51933.1| OmpA/MotB [Pseudomonas syringae Cit 7] Length = 271 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 100/248 (40%), Gaps = 12/248 (4%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 + + + S D + + ++ I + ++E + L ++ Sbjct: 26 QDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYL 85 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218 S+ + + N L K+ +++ +L K++S ++ + + Sbjct: 86 SSRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATT 145 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 146 ETDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 ++N LS DRA + VLM G+ E RI ++ G+ A+ + NRR++ Sbjct: 200 -GDRQENLTLSKDRAQAVADVLMDLGIDEKRI-QVEGYGQEFPVNANTSERGRAQNRRVE 257 Query: 336 ILVEDRQG 343 I+ D +G Sbjct: 258 IVFSDEKG 265 >gi|325297323|ref|YP_004257240.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324316876|gb|ADY34767.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170] Length = 398 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 6/106 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ S E+ L KI ++ ++ + +RGHTD A N LS RA + Y Sbjct: 297 FEFDKSTIKKESYPYLDKIVRLMKNTPIHVVVRGHTDNV---GDADYNMELSKKRAEAVY 353 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L+K+GV + + R +D NRR++ + + Sbjct: 354 NYLLKAGVEPSHL-SYEYYGMTRPISTNDTPEGRLMNRRVEFEITE 398 >gi|300113303|ref|YP_003759878.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113] gi|299539240|gb|ADJ27557.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113] Length = 283 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ P +L K+ E + ++I G+TD+ A N RLS RA +A Sbjct: 181 FGFDSAKLSPNAHTILDKVAEKMRAHPNLKVTITGYTDSI---GNADYNMRLSKLRAEAA 237 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 L G+ R+ + G R ++ + NRR+++ Sbjct: 238 MDYLSSEGIDPSRMEAV-GRGEERPVASNSTKEGRAKNRRVEL 279 >gi|325275390|ref|ZP_08141334.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] gi|324099474|gb|EGB97376.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] Length = 270 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 98/281 (34%), Gaps = 20/281 (7%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 PF + A S+ + + + + +S L+ + + + Sbjct: 1 MNRHAPFAVLAVLALAAGLQGCASQRSSAALEQASAAFQKVKDDSDVLRSAPRDVIRAGE 60 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 L S ++ + + L + ++ L + L Sbjct: 61 SLARAERLSSYIGTGSDVRHYAYLSQRYSEIAGEHAKLALNQERQAKLDLERQRLQLALR 120 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + +Q K + + ++ L ++ +G++ +FD S+ Sbjct: 121 EAKLASVQQQGKWVEAQIAALASEQADRGLVMT-------------LGDVLFDTGSANLK 167 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + K+ + L + + I G+TD++ +N +LS DRA S +L+ GV Sbjct: 168 NTASRTVLKLVQFLQLNPHRVVRIEGYTDST---GTPEENLKLSHDRAQSVADMLVDLGV 224 Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 E R+ ++ G+ A+ + NRR++I+ D +G Sbjct: 225 DEKRL-QVEGYGDQYPIEANASERGRAQNRRVEIVFSDDKG 264 >gi|299532464|ref|ZP_07045855.1| OmpA/MotB [Comamonas testosteroni S44] gi|298719549|gb|EFI60515.1| OmpA/MotB [Comamonas testosteroni S44] Length = 214 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ P L + + + I GHTD+ N +LS+ RA Sbjct: 104 DAFFDFDKSVLKPAGKAKLDDLTGKIKDINLEVIIAVGHTDSV---GSDAYNQKLSVRRA 160 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + L+ G+ + R+ G + + + NRR++I V + Sbjct: 161 EAVKAYLVSKGIEKSRVYT-EGKGEKQPVADNKTAAGRAQNRRVEIEVVGTK 211 >gi|30022590|ref|NP_834221.1| flagellar motor protein MotB [Bacillus cereus ATCC 14579] gi|206969568|ref|ZP_03230522.1| chemotaxis protein MotB [Bacillus cereus AH1134] gi|218232559|ref|YP_002369307.1| flagellar motor protein MotB [Bacillus cereus B4264] gi|296504987|ref|YP_003666687.1| flagellar motor protein MotB [Bacillus thuringiensis BMB171] gi|29898148|gb|AAP11422.1| Chemotaxis motB protein [Bacillus cereus ATCC 14579] gi|206735256|gb|EDZ52424.1| chemotaxis protein MotB [Bacillus cereus AH1134] gi|218160516|gb|ACK60508.1| chemotaxis protein MotB [Bacillus cereus B4264] gi|296326039|gb|ADH08967.1| flagellar motor protein MotB [Bacillus thuringiensis BMB171] Length = 262 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 64 GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 123 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 177 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 3/115 (2%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 + +W I Y+D +T+L A F+V++ +++ D K + F L + Sbjct: 14 HDEHIDETWLIPYSDMLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKE 70 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + + S++ K + + + + + L+ I N +Q Sbjct: 71 FLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 125 >gi|332161223|ref|YP_004297800.1| putative OmpA family protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605118|emb|CBY26616.1| outer membrane protein ImpK/VasF, OmpA/MotB domain [Yersinia enterocolitica subsp. palearctica Y11] gi|325665453|gb|ADZ42097.1| putative OmpA family protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860429|emb|CBX70737.1| hypothetical protein YEW_EP20110 [Yersinia enterocolitica W22703] Length = 458 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 7/136 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + V + T + + MF S PE + V++++ + + Sbjct: 325 LKDEIAKQLVSVDETSSHSKVIFKGDT---MFQVGSDKVRPEIMSVIERVAQEVHRVQGA 381 Query: 266 ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + I GHTD+ P + +N LS RA + + + K+G+ D+I + G + ++ Sbjct: 382 VLIIGHTDSMPINKPGFPNNQVLSEKRAANVARFMEKAGIPTDKI-QFEGKGDTQPVSSN 440 Query: 325 DPMNSA--NRRIDILV 338 D NRR++I V Sbjct: 441 DDAAGRSQNRRVEIFV 456 >gi|298529615|ref|ZP_07017018.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511051|gb|EFI34954.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 251 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 75/172 (43%), Gaps = 8/172 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 S + + ++LQ+ ++ + + ++ ++G+ I++ + + Sbjct: 82 DTSGVLMDRATQFRQLQEAQQETFADIQYYQNEHGIEGI-VGARLDEGKITLT-LPSEVL 139 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR--NIARDNWRLSLDRAY 293 FD PE +LQ + ++ +E +I GHTD P R DNW +S RA Sbjct: 140 FDLGEVELRPEGEELLQDMRDIFNRHSEQRINIEGHTDNIPPREGGRFEDNWEISSLRAL 199 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 + + L + G+ R++ +G+A + + + NRR++ ++E G Sbjct: 200 NTLRFLKQEGIDPGRMTA-TGYADLQPLYPNTTEGNRARNRRVEFVLERHIG 250 >gi|167564829|ref|ZP_02357745.1| hypothetical protein BoklE_19905 [Burkholderia oklahomensis EO147] Length = 439 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 54/146 (36%), Gaps = 7/146 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + V +I + R +F+ S+ + + VL ++ + L Sbjct: 287 RVAKFLEPEIAAGLVTVRDEADRSVIVL---RGDGLFESGSTSVIDRYMPVLIRVADALN 343 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G+TD +P NW LS +RA + ++ DRI+ G Sbjct: 344 KVQGSVRVSGYTDDAPVHTARFASNWDLSRERAEAVRGLIAARLDRPDRITA-EGRGTLD 402 Query: 320 LKIASDP--MNSANRRIDILVEDRQG 343 +D + NRR++I + G Sbjct: 403 PVAPNDSPANRARNRRVEITLMLAPG 428 >gi|78062443|ref|YP_372351.1| hypothetical protein Bcep18194_B1593 [Burkholderia sp. 383] gi|77970328|gb|ABB11707.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 440 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 7/145 (4%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L + V +I + R +F S+ + + VL ++ + L Sbjct: 287 IAKFLEPEIAAGLVSVRDDADRSVIVL---RGDGLFKSGSTSVIDRYVPVLARVADALNK 343 Query: 262 STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + G+TD +P NW LS +RA + ++ +R+ G Sbjct: 344 VPGNVRVTGYTDDTPVHTARFASNWDLSRERAEAVRGMIAARLDHPERL-AAEGRGTLDP 402 Query: 321 KIASDP--MNSANRRIDILVEDRQG 343 +D + NRR++I + G Sbjct: 403 VAPNDSPANRALNRRVEITLLPAPG 427 >gi|84514671|ref|ZP_01002035.1| flagellar motor protein [Loktanella vestfoldensis SKA53] gi|84511722|gb|EAQ08175.1| flagellar motor protein [Loktanella vestfoldensis SKA53] Length = 533 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 90/248 (36%), Gaps = 20/248 (8%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + K S ++Q L I L N + ++ DS++ + L +N Sbjct: 288 EQKAQSDASQRQVAVLNEQILALRNQVGNLQSLLNIAEDSDRAA-QVQIETLGAQLNTAL 346 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA---DNIVKGVLFETTRTGILISI 228 + + L + RL+ A ++ + L D + + I I Sbjct: 347 ARVVSEERQRIALEEAERSRLEAEAARLQAEAENLERFRSDFFGQLRQVLEGQDRIRIEG 406 Query: 229 IDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPF- 277 + +F+ + P+ + + +L +I + GHTD +P Sbjct: 407 DRFVFSSEVLFEVGRADLSPQGRDEIANVAGILNDIADDIPAGIDWIIRVDGHTDDNPIA 466 Query: 278 -RNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333 DNW LS RA S + ++ G+ R+ +GF ++ +D + NRR Sbjct: 467 AGGRFADNWELSQARALSVVRFMVDDLGIPPMRL-AANGFGEYQPLNTADTAQARAQNRR 525 Query: 334 IDILVEDR 341 I++ + +R Sbjct: 526 IELKLTER 533 >gi|307826004|ref|ZP_07656218.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] gi|307732979|gb|EFO03842.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] Length = 266 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 89/258 (34%), Gaps = 12/258 (4%) Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 Q P + S ++I L + + S + + + N + ++ Sbjct: 3 PQTPFQPSWLSRIPLVLLSALMTACAPSVNMSLERARSDYQQAANDPAVKADASADLFAA 62 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + E L++ K+ ++L+ K + Sbjct: 63 EKLLQKAETSWQEDEDSEEIDHLSYLTSRKVDLARATASQTASKRAFEELSAK-RDEIRL 121 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE- 264 D + + + GIL+++ D +FD + S ++ + + E L + Sbjct: 122 KARDAEIARLKAKKVPQGILVTLGD----VLFDTARSDLKAGSLQNIYPLVEYLKVHADT 177 Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 ++ I GHTD + N +LS RA + L+ +GV+ +RI+ G + Sbjct: 178 MVKIEGHTDNQ---GSSDYNAQLSQRRAEAVRNFLVTNGVAPERITA-QGMGKDYPIATN 233 Query: 325 DPMNSA--NRRIDILVED 340 NRR+++ + D Sbjct: 234 SSAAGRQQNRRVEVTITD 251 >gi|294506240|ref|YP_003570298.1| Outer membrane protein A [Precursor] [Salinibacter ruber M8] gi|294342568|emb|CBH23346.1| Outer membrane protein A [Precursor] [Salinibacter ruber M8] Length = 285 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 75/268 (27%), Gaps = 7/268 (2%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + P+ ++ + + + + + ++ Sbjct: 6 SPGGVGDGPAAVPQPPAEPDGNFASGPSLGTGHRPDCPLHLLSRFPFSFHMPMSSVRHST 65 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 L + K + + + + A Sbjct: 66 PLVLLVTALLLGGCSSLSNTEKGAIIGTGAGAAGGAAVGKAAGGTAEGAIIGAAVGGAAG 125 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + A+ + + + + + +FD SS E L + E Sbjct: 126 ALIGSRMDTKAEELDEELDNADVERVGEGIKVTFDSGILFDFDSSTLRAEARQNLTEFAE 185 Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + + + GHTDA N +LS RA SA + L+ GV R++ + G Sbjct: 186 SMQGFEDTKILVVGHTDAQ---GSEEYNQKLSDRRAESATRHLVDRGVDPSRLTSV-GRG 241 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 +++ NRR+++ + + Sbjct: 242 ETEPVASNETEEGRQQNRRVEVAIYANE 269 >gi|150398661|ref|YP_001329128.1| OmpA/MotB domain-containing protein [Sinorhizobium medicae WSM419] gi|150030176|gb|ABR62293.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419] Length = 221 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 61/169 (36%), Gaps = 11/169 (6%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + A + + S L A GV I++++ F Sbjct: 60 DAALVGAGIGALGGGLVGNYMDQQESELRAQLQGTGVSVTRAGDRIILNMPSNIT---FA 116 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 +P L + VL ++ I + GHTD++ A N LS RA S Sbjct: 117 TDRDQVIPAFYSTLDSVAIVLRKFSKTLIDVDGHTDST---GSASYNQGLSERRAASVAN 173 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED-RQG 343 L GV + R+S + G+ R ++ NRR++I + +QG Sbjct: 174 YLASRGVDQRRMSAV-GYGMERPVASNASEIGRVQNRRVEISIAPIKQG 221 >gi|294782738|ref|ZP_06748064.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA] gi|294481379|gb|EFG29154.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA] Length = 127 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 5/130 (3%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 + ++I+ FD S+ P+ +L + + + + ++I GHTD Sbjct: 1 NIDITNIEAPKEMTIVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQNNYELTIEGHTD 60 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--N 331 + + N LS RA + L++ G+ EDRI I ++ N Sbjct: 61 SV---GSNQYNIGLSRRRAEAVKAKLIEFGLPEDRIVGIEAKGEEYPVATNETPEGRLQN 117 Query: 332 RRIDILVEDR 341 RR++ + R Sbjct: 118 RRVEFRLVQR 127 >gi|330943087|gb|EGH45518.1| thrombospondin type 3 repeat-containing OmpA/MotB protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 344 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + + GHT Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTTTVEGHT 274 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + QVL+ GV R++ + G+ R + Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESRPVADNATEAGRA 330 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 331 VNRRVEAEVEA 341 >gi|289624411|ref|ZP_06457365.1| ompA family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646675|ref|ZP_06478018.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330867435|gb|EGH02144.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330987431|gb|EGH85534.1| ompA family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 271 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 100/248 (40%), Gaps = 12/248 (4%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 + + + S D + + ++ I + ++E + L ++ Sbjct: 26 QDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVSHYAYL 85 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218 S+ + + N L K+ +++ +L K++S ++ + + Sbjct: 86 SSRYSEIAREHSNLMLSQERLAKMDMERQRLQLALREAKLASAQQQGRWLEDQILSLATT 145 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 146 ETDRGLVMTLGD----VLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 ++N +LS DRA + VLM GV E RI + G+ A+ + NRR++ Sbjct: 200 -GDRQENLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQQFPVNANASERGRAQNRRVE 257 Query: 336 ILVEDRQG 343 I+ D +G Sbjct: 258 IVFSDEKG 265 >gi|237803660|ref|ZP_04591245.1| OprF [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025642|gb|EGI05698.1| OprF [Pseudomonas syringae pv. oryzae str. 1_6] Length = 344 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 8/197 (4%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 R + + + E + + SK+ A + + + Sbjct: 149 ARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDNDGVCDNVDK 208 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V + + ++ FD + S+ P + ++ + + + + Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFNKSVVKPNSYGDIKNLADFMQQYPSTTT 268 Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 + GHTD+ N +LS RA + QVL+ GV R++ + G+ R + Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGAGRVNSV-GYGESRPVADNA 324 Query: 326 PMNSA--NRRIDILVED 340 NRR++ VE Sbjct: 325 TEAGRAVNRRVEAQVEA 341 >gi|42528265|ref|NP_973363.1| flagellar motor protein MotB [Treponema denticola ATCC 35405] gi|4426946|gb|AAD20620.1| flagellar motor protein MotB [Treponema denticola] gi|41819535|gb|AAS13282.1| flagellar motor rotation protein B [Treponema denticola ATCC 35405] gi|325474545|gb|EGC77731.1| flagellar motor protein MotB [Treponema denticola F0402] Length = 239 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 11/164 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 +M ++ + LA + +S + + + GI+IS+ F S+ Sbjct: 77 SMPSMEKGKMLASALKKAVSLFAPEIKTNKIAVTSDERGIVISLASD---VFFYPGSAEL 133 Query: 245 L-PETIVVLQKIGEVLAHST---EVISIRGHTDA-SPFRNIARDNWRLSLDRAYSAYQVL 299 E+ L + + L+ + GHTD+ N+ + NW LS RA + L Sbjct: 134 NIAESRDTLLNLAQFLSSQDLASYRFRVEGHTDSGVTDPNVWKSNWELSSARAINILHSL 193 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 G E R ++G+A R ++D NRR+DI++ D Sbjct: 194 TDFGAQESRF-SVAGYADTRPIFSNDTAEGRAYNRRVDIIILDD 236 >gi|261879154|ref|ZP_06005581.1| OmpA family protein [Prevotella bergensis DSM 17361] gi|270334253|gb|EFA45039.1| OmpA family protein [Prevotella bergensis DSM 17361] Length = 284 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 65/163 (39%), Gaps = 14/163 (8%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 K + L +++ L+ ++ +K V + + + IS+ D ++ S Sbjct: 110 KSKSDSLNMVLTNNLTRSLSREEMKEVDVQVLKGVVYISLADNM---LYKSGSYEINDRA 166 Query: 249 IVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR------DNWRLSLDRAYSAYQVLMK 301 L KI +++ + I G+TD P + +NW LS RA S Q L+ Sbjct: 167 EETLGKIAKIIMDYKDYDVLIEGNTDNVPINTSSELMKNIRNNWDLSALRASSVVQYLID 226 Query: 302 S-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 GV+ R++ G ++D NRR I++ + Sbjct: 227 HFGVAPGRLTAG-GRGEFNPIASNDTALGKQRNRRTQIIITPK 268 >gi|254510549|ref|ZP_05122616.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11] gi|221534260|gb|EEE37248.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11] Length = 223 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 69/203 (33%), Gaps = 10/203 (4%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 N ++ K L + PL + + Sbjct: 22 ADPGTLNLPADPNQNAKQGALLGGLIGAGVGAIANDSDPLLGALAGGAIGAAGGGVIGNQ 81 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + L G++ +++++ + F SS P L ++G+ Sbjct: 82 LDRQAAELRQQLANDGIIITNAGDRLIVTVPNDIT---FATDSSTVNPALRADLVRVGQN 138 Query: 259 LAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + GHTD++ A N LS RA S +L +GV+ R+S I G Sbjct: 139 LVRYPNSSVQVIGHTDST---GEASYNQGLSERRARSVADILQANGVNGARLSTI-GLGE 194 Query: 318 HRLKIASDP--MNSANRRIDILV 338 +R ++ + NRR+DI + Sbjct: 195 NRPAASNLTPEGRARNRRVDIEI 217 >gi|302187430|ref|ZP_07264103.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642] Length = 271 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 100/247 (40%), Gaps = 12/247 (4%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + S D + + ++ I + ++E + L ++ S Sbjct: 27 DSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYLS 86 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFET 219 + + + N L K+ +++ +L K++S ++ + + Sbjct: 87 SRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTE 146 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 147 TDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST--- 199 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 ++N +LS DRA + VLM GV E RI + G+ A+ + NRR++I Sbjct: 200 GDRQENLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQEFPVNANTSERGRAQNRRVEI 258 Query: 337 LVEDRQG 343 + D +G Sbjct: 259 VFSDEKG 265 >gi|289433964|ref|YP_003463836.1| chemotaxis protein MotB [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|315301919|ref|ZP_07872930.1| chemotaxis protein MotB [Listeria ivanovii FSL F6-596] gi|289170208|emb|CBH26748.1| chemotaxis protein MotB [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313629715|gb|EFR97837.1| chemotaxis protein MotB [Listeria ivanovii FSL F6-596] gi|313634398|gb|EFS00987.1| chemotaxis protein MotB [Listeria seeligeri FSL N1-067] Length = 275 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 102/326 (31%), Gaps = 69/326 (21%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ + +W I Y+D +T+L+A F+V++ ++ D + + F + Sbjct: 3 KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 ++ + P+ + N + ++DE K + + + + +N + + Sbjct: 63 GNQAYVSKGEGPDDPNVNAVLKAMDEQDKKKQANEEEKAKKAAAALLKKQNEEKIEAFKK 122 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 Q + + + K K +D I ++ S E + + Sbjct: 123 QIDSY---IQAEKLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAK------- 172 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I D +F + Sbjct: 173 ----------------------------EIGD-----LFAQGKGTME------------- 186 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGF 315 + GHTD P NW LS+ RA + + +++ V+ S G+ Sbjct: 187 -------GIVSGHTDNVPISTSTYSSNWELSVARAVNFMEAIIQENNEVNPGEFSA-RGY 238 Query: 316 AHHRLKIASD--PMNSANRRIDILVE 339 + +D NRR++I+V Sbjct: 239 GEFKPVAKNDVATNREKNRRVEIMVR 264 >gi|238026069|ref|YP_002910300.1| OmpA/MotB [Burkholderia glumae BGR1] gi|237875263|gb|ACR27596.1| OmpA/MotB [Burkholderia glumae BGR1] Length = 355 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 85/286 (29%), Gaps = 16/286 (5%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + + + S+ ++ SV + +T + Sbjct: 70 QGPSGGLSAPPQAEGGTSQNGTVLTGTNVAGGTGAGPVTGAGTGATVSVPPQASATPGQV 129 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + + Q ++ + +T S N ++ K Sbjct: 130 VVGGKVPDEATKAAVLQKLRDTYGAGNVVDQIEVGDVATPPNWSSNVQKLIGPQLKQISK 189 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RN 233 + + + L VA ++ + T R + +S +Q Sbjct: 190 GQLRIDGTSIDVKGEVRNEALRQQVASDMANQLNPTYTIRNALRVSASEQGLLDQTLANR 249 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRA 292 T F+ S+ P+ +L ++ ++ I GHTD N LS RA Sbjct: 250 TIEFETGSATLTPQGRAILDQMAAAMSRMANRSVAIIGHTDN---SGNRASNIALSQARA 306 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ G+ ++S +G + ++D + NRRI+ Sbjct: 307 DAVKGYLVAKGIPSQQLST-TGVGPDQPIASNDTAEGRARNRRIEF 351 >gi|330973477|gb|EGH73543.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT] Length = 271 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 99/247 (40%), Gaps = 12/247 (4%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + S D + + ++ I + ++E + L ++ S Sbjct: 27 DSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYLS 86 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFET 219 + + + N L K +++ +L K++S ++ + + Sbjct: 87 SRYSEIAREHSNLMLSQERLAKTDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTE 146 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 147 TDRGLVMTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST--- 199 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 ++N +LS DRA + VLM G+ E RI + G+ A+ + NRR++I Sbjct: 200 GDRQENLKLSKDRAQAVADVLMDLGIDEKRIH-VEGYGQEFPVNANTSERGRAQNRRVEI 258 Query: 337 LVEDRQG 343 + D +G Sbjct: 259 VFSDEKG 265 >gi|30249028|ref|NP_841098.1| outer membrane protein [Nitrosomonas europaea ATCC 19718] gi|30138645|emb|CAD84936.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718] Length = 220 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 10/150 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ-K 254 K + A V+ +T ++++I FD S+ P+ +L Sbjct: 73 KKMEEQKIQMENATAGTGVVVSQTPDNQLMLNIPSD---ISFDTGSAQIKPDFRPILDSF 129 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 +L + ++I GHTD++ N LS++RA S + L GV RI +I G Sbjct: 130 ATSLLNNPGTRVTIVGHTDST---GSDAVNNPLSVNRAASTREYLASRGVPFQRI-QIDG 185 Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQ 342 ++ +++ + NRR++I V + + Sbjct: 186 RGSYQPVASNNTAAGRAKNRRVEIYVSETR 215 >gi|152983975|ref|YP_001346830.1| outer membrane protein [Pseudomonas aeruginosa PA7] gi|150959133|gb|ABR81158.1| probable outer membrane protein [Pseudomonas aeruginosa PA7] Length = 261 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 89/239 (37%), Gaps = 13/239 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 T + +L+ +N + + ++ + + + G+D L Sbjct: 21 STPPNANLEQARSNFSALQSQPDATKVAALETKDAGDWLAKADKAYQDGEDQRDVDQLAY 80 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N+ + + + Q ++ + + L D + + + T G + Sbjct: 81 LTNQRIELAKQTIVLRNAESQLQNASAQRAQARLDARTAQL--DKLRSQLNAKQTSRGTM 138 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 ++ D +FD S P + +Q++ E L + E + G+TD++ A N Sbjct: 139 VTFGD----VLFDLDKSDLKPGAMRNIQQLAEFLQQNPERQVIVEGYTDST---GSANYN 191 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RLS RA S L+ G+S +R+ G+ ++ + NRR+++ + + Sbjct: 192 QRLSERRADSVRMALLSRGISPERV-ATRGYGKEYPVASNGTSSGRAMNRRVEVTISND 249 >gi|228974615|ref|ZP_04135181.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981210|ref|ZP_04141510.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407] gi|228778410|gb|EEM26677.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407] gi|228785018|gb|EEM33031.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 234 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 36 GGTGNKEFLSDQKPNEEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 95 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 96 ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 149 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227 Score = 49.6 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 3/100 (3%) Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 +T+L A F+V++ +++ D K + F L + + + Sbjct: 1 MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKEFLSDQKPNEEKELSA 57 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S++ K + + + + + L+ I N +Q Sbjct: 58 SSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 97 >gi|260595859|ref|YP_003208430.1| hypothetical protein CTU_00670 [Cronobacter turicensis z3032] gi|260215036|emb|CBA26725.1| hypothetical protein CTU_00670 [Cronobacter turicensis z3032] Length = 380 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 49/111 (44%), Gaps = 4/111 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290 + +F +S++ V+ ++ + + + + I + G++D P R+ N+ LSL Sbjct: 254 KGDGLFASASTVVRDRYEPVIDRVAQAMNNVSGKILVVGYSDNVPIRSARFASNYELSLS 313 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 RA S ++L R+ + G ++ + NRR++I + Sbjct: 314 RAESVQKMLQAHLADPSRV-RAQGRGEMDPIAPNNTPENRARNRRVEITLL 363 >gi|302135199|ref|ZP_07261189.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 344 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 8/197 (4%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 R + + D E + + SK+ A + + + Sbjct: 149 ARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCPDSDNDGVCDNVDK 208 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V + + ++ FD + S+ P ++ ++ + + + + + Sbjct: 209 CPDTPANVTVDADGCPAVAEVVRVELDVKFDFNKSVVKPNSMGDIKNLADFMQQYPQTTT 268 Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 + GHTD+ N +LS RA + QVL+ GV R++ + G+ R + Sbjct: 269 TVEGHTDSV---GPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSV-GYGESRPVADNA 324 Query: 326 PMNSA--NRRIDILVED 340 NRR++ VE Sbjct: 325 TDAGRAVNRRVEAEVEA 341 >gi|257125214|ref|YP_003163328.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b] gi|257049153|gb|ACV38337.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b] Length = 173 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 5/156 (3%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + +K +L T + + + + + + I+ N FD +S+ Sbjct: 18 APSTAKKITTSNLRNNAMKTTAVEIEGVNIDDLNTKEDKIKENDIIVLDANALKFDFNSA 77 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 E VL+K+ + ISI G+TD+ + N LSL RA S + L++ Sbjct: 78 TIKEEYTPVLEKLKNYIESKNHKISITGYTDS---KGTKEYNRELSLRRAESVEEKLIEL 134 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 G++ ++I + G ++D NRRI+I Sbjct: 135 GLAPEKIIETKGNGDANPIASNDTEEGRSVNRRIEI 170 >gi|313639080|gb|EFS04061.1| chemotaxis protein MotB [Listeria seeligeri FSL S4-171] Length = 275 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 103/326 (31%), Gaps = 69/326 (21%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ + +W I Y+D +T+L+A F+V++ ++ D + + F + Sbjct: 3 KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 ++ + P+ + N + ++DE K + + + + +N + + Sbjct: 63 GNQAYVSKGEGPDDPNVNAVLKAMDEQDKKKQANEEEKAKKAAAALLKKQNEEKIEAFKK 122 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 Q + + + K + K +D I ++ S E + + Sbjct: 123 QIDSY---IQAEKLGTKMMTKYSDEGLLITIRDDILFQSGSAELSAGKREIAK------- 172 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I D +F + Sbjct: 173 ----------------------------EIGD-----LFAQGKGTME------------- 186 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGF 315 + GHTD P NW LS+ RA + + +++ V+ S G+ Sbjct: 187 -------GIVSGHTDNVPISTSTYSSNWELSVARAVNFMEAIIQENNEVNPGEFSA-RGY 238 Query: 316 AHHRLKIASD--PMNSANRRIDILVE 339 + +D NRR++I+V Sbjct: 239 GEFKPVAKNDIATNREKNRRVEIMVR 264 >gi|167576750|ref|ZP_02369624.1| hypothetical protein BthaT_01360 [Burkholderia thailandensis TXDOH] Length = 437 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 7/141 (4%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V +I + R +F S+ + + VL +I + L Sbjct: 290 LEPEIAAGLVSVRDEADRSVIVL---RGDGLFGSGSTSVIDRYMPVLTRIADALNRVPGS 346 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + + G+TD +P NW LS +RA + ++ DRI+ G + Sbjct: 347 VRVSGYTDDTPVHTARFASNWDLSRERAEAVRGLIAARLDRPDRITA-EGRGTLDPVAPN 405 Query: 325 DP--MNSANRRIDILVEDRQG 343 D + NRR++I + G Sbjct: 406 DSPANRARNRRVEITLMLAPG 426 >gi|71735961|ref|YP_274192.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556514|gb|AAZ35725.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 271 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 100/248 (40%), Gaps = 12/248 (4%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 + + + S D + + ++ I + ++E + L ++ Sbjct: 26 QDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYL 85 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218 S+ + + N L K+ +++ +L K++S ++ + + Sbjct: 86 SSRYSEIAREHSNLMLSQERLAKMDMERQRLQLALREAKLASAQQQGRWLEDQILSLATT 145 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 146 ETDRGLVMTLGD----VLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 ++N +LS DRA + VLM GV E RI + G+ A+ + NRR++ Sbjct: 200 -GDRQENLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQQFPVNANASERGRAQNRRVE 257 Query: 336 ILVEDRQG 343 I+ D +G Sbjct: 258 IVFSDEKG 265 >gi|315635918|ref|ZP_07891180.1| outer membrane fibronectin-binding protein [Arcobacter butzleri JV22] gi|315479897|gb|EFU70568.1| outer membrane fibronectin-binding protein [Arcobacter butzleri JV22] Length = 338 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + + + +V+ +I HTD+ N +LS RA SA Sbjct: 236 FDTAKADIKDSYNSRINEFAKVMKADPKLKANIEAHTDSV---GTDAYNQKLSERRATSA 292 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 L+ +GV +DRI + G+ R ++D + NRR++ Sbjct: 293 VNALVAAGVEKDRIKAV-GYGESRPIASNDTVEGRAENRRVE 333 >gi|238797993|ref|ZP_04641483.1| Type VI secretion system OmpA/MotB family protein [Yersinia mollaretii ATCC 43969] gi|238718198|gb|EEQ10024.1| Type VI secretion system OmpA/MotB family protein [Yersinia mollaretii ATCC 43969] Length = 446 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 4/110 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290 R MF S PE + V++++ + + + I GHTD+ P + +N LS Sbjct: 336 RGDTMFQVGSDKVRPEIVNVIERVAQEVHRVKGAVLIVGHTDSMPINKPGYPNNQVLSEK 395 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + + + K+G+ +I + G + +D NRR++I V Sbjct: 396 RAANVARFMEKAGIPTGKI-RFEGKGDTQPVSRNDDAAGRSQNRRVEIFV 444 >gi|88860858|ref|ZP_01135494.1| putative lipoprotein [Pseudoalteromonas tunicata D2] gi|88817071|gb|EAR26890.1| putative lipoprotein [Pseudoalteromonas tunicata D2] Length = 214 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + GV + + + F S L I + Sbjct: 73 YMDKQEQAFRDELAGSGVEVVREGDNLRLVMPSNIT---FATDQSYISTGFHDTLDAIAK 129 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V+ +SI GHTD++ N LS RA S L+ + + RIS G+ Sbjct: 130 VMNKYEKTFLSIEGHTDST---GKTEYNQNLSEQRALSVKNYLLNKQILDVRIST-QGWG 185 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 R +++ + NRR++I + + Sbjct: 186 ESRPIASNETSSGRALNRRVEIQIVPNK 213 >gi|327438679|dbj|BAK15044.1| flagellar motor protein [Solibacillus silvestris StLB046] Length = 251 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 11/160 (6%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + ++RLQ+ ++ ++ + + + T G+LI+I D +FD + Sbjct: 88 EDQERLQETQNRVDEFIA---INELEDQFETKMTDEGLLITIRDS---ILFDMGRADVKA 141 Query: 247 ETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGV 304 E + ++ ++L + I GHTD P + NW LS+ RA + + ++ Sbjct: 142 EYDTIADELAQLLMFDPPRNVVITGHTDNVPIKTPEFDSNWDLSVMRAVNFMKEIVSGNE 201 Query: 305 S-EDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + + + GF + +D + NRR+++LV+ R Sbjct: 202 QLDSKYFSVKGFGEFQPIATNDTQEGRAKNRRVEVLVQPR 241 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 31/81 (38%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 SW + YAD +T+L+A F+V++ ++ D+ + + F Q P Sbjct: 16 DESWLVPYADILTLLLALFIVLFASSSVDEKKLEQMSAVFTNIFTGGTGVMDNPAIIQTP 75 Query: 90 PERSSQNKIDLSIDEHITKNS 110 + D+ + + Sbjct: 76 DNSTPTGISKYIEDQERLQET 96 >gi|229072015|ref|ZP_04205225.1| OmpA/MotB domain protein [Bacillus cereus F65185] gi|229081763|ref|ZP_04214256.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2] gi|228701608|gb|EEL54101.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2] gi|228711174|gb|EEL63139.1| OmpA/MotB domain protein [Bacillus cereus F65185] Length = 234 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 36 GGTGNKEFLSDQKPNDEKELSASSLEAEQTKKQEEARAKEKKEMDELKALQKKIDQYINE 95 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 96 ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 149 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 3/100 (3%) Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 +T+L A F+V++ +++ D K + F L + + + Sbjct: 1 MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKEFLSDQKPNDEKELSA 57 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S++ TK + + + + + L+ I N +Q Sbjct: 58 SSLEAEQTKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 97 >gi|146328667|ref|YP_001209012.1| OmpA family protein [Dichelobacter nodosus VCS1703A] gi|146232137|gb|ABQ13115.1| OmpA family protein [Dichelobacter nodosus VCS1703A] Length = 225 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 +F P L + + + + I I GHTD++ A N LS Sbjct: 104 PGDVLFATDEYQIRPNFYQTLNSVAQTMNQYPQTIVHIYGHTDST---GRAAYNQGLSER 160 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA SA Q LM+ GV+ RI G+ + + + + NRR+++ ++ Sbjct: 161 RANSAAQYLMQQGVNMQRILS-KGYGQNYPRANNATPDGRAQNRRVEVYIKA 211 >gi|86138055|ref|ZP_01056630.1| hypothetical protein MED193_00970 [Roseobacter sp. MED193] gi|85825082|gb|EAQ45282.1| hypothetical protein MED193_00970 [Roseobacter sp. MED193] Length = 477 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 60/170 (35%), Gaps = 7/170 (4%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + + + +Q L ++++ L + V ++I + Sbjct: 306 DSGPAVELERRAPPPPPPPPIQTLEEQVAKVADFLGPEIDEGIVQVFQKGNTLIIRL--- 362 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290 + MF S + ++ E L + + GH+D P R+ N LSL Sbjct: 363 AGSGMFGSGSDQLSKAFKTPVARVAEALNDEKGQVIVAGHSDNVPIRSSRFPSNMALSLA 422 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA S + + DR+S G A + + NRRI+IL+ Sbjct: 423 RAKSVMSGMAQVFDDPDRLSA-EGRAEKEPIADNGTKAGRAKNRRIEILL 471 >gi|326316785|ref|YP_004234457.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373621|gb|ADX45890.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 219 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ PE L + + + + I GHTD+ N +LS+ RA Sbjct: 110 DAFFDFDKSVLKPEGKAKLDDLVSKVKNVNLEVIIAVGHTDSI---GTDAYNQKLSVRRA 166 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L+ G+ ++R+ G + + + NRR++I V + Sbjct: 167 EAVKAYLVSKGIEKNRVYT-EGKGEKQPIADNKTKEGRAKNRRVEIEVVGTR 217 >gi|149377133|ref|ZP_01894882.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter algicola DG893] gi|149358551|gb|EDM47024.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter algicola DG893] Length = 222 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I + + FD + S P L+ + Sbjct: 82 YMDKQEAQLRRKLEGSGVRVVRNGDEIELVM---PGNITFDVNQSSIKPSFSNTLESVAL 138 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL +I I GHTD++ N LS RA S L+ G+ R ++ +G+ Sbjct: 139 VLKEFDKTIIQIEGHTDST---GSRDYNQLLSERRAGSVRDFLLNQGIEPKR-TRATGYG 194 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 ++D + NRR+++ + Q Sbjct: 195 PRYPIASNDTESGREQNRRVELTLVPMQ 222 >gi|120611935|ref|YP_971613.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1] gi|120590399|gb|ABM33839.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1] Length = 219 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ PE L + + + + I GHTD+ N +LS+ RA Sbjct: 110 DAFFDFDKSVLKPEGKAKLDDLVSKVKNVNLEVIIAVGHTDSI---GTDAYNQKLSVRRA 166 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L+ G+ ++R+ G + + + NRR++I V + Sbjct: 167 EAVKAYLVSKGIEKNRVYT-EGKGEKQPIADNKTKEGRAKNRRVEIEVVGTR 217 >gi|254483376|ref|ZP_05096606.1| OmpA family protein [marine gamma proteobacterium HTCC2148] gi|214036360|gb|EEB77037.1| OmpA family protein [marine gamma proteobacterium HTCC2148] Length = 214 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 10/149 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + GV I + + F+ S VL +G Sbjct: 72 AYMDVQEAKLKEELQGTGVQVVREGDNIRLIM---PGNITFETDSYNLRSSFYSVLNSVG 128 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +VL+ + + GHTD + + N LS RA S L V R+ + G Sbjct: 129 QVLSKYADTTLRVSGHTDNT---GSRQYNQTLSERRAGSVADYLATREVDRARML-VQGM 184 Query: 316 AHHRLKIASDPM--NSANRRIDILVEDRQ 342 + + + NRR+++ + Q Sbjct: 185 GFDQPIADNGSAAGRAQNRRVELYILPNQ 213 >gi|169634041|ref|YP_001707777.1| putative outer membrane protein [Acinetobacter baumannii SDF] gi|169152833|emb|CAP01862.1| putative outer membrane protein [Acinetobacter baumannii] Length = 217 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 52/148 (35%), Gaps = 9/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV G + I+ + FD + S P L K+ + Sbjct: 76 YLDQKEKKLREQMAGTGVEVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYATLDKVAQ 133 Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 LA + I + G+TD + N LS RA S L GV RI G+ Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVKNYLAGKGVPSSRIDA-QGYG 189 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 + + NRR++I + +Q Sbjct: 190 SSNPIADNSTASGREQNRRVEISIYAKQ 217 >gi|77458004|ref|YP_347509.1| OmpF [Pseudomonas fluorescens Pf0-1] gi|77382007|gb|ABA73520.1| outer membrane fibronectin-binding protein [Pseudomonas fluorescens Pf0-1] Length = 344 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + GHT Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 274 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + QVL GV R+ I G+ R + Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSI-GYGESRPVADNKTEAGRA 330 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 331 VNRRVEAQVEA 341 >gi|218899667|ref|YP_002448078.1| chemotaxis protein MotB [Bacillus cereus G9842] gi|218542530|gb|ACK94924.1| chemotaxis protein MotB [Bacillus cereus G9842] Length = 262 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 64 GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 123 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 177 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 3/115 (2%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 + +W I Y+D +T+L A F+V++ +++ D K + F L + Sbjct: 14 HDEHIDETWLIPYSDMLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKE 70 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + + S++ K + + + + + L+ I N +Q Sbjct: 71 FLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 125 >gi|110639014|ref|YP_679223.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110281695|gb|ABG59881.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC 33406] Length = 323 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 14/193 (7%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS-STLSGLVADNIVKGVLFE 218 + + +NK + K + +R++R+ +L K I+ + N V L Sbjct: 118 NASELEKLNKSLAKRELEVGKLQADLSERERRVNELEKIIADKERAVNELRNKVTSALLN 177 Query: 219 TTRTGILISIIDQRNTP------MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 + I + D + +F S+ P+ + L+K+ VL ++ + GH Sbjct: 178 YKDKDLTIQVKDGKVYVSLAEQLLFKSGSTDVDPKGVEALKKLAAVLKEQQDITIMVEGH 237 Query: 272 TDASPFR---NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 TD P N +DNW LS+ RA S ++L +GV + G + Sbjct: 238 TDDVPVSKGTNGIKDNWDLSVLRATSITRILTGAGVDPIHVVPA-GHGEFIPVATAKTAE 296 Query: 329 SA--NRRIDILVE 339 + NRR +I++ Sbjct: 297 ARSQNRRTEIILT 309 >gi|110636612|ref|YP_676819.1| peptidoglycan-associated outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110279293|gb|ABG57479.1| peptidoglycan-associated outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 239 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 10/133 (7%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269 + + + R I +D FD + PE + + L + I I Sbjct: 113 FDQEIRIKLIRDYARIFTLDN---VYFDVNKWNIKPECEPAIDNLYNSLTLNPNMHIEIA 169 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 GHTD+ A DN LS RA + L++ G+ R+ G+ ++ +D + Sbjct: 170 GHTDSD---GDAHDNLVLSQRRAEAVMNHLIQKGLDPKRVQA-KGYGEYKPIAPNDSPQN 225 Query: 330 --ANRRIDILVED 340 NRR ++ V D Sbjct: 226 KYRNRRTEVRVLD 238 >gi|332662636|ref|YP_004445424.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332331450|gb|AEE48551.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 550 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 83/278 (29%), Gaps = 16/278 (5%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + G+ Q P++ D S Q ++ + Sbjct: 278 DACKDVAGLKALQGCPDQDGDGIPDKDDQCPEVAGSALFAGCPDTDGDGIQDAADDCPTV 337 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + + C ++ D + + + N+ +K A L+ Sbjct: 338 AGLATLKGCPDA-DGDGITDEKDLCPNEAGTAANQGCPDKDNDGVLDKDDACPDIAGLKQ 396 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSSIPLP 246 + G+ F + I + + F+ +S+ L Sbjct: 397 FNGCPDTDNDGIEDRLDKCPTTFGLSSNNGCPEIKAEDKAVLAFAMSNVNFETNSAKLLA 456 Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 ++ VL K+ E++ + + + GHTD N RLS R + L G+S Sbjct: 457 SSLEVLDKVAEIMNRYPDFMLYMDGHTDNV---GEEATNLRLSESRVLACSAYLQTKGIS 513 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 I + GF + + NRR++ VE + Sbjct: 514 AANI-RTQGFGESKPLADNKTAAGRRQNRRVEFRVEPK 550 >gi|302037673|ref|YP_003797995.1| flagellar motor protein MotB [Candidatus Nitrospira defluvii] gi|300605737|emb|CBK42070.1| Flagellar motor protein MotB [Candidatus Nitrospira defluvii] Length = 259 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 8/150 (5%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K+I + +A + + ET I+IS+ + +F + PE + L+ + Sbjct: 93 MKEIMKKIHPSLALEMPDIKIIETGNGTIMISLPES---ILFTSGEARVRPEALPFLKSL 149 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISKIS 313 ++L + I GHTD P R NW LS RA ++ + V +S + Sbjct: 150 AQILIEMDRHVRILGHTDNVPIRTAQFPSNWELSAVRAVMVVRIFSELYEVPISHLSA-T 208 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDR 341 GFA + +D NRR++I++ ++ Sbjct: 209 GFADSKPVATNDTPEGRTKNRRVEIIILEK 238 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 32/86 (37%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + N W + YADF+T+L AFF+VM+ +++ ++ + + + + Sbjct: 3 KKKHEEHENHERWLVSYADFITLLFAFFVVMYSVSSVNEGKYRTVSDSIKAALNPVNSTP 62 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHI 106 + D+S Sbjct: 63 SSRLPFAVGDAKPKMINPDMSSANEP 88 >gi|220905442|ref|YP_002480754.1| OmpA/MotB domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869741|gb|ACL50076.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 235 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 64/200 (32%), Gaps = 4/200 (2%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 TR S + N + + + ++ I+ + Sbjct: 30 PPETRAGLAAYFSGDRNFDSSSTSPVSNNPFIQNTDKIDTRDIKISEVEKSHYAIAQKIK 89 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 L+ + V + + + + + MF + LPE VL + ++ Sbjct: 90 QLLMADSVPQSASGISADDVGVQLRVNSD-IMFKPGTVELLPEGDKVLSSVLSLMEEYNL 148 Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA- 323 + +RGH D+ W LS RA + L + G+ R+ +S + R Sbjct: 149 YLVVRGHADSVEAAPPYASAWELSGARAAAMVNYLAQRGIKATRMRAVS-YGDTRPLKPG 207 Query: 324 -SDPMNSANRRIDILVEDRQ 342 + + NRR++ + Sbjct: 208 IDEQSRAMNRRVEFFFHRPE 227 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 40/75 (53%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 G+WK+ YADF+T +MAFFL++W+++ +T+ + YF+ +++ + + Sbjct: 2 GGAWKVAYADFVTAMMAFFLLLWVLSMVPPETRAGLAAYFSGDRNFDSSSTSPVSNNPFI 61 Query: 90 PERSSQNKIDLSIDE 104 + D+ I E Sbjct: 62 QNTDKIDTRDIKISE 76 >gi|34763583|ref|ZP_00144517.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886747|gb|EAA23886.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 157 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 +I+ + FD S P+ +L+ I E + + I+I GHTD+ N++ Sbjct: 28 TIVLDERSLHFDFDKSNVKPQYYDLLKNIQEFVEQNNYEITIVGHTDSI---GSNAYNFK 84 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS RA S L++ G+SEDRI I + + + NRR++ + R+ Sbjct: 85 LSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 142 >gi|315497454|ref|YP_004086258.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48] gi|315415466|gb|ADU12107.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48] Length = 222 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 10/149 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + + L + V I++++ F S+ VL + Sbjct: 80 QYMDKQQAELRRELAGTNVTVTRNGDNIILNMPSDVT---FGSGSASIDASFYPVLNDVA 136 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + I GH D++ N LS DRA S L GV R+ ++G Sbjct: 137 SILNKYPSTYVDIVGHADST---GSDAINEPLSEDRANSTAAYLTSRGVVNQRLF-VAGM 192 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQ 342 + ++ + NRR++I + Q Sbjct: 193 GSRQPIASNATPEGRAKNRRVEITLRPVQ 221 >gi|258625264|ref|ZP_05720172.1| outer membrane protein OmpA [Vibrio mimicus VM603] gi|258582437|gb|EEW07278.1| outer membrane protein OmpA [Vibrio mimicus VM603] Length = 328 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +S+ P L K+ L + + + GHTD+ N +LS R Sbjct: 215 DSGTFANNSAELKPSMETKLDKLVGYLNQYPQAKVEVVGHTDS---NGSEAYNQKLSEKR 271 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + + L GV RI+ G ++ NRR+++++ Sbjct: 272 AQAVAKALEAQGVDAARITA-KGQDESNPIASNATAEGREKNRRVELVI 319 >gi|222150201|ref|YP_002551158.1| porin [Agrobacterium vitis S4] gi|221737183|gb|ACM38146.1| porin [Agrobacterium vitis S4] Length = 221 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + L A GV I++++ F LP L + Sbjct: 79 YMDNQEAELRAQLQGTGVSVTRQGDRIILNMPSNIT---FPTDQDQVLPPFYPTLNSVAI 135 Query: 258 VLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + ++ + GHTD++ + N LS RA S L GV R+S + GF Sbjct: 136 VLKKFNRTLVDVNGHTDST---GGLQHNQDLSQRRAESVLNYLGSQGVDPRRMSAM-GFG 191 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 + + + NRR+++ + Sbjct: 192 PSQPIATNATPQGRAQNRRVEVAI 215 >gi|293395553|ref|ZP_06639836.1| OmpA family protein [Serratia odorifera DSM 4582] gi|291421872|gb|EFE95118.1| OmpA family protein [Serratia odorifera DSM 4582] Length = 406 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 4/111 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290 + +FD +++ P I V+ +I + + + I + G++D P R+ NW LSL Sbjct: 278 KGDGLFDSAATTVRPAYIPVIDRIAKAMNGVSGKILVTGYSDNLPIRSARFPSNWELSLA 337 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 RA + + L K + R+ G +D + NRR++I + Sbjct: 338 RAEAVSERLQKQLDNPQRVKA-EGRGDSNPVAPNDSKENRALNRRVEITLL 387 >gi|15596974|ref|NP_250468.1| Major porin and structural outer membrane porin OprF precursor [Pseudomonas aeruginosa PAO1] gi|116049726|ref|YP_791468.1| major porin and structural outer membrane porin OprF precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|152985208|ref|YP_001348883.1| outer membrane protein OprF precursor [Pseudomonas aeruginosa PA7] gi|218892271|ref|YP_002441138.1| Major porin and structural outer membrane porin OprF precursor [Pseudomonas aeruginosa LESB58] gi|254234871|ref|ZP_04928194.1| Major porin and structural outer membrane porin OprF precursor [Pseudomonas aeruginosa C3719] gi|254240119|ref|ZP_04933441.1| Major porin and structural outer membrane porin OprF precursor [Pseudomonas aeruginosa 2192] gi|296389835|ref|ZP_06879310.1| Major porin and structural outer membrane porin OprF precursor [Pseudomonas aeruginosa PAb1] gi|313110468|ref|ZP_07796353.1| Major porin and structural outer membrane porin OprF precursor [Pseudomonas aeruginosa 39016] gi|130680|sp|P13794|PORF_PSEAE RecName: Full=Outer membrane porin F; Flags: Precursor gi|9947757|gb|AAG05166.1|AE004603_6 Major porin and structural outer membrane porin OprF precursor [Pseudomonas aeruginosa PAO1] gi|151508|gb|AAA25973.1| porin protein F precursor [Pseudomonas aeruginosa] gi|4186419|gb|AAD11568.1| major outer membrane protein OprF precursor [Pseudomonas aeruginosa PAO1] gi|115584947|gb|ABJ10962.1| major porin and structural outer membrane porin OprF precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|126166802|gb|EAZ52313.1| Major porin and structural outer membrane porin OprF precursor [Pseudomonas aeruginosa C3719] gi|126193497|gb|EAZ57560.1| Major porin and structural outer membrane porin OprF precursor [Pseudomonas aeruginosa 2192] gi|150960366|gb|ABR82391.1| outer membrane protein OprF precursor [Pseudomonas aeruginosa PA7] gi|218772497|emb|CAW28279.1| Major porin and structural outer membrane porin OprF precursor [Pseudomonas aeruginosa LESB58] gi|310882855|gb|EFQ41449.1| Major porin and structural outer membrane porin OprF precursor [Pseudomonas aeruginosa 39016] Length = 350 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272 V + + ++ + FD S + ++ + + + ++ GHT Sbjct: 221 NVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTVEGHT 280 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + VL+ + GV R++ + G+ R + Sbjct: 281 DSV---GTDAYNQKLSERRANAVRDVLVNEYGVEGGRVNAV-GYGESRPVADNATAEGRA 336 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 337 INRRVEAEVEA 347 >gi|75761764|ref|ZP_00741702.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74490749|gb|EAO54027.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 256 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 64 GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 123 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 177 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 3/115 (2%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 + +W I Y+D +T+L A F+V++ +++ D K + F L + Sbjct: 14 HDEHIDETWLIPYSDMLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKE 70 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + + S++ K + + + + + L+ I N +Q Sbjct: 71 FLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 125 >gi|228923254|ref|ZP_04086544.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954780|ref|ZP_04116801.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960776|ref|ZP_04122414.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048216|ref|ZP_04193785.1| OmpA/MotB domain protein [Bacillus cereus AH676] gi|229111973|ref|ZP_04241517.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15] gi|229129795|ref|ZP_04258762.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4] gi|229147069|ref|ZP_04275429.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24] gi|229152704|ref|ZP_04280891.1| OmpA/MotB domain protein [Bacillus cereus m1550] gi|229180776|ref|ZP_04308114.1| OmpA/MotB domain protein [Bacillus cereus 172560W] gi|229192709|ref|ZP_04319668.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876] gi|228590799|gb|EEK48659.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876] gi|228602754|gb|EEK60237.1| OmpA/MotB domain protein [Bacillus cereus 172560W] gi|228630767|gb|EEK87409.1| OmpA/MotB domain protein [Bacillus cereus m1550] gi|228636457|gb|EEK92927.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24] gi|228653711|gb|EEL09582.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4] gi|228671537|gb|EEL26837.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15] gi|228723203|gb|EEL74579.1| OmpA/MotB domain protein [Bacillus cereus AH676] gi|228798911|gb|EEM45887.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804900|gb|EEM51498.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228836460|gb|EEM81811.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 234 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 36 GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 95 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 96 ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 149 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227 Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 3/100 (3%) Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 +T+L A F+V++ +++ D K + F L + + + Sbjct: 1 MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKEFLSDQKPNDEKELSA 57 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S++ K + + + + + L+ I N +Q Sbjct: 58 SSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 97 >gi|326336238|ref|ZP_08202410.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691747|gb|EGD33714.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 278 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 9/156 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 R + + +L G++ + + + + + + +SI D+ +F S P Sbjct: 109 RRDSINLALVQSLKGVLGNLDDQDITIQVDKGVVYVSISDKM---LFSSGSYNVTPRARE 165 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSED 307 VL K+ +V+ + + + GHTD P +N +DNW LS+ RA + ++L GV+ Sbjct: 166 VLGKVAKVVNNKPDFEFMVEGHTDNVPIKNNCIKDNWDLSVLRATAVVRILQNDFGVTPA 225 Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 R++ G + + + + NRR I+V + Sbjct: 226 RMTAA-GRSEYVPVTTNASADGRALNRRTRIVVLPK 260 >gi|78187197|ref|YP_375240.1| OmpA family protein [Chlorobium luteolum DSM 273] gi|78167099|gb|ABB24197.1| OmpA family protein [Chlorobium luteolum DSM 273] Length = 229 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 10/138 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 D V G E I + + +F S+ + ++K+ +L Sbjct: 82 QAAEIDRDVDGARVERVGESIRVVF---DSGILFTTGSATITSTSRYNIEKLARILNRYP 138 Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GHTD+ N LS RA S +L GVS R+S + G+ R Sbjct: 139 DTNMVIEGHTDSI---GSETQNQLLSERRAESVATLLKTYGVSSSRLSPV-GYGETRPVA 194 Query: 323 ASDPM--NSANRRIDILV 338 +++ NRR+++L+ Sbjct: 195 SNETETGRRQNRRVEVLI 212 >gi|254294114|ref|YP_003060137.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814] gi|254042645|gb|ACT59440.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814] Length = 487 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 7/144 (4%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L L + + + ++I N F+ + E+ L K+ V Sbjct: 346 ELDELNGLELRQNGNNLSDVCQDAFALIMDANRIYFETGQATISRESGDTLDKLIAVARR 405 Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 V I + GHTD N RLS RA + L+ G + R+S I G+ + Sbjct: 406 CNNVAIRVEGHTDNV---GGREANVRLSDKRAQAVADYLIGRGYPDYRLSAI-GYGSDKP 461 Query: 321 KIASDP--MNSANRRIDILVEDRQ 342 ++ + NRRI+ +V + Sbjct: 462 AANNETPEGRARNRRIEFIVTSEE 485 >gi|269962960|ref|ZP_06177298.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832322|gb|EEZ86443.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 430 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 10/156 (6%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + ++ D+A++IS L+ ++ + V + + ISI Q +F+ S+ + Sbjct: 279 QTDSQVTDIAERISMYLATEISKGL---VTVDALPDRVRISIKAQD---LFESGSAEVVE 332 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVS 305 V+ K+ L + I + GHTD P + NW LSL RA + + L+ + Sbjct: 333 YIQPVISKLARTLEATEGKILVAGHTDDKPIFTSKYPSNWHLSLARATAMSEQLIANSAL 392 Query: 306 EDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 + R+ G R + + D + NRRI+I + Sbjct: 393 KGRVLP-EGLGDARPLVDNTSDENRALNRRIEIDLM 427 >gi|84501383|ref|ZP_00999588.1| hypothetical protein OB2597_13498 [Oceanicola batsensis HTCC2597] gi|84390674|gb|EAQ03162.1| hypothetical protein OB2597_13498 [Oceanicola batsensis HTCC2597] Length = 467 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 7/147 (4%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 ++++ L A+ V + I I I + MF S PE L+++ Sbjct: 321 EQVTKVAGFLEAEIDQGLVEVFQDNSTITIRI---AGSNMFGSGSDRLQPEFDQPLERVA 377 Query: 257 EVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + L + + + GH+D P R+ N LSL RA S Q L R+ G Sbjct: 378 QALTETEGPVIVVGHSDNVPIRSSRFPSNMHLSLARAESVMQKLAGLIEDPTRLQS-EGR 436 Query: 316 AHHRLKIASDP--MNSANRRIDILVED 340 A +D + NRRI+I++ Sbjct: 437 AAKEPIDTNDTREGRARNRRIEIVLVR 463 >gi|319790576|ref|YP_004152209.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1] gi|317115078|gb|ADU97568.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1] Length = 251 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 78/191 (40%), Gaps = 10/191 (5%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 G + + + + + + +++ A+ R +Q + + + Sbjct: 56 GPSGSNKGERALIGAAAGAVLGGAIGYILQQQAEALGRDLGVQPVDHTNPAVKPQAPVIS 115 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIR 269 + + + + D +F +S+ PE + LQ+I + L + + + Sbjct: 116 DKRPKAVVKEPGRVKVVLKDS---VLFGLNSAELKPEAVKELQRIAQTLKENPKTTVVVV 172 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 G+TD + + N +LS +RA + +VL+++GV +RI + G +D Sbjct: 173 GYTDNT---GSLKYNLKLSKERAEAVKKVLVEAGVRPERIL-VFGCGPKNPIAPNDTPQH 228 Query: 328 NSANRRIDILV 338 + NRR++IL+ Sbjct: 229 RALNRRVEILI 239 >gi|253582681|ref|ZP_04859902.1| outer membrane protein [Fusobacterium varium ATCC 27725] gi|251835551|gb|EES64091.1| outer membrane protein [Fusobacterium varium ATCC 27725] Length = 216 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 51/143 (35%), Gaps = 10/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L V + +++ F SS +P L I VL Sbjct: 78 DRQEQELRERLKNTEVQVSQKGDNLNLNL---PGGVTFATDSSNIVPSFYGPLNSIATVL 134 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E I + G+TD A N LS RA S L++ GVS RIS + G+ Sbjct: 135 VQYPETRIIVNGYTDNV---GSASYNITLSEKRAASVRNYLIQQGVSARRISYV-GYGME 190 Query: 319 RLKIASDPM--NSANRRIDILVE 339 + + + NRR+++ + Sbjct: 191 NPRATNSTAAGRAENRRVELEIL 213 >gi|167034765|ref|YP_001669996.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1] gi|166861253|gb|ABY99660.1| OmpA/MotB domain protein [Pseudomonas putida GB-1] Length = 270 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 94/271 (34%), Gaps = 10/271 (3%) Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 +M + Q + + + + + I Sbjct: 1 MMRRTPLAALAMLVLAAGLQGCASQRSSAALDEAGAAFQKVKDDSDVLRSAPRDVIRAGE 60 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + ++E + + S+ S + ++ L + K+ +++ +L Sbjct: 61 SLARAERLSSYIGTGSDVRHYAYLSQRYSEIASEHAKLALNQERQAKLDLERQRLQLALR 120 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K++S L L+ +FD S+ + K+ Sbjct: 121 EAKLASVQQQGKWVESQIAALASEQTDRGLVM---TLGDVLFDTGSADLKNSASRTVLKL 177 Query: 256 GEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + L + V+ I G+TD++ +A DN +LS DRA S +L+ G+ E R+ ++ G Sbjct: 178 VQFLQLNPRRVVRIEGYTDST---GLAEDNLKLSRDRAQSVADMLVDLGIDEKRL-QVEG 233 Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQG 343 + A+ + NRR++I+ D +G Sbjct: 234 YGDQYPIEANASERGRAQNRRVEIVFSDDKG 264 >gi|56963749|ref|YP_175480.1| motility protein B [Bacillus clausii KSM-K16] gi|56909992|dbj|BAD64519.1| motility protein B [Bacillus clausii KSM-K16] Length = 252 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 76/194 (39%), Gaps = 9/194 (4%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 SE + +E S L+ K +L + + + Sbjct: 57 SETLGGQGILDNQNALDEVDEQARNTLESDPSELSEASKLERSELEQLQARLNGYIEEKQ 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIR 269 + + E +G+LI+I D +F S+ ++I +++++ +LA I I Sbjct: 117 LADRLQTELGASGLLITIND---GILFASGSAELKSDSIELIEQLSAMLASDPPRYIQIS 173 Query: 270 GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM 327 GHTD P N NW LS RAY+ ++ + ++ +G+ + +++ Sbjct: 174 GHTDNVPMGNNEFDSNWELSSARAYNVMKLFFEYDHFEPAQL-SFAGYGEYHPITSNETA 232 Query: 328 NSA--NRRIDILVE 339 NRR+++LV Sbjct: 233 EGRQANRRVEVLVL 246 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 5/130 (3%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 ++ D + +W + YAD +T+L+A F+V++ + D ++ + Sbjct: 5 RRPRRHDSNTHVDETWLLPYADMLTLLVALFIVLFAMGQIDQAKYDQLK-----IVLSET 59 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 +GI D QN + + + + + S ++ Q + Sbjct: 60 LGGQGILDNQNALDEVDEQARNTLESDPSELSEASKLERSELEQLQARLNGYIEEKQLAD 119 Query: 138 QQSEHCKNSL 147 + S Sbjct: 120 RLQTELGASG 129 >gi|27376195|ref|NP_767724.1| hypothetical protein blr1084 [Bradyrhizobium japonicum USDA 110] gi|27349334|dbj|BAC46349.1| blr1084 [Bradyrhizobium japonicum USDA 110] Length = 464 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 + F + P++ +L + E L T I + GHTDA N LS Sbjct: 357 NKGKIRFATKRADIDPDSAGILDHLIETALRCPTTNIDVAGHTDAD---GEDAFNQALSE 413 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 RA + L+K+G+ R + I G+ + +D + + NRRI+ LV Sbjct: 414 KRAQAVIDYLVKAGLPASRFTAI-GYGSTQPVAGNDTDDGKAQNRRIEFLVR 464 >gi|241759693|ref|ZP_04757793.1| inner membrane lipoprotein YiaD [Neisseria flavescens SK114] gi|241319701|gb|EER56097.1| inner membrane lipoprotein YiaD [Neisseria flavescens SK114] Length = 226 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L + E I + + + F S+ + L + Sbjct: 76 YMDYQEKKLRQSLANTNIEVERQGNQIKLVMPENVT---FATGSAALSGQAQSALSVAAQ 132 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +I GHTD + N LS +RA S L GVS R+S G+ Sbjct: 133 TLVQYPDTTLTINGHTDNT---GNDAINEPLSRNRAESVAIFLQSRGVSSTRLSTF-GYG 188 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 + ++ + NRR++IL+ Q Sbjct: 189 SRQPIASNATVEGRAQNRRVEILINPDQ 216 >gi|237654026|ref|YP_002890340.1| OmpA/MotB domain protein [Thauera sp. MZ1T] gi|237625273|gb|ACR01963.1| OmpA/MotB domain protein [Thauera sp. MZ1T] Length = 374 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 73/217 (33%), Gaps = 14/217 (6%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + E ++ + + L + + +N + + + + + L Sbjct: 159 EHKEMSAAAIAQVELLNRQLAAVREQLEQLNAALDAAKLAAKDKDLKLEELGRELNLALA 218 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 L+ ++ + R + I + +F +S + +V L ++ Sbjct: 219 GRVKELARYRSEFFGRLQEVLGKRKDVQIVGDRFVFSSEVLFASASDEVSADGMVQLTRL 278 Query: 256 GEVLA--------HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE 306 E L V+ + GHTD P NW LS RA + + L G+ Sbjct: 279 AETLKTLSADMPKDLPWVLQVDGHTDRRPIATARFPSNWELSTARALAIVKFLRGQGIPP 338 Query: 307 DRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 +R+ +G+ A + NRRI++ + R Sbjct: 339 ERL-AATGYGEFHPLDARSTEEAYTRNRRIELKLTSR 374 >gi|325860437|ref|ZP_08173549.1| OmpA family protein [Prevotella denticola CRIS 18C-A] gi|325482095|gb|EGC85116.1| OmpA family protein [Prevotella denticola CRIS 18C-A] Length = 286 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 14/242 (5%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + + ++ + Q + NN S Q + S + ++ + Sbjct: 31 TENNQLTADYQSAKETIAANNARIKSLEDQLAQARESAAALQGSLDNSLRNANSNNINIS 90 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + + ++ ++ K + L +++ L+ ++ +K V + + + IS+ Sbjct: 91 KLVDQINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSREELKEVDVQVLKGVVYISLA 150 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------R 282 D ++ S L KI +++ + I G+TD P R Sbjct: 151 DNM---LYKSGSYEVNERAEQTLSKIAKIITDYKDYDVLIEGNTDNVPINTANDKMKNIR 207 Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 +NW LS RA S Q L GV+ R++ G + +D NRR I++ Sbjct: 208 NNWDLSCLRAASVVQYLQDRFGVNPKRLTAG-GRGEYNPIATNDTELGKQRNRRTQIIIT 266 Query: 340 DR 341 + Sbjct: 267 PK 268 >gi|306820525|ref|ZP_07454158.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551439|gb|EFM39397.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 437 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 86/262 (32%), Gaps = 17/262 (6%) Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 G N S ++ + + + S++ QY+ + +I + S+ Sbjct: 187 GDGSGQYFNNKAGISLQVDGKGGGQYKDEKNGIVLQVSSDGTGQYKDEKRDISIMVTSED 246 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 S + + + K++N + + + L Sbjct: 247 SATYNYKSGELIISYEGDGVGSYINKALNLTIYNDGQGKADITLNGESITVDAEPLENP- 305 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 G + + I+I + + +FD + + VL K+ +VL Sbjct: 306 -----GRLPKLSPVPAVPPIEANSIMIKL---DSGVLFDVNKYNIRADANDVLMKLIDVL 357 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I GHTD+ N LS +RA S L+K+G++ D GF Sbjct: 358 KKGKIQKFEIYGHTDSDD---TDEYNQVLSENRANSVKDFLVKNGITAD--ITTKGFGEK 412 Query: 319 RLKIASDPMNSA--NRRIDILV 338 + + NRR++I++ Sbjct: 413 KPIATNSTKEGKQLNRRVEIII 434 >gi|319762553|ref|YP_004126490.1| ompa/motb domain protein [Alicycliphilus denitrificans BC] gi|317117114|gb|ADU99602.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC] Length = 240 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ PE L + + + I GHTD+ N +LS+ RA Sbjct: 131 DAFFDFDKSVLKPEGKAKLDDLVSKVKGINLEVIIAVGHTDSI---GTDAYNQKLSVRRA 187 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L+ G+ ++R+ G + + + NRR++I V + Sbjct: 188 EAVKAYLVSKGIEKNRVYT-EGKGEKQPIADNKTKEGRAKNRRVEIEVVGTR 238 >gi|293609016|ref|ZP_06691319.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829589|gb|EFF87951.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 217 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 9/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV G + I+ + FD + S P L K+ + Sbjct: 76 YLDQKEKKLRQQMAGTGVDVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYATLNKVAQ 133 Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 LA + I + G+TD + N LS RA S L GVS RI G+ Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVRSYLASQGVSASRIDA-QGYG 189 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 + + NRR++I + +Q Sbjct: 190 SSNPIADNSTASGREQNRRVEISIYAKQ 217 >gi|295675817|ref|YP_003604341.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] gi|295435660|gb|ADG14830.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] Length = 217 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ FD SS P VL ++ + L + EV+ S+ GHTD + + N LS++ Sbjct: 103 PSSVTFDTSSYAIKPTFAPVLDQLAQTLQQNPEVVASVVGHTDNT---GSLQYNQTLSVN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 RA S L + G++ R+S +G ++ ++ +ANRR++I + Sbjct: 160 RAQSVTGYLTQRGIAPQRLSA-TGMGPNQPIADNNTEAGRAANRRVEIYLRA 210 >gi|221210919|ref|ZP_03583899.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] gi|221169875|gb|EEE02342.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] Length = 218 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 72/177 (40%), Gaps = 8/177 (4%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + K ++ ++ + ++ + ++ L A + GI Sbjct: 44 QLAKFNALEARERTRARLDDAVARTAEPQAPARVPAWVAQLEALKAGGRISLVKAPHGIE 103 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARD 283 I I +F + LP+ + VL++I + L T I + GHTD+ P N Sbjct: 104 IGI---DAGILFHVGDAHLLPDALPVLERIAQALGPHATGDILVEGHTDSVPIANAKYES 160 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 NW LS RA + + + G++ R++ + G A + +A D + NRR+ I V Sbjct: 161 NWELSSARAGAVVRYFAERGIAPHRLAAV-GRADTQPLVAGDDASSRARNRRVTIFV 216 Score = 45.0 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 16/26 (61%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIIN 55 G W I YAD +T LM FL ++++ Sbjct: 19 SGRWLISYADLITTLMVLFLALYVLQ 44 >gi|238792655|ref|ZP_04636287.1| hypothetical protein yinte0001_22390 [Yersinia intermedia ATCC 29909] gi|238728011|gb|EEQ19533.1| hypothetical protein yinte0001_22390 [Yersinia intermedia ATCC 29909] Length = 575 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD S+ + VL + I + GHTD + N LSL Sbjct: 440 DSLSLFDVGQSMLKSGSTKVLINALVGIKAKPGWLIVVAGHTD---ITGDDKSNQALSLK 496 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S + +G + + G+ R ++D NRR++I + Sbjct: 497 RAESVRNWMRDTGDIPESCFAVQGYGQSRPLKSNDTEAGRALNRRVEISL 546 >gi|332970903|gb|EGK09879.1| outer membrane protein OprF [Psychrobacter sp. 1501(2011)] Length = 315 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 90/306 (29%), Gaps = 18/306 (5%) Query: 49 LVMWIIN------ATDDDTKKAIEQ-YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLS 101 +VM I+ + + K + +N G N +D Sbjct: 16 VVMLAISPSTFAETSTEGLIKNMPNVEWNKLGNKPFQIISTNQILDNKVNLIFIRPLDND 75 Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161 E ++D + + Q + ++ + S K + + + Sbjct: 76 GPETSANIAIDGRFQVSLQPGHFSQVRYCSGNHNISIVPTGMKLNDLNTPYNHQVNFAAQ 135 Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 +N P + A + + +S +VA+ Sbjct: 136 QNHYISVDIDNATGQPTLSKIDEAQAQNILATQTEQT--HQISRIVANCPKILEPEIEPE 193 Query: 222 TGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRN 279 + + I N +F+ ++ P + + I GHTD+ Sbjct: 194 PVVKVEIGKPINLEVLFEFDKAVVQPVLNQRSMAVANFMNKYPNTSTIIEGHTDSI---G 250 Query: 280 IARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 A N +LS RA + Q L+ K GV+ +R+ GF R + NRR+ Sbjct: 251 AANYNMKLSQQRAEAVKQELISKYGVNPNRLIT-QGFGETRPVDTNTTEKGRYNNRRVVA 309 Query: 337 LVEDRQ 342 + Q Sbjct: 310 TISAVQ 315 >gi|302670731|ref|YP_003830691.1| flagellar motor protein MotB [Butyrivibrio proteoclasticus B316] gi|302395204|gb|ADL34109.1| flagellar motor protein MotB [Butyrivibrio proteoclasticus B316] Length = 277 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 102/327 (31%), Gaps = 63/327 (19%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 ++ L +W+ + D M +L+ FF++++ + + D + + F+ Sbjct: 3 KKPEEIKPGLPAWQGTFGDLMNLLLCFFVLLFSMASMDAAKFEEVAASFSSAFSIFSGGE 62 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 I + SQ S Sbjct: 63 MAIGKGALIGDGVSQLTELSSYITS----------------------------------- 87 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 L + + + + E L + LA K + L++ Sbjct: 88 ----MGLAQAGDDADEERDAVGEMDQKELMEAAEEEQLEASQKLAEKIQAELEE------ 137 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 +I V T + ++I + + +FD + I V+ K+G++L Sbjct: 138 --------GDIEDVVSLNYTSQFVQLTI---QGSILFDSGKVEIKSDAIPVIDKVGQILE 186 Query: 261 HSTE-VISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316 + I GHTD P +N LS RA + + L+++ + + +G Sbjct: 187 SYAGGTVDIEGHTDNVPMSSGGKYANNDELSSGRALAVFNYLVENTTLDPANLIH-TGRG 245 Query: 317 HHRLKIASDP--MNSANRRIDILVEDR 341 + + S NRR++I + + Sbjct: 246 EYDPIADNSTDEGRSRNRRVEIKIYNP 272 >gi|294508627|ref|YP_003572686.1| chemotaxis motB protein [Salinibacter ruber M8] gi|294344956|emb|CBH25734.1| Chemotaxis motB protein [Salinibacter ruber M8] Length = 263 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 77/237 (32%), Gaps = 9/237 (3%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 ++ + V + Y L SE + Sbjct: 6 MSSDEVGPNTDEDDGDDMPTAPFWMTTYGDIMTLLVTFFVLLISMSEIRMKKFRDAISNF 65 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + R + A++ L L + + + + + GI Sbjct: 66 QRQPGMFSGSKSVVPADYSSGSSQSRARKRAEQYEQFLKRLEERGLGEKIQADLKKEGIH 125 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DN 284 + I D MF + L + VL+++ +L+ + + GHTD P N Sbjct: 126 VVIADSL---MFRTGRARLLKPSRTVLRELANLLSRDVGSVVVSGHTDDRPIGTRKFPSN 182 Query: 285 WRLSLDRAYSAYQVLMKSG--VSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 W LS RA SA + L + R + G A + ++ D + NRR++I+ Sbjct: 183 WELSTARAASAVRFLQERAPEYDSSRFQAV-GHASTDPRASNQTDEGRAKNRRVEIM 238 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 31/101 (30%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 D W Y D MT+L+ FF+++ ++ + F + Sbjct: 18 DDGDDMPTAPFWMTTYGDIMTLLVTFFVLLISMSEIRMKKFRDAISNFQRQPGMFSGSKS 77 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + + + S+ + E K + +G Q Sbjct: 78 VVPADYSSGSSQSRARKRAEQYEQFLKRLEERGLGEKIQAD 118 >gi|167644153|ref|YP_001681816.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31] gi|167346583|gb|ABZ69318.1| OmpA/MotB domain protein [Caulobacter sp. K31] Length = 224 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 51/147 (34%), Gaps = 11/147 (7%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + GV+ I++ + F S P+ VL + Sbjct: 81 NYMDRQQADFRRGLEGSGVMIRRNGDQIVLVMPSDVT---FAVDKSEVQPQFTRVLDDVA 137 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314 L + I GH D+ N LS RA S L G V DR+ ++G Sbjct: 138 RTLNAYPQTTIDIVGHADS---SGPDDYNQTLSERRASSVASYLTNVGRVVPDRVF-VAG 193 Query: 315 FAHHRLKIASDP--MNSANRRIDILVE 339 + ++D + NRR++I++ Sbjct: 194 QGERQPIASNDTPEGRAQNRRVEIILR 220 >gi|313895933|ref|ZP_07829487.1| chemotaxis protein MotB [Selenomonas sp. oral taxon 137 str. F0430] gi|312975358|gb|EFR40819.1| chemotaxis protein MotB [Selenomonas sp. oral taxon 137 str. F0430] Length = 310 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 81/208 (38%), Gaps = 9/208 (4%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 Q++ K + + + P +S K ++L++ Sbjct: 41 QTDASKMQALAQAFTAAFNMGGPSFFSGMGPSTSQTAPSISGNDNGNGAYMKENENLSEA 100 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + ++ V E + G++I + ++ +FD S+ + ++ I + Sbjct: 101 QEKLEQYIKEHDLQDQVSTELSEDGLMIRLKEK---ALFDSGSAALQGQAEQIVPVIAAL 157 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS--GVSEDRISKISGF 315 L E ++I GHTD P NW LS RA S + LM + ++ R S + G+ Sbjct: 158 LTSLPERVTISGHTDNVPIATSQFPSNWELSSARAVSLMRGLMGAQPSLNPARFSAL-GY 216 Query: 316 AHHRLKIASDPM--NSANRRIDILVEDR 341 + +R ++D + NRR+++ + Sbjct: 217 SEYRPIASNDTEEGRAQNRRVEVFIARS 244 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 50/149 (33%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +KK A +W + Y+D MT+L+A F+ ++ ++ TD +A+ Q F Sbjct: 1 MARKKHAKPHEEEVGEAWLLPYSDLMTLLLALFIALFAMSQTDASKMQALAQAFTAAFNM 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + S + D ++ +N + ++ + + Sbjct: 61 GGPSFFSGMGPSTSQTAPSISGNDNGNGAYMKENENLSEAQEKLEQYIKEHDLQDQVSTE 120 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 S+ + + G + + Sbjct: 121 LSEDGLMIRLKEKALFDSGSAALQGQAEQ 149 >gi|244538668|dbj|BAH82822.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 21/199 (10%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + RD K + + ++ P + ++ K + + + K Sbjct: 141 EDLALRVEARDQIKFNNGDHNLISSVGLSFYFGNKTPKAPQLATKQIEEKPQAKQIDKSC 200 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 G + D+I F PE +Q++G+VL Sbjct: 201 PEPRKGALLDHIGCEKTIMLEGH--------------FGFDQITINPEFAQKIQEVGKVL 246 Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + +I GHTD + N +LSL+RA + + L K+GV++++I+ G+ Sbjct: 247 EENPQYYTILEGHTDNT---GPKAYNQKLSLERAKAVAKELEKAGVAKEKITT-KGYGFE 302 Query: 319 RLKIASDP--MNSANRRID 335 + ++D + NRR++ Sbjct: 303 KPIASNDTKEGRAQNRRVE 321 >gi|126724952|ref|ZP_01740795.1| OmpA family protein [Rhodobacterales bacterium HTCC2150] gi|126706116|gb|EBA05206.1| OmpA family protein [Rhodobacterales bacterium HTCC2150] Length = 218 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 10/146 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + + L V +++++ +FD S L K+ Sbjct: 77 QSLDRQAADLEKSLDNDDVSIVNEGDRLVVTLPQD---ILFDVDSDFVSSSLRGDLYKVA 133 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L I I GHTD A N LS RA S +L+ GV+ R+ G Sbjct: 134 NNLNSYPNSTIQIIGHTDN---SGSAAHNQDLSARRAGSVSGILIDGGVAAGRVVSF-GR 189 Query: 316 AHHRLKIASDPM--NSANRRIDILVE 339 + + + NRR++I++ Sbjct: 190 GEDQPVATNLTAEGRAENRRVEIIIL 215 >gi|257485486|ref|ZP_05639527.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331010666|gb|EGH90722.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 271 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 100/248 (40%), Gaps = 12/248 (4%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 + + + S D + + ++ I + ++E + L ++ Sbjct: 26 QDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYL 85 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218 S+ + + N L K+ +++ +L K++S ++ + + Sbjct: 86 SSRYSEIAREHSNLMLSQERLAKMDMERQRLQLALREAKLASAQQQGRWLEDQILSLATT 145 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 146 ETDRGLVMTLGD----VLFDAGRAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 ++N +LS DRA + VLM GV E RI + G+ A+ + NRR++ Sbjct: 200 -GDRQENLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQQFPVNANASERGRAQNRRVE 257 Query: 336 ILVEDRQG 343 I+ D +G Sbjct: 258 IVFSDEKG 265 >gi|90022262|ref|YP_528089.1| OmpA family protein [Saccharophagus degradans 2-40] gi|89951862|gb|ABD81877.1| OmpA/MotB [Saccharophagus degradans 2-40] Length = 225 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + + + FD + + VL + Sbjct: 85 YMDKQEAELRHQLQGTGVQVRREGNNLFLVM---PGNITFDTAQYSIRSQFYEVLDSVAV 141 Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + + GHTD + N LS RA S LM+ GV+ R++ + G+ Sbjct: 142 VLKKYDKTAILVSGHTDNR---GSSDYNQTLSEQRAGSVKAYLMQKGVAAGRVNSV-GYG 197 Query: 317 HHRLKIASDPMNSA--NRRIDILVE 339 + ++D NRR+++ +E Sbjct: 198 YRYPVASNDSAAGREQNRRVELKLE 222 >gi|260890151|ref|ZP_05901414.1| OmpA family protein [Leptotrichia hofstadii F0254] gi|260860174|gb|EEX74674.1| OmpA family protein [Leptotrichia hofstadii F0254] Length = 215 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +S + P+ L + VL + I + GHTD + N LS++RA S Sbjct: 110 FDINSYVIKPQFRNTLDSVATVLKTYPDSTIVVSGHTDTT---GNDAINNPLSINRASSV 166 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 L G+S RI+ GF + ++ + NRR++I + Q Sbjct: 167 ESYLESQGISSSRITS-RGFGSKQPIASNSTEAGRAQNRRVEIAIIANQ 214 >gi|170720329|ref|YP_001748017.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619] gi|169758332|gb|ACA71648.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 237 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLS 288 D + MF S+ + LQ + L I + GHTD N LS Sbjct: 129 DDQGQVMFAFDSADLTAGSQQRLQSLLPRLNELGVSRIKVVGHTDNV---GSDSYNQALS 185 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA S Q L+ G++ +++ G +D + NRR+D+ + Sbjct: 186 ERRAASVAQYLISQGLAPQKVTS-EGRGASEPVAENDTEQGRAQNRRVDLHL 236 >gi|294783612|ref|ZP_06748936.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA] gi|294480490|gb|EFG28267.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA] Length = 141 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 5/131 (3%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 K + ++I+ FD S+ P+ +L + + + + ++I GHT Sbjct: 14 KNIDITNIEAPKEMTIVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQNNYELTIEGHT 73 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330 D+ + N LS RA + L++ G+ EDRI I ++ Sbjct: 74 DSV---GSNQYNIGLSRRRAEAVKAKLIEFGLPEDRIVGIEAKGEEYPVATNETPEGRLQ 130 Query: 331 NRRIDILVEDR 341 NRR++ + R Sbjct: 131 NRRVEFRLVQR 141 >gi|237745869|ref|ZP_04576349.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes HOxBLS] gi|229377220|gb|EEO27311.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes HOxBLS] Length = 218 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 11/149 (7%) Query: 197 KKISSTLSGLVADNIVKGVLFETT-RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + GV T I +SI F +S+ P+ +L+ + Sbjct: 75 NHMEKQKQEMQTATQGTGVEVVQTSDNQIKVSIPSD---VSFATNSATISPQFKTILRDL 131 Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L ++ I++ G+TD + N LS +RA S L+ GV+ +R + G Sbjct: 132 ATTLKNNPSTSITVIGYTDNT---GSDAINQPLSRERAMSVRNYLVSQGVAANRF-TVEG 187 Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDR 341 ++ + NRR++I V +R Sbjct: 188 RGSSDPIASNLTAAGRAENRRVEIYVGER 216 >gi|254482387|ref|ZP_05095627.1| type I secretion outer membrane protein, TolC family, putative [marine gamma proteobacterium HTCC2148] gi|214037392|gb|EEB78059.1| type I secretion outer membrane protein, TolC family, putative [marine gamma proteobacterium HTCC2148] Length = 631 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 89/285 (31%), Gaps = 11/285 (3%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 ++ + FN + + + + I + + +D + + + Sbjct: 348 RQEVTIAFNDVEALERQVEVLQRNLISQDKTRRAYRDQFDIGQRSLLDLLDSQNEYFDTQ 407 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSE---KGKDLCKSTDLEKSINKEENYFLPPL 178 + + ++ + + + K D + + E L P Sbjct: 408 RAHTSAVTDLGVAQARTLANMGLLLAALEMDGLNAEKIAELDLDFTRDGDDENAQALCPQ 467 Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 A+ R L + A + + ++ FD Sbjct: 468 GAPLSAAVDRDALFARLNASADPAAAAASAAALAGLAAGSDRYRAVDGDMVSLEVDVQFD 527 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 +SS+ + + VL + ++ GHTD+ N LS RA + Sbjct: 528 FNSSVISSAYDSEIARSAGVLRENPGVRATVEGHTDS---SGENDYNQWLSERRANAVRD 584 Query: 298 VLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 +L+ + G+S +++ I G +D + NRR++++++ Sbjct: 585 MLINEHGISPEQLVAI-GRGEDYPIAGNDTAEDRARNRRVELVMD 628 >gi|327312584|ref|YP_004328021.1| OmpA family protein [Prevotella denticola F0289] gi|326944583|gb|AEA20468.1| OmpA family protein [Prevotella denticola F0289] Length = 288 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 14/242 (5%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + + ++ + Q + NN S Q + S + ++ + Sbjct: 33 TENNQLTADYQSAKETIAANNARIKSLEDQLAQARESAAALQGSLDNSLRNANSNNINIS 92 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + + ++ ++ K + L +++ L+ ++ +K V + + + IS+ Sbjct: 93 KLVDQINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSREELKEVDVQVLKGVVYISLA 152 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------R 282 D ++ S L KI +++ + I G+TD P R Sbjct: 153 DNM---LYKSGSYEVNERAEQTLSKIAKIITDYKDYDVLIEGNTDNVPINTANDKMKNIR 209 Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 +NW LS RA S Q L GV+ R++ G + +D NRR I++ Sbjct: 210 NNWDLSCLRAASVVQYLQDRFGVNPKRLTAG-GRGEYNPIATNDTELGKQRNRRTQIIIT 268 Query: 340 DR 341 + Sbjct: 269 PK 270 >gi|186470894|ref|YP_001862212.1| type VI secretion system OmpA/MotB family protein [Burkholderia phymatum STM815] gi|184197203|gb|ACC75166.1| type VI secretion system OmpA/MotB family protein [Burkholderia phymatum STM815] Length = 447 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 7/136 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + ++ R MF + ++ KI +A Sbjct: 310 LKDEIAAGTVSVDEDAHHSSVTF---RGDSMFPPGGASVKATMGPLIAKIAAEIARVPGK 366 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +S+ G+TD P R+ N LS +RA Q+L +GV R+ + G + Sbjct: 367 VSVLGYTDNVPIRSRQFASNDALSEERATQVMQILQAAGVPASRLEAV-GKGDADPVADN 425 Query: 325 DP--MNSANRRIDILV 338 + NRR++I V Sbjct: 426 STPQGRAQNRRVEITV 441 >gi|91782349|ref|YP_557555.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans LB400] gi|296162308|ref|ZP_06845102.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] gi|91686303|gb|ABE29503.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans LB400] gi|295887462|gb|EFG67286.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] Length = 217 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 ++ FD +S P VL ++ + + + E + + GHTD++ N LS++ Sbjct: 103 PSSVTFDTNSYAVKPSFAPVLDQLAQTMQQNPELIAQVVGHTDST---GQPAYNQTLSVN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 RA S L + GV+ R+S G + ++ +ANRR++I + Sbjct: 160 RAESVTGYLGQRGVAPQRLSA-QGMGQTQPIADNNTEAGRAANRRVEIYLRA 210 >gi|78221730|ref|YP_383477.1| surface antigen protein [Geobacter metallireducens GS-15] gi|78192985|gb|ABB30752.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Geobacter metallireducens GS-15] Length = 218 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 71/207 (34%), Gaps = 12/207 (5%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + G L ++I + L + + + + K Sbjct: 20 AQPMTRTQTGAALGTGVGAAVGAGLGQAIGRNTESTLIGAAAGALAGGLTGGAIGNYMDK 79 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + VA+ + + + ++ +F +S++ P + ++ +V Sbjct: 80 QEQAMRQAVANVEG--ASIQRDQNVLAVTFKSD---ILFPINSAVLQPGANDEITRVAQV 134 Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L I+I GHTD++ N LS RA + L GV+ R++ I GF Sbjct: 135 LTQYPATTITIAGHTDST---GSDALNQTLSERRATAVKNALAARGVAPARMNAI-GFGK 190 Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342 + + NRR++I + +Q Sbjct: 191 SKPIADNSTEAGRSMNRRVEITIVPQQ 217 >gi|261415986|ref|YP_003249669.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372442|gb|ACX75187.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 700 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 32/239 (13%), Positives = 73/239 (30%), Gaps = 20/239 (8%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 +++ L+ S + + L K + + Sbjct: 462 PIDSDKDGVADYLDQCPNTQSGIAVDGKGCPVDSDNDGVADYLDKCPSTPAGLPVNADGC 521 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 P K+ I+ K + + +D + ++ +D+ Sbjct: 522 SPDSDKDGIVDALDKCPNTPAGVSVDEVGCPVDSDKDGVADHLDKCPNTLVGVAVDKNGC 581 Query: 235 P-------------MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI 280 P F S+ + L I ++L + ++GHTD + Sbjct: 582 PNKNQDLDKLKKGIQFKTGSAKLTASSNKTLNNIAKLLKKLPAVNLEVQGHTDDT---GS 638 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 N +S RA + + L+K G+ +R+ + G+ + + NRR++++ Sbjct: 639 EEKNKTMSEQRAQAVVKYLVKKGIDSERLRAV-GYGSDKPIADNKTKKGRKLNRRVELV 696 >gi|156072292|gb|ABU45468.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327799|gb|ADL27000.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 700 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 32/239 (13%), Positives = 73/239 (30%), Gaps = 20/239 (8%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 +++ L+ S + + L K + + Sbjct: 462 PIDSDKDGVADYLDQCPNTQSGIAVDGKGCPVDSDNDGVADYLDKCPSTPAGLPVNADGC 521 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 P K+ I+ K + + +D + ++ +D+ Sbjct: 522 SPDSDKDGIVDALDKCPNTPAGVSVDEVGCPVDSDKDGVADHLDKCPNTLVGVAVDKNGC 581 Query: 235 P-------------MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI 280 P F S+ + L I ++L + ++GHTD + Sbjct: 582 PNKNQDLDKLKKGIQFKTGSAKLTASSNKTLNNIAKLLKKLPAVNLEVQGHTDDT---GS 638 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 N +S RA + + L+K G+ +R+ + G+ + + NRR++++ Sbjct: 639 EEKNKTMSEQRAQAVVKYLVKKGIDSERLRAV-GYGSDKPIADNKTKKGRKLNRRVELV 696 >gi|126640934|ref|YP_001083918.1| putative outer membrane protein [Acinetobacter baumannii ATCC 17978] gi|169796935|ref|YP_001714728.1| putative outer membrane protein [Acinetobacter baumannii AYE] gi|184157155|ref|YP_001845494.1| outer membrane protein, related peptidoglycan-associated (lipo)protein [Acinetobacter baumannii ACICU] gi|213156662|ref|YP_002318323.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057] gi|215484397|ref|YP_002326628.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii AB307-0294] gi|239503181|ref|ZP_04662491.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii AB900] gi|260555775|ref|ZP_05827995.1| type VI secretion system OmpA/MotB [Acinetobacter baumannii ATCC 19606] gi|301347224|ref|ZP_07227965.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii AB056] gi|301512729|ref|ZP_07237966.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii AB058] gi|301597873|ref|ZP_07242881.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii AB059] gi|332853740|ref|ZP_08434952.1| OmpA family protein [Acinetobacter baumannii 6013150] gi|332871140|ref|ZP_08439738.1| OmpA family protein [Acinetobacter baumannii 6013113] gi|332874156|ref|ZP_08442080.1| OmpA family protein [Acinetobacter baumannii 6014059] gi|126386818|gb|ABO11316.1| putative outer membrane protein [Acinetobacter baumannii ATCC 17978] gi|169149862|emb|CAM87753.1| putative outer membrane protein [Acinetobacter baumannii AYE] gi|183208749|gb|ACC56147.1| Outer membrane protein, related peptidoglycan-associated (lipo)protein [Acinetobacter baumannii ACICU] gi|213055822|gb|ACJ40724.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057] gi|213988304|gb|ACJ58603.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii AB307-0294] gi|260410686|gb|EEX03984.1| type VI secretion system OmpA/MotB [Acinetobacter baumannii ATCC 19606] gi|322507052|gb|ADX02506.1| Putative outer membrane protein [Acinetobacter baumannii 1656-2] gi|323516919|gb|ADX91300.1| Outer membrane protein, related peptidoglycan-associated (lipo)protein [Acinetobacter baumannii TCDC-AB0715] gi|332728426|gb|EGJ59801.1| OmpA family protein [Acinetobacter baumannii 6013150] gi|332731726|gb|EGJ63007.1| OmpA family protein [Acinetobacter baumannii 6013113] gi|332737631|gb|EGJ68534.1| OmpA family protein [Acinetobacter baumannii 6014059] Length = 217 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 52/148 (35%), Gaps = 9/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV G + I+ + FD + S P L K+ + Sbjct: 76 YLDQKEKKLREQMAGTGVEVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYATLDKVAQ 133 Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 LA + I + G+TD + N LS RA S L GV RI G+ Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVKNYLAGKGVPSSRIDA-QGYG 189 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 + + NRR++I + +Q Sbjct: 190 SSNPIADNSTASGREQNRRVEISIYAKQ 217 >gi|301059327|ref|ZP_07200254.1| OmpA family protein [delta proteobacterium NaphS2] gi|300446556|gb|EFK10394.1| OmpA family protein [delta proteobacterium NaphS2] Length = 434 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 60/154 (38%), Gaps = 11/154 (7%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP----MFDKSSSIPLP 246 R Q + I S ++K + + I+ +FD + + P Sbjct: 283 RAQPMGITIESRQCHRGKQALIKNIRIAKGAKNLYDRIMTDGKFVTRGILFDVNKATLKP 342 Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 ++ V+ +I +++ ++ I GHTD+ N +LS +RA + L+ +GV Sbjct: 343 ASMGVINEIAKMMRAHEDINLRIEGHTDSD---GEKTFNQKLSEERAEAVKNALVDAGVD 399 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 R+ GF + + NRR++ + Sbjct: 400 SSRLKT-KGFGESKPVSDNTTAEGKANNRRVEFV 432 >gi|91229460|ref|ZP_01262927.1| flagellar motor protein [Vibrio alginolyticus 12G01] gi|91187396|gb|EAS73750.1| flagellar motor protein [Vibrio alginolyticus 12G01] Length = 186 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 8/146 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + + E I+I + ++ F + S+ P+ ++++I E++ Sbjct: 34 KHQESLEREIEQGAIEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAELVK 90 Query: 261 HSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 ++ + GHTD P + R NW LS RA S Q + K G S R+ ++ G A Sbjct: 91 DVPGIVRVSGHTDNRPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRL-RVRGMADT 149 Query: 319 RLKIASDP--MNSANRRIDILVEDRQ 342 + +D + NRR++I + + Sbjct: 150 EPLLPNDSDDNRALNRRVEISIMQGE 175 >gi|313674928|ref|YP_004052924.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312941626|gb|ADR20816.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 679 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 90/291 (30%), Gaps = 13/291 (4%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + A + + + + E + D + +V Sbjct: 399 MQAVNAAVYVKKIDFKDSSKTRFEDGGYDLTLEGGGEYQIEIVSQDYQDIQEKFIVNVPQ 458 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 +K Y+ + Y+ + + + +S + Sbjct: 459 GTYEYEIRKDYELNKAFKPYVISGIVLDEKSQKALAAELIFEMQDTVLLKTESNSDGTFE 518 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 P + E I+ K+ L + + N + ++I + Sbjct: 519 VTIPKAGELIIRGKKINYLNLEEDILIADNQDFTQYNKQLLMAPIEVGKTVII------D 572 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292 F+ + + L ++ ++++ + + I GHTD+ + N LS RA Sbjct: 573 NIYFNFDKTTLKEASFPELDRLTDLMSQNPGIKIEIIGHTDS---KGSDDYNLILSEGRA 629 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + + L++ G++++R+ G +++ + NRR++ + + Sbjct: 630 QAVMEYLLEKGIAQNRM-TFKGLGETAPISSNNTDEGRAENRRVEFTIVAK 679 >gi|149183513|ref|ZP_01861940.1| flagellar motor protein MotB [Bacillus sp. SG-1] gi|148848785|gb|EDL63008.1| flagellar motor protein MotB [Bacillus sp. SG-1] Length = 253 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 76/200 (38%), Gaps = 12/200 (6%) Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 + NK E + + + + + L+ L +++ ++ Sbjct: 59 VGGTGVMEYPTPVPETDAGDRNKNEEQNSLTVDELEAAKKREMQELKKLQDRVNGYIAA- 117 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEV 265 + + E T G+L++I D +F S++ + + +++ +L + Sbjct: 118 --NELQTQFATELTSEGLLLTIRDN---VLFQSGSAVVGAKDEGIAKELSGLLEMDTPRS 172 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYS-AYQVLMKSGVSEDRISKISGFAHHRLKIA 323 + I GHTD P NW LS+ RA + +L + R GF + + Sbjct: 173 VIISGHTDNVPISTANYESNWELSVMRAVNFMKIILKNQNLDP-RWFSAKGFGEFKPMAS 231 Query: 324 SDP--MNSANRRIDILVEDR 341 +D + NRR+++L+ R Sbjct: 232 NDTSEGRAKNRRVEVLILPR 251 >gi|254785154|ref|YP_003072582.1| OmpA family protein [Teredinibacter turnerae T7901] gi|237683675|gb|ACR10939.1| OmpA family protein [Teredinibacter turnerae T7901] Length = 216 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + S L GV + I + + F S PE VL + + Sbjct: 76 YMDRQESKLRQQLQGSGVQVQRDGNTINLIM---PGNITFATDSFDIKPEFHSVLDSVAQ 132 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL VI + GHTD++ A N +LS +RA S L+ V+ R+ + G+ Sbjct: 133 VLKEFKKTVIVVSGHTDST---GSATYNQQLSENRANSVRSYLLNRSVASGRVQAV-GYG 188 Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342 ++ NRR+++ +E + Sbjct: 189 PRMPIASNKTAQGRQQNRRVELKLEPTE 216 >gi|302878485|ref|YP_003847049.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans ES-2] gi|302581274|gb|ADL55285.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2] Length = 347 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 9/111 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS+ P L ++ + A E ++I GHTD+ + N +LSL RA S Sbjct: 235 FDTSSAKIKPAADKKLNEVVDFAAKYKESNLAISGHTDSR---GSEKLNQKLSLSRAESV 291 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI--LVEDRQ 342 L+K GVS RI+ G A R + + NRR++I +V + + Sbjct: 292 KAYLVKKGVSAARITT-KGEASTRPVADNKTKAGRAQNRRVEINSVVRESK 341 >gi|218886185|ref|YP_002435506.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757139|gb|ACL08038.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 241 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 80/208 (38%), Gaps = 11/208 (5%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 K +L + L S+++ N + L + +K +A+K+ Sbjct: 32 PPETKQALAGYFSTERSLFDSSNVSPVANNPFVQGVDKLDTRDFKVSETEKSHYAIAQKL 91 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + G+ + + ++ + MF S+ +PE VL ++ ++L Sbjct: 92 KQMMMADAIPQNASGISADDVGVLLRVN-----SDVMFKAGSAELVPEGSRVLDEVIKIL 146 Query: 260 AHSTEVISIRGHTDA--SPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316 + +RGH+D+ + NW LS RA +A + +++ G+ R+ I+ +A Sbjct: 147 REYNLYLMVRGHSDSGEVAAGSPYPSNWELSGARAAAAVRYIIEHGGIKPTRLRGIA-YA 205 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 R + S NRR++ + Sbjct: 206 DTRPMEPNTTPESRSKNRRVEFHFHRPE 233 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 1/111 (0%) Query: 28 NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQ 87 GSWK+ YADF+T +MAFFL+MWI+N T +TK+A+ YF+ ++L +S Sbjct: 2 AGGGSWKVAYADFVTAMMAFFLLMWILNMTPPETKQALAGYFS-TERSLFDSSNVSPVAN 60 Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 NP + T+ S Q + N +S Sbjct: 61 NPFVQGVDKLDTRDFKVSETEKSHYAIAQKLKQMMMADAIPQNASGISADD 111 >gi|170722686|ref|YP_001750374.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619] gi|169760689|gb|ACA74005.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 270 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 93/278 (33%), Gaps = 20/278 (7%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F P + A G ++ + + +S L+ + + + L Sbjct: 4 FKPMAALALLALAGGLQGCASQRSAAALDDASVAFQKVKDDSAVLRSAPRDVIRAGESLA 63 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 S ++ + + L S + L + L + Sbjct: 64 RAERLSSYIGTGSDVRHYAYLSQRYSEIAGEHAKLALSQERLAKLDLERQRLQLALREAK 123 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +Q + + + ++ L + +G++ +FD + Sbjct: 124 LASVQQQGEWVEAQIAALASQQADRGLVMT-------------LGDVLFDTGRADLKNSA 170 Query: 249 IVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + K+ + L + V+ I G+ D + DN +LS DRA + +L+ GV E Sbjct: 171 SRTVLKLVQFLQLNPRRVVRIEGYADNT---GAPEDNLKLSRDRAQAVADMLVDLGVDEK 227 Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 R+ ++ G+ A+ + NRR++I+ D +G Sbjct: 228 RL-QVEGYGDQYPIEANASERGRAQNRRVEIVFSDDKG 264 >gi|319793582|ref|YP_004155222.1| type IV / vi secretion system protein, dotu family [Variovorax paradoxus EPS] gi|315596045|gb|ADU37111.1| type IV / VI secretion system protein, DotU family [Variovorax paradoxus EPS] Length = 456 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 65/178 (36%), Gaps = 10/178 (5%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 ++ + ++ ++ R + ++ L + + + + Sbjct: 272 FNLAGNSDGAFAAVNAVRLPQTARAVVMPAPQPRLQRFLEPEIREGL---LTVRDEADRS 328 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARD 283 ++ + R +F S L + VL ++ + L + + G +D P R+ Sbjct: 329 VVVL---RGDGLFASGSDRVLDRYVPVLSRVADALNSVEGNVLVSGFSDDQPIRSVRFPS 385 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 NW+LS RA S ++L +R+ + G +D + NRR+++ + Sbjct: 386 NWQLSQARADSVKKMLAVRITRPERL-RAEGRGDADPLAPNDSPANRARNRRVEVTLL 442 >gi|238757108|ref|ZP_04618295.1| Type VI secretion system OmpA/MotB family protein [Yersinia aldovae ATCC 35236] gi|238704486|gb|EEP97016.1| Type VI secretion system OmpA/MotB family protein [Yersinia aldovae ATCC 35236] Length = 438 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290 + MF S PE + V++++ + + + I GHTD+ P + +N LS Sbjct: 328 KGDTMFQVGSDKVRPEIMSVIERVAQEVHRVQGAVLIIGHTDSMPINKPGFPNNQVLSEK 387 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + + + K+G+ D+I + G + ++D NRR++I V Sbjct: 388 RAANVARFMEKAGIPTDKI-RFEGKGDAQPVSSNDDAAGRSQNRRVEIFV 436 >gi|228903029|ref|ZP_04067168.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222] gi|228967605|ref|ZP_04128628.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228792096|gb|EEM39675.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228856622|gb|EEN01143.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222] Length = 234 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 36 GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINE 95 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 96 ---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGIAKEMSSLLVSASPR 149 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 3/100 (3%) Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 +T+L A F+V++ +++ D K + F L + + + Sbjct: 1 MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR---SELAGGTGNKEFLSDQKPNDEKELSA 57 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S++ K + + + + + L+ I N +Q Sbjct: 58 SSLEAEQAKKQEEARAKEKKEMDELKALQKKIDQYINEKQ 97 >gi|162456349|ref|YP_001618716.1| exported OmpA domain-containing protein [Sorangium cellulosum 'So ce 56'] gi|161166931|emb|CAN98236.1| exported OmpA domain protein [Sorangium cellulosum 'So ce 56'] Length = 610 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 88/307 (28%), Gaps = 24/307 (7%) Query: 49 LVMWIIN--ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106 + M D + I ++ G + P ++ + E Sbjct: 300 VAMAAFTPEQPTDQDRDGIGD-LEDACPSVPGVRSGDPKKNGCPPPPDRDADGIVDAEDA 358 Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 ++ + + + + +++ + + D K D + Sbjct: 359 CPAVAGVRSDDPKKNGCPPPPDRDADGIVDAEDACPAVAGVRSDDPKKNGCPPDRDDDGV 418 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKI--------SSTLSGLVADNIVKGVLFE 218 + E+ + K A R D + + Sbjct: 419 ADAEDACPDVKGVRSKDPAKNGCPRDTDGDTFRDDVDACPREKGFADPDPEKNGCPKAVR 478 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASP 276 T ++I FD + P + +L ++ EVL E++ I GHTD Sbjct: 479 VTEKHVVI-----LQQVQFDTDKATIKPVSDPLLDEVAEVLKEHPEIVLIEIQGHTDNR- 532 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 N LS +RA S L++ G+ R++ G+ + + NRR+ Sbjct: 533 --GTVEHNRILSQNRANSVMAALVRRGIDSTRLTA-QGYGREQPIDDNATEAGRQRNRRV 589 Query: 335 DILVEDR 341 + + Sbjct: 590 QFNIIKK 596 >gi|188581568|ref|YP_001925013.1| OmpA/MotB domain protein [Methylobacterium populi BJ001] gi|179345066|gb|ACB80478.1| OmpA/MotB domain protein [Methylobacterium populi BJ001] Length = 337 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 100/297 (33%), Gaps = 22/297 (7%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + Q L ++ I D + + +N++ ++ + Sbjct: 43 LSQELTGRDAVLNRLNRQIADLTDLLALERSGRRAQEEAAAGLRNTLTATEAERDRLRAL 102 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 S ++ + + + +++ ++ L+ + Sbjct: 103 ADASEAAQGKSADVDAQLAAERGATQRAQNQVEL-LNEQIRALRRQLAALEDALAASESR 161 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTP 235 + + R+ +L +++ L+ V + F I+ S D R + Sbjct: 162 DRESQARIAELGSRLNVALAQRVQELARYRSDFFGRLRQIIGSRTDVRIVGDRFVLQSEV 221 Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWR 286 +F S+ PE L +I + A V+ + GHTDA P ++ NW Sbjct: 222 LFAAGSAALKPEAGPELDRIAGAILDIAKEIPADIPWVLRVDGHTDARPIQSAQFPSNWA 281 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 LS RA + Q L G+ R+ + F + + + + NRRI++ + +R Sbjct: 282 LSAARAIAVVQYLRTKGIPPQRLLAGA-FGEFQPLDSGTSEDAYARNRRIEMKLTER 337 >gi|146343548|ref|YP_001208596.1| putative outer membrane protein (ompA-like) [Bradyrhizobium sp. ORS278] gi|146196354|emb|CAL80381.1| conserved hypothetical protein; putative outer membrane protein (ompA-like) [Bradyrhizobium sp. ORS278] Length = 464 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 83/276 (30%), Gaps = 9/276 (3%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 + L K +E P Q D +V + R Sbjct: 195 EALATALAKLPDGFKVASNEVRAPPYIFQAYKDPVAVTVTLSGNVPDENIHAVVVGSSSR 254 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + N + S + + + + + + A Sbjct: 255 KFFSEKVVDNLKNSVGAPANFVNAVVPALGALSRLSTGTLVVSDRDIKISGDALYDAAAA 314 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + + L + + + V + + + F+ S Sbjct: 315 QIRTGLAKDVPQGWQVKAEITVKPAAAPVDPTVCQQLFSDLLGKAKIR--FETGRSDLDR 372 Query: 247 ETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 ++ +L ++ E+ T + I GHTDA + N LS RA + L+K+G+ Sbjct: 373 DSTGLLDRLVEIAFRCPTANVDIIGHTDAE---GDSAANQVLSQKRAQAVADYLVKAGLP 429 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 DR + I G+ + ++D NRRI+ +V Sbjct: 430 ADRFTPI-GYGSTQPIASNDTAEGRTQNRRIEFVVR 464 >gi|4580973|gb|AAD24560.1|AF117968_1 OprF [Pseudomonas resinovorans] Length = 340 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 30/249 (12%), Positives = 73/249 (29%), Gaps = 18/249 (7%) Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 H + +++ + G + ++ N Sbjct: 106 TPGVGLRPYVSGGFAHQSISNIPDRSGRDHSTFANVGTGLKYYFTENFFAKASLDGMYNL 165 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 D+++ + + + P E ++ K + + Sbjct: 166 DAQESEWMAGVGVGVNFGGSTKQEPAPAPVAEVCADSDNDGVCDNVDKCPDTPAN----- 220 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISI 268 V + + ++ FD + E+ ++ + + + ++ Sbjct: 221 -----VTVDADGCPAVAEVVRVELDVKFDFDKAKVKEESYGDIKNLADFMNQYPATTTTV 275 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM 327 GHTD+ N +LS RA + VL+ GV +R++ + G+ R + Sbjct: 276 EGHTDSV---GTDAYNQKLSERRADAVRDVLVDQYGVGSERVNAV-GYGETRPVADNATA 331 Query: 328 NSA--NRRI 334 + NRR+ Sbjct: 332 DGRAVNRRV 340 >gi|330824570|ref|YP_004387873.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans K601] gi|329309942|gb|AEB84357.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601] Length = 219 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ PE L + + + I GHTD+ N +LS+ RA Sbjct: 110 DAFFDFDKSVLKPEGKAKLDDLVSKVKGINLEVIIAVGHTDSI---GTDAYNQKLSVRRA 166 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L+ G+ ++R+ G + + + NRR++I V + Sbjct: 167 EAVKAYLVSKGIEKNRVYT-EGKGEKQPIADNKTKEGRAKNRRVEIEVVGTR 217 >gi|319787272|ref|YP_004146747.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1] gi|317465784|gb|ADV27516.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1] Length = 226 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L A GV I +++ F +S+ P+ VL + Sbjct: 84 AYQDRQQNALRAKLQGTGVSVTRNGDNITLNM---PGNVTFGFNSANLDPQFYPVLSSVA 140 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 EVL V+ + GHTD+ N RLS RA + Q L+ ++ R + G Sbjct: 141 EVLREYDKTVVEVAGHTDSV---GGDEVNQRLSEQRANAVTQFLVSQNINPQRFITV-GA 196 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 ++D +ANRR++I + Sbjct: 197 GKRYPIASNDTEAGRAANRRVEITL 221 >gi|107101208|ref|ZP_01365126.1| hypothetical protein PaerPA_01002240 [Pseudomonas aeruginosa PACS2] Length = 331 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272 V + + ++ + FD S + ++ + + + ++ GHT Sbjct: 202 NVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTVEGHT 261 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + VL+ + GV R++ + G+ R + Sbjct: 262 DSV---GTDAYNQKLSERRANAVRDVLVNEYGVEGGRVNAV-GYGESRPVADNATAEGRA 317 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 318 INRRVEAEVEA 328 >gi|149279062|ref|ZP_01885196.1| outer membrane protein, OmpA/MotB family [Pedobacter sp. BAL39] gi|149230341|gb|EDM35726.1| outer membrane protein, OmpA/MotB family [Pedobacter sp. BAL39] Length = 439 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 100/313 (31%), Gaps = 45/313 (14%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 FN + AS G + + + T + + + +G + K + Sbjct: 130 DMFNKNNALQLYASAGAGLAGYKVKTGAASSSLTPYANDKTISELIVPVGLGAKFKLSDK 189 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + ++ + N ++ ++K + K++ + P++ A+ Sbjct: 190 INLDLGWTVNFVDGDNLDGVYKEGNDKYSYAYGGLEFSLGAGKQQLAWHNPVALTYDEAL 249 Query: 187 KRKKRLQDLAKKISSTLSG---------------------------------LVADNIVK 213 K K+ L ++ + + V D Sbjct: 250 KAKQTANALKAEVDAQKADNARLRGQIDDLLKDSDDDGVADKLDKCPGTPAGTVVDGSGC 309 Query: 214 GVLFETTRTGILISIIDQR------NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + ++I+ D+R FD ++ ++ L ++ +L + Sbjct: 310 PLKTPAPVEKVIITEADRRVVDEAIKNLEFDLGKAVIRQKSYATLNRVAALLIEKNFSLK 369 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + GHTD + N RLS DRA S L+ G + RI +G+ ++ + Sbjct: 370 LAGHTDNT---GSMALNLRLSKDRAESVKAYLVSQGANASRIEA-TGYGPNQPIATNKTA 425 Query: 328 NSA--NRRIDILV 338 NRR++ + Sbjct: 426 AGRQANRRVEFTL 438 >gi|161521534|ref|YP_001584961.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189352297|ref|YP_001947924.1| chemotaxis MotB protein [Burkholderia multivorans ATCC 17616] gi|160345584|gb|ABX18669.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616] gi|189336319|dbj|BAG45388.1| chemotaxis MotB protein [Burkholderia multivorans ATCC 17616] Length = 219 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 8/170 (4%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 A + ++ + ++ L A + GI I I Sbjct: 52 DARERTRVRLDDAAPARTAEPQAPARVPAWVAQLDALKAGGRISLVQAPHGIEIGI---D 108 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI-ARDNWRLSLD 290 +F + LP+ + VL++I + L I + GHTD+ P N NW LS Sbjct: 109 AGILFHVGDAHLLPDALPVLERIAQALGPHAAGDILVEGHTDSVPIANAKYESNWELSSA 168 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 RA + + L + G++ R++ + G A + +A D + NRR+ I V Sbjct: 169 RAGAVVRYLAERGIAPHRLAAV-GRADTQPLVAGDDASSRARNRRVTIFV 217 Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 36/129 (27%), Gaps = 3/129 (2%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + D G W I YAD +T LM FL ++++ A++ + A Sbjct: 9 RDDEDAEGTQSGRWLISYADLITTLMVLFLALYVLQ---LAKFNALDARERTRVRLDDAA 65 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + Q P + ++ + V G +L Sbjct: 66 PARTAEPQAPARVPAWVAQLDALKAGGRISLVQAPHGIEIGIDAGILFHVGDAHLLPDAL 125 Query: 140 SEHCKNSLT 148 + + Sbjct: 126 PVLERIAQA 134 >gi|91786221|ref|YP_547173.1| Type I secretion outer membrane protein TolC [Polaromonas sp. JS666] gi|91695446|gb|ABE42275.1| Type I secretion outer membrane protein, TolC [Polaromonas sp. JS666] Length = 607 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 74/215 (34%), Gaps = 22/215 (10%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 ++ ++ +T + K D+ + D + + L P + + M++ K Sbjct: 408 QIIAQARTLAGMGQLVTALNVKRGDVPSAQDAGQDRTGIDPAELCPQDETVVDTMEKIKA 467 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + + +T++ + + +FD S Sbjct: 468 GTVIPPRARATVAPAPGQALPAKISLSADT--------------LFDFDKSTIKAGGTGK 513 Query: 252 LQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L + + L + I GHTD+ N RLSL RA S L+ GV RI Sbjct: 514 LDALVDRLKGVNVDVVIAVGHTDSV---GTDAYNQRLSLARADSVKAYLVSKGVDRQRI- 569 Query: 311 KISGFAHHRLKIASDPM--NSANRRIDI-LVEDRQ 342 + G + + + NRR+DI +VE R Sbjct: 570 RTEGRGESQPVADNATAEGRAKNRRVDIEVVEARP 604 >gi|83644388|ref|YP_432823.1| outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] gi|83632431|gb|ABC28398.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] Length = 219 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 10/149 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + S L GV I + + FD + L +G Sbjct: 78 YMDKQESELRHRLEGTGVRVVRNGDEITLVM---PGNITFDTGRAEVKANFYDTLDSVGL 134 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL +I + GHTD++ N RLS RA S + L+ GV R+ I G+ Sbjct: 135 VLKEFDKTIIQVSGHTDST---GSLDLNQRLSEQRAGSVGRYLISQGVLSSRVQTI-GYG 190 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQG 343 + +ANRR+++ + QG Sbjct: 191 PRYPVATNSTTEGRAANRRVELKLVPMQG 219 >gi|332975480|gb|EGK12371.1| OmpA/OmpF family outer membrane protein OprF [Psychrobacter sp. 1501(2011)] Length = 318 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 63/180 (35%), Gaps = 13/180 (7%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + L P S + + + L + +S Sbjct: 136 QPQQTYYYQVSLDPQSNKASINPVEEAVALQLLQGLSEQTHQKNRVEAKDCTTITQETET 195 Query: 224 ILISIIDQRNTP-----MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277 + + NTP +FD S+ P L+++ + L+ + +I GHTD++ Sbjct: 196 VEPPARVEVNTPITLDVLFDFDSAKIKPTYQQRLREVAQFLSANANTKAILEGHTDST-- 253 Query: 278 RNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334 A N LS RA + + L+ K G+ +R++ G+ + + NRR+ Sbjct: 254 -GPASYNLTLSQARAEAVKKELVNKHGIDPNRLTT-QGYGESKPIDNNSTVQGRQNNRRV 311 >gi|325121211|gb|ADY80734.1| OmpA domain protein [Acinetobacter calcoaceticus PHEA-2] Length = 217 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 9/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV G + I+ + FD + S P L K+ + Sbjct: 76 YLDQKEKKLRQQMAGTGVDVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYATLNKVAQ 133 Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 LA + I + G+TD + N LS RA S L GVS RI G+ Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVRSYLASQGVSASRIDA-QGYG 189 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 + + NRR++I + +Q Sbjct: 190 SSNPIADNSTASGREQNRRVEISIYAKQ 217 >gi|262068028|ref|ZP_06027640.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693] gi|291378250|gb|EFE85768.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693] Length = 403 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 10/274 (3%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N + + DE +R+ + V+ + Sbjct: 132 NKTVQTDGNGAGQYADENVTIQRNEDGSGQYTNKVTGVTLQVNPDGSGQFIDTINKFAYQ 191 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + E +T D + + +E +++ Y K K Sbjct: 192 IEADGAGQYVDEKNNVKITIDRKGSIYTNNNITIENNVDGSGTYSDTDKDLLIKNDGKGK 251 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPE 247 + K + I + +I + +FD PE Sbjct: 252 AIITLKGKTTEVEARPFERFEKFPKLKMVPPIPSIEANSLLITLDSGILFDVDKYDVRPE 311 Query: 248 TIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 V L+ + VL + + I GHTD+ N LS +RA + L G++ Sbjct: 312 AEVALKNLAVVLKEADVKAFQIDGHTDSD---ASDEHNQVLSENRANAVKSFLAAQGLTA 368 Query: 307 DRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 + I+G+ R ++D NRR++I++ Sbjct: 369 E--ISINGYGESRPIASNDTAEGKQKNRRVEIII 400 >gi|198276042|ref|ZP_03208573.1| hypothetical protein BACPLE_02226 [Bacteroides plebeius DSM 17135] gi|198271671|gb|EDY95941.1| hypothetical protein BACPLE_02226 [Bacteroides plebeius DSM 17135] Length = 280 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 89/245 (36%), Gaps = 18/245 (7%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 ++ + Q N + + Q + +R + + + Sbjct: 32 GRIEALSRGDKLQGQLNECHNEMDKMRG--QIAQLQQDTSRKGTSIRHYQQLLSSNMNEQ 89 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-------DNIVKGVLFETTR 221 ++ N L KE K + LQ + + ++ + L+ + Sbjct: 90 EKLNALLGEKLKELDEREKTIQELQSMIDQQNAQVQNLLNSVKDALLGFSSDELTVREQN 149 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280 + +++ D+ +F S+ L K+ EVL TE+ I GHTD P Sbjct: 150 GKVYVAMSDKL---LFQSGSAKLDKRGEEALGKLAEVLNKQTEIDVCIEGHTDNKPIHTA 206 Query: 281 AR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 DNW LS+ RA S ++L++ V+ +I + SG ++ + NRR +I Sbjct: 207 QFKDNWDLSVIRATSVVRILIEKYKVNPLQI-QPSGRGEFMPVADNETAEGRAKNRRTEI 265 Query: 337 LVEDR 341 ++ + Sbjct: 266 IMSPK 270 >gi|256846182|ref|ZP_05551640.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2] gi|294784699|ref|ZP_06749987.1| OmpA family protein [Fusobacterium sp. 3_1_27] gi|256719741|gb|EEU33296.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2] gi|294486413|gb|EFG33775.1| OmpA family protein [Fusobacterium sp. 3_1_27] Length = 195 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 56/148 (37%), Gaps = 7/148 (4%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + ++++ + L E + I + D+ FD S P+ +L + Sbjct: 30 KRMRANSIRINALEINKMEALKEEPPEEMTIVLDDRALN--FDFDKSFVKPQYDEMLTNL 87 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 E + + ++I GHTD + + N LS RA + L++ G+ RI I Sbjct: 88 KEFIMKNDYELTIEGHTD---YIASNQYNMGLSKRRAEAVKVKLIELGLDPSRIVAIVPK 144 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDR 341 + + NRR++ + R Sbjct: 145 GEEEPVADNKTTEGRAKNRRVEFKLVKR 172 >gi|291619700|ref|YP_003522442.1| Hypothetical Protein PANA_4147 [Pantoea ananatis LMG 20103] gi|291154730|gb|ADD79314.1| Hypothetical Protein PANA_4147 [Pantoea ananatis LMG 20103] Length = 595 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 6/114 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 I+ + +FD S + +L + I + GHTD + + N Sbjct: 457 IVRLDSMSLFDSGKSALKDGSTKMLVNSLVGIKAKPGWLIIVSGHTDNT---GNPQLNQA 513 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 LSL RA + + +G + + G+ R A+ + NRR++I + Sbjct: 514 LSLKRAEAVRNWMRDTGGVPESCFAVQGYGESRPVAANGTPEGRALNRRVEISL 567 >gi|254428815|ref|ZP_05042522.1| OmpA family protein [Alcanivorax sp. DG881] gi|196194984|gb|EDX89943.1| OmpA family protein [Alcanivorax sp. DG881] Length = 356 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 93/280 (33%), Gaps = 17/280 (6%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 + F I N + DL + + + + + + Sbjct: 90 GVAYAFGDREGFTPFVLAQIGGIYNDVVPDDDDGFDLHANVGLGAVTGPIFDNGLKLRAE 149 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + + ++ ++ + + + R S + T + E Sbjct: 150 ARYMYDDFDGITGTVSEDEGGFNDWRFSLGLEVPLGQTKTVEVEKIVYETREVEKVVEVA 209 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 A + D K +T+ G D +L + N F+ +S+ Sbjct: 210 AADSDGDGIPDNRDKCPNTIQGAKVDGDG----------CLLTNQTITFNNIGFELNSAK 259 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + ++ ++ + L T I GHTD++ A N LS +RA + Q L+ + Sbjct: 260 LTATSRPLVDRLVKALKSQTNFDVEIAGHTDST---GSAEYNETLSDERAKAVRQYLIDN 316 Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 GV+ +R++ G+ +++ + NRR++ V + Sbjct: 317 GVAAERLTA-RGYGEVVPVASNETSSGRAMNRRVEFRVSE 355 >gi|124008054|ref|ZP_01692753.1| peptidoglycan-associated cytoplasmic membrane protein, putative [Microscilla marina ATCC 23134] gi|123986468|gb|EAY26274.1| peptidoglycan-associated cytoplasmic membrane protein, putative [Microscilla marina ATCC 23134] Length = 563 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + +FD +S+ +T+ LQ I ++L + + I HTD DN LS R Sbjct: 458 SHLLFDYNSAKLDDKTLGYLQTIAQLLKKEPQLKLEISAHTDN---HGTHDDNMNLSKQR 514 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 A + + L+K+GV R+S G+ R + + NRR+++ V Sbjct: 515 AQAVKEFLVKAGVDVKRLSA-KGYGETRPLVPNTTVANRERNRRVELKVL 563 >gi|222823421|ref|YP_002574995.1| outer membrane fibronectin-binding protein [Campylobacter lari RM2100] gi|222538643|gb|ACM63744.1| outer membrane fibronectin-binding protein [Campylobacter lari RM2100] gi|244538678|dbj|BAH82830.1| fibronectin-binding protein [Campylobacter lari] gi|244538683|dbj|BAH82834.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 21/199 (10%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + RD K + + ++ P + ++ K + + + K Sbjct: 141 EDLALRVEARDQIKFNNGDHNLISSVGLSFYFGNKTPKAPQLATNQIEEKPQAKQIDKSC 200 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 G + D+I F PE +Q++G+VL Sbjct: 201 PEPRKGALLDHIGCEKTIMLEGH--------------FGFDQITINPEFAQKIQEVGKVL 246 Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + +I GHTD + N +LSL+RA + + L K+GV++++I+ G+ Sbjct: 247 EENPQYYTILEGHTDNT---GPKAYNQKLSLERAKAVAKELEKAGVAKEKITT-KGYGFE 302 Query: 319 RLKIASDP--MNSANRRID 335 + ++D + NRR++ Sbjct: 303 KPIASNDTKEGRAQNRRVE 321 >gi|312130013|ref|YP_003997353.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132] gi|311906559|gb|ADQ17000.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132] Length = 622 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 7/113 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 + + FD S+ PE+ + L+K+ +L + + + I GHTD + N LS Sbjct: 514 ETLDNIFFDTGSAAIRPESEIELKKVVTLLKENPDLKVEISGHTDDV---GNDKANMNLS 570 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 + RA + + L G+ R+ G+ + K+ +D NRRI++ V Sbjct: 571 IQRANAVVEYLKGKGIHTQRLVA-KGYGESQPKVKNDSDKNRQLNRRIELKVL 622 >gi|154174678|ref|YP_001407584.1| outer membrane fibronectin-binding protein [Campylobacter curvus 525.92] gi|112803800|gb|EAU01144.1| outer membrane fibronectin-binding protein [Campylobacter curvus 525.92] Length = 337 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 9/124 (7%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273 V+ + T +I + D F S P ++K+ + + E + GHTD Sbjct: 215 VVVDETGCEKVIVLRDLDVN--FAFDSYKVGPGYAAEIKKVADFMGEHPEYRVVLAGHTD 272 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331 + N +LS RA + +VL GV + +IS I G+ R + + N Sbjct: 273 SV---GKEAYNQKLSEKRAKAVAEVLEGYGVEKKKISTI-GYGELRPIATNSTKEGRAQN 328 Query: 332 RRID 335 RR++ Sbjct: 329 RRVE 332 >gi|261417272|ref|YP_003250955.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373728|gb|ACX76473.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 294 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 92/245 (37%), Gaps = 16/245 (6%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 + + T N+++ ++ K N + + + ++ + K Sbjct: 55 EGYGTLNALETIYADDDESKLIPTFLENCKKYAEIAKLQGETQAIQNHIAENW--EKRAA 112 Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV---KGVLFET 219 ++I + S + K+ ++ K+ ++ + + + + Sbjct: 113 TNRTIEAIQEQIGEARSGKVSDLEAEKQAIKAQKDKLEASKNEAMDKLNALQSQMIQVTK 172 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR 278 GI++S+ D +FD + + + L KI +L+ + SI G+TD + Sbjct: 173 DARGIILSMSD----ILFDVGRATLKTDLMTSLAKIAGILSVYQQFDVSIEGNTDNT--- 225 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 N LS RA + + L++ G++E R++ G + NRR+D+ Sbjct: 226 GSEEFNMTLSQQRAENVMKFLVEQGIAETRLTA-KGLGMTMPIADNSTKEGRQKNRRVDL 284 Query: 337 LVEDR 341 ++ DR Sbjct: 285 VITDR 289 >gi|193215633|ref|YP_001996832.1| OmpA/MotB domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193089110|gb|ACF14385.1| OmpA/MotB domain protein [Chloroherpeton thalassium ATCC 35110] Length = 398 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + PE+I + +I ++ ++ + GHTD+ A N LS RA S Sbjct: 297 FDVGKATLRPESIGPINEIYSLMKAHADIKFSVEGHTDSD---GDASSNQTLSEQRAKSV 353 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 L++ G+S DR+ GF + +D NRR++ + Sbjct: 354 MDELIRMGISADRLK-FKGFGESKPVDTNDTPEGKANNRRVEFV 396 >gi|325105244|ref|YP_004274898.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] gi|324974092|gb|ADY53076.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] Length = 285 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 9/152 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 L +++ L+ ++ ++ V + + + IS+ D ++ S L Sbjct: 121 DSLNLVLTNNLTRSLSREELRDVDIQVLKGVVYISLADNM---LYKSGSYEISDRADQTL 177 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRI 309 KI +++ I G+TD P R+NW LS+ RA S Q L K GV R+ Sbjct: 178 SKIAKIIKDYKNYGVLIEGNTDNVPISQTNIRNNWDLSVLRASSVVQSLQTKYGVDPKRL 237 Query: 310 SKISGFAHHRLKIASDPMNS--ANRRIDILVE 339 + G + + NRR I++ Sbjct: 238 TAG-GRGEYNPVAPNSTEEGKSKNRRTQIIIT 268 >gi|160899279|ref|YP_001564861.1| hypothetical protein Daci_3845 [Delftia acidovorans SPH-1] gi|160364863|gb|ABX36476.1| type IV / VI secretion system protein, DotU family [Delftia acidovorans SPH-1] Length = 443 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 67/178 (37%), Gaps = 10/178 (5%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 ++ + +++ + + L ++ L + + + V Sbjct: 252 YRLSNSSDDLFAAINEIRFPRTSAAATVATLKPRLRQFLEPEIREGL---VSVRDEADRS 308 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-D 283 + + R +FD ++++ P + V+ ++ L + + G+TD P R Sbjct: 309 TVIL---RGDGLFDPAATVVKPRYVQVIHRVAAALDEVPGKVVVNGYTDNLPIRTARFPS 365 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 NW LS +RA + Q+L S R+ G A ++ NRR++I++ Sbjct: 366 NWNLSQERAQAVSQMLGGSLRDRQRLHA-EGRADSDPVAPNNTAEGRALNRRVEIVLL 422 >gi|146307342|ref|YP_001187807.1| hypothetical protein Pmen_2317 [Pseudomonas mendocina ymp] gi|145575543|gb|ABP85075.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 453 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 7/136 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L D + V E +++I +F S+ +L +I E + Sbjct: 316 LEDDIRAQRVAVEDAVDRSVVTIRGDE---LFASGSASISDNLQPLLLRIAEAIRQVKGN 372 Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + + GH+D P NW+LS DRA VL +R + G + ++ Sbjct: 373 VLVTGHSDDRPIATLRYPSNWKLSQDRAQQVMDVLAARSGQPERFTA-EGRSDTEPVASN 431 Query: 325 DPM--NSANRRIDILV 338 + + NRR++I V Sbjct: 432 ESAAGRARNRRVEITV 447 >gi|244538673|dbj|BAH82826.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 21/199 (10%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + RD K + + ++ P + ++ K + + + K Sbjct: 141 EDLALRVEARDQIKFNNGDHNLISSVGLSFYFGNKTPKAPQLATNQIEEKPQAKQIDKSC 200 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 G + D+I F PE +Q++G+VL Sbjct: 201 PEPRKGALLDHIGCEKTIMLEGH--------------FGFDQITVNPEFAQKIQEVGKVL 246 Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + +I GHTD + N +LSL+RA + + L K+GV++++I+ G+ Sbjct: 247 EENPQYYTILEGHTDNT---GPKAYNQKLSLERAKAVAKELEKAGVAKEKITT-KGYGFE 302 Query: 319 RLKIASDP--MNSANRRID 335 + ++D + NRR++ Sbjct: 303 KPIASNDTKEGRAQNRRVE 321 >gi|315186378|gb|EFU20138.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578] Length = 239 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 59/164 (35%), Gaps = 12/164 (7%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 ++ +R + L + +S + K V + G++I++ F +S+ Sbjct: 76 SLPSMERGRALDQARKKAISAFQPEIRAKTVRVKQDERGLVITLAAD---AFFRSASAEL 132 Query: 245 LPETIVVLQKIGEVLAHSTE----VISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQV 298 E L S E I I GHTD P NW LS RA + Sbjct: 133 NIEAARETLIKLSNLLTSPELEGRKIRIEGHTDDVPTDPAGPWPSNWELSSARAINVLHF 192 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L GV E+ ++ G A + NRRIDI++ Sbjct: 193 LSDYGVDENHF-QVMGLADTVPLADNSTPEGRAYNRRIDIVILS 235 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 19/49 (38%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + + Y D +T+L+ FF++M+ D + I F Sbjct: 2 QKKKKCDEGAPDYMLTYGDMVTLLLTFFVMMFTTATIDGYQLRLILSAF 50 >gi|149774748|gb|ABR28420.1| OmpA/MotB [Delftia tsuruhatensis] Length = 219 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ PE L + + + I GHTD+ N +LS+ RA Sbjct: 109 DAFFDFDKSVLKPEGKAKLDDLASKVKGINLEVVIAVGHTDSV---GSDAYNQKLSVRRA 165 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L+ G+ ++R+ G + + + NRR++I V + Sbjct: 166 EAVKAYLVSKGIEKNRVYT-EGKGEKQPIADNKTKEGRAKNRRVEIEVVGTR 216 >gi|160900150|ref|YP_001565732.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1] gi|151500323|gb|ABS12102.1| OmpA/MotB [Delftia acidovorans] gi|160365734|gb|ABX37347.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1] Length = 219 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ PE L + + + I GHTD+ N +LS+ RA Sbjct: 109 DAFFDFDKSVLKPEGKAKLDDLASKVKGINLEVVIAVGHTDSV---GSDAYNQKLSVRRA 165 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L+ G+ ++R+ G + + + NRR++I V + Sbjct: 166 EAVKAYLVSKGIEKNRVYT-EGKGEKQPIADNKTKEGRAKNRRVEIEVVGTR 216 >gi|320529440|ref|ZP_08030528.1| putative flagellar motor protein MotB [Selenomonas artemidis F0399] gi|320138406|gb|EFW30300.1| putative flagellar motor protein MotB [Selenomonas artemidis F0399] Length = 310 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 81/208 (38%), Gaps = 9/208 (4%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 Q++ K + + + P +S K ++L++ Sbjct: 41 QTDASKMQALAQAFTAAFNMGGPSFFSGMGPSTSQTAPSISGNDNGNGAYMKENENLSEA 100 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + ++ V E + G++I + ++ +FD S+ + ++ I + Sbjct: 101 QEKLEQYIKEHDLQDQVSTELSEDGLMIRLKEK---ALFDSGSAALQGQAEQIVPVIAAL 157 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKS--GVSEDRISKISGF 315 L E ++I GHTD P NW LS RA S + LM + ++ R S + G+ Sbjct: 158 LTSLPERVTISGHTDNVPIATSQFPSNWELSSARAVSLMRGLMGAQPSLNPARFSAL-GY 216 Query: 316 AHHRLKIASDPM--NSANRRIDILVEDR 341 + +R ++D + NRR+++ + Sbjct: 217 SEYRPIASNDTEEGRAQNRRVEVFIARS 244 Score = 52.7 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 50/149 (33%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +KK A +W + Y+D MT+L+A F+ ++ ++ TD +A+ Q F Sbjct: 1 MARKKHAKPHEEEAGEAWLLPYSDLMTLLLALFIALFAMSQTDASKMQALAQAFTAAFNM 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + S + D ++ +N + ++ + + Sbjct: 61 GGPSFFSGMGPSTSQTAPSISGNDNGNGAYMKENENLSEAQEKLEQYIKEHDLQDQVSTE 120 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 S+ + + G + + Sbjct: 121 LSEDGLMIRLKEKALFDSGSAALQGQAEQ 149 >gi|325954634|ref|YP_004238294.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] gi|323437252|gb|ADX67716.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] Length = 234 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 8/142 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + ++ G T GI + + + + FD +S + L K+ +V Sbjct: 86 QAEKIEQVLPGAEVVRTDEGINLILNENSS-VTFDYNSENLTSKAKNSLDKLIQVFKEYP 144 Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I GHTD N LS RA S L+ G+S R++ G Sbjct: 145 DTNLLIVGHTDNV---GSQNFNLPLSEKRAKSVVNYLVSKGISSSRLTS-KGVGLSEPIA 200 Query: 323 ASDPM--NSANRRIDILVEDRQ 342 + + NRR++I + + Sbjct: 201 DNSTAAGRAQNRRVEIAITANE 222 >gi|322436615|ref|YP_004218827.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] gi|321164342|gb|ADW70047.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] Length = 531 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 89/278 (32%), Gaps = 11/278 (3%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 ++L AS + + + K + Q+ Sbjct: 249 DTMASAKQDLKNASDIDSGKHRDVKMEITYARQAVQRAEDARVDTLRKKAAERQRNAEIA 308 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + SQ + S + + + + L ++ K L Sbjct: 309 KNDAQQQAAQSQAQAEAARLAEQKSALDAQKSQLAAQQAQLAQANADALAAQARNKELEA 368 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 ++ + + + + + + + + T G+++++ D +FD Sbjct: 369 NQRADAANKRAESAEQMRERLRAQLNEVLQTTETSRGVIVNLSD----ALFDTGKYTLKT 424 Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 T V L ++ +L + + G+TD N RLS +RA + ++K GV Sbjct: 425 NTQVSLARVAGILQSYPGLKVQVEGYTD---IVGSDALNQRLSENRANTTRDFMVKQGVP 481 Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 D IS G+ + + NRR++++V Sbjct: 482 TDSISAA-GYGKADPVADNGTAAGRAQNRRVELVVSGD 518 >gi|302035624|ref|YP_003795946.1| hypothetical protein NIDE0237 [Candidatus Nitrospira defluvii] gi|300603688|emb|CBK40019.1| exported protein of unknown function [Candidatus Nitrospira defluvii] Length = 513 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 55/136 (40%), Gaps = 10/136 (7%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTD 273 E I++ D + +D P + +L+++ E L + + + GH+D Sbjct: 300 RVERAHGSTRINLDDLADQLEYDSGEVKVKPAGVPILEQLAEYLRTAAGSQQVRVEGHSD 359 Query: 274 ASPFR----NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328 + NW LS RA + L++ G+ ++S + G+ R + Sbjct: 360 NMEIGPSLKGVFPTNWELSKARAAEIVRYLIEKGGMDSAKLSAV-GYGASRPVAGNGTEE 418 Query: 329 SA--NRRIDILVEDRQ 342 NRRI+++++ + Sbjct: 419 GRKKNRRIEVVLDSPE 434 >gi|304438419|ref|ZP_07398359.1| flagellar motor protein MotB [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368502|gb|EFM22187.1| flagellar motor protein MotB [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 306 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 80/210 (38%), Gaps = 9/210 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 SQ +L + ++ + + K DL+ Sbjct: 40 SQTDASKMQALAQAFTAAFNMGGPSFFSGMGPSTSMSSATVTTGADTADAAYMKENNDLS 99 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + + +N+ V E G++I + ++ +F S+ + ++ I Sbjct: 100 EAKAKLDQYIQENNLQDQVSTELNEEGLMIRLKER---ALFASGSAALQGDAERIVPVIA 156 Query: 257 EVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ--VLMKSGVSEDRISKIS 313 VL+ E ++I GHTD P NW LS RA S + + ++ ++ R S + Sbjct: 157 GVLSSLPERVTISGHTDNVPIATAQYPSNWELSSARAVSLMRGVMAVQPSLNPARFSAL- 215 Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341 G++ +R ++D + NRR+++ + Sbjct: 216 GYSEYRPIASNDTEEGRAQNRRVEVFIARS 245 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 48/153 (31%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +KK A +W + Y+D MT+L+A F+ ++ ++ TD +A+ Q F Sbjct: 1 MARKKHAKPHEEEAGEAWLLPYSDLMTLLLALFIALFAMSQTDASKMQALAQAFTAAFNM 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + ++ + D K + DL + Q + Sbjct: 61 GGPSFFSGMGPSTSMSSATVTTGADTADAAYMKENNDLSEAKAKLDQYIQENNLQDQVST 120 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 + R D E+ + Sbjct: 121 ELNEEGLMIRLKERALFASGSAALQGDAERIVP 153 >gi|239813231|ref|YP_002942141.1| hypothetical protein Vapar_0212 [Variovorax paradoxus S110] gi|239799808|gb|ACS16875.1| type IV / VI secretion system protein, DotU family [Variovorax paradoxus S110] Length = 460 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 87/296 (29%), Gaps = 22/296 (7%) Query: 47 FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106 FF ++ + + + + D + + ++ I + Sbjct: 167 FFQLL-SRLVQNPQQHLQLIELIYFCLAMGFEGRFRVIDNGRTQLETLKQRLLQIIRQTR 225 Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 + +V L + +R N L + + + Sbjct: 226 GEIAVPLSPHWQDASAPVRRTRN----WVPLWAVGAVAAVLLVLVFGVLTFSLAGRSDGA 281 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 LP + +A + RLQ + V D + V+ Sbjct: 282 FAAVNAVRLPQTQRAVAVAPAPQPRLQRFLEPEIRDGLLTVRDEADRSVVVLR------- 334 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNW 285 +F S L VL ++ + L + + G +D P R+ NW Sbjct: 335 ------GDGLFASGSDRVLDRYAPVLARVADALNSVEGNVLVSGFSDDQPIRSVRFPSNW 388 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 +LS RA + +++ +R+ + G + +D + NRR+++ + Sbjct: 389 QLSQARADAVKKMIATRVTRPERL-RAEGRGDADPLVPNDSPANRARNRRVEVTLL 443 >gi|238783322|ref|ZP_04627346.1| hypothetical protein yberc0001_32980 [Yersinia bercovieri ATCC 43970] gi|238715745|gb|EEQ07733.1| hypothetical protein yberc0001_32980 [Yersinia bercovieri ATCC 43970] Length = 403 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 10/139 (7%) Query: 210 NIVKGVLFETTRTGILISIIDQ------RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 N+ + E +++ D+ R +FD P V+ IG L + Sbjct: 252 NLANFLQEEIASGMVVVRTDDKQSVIALRGDGLFDSGMITIRPAYNQVINHIGNALNGVS 311 Query: 264 EVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I + G++D P ++ N LSL RA + L K + + K G Sbjct: 312 GKIMVTGYSDNVPIRKSTFTSNSALSLARANAVGSQLQKY-LDSAQRVKTEGRGEANPVA 370 Query: 323 ASDPM--NSANRRIDILVE 339 +D + NRR++I + Sbjct: 371 PNDSKKDRALNRRVEITLL 389 >gi|226951234|ref|ZP_03821698.1| OmpA/MotB domain-containing protein [Acinetobacter sp. ATCC 27244] gi|226838028|gb|EEH70411.1| OmpA/MotB domain-containing protein [Acinetobacter sp. ATCC 27244] Length = 213 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + FD + S P L K+ +VL + I + G+TD + N LS Sbjct: 104 PGSITFDTNKSNIKPNFYATLNKVAQVLGEDNQSAILVTGYTDNT---GNDSINIPLSQA 160 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA S L G++ +RI G+ + NRR++I + +Q Sbjct: 161 RAQSVKNYLAGKGIASNRIDA-QGYGSSNPIADNSTAAGREQNRRVEISIYAKQ 213 >gi|110638537|ref|YP_678746.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110281218|gb|ABG59404.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 510 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 9/135 (6%) Query: 212 VKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SI 268 + + + I + N F+ S LPE+ L K+ ++L + ++ I Sbjct: 380 NEYIEITRDYYLVPIEVGQSIKLNHIYFETSKYDLLPESYYELDKVVKLLRENPKMKIEI 439 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-- 326 GHTD A N LS +RA S ++ G++ DRI+ GF + + +D Sbjct: 440 EGHTDNQ---GNADKNMILSQNRAKSVMDYIISKGITADRITS-KGFGITKPMVDNDTPE 495 Query: 327 MNSANRRIDILVEDR 341 NRR++ + + Sbjct: 496 NRQLNRRVEFTILQK 510 >gi|332308557|ref|YP_004436408.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175886|gb|AEE25140.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 215 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 10/148 (6%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + + + GV + + + + F ++ VL+ Sbjct: 69 AIGNYMDRQEEEFREELADSGVEVYREGDVLRLYM---PGSITFSSGNASVDSSFFPVLK 125 Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + V+ + + GHTD + N RLS RA S L+++GV R+S + Sbjct: 126 DVALVINKYEKTTLMVEGHTDNT---GADDMNQRLSEARANSVKNYLVQNGVDNRRVSTL 182 Query: 313 SGFAHHRLKIASDP--MNSANRRIDILV 338 G + + NRR+++ + Sbjct: 183 -GMGEYTPIADNTTQAGRQKNRRVELKI 209 >gi|328948405|ref|YP_004365742.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489] gi|328448729|gb|AEB14445.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489] Length = 240 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 12/160 (7%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248 ++ + L + +S + + + G++IS+ F++ S+ E Sbjct: 82 EKGRALGPAMKKAISSFAPEVKSNKITITSDERGLVISLASDT---FFEEGSAELNIEEA 138 Query: 249 IVVLQKIGEVLAHST---EVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSG 303 L + + A I GHTD P NW S RA + L G Sbjct: 139 RGTLINLAKFFASPEVAGRRWRIEGHTDNRPVPASSIYPSNWEFSAARAANVLHYLADFG 198 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 V E + I+G+A R K+++D NRR+D++V D Sbjct: 199 VDEQQF-SIAGYADTRPKLSNDTAEGRAYNRRVDVIVLDD 237 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 34/107 (31%), Gaps = 4/107 (3%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + +W Y D +T+++ FF++++ + +D A++ N Sbjct: 3 KREKKEPAKPSTAWMGTYGDMITLMLCFFVMLYDPSESDAVQMAALQASL----SNNNPG 58 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 + + SI++ K S+ + Sbjct: 59 GGISVSPGSLANLGNVVSSLPSIEKGRALGPAMKKAISSFAPEVKSN 105 >gi|257457774|ref|ZP_05622935.1| OmpA family protein [Treponema vincentii ATCC 35580] gi|257444824|gb|EEV19906.1| OmpA family protein [Treponema vincentii ATCC 35580] Length = 434 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 10/149 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +KI L + D + E T GI IS+ F+ S+ LP L+KI Sbjct: 293 KEKIVEILDKNIRDMGIPNTTVERTDEGITISL----ENIQFEPDSARLLPAEKEKLKKI 348 Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 G++LA + + I GHT A D LS RA + L++ GV E G Sbjct: 349 GDILASYPDYELLISGHT---ALAGRAEDRQVLSEQRASAVANYLIELGVREKHHIFTRG 405 Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDR 341 F + + + NRR++I V ++ Sbjct: 406 FGAEKPIAPNTTEANKARNRRVEITVLEK 434 >gi|261380477|ref|ZP_05985050.1| OmpA family protein [Neisseria subflava NJ9703] gi|284796724|gb|EFC52071.1| OmpA family protein [Neisseria subflava NJ9703] Length = 226 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 51/148 (34%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L + E I + + + F S+ L + Sbjct: 76 YMDYQEKKLRQSLANTNIEVERQGNQIKLVMPENVT---FATGSAALSGHAQSALSAAAQ 132 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +I GHTD + N LS +RA S L GVS R+S G+ Sbjct: 133 TLVQYPDTTLTINGHTDNT---GNDAINEPLSRNRAESVATFLQSRGVSSTRLSTF-GYG 188 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 + ++ + NRR++IL+ Q Sbjct: 189 SRQPIASNATVEGRAQNRRVEILINPDQ 216 >gi|171057646|ref|YP_001789995.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6] gi|170775091|gb|ACB33230.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6] Length = 243 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD + P+ L + + + I GHTD+ N +L ++RA Sbjct: 132 DAFFDTGKFVLKPDAASKLDDLVSKVKDINLEVIIAVGHTDSD---GSDAYNQKLGVNRA 188 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 + + L+ GV ++R+ G + + + NRR++I V + Sbjct: 189 EAVKKYLVSKGVEQNRVYT-EGKGEKQPVADNGTKEGKAKNRRVEIEVVGTR 239 >gi|146281506|ref|YP_001171659.1| OmpA family protein [Pseudomonas stutzeri A1501] gi|145569711|gb|ABP78817.1| OmpA family protein [Pseudomonas stutzeri A1501] gi|327479683|gb|AEA82993.1| OmpA family protein [Pseudomonas stutzeri DSM 4166] Length = 217 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 7/111 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290 F +S+ L + +V + + I GHTD++ + N LS Sbjct: 109 PGNITFASNSADISSSFYPTLNSLVQVFKEFNKNGVDIVGHTDST---GSLQLNQDLSNR 165 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 RA S L+ +GV+ RIS G + ++D + NRR++I + Sbjct: 166 RAQSVASYLIANGVAPARISSY-GAGPSQPIASNDTAAGRAQNRRVEINLR 215 >gi|330503720|ref|YP_004380589.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] gi|328918006|gb|AEB58837.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] Length = 262 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 79/240 (32%), Gaps = 13/240 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + D + T + Q L ++ + D G+ L D + Sbjct: 26 TPTGAADARHRLTQLQNDPQLASRIPVSLKAAETAVLAAEQPRTDEVVGQHLVVMADRKV 85 Query: 166 SINKEEN-YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTG 223 I + + ++ + RL ++ V + G+ E T G Sbjct: 86 EIARARALERFYEDQRRQLGEQRESARLDSRTREADQAQQRNVDLQRQIDGLNAEETERG 145 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 +L+++ D +F + L + + L E +I GHTD Sbjct: 146 LLVTLGD----LLFASGRAELNGNANHNLATLTDFLNRHPERTVTIEGHTDNV---GSES 198 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 N+ LS RA S L G++ R+ SG +D NRR++I++ + Sbjct: 199 ANFGLSQRRADSVKSHLQSQGIAASRLLA-SGMGEGSPVAGNDSAEGRQLNRRVEIIISN 257 >gi|254457130|ref|ZP_05070558.1| OmpA/MotB [Campylobacterales bacterium GD 1] gi|207085922|gb|EDZ63206.1| OmpA/MotB [Campylobacterales bacterium GD 1] Length = 407 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ +S + + +++K + L + + I G+TD+ + A N +LS RA + Sbjct: 304 FENNSDVVNTSSYDIIEKYADFLNNYSSYSAKIIGYTDS---KGSANYNQKLSEKRANAI 360 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 +L++ GV DR+S + G + + NRRI+ + + Sbjct: 361 KSMLLEKGVPADRLSSV-GMGESNPVADNSTKEGRAQNRRIEAELTKK 407 >gi|163856192|ref|YP_001630490.1| outer membrane protein A precursor [Bordetella petrii DSM 12804] gi|163259920|emb|CAP42221.1| outer membrane protein A precursor [Bordetella petrii] Length = 193 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L ++ + I GHTD+ + N LS RA S Sbjct: 87 FFDFDKSTLKPEGRQLLDQVAQQAQGIDLETIIAVGHTDSI---GTEKYNQGLSERRAAS 143 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+ GV +RI G + ++ + NRR++I V + Sbjct: 144 VKSYLVSKGVDPNRIYT-EGKGELQPVASNKTREGRAQNRRVEIEVVGSR 192 >gi|162453404|ref|YP_001615771.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56'] gi|161163986|emb|CAN95291.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 263 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 95/234 (40%), Gaps = 12/234 (5%) Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 G + Q+ + Q + N + ++ + L ++ ++L K + + + + L Sbjct: 21 GHSEQEWKSQLDKYNQLQNRSQKREAELEKELADAKQRVEELEKKLADQGADISKMSSTL 80 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 K R K+L+ + + L + + + G+ + R ++IS+ Sbjct: 81 EDREKALAEYKARAKQLEAIQARFD-LLRKKLEELVKLGLEVQVRRNRMVISL---PGDV 136 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH----STEVISIRGHTDASPFR-NIARDNWRLSLD 290 +FD + +L+KI +V+ + GHTD+ P++ +DNW LSL Sbjct: 137 LFDSGKDTLSKDGQQILKKISDVIRGDKSLVDRDYQVAGHTDSQPYKSGPFQDNWGLSLM 196 Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 RA + L+ K G R +GFA +++ NRR D++V Sbjct: 197 RARAVLLFLIGKEGQLPTRHWSAAGFADTDPIASNNTPAGKQKNRRCDLIVLPD 250 >gi|94500736|ref|ZP_01307265.1| chemotaxis MotB protein [Oceanobacter sp. RED65] gi|94427058|gb|EAT12039.1| chemotaxis MotB protein [Oceanobacter sp. RED65] Length = 226 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 15/186 (8%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 S++ + L + + +K + + + N+ + V + G+ Sbjct: 44 SVSDLNQGKIESLKEGLAGVLTGEKVVTPFSDIKKELDQIINQHNMQENVSVVIDKKGVK 103 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRN-IA 281 + D ++D S+ P+ + VL ++ +V+ S + GHTD P Sbjct: 104 VEFSD---FSLYDSGSAAIRPQALPVLNEVTKVIESSVHKTHLVEVEGHTDDVPISTEKF 160 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRI 334 NW LS RA + + L+ GV ++++ SG+A R K A + NRR+ Sbjct: 161 PSNWELSAARASNVVKYLLGKGVKKEQLKA-SGYADSRPKSAPIEGQVMDAQQRAENRRV 219 Query: 335 DILVED 340 I V Sbjct: 220 VIYVRR 225 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 ++ + G W + YAD +T+L+AFF+++ ++ + +++++ Sbjct: 11 RRRRQTFDADGEG-WIVTYADAITLLLAFFVMILSVSDLNQGKIESLKEGL 60 >gi|295691294|ref|YP_003594987.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756] gi|295433197|gb|ADG12369.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756] Length = 224 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 11/147 (7%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + GV+ I++ + FD S P + VL + Sbjct: 81 NYMDRQQADFRRSLEGSGVMIRRNGDQIVLVMPSDVT---FDVDRSDIQPRFVRVLDDVA 137 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314 L + + GH D+ N LS RA + L G V DR+ ++G Sbjct: 138 RTLNAYPQTTIDVVGHADS---SGADEYNQVLSERRASAVAGYLTSQGRVLPDRVF-VAG 193 Query: 315 FAHHRLKIASDPM--NSANRRIDILVE 339 + + + NRR++I++ Sbjct: 194 MGERQPIADNSTAAGRAENRRVEIVLR 220 >gi|146282858|ref|YP_001173011.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501] gi|145571063|gb|ABP80169.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501] Length = 244 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 7/226 (3%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 ++++ + + G+ + + + Sbjct: 17 EPQREEEQEAWLITYLDMLTLLLVMLVIMLALAGKGDGEQNDPAASAMLAAGELGVALPA 76 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 P + +A ++ + + I I + + Sbjct: 77 PAAPIPSIAPVPTPAADAQPDDPQESMPTPPGMALGDDIQVIVNEGSISFRI---SSEIL 133 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295 F + + V+ ++ LA + I + GHTD P + NW LS RA S Sbjct: 134 FGSGRAELEDAGLEVIDRLVPTLAANAFRIVVEGHTDNLPIQTERFPSNWELSASRASSV 193 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + L +G+ R+S +G+A R + NRR++++++ Sbjct: 194 VRYLQLAGIEATRLSA-TGYADTRPLADNADERGRASNRRVELVMQ 238 >gi|149276320|ref|ZP_01882464.1| OmpA/MotB [Pedobacter sp. BAL39] gi|149232840|gb|EDM38215.1| OmpA/MotB [Pedobacter sp. BAL39] Length = 448 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 39/321 (12%), Positives = 90/321 (28%), Gaps = 38/321 (11%) Query: 52 WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL------SIDEH 105 + I + KK I + G M++ + E P ++ + Sbjct: 131 FTIANLSLNQKKNILSPYATIGAGYMSSGATLRTEAGAPAIANATNQGFHENWFVPVGAG 190 Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + + + +N + ++ + K + + Sbjct: 191 FKLGISNGVNIDLGYNVNFVKGKNFDGVSGAANDRFSYAHAGVEIALGKKGAPQLQNFSP 250 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL------------------SGLV 207 E + L+ + + RL+D + + Sbjct: 251 IAALREQSAAESAELRRALSTEEQNRLRDQEQYAKDMGDDDGDGVANKFDKCPGTPANTQ 310 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSSIPLPETIVVLQKIGEVL 259 D + + + + + FD + + L ++ +L Sbjct: 311 VDGAGCPLKTPRPIVTEKVIVTEADRRVVDEAIKNLEFDLGKATIRSTSFNTLNRVAALL 370 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + GHTD + N RLS +RA S L+ GV+ R+ +G+ ++ Sbjct: 371 VEKNFSLKLAGHTDNT---GSMALNLRLSKERAESVKAYLVSQGVNASRVEA-TGYGPNQ 426 Query: 320 LKIASDPMNSA--NRRIDILV 338 + NRR++ + Sbjct: 427 PIATNKTAAGRQQNRRVEFTL 447 >gi|121594804|ref|YP_986700.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42] gi|222110597|ref|YP_002552861.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY] gi|120606884|gb|ABM42624.1| OmpA/MotB domain protein [Acidovorax sp. JS42] gi|221730041|gb|ACM32861.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY] Length = 218 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ PE L + + + I GHTD+ N +LS+ RA Sbjct: 109 DAFFDFDKSVLKPEGKAKLDDLVSKVKGINLEVIIAVGHTDSI---GTDAYNQKLSVRRA 165 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L+ G+ ++R+ G + + + NRR++I V + Sbjct: 166 EAVKAYLVSKGIEKNRVYT-EGKGEKQPVADNKTKEGRAKNRRVEIEVVGTR 216 >gi|238790227|ref|ZP_04634002.1| hypothetical protein yfred0001_31620 [Yersinia frederiksenii ATCC 33641] gi|238721670|gb|EEQ13335.1| hypothetical protein yfred0001_31620 [Yersinia frederiksenii ATCC 33641] Length = 575 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 6/110 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD SI + VL + I + GHTD ++ N LSL Sbjct: 440 DSLSLFDVGQSILKSGSTKVLINALVGIKAKPGWLIVVAGHTD---ITGDSQSNQILSLK 496 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S + +G + + G+ R ++D NRR++I + Sbjct: 497 RAESVRNWMRDTGDIPESCFAVQGYGESRPLKSNDTEAGRALNRRVEISL 546 >gi|47091738|ref|ZP_00229534.1| chemotaxis protein MotB [Listeria monocytogenes str. 4b H7858] gi|47020057|gb|EAL10794.1| chemotaxis protein MotB [Listeria monocytogenes str. 4b H7858] Length = 293 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 106/341 (31%), Gaps = 69/341 (20%) Query: 4 HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63 + +E + + + K+ + +W I Y+D +T+L+A F+V++ ++ D + Sbjct: 6 EKGRKREKWRKLSVAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFE 65 Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 + F + ++ ++ P+ + N + +++E K + + Sbjct: 66 QMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAA 125 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + +N + +Q + + + K K +D I ++ S E Sbjct: 126 LLKKQNEEKIEAFKKQIDSY---IAAEHLGAKMTTKYSDEGLLITIRDDILFQSGSAELT 182 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + +F + Sbjct: 183 AGKREIAK----------------------------------------EIGELFAQGKGT 202 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS 302 + GHTD P NW LS+ RA + + +++ Sbjct: 203 ME--------------------GIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQE 242 Query: 303 G--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 V+ S G+ R +D NRR++I+V Sbjct: 243 NSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 282 >gi|281426147|ref|ZP_06257060.1| OmpA family protein [Prevotella oris F0302] gi|299141901|ref|ZP_07035036.1| OmpA family protein [Prevotella oris C735] gi|281399723|gb|EFB30554.1| OmpA family protein [Prevotella oris F0302] gi|298576752|gb|EFI48623.1| OmpA family protein [Prevotella oris C735] Length = 284 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 85/232 (36%), Gaps = 14/232 (6%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 Q + + + S +Q K ++ + + + + + Sbjct: 41 QNTKEELAASKARVASLEEQLAQQKKNVAALQNALDKSLVNANANNINISKLVDQINESN 100 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + ++ K + L +++ L+ ++ +K V + + + IS+ D ++ Sbjct: 101 QYIRHLVEVKSKSDSLNMVLTNNLTRSLSREEMKEVDIKVLKGVVYISLADNM---LYKS 157 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRA 292 S L+KI +++ + I G+TD P + R+NW LS RA Sbjct: 158 GSYEINDRAEETLRKIAKIIMDYKDYDVLIEGNTDNVPVNTKSAAMKNIRNNWDLSALRA 217 Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 S Q L GV+ R++ G + ++D NRR I++ + Sbjct: 218 SSVVQYLQDRFGVAPKRLTAG-GRGEYNPVASNDTELGKQRNRRTQIIITPK 268 >gi|238783359|ref|ZP_04627383.1| hypothetical protein yberc0001_33370 [Yersinia bercovieri ATCC 43970] gi|238715782|gb|EEQ07770.1| hypothetical protein yberc0001_33370 [Yersinia bercovieri ATCC 43970] Length = 574 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 6/110 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD S + VL + I + GHTD + N LSL Sbjct: 439 DSLSLFDVGKSELKSGSTKVLINALVGIKAKPGWLIVVAGHTD---ITGDDKSNQTLSLK 495 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA S + +G + + G+ R ++D +ANRR++I + Sbjct: 496 RAESVRNWMRDTGDIPESCFAVQGYGQSRPLQSNDTEAGRAANRRVEISL 545 >gi|120554886|ref|YP_959237.1| flagellar motor protein MotD [Marinobacter aquaeolei VT8] gi|120324735|gb|ABM19050.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8] Length = 260 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 70/184 (38%), Gaps = 6/184 (3%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI-LAMKRKKRLQDLAKKISSTLSGL 206 + + E+ PP+++ + + R + L + Sbjct: 59 APQRSLQPVTVGGQPVRAPQQQHEDVIPPPVTEAPRNPELDAEGRTEALRTMANQLAMEF 118 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 V ET+ I +++ N+ +F + P ++ V++KI VL + + Sbjct: 119 DELINQGVVSLETSSEWIELNL---PNSMLFGSGDAEPHYDSFEVIEKIASVLRNRDNAV 175 Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 + G TD P R NW LS RA + ++LM G+ +R++ + G+ ++ +D Sbjct: 176 KVEGFTDNQPIRTSRFPSNWELSTARAAAVARMLMMEGIEPERLAAV-GYGQYQPVARND 234 Query: 326 PMNS 329 Sbjct: 235 TEEG 238 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 54/121 (44%), Gaps = 1/121 (0%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 ++++ D +N W I YADF+T+L AFF+VM+ +++ ++ K + + F Sbjct: 1 MRRRRPPQDDLHNKERWLISYADFITLLFAFFVVMYSVSSVNEGKYKVLSETFTGVFNAP 60 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 + + + P Q D I +T+ + ++ + + + + + N + + Sbjct: 61 QRSLQPVTVGGQPVRAPQQQHED-VIPPPVTEAPRNPELDAEGRTEALRTMANQLAMEFD 119 Query: 137 S 137 Sbjct: 120 E 120 >gi|115375600|ref|ZP_01462857.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] gi|310823151|ref|YP_003955509.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] gi|115367376|gb|EAU66354.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] gi|309396223|gb|ADO73682.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] Length = 249 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + + E L + + + S+ I+++GH D N +LS RA + Sbjct: 150 FGFNEASLSSEAQSRLSALADCIKASSGRITLQGHADER---GTEEYNLQLSNSRASAVK 206 Query: 297 QVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336 + L GV +R++ + G+ R + + + NRR++ Sbjct: 207 RYLTTLGVPANRLATV-GYGETRPLNSASDEEAWAQNRRVEF 247 >gi|114569157|ref|YP_755837.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10] gi|114339619|gb|ABI64899.1| OmpA/MotB domain protein [Maricaulis maris MCS10] Length = 227 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 10/146 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + + GV + + + F +S+ + +L + Sbjct: 84 NYMDRQETAMREALSDTGVGVRREGNDLRLIM---PGDVTFATNSADIQGQFYGILSDVS 140 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + + GH D+ A N +LS RA S L+ GV DR I+G Sbjct: 141 TVLNRYPATYVDVVGHADSV---GAADYNQQLSERRALSVGNYLIAQGVLRDRFY-IAGM 196 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 +++ NRR++IL+ Sbjct: 197 GERSPIASNETAAGRQQNRRVEILIR 222 >gi|254516643|ref|ZP_05128702.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3] gi|219675066|gb|EED31433.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3] Length = 255 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 51/128 (39%), Gaps = 7/128 (5%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD 273 V + + ++ + F S+ ++ L V+ + + + G+TD Sbjct: 132 VKVDMKGCPVKDEVVLTIDRLGFAFDSAALDAKSRSALDAAVAVIKSHSSVKMDVVGYTD 191 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331 + N +LS RA +A L+ GV+ ++ + +G ++D N Sbjct: 192 S---SGPEEYNQKLSERRAQAAVDYLVSQGVAAGQL-RATGRGEANPVASNDSRDGRERN 247 Query: 332 RRIDILVE 339 RR++++V Sbjct: 248 RRVELVVR 255 >gi|124010248|ref|ZP_01694902.1| chemotaxis protein MotB [Microscilla marina ATCC 23134] gi|123983684|gb|EAY24121.1| chemotaxis protein MotB [Microscilla marina ATCC 23134] Length = 286 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 74/194 (38%), Gaps = 9/194 (4%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 L K + + + + L R +L K + + + + Sbjct: 86 TTTQLRKQLNERQKELQRKEQLLANREAVVQKLKAAIDRKDNLLKNLLGKVRNALKNFNP 145 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 + + I +S+ ++ +F + + L K+ EVL + + I I GH Sbjct: 146 DELTVTSKNGKIYVSLAEKL---LFKSGRTDVDRKGKKALGKLAEVLNKNQDIDIQIEGH 202 Query: 272 TDASPFRN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA--SDPM 327 TD+ P RDNW LS+ RA S ++L+K V ++ G + + Sbjct: 203 TDSIPITTARFRDNWDLSVLRATSIVRILVKDYEVDPKTLTPA-GRGETTPVASNKNKEG 261 Query: 328 NSANRRIDILVEDR 341 + NRRI+I++ + Sbjct: 262 RAKNRRIEIVLSPK 275 >gi|89092082|ref|ZP_01165037.1| hypothetical protein MED92_07941 [Oceanospirillum sp. MED92] gi|89083817|gb|EAR63034.1| hypothetical protein MED92_07941 [Oceanospirillum sp. MED92] Length = 218 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 55/148 (37%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L + GV E I + + F +S P VL + + Sbjct: 77 YMDQQEALLRQELEGTGVRVERIGDSIRLIM---PGNITFALNSDQIAPSFYSVLDSVAK 133 Query: 258 VL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL +++ G TD++ N +LS RA L+ SG+S RI+ G+ Sbjct: 134 VLVKFDQTELNVDGFTDST---GSFEYNQQLSERRAARVGDYLVSSGISRLRINA-KGYG 189 Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342 + + NRR++I + + Sbjct: 190 ERYPIADNKTAAGRAQNRRVEINISGTR 217 >gi|26990890|ref|NP_746315.1| OmpA/MotB domain protein [Pseudomonas putida KT2440] gi|148546893|ref|YP_001266995.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1] gi|24985904|gb|AAN69779.1|AE016614_5 OmpA family protein [Pseudomonas putida KT2440] gi|148510951|gb|ABQ77811.1| OmpA/MotB domain protein [Pseudomonas putida F1] gi|313497955|gb|ADR59321.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1] Length = 270 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 88/239 (36%), Gaps = 10/239 (4%) Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 + +V + + + I + ++E + + S+ S + Sbjct: 33 EATVAFQGVKDDSDVLRSAPRDVIRAGESLARAERLSSYIGTGSDVRHYAYLSQRYSEIA 92 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + L + K+ +++ +L K++S L L+ Sbjct: 93 REHAKLALNQERQAKLDLERQRLQLALREAKLASVQQQGKWVESQIAALASEQADRGLVM 152 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWR 286 +FD S+ + K+ + L + V+ I G+TD++ +N + Sbjct: 153 ---TLGDVLFDTGSADLKNSASRTVLKLVQFLQLNPRRVVRIEGYTDST---GAGEENLK 206 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 LS DRA S +L+ G+ E R+ ++ G+ A+ + NRR++I+ D +G Sbjct: 207 LSRDRAQSVADMLVDLGIDEKRL-QVEGYGDQYPIEANASERGRAQNRRVEIVFSDDKG 264 >gi|222086409|ref|YP_002544943.1| outer membrane lipoprotein [Agrobacterium radiobacter K84] gi|221723857|gb|ACM27013.1| outer membrane lipoprotein [Agrobacterium radiobacter K84] Length = 222 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + S L A GV I++++ FD PE L + Sbjct: 78 NYMDQQESELRAQLQGTGVSVTRVGDRIILNMPSAIT---FDIDRDEIKPEFFATLNSVA 134 Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + +I + GHTD++ + N LS RA S L G+ + R+S + GF Sbjct: 135 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSERRAGSVASYLGSQGIDQRRVSAV-GF 190 Query: 316 AHHRLKIA--SDPMNSANRRIDILV 338 + + ++ + NRR++I + Sbjct: 191 GPTQPVASNANESGRAQNRRVEIQI 215 >gi|330812625|ref|YP_004357087.1| hypothetical protein PSEBR_a5553 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380733|gb|AEA72083.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 436 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 4/117 (3%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNW 285 S++ R +F S+ + ++ +I + + + + GH+D P NW Sbjct: 317 SVVTIRGDELFASGSASIKDDFQPLMLRIADAVRKVKGQVLVTGHSDNRPIATLRFPSNW 376 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 LS RA S Q+L +R S G + ++ + NRR++I V Sbjct: 377 ALSEARAQSVLQILSAKTGQPERFSA-EGRSDTEPLASNATTEGRARNRRVEITVLA 432 >gi|313200972|ref|YP_004039630.1| ompa/motb domain-containing protein [Methylovorus sp. MP688] gi|312440288|gb|ADQ84394.1| OmpA/MotB domain protein [Methylovorus sp. MP688] Length = 444 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 9/138 (6%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V E ++ + MF ++ P T +++K+G +A Sbjct: 299 LATEIAQGKVRVEEDSAHAIVVF---KGDGMFSGGLAMLSPATREIVEKVGRAVADVQGR 355 Query: 266 ISIRGHTDASPFRNI---ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GH+D ++N LS RA + QV+ + GV RI +++G + Sbjct: 356 VRVVGHSDNQKLSGKNPEFKNNQILSEKRAQAVVQVMTEMGVDNSRI-EVAGMGDTQPIT 414 Query: 323 ASDPM--NSANRRIDILV 338 ++ + NRR++I V Sbjct: 415 SNSTASGRAKNRRVEIEV 432 >gi|288801555|ref|ZP_06406997.1| OmpA family protein [Prevotella melaninogenica D18] gi|302345028|ref|YP_003813381.1| OmpA family protein [Prevotella melaninogenica ATCC 25845] gi|288335597|gb|EFC74030.1| OmpA family protein [Prevotella melaninogenica D18] gi|302149794|gb|ADK96056.1| OmpA family protein [Prevotella melaninogenica ATCC 25845] Length = 286 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 77/215 (35%), Gaps = 14/215 (6%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 Q + S + ++ + + + ++ ++ K + L Sbjct: 58 EDQLAQARESAAALQGSLDNSLRNANSNNINISKLVDQINESNQYIRHLVEVKSKSDSLN 117 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 +++ L+ ++ +K V + + + IS+ D ++ S L KI Sbjct: 118 MVLTNNLTRSLSREELKEVDVQVLKGVVYISLADNM---LYKSGSYEVNDRAEQTLSKIA 174 Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRAYSAYQVLMKS-GVSEDR 308 +++ + I G+TD P R+NW LS RA S Q L GV+ R Sbjct: 175 KIITDYKDYDVLIEGNTDNVPINTTTDKMKNIRNNWDLSCLRAASVAQYLQDRFGVNPKR 234 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 ++ G + +D NRR I++ + Sbjct: 235 LTAG-GRGEYNPLATNDTELGKQRNRRTQIIITPK 268 >gi|197116453|ref|YP_002136880.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem] gi|197085813|gb|ACH37084.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem] Length = 333 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + S P+ L+ + + L +I GHTD+ N +LS RA S Sbjct: 229 FDTNKSDIKPQYHDELKALADFLKEFPNATGTIEGHTDSV---GDKAANMKLSQRRADSV 285 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRID 335 + L+ G++ +R+ + G+ + + NRRI+ Sbjct: 286 RKYLVDKFGIAPERVKAV-GYGPTKPAADNKTAAGKQKNRRIE 327 >gi|38327415|gb|AAR17735.1| motility protein B [Bdellovibrio bacteriovorus] Length = 248 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 60/152 (39%), Gaps = 7/152 (4%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 ++ + +L + K + + + + I + F + S+ PE + L Sbjct: 94 EVEDYVERSLDKSMDSAQKKLAIQDVYHDAVGVRIA-LAASTFFQEGSAKLKPEALKXLD 152 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISK 311 +VL + I I GHTD P NW L+ RA + + L+K + R Sbjct: 153 -KVDVLKTHKKRIIIEGHTDDLPIAGTLFPSNWELAGGRASAVVRYLVKVHQMDPKRFVS 211 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 +S + + + +D + NRRI+I + Sbjct: 212 LS-YGDQKPVVPNDSDEHRAMNRRIEIFIVTD 242 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 2/144 (1%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + KK ++ N+ W + YADF+T+L AFF+VM+ + ++++ +K E Sbjct: 1 MAKKHRKHEEHENH-ERWLVSYADFITLLFAFFVVMYATSTSNEEKQKEFEDSVKLSLHL 59 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + + + V+ + + K + + Sbjct: 60 VGRGGSDADSNSIGSIIGELEMPVGNFPKKGGPGEVEDYV-ERSLDKSMDSAQKKLAIQD 118 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCK 159 + + +L + + K Sbjct: 119 VYHDAVGVRIALAASTFFQEGSAK 142 >gi|149193957|ref|ZP_01871055.1| OmpA/MotB [Caminibacter mediatlanticus TB-2] gi|149135910|gb|EDM24388.1| OmpA/MotB [Caminibacter mediatlanticus TB-2] Length = 256 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 9/218 (4%) Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ L S + + + + + +K + Sbjct: 20 TFGDLMSLLLCFFVLLLSMSTMDAKKVKEAIGSLQGALSVLEGGTQTEVSRERIQKATPI 79 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL- 245 + + ++ ++ T + G I F S+ Sbjct: 80 VKNEETAQTVNRLQQAITEFKEMTQAGKGNAITLQEGEEGFFIRLPADITFAPGSAEITN 139 Query: 246 PETIVVLQKIGEVLAHS---TEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLM 300 ++++ L++I ++ I IRG+TD P + RDNW LS RA S ++L+ Sbjct: 140 QDSLLFLKRIAIIIKEYLPKNIDIQIRGYTDNLPPPKNSPYRDNWDLSAARALSVLKILI 199 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 K GV ++S + + + ++ NRR++I Sbjct: 200 KDGVDPKQLSAAA-YGEYHPIASNLTPEGRDKNRRVEI 236 Score = 37.6 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 34/106 (32%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P + W + D M++L+ FF+++ ++ D K L Sbjct: 3 KKKCKCECPECMPEWLATFGDLMSLLLCFFVLLLSMSTMDAKKVKEAIGSLQGALSVLEG 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 ++ + + + K + + + Q + Sbjct: 63 GTQTEVSRERIQKATPIVKNEETAQTVNRLQQAITEFKEMTQAGKG 108 >gi|313206839|ref|YP_004046016.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868] gi|312446155|gb|ADQ82510.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868] gi|315023913|gb|EFT36915.1| putative flagellar motor protein MotB [Riemerella anatipestifer RA-YM] Length = 278 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + R L +S+ L + + + V + + ++IS+ D+ ++ Sbjct: 103 KQLISTNARNDSLNLALSNKLKRSLDNVADQDVQVKVLKGVVMISLSDKM---LYRSGDY 159 Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299 LP VL K+ +V+ + I G+TD P + + +DNW LS RA S +VL Sbjct: 160 NILPAAQEVLGKVAKVINDYDKYSVLIEGNTDNVPLNSASLPKDNWDLSALRATSVAKVL 219 Query: 300 MKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 GV RI+ G + + K + + NRR +I++ + Sbjct: 220 QNQFGVDPSRITAG-GRSEYNPKATNMSVSGRAENRRTEIIIMPK 263 >gi|312890939|ref|ZP_07750468.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] gi|311296722|gb|EFQ73862.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] Length = 252 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286 I+ + +FD + P + ++ L + E I GHTD + A N Sbjct: 127 IVKFDSGILFDIDKTALKPVAKTNIDQLSASLKKNPETNILIVGHTDNT---GTAAHNMD 183 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 LS+ RA + + +GV R++ G + ++ NRR++I++ Sbjct: 184 LSVRRAEAVKAYAIAAGVDASRLTT-QGKGDTEPIADNTTVDGRTQNRRVEIVI 236 >gi|254561554|ref|YP_003068649.1| flagellar motor protein MotB [Methylobacterium extorquens DM4] gi|254268832|emb|CAX24793.1| flagellar motor protein MotB [Methylobacterium extorquens DM4] Length = 337 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 100/297 (33%), Gaps = 22/297 (7%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + Q L ++ I D + ++ +N++ ++ + Sbjct: 43 LSQELTGRDAVLTRLNRQIADLTDLLALERSSRRAQEEAASGLRNTLTATEAERDRLRAL 102 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 S ++ + + + +++ ++ L+ + Sbjct: 103 TDASEAAQGKSADVDAQLAAERGATQRAQNQVEL-LNEQIRALRRQLAALEDALAASESR 161 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTP 235 + + R+ +L +++ L+ V + F ++ S D R + Sbjct: 162 DRESQARIAELGSRLNVALAQRVQELARYRSDFFGRLRQVIGSRTDVRIVGDRFVLQSEV 221 Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWR 286 +F S+ PE L +I + A V+ + GHTDA P ++ NW Sbjct: 222 LFAAGSAALKPEAGPELDRIAGAILDIAREIPADIPWVLRVDGHTDARPIQSAQFPSNWA 281 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 LS RA + Q L G+ R+ + F + + + NRRI++ + +R Sbjct: 282 LSASRAIAVVQYLRSKGLPPQRLLAGA-FGEFQPLDSGTSEEAYSRNRRIEMKLTER 337 >gi|86139806|ref|ZP_01058372.1| OmpA domain protein [Roseobacter sp. MED193] gi|85823435|gb|EAQ43644.1| OmpA domain protein [Roseobacter sp. MED193] Length = 218 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 71/205 (34%), Gaps = 10/205 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + ++L + EK ++ + + + + + A + Sbjct: 17 GLTACTDTDALRQPGEKERNGLIAGAIVGAGLAGLSNSSNKGAAVVAGAAAGALLGGVIG 76 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 ++ + L G+ T +++S+ + F S+ P L+++ Sbjct: 77 SQLDKQEAELRESLSNNGITIVNTGDRLIVSLPNDLT---FASDSAAISPAVESDLRQVA 133 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + + + GHTD+ A N LS RA + + GV +R+ G Sbjct: 134 QSIVRYPNSSVQVIGHTDSD---GDASYNQTLSEQRANTVADQVQAGGVPYNRLQTF-GR 189 Query: 316 AHHRLKIASDPMN--SANRRIDILV 338 + ++ + NRR++I++ Sbjct: 190 GESQPVASNLTAEGKAQNRRVEIVI 214 >gi|114046351|ref|YP_736901.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7] gi|113887793|gb|ABI41844.1| OmpA/MotB domain protein [Shewanella sp. MR-7] Length = 514 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 60/155 (38%), Gaps = 9/155 (5%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + Q + IS+ + ++ K ++ IS D+ MF S+ Sbjct: 101 SASTNADNQQNSLLISANNQAMSKEDQEKYSDYQVVGMAATISSTDEM---MFGSGSAEA 157 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + LQK+ + S + I I GHTDA N LS RA + ++G+ Sbjct: 158 TAQAKQKLQKLAAIYKDSKQNILITGHTDA---SGSESLNQTLSEARARYVATLFNQAGI 214 Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 +R+ G + ++ + NRR++I+ Sbjct: 215 PTERLF-FQGAGESQPVAANTNETGKAKNRRVEIV 248 >gi|300023765|ref|YP_003756376.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525586|gb|ADJ24055.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 716 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 86/250 (34%), Gaps = 11/250 (4%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 K DL+ N + G R+ + + + E + Sbjct: 469 KTDLAWKATRAPNGMITLEGDVPDDPARVRVIETAQRIYPGESITDQMKIVGAPPEPWQS 528 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + + + + + + A + ++ ++ +S+ L V+ Sbjct: 529 ATRVALEQLARLRRGDVEMSGKEVMIQGAAESERVADEIRSVLSTDLPPGFKVRDAITVM 588 Query: 217 FETTR----TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGH 271 + L+ + T F+++ + ++ L+ + EV I I GH Sbjct: 589 TGEEKAADSCQTLMRQTSAKGTINFERAKADLTSDSTQTLRDLVEVANECPSFSIEIEGH 648 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNS 329 TDA N RLS RA + L ++GVS R+S I G+ R + + + Sbjct: 649 TDAE---GTDERNQRLSDRRARAVADFLTQNGVSARRLSTI-GYGATRPVADNATETGRA 704 Query: 330 ANRRIDILVE 339 NRRI+ V+ Sbjct: 705 KNRRIEFNVK 714 >gi|162454304|ref|YP_001616671.1| OmpA family outer membrane protein [Sorangium cellulosum 'So ce 56'] gi|161164886|emb|CAN96191.1| putative OmpA family outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 488 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 92/262 (35%), Gaps = 21/262 (8%) Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 + +E+ P E KI+ S + IT + S+ + + Sbjct: 244 LNEEETPLEALGYVKINPSEEWEITAGPGIGALAGYGVPIFRVFAGVKYTPTSHDRDHDG 303 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + + + +D D + ++ + + K+ + + Sbjct: 304 VDDERDQCPDVPEDRDADYDSDGCPEEDADDDHDGVPNADDECPDEKETINGVED----- 358 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 D V +E I +I F S+ ++ L ++ V+ + Sbjct: 359 -DDGCPDKGEPRVAYEQGEFVIRDTIR-------FRTGSAELEQDSYRTLDQVALVMKAN 410 Query: 263 TE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 E + + GHTD + N LS RA + + L++ GVS R++ GF R Sbjct: 411 PEIERLRVEGHTDET---GTPELNQELSEQRAETVRKYLIRKGVSPGRLTA-EGFGSDRP 466 Query: 321 KIA-SDPMN-SANRRIDILVED 340 +DP + + NRR++ ++++ Sbjct: 467 VAEGTDPASLAKNRRVEFVIDE 488 >gi|77460334|ref|YP_349841.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1] gi|77384337|gb|ABA75850.1| putative outer membrane protein [Pseudomonas fluorescens Pf0-1] Length = 270 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 77/188 (40%), Gaps = 11/188 (5%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 E + + L +R + +K +S G + + + Sbjct: 85 SQRYSEIAREHTNQVLNEERVAKLELERQRLQLALRESKLLSVQQQGKWLEEQIVALATT 144 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277 T G+++++ D +FD + V+ KI + L + ++ I G+TD++ Sbjct: 145 QTDRGLVMTLGD----VLFDTGEAELKNSANRVVLKIVQFLQLNPKRIVRIEGYTDST-- 198 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 ++N +LS DRA S VL G+ E RI ++ G+ A+ + NRR++ Sbjct: 199 -GGKQENLKLSRDRAQSVADVLTDLGIDEKRI-QVEGYGDEYPVDANASERGRAQNRRVE 256 Query: 336 ILVEDRQG 343 I+ D +G Sbjct: 257 IVFSDEKG 264 >gi|225012825|ref|ZP_03703259.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A] gi|225003099|gb|EEG41075.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A] Length = 283 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 9/174 (5%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + + + + ++L G++ + + + + +SI D+ Sbjct: 98 ESMKEKDIRIQRMQDAVTKKDSVTLALVTSLKGVLGNMSDDDIEINVEKGVVYVSISDKL 157 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA-RDNWRLSLD 290 +F S VL K+ V+ + E + GHTD P ++ DNW LS+ Sbjct: 158 ---LFRSGSYTVTSRAKEVLGKVATVVNNKPELEFMVEGHTDNVPIKSDGIVDNWDLSVK 214 Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 RA + ++L K GV+ R++ G + + +D + NRR I+V + Sbjct: 215 RATAVVRILEKDFGVAPARMTAA-GRSFYIPVADNDTAANRAKNRRTRIVVLPK 267 >gi|254428835|ref|ZP_05042542.1| Rickettsia 17 kDa surface antigen family [Alcanivorax sp. DG881] gi|196195004|gb|EDX89963.1| Rickettsia 17 kDa surface antigen family [Alcanivorax sp. DG881] Length = 221 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 70/201 (34%), Gaps = 12/201 (5%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD--LAKKISS 201 + + + K + ++ KE+ LA + + + Sbjct: 24 PYTGEKQTSKATSGAAIGAVAGALIGIATSDSAKERKERALAGAGIGAVTGGGVGYYMDV 83 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + L GV I++++ F S+ VL + EVL Sbjct: 84 QEAKLRQKLEGAGVSVTRDGENIILNM---PGNLTFATDSTNVKSSFDPVLDAVSEVLNE 140 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 +I + GHTD++ R N LS RA + L GV + R+ + GF + Sbjct: 141 YKSTMIQVAGHTDST---GGDRYNLLLSQQRAQAVSNKLSGYGVEQVRLDTV-GFGETQP 196 Query: 321 KIASDPMNSA--NRRIDILVE 339 +++ + NRR+++ + Sbjct: 197 IASNNTASGREQNRRVELTLL 217 >gi|74318813|ref|YP_316553.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259] gi|74058308|gb|AAZ98748.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259] Length = 266 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + PE L + E L + + GHTD+ + N LS RA + Sbjct: 163 FAYDKATLRPEAREKLDQAVETLKGWGEGTVEVGGHTDS---KGSEAYNMELSRRRAEAV 219 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 + L+ G+ +++ + + +D NRR+++ Sbjct: 220 REYLIGKGIPAEQLVT-KAYGESQPIADNGNDIGRFKNRRVEL 261 >gi|298369467|ref|ZP_06980784.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282024|gb|EFI23512.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314] Length = 224 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L V E I + + + F +S+ L + Sbjct: 76 YMDYQAKKLRESLANTDVKVEQQGNQIKLVMPENVT---FATNSATLSANARDALTAASK 132 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +I GHTD + N LS +RA S L GV+ R++ G Sbjct: 133 TLVQYPDTTLTINGHTDNT---GSDAINDPLSRNRAQSVASFLQSQGVAGSRLTTA-GHG 188 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 + ++ + NRR++IL+ Q Sbjct: 189 SRQPVASNATPEGRAQNRRVEILINPDQ 216 >gi|325335721|gb|ADZ11995.1| Flagellar motor protein [Riemerella anatipestifer RA-GD] Length = 281 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 10/165 (6%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + R L +S+ L + + + V + + ++IS+ D+ ++ Sbjct: 106 KQLISTNARNDSLNLALSNKLKRSLDNVADQDVQVKVLKGVVMISLSDKM---LYRSGDY 162 Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299 LP VL K+ +V+ + I G+TD P + + +DNW LS RA S +VL Sbjct: 163 NILPAAQEVLGKVAKVINDYDKYSVLIEGNTDNVPLNSASLPKDNWDLSALRATSVAKVL 222 Query: 300 MKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 GV RI+ G + + K + + NRR +I++ + Sbjct: 223 QNQFGVDPSRITAG-GRSEYNPKATNMSVSGRAENRRTEIIIMPK 266 >gi|307547058|ref|YP_003899537.1| OmpA/MotB domain protein [Halomonas elongata DSM 2581] gi|307219082|emb|CBV44352.1| OmpA/MotB domain protein [Halomonas elongata DSM 2581] Length = 223 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 76/203 (37%), Gaps = 10/203 (4%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 ++ R+ + + + + I A + + Sbjct: 23 TDPYSGQTQRNKTGTGAAIGAAIGAAAGALSGDGSTSRRDRALIGAAAGAAAGGGIGAYM 82 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L + G+ E I++++ + F SS P L + VL Sbjct: 83 DRQEQQLRSSMQGTGIGVERQGNDIVLNM---PSEVTFGFDSSDLTPAATSALNDVSNVL 139 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 T+ I+I GHTD++ A N RLS RA + Q L +SGVS R++ + G+ + Sbjct: 140 TQYTDTRINIAGHTDST---GDAGYNQRLSERRAQAVGQYLSQSGVSAGRLN-MQGYGEN 195 Query: 319 RLKIASDPM--NSANRRIDILVE 339 + ++D + NRR+++ + Sbjct: 196 QPVASNDTEAGRAQNRRVEMTLT 218 >gi|289209442|ref|YP_003461508.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] gi|288945073|gb|ADC72772.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] Length = 221 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L GV I++++ FD + PE VL + Sbjct: 78 NYMDRQEAELREQLRGTGVSVTRDGDNIILNM---PGHITFDIDRTDIKPEFEEVLNSVA 134 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VLA + I + GHTD N LS RA S + L++ GV R+ + GF Sbjct: 135 LVLAEYDQTGIEVAGHTD---ITGRVEYNMDLSERRAQSVGRALIRRGVQSVRVDTV-GF 190 Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338 H+ ++ NRR+++ + Sbjct: 191 GPHQPIATNETAEGRALNRRVELTL 215 >gi|85704503|ref|ZP_01035605.1| hypothetical protein ROS217_05474 [Roseovarius sp. 217] gi|85670911|gb|EAQ25770.1| hypothetical protein ROS217_05474 [Roseovarius sp. 217] Length = 461 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 59/168 (35%), Gaps = 7/168 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 +++ A +I L A+ V ++ I + + + M Sbjct: 296 QVAELLRRAPPPPPPPPPNDGQIERVKGFLEAEIREGIVEVFQDQSTITVRLT---GSGM 352 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSA 295 F S P L ++ L + I I GH+D P ++ N LSL RA S Sbjct: 353 FGSGSDQLQPAFDTPLSRVANALNDAEGPIIIVGHSDNVPIKSSRFPTNMHLSLARAESV 412 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + L + R+ G A + + NRRI++++ + Sbjct: 413 MRTLSTQIDDKARLKA-EGHADKDPIADNGTSEGRAKNRRIEVVLIRK 459 >gi|218660571|ref|ZP_03516501.1| outer membrane lipoprotein [Rhizobium etli IE4771] Length = 196 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A G+ I++++ FD P L + Sbjct: 53 NYMDQQEAELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 109 Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + +I + GHTD++ + N LS RA S L G+ + R+S + GF Sbjct: 110 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 165 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 + ++ + NRR++I + Sbjct: 166 GPSQPVASNASEAGRAQNRRVEIQI 190 >gi|187923017|ref|YP_001894659.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] gi|187714211|gb|ACD15435.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 217 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 ++ FD +S P VL ++ + + + E V + GHTD++ N LS++ Sbjct: 103 PSSVTFDTNSYAVKPSFAPVLDQLAQTMQQNPELVAQVVGHTDST---GQPAYNQTLSVN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 RA S L + GV+ R+S G + ++ +ANRR++I + Sbjct: 160 RAESVTGYLGQRGVAPQRLSA-QGLGQTQPIADNNTEAGRAANRRVEIYLRA 210 >gi|148546401|ref|YP_001266503.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1] gi|148510459|gb|ABQ77319.1| OmpA/MotB domain protein [Pseudomonas putida F1] Length = 239 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 7/116 (6%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDN 284 + +D MF S+ LQ + L + + + GHTD N Sbjct: 127 VITLDDNGAVMFAFDSAELTLAAQQRLQGLVAKLNSPTVTKVRVIGHTDGV---GSDSYN 183 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 LS RA S + L+ G+ +++ G ++ + NRR+++ + Sbjct: 184 QALSERRASSVAEYLIGQGLEMGKVTS-QGRGESEPVTDNETEEGRARNRRVELHL 238 >gi|325121508|gb|ADY81031.1| hypothetical protein BDGL_000445 [Acinetobacter calcoaceticus PHEA-2] Length = 475 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 76/271 (28%), Gaps = 17/271 (6%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P L T KG + L +S T+Q + + Sbjct: 217 PASLTLSTDDKGAVSQCQAGIGDQGFLATLQTQVKQVFSSTQDCNVDTSQTYAAGFTDKD 276 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 SL +K ++ + +P ++ Sbjct: 277 ALAGVLGALKGVPNASLEWIGDKITLKAADAAALAALTAKVKALVPHTEVVSTAPETAEQ 336 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + + L + +N+ L + I+ F SS + Sbjct: 337 SVSNSLTASQTALGSIDPNNVDVNALVKALNLQIIN----------FASGSSDIPADNKA 386 Query: 251 VLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L + +L V ++ GHTD++ A N LS RA + L GV ++ Sbjct: 387 ILDQAATLLNKVNGVKLNVGGHTDST---GNAAANKALSQRRAQAVVDYLTSKGVEGSKL 443 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338 G + + NRRI+ V Sbjct: 444 VA-QGHGSDQPVAENTTEEGRFKNRRIEFSV 473 >gi|319957287|ref|YP_004168550.1| ompa/motb domain protein [Nitratifractor salsuginis DSM 16511] gi|319419691|gb|ADV46801.1| OmpA/MotB domain protein [Nitratifractor salsuginis DSM 16511] Length = 351 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 11/143 (7%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + + V + + + + +FD + I PE L + + + Sbjct: 217 KAEAKPTPEQVGIIVRKTSEGSMLTV-----PEKVLFDFNKFILKPEAKKALDVVADYIR 271 Query: 261 HST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 I + G+TD N RLSL RA S LM G + ++ KI G Sbjct: 272 SHPARQIVVTGYTDNI---GTDAYNLRLSLQRAQSVADYLMDCGKVDPKLFKIVGKGKAN 328 Query: 320 LKIASDPM--NSANRRIDILVED 340 + + NRR++I + Sbjct: 329 PIADNATEEGRAKNRRVEIRLIR 351 >gi|319779310|ref|YP_004130223.1| Outer membrane protein A precursor [Taylorella equigenitalis MCE9] gi|317109334|gb|ADU92080.1| Outer membrane protein A precursor [Taylorella equigenitalis MCE9] Length = 188 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE VL +I E + T I GHTD+ N +LS RA + Sbjct: 82 FFDFDKSSLKPEGRTVLDQIAEQVKLLTLESLITVGHTDSI---GTNAYNQKLSERRAAT 138 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 L+ GV ++I SG + + + NRR+DI Sbjct: 139 VKNYLIDKGVPAEQIIA-SGRGETQPIADNRTREGRAQNRRVDI 181 >gi|325106498|ref|YP_004276152.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] gi|324975346|gb|ADY54330.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] Length = 435 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 9/134 (6%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 + + + ++ I+ I FD + + L ++ ++L + Sbjct: 308 PREIVREKIVVTEADRKIVDEAIKNLE---FDLGKATIRSTSYATLNRVAQLLVEKNFSL 364 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + GHTD + N RLS +RA S L+ G + RI +G+ + ++ Sbjct: 365 KLAGHTDNT---GSMELNMRLSKERAESVKAYLVSQGANASRIEA-TGYGPTQPIASNKT 420 Query: 327 MNSA--NRRIDILV 338 NRR++ + Sbjct: 421 AEGRQKNRRVEFTL 434 >gi|296272285|ref|YP_003654916.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296096460|gb|ADG92410.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299] Length = 343 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 63/173 (36%), Gaps = 7/173 (4%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 ++ P + +E + + + + K + S G++ + I Sbjct: 173 GKKAAPAPEVKEEPKPVVMEEPKKVEEPKVLDSDNDGVIDSLDQCPDTMRGANVDKVGCI 232 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287 F SSI + +++ E L + +I GHTD + + N L Sbjct: 233 KMLDLEVHFPIDSSIIDEKYKHRIKEFAEFLNKHPKLKATIEGHTD---YTGTKKYNLWL 289 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 S RA SA++ L K V R+ I G+ R + + NRRI+ V Sbjct: 290 SKRRANSAFEALKKYDVDPARLKTI-GYGETRPIATNKTKEGRAKNRRIEATV 341 >gi|299771293|ref|YP_003733319.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter sp. DR1] gi|298701381|gb|ADI91946.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter sp. DR1] Length = 217 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 52/148 (35%), Gaps = 9/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV G + I+ + FD + S P L K+ + Sbjct: 76 YLDQKEKKLRQQMAGTGVDVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYSTLNKVAQ 133 Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 LA + I + G+TD + N LS RA S L GVS RI GF Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVRSYLASQGVSASRIDA-QGFG 189 Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342 + NRR++I + +Q Sbjct: 190 SSNPIADNSTATGREQNRRVEISIYAKQ 217 >gi|269961586|ref|ZP_06175948.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833627|gb|EEZ87724.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 318 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T F +S+ PE+ L + L + + + G+TD A N ++S R Sbjct: 205 GTGSFALNSTTLKPESAAKLDDLVAFLNEYPQANVDVIGYTDT---SGPAAYNQKVSEKR 261 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A S L++ G+ DRI G + +++ NRR++++V Sbjct: 262 AESVANALVEKGIDADRIHA-RGEGENNPIASNETREGREQNRRVEVVV 309 >gi|221213356|ref|ZP_03586331.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] gi|221166808|gb|EED99279.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] Length = 316 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 78/246 (31%), Gaps = 14/246 (5%) Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT----RDSEKGKDL 157 + + G + L + + N + D + Sbjct: 74 TAGTLAPPPANATPGQVVVGGKVPDEATKAAVLQKLRDTYGAANVVDQIEVGDVATPPNW 133 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL--VADNIVKGV 215 + ++ + MK + + ++I+S ++ I G+ Sbjct: 134 SANVQKLLGAQLKQISKGQLKINGTQIEMKGEVHNEAQRQQIASDMANTLNPTYTIRNGL 193 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDA 274 + G+L + R F+ S+ P+ +L ++ LA I GHTD Sbjct: 194 RVSASEQGLLDQTLANRTIE-FETGSATLTPQGKQILDQMAAALAKLQNRTVDIIGHTDN 252 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 N LS RA + L+ G++ +++ +G + +D + NR Sbjct: 253 ---SGNRTSNIALSQARADAVKGYLITKGIAPQQMTT-TGVGPDQPIAPNDTADGRARNR 308 Query: 333 RIDILV 338 RI+ V Sbjct: 309 RIEFRV 314 >gi|163851783|ref|YP_001639826.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens PA1] gi|218530589|ref|YP_002421405.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4] gi|240138946|ref|YP_002963421.1| flagellar motor protein MotB [Methylobacterium extorquens AM1] gi|163663388|gb|ABY30755.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1] gi|218522892|gb|ACK83477.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4] gi|240008918|gb|ACS40144.1| flagellar motor protein MotB [Methylobacterium extorquens AM1] Length = 337 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 100/297 (33%), Gaps = 22/297 (7%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + Q L ++ I D + ++ +N++ ++ + Sbjct: 43 LSQELTGRDAVLTRLNRQIADLTDLLALERSSRRAQEEAASGLRNTLTATEAERDRLRAL 102 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 S ++ + + + +++ ++ L+ + Sbjct: 103 TDASEAAQGKSADVDAQLAAERGATQRAQNQVEL-LNEQIRALRRQLAALEDALAASESR 161 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---------NTP 235 + + R+ +L +++ L+ V + F ++ S D R + Sbjct: 162 DRESQARIAELGSRLNVALAQRVQELARYRSDFFGRLRQVIGSRTDVRIVGDRFVLQSEV 221 Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIAR-DNWR 286 +F S+ PE L +I + A V+ + GHTDA P ++ NW Sbjct: 222 LFAAGSAALKPEAGPELDRIAGAILDIAREIPADIPWVLRVDGHTDARPIQSAQFPSNWA 281 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 LS RA + Q L G+ R+ + F + + + NRRI++ + +R Sbjct: 282 LSASRAIAVVQYLRSKGLPPQRLLAGA-FGEFQPLDSGTSEEAYSRNRRIEMKLTER 337 >gi|281421937|ref|ZP_06252936.1| OmpA family protein [Prevotella copri DSM 18205] gi|281403991|gb|EFB34671.1| OmpA family protein [Prevotella copri DSM 18205] Length = 284 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 87/243 (35%), Gaps = 14/243 (5%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 + + ++ S Q + + + +Q K+ + + Sbjct: 31 QNENKELSSNYQATKEKLAATEASLAAAQEQLATAKSDYAKLQNSLDKSLNNASQNNVSI 90 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 ++ + ++ ++ K + L +++ L+ ++ +K V + + + IS+ Sbjct: 91 EKLVDQINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSKEEMKEVDVQVLKGVVYISL 150 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------ 281 D ++ S L KI +++ + + G+TD P + Sbjct: 151 ADNM---LYQSGSYEVNSRAQETLSKIAKIITDYKDYDVLVEGNTDNVPVSTTSAKMKNI 207 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 R+NW LS RA S Q L GV+ R++ G + +D NRR I++ Sbjct: 208 RNNWDLSALRAASVVQYLQDHFGVNPKRLTAG-GRGEYNPVTTNDTEVGKQRNRRTQIII 266 Query: 339 EDR 341 + Sbjct: 267 TPK 269 >gi|83814332|ref|YP_446691.1| chemotaxis protein [Salinibacter ruber DSM 13855] gi|83755726|gb|ABC43839.1| probable chemotaxis protein [Salinibacter ruber DSM 13855] Length = 241 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + R + A++ L L + + + + + GI + I D MF + L + Sbjct: 67 QSRARKRAEQYEQFLKRLEERGLGEKIQADLKKEGIHVVIADSL---MFRTGRARLLKPS 123 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG--VS 305 VL+++ +L+ + + GHTD P NW LS RA SA + L + Sbjct: 124 RTVLRELANLLSRDVGSVVVSGHTDDRPIGTRKFPSNWELSTARAASAVRFLQERAPEYD 183 Query: 306 EDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 R + G A + ++ D + NRR++I+ Sbjct: 184 SSRFQAV-GHASTDPRASNQTDEGRAKNRRVEIM 216 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 30/93 (32%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 W Y D MT+L+ FF+++ ++ + F + + + + Sbjct: 4 APFWMTTYGDIMTLLVTFFVLLISMSEIRMKKFRDAISNFQRQPGMFSGSKSVVPADYSS 63 Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 S+ + E K + +G Q Sbjct: 64 GSSQSRARKRAEQYEQFLKRLEERGLGEKIQAD 96 >gi|331002828|ref|ZP_08326342.1| hypothetical protein HMPREF0491_01204 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413317|gb|EGG92685.1| hypothetical protein HMPREF0491_01204 [Lachnospiraceae oral taxon 107 str. F0167] Length = 409 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 88/284 (30%), Gaps = 17/284 (5%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 ++ + + T G + + + + +++ N + + QY+ Sbjct: 129 AGQYSDGNQTVQTEGDGSGQYNDSEKGITIQRDADGSGQYLDSNKGIILQVDADGSGQYK 188 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 I ++ + KNS S + + + ++ Sbjct: 189 DDRYGINLQVDANGTGMYKNSQNDVSIAVDEEEVIYKAGDVVIEIKSDGSGSYENSATGL 248 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIV--------KGVLFETTRTGILISIIDQRNTPMF 237 + KI + AD + V I I +F Sbjct: 249 IIENDGQGKAVIKIDDDEKEVKADPLDFTYKLPLLNSVPAVPAIEANSIMITMDAG-VLF 307 Query: 238 DKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 D E+ L + +VL + I GHTD+ N LS +RA S Sbjct: 308 DVDKYDLRNESKETLNNLAKVLKEANISAFEIDGHTDSD---ADDAYNQTLSENRANSVK 364 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + L+ GV+ + +G+ R ++D NRR++I++ Sbjct: 365 EYLVSVGVTAN--ITTNGYGESRPVASNDTPEGKQQNRRVEIII 406 >gi|327405440|ref|YP_004346278.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327320948|gb|AEA45440.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 367 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 60/150 (40%), Gaps = 7/150 (4%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + D+ + V D+I + T + + + + F+ SI LP Sbjct: 220 VDDIFIGLEENKKPPVQDSIHEKANTVDTSINLTVGDVYVLHNLQFESGKSILLPNEYPE 279 Query: 252 LQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L+ + + GHTD + DN LSL+RA + Q L+ G+++++I Sbjct: 280 LENFIRHVEKYPNQTLLVTGHTDNVGNKG---DNKMLSLERANAIKQYLVAKGINKNKIV 336 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILV 338 I G +++ NRR++I + Sbjct: 337 -IEGKGDEIPLDSNETEEGRKKNRRVEISI 365 >gi|325523698|gb|EGD01964.1| OmpA family protein [Burkholderia sp. TJI49] Length = 226 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 5/107 (4%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAY 293 +F+ + LPE+ VL +I L T I + GHTD P N NW LS RA Sbjct: 119 LFNVGDARLLPESAPVLDRIALALGAHATGDILVEGHTDRVPIANAKYESNWELSSARAG 178 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 S + L + GV+ R++ + G A + +A D + NRR+ I V Sbjct: 179 SVVRYLAERGVAPHRLAAV-GRADTQPLVAGDDAASRARNRRVTIFV 224 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 18/36 (50%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIIN 55 + D G W I YAD +T LM FL ++++ Sbjct: 17 RDDEDAEGTQAGRWLISYADLVTTLMVLFLALYVLQ 52 >gi|330446544|ref|ZP_08310196.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490735|dbj|GAA04693.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 325 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 44/137 (32%), Gaps = 8/137 (5%) Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-T 263 V + ++ + + T F SS L + L Sbjct: 178 AYHWGAAAPIVEPVYVDQVTITTLEELKLTVPFAFDSSTITAGDAAKLAPFEQRLKDQGA 237 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 I + GHTD+ N +LS RA + L + V E RI G Sbjct: 238 AQIYVIGHTDSR---GSEAYNQKLSEKRAQAVADALRQHLNVGETRIIA-QGRGESDPVA 293 Query: 323 ASDPM--NSANRRIDIL 337 ++ + NRR+DI+ Sbjct: 294 SNQTEEGRAQNRRVDII 310 >gi|327481195|gb|AEA84505.1| flagellar motor protein MotB [Pseudomonas stutzeri DSM 4166] Length = 244 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 7/226 (3%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 ++++ + + G+ + + + Sbjct: 17 EPQREEEQEAWLITYLDMLTLLLVMLVIMLALAGKGDGEQNDPAASAMLAAGELGVALPA 76 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 P + +A ++ + + I I + + Sbjct: 77 PAAPIPSIAPVPTPAADAQPDDPQESMPTTPGMALGDDIQVIVNEGSISFRI---SSEIL 133 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295 F + + V+ ++ LA + I + GHTD P + NW LS RA S Sbjct: 134 FGSGRAELEDAGLEVIDRLVPTLAANAFRIVVEGHTDNLPIQTERFPSNWELSASRASSV 193 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + L +G+ R+S +G+A R + NRR++++++ Sbjct: 194 VRYLQLAGIEATRLSA-TGYADTRPLADNADERGRASNRRVELVMQ 238 >gi|152972417|ref|YP_001337563.1| putative outer membrane lipoprotein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206578997|ref|YP_002236080.1| OmpA family protein [Klebsiella pneumoniae 342] gi|238897010|ref|YP_002921755.1| putative outer membrane lipoprotein [Klebsiella pneumoniae NTUH-K2044] gi|262040618|ref|ZP_06013856.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288933077|ref|YP_003437136.1| OmpA/MotB domain protein [Klebsiella variicola At-22] gi|290511871|ref|ZP_06551239.1| outer membrane lipoprotein [Klebsiella sp. 1_1_55] gi|329999890|ref|ZP_08303557.1| OmpA family protein [Klebsiella sp. MS 92-3] gi|150957266|gb|ABR79296.1| putative outer membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206568055|gb|ACI09831.1| OmpA family protein [Klebsiella pneumoniae 342] gi|238549337|dbj|BAH65688.1| putative outer membrane protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041982|gb|EEW43015.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288887806|gb|ADC56124.1| OmpA/MotB domain protein [Klebsiella variicola At-22] gi|289775661|gb|EFD83661.1| outer membrane lipoprotein [Klebsiella sp. 1_1_55] gi|328538172|gb|EGF64327.1| OmpA family protein [Klebsiella sp. MS 92-3] Length = 220 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD +S+ P L + Sbjct: 80 YMDVQEAKLRDKMQGTGVSVTRNGDNIVLNM---PNNVTFDSNSANLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV+ +RI + +G Sbjct: 137 VLKEYEKTAVNVVGYTDST---GSKDLNMRLSQQRADSVASALITQGVAANRI-RTTGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|110637988|ref|YP_678195.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110280669|gb|ABG58855.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC 33406] Length = 517 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 7/131 (5%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGH 271 + V + + I Q N FD S S E+ L ++ +L ++ I I GH Sbjct: 390 QEVKQDLYLVPVEIGQTVQLNNIFFDVSKSTLRQESYAELDRLYLILQNNPVMEIEIDGH 449 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 TD N +LS DRA + L+K G++ RI GF + +++D Sbjct: 450 TDNV---GDPIINMQLSNDRANAVKDYLLKKGIAPGRIVT-KGFGGTKPIVSNDTEELKK 505 Query: 331 -NRRIDILVED 340 NRR++ + Sbjct: 506 LNRRVEFTILK 516 >gi|307718609|ref|YP_003874141.1| hypothetical protein STHERM_c09210 [Spirochaeta thermophila DSM 6192] gi|306532334|gb|ADN01868.1| hypothetical protein STHERM_c09210 [Spirochaeta thermophila DSM 6192] Length = 243 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 59/164 (35%), Gaps = 12/164 (7%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 ++ +R + L + +S + K V + G++I++ F +S+ Sbjct: 80 SLPSMERGRALDQARKKAISAFQPEIRAKTVRVKQDERGLVITLAAD---AFFRSASAEL 136 Query: 245 LPETIVVLQKIGEVLAHSTE----VISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQV 298 E L S E I I GHTD P NW LS RA + Sbjct: 137 NIEAARETLIKLSNLLTSPELEGRKIRIEGHTDDVPTDPAGPWPSNWELSSARAINVLHF 196 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L GV E+ ++ G A + NRRIDI++ Sbjct: 197 LSDYGVDENHF-QVMGLADTVPLADNSTPEGRAYNRRIDIVILS 239 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + K+ + + Y D +T+L+ FF++M+ D + I F Sbjct: 1 MAKEMQKKKKCDEGAPDYMLTYGDMVTLLLTFFVMMFTTATIDGYQLRLILSAF 54 >gi|153832075|ref|ZP_01984742.1| flagellar motor protein [Vibrio harveyi HY01] gi|148871690|gb|EDL70531.1| flagellar motor protein [Vibrio harveyi HY01] Length = 430 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 7/162 (4%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 K + L + V + + ISI Q +F+ Sbjct: 270 APAQVESTVKTDSQVTDIAERVSMYLATEISKGLVTVDALPDRVRISIKAQD---LFESG 326 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVL 299 S+ + V+ K+ L + I + GHTD P + NW LSL RA + + L Sbjct: 327 SAEVVEYIQPVISKLARTLEATEGKILVAGHTDDKPIFTSKYPSNWHLSLARATAMSEQL 386 Query: 300 MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 + + E R+ G R + + D + NRRI+I + Sbjct: 387 IANSALEGRVLP-EGLGDARPLVENTSDENRALNRRIEIDLM 427 >gi|327396585|dbj|BAK14006.1| putative OmpA-family membrane protein [Pantoea ananatis AJ13355] Length = 353 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 6/115 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285 +I+ + +FD S + +L + I + GHTD + + N Sbjct: 214 TIVRLDSMSLFDSGKSALKDGSTKMLVNSLVGIKAKPGWLIIVSGHTDNT---GNPQLNQ 270 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 LSL RA + + +G + + G+ R A+ + NRR++I + Sbjct: 271 ALSLKRAEAVRNWMRDTGGVPESCFAVQGYGESRPVAANGTPEGRALNRRVEISL 325 >gi|156973571|ref|YP_001444478.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116] gi|156525165|gb|ABU70251.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116] Length = 318 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T F +S+ PE+ L + L + + + G+TD A N ++S R Sbjct: 205 GTGSFALNSTTLKPESAAKLDDLVAFLNEYPQANVDVIGYTDT---SGPAAYNQKVSEKR 261 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A S L++ G+ DRI G + +++ NRR++++V Sbjct: 262 AESVAHALIEKGIDADRIHA-RGEGENNPIASNETREGREQNRRVEVVV 309 >gi|254463375|ref|ZP_05076791.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2083] gi|206679964|gb|EDZ44451.1| OmpA family domain protein [Rhodobacteraceae bacterium HTCC2083] Length = 222 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 57/171 (33%), Gaps = 10/171 (5%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + A+ + + + L V T +++S+ Sbjct: 56 DDSKERKQNAIKGALIGGAGGAVVGNVLDKQAAELQKSLGNDRVTITNTGDRLIVSLPQD 115 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F S+ L + L + + GHTD++ N LS+ Sbjct: 116 IT---FASDSATLSSGIQSDLNAVATNLQSYPNSTVQVIGHTDSTGEAG---YNQNLSVQ 169 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 RA S VL +GVS R+ I G + ++ + NRR++I++ Sbjct: 170 RANSVVNVLAGAGVSFTRLQGI-GRGEDQPVASNLTEEGKAQNRRVEIVIL 219 >gi|121610060|ref|YP_997867.1| OmpA/MotB domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121554700|gb|ABM58849.1| OmpA/MotB domain protein [Verminephrobacter eiseniae EF01-2] Length = 242 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ PE L + + + I GHTD+ N RLS+ RA Sbjct: 132 DAFFDFDKSVIKPEGKAKLDDLVSKVKDINLEVIIAVGHTDSV---GTDAYNQRLSVRRA 188 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L+ G+ ++R+ G + + + NRR++I V + Sbjct: 189 EAVKAYLVSKGIEKNRVYT-EGKGEKQPVADNKTSEGRAKNRRVEIEVVGTR 239 >gi|298372474|ref|ZP_06982464.1| OmpA family outer membrane protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275378|gb|EFI16929.1| OmpA family outer membrane protein [Bacteroidetes oral taxon 274 str. F0058] Length = 633 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 N F +S P++ + ++ L + +V I I GHTD N LS +R Sbjct: 528 NNIFFAFNSYELEPKSEREIMQLYSFLRKNPDVSIEIVGHTDNI---GGENFNQTLSENR 584 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 A + L++ G+ R+ G + +++ NRR++ +++ Sbjct: 585 ALAVMMALIEKGIDAGRLY-YRGMGLSQPIASNNTEEGREKNRRVEFVIK 633 >gi|296159938|ref|ZP_06842759.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] gi|295889921|gb|EFG69718.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] Length = 318 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 87/282 (30%), Gaps = 16/282 (5%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS---VDLKIGSTNQ 120 +I P + + G + +I + + +G Sbjct: 40 SIHTTILPPASSAPVGNAGPAVNTAGLASGTTGAGTGAITAAPPPANATPGQVVVGGKVP 99 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC---KSTDLEKSINKEENYFLPP 177 + + + + + + + K + + + Sbjct: 100 DEATKAAVLARLRDTYGAANVVDQIEVADVATPPNWSANVQKLIGPQLKQISKGQLKIDG 159 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + + + + Q LA +++ L+ I G+ + G+L + R F Sbjct: 160 TQIDVKGEVHNESQRQQLASDMANALNPTYT--IKNGLRVSASEQGLLDQTLANRTIE-F 216 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAY 296 + S+ P+ +L ++ + T I GHTD N LS RA + Sbjct: 217 ETGSATLTPQGRAILDQMAAAMMKMTNKTVAIIGHTDN---SGNRTSNIALSQARADAVK 273 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 L+ G+ +++ +G + ++D + NRRI+ Sbjct: 274 GYLVAKGIPPQQMTT-TGVGPDQPIASNDTTDGRARNRRIEF 314 >gi|170696413|ref|ZP_02887541.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] gi|170138674|gb|EDT06874.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] Length = 322 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 90/275 (32%), Gaps = 16/275 (5%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS---VDLKIGSTNQKKQYQRL 127 P + S G + ++ + + +G + + Sbjct: 51 PSPSSTTAGSAGPAVNTAGLASGTTGAGTGAVTASPPPANAAPGQVVVGGKVPDEATKAA 110 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC---KSTDLEKSINKEENYFLPPLSKEKIL 184 + + + + + K + + + + Sbjct: 111 VLARLRDTYGSANVVDQIEVADVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQIDVKG 170 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 ++ + + Q LA +++ L+ I G+ + G+L + R F+ S+ Sbjct: 171 EVRNESQRQQLASDMANALNPTYT--IKNGLRVSASEQGLLDQTLANRTIE-FETGSATL 227 Query: 245 LPETIVVL-QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 P+ +L Q +L +T+ ++I GHTD N LS RA + L+ G Sbjct: 228 TPQGRAILDQMAAAMLKMATKTVAIIGHTDN---SGNRTSNIALSQARADAVKGYLVAKG 284 Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + ++S +G + ++D + NRRI+ Sbjct: 285 IPPQQMST-TGVGPDQPIASNDTADGRARNRRIEF 318 >gi|3493603|gb|AAC33455.1| outer membrane protein homolog [Vitreoscilla sp. C1] Length = 217 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 53/145 (36%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L V I + + + F S L + Sbjct: 75 AYMDHQERQLRQSLANTQVEVNRVGDEIRLVMPESIT---FATGSYQLNSSASTSLNSVS 131 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VLA T+ +I GHTD++ N LS +RA + L+ V+ +RI+ + G Sbjct: 132 SVLAQYTDTTINIVGHTDST---GSDAINEPLSRNRASAVANYLVSRNVASNRITTV-GA 187 Query: 316 AHHRLKIASDP--MNSANRRIDILV 338 + +++ + NRR++I V Sbjct: 188 GCRQPVASNNTVAGRAENRRVEITV 212 >gi|306820526|ref|ZP_07454159.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551440|gb|EFM39398.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 432 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 89/274 (32%), Gaps = 14/274 (5%) Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 G + ++N ++ I+ K GS K + + + Sbjct: 161 LQTDGDGSGQYSDENIVIQTDGKGGGQYINNKTGITLQADKDGSGQYKDEKNDIVLQVDS 220 Query: 134 LSNSQQSEHCK----NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + Q S+ + S + + +Y L+ K K Sbjct: 221 DGSGQYSDGIRKISIMVGKDGSATYNYNTGEVLIRNHGDGTGSYRNETLNMIIYNEGKGK 280 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPE 247 ++ +KI L + + I + +I + +FD + + Sbjct: 281 ADIRVNGEKILVDAEPLEKAGKLPTLSPIPAVPPIEANSVMIKLDSGVLFDVNKYDIRED 340 Query: 248 TIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 VL K+ +VL E I GHTD+ N LS +RA S L+K+G++ Sbjct: 341 ANDVLMKLIDVLKKAKVEKFEIYGHTDSDD---TDEYNQVLSENRANSVKDFLVKNGITA 397 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + GF + + NRR++I++ Sbjct: 398 N--IATKGFGEKKPIATNSTKEGKQLNRRVEIII 429 >gi|170736167|ref|YP_001777427.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169818355|gb|ACA92937.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3] Length = 223 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 12/170 (7%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 L + A + ++ L + + G+ I I + Sbjct: 60 QTLARQAGGAATAAVDTAKADPAPPWLAL----LDSLKSNGRISLVKAPHGVEIGIDAK- 114 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI-ARDNWRLSLD 290 +F+ + LP++ VL +I + L+ T I + GHTD+ P N NW LS Sbjct: 115 --ILFNVGDARLLPDSSPVLNQIAQALSAHTTGDILVEGHTDSVPIANAKYESNWELSSA 172 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA S + L + GV+ R++ I G A + +A + NRR+ I V Sbjct: 173 RAGSVVRYLSERGVAPHRLAAI-GRADTQPLVAGGDAGSRARNRRVTIFV 221 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 3/75 (4%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + G W I YAD +T LM FL ++++ A++ + + A Sbjct: 13 RDDDELEGAQSGRWLISYADLITTLMVLFLALYVLQ---LAKYNALDARYQTLARQAGGA 69 Query: 80 SKGIFDEQNPPERSS 94 + D Sbjct: 70 ATAAVDTAKADPAPP 84 >gi|189347037|ref|YP_001943566.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245] gi|189341184|gb|ACD90587.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245] Length = 229 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 10/138 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 D V+G E GI + + +F S+ + ++++ ++ Sbjct: 82 QAAEIDRDVEGATVERMGEGIRVVF---DSGILFSTGSATITATSRDNIERLARIINRYD 138 Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GHTD N LS RA + +L GV R+S + G+ R Sbjct: 139 DTNVVIEGHTDTV---GNEESNQLLSEHRAEAVSNLLKAYGVYGSRLSPV-GYGESRPVA 194 Query: 323 ASDPMNSA--NRRIDILV 338 +++ + NRR++IL+ Sbjct: 195 SNETESGRRLNRRVEILI 212 >gi|32490782|ref|NP_871036.1| flagellar motor protein MotB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25165988|dbj|BAC24179.1| motB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 326 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 3/166 (1%) Query: 180 KEKILAMKRKKRLQDLAKKISSTL-SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + ++ K +RL + L + + + G+ I IID + PMF Sbjct: 101 ERELNHQKDIRRLNKTRYNLQQMLRNNPRLRDFQSNMKITLVHEGLRIEIIDSKKRPMFT 160 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAY 296 P +++ + VL IS+ GHTD P+ N NW LS DRA ++ Sbjct: 161 TGGKEIAPYMRYIMRILAPVLNELPNRISLAGHTDNQPYINGERGYSNWELSADRANASR 220 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + L++ G+ D+I ++ G A+ + +++ RRI I++ +Q Sbjct: 221 RELIEGGLMNDKILRVIGMANTMSDVNKHHHHASQRRISIIILTKQ 266 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 47/94 (50%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +I+ + + ++ GSWKI YADFMT +MAFFLVMW+++ + ++ I YF Sbjct: 3 KNSPMILIRWKKSQHSGHHGGSWKIAYADFMTAMMAFFLVMWLLSTSTPQQREQIADYFR 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104 K+ + S P + + ID + Sbjct: 63 IPMKDSVQNSSKSSISPIPMPKQGGDNIDNKTNN 96 >gi|222053440|ref|YP_002535802.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] gi|221562729|gb|ACM18701.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] Length = 455 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P+ ++K+ + + V + GHTD A N +LS RA + Sbjct: 346 FVTGKNDIQPKYAGEIKKVADYMQKYPTVKGVIEGHTDNV---GSAAANMKLSQRRAEAV 402 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L+ K G++ DR++ G+ R + NRRI +++ Sbjct: 403 RSYLIKKHGIAADRLTA-KGYGMTRPIADNGTEAGRQQNRRITAVLDS 449 >gi|319638563|ref|ZP_07993325.1| hypothetical protein HMPREF0604_00949 [Neisseria mucosa C102] gi|317400312|gb|EFV80971.1| hypothetical protein HMPREF0604_00949 [Neisseria mucosa C102] Length = 226 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L + E I + + + F S+ + L + Sbjct: 76 YMDYQEKKLRQSLANTNIEVERQGNQIKLVMPENVT---FATGSAALSGQAQSALSAAAQ 132 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +I GHTD + N LS +RA S L GVS R+S G+ Sbjct: 133 TLVQYPDTTLTINGHTDNT---GNDAINEPLSRNRAESVATFLQSRGVSSTRLSTF-GYG 188 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 + ++ + NRR++IL+ Q Sbjct: 189 SRQPIASNATVEGRAQNRRVEILINPDQ 216 >gi|154252545|ref|YP_001413369.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154156495|gb|ABS63712.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1] Length = 338 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 90/250 (36%), Gaps = 21/250 (8%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 D +T +K + L ++ ++ SE + ++ ++ Sbjct: 90 DSLAAATAEKDRLASLADDASGTRVAELEGKLAEEQKLSSEALSQVELLNQQISALRRQL 149 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID- 230 L ++ +++ ++ DL +++++ L+ V + F IL D Sbjct: 150 ATLEAALEAAELKDREQQVQIADLGRRLNAALAQKVQELAKYRSEFFGRLRAILGDRQDI 209 Query: 231 --------QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDA 274 ++ F+ S+ P L KI + V+ + GHTDA Sbjct: 210 EIVGDRFAMQSEIFFESGSADINPSGKEQLDKIATAVREIAAEIPDDIPWVLRVDGHTDA 269 Query: 275 SPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSAN 331 +P NW LS RA + L++ GV ++R+ GF + N N Sbjct: 270 NPIATAQFPSNWYLSSARAIAVVNYLVERGVPQNRLVAA-GFGQYHPLADGRGTAENRRN 328 Query: 332 RRIDILVEDR 341 RRI+ + +R Sbjct: 329 RRIEFKLTER 338 >gi|114777572|ref|ZP_01452553.1| motb protein [Mariprofundus ferrooxydans PV-1] gi|114552043|gb|EAU54560.1| motb protein [Mariprofundus ferrooxydans PV-1] Length = 232 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 13/200 (6%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 T ++ K+ + S K E +PPL +K+++ + + + + + Sbjct: 40 STMDKTGLADIEASFRKAVSVLNSGTKTELQIIPPLQMQKLISPRE--LMLAMRQNSRAI 97 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + + D+ V+GV R + I + +FD+ S++ PE++ L K+ ++LA S Sbjct: 98 MKNSIMDHKVRGV-ILNDRLYLRI-----PDAILFDRGSAVLKPESVKTLVKLAQMLAMS 151 Query: 263 TEVISIRGHTDA--SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 I ++GHT+A + D W LSL RA S +L GVS R+ ++G+ + Sbjct: 152 PGNIRVQGHTNANIDLDNSAFDDPWSLSLARAASVLHILEDEGVSPTRL-SLAGYGPSQP 210 Query: 321 KIASDP--MNSANRRIDILV 338 S NRR++I+V Sbjct: 211 ISTEATPFGRSKNRRVEIMV 230 Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 30/71 (42%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + N +W +AD +++++ FF+++ ++ D IE F L + Sbjct: 4 KKKWPVEYQANTEAWMTTFADLVSLMLTFFILLISMSTMDKTGLADIEASFRKAVSVLNS 63 Query: 79 ASKGIFDEQNP 89 +K P Sbjct: 64 GTKTELQIIPP 74 >gi|29348538|ref|NP_812041.1| putative flagellar motor protein MotB [Bacteroides thetaiotaomicron VPI-5482] gi|253569097|ref|ZP_04846507.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29340443|gb|AAO78235.1| putative flagellar motor protein MotB [Bacteroides thetaiotaomicron VPI-5482] gi|251841116|gb|EES69197.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 280 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 89/217 (41%), Gaps = 19/217 (8%) Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 Q S K L ++ G + + + + E+ LS++K +R++ + +L Sbjct: 49 GDQLSAQIKKLLRDTTQMGNSIRQYQSMLSTNMTEQEKLNALLSQKKNELSERERTINEL 108 Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 I++ + + + + +++ D+ +F S+ Sbjct: 109 QDMINAQNEKVKQLLNSVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302 L K+ EVL T++ I GHTD P +DNW LS+ RA S ++L+K+ Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 GV+ +I + SG + ++ NRR +I+ Sbjct: 226 GVNPLQI-QPSGRGEYMPVDDNETAEGRSKNRRTEII 261 >gi|255530070|ref|YP_003090442.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366] gi|255343054|gb|ACU02380.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366] Length = 445 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 6/101 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ +SS+ ++ L K+ VL + ++++G+ + A N +LS DRA S Sbjct: 345 FEFNSSVLKTDSYPTLDKLSSVLRENGGKVTVKGYASSE---GTAAYNLKLSKDRANSVK 401 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L+ SGV+ ++ G+ ++D NRR++ Sbjct: 402 TYLVNSGVNASQVVT-KGYGEANPIASNDTEEGRIQNRRVE 441 >gi|325524318|gb|EGD02423.1| OOP family OmpA-OmpF porin [Burkholderia sp. TJI49] Length = 254 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 82/259 (31%), Gaps = 18/259 (6%) Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR- 149 S IT + G + L + + N + + Sbjct: 1 AAGSVVHGTAGTAGTITPPPANATPGQVVVGGKVPDEATKAAVLQKLRDTYGAANVVDQI 60 Query: 150 -------DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 ++ K + + + E + + + Q LA +++T Sbjct: 61 EVGDVATPPNWSANVQKLLGPQLKQISKGQLKINGTQIEMKGEVHNEAQRQQLASDMANT 120 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L+ I G+ + G+L + R F+ S+ P+ +L ++ LA Sbjct: 121 LNPTYT--IRNGLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGKQILDQMAAALAKM 177 Query: 263 TEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I GHTD N LS RA + L+ ++ +++ +G + Sbjct: 178 PNRTVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITKSIAPQQMTT-TGVGPDQPI 233 Query: 322 IASDPM--NSANRRIDILV 338 +D + NRRI+ V Sbjct: 234 APNDTAEGRARNRRIEFRV 252 >gi|317060136|ref|ZP_07924621.1| outer membrane protein [Fusobacterium sp. D12] gi|313685812|gb|EFS22647.1| outer membrane protein [Fusobacterium sp. D12] Length = 193 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A V + I + + F S+ L I +VL Sbjct: 54 DQQEAALRASLKNTAVQVQRDGENISLYL---PGGVTFASDSAQISGNFYSALNSIAQVL 110 Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E ++GHTD++ + N LS RA S Q L+ GV+ +R++ GF + Sbjct: 111 VQYPETQILVQGHTDST---GSFQHNMDLSNRRANSVKQYLIGQGVASNRLTS-QGFGPN 166 Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341 + NRR++I + + Sbjct: 167 NPVADNSTPEGRQMNRRVEIKIAPK 191 >gi|289675211|ref|ZP_06496101.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5] gi|330896025|gb|EGH28248.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT] gi|330936859|gb|EGH41006.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B] gi|330975430|gb|EGH75496.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 260 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 82/240 (34%), Gaps = 13/240 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 TK + +L+ +N + ++ + + D+ K L Sbjct: 21 ATKPNPNLEQARSNFTALQTNPQATQVAALETKDASEWLTKAEQAFRNDDDVQKVDQLSY 80 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N+ ++ A + ++ + + + + T G L Sbjct: 81 LTNQRIELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 ++ D +FD + + P + K+ L + + + G+TD++ A N Sbjct: 139 VTFGD----VLFDYNKAELKPTAQGDIGKLAGFLQENPDRKVIVEGYTDST---GSASYN 191 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 LS RA S L++ GV RI + G+ + + + NRR+++ + + Sbjct: 192 QSLSERRANSVRMALVRMGVDPARIVTM-GYGKEYPVADNSSNSGRAMNRRVEVTISNDN 250 >gi|218885327|ref|YP_002434648.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756281|gb|ACL07180.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 345 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 10/149 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L + + + + +I + + F +S+ Sbjct: 201 PELLANEAALDKFVRDVFYEEKAAPAAAAAAPMDEVIVLRSIQ----FALNSAKLDATAT 256 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L + +L + + GHT + N +LS RA S L+K GV R+ Sbjct: 257 SILVETAAILKSKKGSVEVAGHTCSL---GTDEYNQKLSEARAKSVKDFLVKQGVESSRL 313 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDI 336 G+ + K + + NRR+++ Sbjct: 314 IT-KGYGESKPKYDNSTEETRKLNRRVEL 341 >gi|255033902|ref|YP_003084523.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254946658|gb|ACT91358.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 638 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 50/134 (37%), Gaps = 7/134 (5%) Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 +N + E I + N F I ++ V L K+ + L + Sbjct: 505 SFTVNNEQSFINLEIPLEAIEKDRAEVLNNIFFKTGEYILDDKSKVELDKMSDFLHKNKT 564 Query: 265 VI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 + I GHTD +N LS RA S L +SG++ DRI G+ K Sbjct: 565 IKIEISGHTDDV---GSDTENMALSQRRAQSVQYYLQQSGIAADRILA-KGYGETTPKAP 620 Query: 324 SDP--MNSANRRID 335 +D NRRI+ Sbjct: 621 NDSDENRQKNRRIE 634 >gi|121605683|ref|YP_983012.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120594652|gb|ABM38091.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2] Length = 210 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ P L + + + I GHTD+ N +LS+ R+ Sbjct: 100 DAFFDFDKSVIKPAGKEKLDDLIGKIKDINLEVIIAVGHTDSV---GSDSYNQKLSVRRS 156 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + L+ G+ ++R+ G + + + NRR++I V + Sbjct: 157 EAVKAYLVSKGIEKNRVYT-EGKGEKQPVADNKTAEGRAKNRRVEIEVVGTR 207 >gi|108756980|ref|YP_628607.1| OmpA family protein [Myxococcus xanthus DK 1622] gi|108460860|gb|ABF86045.1| OmpA family protein [Myxococcus xanthus DK 1622] Length = 409 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 99/274 (36%), Gaps = 9/274 (3%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 + + L A + ++S Q+ + + + + Q ++ + Sbjct: 122 AELDAARQQLAQAERERLQALQQQQQSRQHAVTQQQEAERMRMDAQRRQHEAEQLRRLAQ 181 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + + + + R + + + + + + + ++ ++ Sbjct: 182 QQEAESRRLAEKTTRLQEEAQRRARAESESRRLAQENHELLQRSAELEAEQEARRQVERE 241 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 ++R L + +T + ++ + V G+++++ +F ++ LP Sbjct: 242 LERERQARLDAEQRATEALTQLESTARDVKVREEERGLVLTM---SGQVLFASNAVDLLP 298 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L ++ L S + I GHTD+ N LS RA + L+ GVS Sbjct: 299 TAREQLTEVAHALKVSDSPMVIEGHTDSM---GSDAMNEALSYRRAEHVREFLISQGVSR 355 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 DRI ++ G +R + NRR++I++ Sbjct: 356 DRI-QVRGLGEYRPVANNSTPEGRANNRRVEIIL 388 >gi|146278244|ref|YP_001168403.1| hypothetical protein Rsph17025_2208 [Rhodobacter sphaeroides ATCC 17025] gi|145556485|gb|ABP71098.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 525 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 91/297 (30%), Gaps = 16/297 (5%) Query: 58 DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 + A+ K + + R++ + + + + + G Sbjct: 232 SETELTAMTLALEEQRKRAEETLTLLAAARTDAARAATEAEERAAALAAAREVLASREGE 291 Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + + L N +Q ++ + L +N Sbjct: 292 GAEAARRVALLNEQVAALRAQLGSLQGLLDAAQERDEENRVQLQSLGTQLNSALAQVAAE 351 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + L + RL+ K + S + VL I+ + +F Sbjct: 352 QKRRAELEEAERLRLEARNKDLERFRSEFFGQL--RQVLAGREGVRIVGDRFVFSSEVLF 409 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASPFRN--IARDNWRL 287 + S+ E + + L+ +I + GHTD P RDNW L Sbjct: 410 EPGSAQLASEGRTQISGVTRTLSEIREQIPEGIDWIIRVDGHTDDVPLSGFGAFRDNWEL 469 Query: 288 SLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 S RA S + + + G R+ +GF +R + + NRRI++ + +R Sbjct: 470 SSARALSVVRYMQQTLGFPPSRL-AATGFGEYRPVVEGSSPEARAQNRRIELKLTER 525 >gi|115358234|ref|YP_775372.1| hypothetical protein Bamb_3484 [Burkholderia ambifaria AMMD] gi|115283522|gb|ABI89038.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 432 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 10/167 (5%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + K+ + + L + V + ++ R Sbjct: 269 SRSADVQKQIADIARMTPPPAPPQLHLKQLLQD---EIAAGTVSVDEDARHSAVTF---R 322 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDR 291 MF + ++ KI +A ++I G+TD P R+ N LS +R Sbjct: 323 GDAMFKPGGASVQASMNPLIAKIATEIAKVPGKVTIIGYTDKVPIRSRHFASNQVLSEER 382 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 A Q+L +GV +R+ + G + + NRR++I Sbjct: 383 ATQVMQMLQAAGVPANRLEAV-GKGDAHPVGDNRTAQGRAQNRRVEI 428 >gi|327404889|ref|YP_004345727.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327320397|gb|AEA44889.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 688 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 7/129 (5%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD 273 V I I FD + + PE+ ++++ +++ I I GHTD Sbjct: 563 VNKVIELKNIAIGSKIALRNIFFDVNKATLRPESNAEMERLVQLMKDVPRLKIEISGHTD 622 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--N 331 + A N LS RA + L+ G++ +R+ G+ + +++ + N Sbjct: 623 NT---GSATLNETLSQQRAEAVVAYLVSKGIAANRMIA-KGYGSSQPIASNNSEDGKQQN 678 Query: 332 RRIDILVED 340 RR + ++ Sbjct: 679 RRTEFEIKG 687 >gi|294649621|ref|ZP_06727038.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194] gi|292824498|gb|EFF83284.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194] Length = 217 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + FD + S P L K+ +VL + I + G+TD + N LS Sbjct: 108 PGSITFDTNKSNIKPNFYATLNKVAQVLGEDNQSAILVTGYTDNT---GNDSINIPLSQA 164 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA S L G++ +RI G+ + NRR++I + +Q Sbjct: 165 RAQSVKNYLAGKGIASNRIDA-QGYGSSNPIADNSTAAGREQNRRVEISIYAKQ 217 >gi|91787678|ref|YP_548630.1| OmpA/MotB [Polaromonas sp. JS666] gi|91696903|gb|ABE43732.1| OmpA/MotB [Polaromonas sp. JS666] Length = 214 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ PE L + + + I GHTD+ N +LS+ R+ Sbjct: 103 DAFFDFDKSVIKPEGKAKLDDLIGKIKDINLEVIIAVGHTDSV---GSDTYNQKLSVRRS 159 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + L+ G+ ++R+ G + + + NRR++I V + Sbjct: 160 EAVKAYLVSKGIEKNRVYT-EGKGEKQPVADNKTAEGRAKNRRVEIEVVGTR 210 >gi|78065049|ref|YP_367818.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383] gi|77965794|gb|ABB07174.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 320 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 35/266 (13%), Positives = 76/266 (28%), Gaps = 13/266 (4%) Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + + T + +G + + + Sbjct: 60 TGAAPGTASGAVVHGTAGTANTLTPPPATATPGQVVVGGKVPDEATKAAVLQKLRDTYGA 119 Query: 139 QSEHCKNSLTRDSEKGKDLC---KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + + + K + + + E + + + Q L Sbjct: 120 TNVVDQIEVGDVATPPNWSANVQKLLGAQLKQISKGQLKINGTQIEMKGEVHNEAQRQQL 179 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 A +++TL+ V ++ T F+ S+ P+ ++L ++ Sbjct: 180 ASDMANTLNPTYTIKNGLRVSASEQG---VLDQTLANRTIEFETGSATLTPQGRLILDQM 236 Query: 256 GEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 LA I GHTD N LS RA + L+ + +++ +G Sbjct: 237 AAALAKMQNRTVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITKSILPQQMTT-TG 292 Query: 315 FAHHRLKIASDPM--NSANRRIDILV 338 + +D + NRRI+ V Sbjct: 293 VGPDQPIAPNDTADGRARNRRIEFRV 318 >gi|221068229|ref|ZP_03544334.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1] gi|220713252|gb|EED68620.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1] Length = 215 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ P L + + + I GHTD+ N +LS+ RA Sbjct: 105 DAFFDFDKSVLKPAGKAKLDDLTGKIKDINLEVIIAVGHTDSI---GSDAYNQKLSVRRA 161 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + L+ G+ + R+ G + ++ + NRR++I V + Sbjct: 162 EAVKAYLVSKGIEKSRVYT-EGKGKKQPVASNATAAGRAQNRRVEIEVVGTK 212 >gi|50084108|ref|YP_045618.1| putative outer membrane protein [Acinetobacter sp. ADP1] gi|49530084|emb|CAG67796.1| putative outer membrane protein [Acinetobacter sp. ADP1] Length = 217 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 54/148 (36%), Gaps = 9/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV G + ++ FD + S P L K+ + Sbjct: 76 YLDQKEKKLRQQMAGTGVEVNRNPDGSVGLVM--PGNITFDTNKSNIKPNFYSTLNKVAQ 133 Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 LA + I + G+TD + N LS RA S L GVS RI+ G+ Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVANYLSGQGVSSSRINA-QGYG 189 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 ++ NRR++I + +RQ Sbjct: 190 SSNPIASNATAQGREQNRRVEISIYERQ 217 >gi|305432269|ref|ZP_07401432.1| fibronectin-binding protein [Campylobacter coli JV20] gi|304444617|gb|EFM37267.1| fibronectin-binding protein [Campylobacter coli JV20] Length = 332 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD P +++I ++L + +I GHTD N +LS RA S Sbjct: 229 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 285 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 + L K GV + RI + G+ + + ++D NRR++ Sbjct: 286 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKEGRADNRRVE 326 >gi|255594982|ref|XP_002536202.1| conserved hypothetical protein [Ricinus communis] gi|223520472|gb|EEF26178.1| conserved hypothetical protein [Ricinus communis] Length = 113 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 6/108 (5%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F+ + S P+ + ++ VL+ + + + + GHTD N +LS RA S Sbjct: 1 VLFNFNESSLRPDAGPAIARVVVVLSRTQKPMIVEGHTDNV---GTREYNQQLSEARAKS 57 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L + G+S RI+ + G+A R +D + NRR +I+V+ Sbjct: 58 VANELERRGISASRITLV-GYAFDRPVADNDTPEGRARNRRTEIVVKG 104 >gi|197117764|ref|YP_002138191.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem] gi|197087124|gb|ACH38395.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem] Length = 468 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 8/110 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD +I PE + ++G + ++ GHTD N LS RA Sbjct: 234 HGEFDIDKAIIRPEYKEEIAQVGNFMKKYPTTTAVIEGHTDNV---GSYNHNQDLSQRRA 290 Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339 + L++ G+ R+S G+ R + NRRI+ +++ Sbjct: 291 EAVVNYLVEQYGIERSRLSA-KGYGFTRPIADNATDEGKQKNRRIEAIID 339 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 53/151 (35%), Gaps = 11/151 (7%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVL 252 + N + + ++ D+ + FD + + + Sbjct: 317 RPIADNATDEGKQKNRRIEAIIDCAFDVQQVTPPDRLCMALVLDFDAGKADVKSQYRNEI 376 Query: 253 QKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 K+ + + ++ GHTD + N +LS RA + L+ + G+ R+S Sbjct: 377 AKVADYMKRYNTTTAVIEGHTDNT---GSPEKNMKLSQQRAQNVVNYLVDNFGIERSRLS 433 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVE 339 G+ R ++ NRRI+ +++ Sbjct: 434 A-KGYGATRRISYNNTPEGRQKNRRINAVID 463 >gi|298386938|ref|ZP_06996492.1| flagellar motor protein MotB [Bacteroides sp. 1_1_14] gi|298260088|gb|EFI02958.1| flagellar motor protein MotB [Bacteroides sp. 1_1_14] Length = 280 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 89/217 (41%), Gaps = 19/217 (8%) Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 Q S K L ++ G + + + + E+ LS++K +R++ + +L Sbjct: 49 GDQLSAQIKKLLRDTTQMGNSIRQYQSMLSTNMTEQEKLNALLSQKKNELSERERTINEL 108 Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 I++ + + + + +++ D+ +F S+ Sbjct: 109 QDMINAQNEKVKQLLNSVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302 L K+ EVL T++ I GHTD P +DNW LS+ RA S ++L+K+ Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 GV+ +I + SG + ++ NRR +I+ Sbjct: 226 GVNPLQI-QPSGRGEYMPVDDNETAEGRSKNRRTEII 261 >gi|229163499|ref|ZP_04291450.1| OmpA/MotB domain protein [Bacillus cereus R309803] gi|228620068|gb|EEK76943.1| OmpA/MotB domain protein [Bacillus cereus R309803] Length = 233 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 84/207 (40%), Gaps = 9/207 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +Q S K+ + + K+ A +++ + +L Sbjct: 24 KQMAVAFRSELAGGTGNKEFLSDQKPNEEKELSASSLESEKMKKNAEAEVKQQEMNELKA 83 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + + T G+ ++I++ +FD + E++ + +++ Sbjct: 84 VQKGIDKYIEENKLSSSFKTDLTEKGLKVTILEN---VLFDSGKADVKLESLNIAKEMSN 140 Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314 +L + S I++ GHTD P N NW LS RA + QVL+++ + ++ S + G Sbjct: 141 LLVSTSPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAV-G 199 Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339 + +R +D + NRR+++ + Sbjct: 200 YGEYRSIAPNDTQEGKAKNRRVEVFIL 226 >gi|71066360|ref|YP_265087.1| OmpA/OmpF family outer membrane protein [Psychrobacter arcticus 273-4] gi|71039345|gb|AAZ19653.1| outer membrane protein, OmpA/OmpF family [Psychrobacter arcticus 273-4] Length = 217 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 9/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV G + ++ + F + L K+ Sbjct: 73 YMERQAKQLEQQMAGTGVTVTPNANGNIDLVM--PGSITFSFDDATLNNSFKPTLDKLAA 130 Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + I+I GHTD+ + N +LS DRAY+ L GV+ +RI+ + + Sbjct: 131 TMNEYNQNTITIAGHTDS---KGTDAYNMKLSRDRAYAVANYLSARGVASNRIN-VVAYG 186 Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342 R ++ NRR+++ V Q Sbjct: 187 ESRPVADNNSEYGRQQNRRVELTVNAPQ 214 >gi|269967472|ref|ZP_06181529.1| hypothetical protein VMC_29590 [Vibrio alginolyticus 40B] gi|269827913|gb|EEZ82190.1| hypothetical protein VMC_29590 [Vibrio alginolyticus 40B] Length = 430 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 7/159 (4%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + A L + + E + + IS+ Q +F+ Sbjct: 270 QPQQLNQDATSESKSAPIAEKISMYLATEIGKGLINVEPLQDRVRISLKSQD---LFESG 326 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVL 299 S+ + V+ K+ L + I + GHTD P + NW LSL RA + + L Sbjct: 327 SADVVAYIQPVISKLARTLESTQGKIIVTGHTDDRPIFTSKYPSNWHLSLARATAMSEQL 386 Query: 300 MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 + + E R+ G R + + D + NRRI+I Sbjct: 387 ISNSALEGRVIP-EGLGDARPLVENSSDENRAINRRIEI 424 >gi|260427879|ref|ZP_05781858.1| OmpA/MotB domain protein [Citreicella sp. SE45] gi|260422371|gb|EEX15622.1| OmpA/MotB domain protein [Citreicella sp. SE45] Length = 627 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 89/248 (35%), Gaps = 16/248 (6%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 + + + G Q+ + + S + + + +++ Sbjct: 381 SDTEGRAGEAEQRAGAAERQTELLNQQVSALRTQLSQLQGLLDDAKERDVDAQVQLQNLG 440 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 E N L ++ E+ + ++ + + + L ++ + + G+ I Sbjct: 441 SELNAALARVAAEERRRRQLEEAERQRLEDQAKDLERYRSEFFGRLREVIGNQEGVRIEG 500 Query: 229 IDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASP-- 276 + +F + + + KI +L + +I + GHTD P Sbjct: 501 DRFVFSSEVLFAPGEAELSRSGQMEIAKIASILRNVMADIPEGLDWIIRVDGHTDDIPLR 560 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333 DNW LS RA S + L+ G+ DR+S +GF ++ SD + NRR Sbjct: 561 PGARFSDNWELSQARALSVVRYLVDFLGIPPDRLSA-NGFGQYQPIDPSDTADARAQNRR 619 Query: 334 IDILVEDR 341 I++ + +R Sbjct: 620 IELKLTER 627 >gi|225382176|gb|ACN89316.1| hypothetical protein VEPGS_0610 [Vibrio alginolyticus] Length = 430 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 7/159 (4%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + A L + + E + + IS+ Q +F+ Sbjct: 270 QPQQLNQDATSESKSAPIAEKISMYLATEIGKGLINVEPLQDRVRISLKSQD---LFESG 326 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVL 299 S+ + V+ K+ L + I + GHTD P + NW LSL RA + + L Sbjct: 327 SADVVAYIQPVISKLARTLESTQGKIIVTGHTDDRPIFTSKYPSNWHLSLARATAMSEQL 386 Query: 300 MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 + + E R+ G R + + D + NRRI+I Sbjct: 387 ISNSALEGRVIP-EGLGDARPLVENSSDENRAINRRIEI 424 >gi|91224571|ref|ZP_01259832.1| hypothetical protein V12G01_07518 [Vibrio alginolyticus 12G01] gi|91190459|gb|EAS76727.1| hypothetical protein V12G01_07518 [Vibrio alginolyticus 12G01] Length = 430 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 7/159 (4%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + A L + + E + + IS+ Q +F+ Sbjct: 270 QPQQLNQDATSESKSAPIAEKISMYLATEIGKGLINVEPLQDRVRISLKSQD---LFESG 326 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVL 299 S+ + V+ K+ L + I + GHTD P + NW LSL RA + + L Sbjct: 327 SADVVAYIQPVISKLARTLESTQGKIIVTGHTDDRPIFTSKYPSNWHLSLARATAMSEQL 386 Query: 300 MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 + + E R+ G R + + D + NRRI+I Sbjct: 387 ISNSALEGRVIP-EGLGDARPLVENSSDENRAINRRIEI 424 >gi|89900364|ref|YP_522835.1| OmpA/MotB [Rhodoferax ferrireducens T118] gi|89345101|gb|ABD69304.1| OmpA/MotB [Rhodoferax ferrireducens T118] Length = 212 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ PE L + + + I GHTD+ N +LS+ R+ Sbjct: 104 DAFFDFDKSVLKPEGKAKLDDLVGKVKDINLEVIIAVGHTDSV---GSNAYNQKLSVRRS 160 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L+ G+ ++R+ G + + + NRR++I V + Sbjct: 161 EAVKAYLVSKGIEKNRVYT-EGKGELQPVADNKTKEGRAKNRRVEIEVVGTR 211 >gi|317505336|ref|ZP_07963264.1| OmpA family protein [Prevotella salivae DSM 15606] gi|315663550|gb|EFV03289.1| OmpA family protein [Prevotella salivae DSM 15606] Length = 284 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 80/232 (34%), Gaps = 14/232 (6%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 Q + + + S +Q K + + + + + Sbjct: 41 QNTKEELAASKARVASLEEQLAQQKKDFAALQGSLDKSLLNANANNINISKLVDQINESN 100 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + ++ K + L +++ L+ ++ +K V + + IS+ D ++ Sbjct: 101 QYIRHLVEVKSKSDSLNLVLTNNLTRSLSREEMKEVDVRVLKGVVYISLADNM---LYRS 157 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRA 292 S L KI +++ + I G+TD P + R+NW LS RA Sbjct: 158 GSYEINDRAEETLGKIAKIIMDYKDYDVLIEGNTDNVPVNTKSAAMKNIRNNWDLSALRA 217 Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 S Q L GVS R++ G + +D NRR I++ + Sbjct: 218 SSVVQYLQDHFGVSPKRLTAG-GRGEYNPVATNDTELGKQRNRRTQIIITPK 268 >gi|262195177|ref|YP_003266386.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262078524|gb|ACY14493.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 490 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 83/288 (28%), Gaps = 18/288 (6%) Query: 55 NATDDDTKKAIEQYF---NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111 TD + + F P + T GIFDE + ++ + D+ + Sbjct: 184 GTTDLEVLLGFYKSFGVVPPPPPPMDTDGDGIFDESDQCPNEPEDMDGNADDDGCPEEEP 243 Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + N + + C + + +D + + Sbjct: 244 PADTDGDGMTDDVDQCPNEAEDVDGFSDEDGCPDLDNDGDGIPDASDQCSDSAEDPDGFA 303 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + P + A+ G + + Sbjct: 304 DEDGCPDEDNDGDGIVDAADQC--------MNEPETANGYQDGDGCPDEIPEEVKNYTGS 355 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F +S LP + VL + +L + + I GH+D N LS Sbjct: 356 IEGIRFANNSDRILPVSRKVLDEAARILVEYPDLRVEISGHSDDR---GKRDFNIDLSKR 412 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + L+ GV + R+ + GF R + + + + NRR++ Sbjct: 413 RAEAVRVYLVGKGVEDSRLVSM-GFGPDRPLVENTSNANRAKNRRVEF 459 >gi|257458255|ref|ZP_05623405.1| OmpA family protein [Treponema vincentii ATCC 35580] gi|257444365|gb|EEV19458.1| OmpA family protein [Treponema vincentii ATCC 35580] Length = 436 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 12/167 (7%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 K+ + + + + D + + + + I I++ D R F Sbjct: 278 DKDTLQVSPTYPLADEQFYFMYRDIEKFFLDREPESITVKAPKNIIKITMYDIR----FV 333 Query: 239 KSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 S+ LP+ L I E L I GHT R LSL RA Sbjct: 334 ADSAEILPDETGRLDVIAEALKKVGPNTHFLIEGHTANLNRPEGER---ILSLQRADKIA 390 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 + L K G+ R+ G+ R +D + NRR++I + Sbjct: 391 EELAKRGIEASRMETA-GYGATRPIAPNDTAENRAKNRRVEITILRD 436 >gi|332879337|ref|ZP_08447034.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682757|gb|EGJ55657.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 422 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 6/106 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD S E+ L ++ L + I ++GHTD N +LS RA + Sbjct: 321 FDFGKSTIKTESYAYLNRLANTLVRTHARIEVKGHTDNV---GTEEFNMKLSHKRAQAVV 377 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L+ GV +D++ S + + +D NRR++ + Sbjct: 378 DYLIGRGVDKDKL-SYSYYGMSKPLTTNDTEEGRTMNRRVEFEILK 422 >gi|148266343|ref|YP_001233049.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4] gi|146399843|gb|ABQ28476.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4] Length = 454 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + PE + K+G+ + ++ GHTD A N LS RA S Sbjct: 223 FDIDKADIRPEYHDEVAKVGDFMKKYPTTTTVIEGHTDNV---GTAEYNMGLSQRRAESV 279 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L++ G+ R+S G+ R + NRRI+ +++ Sbjct: 280 VNYLVEKFGIENSRLSA-KGYGLTRPVADNSTNEGKQLNRRIEAIID 325 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + P+ + K+G+ + + I GHTD + N +LS +RA + Sbjct: 347 FDTGKADIKPQYREEIAKVGDYMKKYPTTTAAIEGHTDNV---GGSEYNMKLSQERAENV 403 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+++ G+ R+S G+ R ++ NRRI+ +++ Sbjct: 404 VNYLVENFGIERSRLSA-KGYGFTRRIAYNNTAEGRQKNRRINAVID 449 >gi|315917803|ref|ZP_07914043.1| outer membrane protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691678|gb|EFS28513.1| outer membrane protein [Fusobacterium gonidiaformans ATCC 25563] Length = 204 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 10/145 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A V + I + + F S+ L I +VL Sbjct: 65 DQQEAALRASLKNTAVQVQRDGENISLYL---PGGVTFASDSAQISGNFYSALNSIAQVL 121 Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E ++GHTD + + N LS RA S Q L+ GV+ +R+ GF + Sbjct: 122 VQYPETQILVQGHTDNT---GSFQHNMDLSNRRANSVKQYLIGQGVASNRLMS-QGFGPN 177 Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341 + + NRR++I + + Sbjct: 178 NPVADNSTPDGRQMNRRVEIKIAPK 202 >gi|153834458|ref|ZP_01987125.1| outer membrane protein OmpA [Vibrio harveyi HY01] gi|148869154|gb|EDL68186.1| outer membrane protein OmpA [Vibrio harveyi HY01] Length = 318 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T F +S+ PE+ L + L + + + G+TD A N ++S R Sbjct: 205 GTGSFALNSTTLKPESAAKLDDLVAFLNEYPQANVDVIGYTDT---SGPAAYNQKVSEKR 261 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A S L++ G+ RI G + +++ NRR++++V Sbjct: 262 AESVAHALVEKGIDASRIHA-RGEGENNPIASNETREGREQNRRVEVVV 309 >gi|76809785|ref|YP_332623.1| ompA family protein [Burkholderia pseudomallei 1710b] gi|76579238|gb|ABA48713.1| ompA family protein [Burkholderia pseudomallei 1710b] Length = 316 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F P +L + L + ++ S+ G+TD++ A N LS + Sbjct: 204 PSSVTFATDQYAITPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 260 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + GV+ +R+S G + + NRR++I + Q Sbjct: 261 RAQSVVNALAQRGVAANRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 313 >gi|66044564|ref|YP_234405.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] gi|63255271|gb|AAY36367.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] Length = 260 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 83/240 (34%), Gaps = 13/240 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 TK + +L+ +N + ++ + + +D+ K L Sbjct: 21 ATKPNPNLEQARSNFTALQTNPQATQVAALETKDASEWLTKAEQAFRNDEDVQKVDQLSY 80 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N+ ++ A + ++ + + + + T G L Sbjct: 81 LTNQRVELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 ++ D +FD + + P + K+ L + + + G+TD++ A N Sbjct: 139 VTFGD----VLFDYNKAELKPTAQGDIGKLAAFLQENPDRKVIVEGYTDST---GSASYN 191 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 LS RA S L++ GV R+ + G+ + + + NRR+++ + + Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSNSGRAMNRRVEVTISNDN 250 >gi|149195189|ref|ZP_01872279.1| OmpA domain protein [Caminibacter mediatlanticus TB-2] gi|149134622|gb|EDM23108.1| OmpA domain protein [Caminibacter mediatlanticus TB-2] Length = 383 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 7/101 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +S+ PE + ++K E L + + I+G+TD A N LS RA + Sbjct: 281 FDTNSAKIKPEYMPKIEKFAEFLKNHPDVKAEIQGYTDNR---GSATYNMILSEKRAKAV 337 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334 Y+ L+K GV++D+I+ + G+ ++D + NRR+ Sbjct: 338 YEALLKLGVNKDQITFV-GYGEANPIASNDTPEGRAKNRRV 377 >gi|110638110|ref|YP_678319.1| OmpA family peptidoglycan-associated lipoprotein [Cytophaga hutchinsonii ATCC 33406] gi|110280791|gb|ABG58977.1| peptidoglycan-associated lipoprotein, OmpA family [Cytophaga hutchinsonii ATCC 33406] Length = 640 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 8/142 (5%) Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 + ++ + ++ FD + PE++ L K+ ++L H+ Sbjct: 503 NFPKQDGYIELIDTICMNKLKVNTSIILRNVFFDVDKATLRPESVQELDKLVDILRHNPN 562 Query: 265 -VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 I + GHTD+ N LS +RA + L+K G++ +R+ G+ + Sbjct: 563 LKIELSGHTDSD---GNDDHNMVLSDNRAKAVVDYLIKKGGINPNRL-TWKGYGETKPIE 618 Query: 323 ASDPMN--SANRRIDILVEDRQ 342 +D NRR ++ + + Sbjct: 619 LNDTPEHKQQNRRTEVKILSNE 640 >gi|328958204|ref|YP_004375590.1| flagellar motor protein MotB [Carnobacterium sp. 17-4] gi|328674528|gb|AEB30574.1| flagellar motor protein MotB [Carnobacterium sp. 17-4] Length = 249 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 11/140 (7%) Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVI 266 + V G+++S D FD ++ + IG++L I Sbjct: 105 ELNDSVTTSIEERGLVLSFNDAL---FFDSGNAEIKADQQNKFVDIGKLLNQPALKDSFI 161 Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS 324 + G+TD+ P N NW LS+ RA + Q+++ SG++ +R+ + G+ +R K + Sbjct: 162 RVEGYTDSVPVSNPKYKSNWDLSVLRASNVAQIIINDSGINPNRV-SVVGYGEYRPKSDN 220 Query: 325 DPMNSA--NRRIDILVEDRQ 342 NRR+DIL+ + + Sbjct: 221 KTNEGRVENRRVDILILNSE 240 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 ++ ++ P N W + YADF+T+LM FF++M+ ++ D + F+ + Sbjct: 3 RRNKKHEEEPENHERWLLSYADFITLLMIFFIIMYSMSEMDKSKYNELASVFS---MEMG 59 Query: 78 TASKGIFDEQNPPERSSQNKI 98 GI + ++ +K Sbjct: 60 GGGTGILEGESKSGDGENSKG 80 >gi|154147928|ref|YP_001407122.1| outer membrane fibronectin-binding protein [Campylobacter hominis ATCC BAA-381] gi|153803937|gb|ABS50944.1| outer membrane fibronectin-binding protein [Campylobacter hominis ATCC BAA-381] Length = 333 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 10/124 (8%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273 V+ + +I + N F S+ P+ L+K+ ++ E + G+TD Sbjct: 212 VVVDEFGCEKVIRLDLGVN---FAFDSAEISPKYYSELEKVSSIMKEHAEYSVRLEGNTD 268 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSAN 331 + N +LS RA + + L+K GV ++I+ + G +D + N Sbjct: 269 SI---GKEAYNQKLSERRANAVSKALVKLGVPAEKITTV-GLGEKNPVATNDTAEGRAQN 324 Query: 332 RRID 335 RR+D Sbjct: 325 RRVD 328 >gi|224370727|ref|YP_002604891.1| MotB3 [Desulfobacterium autotrophicum HRM2] gi|223693444|gb|ACN16727.1| MotB3 [Desulfobacterium autotrophicum HRM2] Length = 272 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 92/254 (36%), Gaps = 7/254 (2%) Query: 95 QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154 ++ + ++ ++ + + N+ + + + S + Sbjct: 4 ESNGNSGSKNNLNNTPLNGGGREGVSGQGFDPFSENLLFSFETPRRGGWSVSWSDLMMTM 63 Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 L + ++ ++E + P + + K L S + + + Sbjct: 64 FILFVVMYVYQAGSRELEFGPGPGTNLVSDSGSGKIVENSLNASPSDVFTQTRQAVLDEF 123 Query: 215 VLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 V + + I FD + P+ L++IG +L ++ V+++ GHT Sbjct: 124 VDDSASVELVADRAVRISLAGDLFFDLGKADLKPQAQWRLRQIGRILQENSFVVNVIGHT 183 Query: 273 DASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--N 328 D P + NW LS RA + L+K + E+R +SG A + ++ Sbjct: 184 DDMPNHSEQYPTNWELSTARACRVARFLIKEAQLPEERFF-VSGHAWLQPLRPNNTAHNR 242 Query: 329 SANRRIDILVEDRQ 342 S NRR++I++ + Sbjct: 243 SLNRRVEIVLMKER 256 >gi|227540121|ref|ZP_03970170.1| OmpA/MotB:Rickettsia surface antigen [Sphingobacterium spiritivorum ATCC 33300] gi|300771844|ref|ZP_07081715.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861] gi|227239982|gb|EEI89997.1| OmpA/MotB:Rickettsia surface antigen [Sphingobacterium spiritivorum ATCC 33300] gi|300761230|gb|EFK58055.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 173 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 7/113 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F +SS ++ L K+ ++L + I + GHTDA+ N LS R Sbjct: 65 SDFLFPTNSSYLTDKSKGELSKLAKLLKDNSKTKIRVDGHTDAT---GTPEYNLWLSDKR 121 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 A S + L+ SG+SE RI+ G + + NRR+++++ +++ Sbjct: 122 AVSVKKFLVDSGISESRITT-KGIGQAKPVADNKTPEGRQMNRRVEVVLLNQK 173 >gi|325269589|ref|ZP_08136204.1| OmpA family protein [Prevotella multiformis DSM 16608] gi|324988067|gb|EGC20035.1| OmpA family protein [Prevotella multiformis DSM 16608] Length = 289 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 85/238 (35%), Gaps = 14/238 (5%) Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 ++ + Q + NN S Q + S + ++ + + Sbjct: 38 QLSADYQSAKETIAANNARIKSLEDQLAQARESAAALQGSLDNSLRNANSNNINISKLVD 97 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + ++ ++ K + L +++ L+ ++ +K V + + + IS+ D Sbjct: 98 QINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSREELKEVDVQVLKGVVYISLADNM- 156 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------RDNWR 286 ++ S L KI +++ + I G+TD P R+NW Sbjct: 157 --LYKSGSYEVNDRAEQTLSKIAKIITDYKDYDVLIEGNTDNVPINTANDKMKNIRNNWD 214 Query: 287 LSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS RA S Q L GV+ R++ G + +D NRR I++ + Sbjct: 215 LSCLRAASVVQYLQDRFGVNPKRLTAG-GRGEYNPLATNDTELGKQRNRRTQIIITPK 271 >gi|330814655|ref|YP_004362830.1| type VI secretion system OmpA/MotB family protein [Burkholderia gladioli BSR3] gi|327374647|gb|AEA65998.1| type VI secretion system OmpA/MotB family protein [Burkholderia gladioli BSR3] Length = 420 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 7/136 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + ++ R MF ++ KI + Sbjct: 287 LKDEIAAGTVSVDEDARHSAVTF---RGDAMFPPGGVTIKSAMAPLVAKIAGEIVKVPGK 343 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +S+ G+TD P R+ N LS +RA Q+L +GV +R+ + G + Sbjct: 344 VSVLGYTDNLPIRSRQFPSNEALSEERATQVLQMLQAAGVPANRLEAV-GKGDADPIGDN 402 Query: 325 DPM--NSANRRIDILV 338 + NRR++I+V Sbjct: 403 RTAQGRAQNRRVEIVV 418 >gi|292489492|ref|YP_003532380.1| putative type VI secretion system core protein [Erwinia amylovora CFBP1430] gi|292898296|ref|YP_003537665.1| outer membrane protein [Erwinia amylovora ATCC 49946] gi|291198144|emb|CBJ45249.1| putative outer membrane protein [Erwinia amylovora ATCC 49946] gi|291554927|emb|CBA22885.1| putative type VI secretion system, core protein [Erwinia amylovora CFBP1430] gi|312173666|emb|CBX81920.1| putative type VI secretion system, core protein [Erwinia amylovora ATCC BAA-2158] Length = 413 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 4/120 (3%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNW 285 S++ + +F +S+ VL ++ + + I + G++D P R+ N+ Sbjct: 282 SVVTLKGDGLFTSASTEVRGRYAEVLDRVAAAMNSVSGRILVVGYSDNVPIRSARFASNY 341 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 LSL RA S + L + R+ G ++ + NRR++I + G Sbjct: 342 ELSLARAQSVSEQLQQHLTQPQRVKA-EGRGESNPLAPNNSAGNRARNRRVEITLLVSPG 400 >gi|288925232|ref|ZP_06419167.1| OmpA family protein [Prevotella buccae D17] gi|288337997|gb|EFC76348.1| OmpA family protein [Prevotella buccae D17] Length = 284 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 Q + Q N S Q K E + + + + + Sbjct: 42 QDAKEQLAAANARVASLEDQLAQQKRDYASLQEMLDKSLVNANSNNINISKLVDQINESN 101 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + ++ K + L +++ L+ ++ +K V + + + IS+ D ++ Sbjct: 102 QYIRHLVEVKSKSDSLNMVLTNNLTRSLSKEELKEVDVQVLKGVVYISLADNM---LYKS 158 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA------RDNWRLSLDRA 292 S L KI +++ + + I G+TD P + R+NW LS RA Sbjct: 159 GSYEINDRAEETLSKIAKIIMDYKDYEVLIEGNTDNVPVNTDSPKMKNIRNNWDLSALRA 218 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 S Q L + GV R++ G + + NRR I++ + Sbjct: 219 SSVVQYLQNRYGVDPKRLTAG-GRGEYNPVATNSTELGKQRNRRTQIIITPK 269 >gi|317049660|ref|YP_004117308.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b] gi|316951277|gb|ADU70752.1| OmpA/MotB domain protein [Pantoea sp. At-9b] Length = 528 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 6/115 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNW 285 +I + +FD + P + +L K + + + GHTD + N Sbjct: 389 TIAQLDSLALFDSGKAELKPGSTKMLIKALVGIRAKPGWLIVISGHTDNT---GDPAFNQ 445 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +LSL RA + + +G + + G+ R + +D NRR+DI + Sbjct: 446 QLSLQRAEAVRNWMRDTGAIAESCFAVQGYGVSRPLVTNDTPEGRATNRRVDIRL 500 >gi|312889185|ref|ZP_07748742.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] gi|311298347|gb|EFQ75459.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] Length = 286 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 9/154 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 L +++ L+ ++ + K V + + + IS+ D ++ S + L Sbjct: 121 DSLNMVLTNNLTRSLSADESKDVNVKVLKGVVYISLSDNM---LYKSGSYEISEKAGATL 177 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-GVSEDRI 309 KI +++ I G+TD P R+NW LS RA S Q L + GV R+ Sbjct: 178 AKIAKIITDYKGYDVLIEGNTDNLPISKPNIRNNWDLSALRASSVVQSLQNNYGVEPKRL 237 Query: 310 SKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 + G + + + + NRR I++ + Sbjct: 238 TAG-GRGEYNPVADNSTESGKAQNRRTQIIITPK 270 >gi|264677568|ref|YP_003277474.1| OmpA/MotB [Comamonas testosteroni CNB-2] gi|262208080|gb|ACY32178.1| OmpA/MotB [Comamonas testosteroni CNB-2] Length = 214 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ P L + + + I GHTD+ N +LS+ RA Sbjct: 104 DAFFDFDKSVLKPAGKAKLDDLTGKIKDINLEVIIAVGHTDSI---GSDAYNQKLSVRRA 160 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + L+ G+ + R+ G + + + NRR++I V + Sbjct: 161 EAVKAYLVSKGIEKSRVYT-EGKGKKQPVADNKTAAGRAQNRRVEIEVVGTK 211 >gi|311109539|ref|YP_003982392.1| type VI secretion system OmpA/MotB family protein [Achromobacter xylosoxidans A8] gi|310764228|gb|ADP19677.1| type VI secretion system OmpA/MotB family protein [Achromobacter xylosoxidans A8] Length = 425 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 7/178 (3%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + + + ++K + ++ L + + V Sbjct: 240 WRLGSQSDAVFASIAKLRPPTVQIAPTAVKRPAPAPRLAVFLAPEIRDQLVSVRDEVDRS 299 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-D 283 ++ + R +F+ +S + + VL ++ + L + I +RG++D +P R+ Sbjct: 300 VVVL---RGDGVFESGASSVRDQYLPVLSRVADALRETQGSILVRGYSDNTPMRSARFPS 356 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 NW LS RA + +L + R+ + G +D NRR++I V Sbjct: 357 NWHLSQARADAVKDMLEQRLGQTARV-RAEGRGDADPVAPNDTAAGRALNRRVEITVL 413 >gi|262065804|ref|ZP_06025416.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693] gi|291380509|gb|EFE88027.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693] Length = 171 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 5/154 (3%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L L + + +K + ++I+ FD S+ P+ Sbjct: 21 PTLAALTTTQMRENTIRINALEIKNIDITNIEAPKEMTIVLDERALNFDFDKSVVKPQYF 80 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L + + + + +++ GHTD+ + N LS RA + L++ G++E+RI Sbjct: 81 EMLNNLKDFIEQNNYEVTLEGHTDSI---GSNQYNIGLSRRRAEAVKAKLIEFGLAEERI 137 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 I ++ NRR++ + R Sbjct: 138 VGIEAKGEEYPVATNETPEGRLQNRRVEFRLVQR 171 >gi|108759406|ref|YP_634375.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622] gi|108463286|gb|ABF88471.1| OmpA domain protein [Myxococcus xanthus DK 1622] Length = 538 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 + F S L I + L + V I GHTD + N LS D Sbjct: 428 EHHVQFPVGQSTLSDSERRNLDAIADYLKANPGVSLRIEGHTDNT---GPEELNRTLSQD 484 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 RA + Q L++ G+ R++ G+ + ++D NRR++ + Sbjct: 485 RADAVRQYLIQQGIESSRLTA-KGYGPAQPIASNDTPEGRSANRRVEFV 532 >gi|284039059|ref|YP_003388989.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283818352|gb|ADB40190.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 427 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 85/275 (30%), Gaps = 13/275 (4%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 FN +G +++ K + ++ PP + Q + L +T Q + L Sbjct: 158 FNFWGVHIINPRKDSYSQRKPPVQPRQQPPRTVPRPQPEPPTEQLPPDNTPVPVQPKVLP 217 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 N + + + + + + + Sbjct: 218 APATVAINGITRDAKTKQPITATVTYRLISGAEASGDEPADSLQSGSLTGKYRIEIDRRG 277 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLP 246 + AK S LV + V + I + F+ S P Sbjct: 278 VYAVTASAKGYFSQSDTLVTN----RVDVARDFNLVPIEAGAKITLKNIYFNVSKYDLKP 333 Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 E+ L ++ V+ + + + GHTD N LS +R + L+ G+S Sbjct: 334 ESYPELDRLVTVMRSNPTMQIRLEGHTDTV---GEFDANVELSRNRVNEVKRYLVDKGIS 390 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RI + G+ R + NRR+++++ Sbjct: 391 ASRIETV-GYGPSRPINTNKSLKERPENRRVEMVI 424 >gi|224540643|ref|ZP_03681182.1| hypothetical protein BACCELL_05557 [Bacteroides cellulosilyticus DSM 14838] gi|224517715|gb|EEF86820.1| hypothetical protein BACCELL_05557 [Bacteroides cellulosilyticus DSM 14838] Length = 299 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 9/164 (5%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + K + L +++ L+ ++ +K V + + + IS+ D ++ S Sbjct: 119 KQLVDAKSKSDSLNVMLTNNLTRSLSREELKEVDVKVLKGVVYISLADNM---LYKSGSY 175 Query: 243 IPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLM 300 L KI +++ + + + G+TD P R R+NW LS RA S Q L Sbjct: 176 EINERAGETLSKIAKIITDYKDYEVLVEGNTDNVPISRTNIRNNWDLSALRASSVVQELQ 235 Query: 301 -KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 K GV R+S G + +D NRR I+V R Sbjct: 236 NKYGVDPKRLSAA-GRGEYNPITDNDSELGKQRNRRTQIIVTPR 278 >gi|317064862|ref|ZP_07929347.1| outer membrane protein [Fusobacterium ulcerans ATCC 49185] gi|313690538|gb|EFS27373.1| outer membrane protein [Fusobacterium ulcerans ATCC 49185] Length = 211 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 50/143 (34%), Gaps = 10/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L V + +++ F SS + L I VL Sbjct: 72 DRQEQELRERLKNTEVQVSQNGDNLNLNL---PGGVTFATDSSNIVSSFYGPLNSIATVL 128 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E I + G+TD A N LS RA S L++ GVS RIS + G+ Sbjct: 129 VQYPETRIIVNGYTDNV---GSASYNVSLSERRAASVRNYLIQQGVSARRISYV-GYGME 184 Query: 319 RLKIASDPM--NSANRRIDILVE 339 + + + NRR+++ + Sbjct: 185 NPRATNSTAAGRAENRRVELEIL 207 >gi|315122279|ref|YP_004062768.1| flagellar motor protein MotB [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495681|gb|ADR52280.1| flagellar motor protein MotB [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 126 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 69/114 (60%), Positives = 84/114 (73%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 MN D +Q+ +QFI IKKKV +D LGSWKIVYADFMT LM+FFLVMWI+NATDD+ Sbjct: 1 MNYQKDNDQKKNQFIFIKKKVVVDLEKKKLGSWKIVYADFMTALMSFFLVMWIVNATDDN 60 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 TKK IE YFNPFG NL+ ASKGIF++ N P +N I+ ID+ T N+ +LK Sbjct: 61 TKKVIENYFNPFGPNLLMASKGIFEKNNSPNNFPKNSINQPIDKKTTNNNFNLK 114 >gi|312962530|ref|ZP_07777021.1| OmpA/MotB [Pseudomonas fluorescens WH6] gi|311283457|gb|EFQ62047.1| OmpA/MotB [Pseudomonas fluorescens WH6] Length = 271 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 94/251 (37%), Gaps = 21/251 (8%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + + + + Q + + N+ ++ ++ D + + Sbjct: 23 ASHPNGEQALQQAGSDFQKVKEDANVLRIAPKDVIRAGESLARADRLSSYWGSGADVVHY 82 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA----------DNIVKGV 215 + + + E+ L +R +L+ +++ L + + + Sbjct: 83 AYLSQRYSAIAREHTEQALNEERAAKLELERQRLQLALRESKLISVQQQGKWLEEQIASL 142 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDA 274 T G+++++ D +FD + + KI + L + V+ I G+ D Sbjct: 143 TTTQTDRGLVMTLGD----VLFDTGEAELKNSANRTVLKIVQFLQLNPKRVVRIEGYADN 198 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 + ++N +LS DRA S VL+ G+ E RI ++ G+ A+ + NR Sbjct: 199 T---GGQQENLKLSRDRAQSVADVLVDLGIDEKRI-QVEGYGDQYPVEANASERGRAQNR 254 Query: 333 RIDILVEDRQG 343 R++I+ D +G Sbjct: 255 RVEIVFSDEKG 265 >gi|163802616|ref|ZP_02196508.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp. AND4] gi|159173699|gb|EDP58518.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp. AND4] Length = 315 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 T F +S+ PE+ L + L + + + G+TD A N ++S Sbjct: 201 MGTGSFALNSTTLKPESASKLDDLVAFLNEYPQATVGVIGYTDT---SGPAAYNQKVSEK 257 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S L++ G+ RI G + +++ NRR++++V Sbjct: 258 RAESVANALVEKGIDASRIQA-RGEGENNPIASNETREGREQNRRVEVVV 306 >gi|317059511|ref|ZP_07923996.1| outer membrane protein [Fusobacterium sp. 3_1_5R] gi|313685187|gb|EFS22022.1| outer membrane protein [Fusobacterium sp. 3_1_5R] Length = 204 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 10/145 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A V + I + + F S+ L I +VL Sbjct: 65 DQQEAALRASLKNTAVQVQRDGENISLYL---PGGVTFASDSAQISGNFYSALNSIAQVL 121 Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E ++GHTD++ + N LS RA S L+ GV+ +R+ GF + Sbjct: 122 VQYPETQILVQGHTDST---GSFQHNMDLSNRRANSVKHYLIGQGVASNRLMS-QGFGPN 177 Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341 + + NRR++I + + Sbjct: 178 NPVADNSTPDGRQMNRRVEIKIAPK 202 >gi|312892040|ref|ZP_07751540.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] gi|311295412|gb|EFQ72581.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] Length = 460 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 7/129 (5%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 + V T + + D FD + ++ L K+ E+L + + + GH Sbjct: 336 AENVKVYITEEDKRV-VKDAIANLEFDLGKATIRAHSLPSLDKVAELLVNKNFSLKLAGH 394 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 TD A N RLS +RA + L+ G + RI +G+ ++ ++ Sbjct: 395 TDN---SGSAALNMRLSKERAEAIKTYLVSKGANASRIEA-TGYGMNQPIASNKTAAGRQ 450 Query: 331 -NRRIDILV 338 NRR++ + Sbjct: 451 QNRRVEFTL 459 >gi|237800117|ref|ZP_04588578.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022973|gb|EGI03030.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 260 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 83/240 (34%), Gaps = 13/240 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 TK + +L+ +N E ++ + + + +D K L Sbjct: 21 ATKPNPNLEQARSNFTALQTNPEATKVAALETKDASEWLDKADKAFRDSEDAQKVDQLAY 80 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N+ ++ A + ++ + + + + T G L Sbjct: 81 LTNQRVELAKQTIALRTSEAALQNASADRAKARLDA--RDAQIAALKNSLNAKQTERGTL 138 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 ++ D +FD + + P + K+ L + + + G+TD++ A N Sbjct: 139 VTFGD----VLFDYNKADLKPTAQGDIGKLASFLQENPDRKVIVEGYTDST---GSASYN 191 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 LS RA S L++ GV R+ + G+ + + + NRR+++ + + Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSNSGRAMNRRVEVTISNDN 250 >gi|229592075|ref|YP_002874194.1| hypothetical protein PFLU4673 [Pseudomonas fluorescens SBW25] gi|229363941|emb|CAY51462.1| putative outer membrane protein [Pseudomonas fluorescens SBW25] Length = 271 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 90/247 (36%), Gaps = 13/247 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + + + + Q + + N+ ++ ++ D + + Sbjct: 23 ASHPNGEQALQQAGSDFQKVKEDANVLRIAPKDVIRAGESLARADRLSSYWGSGADVVHY 82 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV-ADNIVKGVLFETTRTGI 224 + + + E+ L +R +L+ +++ L +G E + Sbjct: 83 AYLSQRYSAIAREHTEQALNEERGAKLELERQRLQLALRESKLISVQQQGKWLEEQIASL 142 Query: 225 LISIIDQ-----RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278 + D+ +FD + + KI + L + V+ I G+ D + Sbjct: 143 ATTQTDRGLVMTLGDVLFDTGEAELKNSANRTVLKIVQFLQLNPKRVVRIEGYADNT--- 199 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 R+N +LS DRA S VL+ G+ E RI ++ G+ A+ + NRR++I Sbjct: 200 GGERENLKLSRDRAQSVADVLVDLGIDEKRI-QVEGYGDQYPVEANASERGRAQNRRVEI 258 Query: 337 LVEDRQG 343 + D +G Sbjct: 259 VFSDAKG 265 >gi|78221563|ref|YP_383310.1| thrombospondin type 3 repeat-containing OmpA/MotB protein [Geobacter metallireducens GS-15] gi|78192818|gb|ABB30585.1| Thrombospondin type 3 repeat:OmpA/MotB [Geobacter metallireducens GS-15] Length = 447 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 8/102 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + PE ++++ + L + ++ GHTD+ + + N +LS RA + Sbjct: 338 FDFDKANIKPEFRDEIKRVADFLKEYPDATAVIEGHTDS---KGTVKYNQKLSERRAKAV 394 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 + L+ G+S R+S G+ + + NRR+ Sbjct: 395 MKNLVDEFGISAKRLSA-KGYGETKPVADNATEEGRQKNRRV 435 >gi|163942243|ref|YP_001647127.1| flagellar motor protein MotB [Bacillus weihenstephanensis KBAB4] gi|163864440|gb|ABY45499.1| OmpA/MotB domain protein [Bacillus weihenstephanensis KBAB4] Length = 261 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 85/207 (41%), Gaps = 9/207 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +Q S K+ ++ + K+ A +K+ + +L Sbjct: 52 KQMAVAFRSELAGGTGNKEFLSDQKPKEEKELSASSLESEKIKKDAEAEVKKQEMNELKA 111 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + T G++++I++ +FD + E++ + +++ Sbjct: 112 VQKGIDKYIEEKQLSSSFKTDLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSN 168 Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314 +L + S I++ GHTD P N NW LS RA + QVL+++ + ++ S + G Sbjct: 169 LLVSASPREITVSGHTDNVPISNAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAV-G 227 Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339 + +R +D + NRR+++ + Sbjct: 228 YGEYRSIAPNDTPEGKAKNRRVEVFIL 254 >gi|218673547|ref|ZP_03523216.1| outer membrane lipoprotein [Rhizobium etli GR56] Length = 180 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A G+ I++++ FD P L + Sbjct: 37 NYMDQQEAELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVA 93 Query: 257 EVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + +I + GHTD++ + N LS RA S L G+ + R+S + GF Sbjct: 94 IVLRKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GF 149 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 + ++ + NRR++I + Sbjct: 150 GPSQPVASNASEAGRAQNRRVEIQI 174 >gi|161520469|ref|YP_001583896.1| hypothetical protein Bmul_3921 [Burkholderia multivorans ATCC 17616] gi|160344519|gb|ABX17604.1| type VI secretion system OmpA/MotB family protein [Burkholderia multivorans ATCC 17616] Length = 431 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 7/134 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + +++ R MF + ++ KI +A Sbjct: 298 LKDEIAAGTVSVDEDARRSVVTF---RGDAMFRPGGASVQASMNPLIAKIAAEIAKVPGK 354 Query: 266 ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 ++I G+TD P R N LS +RA Q+L +GV +R+ + G + Sbjct: 355 VTIVGYTDNVPIRSGQFASNQALSEERATQVMQMLQAAGVPANRLEAV-GKGDADPVGDN 413 Query: 325 DPM--NSANRRIDI 336 + NRR++I Sbjct: 414 RTAQGRAQNRRVEI 427 >gi|88802157|ref|ZP_01117685.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P] gi|88782815|gb|EAR13992.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P] Length = 278 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 14/211 (6%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 E L D + ++ + + + + EK + + I+ Sbjct: 59 EERVKYLQDDKKNALKQVENLTVLTQSSSDNIKTVIAQLSEKDKYINGVREAMTQKDSIN 118 Query: 201 STLSGLVADNIVK-----GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + N+ + + +T + ISI D+ +F S VVL+KI Sbjct: 119 LAIKYHLTKNLTEGIQDKDIEVNVEKTVVFISISDKL---LFKSGSYNVTDGAYVVLEKI 175 Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKI 312 +V+ E+ + I GHTD+SP + +DNW LS RA + ++L K GV +R+ Sbjct: 176 AKVINDQPEMEVMIEGHTDSSPIKREIIQDNWDLSALRATAITRILQYKFGVQPNRLIAA 235 Query: 313 SGFAHHRLKIASDPMN--SANRRIDILVEDR 341 + + + +D S NRR I++ R Sbjct: 236 A-RSQYVPLAPNDTAENKSKNRRTKIIIMPR 265 >gi|116688507|ref|YP_834130.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia HI2424] gi|116646596|gb|ABK07237.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424] Length = 316 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 88/286 (30%), Gaps = 17/286 (5%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS-VDLKIGSTNQKKQY 124 + G + G P+ + H T + +T + Sbjct: 33 AAFAQNTGATVTPVGNGTVATTALPQANPNAGGASGTVVHGTAGTIAPPPANATPGQVVV 92 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + + Q T ++ + +T S N ++ K Sbjct: 93 GGKVPDEATKAAVLQKLRDTYGATNVVDQVEVGDVATPPNWSANVQKLLGAQLKQISKGQ 152 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTP 235 +++ + + +A ++ + T + G+ +S +Q T Sbjct: 153 LKINGTQIEMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTI 212 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ S+ P+ ++L ++ LA I GHTD N LS RA + Sbjct: 213 EFETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDN---SGNRTSNIALSQARADA 269 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 L+ + +++ +G + +D + NRRI+ V Sbjct: 270 VKGYLITKSIPPQQMTT-TGVGPDQPIAPNDMADGRARNRRIEFRV 314 >gi|319791244|ref|YP_004152884.1| type IV / vi secretion system protein, dotu family [Variovorax paradoxus EPS] gi|315593707|gb|ADU34773.1| type IV / VI secretion system protein, DotU family [Variovorax paradoxus EPS] Length = 454 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 5/116 (4%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNW 285 S++ R F S+ P+ ++ VL++IG+ LA + I GH+D P R+ NW Sbjct: 316 SVVRLRGDSFFGSGSAEPMAASLPVLRRIGQALAEVKGDVLITGHSDNQPIRSLRYPSNW 375 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 LS RA + L V R+ G A A+D + NRR+DI++ Sbjct: 376 HLSAARADAVKGALTTL-VDPARMRS-DGKADAEPVAANDTPANRARNRRVDIVLL 429 >gi|74055057|gb|AAZ95862.1| PomB [Aeromonas hydrophila] Length = 303 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 7/180 (3%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 ++ + + E+ LP S I + K+ LAK + + V Sbjct: 80 EVSAAPSVLESALLPSPSLAPISGVPIKQDGMTLAKIDTQLKESMGTLVDAGVVKLTLDD 139 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI- 280 + + + + +F S+ VL + ++L + +RG+TD N Sbjct: 140 NWLTVEL---SSGLLFGSGSAFMSTNADPVLNTLSDILKPVDNYVRVRGYTDNQQINNEI 196 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 R NW LS RA + VL+ G++ R+ + +D NR++ + + Sbjct: 197 FRSNWTLSAARAEAVLTVLIAKGIAPQRL-AYEAYGEFSPFAGNDSEQGRLQNRKVVVAI 255 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 49/143 (34%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + K+ +L W + YAD+MT++ A F+V++ + + D +A+ Sbjct: 1 MRKRYRLHLQGREHLDRWLVSYADYMTLIFALFVVLYSVALVNKDKYRAVIDGMTQAFNV 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + S G+ + Q +++ S+ E S L S KQ I Sbjct: 61 MQPRSDGLLEGQGKSLLNNEVSAAPSVLESALLPSPSLAPISGVPIKQDGMTLAKIDTQL 120 Query: 136 NSQQSEHCKNSLTRDSEKGKDLC 158 + + + L Sbjct: 121 KESMGTLVDAGVVKLTLDDNWLT 143 >gi|226944423|ref|YP_002799496.1| major outer membrane porin OprF [Azotobacter vinelandii DJ] gi|226719350|gb|ACO78521.1| major outer membrane porin OprF [Azotobacter vinelandii DJ] Length = 351 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 8/129 (6%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + ++ FD + E+ ++ + + + + ++ GHTD+ Sbjct: 224 TVNAEGCTAVAEVVRVELDVKFDFDKAQVKEESYADIKNLADFMKQYPQTNTTVEGHTDS 283 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSAN 331 N +LS RA + VL+ + GV R+ + G+ R + + N Sbjct: 284 V---GTDAYNQKLSERRANAVRDVLVNEYGVQGSRVDSV-GYGESRPVADNATESGRAIN 339 Query: 332 RRIDILVED 340 RR++ VE Sbjct: 340 RRVEAEVEA 348 >gi|302035652|ref|YP_003795974.1| putative OmpA/MotB family outer membrane protein [Candidatus Nitrospira defluvii] gi|300603716|emb|CBK40047.1| putative Outer membrane protein, OmpA/MotB family [Candidatus Nitrospira defluvii] Length = 400 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 97/291 (33%), Gaps = 14/291 (4%) Query: 55 NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 D ++ + + Q + + D + + Sbjct: 115 GQLSDAERQLSAKDQELAALRSGVGDRDRLAAQLAALQGQLSSKDQELAGLKGNAGDRDR 174 Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 + S + + + + +NS + KN+ + DL + + E Sbjct: 175 LSSELAQAKQRITQLEQQLEANSHELAGLKNAAGDREKLVADLAAARQRASDLENEIGRR 234 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 ++ K ++K L + +S L VA V T + T Sbjct: 235 DQEMTALKGALDQQKTSLAEAKDDLSKLLQAEVAKGNVTMKQLGDQLT------LGLATT 288 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI----ARDNWRLSL 289 +FD + P VL +IG VL + I + GHTD P + N LS Sbjct: 289 LLFDSGEATLKPGGADVLHRIGGVLKQYPDRSIHVAGHTDNVPIKGRLAKTYPTNVELSQ 348 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA SA Q L + G++ D+I G A R ++ NRR++I+V Sbjct: 349 ARAESARQALTEGGMAPDKIEA-KGHADSRPMASNSTAEGRQKNRRVEIVV 398 >gi|88706015|ref|ZP_01103723.1| chemotaxis MotB protein [Congregibacter litoralis KT71] gi|88699729|gb|EAQ96840.1| chemotaxis MotB protein [Congregibacter litoralis KT71] Length = 216 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 28/172 (16%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR---- 232 L+K+ LA +++ Q + + L+G +A I+I D R Sbjct: 43 ELAKDLELAEAEREQAQARRQVLEEALAGPLASG--------------RITINDGRIGIS 88 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGE----VLAHSTEVISIRGHTDASPFRN---IARDNW 285 + +F +S E +L + + L + +++ I G TD P + +DNW Sbjct: 89 GSVLFALNSDRLQDEGRELLATLADPLNVFLKENDQLLMISGFTDDLPIQAGNLSFKDNW 148 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335 LS RA + + L+ +G+ DR+ + F + + + + NRR++ Sbjct: 149 ELSAQRALTVTRELVAAGLPADRVFAAA-FGDQQPVAPNRDESGRALNRRVE 199 >gi|115350445|ref|YP_772284.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD] gi|115280433|gb|ABI85950.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 316 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 80/256 (31%), Gaps = 18/256 (7%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR---- 149 + I + G + L + + N + + Sbjct: 66 GSGTVVHGTAGTIAPPPANATPGQVVAGGKVPDEATKAAVLQKLRDTYGAANVVDQIEVG 125 Query: 150 ----DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 ++ K + + + E + + + Q LA +++TL+ Sbjct: 126 DVATPPNWSANVQKLLGAQLKQISKGQLKINGTQIEVKGEVHNEAQRQQLASDMANTLNP 185 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 I G+ + G+L + R F+ S+ P+ +L ++ L+ Sbjct: 186 TYT--IKNGLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRQILDQMAAALSKLQNR 242 Query: 266 I-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I GHTD N LS RA + L+ + +++ +G + + Sbjct: 243 TVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQPIAPN 298 Query: 325 DPM--NSANRRIDILV 338 D + NRRI+ V Sbjct: 299 DTADGRARNRRIEFRV 314 >gi|300770792|ref|ZP_07080670.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861] gi|300762349|gb|EFK59167.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 438 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 68/214 (31%), Gaps = 14/214 (6%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 S S + + K + E + L + + Sbjct: 228 SKPALSNSNPVATLVNDYTAKYDQLKAEREALVAANNALKSQVDQLNADLKDDDGDGVAN 287 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSSIPLP 246 K +T SG D + T+ I + ++ + FD S Sbjct: 288 KYDKCPNTPSGTKVDGAGCPLPVAETKVVEKIVVTEEDRKVVDEAIKNLEFDLGKSTIRS 347 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + L ++ +L + + GHTD + + N RLS +RA + L G + Sbjct: 348 TSYPSLDRVASLLIEKNFSLKLAGHTDNT---GSMKTNLRLSKERAEAVKAYLSGKGANP 404 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RI +G+ ++ ++ NRR++ + Sbjct: 405 SRIEA-TGYGPNQPIASNATAEGRQQNRRVEFTL 437 >gi|294638308|ref|ZP_06716561.1| OmpA family protein [Edwardsiella tarda ATCC 23685] gi|291088561|gb|EFE21122.1| OmpA family protein [Edwardsiella tarda ATCC 23685] Length = 219 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD +SS P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDSNSSNLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV+ RI I G Sbjct: 137 VLKEYQKTAVNVVGYTDST---GSRDLNMRLSQQRADSVASALITQGVAAGRIRTI-GMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAAGKAQNRRVEITL 216 >gi|27378711|ref|NP_770240.1| hypothetical protein blr3600 [Bradyrhizobium japonicum USDA 110] gi|27351860|dbj|BAC48865.1| blr3600 [Bradyrhizobium japonicum USDA 110] Length = 508 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 7/152 (4%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 D ++ + L +N + + T + I+I + D +F + L + Sbjct: 361 DRITQLQRIRNALAKENTACAMTADQTPSFIVIRVCD---LALFASGQATILDGFKPIAL 417 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 ++ L I + GHTD+SP R N+ LS++RA + L R+ + Sbjct: 418 RVAATLDKEPGRIRVVGHTDSSPIRTVRFPTNFELSVERAKAVAAALKPGLTDGSRVD-V 476 Query: 313 SGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G ++ + NRR++I +E + Sbjct: 477 EGKGADAPIASNTTPEGRAKNRRVEIFIERSE 508 >gi|323495404|ref|ZP_08100481.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546] gi|323310327|gb|EGA63514.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546] Length = 324 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T F+ +S+ PE+ L ++ E L + + + G+TD+ A N +S R Sbjct: 211 GTGSFELNSTQLKPESASQLDELVEFLNTYPQAKVEVIGYTDS---SGAAEYNQVVSEKR 267 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A S L + G+ RI+ G + ++D NRR++++V Sbjct: 268 AESVASTLEQKGIDASRITA-RGEGENNPVASNDTREGRQQNRRVEVIV 315 >gi|257466649|ref|ZP_05630960.1| Outer membrane protein [Fusobacterium gonidiaformans ATCC 25563] Length = 217 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 10/145 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A V + I + + F S+ L I +VL Sbjct: 78 DQQEAALRASLKNTAVQVQRDGENISLYL---PGGVTFASDSAQISGNFYSALNSIAQVL 134 Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E ++GHTD + + N LS RA S Q L+ GV+ +R+ GF + Sbjct: 135 VQYPETQILVQGHTDNT---GSFQHNMDLSNRRANSVKQYLIGQGVASNRLMS-QGFGPN 190 Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341 + + NRR++I + + Sbjct: 191 NPVADNSTPDGRQMNRRVEIKIAPK 215 >gi|189353340|ref|YP_001948967.1| hypothetical protein BMULJ_04580 [Burkholderia multivorans ATCC 17616] gi|189337362|dbj|BAG46431.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616] Length = 432 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 7/134 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + +++ R MF + ++ KI +A Sbjct: 299 LKDEIAAGTVSVDEDARRSVVTF---RGDAMFRPGGASVQASMNPLIAKIAAEIAKVPGK 355 Query: 266 ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 ++I G+TD P R N LS +RA Q+L +GV +R+ + G + Sbjct: 356 VTIVGYTDNVPIRSGQFASNQALSEERATQVMQMLQAAGVPANRLEAV-GKGDADPVGDN 414 Query: 325 DPM--NSANRRIDI 336 + NRR++I Sbjct: 415 RTAQGRAQNRRVEI 428 >gi|256028784|ref|ZP_05442618.1| Outer membrane protein [Fusobacterium sp. D11] Length = 191 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 5/154 (3%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +Q L S + +K + + ++I+ + FD SI + Sbjct: 26 AVQALTTTQMRENSIRINALELKDIDILNSEAPKEMTIVLDERSLNFDFDKSIVKAQYFD 85 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L+ I E + + I+I GHTD+ + N+ LS RA + L++ G++EDRI Sbjct: 86 LLKNIKEFVEQNNYEITIVGHTDSI---GSNQYNFGLSRRRAEAVKAKLLEFGLAEDRIV 142 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 I + + + NRR++ + R+ Sbjct: 143 GIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 176 >gi|146281895|ref|YP_001172048.1| outer membrane protein [Pseudomonas stutzeri A1501] gi|145570100|gb|ABP79206.1| outer membrane protein [Pseudomonas stutzeri A1501] Length = 212 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + ++ +Q + + + + ++ GHTD+ N RLS RA + Sbjct: 107 FDFDRDVVKQDSYSDIQNLADFMKEYRQTTTVLEGHTDSV---GTDAYNQRLSERRANAV 163 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +VL+ GV +R++ + G+ R + NRR++ VE R Sbjct: 164 RRVLVDELGVEGNRVNAV-GYGESRPVADNSTEEGRAINRRVEAEVEARP 212 >gi|154685777|ref|YP_001420938.1| flagellar motor protein MotB [Bacillus amyloliquefaciens FZB42] gi|154351628|gb|ABS73707.1| MotB [Bacillus amyloliquefaciens FZB42] Length = 261 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 80/199 (40%), Gaps = 7/199 (3%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 T + + + + ++ KE+ + ++L + Sbjct: 59 TGGTGVLEYSSVTPPENEKDGVDQLKKDKEKDKEQKKKEREAADREELEGVQKQVNQFIK 118 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVI 266 + + + T+ G+LI+I D FD + E I + ++I +L + I Sbjct: 119 NKKLETQLETKLTKEGLLITIKDS---IFFDSGRADIRQEDIPLAKEISNLLVLNPPRNI 175 Query: 267 SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 I GHTD P +N NW LS+ RA + +L ++ + ++ GF ++ +++ Sbjct: 176 IISGHTDNVPIKNSQYQSNWHLSVMRAVNFMAILTENPKLDAKVFSAKGFGEYKPAVSNK 235 Query: 326 PMNSA--NRRIDILVEDRQ 342 NRR+++L++ R Sbjct: 236 TAEGRSKNRRVEVLIQPRN 254 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +KK D + SW I YAD +T+L+A F+V++ +++ D + + + FN Sbjct: 1 MARKKKKKHDDEHVDESWLIPYADLLTLLLALFIVLFAMSSVDAAKFQMLSKSFNAVF-- 58 Query: 76 LMTASKGIFDEQNPPERSSQNKI 98 T G+ + + ++ Sbjct: 59 --TGGTGVLEYSSVTPPENEKDG 79 >gi|115375599|ref|ZP_01462856.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1] gi|310823174|ref|YP_003955532.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115367375|gb|EAU66353.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1] gi|309396246|gb|ADO73705.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1] Length = 468 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 75/265 (28%), Gaps = 15/265 (5%) Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 G DE PE + + + + L+ + N+ + Sbjct: 213 DGFQDEDGCPELDNDSDGIVDSADKCPNELGPLQNLGCPIVDKDGDGINDPQDKCPDEPE 272 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + D D + R + L Sbjct: 273 DKDGFQ-DEDGCPDLDNDADGVPDGQDKCPLEAGPAENGGCPDSDKDRDGIVDRLDACPE 331 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP-LPETIVVLQKIGEVL 259 K + + I I + F S+ +++ +L+ I VL Sbjct: 332 EPGVPEEKGCAKKYKMVVVKKDRIEI-----KKQINFGTGSAKIVGAQSLAILKDIALVL 386 Query: 260 AHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + + I GHTD+ N RLS RA + L+K G+ R+ + G+ Sbjct: 387 VDMPIIKKVRIEGHTDSQ---GADASNLRLSQKRADAVMAQLIKLGIDPGRLEAV-GYGE 442 Query: 318 HRLKIASDP--MNSANRRIDILVED 340 + ++ + NRR + + + Sbjct: 443 TKPIASNATKAGRAENRRTEFNIVE 467 >gi|238020688|ref|ZP_04601114.1| hypothetical protein GCWU000324_00578 [Kingella oralis ATCC 51147] gi|237867668|gb|EEP68674.1| hypothetical protein GCWU000324_00578 [Kingella oralis ATCC 51147] Length = 224 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 61/161 (37%), Gaps = 10/161 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 A+ + + L GV + I +++ F +S+ Sbjct: 63 ALACGAVGAGVGGYMDYQEKKLREQLQGSGVAVDRQGDQIKLTM---PAAVTFATNSATL 119 Query: 245 LPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + L + + LA T+ +I GHTD + N LS +RA S L + G Sbjct: 120 SAQAQNSLSQAAQTLATYTDTTITIVGHTDNT---GNDAINNPLSYNRAQSVANYLNQHG 176 Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 V+ +R+ +SG + + + NRR++IL+ Q Sbjct: 177 VAANRM-SVSGQGSRQPVADNSTEAGRAQNRRVEILINPDQ 216 >gi|332521842|ref|ZP_08398291.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332042514|gb|EGI78716.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 282 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 25/222 (11%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 S R E L +++ + ++ K + L++ KIS Sbjct: 46 ADEAASAARLQELKDRLADMKSSNQALIETSKDLTVLTTQGAKNVEKSLESLKEKDLKIS 105 Query: 201 STLSGLVADN----------------IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 L + + + ++ + IS+ D+ +F S Sbjct: 106 RLQDALTKKDSVTLALVTSLKKEVGLNDEDIEINVEKSVVFISLSDKL---LFKSGSYNI 162 Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMK 301 +L K+ V+ + GHTD P+ + +DNW LS+ R+ S + L + Sbjct: 163 TSRAKEILAKVATVINGKPNFEAMVEGHTDNVPYNRGGVLQDNWDLSVKRSTSIVRALQE 222 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 GV +++ G H +++D + NRR I + + Sbjct: 223 LGVKPEQLIAA-GRGDHLPLVSNDTAENRAINRRTKIYILPK 263 >gi|319790060|ref|YP_004151693.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1] gi|317114562|gb|ADU97052.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1] Length = 254 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 13/132 (9%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTD 273 T +LI + N +F ++S PE L +I +++ + + GHT Sbjct: 93 QIVVTENYVLIRLF---NKVLFKQNSLELTPEAKRALDQIAKIIKNLKGNYMVRVEGHTS 149 Query: 274 ----ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDP-M 327 P NI W LS+ RA + + L+ GV R+ + G+ R ++P + Sbjct: 150 KDEPTVPMPNIQDS-WDLSIRRATTVVRYLISRGVDPSRLMAV-GYDATRPLYTWNNPIL 207 Query: 328 NSANRRIDILVE 339 + NRR++I ++ Sbjct: 208 QARNRRVEIYIQ 219 Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 26/67 (38%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + ++ +W ++D M++L+ FF++++ ++ D YF Sbjct: 3 RRKKEECKSVPAWLTSFSDLMSLLLTFFILLYSMSTLDITKAMKFLSYFQGEKAQTFQQI 62 Query: 81 KGIFDEQ 87 + Q Sbjct: 63 SIVKPIQ 69 >gi|114563544|ref|YP_751057.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114334837|gb|ABI72219.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400] Length = 429 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 59/175 (33%), Gaps = 7/175 (4%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 SIN + L+ + Q + L + + E + Sbjct: 255 YSINNYSSEAYKELTSIVPWEKTIDAQQQISRDEALLLQQLLQTEIGKNLLEVEQLSDRV 314 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARD 283 I I +F ++ P + +L KI L + I I GHTD P + Sbjct: 315 RIRIGATE---LFASGNTQPRSDFEAILAKIALTLESTDGKILITGHTDDEPIFTSKYPS 371 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDI 336 NW LSL RA S VL S R+ G ++ + NRRI+I Sbjct: 372 NWHLSLARATSIANVLANSASLSGRLWP-EGRGESEPRVVNDNEQNRALNRRIEI 425 >gi|42783685|ref|NP_980932.1| flagellar motor protein MotB [Bacillus cereus ATCC 10987] gi|42739614|gb|AAS43540.1| sodium-driven polar flagellar protein PomB, putative [Bacillus cereus ATCC 10987] Length = 261 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 82/207 (39%), Gaps = 9/207 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +Q S K+ + K+ A +++ + +L Sbjct: 52 KQMAVAFRSELAGGTGNKEFLSDQKPNDEKELSASSLESEKIKKNAEAEVKQQEMNELKA 111 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + + T G+ ++I++ +FD + E++ + +++ Sbjct: 112 VQKGIDKYIEENRLSSSFKTDLTEKGLKVTILEN---VLFDSGKADVKLESLSIAKEMSN 168 Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314 +L + S I++ GHTD P N NW LS RA + QVL+++ + + S + G Sbjct: 169 LLVSASPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPGKFSAV-G 227 Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339 + +R +D + NRR+++ + Sbjct: 228 YGEYRSIAPNDTQEGKAKNRRVEVFIL 254 >gi|319944281|ref|ZP_08018557.1| outer membrane protein A [Lautropia mirabilis ATCC 51599] gi|319742576|gb|EFV94987.1| outer membrane protein A [Lautropia mirabilis ATCC 51599] Length = 220 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 F ++ E L I L + + GHTD+ N RLS+ RA + Sbjct: 111 FFGFDRAVLKDEGKQKLDDIVNQLDGVALEVIVAVGHTDSV---GPEAYNQRLSVRRAEA 167 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+ G+ +R+ G + + + NRR++I V + Sbjct: 168 VKAYLVSKGIEANRVYT-EGKGEAQPVADNKTKEGRAKNRRVEIEVVGSR 216 >gi|315607338|ref|ZP_07882338.1| OmpA family protein [Prevotella buccae ATCC 33574] gi|315251041|gb|EFU31030.1| OmpA family protein [Prevotella buccae ATCC 33574] Length = 284 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 Q + Q N S Q K E + + + + + Sbjct: 42 QDAKEQLAAANARVASLEDQLAQQKRDYASLQEMLDKSLVNANSNNINISKLVDQINESN 101 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + ++ K + L +++ L+ ++ +K V + + + IS+ D ++ Sbjct: 102 QYIRHLVEVKSKSDSLNMVLTNNLTRSLSKEELKEVDVQVLKGVVYISLADNM---LYKS 158 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA------RDNWRLSLDRA 292 S L KI +++ + + I G+TD P + R+NW LS RA Sbjct: 159 GSYEINDRAEETLSKIAKIIMDYKDYEVLIEGNTDNVPVNTDSPKMKNIRNNWDLSALRA 218 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 S Q L + GV R++ G + + NRR I++ + Sbjct: 219 SSVVQYLQNRYGVDPKRLTAG-GRGEYNPVATNSTELGKQRNRRTQIIITPK 269 >gi|319953189|ref|YP_004164456.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319421849|gb|ADV48958.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 604 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 6/110 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292 FD S+ + L+ I +L + + S+ GHTD + + N+ LS RA Sbjct: 498 NISFDTGSANISSSSQSTLETIYNLLIQAEDTKLSLEGHTDDT---GSSEANYDLSQRRA 554 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 + L G+ + R + G ++ + NRR+ I++ Sbjct: 555 QAVVNFLRTKGIPQTRFQNVIGKGEDEPVESNTTNSGRAKNRRVVIVLLK 604 >gi|123442902|ref|YP_001006877.1| putative OmpA family protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089863|emb|CAL12719.1| putative OmpA family protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 458 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 4/110 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLD 290 + MF S E + V++++ + + + I GHTD+ P + +N LS Sbjct: 348 KGDTMFQVGSDKVRSEIMSVIERVAQEVHRVQGAVLIIGHTDSMPINKPGFPNNQVLSEK 407 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + + + K+G+ D+I + G + ++D NRR++I V Sbjct: 408 RAANVARFMEKAGIPTDKI-QFEGKGDTQPVSSNDDAAGRSQNRRVEIFV 456 >gi|157164740|ref|YP_001466195.1| outer membrane fibronectin-binding protein [Campylobacter concisus 13826] gi|112801501|gb|EAT98845.1| outer membrane fibronectin-binding protein [Campylobacter concisus 13826] Length = 337 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 9/124 (7%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273 V+ + +I + D F S P+ ++K+ + + + + GHTD Sbjct: 215 VVVDERGCEKVIVLRDLDVN--FAFDSYKVGPKYAAEIKKVADFMGEHPDYKVVLAGHTD 272 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331 + N +LS RA + +VL GV + +IS + G+ + + + N Sbjct: 273 SV---GAEAYNQKLSEKRAKAVAEVLAGYGVEKAKISTV-GYGELKPIATNKTKEGRAQN 328 Query: 332 RRID 335 RR++ Sbjct: 329 RRVE 332 >gi|254302232|ref|ZP_04969590.1| outer membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322424|gb|EDK87674.1| outer membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 196 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 5/117 (4%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 +I+ FD S P+ +L + E + + ++I GHTD + N Sbjct: 59 TIVLDDRALNFDFDKSFVKPQYDEMLTNLKEFITKNDYEVTIVGHTD---YIASNEYNMG 115 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 LS RA + L++ G+ RI + + + NRR++ + R Sbjct: 116 LSKRRAEAVKAKLIELGLDPSRIVETVARGEEEPVADNSTTEGRAKNRRVEFKLVKR 172 >gi|118474477|ref|YP_891591.1| outer membrane fibronectin-binding protein [Campylobacter fetus subsp. fetus 82-40] gi|118413703|gb|ABK82123.1| outer membrane fibronectin-binding protein [Campylobacter fetus subsp. fetus 82-40] Length = 345 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 93/258 (36%), Gaps = 15/258 (5%) Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 + + + S + + T+ + D++ G Q L N Sbjct: 93 NLVKDFAITDTISVYGLIGVGYQDFTREANDVEDGGFAQAG----LGLKYKITDNFALKA 148 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 +++L ++ L P L +E+ K + Sbjct: 149 EARDALDWNNGSNTFLYTLGFAVGFGESRSAAPAPVLVEEQPAPAPTKIVPAIGDEDGDG 208 Query: 202 TLSGLVAD-NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + KGV+ + +I + + N F S+ PE ++++ +V+ Sbjct: 209 VLDNVDRCPGTPKGVVVDEYGCEKVIRLSLKAN---FAFDSAKVTPEYEAKIKEVADVMV 265 Query: 261 HSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + E I GHTD++ N +LS+ RA + L K GVS+++I+ + GF + Sbjct: 266 ANPEYRVILEGHTDST---GPEDYNKKLSVKRADAVAATLEKMGVSKNKITTV-GFGEEQ 321 Query: 320 LKIASDP--MNSANRRID 335 ++ + NRR++ Sbjct: 322 PIASNATKEGRAENRRVE 339 >gi|313205418|ref|YP_004044075.1| ompa/motb domain protein [Paludibacter propionicigenes WB4] gi|312444734|gb|ADQ81090.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4] Length = 598 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 93/283 (32%), Gaps = 17/283 (6%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLS---IDEHITKNSVDLKIGSTN 119 K+I+ P +++ ++Q + NK + S I +I ++V K+ S + Sbjct: 325 KSIDTSALPPNSIAVSSVIKTPEQQIAIPENDFNKNNQSLSTISPNIKSDTVSNKLQSGS 384 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + + +++ S + T DS D+ + + Sbjct: 385 KSIVENYNSPKVISNTSTASSGQSEKVSTVDSVNKTASRLPVDISIANVSSSTQGNKVVE 444 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + +L + I++ I FD Sbjct: 445 NSVNVDSDGDGTPDNLDMC-------PNLAGVASNRGCPEISRRIILLFIKALTGIKFDS 497 Query: 240 SSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + +L +I + L + I + GHTD+ + +R N LS RA + Sbjct: 498 GKDKLKKRSYTILNEIAKELIKNPAYFIEVHGHTDS---KGNSRANKLLSELRASAVRNY 554 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L++ GV +RI + G+ + + NRR++ V Sbjct: 555 LIRRGVDGNRIKSV-GYGDKMPVATNKTVKGRTLNRRVEFNVT 596 >gi|229105135|ref|ZP_04235786.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28] gi|228678316|gb|EEL32542.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28] Length = 233 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 9/207 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +Q S K+ + N K+ A +++ + +L Sbjct: 24 KQMAVAFRSELAGGTGNKEFLSDQKPNEEKELSANSLESEQIKKNAEAEVKQQEMNELKA 83 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + T G++++I++ +FD + E++ + +++ Sbjct: 84 VQKGIDKYIEEKQLSSSFKTDLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSN 140 Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISG 314 +L + S I++ GHTD P N NW LS RA + Q +L + + S I G Sbjct: 141 LLVSASPREITVSGHTDTVPIANAQFASNWELSTQRAVNFMQVLLQNKDLQPGKFSAI-G 199 Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339 + +R +D + NRR+++ + Sbjct: 200 YGEYRSIAPNDTPEGKAKNRRVEVFIL 226 Score = 50.3 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 1/92 (1%) Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 +T+L A F+V++ +++ D K + F T +K +Q P E + Sbjct: 1 MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR-SELAGGTGNKEFLSDQKPNEEKELSANS 59 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 L ++ ++K N+ K Q+ + Sbjct: 60 LESEQIKKNAEAEVKQQEMNELKAVQKGIDKY 91 >gi|289766688|ref|ZP_06526066.1| outer membrane protein [Fusobacterium sp. D11] gi|289718243|gb|EFD82255.1| outer membrane protein [Fusobacterium sp. D11] Length = 180 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 5/154 (3%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +Q L S + +K + + ++I+ + FD SI + Sbjct: 15 AVQALTTTQMRENSIRINALELKDIDILNSEAPKEMTIVLDERSLNFDFDKSIVKAQYFD 74 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L+ I E + + I+I GHTD+ + N+ LS RA + L++ G++EDRI Sbjct: 75 LLKNIKEFVEQNNYEITIVGHTDSI---GSNQYNFGLSRRRAEAVKAKLLEFGLAEDRIV 131 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 I + + + NRR++ + R+ Sbjct: 132 GIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 165 >gi|284037622|ref|YP_003387552.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283816915|gb|ADB38753.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 241 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 7/123 (5%) Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279 + ++ + + FD+SS + PE+ L K+ + L + VI I GHTD Sbjct: 122 FRDLQVNQAFRLDNVYFDQSSYVLRPESYPQLNKLIKTLVTIPKLVIEIAGHTDNV---G 178 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 R N LS +RA L+ +G+ E+R+ + +G+ + +D NRR++ + Sbjct: 179 DKRLNQALSENRAKIITNYLVTNGIPENRL-RHNGYGSSKPAAPNDTEENKRKNRRVEFV 237 Query: 338 VED 340 V Sbjct: 238 VLA 240 >gi|237742848|ref|ZP_04573329.1| outer membrane protein [Fusobacterium sp. 4_1_13] gi|229430496|gb|EEO40708.1| outer membrane protein [Fusobacterium sp. 4_1_13] Length = 164 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 7/144 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 ++++ + L E + I + D+ FD S P+ +L + E + Sbjct: 3 ANSIRINALEINKMEALKEEPPEEMTIVLDDRALN--FDFDKSFVKPQYDEMLTNLKEFI 60 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + ++I GHTD + + N LS RA + L++ G+ RI I Sbjct: 61 MKNDYELTIEGHTD---YIASNQYNMGLSKRRAEAVKAKLIELGLDPSRIVAIVPKGEEE 117 Query: 320 LKIASDP--MNSANRRIDILVEDR 341 + + NRR++ + R Sbjct: 118 PVADNKTTEGRAKNRRVEFKLVKR 141 >gi|254181403|ref|ZP_04888000.1| ompA family protein [Burkholderia pseudomallei 1655] gi|184211941|gb|EDU08984.1| ompA family protein [Burkholderia pseudomallei 1655] Length = 215 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F P ++L + L + ++ S+ G+TD++ A N LS + Sbjct: 103 PSSVTFATDQYAITPAFTLLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + GV+ +R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNALAQRGVAANRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212 >gi|153871249|ref|ZP_02000470.1| outer membrane protein OprF [Beggiatoa sp. PS] gi|152072284|gb|EDN69529.1| outer membrane protein OprF [Beggiatoa sp. PS] Length = 188 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 9/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDR 291 F+ S+ E L + + L I GHTD N LS R Sbjct: 80 RVYFESDSTRIKAEFYPWLHQYAKTLQSELAETMIEIGGHTDNI---GSDEYNKDLSQRR 136 Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDR 341 A + +L+ K +S +R+ + G+ ++ + + NRR+++ + + Sbjct: 137 AQAVKNILLSKYKISANRLI-VKGYGENQPLDVNENREGRAINRRVELKIVPK 188 >gi|325920257|ref|ZP_08182205.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865] gi|325549250|gb|EGD20156.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865] Length = 224 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS +K+++ K + L+ +A R ++ I R + Sbjct: 43 QLSSRLDEEVKQRQVEAQRRKTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S PE VL+ + L E++ + G TD P DNW LS Sbjct: 93 FAFNSDQLQPEGREVLKTLAAPLKEYLSSREEILMVSGFTDDRPVLGGNRRYADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ GV + + F + ++ + + NRR++I Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADETRRAKNRRVEI 200 >gi|257470656|ref|ZP_05634746.1| Outer membrane protein [Fusobacterium ulcerans ATCC 49185] Length = 217 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 50/143 (34%), Gaps = 10/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L V + +++ F SS + L I VL Sbjct: 78 DRQEQELRERLKNTEVQVSQNGDNLNLNL---PGGVTFATDSSNIVSSFYGPLNSIATVL 134 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E I + G+TD A N LS RA S L++ GVS RIS + G+ Sbjct: 135 VQYPETRIIVNGYTDNV---GSASYNVSLSERRAASVRNYLIQQGVSARRISYV-GYGME 190 Query: 319 RLKIASDPM--NSANRRIDILVE 339 + + + NRR+++ + Sbjct: 191 NPRATNSTAAGRAENRRVELEIL 213 >gi|88798412|ref|ZP_01113997.1| OmpA/MotB [Reinekea sp. MED297] gi|88778852|gb|EAR10042.1| OmpA/MotB [Reinekea sp. MED297] Length = 373 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 52/143 (36%), Gaps = 7/143 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L T + + F S+ + V LQ+ L Sbjct: 219 RALPEPTPIPEPAAPEPITPPEPVCAEFNGAIDAIQFAVDSAQLNDTSRVRLQEAANTLR 278 Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + I I HTD++ N LS RA + L++ G+ E R++ +G+ + Sbjct: 279 QFPDINIQIEAHTDST---ASEAYNLSLSDQRAQAIRDYLIELGIDEQRLTA-TGYGESQ 334 Query: 320 LKIASDPMNSA--NRRIDILVED 340 + +++ NRR++ +ED Sbjct: 335 PRASNESEEGRSLNRRVEFRMED 357 >gi|332085086|gb|EGI90266.1| inner membrane lipoprotein yiaD [Shigella boydii 5216-82] Length = 238 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 99 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 155 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 156 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 211 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 212 PANPIASNSTAEGKAQNRRVEITL 235 >gi|300723438|ref|YP_003712743.1| hypothetical protein XNC1_2522 [Xenorhabdus nematophila ATCC 19061] gi|297629960|emb|CBJ90580.1| Conserved hypothetical protein with OmpA/MotB domains (probable component of SST VI cluster) [Xenorhabdus nematophila ATCC 19061] Length = 406 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 6/118 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR---D 283 SII + +F S+ +++ I E L I + G+TD P + Sbjct: 282 SIIVLKGDGLFKSSAIQIKSRYSAIIKHIAEALNSLQGNILVVGYTDNIPVSSRRSHFLS 341 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 N+ LSL RA S + L + +R+S G +D + NRR++I + Sbjct: 342 NYALSLARAKSVQRELQRYLNQPERVSA-EGKGAENPIAPNDTRSNRAKNRRVEITLL 398 >gi|146329067|ref|YP_001209253.1| OmpA family protein [Dichelobacter nodosus VCS1703A] gi|146232537|gb|ABQ13515.1| OmpA family protein [Dichelobacter nodosus VCS1703A] Length = 298 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 91/299 (30%), Gaps = 30/299 (10%) Query: 44 LMAFFLVMWIINA----TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 LMA + ++ A +DD ++ + + + N D Sbjct: 16 LMALIVPAFLSQAFAQDSDDGVRQVNHVRWYKKQAVDFSNTANQSAPNNSASLIFVRTDD 75 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 + +V+ + ++ Q +Y ++ + S +++ + L Sbjct: 76 ADSVDTSANIAVNGRFQTSLQAGKYSQVYSCSGVNYISVLPTQERSNDLQFDATPYQLSA 135 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 ++ + + + A + R +IS + + Sbjct: 136 GYTYFFLVDVDNSGRAQITGISRSQAEQYFARASMQTHQISRVVPNCPPAPARIELKI-- 193 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR 278 +FD + ++ + L ++ GHTD+ Sbjct: 194 ----------------LFDNDKHFVKQQYYSEIETVAGYLRQYPNTTVTLEGHTDS---N 234 Query: 279 NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 + N LS R + VL++ G+S RIS + G+ + +++ NRR+ Sbjct: 235 ASEQYNINLSQRRVNAVRDVLIQHYGISPARISAV-GYGESQPIASNNTAAGRQQNRRV 292 >gi|194334296|ref|YP_002016156.1| OmpA/MotB domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194312114|gb|ACF46509.1| OmpA/MotB domain protein [Prosthecochloris aestuarii DSM 271] Length = 229 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 10/140 (7%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 DN V G E GI + + +F +SS + +QK+ +L Sbjct: 80 DAQAEEIDNSVDGATVERVGEGIRVVF---DSGLLFSTASSTLTSTSRYNIQKLASILNK 136 Query: 262 STEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + GHTD+ N +LS +RA S +L GV RIS + G+ R Sbjct: 137 YEDTNVVIEGHTDSV---GTESSNQQLSENRAESVASLLRAYGVYGSRISTV-GYGETRP 192 Query: 321 KIASDPMNSA--NRRIDILV 338 +++ NRR+++L+ Sbjct: 193 VASNETAQGKKLNRRVEVLI 212 >gi|330959172|gb|EGH59432.1| ompA family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 260 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 84/240 (35%), Gaps = 13/240 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 TK + +L+ +N E ++ + + + +D+ K L Sbjct: 21 ATKPNPNLEQARSNYTALQTNPEATKVAALETKDASEWLDKAEKAFRDDEDVKKVDQLAY 80 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N+ ++ A + ++ + + + + T G L Sbjct: 81 LTNQRVELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 ++ D +FD + + P + K+ L + + + G+TD++ A N Sbjct: 139 VTFGD----VLFDYNKADLKPTAQGDIGKLAAFLQENPDRKVIVEGYTDST---GSASYN 191 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 LS RA S L++ GV R+ + G+ + + + NRR+++ + + Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSNSGRAMNRRVEVTISNDN 250 >gi|319793927|ref|YP_004155567.1| type IV / vi secretion system protein, dotu family [Variovorax paradoxus EPS] gi|315596390|gb|ADU37456.1| type IV / VI secretion system protein, DotU family [Variovorax paradoxus EPS] Length = 458 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 7/141 (4%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L ++ V + +S MF + + + VL K+ + + + Sbjct: 309 LASEIARGTVSVDEDEHRSAVSFRGDD---MFVPGQARLNAKILPVLDKVADEINQVSGS 365 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + + GH+D P + +N LS RA + VL+ GV RI + G S Sbjct: 366 VQVTGHSDNRPIKTREFPNNQVLSEKRADAVTAVLLGKGVVASRI-RTEGRGDTMPVADS 424 Query: 325 DPM--NSANRRIDILVEDRQG 343 + NRR+DI+V G Sbjct: 425 ATAAGRARNRRVDIVVIQGDG 445 >gi|297538022|ref|YP_003673791.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301] gi|297257369|gb|ADI29214.1| OmpA/MotB domain protein [Methylotenera sp. 301] Length = 616 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 16/218 (7%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + + + + + + G K N + + +K + Sbjct: 412 YDIQTAYARTYAGQGELLNKIGAARGGLPEYKRESYMDDENICQAVAPVQETVDKAALLA 471 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 K L +S + V + ++ + F+ +S+ Sbjct: 472 DAKPLSSTISIAKPVVSAVEPAK----VEVKPMANKVVPDVQ-------FETNSAKIKEI 520 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + VL L + + + GHTD + A N RLS RA + ++K G+ Sbjct: 521 SYPVLDNAINTLKEWGDSNVEVGGHTDQR-DTSKADYNQRLSEKRAKAVMDYIVKKGIDA 579 Query: 307 DRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 R+S G+ + + +DP NRR++++ E ++ Sbjct: 580 KRLSA-KGYGYSKPIAENDPKEGNLVNRRVELVREQKK 616 >gi|241764514|ref|ZP_04762534.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN] gi|241366050|gb|EER60654.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN] Length = 212 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ PE L + + + I GHTD+ N +LS+ R+ Sbjct: 102 DAFFDFDKSVLKPEGKAKLDDLVSKVKDINLEVIIAVGHTDSV---GTDAYNQKLSVRRS 158 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L+ G+ ++R+ G + + + NRR++I V + Sbjct: 159 EAVKAYLVSKGIEKNRVYT-EGKGEKQPVADNKTKEGRAKNRRVEIEVVGTR 209 >gi|229062194|ref|ZP_04199517.1| OmpA/MotB domain protein [Bacillus cereus AH603] gi|229169237|ref|ZP_04296950.1| OmpA/MotB domain protein [Bacillus cereus AH621] gi|228614220|gb|EEK71332.1| OmpA/MotB domain protein [Bacillus cereus AH621] gi|228717088|gb|EEL68766.1| OmpA/MotB domain protein [Bacillus cereus AH603] Length = 233 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 82/207 (39%), Gaps = 9/207 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +Q S K+ ++ + K+ A +K+ + +L Sbjct: 24 KQMAVAFRSELAGGTGNKEFLSDQKPKEEKELSASSLESEKIKKDAEAEVKKQEMNELKA 83 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + T G++++I++ +FD + E++ + +++ Sbjct: 84 VQKGIDKYIEEKQLSSSFKTDLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSN 140 Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISG 314 +L + S I++ GHTD P N NW LS RA + Q +L + ++ S I G Sbjct: 141 LLVSASPREITVSGHTDTVPIANAQFASNWELSTQRAVNFMQVLLQNKDLQPEKFSAI-G 199 Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339 + +R +D + NRR+++ + Sbjct: 200 YGEYRSIAPNDTPEGKAKNRRVEVFIL 226 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 1/92 (1%) Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 +T+L A F+V++ +++ D K + F T +K +Q P E + Sbjct: 1 MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR-SELAGGTGNKEFLSDQKPKEEKELSASS 59 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 L ++ ++K N+ K Q+ + Sbjct: 60 LESEKIKKDAEAEVKKQEMNELKAVQKGIDKY 91 >gi|90581117|ref|ZP_01236916.1| Putative OmpA family protein [Vibrio angustum S14] gi|90437638|gb|EAS62830.1| Putative OmpA family protein [Vibrio angustum S14] Length = 229 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L G+ I++++ N F + + L + Sbjct: 89 YMDVQEAKLRKQLSSSGITVTRNGDNIVLNM---PNEITFGFDQANLNDRAMNALHNVAI 145 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V +++ G TD+ + A N RLS RA + L++ GV+ +R+ G Sbjct: 146 VAKEYEKTQLNVLGFTDS---KGAASYNLRLSQVRADAVANYLIRQGVNANRVVS-QGRG 201 Query: 317 HHRLKIASDPM--NSANRRIDILV 338 ++ + NRR++I++ Sbjct: 202 ESNPIASNSTANGRAQNRRVEIIL 225 >gi|53718641|ref|YP_107627.1| OmpA family transmembrane protein [Burkholderia pseudomallei K96243] gi|53725212|ref|YP_102481.1| ompA family protein [Burkholderia mallei ATCC 23344] gi|67639751|ref|ZP_00438587.1| OmpA family protein [Burkholderia mallei GB8 horse 4] gi|121600283|ref|YP_993611.1| ompA family protein [Burkholderia mallei SAVP1] gi|124385832|ref|YP_001028928.1| ompA family protein [Burkholderia mallei NCTC 10229] gi|126440263|ref|YP_001058104.1| ompA family protein [Burkholderia pseudomallei 668] gi|126449467|ref|YP_001081159.1| ompA family protein [Burkholderia mallei NCTC 10247] gi|126452105|ref|YP_001065339.1| ompA family protein [Burkholderia pseudomallei 1106a] gi|134281074|ref|ZP_01767783.1| OmpA family protein [Burkholderia pseudomallei 305] gi|167003046|ref|ZP_02268836.1| OmpA family protein [Burkholderia mallei PRL-20] gi|167718574|ref|ZP_02401810.1| ompA family protein [Burkholderia pseudomallei DM98] gi|167814738|ref|ZP_02446418.1| ompA family protein [Burkholderia pseudomallei 91] gi|167901748|ref|ZP_02488953.1| ompA family protein [Burkholderia pseudomallei NCTC 13177] gi|217419903|ref|ZP_03451409.1| ompA family protein [Burkholderia pseudomallei 576] gi|226194470|ref|ZP_03790068.1| ompA family protein [Burkholderia pseudomallei Pakistan 9] gi|237811323|ref|YP_002895774.1| OmpA family protein [Burkholderia pseudomallei MSHR346] gi|242316655|ref|ZP_04815671.1| ompA family protein [Burkholderia pseudomallei 1106b] gi|254177848|ref|ZP_04884503.1| ompA family protein [Burkholderia mallei ATCC 10399] gi|254190801|ref|ZP_04897308.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] gi|254196800|ref|ZP_04903224.1| ompA family protein [Burkholderia pseudomallei S13] gi|254261713|ref|ZP_04952767.1| ompA family protein [Burkholderia pseudomallei 1710a] gi|254298274|ref|ZP_04965726.1| ompA family protein [Burkholderia pseudomallei 406e] gi|254357860|ref|ZP_04974133.1| OmpA family protein [Burkholderia mallei 2002721280] gi|52209055|emb|CAH34995.1| putative OmpA family transmembrane protein [Burkholderia pseudomallei K96243] gi|52428635|gb|AAU49228.1| ompA family protein [Burkholderia mallei ATCC 23344] gi|121229093|gb|ABM51611.1| ompA family protein [Burkholderia mallei SAVP1] gi|124293852|gb|ABN03121.1| ompA family protein [Burkholderia mallei NCTC 10229] gi|126219756|gb|ABN83262.1| ompA family protein [Burkholderia pseudomallei 668] gi|126225747|gb|ABN89287.1| ompA family protein [Burkholderia pseudomallei 1106a] gi|126242337|gb|ABO05430.1| ompA family protein [Burkholderia mallei NCTC 10247] gi|134247380|gb|EBA47465.1| OmpA family protein [Burkholderia pseudomallei 305] gi|148026987|gb|EDK85008.1| OmpA family protein [Burkholderia mallei 2002721280] gi|157808098|gb|EDO85268.1| ompA family protein [Burkholderia pseudomallei 406e] gi|157938476|gb|EDO94146.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] gi|160698887|gb|EDP88857.1| ompA family protein [Burkholderia mallei ATCC 10399] gi|169653543|gb|EDS86236.1| ompA family protein [Burkholderia pseudomallei S13] gi|217397207|gb|EEC37223.1| ompA family protein [Burkholderia pseudomallei 576] gi|225933555|gb|EEH29544.1| ompA family protein [Burkholderia pseudomallei Pakistan 9] gi|237503911|gb|ACQ96229.1| OmpA family protein [Burkholderia pseudomallei MSHR346] gi|238520349|gb|EEP83810.1| OmpA family protein [Burkholderia mallei GB8 horse 4] gi|242139894|gb|EES26296.1| ompA family protein [Burkholderia pseudomallei 1106b] gi|243061351|gb|EES43537.1| OmpA family protein [Burkholderia mallei PRL-20] gi|254220402|gb|EET09786.1| ompA family protein [Burkholderia pseudomallei 1710a] Length = 215 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F P +L + L + ++ S+ G+TD++ A N LS + Sbjct: 103 PSSVTFATDQYAITPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + GV+ +R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNALAQRGVAANRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212 >gi|330872771|gb|EGH06920.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330964108|gb|EGH64368.1| ompA family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 260 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 84/240 (35%), Gaps = 13/240 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 TK + +L+ +N E+ ++ + + D+ K L Sbjct: 21 ATKPNPNLEQARSNFTALQTNPESTKVAALETKDASEWLAKAEQAFRNDDDVKKVDQLSY 80 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N+ ++ A + ++ + + + + T G L Sbjct: 81 LTNQRVELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 ++ D +FD + + P + K+ L +T+ + G+TD++ A N Sbjct: 139 VTFGD----VLFDYNKAELKPTAQGDIGKLAAFLQENTDRKVIVEGYTDST---GSASYN 191 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 LS RA S L++ GV R+ + G+ + + + NRR+++ + + Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSNSGRAMNRRVEVTISNDN 250 >gi|257452971|ref|ZP_05618270.1| Outer membrane protein [Fusobacterium sp. 3_1_5R] Length = 217 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 10/145 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A V + I + + F S+ L I +VL Sbjct: 78 DQQEAALRASLKNTAVQVQRDGENISLYL---PGGVTFASDSAQISGNFYSALNSIAQVL 134 Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E ++GHTD++ + N LS RA S L+ GV+ +R+ GF + Sbjct: 135 VQYPETQILVQGHTDST---GSFQHNMDLSNRRANSVKHYLIGQGVASNRLMS-QGFGPN 190 Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341 + + NRR++I + + Sbjct: 191 NPVADNSTPDGRQMNRRVEIKIAPK 215 >gi|237703321|ref|ZP_04533802.1| OmpA family protein [Escherichia sp. 3_2_53FAA] gi|226902585|gb|EEH88844.1| OmpA family protein [Escherichia sp. 3_2_53FAA] gi|315285303|gb|EFU44748.1| OmpA family protein [Escherichia coli MS 110-3] gi|323954903|gb|EGB50683.1| OmpA family protein [Escherichia coli H263] Length = 219 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GSHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|304391383|ref|ZP_07373325.1| inner membrane lipoprotein YiaD [Ahrensia sp. R2A130] gi|303295612|gb|EFL89970.1| inner membrane lipoprotein YiaD [Ahrensia sp. R2A130] Length = 219 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L A+ GV I++++ F+ S+ + VL + Sbjct: 79 YQDNQEAKLRAELQNTGVSVSRVGNDIVLNMPSNIT---FNSGSADLKAQFFRVLNSVAL 135 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ GHTD+ + N +LS R + Q L++ G R + G+ Sbjct: 136 VLKEYNKTLVNVSGHTDSD---GSDQFNQQLSERRGVNVAQYLVQQGTDSRRYY-VVGYG 191 Query: 317 HHRLKIASDPMNSA--NRRIDILV 338 R ++ NRR++I + Sbjct: 192 EERPIASNASAAGKEQNRRVEIRL 215 >gi|310822654|ref|YP_003955012.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309395726|gb|ADO73185.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1] Length = 653 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 80/255 (31%), Gaps = 14/255 (5%) Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 P + + + + L G + LS S ++ + T Sbjct: 409 PLPGGAIRIAIQKDGYRLAERDLTLVPGQPQTVEVALESMAQPATLSFSTTAQKKPVAAT 468 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 + +T + + + + +Q S L Sbjct: 469 LRLSGPQKQELATSAAAPTKLVLPPGHYLVDVMAPGYLAQTREVQVAEGTAQSFAFDLKP 528 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVIS 267 K V + +L + F ++ + +L ++ +V+ ++ + + Sbjct: 529 APKKKLVTVADNKLALLQQVQ-------FADGKAVIQANSQPLLAQVVDVIVRNNIQRVR 581 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + HTD N +LS +RA + L +SG+ R+ ++ G+ R + Sbjct: 582 VEAHTDNQ---GNPAANLKLSQERAQAVATFLAQSGLDAARM-EVQGYGDARPIAPNLTP 637 Query: 328 NSA--NRRIDILVED 340 NRR++ ++ + Sbjct: 638 RGKELNRRVEFIILE 652 >gi|261342404|ref|ZP_05970262.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316] gi|288315039|gb|EFC53977.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316] Length = 451 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 4/111 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLD 290 + +F S PE + V+++I + + I GHTDA+P +N LS Sbjct: 341 KGDALFLSGSVRVQPEMVKVIERIASEVRRVNGDVVIVGHTDATPISRPGLPNNVVLSEK 400 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 RA Q + +G+ E ++ + G + + + NRR++ V Sbjct: 401 RAAEVAQYFISAGLPESKVK-VRGVGSSQPVASDATAQGRAKNRRVEFFVT 450 >gi|113866689|ref|YP_725178.1| outer membrane protein [Ralstonia eutropha H16] gi|113525465|emb|CAJ91810.1| outer membrane protein [Ralstonia eutropha H16] Length = 425 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 12/160 (7%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RNTPMFDKSSS 242 L+ I + L + +IS+ + R MF + Sbjct: 266 DLEQQILAIGKATPPEPPKALRLAELLKDEIARGVISVQEDATRSAVTFRGDDMFGGGRA 325 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 + + +L K+ + + +++ GH+D P + N LS +RA + + L Sbjct: 326 EVSDKVLPLLDKVAGEINKVSGKVTVVGHSDNVPIKTAKYPSNQVLSEERAATVTEYLAS 385 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 GV+++R+ I G + + NRR++I+V Sbjct: 386 KGVAKNRLEAI-GKGDSEPLTDNKTPAARARNRRVEIVVT 424 >gi|104782672|ref|YP_609170.1| OmpA family outer membrane protein [Pseudomonas entomophila L48] gi|95111659|emb|CAK16380.1| putative outer membrane protein; OmpA family [Pseudomonas entomophila L48] Length = 269 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 88/266 (33%), Gaps = 10/266 (3%) Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K + Q + + S + + + I + ++ Sbjct: 5 KPMAALALLALVGLQGCASQRSESALDDASAAFQKVKDDSNVLRSAPRDVIRAGESLGRA 64 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 E + S+ S + ++ L K+ +++ +L K++ Sbjct: 65 ERLAGYIGTGSDVRHYAYLSQRYSEIASEHAKLALNQERLAKLDLERQRLQLGLREAKLA 124 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 S L L+ +FD + K+ + L Sbjct: 125 SVQQQGKWVEAQIVALASEQTDRGLVM---TLGDVLFDTGEADLKNSASRTALKLVQFLQ 181 Query: 261 -HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + V+ I G+TD++ DN +LS DRA + +L+ GV E RI ++ G+ Sbjct: 182 LNPRRVVRIEGYTDST---GNPEDNLKLSRDRAQAVADMLVDLGVDEKRI-QVEGYGDQY 237 Query: 320 LKIASDPM--NSANRRIDILVEDRQG 343 A+ + NRR++I+ D +G Sbjct: 238 PVEANASERGRAQNRRVEIVFSDDKG 263 >gi|187251173|ref|YP_001875655.1| peptidoglycan-associated (lipo)protein [Elusimicrobium minutum Pei191] gi|186971333|gb|ACC98318.1| peptidoglycan-associated (lipo)protein-like outer membrane protein [Elusimicrobium minutum Pei191] Length = 189 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 61/147 (41%), Gaps = 10/147 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + +++ + T +++ +F+ +S E+ L+K+ Sbjct: 50 HQAKPEPKNLSEEVSGYASVRQAGTKQVVTFT---TPILFETNSDKLKTESYDPLKKVAV 106 Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + + ++G+TD+ N LS RA S VL+++GV+E ++ G+ Sbjct: 107 VLKARPNMQTEVKGYTDSL---GDPAYNVVLSEKRANSVRNVLVENGVNEANVTA-KGYG 162 Query: 317 HHRLKIASDP--MNSANRRIDILVEDR 341 + + NRR+++ + ++ Sbjct: 163 AADPIADNKTKEGRAKNRRVELDITNK 189 >gi|259907293|ref|YP_002647649.1| hypothetical protein EpC_06170 [Erwinia pyrifoliae Ep1/96] gi|224962915|emb|CAX54396.1| Type VI secretion system, OmpA/MotB [Erwinia pyrifoliae Ep1/96] gi|283477112|emb|CAY73012.1| putative type VI secretion system, core protein [Erwinia pyrifoliae DSM 12163] Length = 413 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 7/141 (4%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V+ ++++ + +F +S+ VL ++ + + + Sbjct: 264 LKPEIEQGLVVVRDEADRSVVTL---KGDGLFTSASTDVRGRYAEVLDRVAAAMNNVSGR 320 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I + G++D P R+ N+ LSL RA S + L + R+ G + Sbjct: 321 ILVVGYSDNVPIRSARFASNYELSLARAQSVSEQLQQHLTQPQRVKA-EGRGDSNPLAPN 379 Query: 325 DPM--NSANRRIDILVEDRQG 343 + + NRR++I + G Sbjct: 380 NSAGNRARNRRVEITLLVSPG 400 >gi|157149164|ref|YP_001456483.1| putative outer membrane lipoprotein [Citrobacter koseri ATCC BAA-895] gi|157086369|gb|ABV16047.1| hypothetical protein CKO_05004 [Citrobacter koseri ATCC BAA-895] Length = 220 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMQGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV+ +RI + SG Sbjct: 137 VLKEYNKTAVNVVGYTDST---GGQDLNMRLSQQRADSVASALITQGVAANRI-RTSGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|256027094|ref|ZP_05440928.1| Outer membrane protein [Fusobacterium sp. D11] gi|289765073|ref|ZP_06524451.1| outer membrane protein [Fusobacterium sp. D11] gi|289716628|gb|EFD80640.1| outer membrane protein [Fusobacterium sp. D11] Length = 151 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 5/117 (4%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 +I+ FD S+ P+ +L + + + + ++I GHTD + N Sbjct: 13 TIVLDDRALNFDFDKSVVKPQYNEMLTNLKDFIEKNDYEVTIVGHTD---YIASNAYNMG 69 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 LS RA + L++ G+ RI I + + NRR++ + R Sbjct: 70 LSKRRAEAVKAKLIELGLDPSRIVGIVPRGEEEPIADNATTEGRAKNRRVEFKLVKR 126 >gi|269119617|ref|YP_003307794.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386] gi|268613495|gb|ACZ07863.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386] Length = 179 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 11/157 (7%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 K++++ +I++ V + + + + I N FD S PE Sbjct: 24 KQMRNDTIRINALEVEFVEEKAAVQEVKQNGSGEVKKIIRLNENKLYFDFDDSRIKPEYY 83 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L+++ E + + IRG+TD+ + N RLS RA S L++ G+ R+ Sbjct: 84 GLLREMVEEIKAMDSDVIIRGYTDS---KGTDEYNNRLSQRRAESVRDKLIEFGLESGRV 140 Query: 310 SKISGFAHHRLKIASD--------PMNSANRRIDILV 338 K G + + NRRI++ + Sbjct: 141 LKTEGMGERNPIAPNTNKDGSDNPAGRALNRRIELEL 177 >gi|157889051|dbj|BAF80990.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + PE +Q++G++L + + +I GHTD++ N +LSL+RA + Sbjct: 224 FGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST---GPKAYNQKLSLERANAV 280 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + L K+GV++++I G+ + K ++D + NRR++ Sbjct: 281 AKELEKTGVAKEKIVT-KGYGFEKPKASNDTKEGRAQNRRVE 321 >gi|157889046|dbj|BAF80986.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + PE +Q++G++L + + +I GHTD++ N +LSL+RA + Sbjct: 224 FGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST---GPKAYNQKLSLERANAV 280 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + L K+GV++++I G+ + K ++D + NRR++ Sbjct: 281 AKELEKTGVAKEKIVT-KGYGFEKPKASNDTKEGRAQNRRVE 321 >gi|157889041|dbj|BAF80982.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + PE +Q++G++L + + +I GHTD++ N +LSL+RA + Sbjct: 224 FGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST---GPKAYNQKLSLERANAV 280 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + L K+GV++++I G+ + K ++D + NRR++ Sbjct: 281 AKELEKTGVAKEKIVT-KGYGFEKPKASNDTKEGRAQNRRVE 321 >gi|157889031|dbj|BAF80974.1| fibronectin-binding protein [Campylobacter lari] gi|157889036|dbj|BAF80978.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + PE +Q++G++L + + +I GHTD++ N +LSL+RA + Sbjct: 224 FGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST---GPKAYNQKLSLERANAV 280 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + L K+GV++++I G+ + K ++D + NRR++ Sbjct: 281 AKELEKTGVAKEKIVT-KGYGFEKPKASNDTKEGRAQNRRVE 321 >gi|114319490|ref|YP_741173.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114225884|gb|ABI55683.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 224 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 10/143 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV +++++ F S+ + VL + Sbjct: 83 YMDRQAEELRQRLRGTGVSVTRDGENVILNM---PGHVTFAFDSADLRSDFFEVLDSVAI 139 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V + +I + GHTD++ A N RLS RA + + L+ V+E R+ + GF Sbjct: 140 VANEFDQTMIEVAGHTDST---GPAEYNQRLSERRAQTVARYLVGRDVAEMRMIAV-GFG 195 Query: 317 HHRLKIASDPMNSA--NRRIDIL 337 R ++ NRR++I Sbjct: 196 EERPIASNQTEEGRQQNRRVEIT 218 >gi|330950708|gb|EGH50968.1| OmpA/MotB [Pseudomonas syringae Cit 7] Length = 260 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 83/240 (34%), Gaps = 13/240 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 TK + +L+ +N + ++ + + +D+ K L Sbjct: 21 ATKPNPNLEQARSNFTALQTNPQATQVAALETKDASEWLTKAEQAFRNDEDVQKVDQLSY 80 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N+ ++ A + ++ + + + + T G L Sbjct: 81 LTNQRIELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 ++ D +FD + + P + K+ L + + + G+TD++ A N Sbjct: 139 VTFGD----VLFDYNKAELKPTAQGDIGKLAGFLQENPDRKVIVEGYTDST---GSASYN 191 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 LS RA S L++ GV R+ + G+ + + + NRR+++ + + Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNSSNSGRAMNRRVEVTISNDN 250 >gi|310765213|gb|ADP10163.1| OmpA family protein [Erwinia sp. Ejp617] Length = 413 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 7/141 (4%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V+ ++++ + +F +S+ VL ++ + + + Sbjct: 264 LKPEIEQGLVVVRDEADRSVVTL---KGDGLFTSASTDVRGRYAEVLDRVAAAMNNVSGR 320 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I + G++D P R+ N+ LSL RA S + L + R+ G + Sbjct: 321 ILVVGYSDNVPIRSARFASNYELSLARAQSVSEQLQQHLTQPQRVKA-EGRGDSNPLAPN 379 Query: 325 DPM--NSANRRIDILVEDRQG 343 + + NRR++I + G Sbjct: 380 NSAGNRARNRRVEITLLVSPG 400 >gi|78061841|ref|YP_371749.1| hypothetical protein Bcep18194_B0991 [Burkholderia sp. 383] gi|77969726|gb|ABB11105.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 434 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 7/134 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + ++ R MF + ++ KI +A Sbjct: 301 LKDEIAAGTVSVDEDARHSAVTF---RGDAMFKPGGASVQASMNPLILKIAGEVAKVPGK 357 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 ++I G+TD P R+ N LS +RA Q+L +GV R+ + G + Sbjct: 358 VTIIGYTDNVPIRSRHFASNQVLSEERAIQVMQMLQAAGVPASRLEAV-GKGDTDPVGDN 416 Query: 325 DPM--NSANRRIDI 336 + NRR++I Sbjct: 417 RTAQGRAQNRRVEI 430 >gi|320158759|ref|YP_004191137.1| outer membrane protein ImpK/VasF, OmpA/MotB domain [Vibrio vulnificus MO6-24/O] gi|319934071|gb|ADV88934.1| outer membrane protein ImpK/VasF OmpA/MotB domain [Vibrio vulnificus MO6-24/O] Length = 442 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 7/141 (4%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + L + + + + + I+ +F+ S+ + V+ K+ Sbjct: 289 ANQIQRSLATEIEMGLLKVDALPDRVRITFQSND---LFESGSAELVAHIFPVVSKVARA 345 Query: 259 LAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + I + GHTD +P + NW LSL RA + L +G R+ G Sbjct: 346 LEATNGKILVVGHTDNNPIFTSKFPSNWHLSLARATALTDRLASAGKLSGRVIP-EGMGE 404 Query: 318 HRLKIASDPMNSA--NRRIDI 336 R ++++ NRR++I Sbjct: 405 ARPLVSNETAEGRSINRRVEI 425 >gi|224373185|ref|YP_002607557.1| OmpA/MotB [Nautilia profundicola AmH] gi|223588582|gb|ACM92318.1| OmpA/MotB [Nautilia profundicola AmH] Length = 258 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 9/218 (4%) Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ L S + + + + + +K + Sbjct: 19 TFGDLMSLLLCFFVLLLSMSTMDAKKVKEAIGSLAGALSVLEGGTQTEVSRNRIQKATPI 78 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 ++ K+S ++ G I F S+ Sbjct: 79 EKTDETAQTVNKLSQAVAEFRQFTAGGKGPAIVLEEGEEGFFIRLPADITFKPGSAQITD 138 Query: 247 E-TIVVLQKIGEVLAHSTEVI---SIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLM 300 E +++ L++I ++ I+G+TD P + DNW LS RA S ++L+ Sbjct: 139 EDSLLFLKRIALIIKEYLPKNIEIQIKGYTDNQPPPPTSPYADNWELSAARALSVLKILI 198 Query: 301 KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 K GV+ ++S + + + A+ + NRR++I Sbjct: 199 KDGVNPKQLSAAA-YGEYHPIAANATPEGRAKNRRVEI 235 >gi|153004024|ref|YP_001378349.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152027597|gb|ABS25365.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5] Length = 506 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 58/204 (28%), Gaps = 8/204 (3%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + +L G+ + + ++ + + Sbjct: 302 GGVRFALDGARPAGEPSGAPDRDRDGVADGLDACPEVPGPVELDGCPDSDADEIPDPQDR 361 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 V E I + ++ FD ++ VL I +LA Sbjct: 362 CPAEPGPPQRDGCPVAEEEPLVEIETERLSLKDAIQFDTGRDTLRSQSFPVLDAISGILA 421 Query: 261 HSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E + + GHTD N LS RA + + L G+ R+ G+ Sbjct: 422 AHPELRRVRVEGHTDDV---GTNAYNKDLSDRRARTVVRYLAGKGIVPGRLVPA-GYGEE 477 Query: 319 RLKIASDPM--NSANRRIDILVED 340 R + + NRR++ + D Sbjct: 478 RPIAPNTSALGRAKNRRVEFTIVD 501 >gi|89074695|ref|ZP_01161153.1| Putative OmpA family protein [Photobacterium sp. SKA34] gi|89049459|gb|EAR55020.1| Putative OmpA family protein [Photobacterium sp. SKA34] Length = 229 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 53/144 (36%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L G+ I++++ N F + + L + Sbjct: 89 YMDVQEAKLRKQLSSSGITVTRNGDNIVLNM---PNEITFGFDQANLNDRAMNALHNVAI 145 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V +++ G TD+ + N RLS RA + L++ GV+ +R+ G Sbjct: 146 VAKEYEKTQLNVLGFTDS---KGAESYNLRLSQVRADAVANYLIRQGVNANRVVS-QGRG 201 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 ++ + NRR++I++ Sbjct: 202 ESNPIASNSTSNGRAQNRRVEIIL 225 >gi|330815362|ref|YP_004359067.1| OmpA/MotB [Burkholderia gladioli BSR3] gi|327367755|gb|AEA59111.1| OmpA/MotB [Burkholderia gladioli BSR3] Length = 345 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 79/264 (29%), Gaps = 7/264 (2%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 T + + + +S + G + + + Sbjct: 84 TGTNVANGAGSGQATGAGTGATVSAPAPANATPGQVVAGGKVPDEATKAAVLQKLRDTYG 143 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + + + + L K+ + + I + + Sbjct: 144 AGNVVDQIEVGDVTTPPNWSANVQKLIGPQLKQISKGQLKIDGTSIDVRGEVRNEALRQQ 203 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 S + L ++ L + ++ T F+ S+ P+ +L ++ + Sbjct: 204 VASDMANQLNPTYTIRNALRVSASEQGILDQTLANRTIEFETGSATLTPQGRAILDQMAD 263 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 ++ +I GHTD N LS RA + L+ G++ +++ +G Sbjct: 264 AMSKLANRQVTIIGHTDN---SGNRATNISLSQARADAVKGYLVAKGIASQQLTT-TGVG 319 Query: 317 HHRLKIASDPM--NSANRRIDILV 338 + ++D + NRRI+ V Sbjct: 320 PDQPIASNDTADGRARNRRIEFRV 343 >gi|256840118|ref|ZP_05545627.1| outer membrane protein [Parabacteroides sp. D13] gi|256739048|gb|EEU52373.1| outer membrane protein [Parabacteroides sp. D13] Length = 226 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + +F +SS + L+ L + + I I G TD + N LS Sbjct: 105 DSGILFATNSSTLSDASKSALRNFATSLKANPDTDIRIIGFTDNT---GKVDYNQTLSEK 161 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA S Y LM GVS DR+ G H ++D NRR++I++ Q Sbjct: 162 RAKSVYDYLMMQGVSTDRMV-YEGKGIHDPVASNDTPEGRSLNRRVEIVILANQ 214 >gi|209695291|ref|YP_002263220.1| outer membrane protein A [Aliivibrio salmonicida LFI1238] gi|208009243|emb|CAQ79504.1| outer membrane protein A [Aliivibrio salmonicida LFI1238] Length = 367 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 13/134 (9%) Query: 213 KGVLFETTRTGILI------SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EV 265 + V+ + I ++ + +F S+ E I E L ++ Sbjct: 228 EVVVIAEPDPPVRIVKAEKLTLNELNGQALFGFDSAKLSSEVEAHFDSILERLKNNPTSE 287 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 +SI GHTD+ + N LSL RA S +G++ RI + G ++ Sbjct: 288 LSIVGHTDSQ---GSDKYNEGLSLRRAQSVANYFESNGIAMSRIK-VEGRGETDPVADNN 343 Query: 326 P--MNSANRRIDIL 337 S NRR+D++ Sbjct: 344 TLKGRSMNRRVDLI 357 >gi|146308665|ref|YP_001189130.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp] gi|145576866|gb|ABP86398.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 222 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV + I + + F S+ L + Sbjct: 81 DRQEAELRRQMQGTGVEVQRQGDVIQLIM---PGNITFATDSAEIASSFYAPLNNLANSF 137 Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I + GHTD++ N LS RA S L+ GV R+S G Sbjct: 138 RQYNQNSIEVVGHTDST---GSHSYNMSLSQRRAQSVASYLIAQGVDGSRVST-RGMGPD 193 Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343 + ++ + NRR+++ + G Sbjct: 194 QPVASNATAEGRAQNRRVEVTLRPLPG 220 >gi|56415540|ref|YP_152615.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|56129797|gb|AAV79303.1| putative outer membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 216 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 76 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 132 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + SG Sbjct: 133 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 188 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 189 PANPIASNSTAEGKAQNRRVEITL 212 >gi|326801229|ref|YP_004319048.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] gi|326551993|gb|ADZ80378.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] Length = 177 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 7/113 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 +F+ S + + VL +I + +I GH A N LS+ Sbjct: 69 NFKNILFEFDSGVLKTASYSVLDQIVREMKKDPSVKFTINGHAS---LEGSAEHNMALSV 125 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 DRA + L+ +G+S D ++ GF + ++ NRR++I + Sbjct: 126 DRANAVKLYLVNAGISPDNLTA-QGFGATKPVATNETEEGRSQNRRVEIKLSR 177 >gi|262199634|ref|YP_003270843.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262082981|gb|ACY18950.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 291 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 87/246 (35%), Gaps = 9/246 (3%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + E + ++++ ++ +L+ L+ ++ E K + Sbjct: 33 AQTEVLETKELEIQNLEQAIAEEEAKLKELNNQLAALKEKVRLTEEEVASMEAEKVRVEG 92 Query: 161 T-DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 LS+ KRK + + L+ + + + Sbjct: 93 ELAAVVKDRARLKSSAEELSQALSELGKRKAEAEKRVAQFRDLLNRFRSLIDAGKLKVKI 152 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR 278 T +++ + +F + + IV + +IGEVLA + I GHTD P Sbjct: 153 TDGRMILELPTD---VLFASGRADLSEDGIVSITQIGEVLAAIPDRRYQIEGHTDNVPIS 209 Query: 279 NIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 NW L+ RA + + L ++G+ +S S F R +++ NRRI+ Sbjct: 210 TARYPSNWELAAARALTVLKTLREAGMQGSTLSAAS-FGEFRPVASNNSDAGRRANRRIE 268 Query: 336 ILVEDR 341 I++ Sbjct: 269 IVIVPD 274 >gi|167571440|ref|ZP_02364314.1| ompA family protein [Burkholderia oklahomensis C6786] Length = 308 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 87/285 (30%), Gaps = 19/285 (6%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH-ITKNSVDLKIGSTNQKK 122 A+ P + A + + + G Sbjct: 27 ALADNVGPATVTPIDAGGVPVKSTPLAAPAPAAASGAGGGATVSSPPPANATPGQVVAGG 86 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTR--------DSEKGKDLCKSTDLEKSINKEENYF 174 + L + + N + + ++ K + + Sbjct: 87 KVADEATKAAVLQRLRDTYGAANVVDQIEVGDVATPPNWSANVQKLIGPQLKQISKGQLK 146 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + + + + + Q LA +++ L+ I G+ + G+L + R Sbjct: 147 IDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKNGLRVSASEQGLLDQTLANRTI 204 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ S+ P+ +L ++ LA + I GHTD N LS RA Sbjct: 205 E-FETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDN---SGNRASNIALSQARAD 260 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 + L+ G++ +++ +G + ++D + NRRI+ Sbjct: 261 AVKGYLVAKGIASQQLTT-TGVGPDQPIASNDTNDGRARNRRIEF 304 >gi|218778169|ref|YP_002429487.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759553|gb|ACL02019.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] Length = 381 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + + + ++ K VL + + I GHTD+ + N LS DRA + Sbjct: 277 FKTNKADIAKKYYPIMDKAICVLKKYPDLKVLIGGHTDSR---GPDKFNQELSQDRAQAV 333 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 ++K GV+ +R+ + GF + A+D + NRR+ + Sbjct: 334 MDYMVKKGVAPERL-SVRGFGAAKPIAANDSKEGRAQNRRVTLT 376 >gi|126214998|emb|CAM35534.1| hypothetical protein [Pseudomonas fluorescens] Length = 254 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 75/238 (31%), Gaps = 11/238 (4%) Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 + + + + L+ + + + D + + + Sbjct: 16 STPPNANLENARTNFSSLQTNPQATKLAALETKDASEWLDKADKAYRDKEDEKKVDQLAY 75 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + + + + + K D + + + + T G L++ Sbjct: 76 LTNQRVEVAKDTIVLRESEAKLKNAGDERARALLDARDAQIKQLQDSLNAKQTDRGTLVT 135 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 D +F + S +V + K+ + L + + + G+TD++ N Sbjct: 136 FGD----VLFATNKSDLKSSGLVNITKLAQFLRDNPDRKVIVEGYTDST---GSDSYNQS 188 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 LS RA S + L + GV RI G+ + + NRR+++ + + Sbjct: 189 LSERRAASVQRALAQQGVDISRIVT-QGYGKEYPVADNGSVSGRAMNRRVEVTISNDN 245 >gi|113867012|ref|YP_725501.1| outer membrane protein and related peptidoglycan-associated (lipo)proteins [Ralstonia eutropha H16] gi|113525788|emb|CAJ92133.1| outer membrane protein and related peptidoglycan-associated (lipo)proteins [Ralstonia eutropha H16] Length = 308 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + +L + + VLAH + + GHTD++ N LS RA + Sbjct: 207 FETDSDVLSAAARPLLDRAAKAVLAHPDWRLRVEGHTDST---GGDARNQPLSERRAAAV 263 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 + L +GV DR+ G+ +++D + NRR+++ Sbjct: 264 RRYLESAGVPADRLDA-KGYGATHPLMSNDTPFGRAQNRRVEL 305 >gi|218550833|ref|YP_002384624.1| outer membrane lipoprotein [Escherichia fergusonii ATCC 35469] gi|218358374|emb|CAQ91021.1| putative outer membrane lipoprotien [Escherichia fergusonii ATCC 35469] gi|324111886|gb|EGC05866.1| OmpA family protein [Escherichia fergusonii B253] gi|325499107|gb|EGC96966.1| outer membrane lipoprotein [Escherichia fergusonii ECD227] Length = 219 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD +S+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSNSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV+ +RI+ G Sbjct: 137 VLKEYPKTAVNVLGYTDST---GGYDLNMRLSQQRADSVASALITQGVAANRINT-RGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|238918002|ref|YP_002931516.1| outer membrane lipoprotein [Edwardsiella ictaluri 93-146] gi|238867570|gb|ACR67281.1| inner membrane lipoprotein YiaD [Edwardsiella ictaluri 93-146] Length = 219 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD +SS P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDSNSSNLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GVS RI I G Sbjct: 137 VLKEYQKTAVNVVGYTDST---GSRDLNMRLSQQRADSVASALIVQGVSAGRIRTI-GMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 + + NRR++I + Sbjct: 193 PANPIATNSTAAGKAQNRRVEITL 216 >gi|317491523|ref|ZP_07949959.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316921070|gb|EFV42393.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 564 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 6/131 (4%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDA 274 E ++ + + +FD +S+ + VL + + + GHTDA Sbjct: 426 KVEQKAKVVIPKAVRLDSLSLFDTNSAKLKSGSTKVLVTALVDIKAQPGWLIVIAGHTDA 485 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332 + A+ N LS RA + + G + G+ + +++ +ANR Sbjct: 486 T---GNAQRNLALSQARAEAVRDWMRSMGDIPVTCFAVQGYGASQPIASNETDAGRAANR 542 Query: 333 RIDILVEDRQG 343 R+DI + G Sbjct: 543 RVDIRLVPEAG 553 >gi|325954863|ref|YP_004238523.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] gi|323437481|gb|ADX67945.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] Length = 500 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 78/281 (27%), Gaps = 17/281 (6%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 +F K D P+ D I + + + + Sbjct: 209 DFFQHTVGVTFRFGKQDRDGDGIPDEEDACPDDFGIATDDPLTNGCP---DRDGDGVFDK 265 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + ++ + + + + +++ +K Sbjct: 266 DDACPDVPGLAEFNGCPDTDGDGIPDNEDECPEVAGPKENNGCPWPDTDGDGVLDKDDEC 325 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGV----LFETTRTGILISIIDQRNTPMFDKSSS 242 L + + G+ + + + + + +F+ +S Sbjct: 326 PTVPGLAEFNGCPDTDGDGIPDKDDACPTVKGPKENNGCPWTEVEVAKRLSNILFEYNSD 385 Query: 243 IPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 +P + ++ ++L I GH D N LSL RA + +L Sbjct: 386 KIVPSSYEDVRIAAQILNSEDLLANSYYIDGHADQR---GRDAYNKALSLKRAQALVNIL 442 Query: 300 MKSG-VSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 ++ G V R++ G +L + NRR+++L Sbjct: 443 VERGNVDRKRLTA-RGLGKTQLLCTENTEECYQRNRRVEVL 482 >gi|296101897|ref|YP_003612043.1| type VI secretion system protein ImpK [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056356|gb|ADF61094.1| type VI secretion system protein ImpK [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 412 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 71/179 (39%), Gaps = 8/179 (4%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + N L + + ++ ++ + L ++ L + V + Sbjct: 222 NWRLGDNTNPVLAKIYQSQLPETTIQQPARQLPAVLN-LRGFLKPEIDAGLVAVKDEADR 280 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR- 282 ++ + + +F +S++ V+ +I + + + + I + G++D P R+ Sbjct: 281 SVVIL---KGDGLFASASTVVRDRYEPVINRIAQAMNNVSGKILVVGYSDNVPIRSARFA 337 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 N+ LSLDRA S ++L S DR+ G ++ + NRR++I + Sbjct: 338 SNYELSLDRARSVQKMLQGSLSQPDRVKA-EGRGEINPVAPNNTPENRARNRRVEITLL 395 >gi|170751735|ref|YP_001757995.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170658257|gb|ACB27312.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831] Length = 337 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 85/247 (34%), Gaps = 21/247 (8%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 + + + + Q + + + + + + ++ ++ Sbjct: 92 VEAERDRAKVQAEAATVSQGAAGTLDKQLETERGATRRAQSQIDLLNEQISAMRRQLAAL 151 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR-- 232 L+ + + + R+ +L +++ L+ V + F IL + D R Sbjct: 152 EDALAASESRDRESQARIAELGSRLNVALAQKVQELARYRSNFFGRLRQILGNRPDIRVV 211 Query: 233 -------NTPMFDKSSSIPLPETIVVLQKI--------GEVLAHSTEVISIRGHTDASPF 277 + +F S+ PE L +I ++ A V+ + GHTDA P Sbjct: 212 GDRFVLQSEVLFPAGSATLKPEAGPELDRIAGAVSELAKQIPADLPWVLRVDGHTDARPI 271 Query: 278 RNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334 NW LS RA + Q L G+ + + F + A + NRRI Sbjct: 272 STSQFPSNWSLSAARAIAVVQFLAGKGIPPQHLLAGA-FGEFQPLEAGATEEAYARNRRI 330 Query: 335 DILVEDR 341 ++ + +R Sbjct: 331 EMKLTER 337 >gi|197116786|ref|YP_002137213.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem] gi|197086146|gb|ACH37417.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem] Length = 459 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + PE + +G+ + ++ GHTD + N LS RA + Sbjct: 228 FDIDKAEIRPEYRDEVATVGKFMKQYPTTTAVIEGHTDNV---GDPQYNLDLSKRRAQAV 284 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ + G+ R+ GF R ++ NRRI+ +++ Sbjct: 285 VDYLVDNYGIERSRLEA-RGFGMARPIATNNTDEGRQANRRIEAIID 330 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 85/235 (36%), Gaps = 12/235 (5%) Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 L+ K + + + ++ + + +L+ S + + Sbjct: 224 LQGEFDIDKAEIRPEYRDEVATVGKFMKQYPTTTAVIEGHTDNVGDPQYNLDLSKRRAQA 283 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL-ISIIDQ 231 + I + + R +A+ I++ + + + + D+ Sbjct: 284 VVDYLVDNYGIERSRLEARGFGMARPIATNNTDEGRQANRRIEAIIDCAFDVKEVQPPDR 343 Query: 232 RNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRL 287 + FD + P+ + K+GE + ++ GHTD + N +L Sbjct: 344 LCMTLLLEFDSGKADIKPQYRDEMAKVGEYMNKYPTTTAVIEGHTDNV---GGSDYNMKL 400 Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 S RA +A Q L+++ G+ + R+S G+ + R + + NRRI+ +++ Sbjct: 401 SQRRAENAVQYLVQNFGIDKSRLSA-KGYGYTRRIAYNSTPEGRAKNRRINAVID 454 >gi|28868712|ref|NP_791331.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213969090|ref|ZP_03397229.1| ompA family protein [Pseudomonas syringae pv. tomato T1] gi|301384017|ref|ZP_07232435.1| ompA family protein [Pseudomonas syringae pv. tomato Max13] gi|302058723|ref|ZP_07250264.1| ompA family protein [Pseudomonas syringae pv. tomato K40] gi|302131685|ref|ZP_07257675.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851951|gb|AAO55026.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213926088|gb|EEB59644.1| ompA family protein [Pseudomonas syringae pv. tomato T1] gi|331016335|gb|EGH96391.1| ompA family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 260 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 84/240 (35%), Gaps = 13/240 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 TK + +L+ +N E+ ++ + + D+ K L Sbjct: 21 ATKPNPNLEQARSNFTALQTNPESTKVAALETKDASEWLAKAEQAFRNDDDVKKVDQLSY 80 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N+ ++ A + ++ + + + + T G L Sbjct: 81 LTNQRVELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 ++ D +FD + + P + K+ L +T+ + G+TD++ A N Sbjct: 139 VTFGD----VLFDYNKAELKPTAQGDIGKLAAFLQENTDRKVIVEGYTDST---GSASYN 191 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 LS RA S L++ GV R+ + G+ + + + NRR+++ + + Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNSSNSGRAMNRRVEVTISNDN 250 >gi|227873496|ref|ZP_03991745.1| OmpA family membrane protein [Oribacterium sinus F0268] gi|227840670|gb|EEJ51051.1| OmpA family membrane protein [Oribacterium sinus F0268] Length = 414 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 85/264 (32%), Gaps = 24/264 (9%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + + + +++ + + + D+ + G+ + + + S S Sbjct: 169 GSGQYVDEQKGITLQVNSDGTGQYSDDGQGITLQVSEGGNGIFTDTKKEITMMVSDDSTS 228 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + D ++ K+ + + ++ + A +K + Sbjct: 229 YTQGSIDIDVKPDGSGSYYNSETGLSIKNDGQGKAVISLGNDEKTVDARPLEKPTKLPKL 288 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L A++++ + + +FD P+ +L + Sbjct: 289 SMVPAVPSLEANSLLITL----------------DSGVLFDVDKYDIRPDAEKILNDLAT 332 Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL I GHTD+ N LS +RA S L GV+ + G+ Sbjct: 333 VLKEGGITAFQIDGHTDSMD---TDEHNQVLSENRANSVKSYLASQGVTAE--ITTHGYG 387 Query: 317 HHRLKIASDPMNSA--NRRIDILV 338 R +D NRR++I+V Sbjct: 388 ESRPVATNDTAEGRQQNRRVEIIV 411 >gi|153807056|ref|ZP_01959724.1| hypothetical protein BACCAC_01333 [Bacteroides caccae ATCC 43185] gi|149130176|gb|EDM21386.1| hypothetical protein BACCAC_01333 [Bacteroides caccae ATCC 43185] Length = 278 Score = 99.7 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 20/217 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195 Q +L RD+ K + + ++N E L L +K + ++R + +L Sbjct: 49 GNQMSVQIKNLMRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLNQKKNELNERERTINEL 108 Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + I++ + + + + +++ D+ +F S+ Sbjct: 109 QQMINAQNEKVRKLLSSVKDALLGFSSDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302 L K+ EVL T++ I GHTD P +DNW LS+ RA S ++L+K+ Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 V+ +I + SG + ++ NRR +I+ Sbjct: 226 NVNPLQI-QPSGRGEYMPVDDNETAEGRSKNRRTEII 261 >gi|154490982|ref|ZP_02030923.1| hypothetical protein PARMER_00899 [Parabacteroides merdae ATCC 43184] gi|154088730|gb|EDN87774.1| hypothetical protein PARMER_00899 [Parabacteroides merdae ATCC 43184] Length = 278 Score = 99.7 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 20/208 (9%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDLAKKISST-- 202 SL RD+ + ++ + N E L L +K+ + ++R + +L I++ Sbjct: 61 SLERDTTRMGKNIRNYQSMLNTNMTEQEKLNSLLSQKMNELDERERTINELQDMINAQTE 120 Query: 203 --------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + + + +++ D+ +F+ S+ L K Sbjct: 121 RVQNLLNSVKDALLGFSSDELTVREKDGKVYVAMSDKL---LFESGSARVDKRGKEALAK 177 Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK-SGVSEDRISK 311 + EVL +++ I GHTD+ P DNW LS+ RA S ++L K GV +I Sbjct: 178 LAEVLNKQSDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVKPLQIQP 237 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDIL 337 G ++ + NRR +I+ Sbjct: 238 C-GRGEFMPVADNETADGRAKNRRTEII 264 >gi|320182069|gb|EFW56974.1| Outer membrane protein A precursor [Shigella boydii ATCC 9905] Length = 219 Score = 99.7 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|171316577|ref|ZP_02905793.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] gi|171098305|gb|EDT43111.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] Length = 316 Score = 99.7 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 79/248 (31%), Gaps = 18/248 (7%) Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR--------DSEK 153 I + G + L + + N + + Sbjct: 74 TAGTIAPPPANATPGQVVAGGKVPDEATKAAVLQKLRDTYGAANVVDQIEVGDVATPPNW 133 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 ++ K + + + E + + + Q LA +++TL+ I Sbjct: 134 SANVQKLLGAQLKQISKGQLKINGTQIEMKGEVHNEAQRQQLASDMANTLNPTYT--IKN 191 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272 G+ + G+L + R F+ S+ P+ +L ++ L+ I GHT Sbjct: 192 GLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRQILDQMAAALSKLQNRTVDIIGHT 250 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330 D N LS RA + L+ + +++ +G + +D + Sbjct: 251 DN---SGNRTSNIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQPIAPNDTAEGRAR 306 Query: 331 NRRIDILV 338 NRRI+ V Sbjct: 307 NRRIEFRV 314 >gi|149922653|ref|ZP_01911080.1| flagellar motor protein [Plesiocystis pacifica SIR-1] gi|149816450|gb|EDM75949.1| flagellar motor protein [Plesiocystis pacifica SIR-1] Length = 279 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 92/231 (39%), Gaps = 8/231 (3%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 + + + + +Q L + + + E + ++ L Sbjct: 32 TAARAESKDLSVALQEAETAAQLLGANIADLEDQLRTAEVRAQEAETELAGVLKDKSNLS 91 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNT 234 +E A+ +RL+ A+ + + + V + + T + I+ +++ R Sbjct: 92 ASVEEMQQALAELQRLRAAAE-VRAGMYRSVLNKFKTLIDNGTLKAKIVDGRMVLELRTD 150 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRA 292 +FD + E + ++G++LA ++ + GHTD P + A NW L+ RA Sbjct: 151 ILFDSGKAKLSDEGAATVGEVGKLLAELSDRRFQVEGHTDNVPIKTKAFPSNWELASARA 210 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 + ++ +G+ IS + +A R ++ D + NRRI+I++ Sbjct: 211 ITVVNEMIAAGMPATNISAAA-YADTRPAASNATDEGRAQNRRIEIVLIPD 260 >gi|150024175|ref|YP_001295001.1| flagellar motor/chemotaxis (MotB)-related protein [Flavobacterium psychrophilum JIP02/86] gi|149770716|emb|CAL42180.1| Flagellar motor/Chemotaxis (MotB)-related protein [Flavobacterium psychrophilum JIP02/86] Length = 320 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 105/304 (34%), Gaps = 16/304 (5%) Query: 51 MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110 + +++ T K I L + DE + + + + Sbjct: 9 LLVLSLTTSCVSKKIFADLETKFAELKKERNALSDENETLKTTKNQFQLDNATLKTELDK 68 Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 + + S + ++ SL + +K +DL + ++ Sbjct: 69 LKAERDKLAADYAASSNNLKTLQSSYNALEKNSDESLKANMDKNRDLLAQLEAKEKALAA 128 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDL-------AKKISSTLSGLVADNIVKGVLFETTRTG 223 E L LS + R L+ L KK+ TLS + KG+ + Sbjct: 129 EKGRLAKLSGDLKDRSDRVNELEALIAAKEASMKKLKETLSKSLKAFEGKGLTVQQKDGK 188 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA- 281 + +S+ N +F+ S E + + +VL + ++ I GHTD F Sbjct: 189 VYVSM---ENKLLFESGSWAVGTEGKKAVVAVAKVLGDNPDISILIEGHTDNDKFAGAVG 245 Query: 282 --RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 +NW LS RA S +L ++ + +G +++D + NRRI+I+ Sbjct: 246 QIENNWDLSTKRATSIVNILGENPKVNKQNLTAAGRGEFSPLMSNDTPEGKAKNRRIEII 305 Query: 338 VEDR 341 + + Sbjct: 306 LTPK 309 >gi|299822262|ref|ZP_07054148.1| chemotaxis protein MotB [Listeria grayi DSM 20601] gi|299815791|gb|EFI83029.1| chemotaxis protein MotB [Listeria grayi DSM 20601] Length = 265 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 86/232 (37%), Gaps = 19/232 (8%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 S + KK Q + + ++D S D + ++ Sbjct: 37 TSSIDAKKFEQMGNAFKKIVDEGAAGNQAHVAKSKDPTNI-----SADAIEKAMAAQDKQ 91 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + +K L + K +L+ KK+ S +S +++ + G+LI+I D Sbjct: 92 KSAAASKKALEKQNKMQLEAFKKKLDSYIS---TEHLEAKLSTRYANDGLLITIRDD--- 145 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNI-ARDNWRLSLDR 291 +FD S+ + ++IG + S I GHTD P + NW LS R Sbjct: 146 ILFDSGSAELSASKRKIAKEIGMLFKQGDSKMEGIISGHTDDVPIHTATYKSNWELSAAR 205 Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 A + + ++ + + G+ ++ +D NRR++I+V Sbjct: 206 AVNFMEAIITENTSLDPG-LFSARGYGEYKPVAKNDNAVDREKNRRVEIMVR 256 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 43/107 (40%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + SW + Y+D +T+L+A F+V++ ++ D + + F Sbjct: 2 RRRKKHSEEHVDESWLLPYSDLLTLLLALFIVLFATSSIDAKKFEQMGNAFKKIVDEGAA 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 ++ + P S + I+ ++ + S + ++ + Q Sbjct: 62 GNQAHVAKSKDPTNISADAIEKAMAAQDKQKSAAASKKALEKQNKMQ 108 >gi|262403402|ref|ZP_06079961.1| outer membrane protein A precursor [Vibrio sp. RC586] gi|262350394|gb|EEY99528.1| outer membrane protein A precursor [Vibrio sp. RC586] Length = 332 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 54/146 (36%), Gaps = 7/146 (4%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + ++ + + + + +F S P E I L +I Sbjct: 184 QPALVEAAPTSIIEDTPVKETVTVKTPPQIQTFLPKTTVGLFGFDSVEPSQEFIDQLTEI 243 Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 VL + + GHTD++ A N +S RA + L++ GV+ ++ + G Sbjct: 244 SSVLISYPQAQAKVVGHTDST---GSALYNQNISEHRAQAVVNKLIELGVTPTQL-EWRG 299 Query: 315 FAHHRLKIASDPMNSA--NRRIDILV 338 + ++ NRR++I + Sbjct: 300 EGEFQPVADNNTAEGRAANRRVEITI 325 >gi|167909987|ref|ZP_02497078.1| ompA family protein [Burkholderia pseudomallei 112] gi|254199385|ref|ZP_04905751.1| OmpA family protein [Burkholderia mallei FMH] gi|254205699|ref|ZP_04912051.1| OmpA family protein [Burkholderia mallei JHU] gi|147748981|gb|EDK56055.1| OmpA family protein [Burkholderia mallei FMH] gi|147753142|gb|EDK60207.1| OmpA family protein [Burkholderia mallei JHU] Length = 207 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F P +L + L + ++ S+ G+TD++ A N LS + Sbjct: 95 PSSVTFATDQYAITPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 151 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + GV+ +R+S G + + NRR++I + Q Sbjct: 152 RAQSVVNALAQRGVAANRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 204 >gi|304397299|ref|ZP_07379178.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB] gi|304355448|gb|EFM19816.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB] Length = 412 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 56/137 (40%), Gaps = 7/137 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V ++++ + +F +++ + V+Q+I + + + Sbjct: 263 LKPEIDAGLVAVRDEADRSVVTL---KGDGLFASAATDVRGRYVDVIQRIAAAMNNVSGQ 319 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I + G++D P R+ N+ LSL RA S +L + R+ G + + Sbjct: 320 IQVIGYSDNVPIRSARFGSNFELSLARARSVQSLLQQQLADPSRVKA-EGRGESNPLVPN 378 Query: 325 DPM--NSANRRIDILVE 339 + + NRR++I + Sbjct: 379 NSAENRARNRRVEITLL 395 >gi|319764890|ref|YP_004128827.1| ompa/motb domain protein [Alicycliphilus denitrificans BC] gi|330827094|ref|YP_004390397.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans K601] gi|317119451|gb|ADV01940.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC] gi|329312466|gb|AEB86881.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601] Length = 214 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 7/117 (5%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D + F + S P +L + E L ++ + I GHTD++ N LS Sbjct: 102 DIPSDISFATNRSDIQPSFRPILDRFAEGLRNNPNAEVRIIGHTDST---GNDAINDPLS 158 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 LDRA S L GVS RI + G ++D + NRR++I + +RQG Sbjct: 159 LDRATSTRNYLTARGVSGARIH-VDGRGSREPIASNDTAEGRARNRRVEIFMGERQG 214 >gi|171319661|ref|ZP_02908754.1| type VI secretion system OmpA/MotB family protein [Burkholderia ambifaria MEX-5] gi|171095114|gb|EDT40122.1| type VI secretion system OmpA/MotB family protein [Burkholderia ambifaria MEX-5] Length = 411 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 7/134 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + ++ R MF + ++ KI +A Sbjct: 278 LQDEIAAGTVSVDEDARHSAVTF---RGDAMFKPGGASVQASMNPLISKIAAEIAKVPGK 334 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 ++I G+TD P R+ N LS +RA Q+L +GV +R+ + G + Sbjct: 335 VTIIGYTDNVPIRSRHFASNQMLSEERATQVMQMLQTAGVPANRLEAV-GKGDADPVGDN 393 Query: 325 DPM--NSANRRIDI 336 + NRR++I Sbjct: 394 RTAQGRAQNRRVEI 407 >gi|300770791|ref|ZP_07080669.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861] gi|300762348|gb|EFK59166.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 440 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 69/218 (31%), Gaps = 14/218 (6%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + S S + + K + E + L Sbjct: 226 LGSPSKPALSNSNPVATLVNDYTAKYDQLKAEREALVAANNALKSQVDQLNSDLKDDDGD 285 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSS 242 + + K +T SG D + T+ I + ++ + FD S Sbjct: 286 GVANKYDKCPNTPSGTKVDGSGCPLPVAETKVVEKIVVTEEDRKVVDEAIKNLEFDLGKS 345 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + L ++ +L + + GHTD + + N RLS +RA + L Sbjct: 346 TIRSTSYPSLDRVASLLIEKNFSLKLAGHTDNT---GSMKTNLRLSKERAEAVKAYLSGK 402 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 G + RI +G+ ++ ++ NRR++ + Sbjct: 403 GANPSRIEA-TGYGPNQPIASNATAEGRQQNRRVEFTL 439 >gi|227538391|ref|ZP_03968440.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227241773|gb|EEI91788.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 440 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 69/218 (31%), Gaps = 14/218 (6%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + S S + + K + E + L Sbjct: 226 LGSPSKPALSNSNPVATLVNDYTAKYDQLKAEREALVAANNALKSQVDQLNSDLKDDDGD 285 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSS 242 + + K +T SG D + T+ I + ++ + FD S Sbjct: 286 GVANKYDKCPNTPSGTKVDGSGCPLPVAETKVVEKIVVTEEDRKVVDEAIKNLEFDLGKS 345 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + L ++ +L + + GHTD + + N RLS +RA + L Sbjct: 346 TIRSTSYPSLDRVASLLIEKNFSLKLAGHTDNT---GSMKTNLRLSKERAEAVKAYLSGK 402 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 G + RI +G+ ++ ++ NRR++ + Sbjct: 403 GANPSRIEA-TGYGPNQPIASNATAEGRQQNRRVEFTL 439 >gi|157371239|ref|YP_001479228.1| hypothetical protein Spro_2999 [Serratia proteamaculans 568] gi|157323003|gb|ABV42100.1| OmpA/MotB domain protein [Serratia proteamaculans 568] Length = 406 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 6/140 (4%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L + I +G++ + I+ + +FD +++ I V+ +I + Sbjct: 251 LKSFLRKEIAEGLVVVRDEAQQSVVIL--KGDGLFDSAATTVRGNYIPVIDRIAAAMNGV 308 Query: 263 TEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 + I + G++D P R+ NW LSL RA + L K + R+ G Sbjct: 309 SGKILVTGYSDNLPIRSARFASNWELSLARADAVSAQLQKHLDNPQRVKA-EGRGESNPV 367 Query: 322 IASDP--MNSANRRIDILVE 339 ++ + NRR++I + Sbjct: 368 APNNSKVNRALNRRVEITLL 387 >gi|253771615|ref|YP_003034446.1| outer membrane lipoprotein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163475|ref|YP_003046583.1| putative outer membrane lipoprotein [Escherichia coli B str. REL606] gi|297520666|ref|ZP_06939052.1| putative outer membrane lipoprotein [Escherichia coli OP50] gi|300928223|ref|ZP_07143762.1| OmpA family protein [Escherichia coli MS 187-1] gi|242379069|emb|CAQ33870.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)] gi|253322659|gb|ACT27261.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975376|gb|ACT41047.1| predicted outer membrane lipoprotein [Escherichia coli B str. REL606] gi|253979532|gb|ACT45202.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)] gi|300463768|gb|EFK27261.1| OmpA family protein [Escherichia coli MS 187-1] Length = 219 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|305665009|ref|YP_003861296.1| OmpA/MotB protein [Maribacter sp. HTCC2170] gi|88707423|gb|EAQ99668.1| OmpA/MotB [Maribacter sp. HTCC2170] Length = 404 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 9/145 (6%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVL- 259 L + V+ LI + + +F L + L ++ +L Sbjct: 261 LESAEPADFVQNPTAIRNNDRNLIVLNETHLFENVLFHFDKYDLLGQAKNELDRVYRILE 320 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 S+ ISI GHTD+ N LS RA S ++ G+S +RI +G Sbjct: 321 NDSSLSISIYGHTDSV---GAESYNLELSKLRAKSVANYFVELGLSSNRIKS-TGKGSSE 376 Query: 320 LKIASDPMNSA--NRRIDILVEDRQ 342 ++ N NRR++ ++ +++ Sbjct: 377 PIASNASENGRKMNRRVEFVLSNKK 401 >gi|320106074|ref|YP_004181664.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4] gi|319924595|gb|ADV81670.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4] Length = 524 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 35/279 (12%), Positives = 98/279 (35%), Gaps = 16/279 (5%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 ++ P + + D+ + ++ + E + + + + + Sbjct: 247 ADHYAPDIMAQVRTNLKNADDMDGSKKRDEKMEITYAREAVQRAEDARLSSIRKRIAEER 306 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + E + + +Q + + + K ++ + + + + Sbjct: 307 QAEVDARQTAEAQAQQSAMAAQQSQLDAAKAQAEAERSAAAKAQADAQRAQAEAAAANAN 366 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + + K L + D + + + T G+++S+ D +FD Sbjct: 367 ASADAAREAVVK-----LRQQMRDQLNSILATKETPRGLVVSLSD----VLFDTGKYTLK 417 Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 +T + L K+ ++A + + + G+TD+ N +LS +RA S L+ + V Sbjct: 418 GDTKISLAKVAVIVASHPDLKLQVEGYTDSV---GSDDLNQKLSENRANSVKAFLIANSV 474 Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + I+ + G+ + + NRR+++++ Sbjct: 475 NPGNITSL-GYGKSHPVADNGTSAGRAQNRRVELVISGP 512 >gi|238782805|ref|ZP_04626834.1| Flagellar motor protein [Yersinia bercovieri ATCC 43970] gi|238716228|gb|EEQ08211.1| Flagellar motor protein [Yersinia bercovieri ATCC 43970] Length = 296 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 3/197 (1%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 E+ ++ + + K+ K+ LQ +K+ + Sbjct: 38 AQGERVSLSDSPIPGGGDDFAKQEGEVFRQTLNKLDERKQSLNLQRAHQKLKDLIKNDPR 97 Query: 209 -DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 N + T G+LI +ID + PMF S P +LQ + VL IS Sbjct: 98 LSNYKSNLRLSLTEDGLLIQVIDSQERPMFKVGSKELEPYMRGILQALVPVLNDLPNKIS 157 Query: 268 IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 + GHTD+ P+ NW LS DRA ++ Q L+ G++E++ ++ G A+ Sbjct: 158 LTGHTDSLPYARGEVGYSNWELSADRANASRQTLVAGGLAENKFLRVIGTANMMNLENVR 217 Query: 326 PMNSANRRIDILVEDRQ 342 P + NRRI ILV + Sbjct: 218 PDDPINRRISILVLSKN 234 >gi|206977733|ref|ZP_03238624.1| chemotaxis protein MotB [Bacillus cereus H3081.97] gi|217961995|ref|YP_002340565.1| flagellar motor protein MotB [Bacillus cereus AH187] gi|222097978|ref|YP_002532035.1| flagellar motor protein motb [Bacillus cereus Q1] gi|206744034|gb|EDZ55450.1| chemotaxis protein MotB [Bacillus cereus H3081.97] gi|217067135|gb|ACJ81385.1| chemotaxis protein MotB [Bacillus cereus AH187] gi|221242036|gb|ACM14746.1| chemotaxis motB protein (Motility protein B) [Bacillus cereus Q1] gi|324328404|gb|ADY23664.1| flagellar motor protein MotB [Bacillus thuringiensis serovar finitimus YBT-020] Length = 261 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 82/207 (39%), Gaps = 9/207 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +Q S K+ + K+ A +++ + +L Sbjct: 52 KQMAVAFRSELAGGTGNKEFLSDQKPNDEKELSASSLESEKIKKNAEAEVKQQEMNELKA 111 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + + T G+ ++I++ +FD + E++ + +++ Sbjct: 112 VQKGIDKYIEENRLSSSFKTDLTEKGLKVTILEN---VLFDSGKADVKLESLSIAKEMSN 168 Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314 +L + S I++ GHTD P N NW LS RA + QVL+++ + + S + G Sbjct: 169 LLVSASPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPGKFSAV-G 227 Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339 + +R +D + NRR+++ + Sbjct: 228 YGEYRSIAPNDTQEGKAKNRRVEVFIL 254 >gi|238751686|ref|ZP_04613175.1| hypothetical protein yrohd0001_18130 [Yersinia rohdei ATCC 43380] gi|238710096|gb|EEQ02325.1| hypothetical protein yrohd0001_18130 [Yersinia rohdei ATCC 43380] Length = 575 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD S + VL + I + GHTD ++ N LSL Sbjct: 440 DSLSLFDVGQSTLKSGSTKVLINALVGIKAKPGWLIVVAGHTD---ITGESKSNQILSLK 496 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA S + +G + + G+ R +D + NRR++I + Sbjct: 497 RAESVRNWMRDTGDIPESCFAVQGYGQSRPLKPNDTETGRALNRRVEISL 546 >gi|90021170|ref|YP_526997.1| hypothetical protein Sde_1523 [Saccharophagus degradans 2-40] gi|89950770|gb|ABD80785.1| OmpA/MotB [Saccharophagus degradans 2-40] Length = 469 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 54/146 (36%), Gaps = 7/146 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + L + + + T I + +Q +F + P +L KI + L Sbjct: 319 ELRALLTPEIDRGILSVQDYPTHTSIVLHNQE---LFTSGNINITPSFEPILDKIAKALE 375 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 I + GHTD R NW LSL RA + L S + R+ G + Sbjct: 376 AIPGRIIVSGHTDNESIRTPRYPSNWHLSLARASEVVKYLAASADLKSRLLP-EGRGANE 434 Query: 320 LKIASDPMNSA--NRRIDILVEDRQG 343 +++D NRR+ I V QG Sbjct: 435 PIMSNDTAAGRAHNRRVVIDVYYHQG 460 >gi|4530367|gb|AAD22006.1| major outer membrane protein [Pseudomonas fluorescens] Length = 344 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 8/131 (6%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272 V + + ++ FD S+ + ++ + + + ++ GHT Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKENSYGDIKNLADFMKQYPSTSTTVEGHT 274 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA- 330 D+ N +LS RA + QVL GV R+ + G+ R + Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVADNATDAGRA 330 Query: 331 -NRRIDILVED 340 NRR++ VE Sbjct: 331 VNRRVEAQVEA 341 >gi|238799328|ref|ZP_04642769.1| hypothetical protein ymoll0001_24410 [Yersinia mollaretii ATCC 43969] gi|238716817|gb|EEQ08692.1| hypothetical protein ymoll0001_24410 [Yersinia mollaretii ATCC 43969] Length = 574 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD S + VL + I + GHTD ++ N LSL Sbjct: 439 DSLSLFDVGKSELKSGSTKVLINALVGIKAKPGWLIVVAGHTD---ITGDSQSNQILSLK 495 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S + +G + + G+ R ++D NRR++I + Sbjct: 496 RAESVRNWMRDTGDIPESCFAVQGYGQSRPLKSNDTEAGRALNRRVEISL 545 >gi|261341826|ref|ZP_05969684.1| hypothetical protein ENTCAN_08313 [Enterobacter cancerogenus ATCC 35316] gi|288316202|gb|EFC55140.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316] Length = 220 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMQGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL ++ +++ G+TD++ N RLS RA S L+ GV+ +RI + SG Sbjct: 137 VLKEYSKTAVNVIGYTDST---GSQDLNMRLSQQRADSVASALITQGVAANRI-RTSGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|327480138|gb|AEA83448.1| outer membrane protein [Pseudomonas stutzeri DSM 4166] Length = 200 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + ++ +Q + + + + ++ GHTD+ N RLS RA + Sbjct: 95 FDFDRDVVKQDSYSDIQNLADFMKEYRQTTTVLEGHTDSV---GTDAYNQRLSERRANAV 151 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +VL+ GV +R++ + G+ R + NRR++ VE R Sbjct: 152 RRVLVDELGVEGNRVNAV-GYGESRPVADNSTEEGRAINRRVEAEVEARP 200 >gi|323498434|ref|ZP_08103430.1| outer membrane protein OmpA [Vibrio sinaloensis DSM 21326] gi|323316507|gb|EGA69522.1| outer membrane protein OmpA [Vibrio sinaloensis DSM 21326] Length = 322 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q T F +S+ PE+ L K+ + L + + + G+TD A N +S Sbjct: 207 QLGTGSFKLNSTELNPESASQLDKLVDFLNTYPQATVEVIGYTDT---SGAASYNQMISE 263 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S L GV RIS G + ++ NRR++++V Sbjct: 264 KRAQSVAAALEAKGVDASRISA-KGEGENDPIASNATREGREMNRRVEVIV 313 >gi|284039490|ref|YP_003389420.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283818783|gb|ADB40621.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 361 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + F++SS I +PE+ L+K+ + + I + GHTD R N LS +R Sbjct: 256 HQVQFEQSSYILVPESSAELEKLVRAMKENPLRSIDVSGHTDNV---GDPRLNLALSENR 312 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 A L + G+++DRI+ I G+ R ++ + NRR++I + Sbjct: 313 AKVVASYLKRRGIADDRITTI-GYGGTRPIGNNNTEGERAKNRRVEITIR 361 >gi|330502930|ref|YP_004379799.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] gi|328917216|gb|AEB58047.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] Length = 267 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 92/251 (36%), Gaps = 12/251 (4%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 + ++ + + + + + ++ I + ++E + + Sbjct: 19 SNQPAGEQALEEARLSFQSVKEDPNVLRAAPKDVIRAGESLARAERLSSYWGSGDDVRHY 78 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGV 215 S + + + L K+ +++ +L K+ S + + + Sbjct: 79 AYLSQRYAEIARQHSDISLNHERAAKLELERQRLQLTLREAKLLSVQQHNGWLEEQMVSL 138 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDA 274 T G+++++ D +FD + P + K+ + L + + I G+TD Sbjct: 139 ATSETERGLVMTLGDM----LFDAGRADLQPAANRTVLKLVQFLQINPQRRVRIEGYTDN 194 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 + A +N LS RA + +L+ GV RI ++ G+ + + NR Sbjct: 195 T---GDAAENLELSRARAQAVADLLVDLGVDAKRI-QVVGYGVDFPVAENASARGRAQNR 250 Query: 333 RIDILVEDRQG 343 R++I+ D +G Sbjct: 251 RVEIVFSDERG 261 >gi|255530097|ref|YP_003090469.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366] gi|255343081|gb|ACU02407.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366] Length = 263 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 10/138 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 N + GI++ + +F S + ++ + L Sbjct: 118 QAAEIQNAIPNAEVIREGEGIIVKF---DSGILFGFDKSDLTAQAKTNIKSLAGSLNQYP 174 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I + GHTD + N LS RA + + GV R+ I G Sbjct: 175 GTDIKVIGHTDN---KGTEAYNMGLSERRAAAVKAYAVSQGVPSSRLITI-GKGFSEPIE 230 Query: 323 ASDPM--NSANRRIDILV 338 + +ANRR+++++ Sbjct: 231 DNSTEAGRAANRRVEVVI 248 >gi|91201036|emb|CAJ74094.1| hypothetical protein kuste3333 [Candidatus Kuenenia stuttgartiensis] Length = 395 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ E L I +VL + + I I GHTD + N LS RA + Sbjct: 293 FEYKKWDIKEEFESNLTNIVDVLEKNPDLQIRIEGHTDNI---GSMKYNIDLSQKRALAV 349 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 L++ G+ E RIS +GF + NRR +I+ Sbjct: 350 KDYLVEKGIHESRIST-TGFGFKHPIAPNVTEEGRALNRRAEIV 392 >gi|302187874|ref|ZP_07264547.1| ompA family protein [Pseudomonas syringae pv. syringae 642] Length = 260 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 82/240 (34%), Gaps = 13/240 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 TK + +L+ +N E ++ + + D+ K L Sbjct: 21 ATKPNPNLEQARSNFTALQTNPEATKVAALETKDASEWLAKAEQAFRNDDDVQKVDQLSY 80 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 ++ ++ A + ++ + + + + T G L Sbjct: 81 LTSQRVELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 ++ D +FD + + P + K+ L + + + G+TD++ A N Sbjct: 139 VTFGD----VLFDYNKAELKPTAQGDIGKLAGFLQENPDRKVIVEGYTDST---GSASYN 191 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 LS RA S L++ GV RI + G+ + + + NRR+++ + + Sbjct: 192 QSLSERRADSVRMALVRMGVDPARIVTM-GYGKEYPVADNSSNSGRAMNRRVEVTISNDN 250 >gi|289807272|ref|ZP_06537901.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 135 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 2/133 (1%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 S + + + + G+ I IID +N PMF S+ P +L+ I VL Sbjct: 3 IESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNG 62 Query: 262 STEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 IS+ GHTD P+ N NW LS DRA ++ + L+ G+ ++ ++ G A Sbjct: 63 IPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATM 122 Query: 320 LKIASDPMNSANR 332 P ++ NR Sbjct: 123 RLSDRGPDDAINR 135 >gi|149376619|ref|ZP_01894379.1| Flagellar motor protein [Marinobacter algicola DG893] gi|149359137|gb|EDM47601.1| Flagellar motor protein [Marinobacter algicola DG893] Length = 260 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 71/188 (37%), Gaps = 5/188 (2%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + + S + ++ + E+ P + +M + R + L Sbjct: 55 GVFNAPQRSFQPIEVGDQSRRSTPQAAEDVINPPVTEAPQNPSMNAEGRTEALRAMADQL 114 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 V ET+ + +S+ RN+ +F + P + V++KI VL + Sbjct: 115 ALEFDELINQGVVTLETSDEWLELSL---RNSLLFGSGDAEPHYDAFDVVEKIAAVLRNR 171 Query: 263 TEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I + G TD P A NW LS R+ + ++L GV +R++ + G+ H+ Sbjct: 172 DNAIRVEGFTDNRPINTSAFPSNWELSAARSAAVVRMLSMEGVEAERLAAV-GYGEHQPV 230 Query: 322 IASDPMNS 329 +D Sbjct: 231 ARNDTEEG 238 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 54/129 (41%), Gaps = 1/129 (0%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 DD +N W I YADF+T+L AFF+VM+ +++ ++ K + + + + Sbjct: 7 QDDDLHNKERWLISYADFITLLFAFFVVMYSVSSVNEGKYKVLSETLTGVFNAPQRSFQP 66 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 I + Q D I+ +T+ + + + + + + + + + + ++ Sbjct: 67 IEVGDQSRRSTPQAAED-VINPPVTEAPQNPSMNAEGRTEALRAMADQLALEFDELINQG 125 Query: 143 CKNSLTRDS 151 T D Sbjct: 126 VVTLETSDE 134 >gi|149374667|ref|ZP_01892441.1| outer membrane protein; OmpA family [Marinobacter algicola DG893] gi|149361370|gb|EDM49820.1| outer membrane protein; OmpA family [Marinobacter algicola DG893] Length = 271 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 100/277 (36%), Gaps = 20/277 (7%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N ++ S + + P+ +++ + E I + + G + ++L Sbjct: 5 NMTLGMAVSVSVLVAGCASTPQDNAKVDEARAAYEEIRNDPNVARSGDRQLRSAREQLSR 64 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 L++ +++ + + + + + + ++ E + Sbjct: 65 AESLLADGADIAEIEHAAYLANRHAQIAGEQGERAELQEQIDSAEARRKELELEMRADEA 124 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + AK++ + + A+ +G++ +FD + Sbjct: 125 AQARREAKELRLQMEAMQAEQTDRGMVLT-------------LGDVLFDLDKAELKSSGE 171 Query: 250 VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 ++++ E +A + G+TD++ A N LS RA + L++ G+S R Sbjct: 172 ATVRRLAEFMAEYENRRVRVEGYTDST---GEASYNQGLSERRAQAVSDTLIEMGISRTR 228 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 + GF ++D NRR++I++ D +G Sbjct: 229 VET-KGFGEQFPVASNDTSGGRQQNRRVEIVISDEEG 264 >gi|161524037|ref|YP_001579049.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189351202|ref|YP_001946830.1| putative OmpA family transmembrane protein [Burkholderia multivorans ATCC 17616] gi|160341466|gb|ABX14552.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616] gi|189335224|dbj|BAG44294.1| putative OmpA family transmembrane protein [Burkholderia multivorans ATCC 17616] Length = 214 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F + P +L + L + +V S+ G+TD++ A+ N LS + Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQVTASVIGYTDST---GSAQLNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L++ GV+ +R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNALVQRGVAGNRLSA-QGMGPSNPVADNSTEAGRAQNRRVEIYLRAPQ 212 >gi|328554593|gb|AEB25085.1| flagellar motor protein MotS [Bacillus amyloliquefaciens TA208] Length = 206 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 64/187 (34%), Gaps = 14/187 (7%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 + + P S K + L + + + + ++ + Sbjct: 26 AEKFQSAVTSIHTNGSGGEPASSSKANENSEQDLL------LQNVKTYIKTYHLSSKMTA 79 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277 + G+++ + + +F + L VL +I +L I + GHTD+ Sbjct: 80 KRDERGVVLVLQEA---VLFQTGKADVLKNAEPVLHQIAVLLKTLPNAIQVEGHTDSRRI 136 Query: 278 RN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 NW LS RA S + S R + G+A + + + NRR Sbjct: 137 STYQFPSNWELSSARAASVIRYFTAKEDFSAKRFISV-GYADTKPVKDNKSIRHMKENRR 195 Query: 334 IDILVED 340 ++I+++ Sbjct: 196 VEIVIKK 202 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 29/58 (50%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 + +AD +T+++ FF++++ ++ D + ++ + G AS +E + + Sbjct: 1 MVTFADLITLILVFFILLFSMSQIDAEKFQSAVTSIHTNGSGGEPASSSKANENSEQD 58 >gi|301309047|ref|ZP_07214992.1| outer membrane protein, OmpA family [Bacteroides sp. 20_3] gi|300833073|gb|EFK63698.1| outer membrane protein, OmpA family [Bacteroides sp. 20_3] Length = 277 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 85/219 (38%), Gaps = 20/219 (9%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 ++ + +L RD+ ++ + N E L L ++K+ + ++R + Sbjct: 50 DDNDALNNRIAALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTIN 109 Query: 195 LAKKISSTLSGLVADNIV-----------KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + + + V + + + + +++ D+ +F S+ Sbjct: 110 ELQDMMNAQNAKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKL---LFQSGSAK 166 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 L K+ EVL ++ I GHTD+ P DNW LS+ RA S ++L K Sbjct: 167 VDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTK 226 Query: 302 -SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 GV+ +I G ++ S NRR +I+ Sbjct: 227 DYGVNPLQIQPC-GRGEFMPVADNETADGRSKNRRTEII 264 >gi|283853608|ref|ZP_06370844.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B] gi|283570999|gb|EFC19023.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B] Length = 345 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 12/136 (8%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + ++ L+E I++ + FD PE + VL++ ++ T Sbjct: 214 NEAAREKFLECALYEWIEDEIVV-----FRSIYFDFDKYNIKPEFVPVLEEGTAIIKSKT 268 Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GHTD+ + N +L RA S +K G+ RI IS F Sbjct: 269 GMKVVLEGHTDSV---GSDQYNMKLGQRRADSVKAFFVKKGIDASRIETIS-FGESDPVA 324 Query: 323 ASDPM--NSANRRIDI 336 + + NRR I Sbjct: 325 TNKTAQGRALNRRCVI 340 >gi|221199341|ref|ZP_03572385.1| ompA family protein [Burkholderia multivorans CGD2M] gi|221205757|ref|ZP_03578772.1| ompA family protein [Burkholderia multivorans CGD2] gi|221211556|ref|ZP_03584535.1| inner membrane lipoprotein YiaD [Burkholderia multivorans CGD1] gi|221168917|gb|EEE01385.1| inner membrane lipoprotein YiaD [Burkholderia multivorans CGD1] gi|221174595|gb|EEE07027.1| ompA family protein [Burkholderia multivorans CGD2] gi|221180626|gb|EEE13029.1| ompA family protein [Burkholderia multivorans CGD2M] Length = 214 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F + P +L + L + +V S+ G+TD++ A+ N LS + Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQVTASVIGYTDST---GSAQLNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L++ GV+ +R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNALVQRGVAGNRLSA-QGMGPSNPVADNSTEAGRAQNRRVEIYLRAPQ 212 >gi|91213065|ref|YP_543051.1| putative outer membrane lipoprotein [Escherichia coli UTI89] gi|117625836|ref|YP_859159.1| putative outer membrane lipoprotein [Escherichia coli APEC O1] gi|218560629|ref|YP_002393542.1| outer membrane lipoprotein [Escherichia coli S88] gi|306816094|ref|ZP_07450232.1| putative outer membrane lipoprotein [Escherichia coli NC101] gi|331649382|ref|ZP_08350468.1| inner membrane lipoprotein YiaD [Escherichia coli M605] gi|91074639|gb|ABE09520.1| putative outer membrane protein [Escherichia coli UTI89] gi|115514960|gb|ABJ03035.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|218367398|emb|CAR05180.1| putative outer membrane lipoprotien [Escherichia coli S88] gi|281180597|dbj|BAI56927.1| conserved hypothetical protein [Escherichia coli SE15] gi|294489870|gb|ADE88626.1| OmpA family protein [Escherichia coli IHE3034] gi|305850490|gb|EFM50947.1| putative outer membrane lipoprotein [Escherichia coli NC101] gi|307628634|gb|ADN72938.1| putative outer membrane lipoprotein [Escherichia coli UM146] gi|323949796|gb|EGB45680.1| OmpA family protein [Escherichia coli H252] gi|330909615|gb|EGH38129.1| outer membrane protein A precursor [Escherichia coli AA86] gi|331041880|gb|EGI14024.1| inner membrane lipoprotein YiaD [Escherichia coli M605] Length = 219 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GSHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|317133447|ref|YP_004092761.1| OmpA/MotB domain protein [Ethanoligenens harbinense YUAN-3] gi|315471426|gb|ADU28030.1| OmpA/MotB domain protein [Ethanoligenens harbinense YUAN-3] Length = 259 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 76/203 (37%), Gaps = 8/203 (3%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 ++ K S ++ + +++S + + ++QD + Sbjct: 37 TDVQKASQVAEAIRKGFNASQQAVQQSPVSQNTNSTNITMSNTSTTSEVISQVQDWSSLY 96 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + K V +T G++I++ D ++ S++ ++ +IG+ L Sbjct: 97 DQVTKLVAQAGLQKNVDLSSTSKGLVITLKDNT---LYTPGSAVMNQPGQDLVLRIGDAL 153 Query: 260 AHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 I + GHTD+ P N DN LS RA + + L+ G+ +I G Sbjct: 154 KQVNYALIIVEGHTDSDPIHNAQFQDNIELSSARADNVERALIGRGLDAAKI-AAMGRGD 212 Query: 318 HRLKIASDPMN--SANRRIDILV 338 +D + NRR+ I + Sbjct: 213 TVPVAPNDTPANKAKNRRVVITI 235 Score = 37.3 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 32/87 (36%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 +N W + Y+D M +L+ F++++ ++ TD + + A + Sbjct: 2 KRPPEKDNSERWLLPYSDLMNLLLILFIILYAMSKTDVQKASQVAEAIRKGFNASQQAVQ 61 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITK 108 QN + + E I++ Sbjct: 62 QSPVSQNTNSTNITMSNTSTTSEVISQ 88 >gi|220933311|ref|YP_002512210.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219994621|gb|ACL71223.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 218 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + GV +++++ FD + E VL + Sbjct: 77 NYMDQQEAELRRELEGTGVSVTRDGDNLILNM---PGNITFDVNRDEVKSEFYPVLNSVA 133 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +VL + I + GHTD++ N LSL RA S L+ G+ RI+ I GF Sbjct: 134 KVLKKYDKTAIEVAGHTDST---GTVEHNMALSLRRADSVAGYLLGQGIQNVRIATI-GF 189 Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338 HR ++ NRR+++ + Sbjct: 190 GPHRPIADNNTAQGRSLNRRVELTL 214 >gi|146307724|ref|YP_001188189.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp] gi|145575925|gb|ABP85457.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 270 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 84/245 (34%), Gaps = 14/245 (5%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 + + E+ + + SL R D+ Sbjct: 24 QPGSEQALEAARASFQSVKEDPNVLRAAPKDVIRAGESLARAERLSSYWGSGADVRHYAY 83 Query: 169 KEE-------NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + + L++E+ ++ +++ L + + LS + ++ + Sbjct: 84 LSQRYAEIARQHSDSSLNQERAAKLELERQRLQLTLREAKLLSVQQHNGWLEEQMVSLAT 143 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280 + ++ +FD + P + K+ + L + + I G+TD + Sbjct: 144 SETERGLVMTLGDMLFDAGRADLQPAANRTVLKLVQFLQINPQRRVRIEGYTDNT---GS 200 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A +N LS RA + +L+ G+ RI ++ G+ + + NRR++I+ Sbjct: 201 AEENLELSRARAQAVADLLVDLGIDAKRI-QVVGYGVDFPVAENASARGRAQNRRVEIVF 259 Query: 339 EDRQG 343 D +G Sbjct: 260 SDERG 264 >gi|332701239|ref|ZP_08421327.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332551388|gb|EGJ48432.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 282 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 78/233 (33%), Gaps = 14/233 (6%) Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 + + + + ++ + ++ K + Sbjct: 59 PVPGPNEDEPGVRTVEGEVTRITYELKEGARLVAPLQILRNYENALKKLGGEVFYRYDKF 118 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + ++ ++ + +L + S ++ VA ++ + + Sbjct: 119 TMAGKAPKDGRTVYLLIDVRNDGQTYELTALVVSDMAQEVALGSLEMYEKLEQDGRLALY 178 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 I FD S PE+ ++ +I +++ + I + GHTD A N + Sbjct: 179 IN-------FDTGKSTIKPESRTIVDEIAKMMQENAGLKIKVEGHTDNQ---GGAESNQK 228 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 LS RA + + ++ G+S R+ G + ++ + NRR++++ Sbjct: 229 LSEARAKAVVEAILAKGISASRLKPA-GHGQTKPIADNKNEEGRAKNRRVELV 280 >gi|327395890|dbj|BAK13312.1| inner membrane lipoprotein YiaD precursor [Pantoea ananatis AJ13355] Length = 237 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SSS P L + Sbjct: 97 YMDVQEAKLRDKMKGTGVSVTRQGDNIVLNM---PNNVTFDSSSSSLKPAGANTLTGVAM 153 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ GHTD++ N RLS RA S L+ GV+ DR+ G Sbjct: 154 VLKEYPKTAVNVVGHTDST---GSRALNMRLSQQRAESVASALIVQGVASDRLHT-RGAG 209 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 + + NRR++I + Sbjct: 210 PDSPVATNSTEAGKAQNRRVEITL 233 >gi|313675999|ref|YP_004053995.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312942697|gb|ADR21887.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 671 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 94/298 (31%), Gaps = 15/298 (5%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH---ITKNS 110 + A D + Y ++ + QN E + S + Sbjct: 378 LAADDKTLFFSSSGYIGFGKNDIYMTRRLDDTWQNWSEPYNMGPQVNSSGDDLFFSMPAE 437 Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 + + + L N + D E K L E E Sbjct: 438 GNFAYYTKEDSVGDMNIYRLPMPLFNELDPVITISGRVVDMETQKPLAAIVSYETQDGVE 497 Query: 171 ENY-FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 P + E + + + Q +AK D + I+ I Sbjct: 498 VGKVETDPTTGEYEITLPAGQEYQYIAKVKGYLPISENVDLTNQKESKSFNNDMIMAPIK 557 Query: 230 DQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284 ++ + F S L + L ++ EV+ ++++ + I GHTD++ N Sbjct: 558 EKAEIVLNNVFFAFDSHELLGSSKSELNRMVEVMNDNSQIEVVIIGHTDST---GPEEYN 614 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 LS RA S L ++G+ E+R+ + G + +D + NRR++ VE Sbjct: 615 QVLSEKRAQSVVNYLTQNGIDEERLEYL-GKGENEPAYPNDTRENRAKNRRVNFKVER 671 >gi|311106926|ref|YP_003979779.1| OmpA family protein 3 [Achromobacter xylosoxidans A8] gi|310761615|gb|ADP17064.1| OmpA family protein 3 [Achromobacter xylosoxidans A8] Length = 199 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 13/115 (11%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + P L+ I ++ S+ ++I GHTD+ + A N LSL R Sbjct: 86 GDVLFDFDKTAIRPAAEPTLRDIASLIKASSAGTVAIEGHTDS---KGSASYNKDLSLRR 142 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK--------IASDPMNSANRRIDILV 338 A + Q L GV + R+ + G + + + NRR++ ++ Sbjct: 143 AQAVAQWLTSHGVDKARL-TVKGLGDTQPIQSNRLANGADNPQGRAQNRRVEFVL 196 >gi|301063232|ref|ZP_07203781.1| OmpA family protein [delta proteobacterium NaphS2] gi|300442660|gb|EFK06876.1| OmpA family protein [delta proteobacterium NaphS2] Length = 214 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 70/193 (36%), Gaps = 19/193 (9%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + L ++ E PL+ K + K + + Sbjct: 31 GGITESLLSPEKARPIDSQSEAGEWQPLNAGDASKDKTQPVKTRSIKVLKKEKGVDTWET 90 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVIS 267 + + I FD +S PE+ +L+++G+ LA +I Sbjct: 91 VNAPEKRTGGFVNLKIE---------FDVNSYTIRPESYNLLRELGKALADPRLRDRIII 141 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP 326 I GHTD+ + N RLSLDRA + L+ GV+ DR+ ++ G+ + Sbjct: 142 INGHTDSD---GKEKYNVRLSLDRAAAVKTYLIDHCGVAPDRL-EVVGYGESMPLTPNTS 197 Query: 327 MN--SANRRIDIL 337 NRR++I+ Sbjct: 198 KENKQLNRRVEIV 210 >gi|269137375|ref|YP_003294075.1| putative outer membrane lipoprotein [Edwardsiella tarda EIB202] gi|267983035|gb|ACY82864.1| putative outer membrane lipoprotein [Edwardsiella tarda EIB202] gi|304557476|gb|ADM40140.1| Outer membrane protein [Edwardsiella tarda FL6-60] Length = 219 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD +SS P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDSNSSNLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GVS RI I G Sbjct: 137 VLKEYQKTAVNVVGYTDST---GSRDLNMRLSQQRADSVASALIVQGVSAGRIRTI-GMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 + + NRR++I + Sbjct: 193 PANPIATNSTAAGKAQNRRVEITL 216 >gi|262194690|ref|YP_003265899.1| cysteine-rich repeat protein [Haliangium ochraceum DSM 14365] gi|262078037|gb|ACY14006.1| cysteine-rich repeat protein [Haliangium ochraceum DSM 14365] Length = 1793 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 8/116 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q +F+ +S + E+ L + L + + I GHT + AR N RLS Sbjct: 1677 QVGKILFEFNSGVIKEESFPELDSVVRKLQSNPAVHLLIEGHTSSE---GSARYNRRLSG 1733 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHR-LKIASDPMNSA--NRRIDILVEDRQ 342 RA S + L++ GV +R++ G + L D + NRR++ + + Sbjct: 1734 VRAASVRKYLVEHGVEANRLAS-KGVGEAQLLIAPDDTEEARETNRRVEFTITRGR 1788 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 72/270 (26%), Gaps = 18/270 (6%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 P + D + GS + + + + Sbjct: 1412 PGEAKYHGCPAPTVVTDTCSADSGRGAVRVAPELAFVPGSALLSLPSRVPLEALAERAAA 1471 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + + + + D + + L +S Sbjct: 1472 EPELLVAIDVGGAGAEPGLAQRRADAVAAFLASKGVDLGQVSVLGRGDAASV-------- 1523 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + V T + I D ++ +S+ + +L++ Sbjct: 1524 GADDAATYPVRFERRCPSEIPPTTLCKELEIGDDFKIA-YELNSANLQAASKEMLERDVL 1582 Query: 258 VLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + + I + GHT N LS RA S L++ G+ +R+S + G Sbjct: 1583 WILRAHPQIRVEVQGHTSGE---GKLAYNMELSQRRAQSVVDFLVEHGIEGERLSAV-GH 1638 Query: 316 AHHRLKIA---SDPMNSANRRIDILVEDRQ 342 + S+ NRRI+ ++ R+ Sbjct: 1639 GPKVPLVTPENSEADRERNRRIEFSIQPRR 1668 >gi|261251362|ref|ZP_05943936.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891] gi|260938235|gb|EEX94223.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891] Length = 329 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 9/131 (6%) Query: 213 KGVLFETTRTGILISIIDQRNTPM--FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269 V + ++ + D+ FD SS + L ++ L E + + Sbjct: 195 PMVTEQHPQSITKSEMFDKVTLSSGPFDSESSELNESSSQQLSQLVATLKEYPEAKVEVV 254 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327 GHTD++ + N LS+ RA L G+ RI I G + + Sbjct: 255 GHTDST---GSSSYNQALSIQRATEVSNFLESEGIDSSRI-SIDGHGETQPIAPNSTSQG 310 Query: 328 NSANRRIDILV 338 + NRR+++ + Sbjct: 311 RANNRRVEVTI 321 >gi|150007860|ref|YP_001302603.1| OmpA family outer membrane protein [Parabacteroides distasonis ATCC 8503] gi|262381639|ref|ZP_06074777.1| outer membrane protein [Bacteroides sp. 2_1_33B] gi|298376779|ref|ZP_06986734.1| lipoprotein PG3 [Bacteroides sp. 3_1_19] gi|301310112|ref|ZP_07216051.1| lipoprotein PG3 [Bacteroides sp. 20_3] gi|149936284|gb|ABR42981.1| outer membrane protein, OmpA family [Parabacteroides distasonis ATCC 8503] gi|262296816|gb|EEY84746.1| outer membrane protein [Bacteroides sp. 2_1_33B] gi|298266657|gb|EFI08315.1| lipoprotein PG3 [Bacteroides sp. 3_1_19] gi|300831686|gb|EFK62317.1| lipoprotein PG3 [Bacteroides sp. 20_3] Length = 227 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + +F +SS + L+ L + + I I G TD + N LS Sbjct: 106 DSGILFATNSSTLSDASKSALRNFATSLKANPDTDIRIIGFTDNT---GKVDYNQTLSEK 162 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA S Y LM GVS DR+ G H ++D NRR++I++ Q Sbjct: 163 RAKSVYDYLMMQGVSTDRMV-YEGKGIHDPVASNDTPEGRSLNRRVEIVILANQ 215 >gi|238924159|ref|YP_002937675.1| hypothetical protein EUBREC_1797 [Eubacterium rectale ATCC 33656] gi|238875834|gb|ACR75541.1| hypothetical protein EUBREC_1797 [Eubacterium rectale ATCC 33656] Length = 275 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 67/209 (32%), Gaps = 10/209 (4%) Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + L + + + +K + + L + Sbjct: 60 PGGSTSIGDGRLVGAGVSQLEFLDKYYNDLANSKSTTESTTEGDDKNAEEQYEQMELSES 119 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K L ++ V + + +S+ +F+ + + E V+ KI Sbjct: 120 EKMSEQIEKQLENTSLQDAVEVDFNAQYVQLSLN---GALLFESGKADVMEEAYPVVNKI 176 Query: 256 GEVLAHST-EVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311 +LA +I I GHTD P + N LS+ RA S + + ++ I Sbjct: 177 SSILAAYQDNLIEIEGHTDNVPVSSRSKYESNDVLSMYRALSVANYIRDNTSLNPAHIKS 236 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338 SG + + + NRR++I V Sbjct: 237 -SGRGDYDPVADNSTPEGRARNRRVEIKV 264 >gi|110833683|ref|YP_692542.1| outer membrane protein OprF [Alcanivorax borkumensis SK2] gi|110646794|emb|CAL16270.1| outer membrane protein OprF [Alcanivorax borkumensis SK2] Length = 384 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 86/278 (30%), Gaps = 12/278 (4%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + G + GI + E +S + D + + + R Sbjct: 104 HFAGNSAFEPYVGIGAGELRFEPTSNSSDDNAETIGTLETGFQTLLHPHFLLDVGARPYY 163 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + N L S ++ ++ + + + Sbjct: 164 SFDAERWDAEVYAGLNFLIGGSSNEQEPAPIENVVTDSDGDGVPDDRDQCANTPAGAQVD 223 Query: 190 K---RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 L D I +++ V + + + + + F + Sbjct: 224 ATGCELDDDNDSIVNSMDDCPNTPAGALVDDKGCQKYLEKDVKETL-YVEFGHDKTEVRQ 282 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304 + L+ + E + + GHTD++ A N +LS RA + VL+ GV Sbjct: 283 TSYPSLENLAEDMRQYPSANLVLEGHTDST---GSAAYNKKLSQQRADAVKAVLVDKFGV 339 Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 S DRI+ + G+ + + + NRR++ +++ Sbjct: 340 SADRITTV-GYGEEKPISDNKTSEGRAENRRVETILKA 376 >gi|167580182|ref|ZP_02373056.1| ompA family protein [Burkholderia thailandensis TXDOH] gi|257139912|ref|ZP_05588174.1| ompA family protein [Burkholderia thailandensis E264] Length = 215 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F P +L + L + ++ S+ G+TD++ A N LS + Sbjct: 103 PSSVTFATDQYAVTPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + GV+ R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNALAQRGVAATRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212 >gi|71734248|ref|YP_276006.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487118|ref|ZP_05641159.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289626062|ref|ZP_06459016.1| ompA family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646239|ref|ZP_06477582.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298488307|ref|ZP_07006339.1| Outer membrane lipoprotein omp16 precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554801|gb|AAZ34012.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157129|gb|EFH98217.1| Outer membrane lipoprotein omp16 precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320323146|gb|EFW79235.1| ompA family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329582|gb|EFW85571.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330867556|gb|EGH02265.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330878322|gb|EGH12471.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330892526|gb|EGH25187.1| ompA family protein [Pseudomonas syringae pv. mori str. 301020] gi|330985082|gb|EGH83185.1| ompA family protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009256|gb|EGH89312.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 260 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 82/240 (34%), Gaps = 13/240 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 TK + +L+ +N E ++ + + D+ K L Sbjct: 21 ATKPNPNLEQARSNFTALQTNPEATKVAALETKDASEWLAKAEQAFRNDDDVKKVDQLSY 80 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N+ ++ A + ++ + + + + T G L Sbjct: 81 LTNQRVELAKQTIALRTSEAALQNASADRAKARLEA--RDAQIAALKNSLNAKQTERGTL 138 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 ++ D +FD + + P + K+ L + + + G+TD++ A N Sbjct: 139 VTFGD----VLFDYNKADLKPTAQGDIGKLAAFLQENPDRKVIVEGYTDST---GSASYN 191 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 LS RA S L++ GV R+ + G+ + + + NRR+++ + + Sbjct: 192 QSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSNSGRAMNRRVEVTISNDN 250 >gi|115376409|ref|ZP_01463646.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] gi|115366616|gb|EAU65614.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] Length = 723 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 80/255 (31%), Gaps = 14/255 (5%) Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 P + + + + L G + LS S ++ + T Sbjct: 479 PLPGGAIRIAIQKDGYRLAERDLTLVPGQPQTVEVALESMAQPATLSFSTTAQKKPVAAT 538 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 + +T + + + + +Q S L Sbjct: 539 LRLSGPQKQELATSAAAPTKLVLPPGHYLVDVMAPGYLAQTREVQVAEGTAQSFAFDLKP 598 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVIS 267 K V + +L + F ++ + +L ++ +V+ ++ + + Sbjct: 599 APKKKLVTVADNKLALLQQVQ-------FADGKAVIQANSQPLLAQVVDVIVRNNIQRVR 651 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + HTD N +LS +RA + L +SG+ R+ ++ G+ R + Sbjct: 652 VEAHTDNQ---GNPAANLKLSQERAQAVATFLAQSGLDAARM-EVQGYGDARPIAPNLTP 707 Query: 328 NSA--NRRIDILVED 340 NRR++ ++ + Sbjct: 708 RGKELNRRVEFIILE 722 >gi|312959441|ref|ZP_07773958.1| OmpA/MotB [Pseudomonas fluorescens WH6] gi|311286158|gb|EFQ64722.1| OmpA/MotB [Pseudomonas fluorescens WH6] Length = 231 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 44/148 (29%), Gaps = 11/148 (7%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 K + +G V I I D F S+ L I Sbjct: 91 KGMQVDANGCPPAPPAAAVEEMAVVKEETIVIRDVH----FQFDSANLTTADKTTLDTIA 146 Query: 257 EVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + + + GHTD+ N +LS RA+S + L+ GV + G Sbjct: 147 ARLKQEAPSAQLRVSGHTDSV---GADAYNQKLSQKRAHSVTEYLISRGVPRSSFVSVVG 203 Query: 315 FAHHRLKIASDPMNSA--NRRIDILVED 340 + + NRR I + Sbjct: 204 AGESQPVADNKTAEGRALNRRTQIQINR 231 >gi|269968226|ref|ZP_06182255.1| putative lipoprotein [Vibrio alginolyticus 40B] gi|269827149|gb|EEZ81454.1| putative lipoprotein [Vibrio alginolyticus 40B] Length = 281 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 9/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L + GV + L ++ N F SS L+ + +L Sbjct: 142 DQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRGVARIL 199 Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + G+TD++ N LS RA S Q L+ V+ R G+ Sbjct: 200 VEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQNVAPGRAIA-RGYGER 255 Query: 319 RLKIASDPMNSA--NRRIDILVE 339 ++ NRR++I + Sbjct: 256 NPICSNQTSEGRACNRRVEIQIL 278 >gi|171060845|ref|YP_001793194.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6] gi|170778290|gb|ACB36429.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6] Length = 229 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 16/155 (10%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 KR++D K + + G D + TT + ++I FD S P + Sbjct: 87 KRMEDKRKAMEAATQGTGID------VVRTTDNQLKVNIPAD---FSFDVGRSAVKPVMV 137 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 VL K+ + L +T + + GHTD+ N LSLDRA + L + GV RI Sbjct: 138 PVLDKLAQGL-DATVQVQVIGHTDS---SGSDAVNNPLSLDRAEAVRDYLSRHGVPAARI 193 Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 ++ G + + NRR++I + + Q Sbjct: 194 -QVEGRGEREPVADNATPDGRAQNRRVEIFLREPQ 227 >gi|157889006|dbj|BAF80954.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 7/104 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 F PE +Q++G+VL + + +I GHTD++ N +LSL+RA Sbjct: 222 GYFGFDQISINPEFAQKIQEVGKVLEENPQYYTILEGHTDST---GSKVYNQKLSLERAK 278 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + + L KSGV++++I G+ + K ++D + NRR++ Sbjct: 279 AVAKELEKSGVAKEKI-AAKGYGFDKPKASNDTKEGRAQNRRVE 321 >gi|254229577|ref|ZP_04922989.1| rickettsia 17 kDa surface antigen family [Vibrio sp. Ex25] gi|151937860|gb|EDN56706.1| rickettsia 17 kDa surface antigen family [Vibrio sp. Ex25] Length = 269 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 9/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L + GV + L ++ N F SS L+ + +L Sbjct: 130 DQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRGVARIL 187 Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + G+TD++ N LS RA S Q L+ V+ R G+ Sbjct: 188 VEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQNVAPGRAIA-RGYGER 243 Query: 319 RLKIASDPMNSA--NRRIDILVE 339 ++ NRR++I + Sbjct: 244 NPICSNQTSEGRACNRRVEIQIL 266 >gi|260552490|ref|ZP_05825866.1| inner membrane lipoprotein yiaD [Acinetobacter sp. RUH2624] gi|260405297|gb|EEW98793.1| inner membrane lipoprotein yiaD [Acinetobacter sp. RUH2624] Length = 217 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 9/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV G + I+ + FD + S P L K+ + Sbjct: 76 YLDQKEKKLREQMAGTGVEVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYATLDKVAQ 133 Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 LA + I + G+TD + N LS RA S L GVS RI G+ Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVKIYLAGKGVSSSRIDA-QGYG 189 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 + + NRR++I + +Q Sbjct: 190 SSNPIADNSTASGREQNRRVEISIYAKQ 217 >gi|37523008|ref|NP_926385.1| photosystem I P700 chlorophyll a apoprotein A2 [Gloeobacter violaceus PCC 7421] gi|68052682|sp|Q7NFT5|PSAB_GLOVI RecName: Full=Photosystem I P700 chlorophyll a apoprotein A2; AltName: Full=PsaB gi|35214011|dbj|BAC91380.1| Photosystem I P700 chlorophyll A apoprotein A2 [Gloeobacter violaceus PCC 7421] Length = 872 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 13/117 (11%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290 +FD S + L ++ V+ +E + I GHTD+ N +LS + Sbjct: 753 PENIVFDFDKSSVKLDADPALNRVVGVIQFYGSEPVEILGHTDSL---GEDAYNQKLSEE 809 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVE 339 RA + K G+ +R++ G+ + + NRR++IL++ Sbjct: 810 RASAVKAFFEKKGIEAERLTA-KGYGETKPVAPNAKPDGSDNPDGRQQNRRVEILIK 865 >gi|197364467|ref|YP_002144104.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197095944|emb|CAR61525.1| putative outer membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 205 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 65 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 121 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + SG Sbjct: 122 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 177 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 178 PANPIASNSTAEGKAQNRRVEITL 201 >gi|237736307|ref|ZP_04566788.1| outer membrane protein [Fusobacterium mortiferum ATCC 9817] gi|229421655|gb|EEO36702.1| outer membrane protein [Fusobacterium mortiferum ATCC 9817] Length = 203 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 10/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L V + + + F +S+ L I VL Sbjct: 65 DNQEKELRERLKNTEVEVSREGDNLNLYL---PGGVTFATNSANIASNFYGPLNSIASVL 121 Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E + G+TD + A N LS RA S + GV R++ + G + Sbjct: 122 VQYPETRIVVNGYTDNT---GAASYNLDLSQRRANSVRDYFISQGVESYRVTSV-GHGIN 177 Query: 319 RLKIASDPM--NSANRRIDILVE 339 + + + NRR++I + Sbjct: 178 NPRATNSTAAGRAENRRVEIQIL 200 >gi|194430954|ref|ZP_03063247.1| OmpA family protein [Shigella dysenteriae 1012] gi|194420409|gb|EDX36485.1| OmpA family protein [Shigella dysenteriae 1012] gi|332085980|gb|EGI91144.1| inner membrane lipoprotein yiaD [Shigella dysenteriae 155-74] Length = 219 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|237744908|ref|ZP_04575389.1| outer membrane protein [Fusobacterium sp. 7_1] gi|229432137|gb|EEO42349.1| outer membrane protein [Fusobacterium sp. 7_1] Length = 166 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 5/117 (4%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 +I+ FD S+ P+ +L + + + + ++I GHTD + N Sbjct: 28 TIVLDDRALNFDFDKSVVKPQYNEMLTNLKDFIEKNDYEVTIVGHTD---YIASNAYNMG 84 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 LS RA + L++ G+ RI I + + NRR++ + R Sbjct: 85 LSKRRAEAVKAKLIELGLDPSRIVGIVPRGEEEPIADNATTEGRAKNRRVEFKLVKR 141 >gi|332668211|ref|YP_004450999.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332337025|gb|AEE54126.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 317 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 9/128 (7%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + GI I ++ F+ S + +L +L ++ E I GHTD Sbjct: 196 YIQQDGEGIKIRFSEK---VSFETGKSELVAAADSILAITVRMLNYNPEAKCRIEGHTDD 252 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 A+DN LS RA + L G+ ++ G+ + ++ NR Sbjct: 253 V---GNAKDNLLLSQSRAKAVATALKNRGIPTSVQLEVKGYGSTKPVASNSSAEGKSLNR 309 Query: 333 RIDILVED 340 R+DI++E Sbjct: 310 RVDIVIEK 317 >gi|149909453|ref|ZP_01898108.1| outer membrane protein [Moritella sp. PE36] gi|149807563|gb|EDM67512.1| outer membrane protein [Moritella sp. PE36] Length = 214 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 70/207 (33%), Gaps = 9/207 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + + + T ++ KS + A+ + Sbjct: 13 AALTGCARQNATTGEQETNTATKSAIGGAIAGALIGASTGKKNAALFGALGGAAIGGGIG 72 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 L + I GV + L I+ + F + + L + Sbjct: 73 HYFDRQEEELRQELIGSGVQVKRVGENELQLIMAKGIG--FQTAGYNLSGDIYSSLNSVA 130 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 ++L + I GHTD+ A+ N LS +RA S + L K G+ R+S G+ Sbjct: 131 KILNEYPKSSLRIVGHTDSV---GSAQSNLTLSEERAESVSEYLNKRGIKSGRLST-RGY 186 Query: 316 AHHRLKIASDP--MNSANRRIDILVED 340 R +++ +ANRR++I + Sbjct: 187 GERRPIASNETKSGRAANRRVEISITA 213 >gi|172059479|ref|YP_001807131.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6] gi|171991996|gb|ACB62915.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 316 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 79/248 (31%), Gaps = 18/248 (7%) Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR--------DSEK 153 I + G + L + + N + + Sbjct: 74 TAGTIAPPPANATPGQVVAGGKVPDEATKAAVLQKLRDTYGAANVVDQIEVGDVATPPNW 133 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 ++ K + + + E + + + Q LA +++TL+ I Sbjct: 134 SANVQKLLGAQLKQISKGQLKINGTQIEVKGEVHNEAQRQQLASDMANTLNPTYT--IKN 191 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272 G+ + G+L + R F+ S+ P+ +L ++ L+ I GHT Sbjct: 192 GLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRQILDQMAAALSKLQNRTVDIIGHT 250 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330 D N LS RA + L+ + +++ +G + +D + Sbjct: 251 DN---SGNRTSNIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQPIAPNDTAEGRAR 306 Query: 331 NRRIDILV 338 NRRI+ V Sbjct: 307 NRRIEFRV 314 >gi|308174663|ref|YP_003921368.1| flagellar motor rotation protein [Bacillus amyloliquefaciens DSM 7] gi|307607527|emb|CBI43898.1| motility protein (flagellar motor rotation) [Bacillus amyloliquefaciens DSM 7] gi|328912997|gb|AEB64593.1| motility protein (flagellar motor rotation) [Bacillus amyloliquefaciens LL3] Length = 206 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 64/187 (34%), Gaps = 14/187 (7%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 + + P S K + L + + + + ++ + Sbjct: 26 AEKFQSAVTSIHTNGSGGEPASSSKANENSEQDLL------LQNVKTYIKTHHLSSKMTA 79 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277 + G+++ + + +F + L VL +I +L I + GHTD+ Sbjct: 80 KRDERGVVLVLQEA---VLFQTGKADVLKNAEPVLHQIAVLLKTLPNAIQVEGHTDSRRI 136 Query: 278 RN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 NW LS RA S + S R + G+A + + + NRR Sbjct: 137 STYQFPSNWELSSARAASVIRYFTAKEDFSAKRFISV-GYADTKPVKDNKSIRHMKENRR 195 Query: 334 IDILVED 340 ++I+++ Sbjct: 196 VEIVIKK 202 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 29/58 (50%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 + +AD +T+++ FF++++ ++ D + ++ + G AS +E + + Sbjct: 1 MVTFADLITLILVFFILLFSMSQIDAEKFQSAVTSIHTNGSGGEPASSSKANENSEQD 58 >gi|330828822|ref|YP_004391774.1| OmpA family protein [Aeromonas veronii B565] gi|328803958|gb|AEB49157.1| OmpA family protein [Aeromonas veronii B565] Length = 306 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 67/193 (34%), Gaps = 11/193 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSK-EKILAMKRKKRLQDLAKKISSTLSGLVA 208 + + L + S+ + P L+ + ++ L L ++ ++ LV Sbjct: 70 EGQGNSLLDNAVSASPSLLESPASPSPSLAPISGVPVLQDGATLAKLDMQLQQSMGSLVD 129 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268 V + + + + +F S+ P V+ + +L + + Sbjct: 130 ---AGIVKLTQDENWLTVEL---SSGLLFGSGSAFLGPNAAPVINTLSSILKPVDNYVRV 183 Query: 269 RGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 RG+TD N R NW LS RA + L+ G++ R+ + + Sbjct: 184 RGYTDNQQINNEIYRSNWALSAARAEAVLNGLIADGIAPQRL-AFEAYGEFSPFADNGSE 242 Query: 328 NSA--NRRIDILV 338 NR++ + + Sbjct: 243 QGRLQNRKVVVAI 255 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 51/165 (30%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + K+ +L W + YAD+MT++ A F+V++ + + D +A+ + Sbjct: 1 MRKRYRLHLQGREHLDRWLVSYADYMTLIFALFVVLYSVALVNKDKYRAVIDGMSQAFSV 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + + G+ + Q + S+ E S L S Q + Sbjct: 61 MQSGGNGLLEGQGNSLLDNAVSASPSLLESPASPSPSLAPISGVPVLQDGATLAKLDMQL 120 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + + ++ L + P + Sbjct: 121 QQSMGSLVDAGIVKLTQDENWLTVELSSGLLFGSGSAFLGPNAAP 165 >gi|52140989|ref|YP_085838.1| flagellar motor protein MotB [Bacillus cereus E33L] gi|51974458|gb|AAU16008.1| chemotaxis motB protein (Motility protein B) [Bacillus cereus E33L] Length = 262 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 64 GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 123 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 177 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 178 EITVSGHTDNVPIANSQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255 >gi|315922614|ref|ZP_07918854.1| predicted protein [Bacteroides sp. D2] gi|313696489|gb|EFS33324.1| predicted protein [Bacteroides sp. D2] Length = 405 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 6/105 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ S + L KI ++ + + I+GHTD N LS RA + Y Sbjct: 305 FEFGKSAINKNSYAYLDKIAMLMQRTNLSVEIKGHTDNV---GKEDFNMELSRKRAKAVY 361 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+K GV ++ + + + ++D NRR++ ++ Sbjct: 362 DYLIKKGVGSSKL-SYTYYGMTKPIASNDTEEGRLINRRVEFEIK 405 >gi|262373228|ref|ZP_06066507.1| inner membrane lipoprotein yiaD [Acinetobacter junii SH205] gi|262313253|gb|EEY94338.1| inner membrane lipoprotein yiaD [Acinetobacter junii SH205] Length = 220 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 9/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L A GV G + I+ + FD + S P L K+ + Sbjct: 79 YLDNKEKKLRAQMAGTGVEVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYGTLNKVAQ 136 Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 LA + I + G+TD + N LS RA S L GVS RI G Sbjct: 137 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQARAQSVKNYLASQGVSSSRIDA-QGLG 192 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 ++ NRR++I + +Q Sbjct: 193 SSNPIASNATAAGKEQNRRVEISIYAKQ 220 >gi|260174346|ref|ZP_05760758.1| OmpA/MotB domain-containing protein [Bacteroides sp. D2] Length = 375 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 6/105 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ S + L KI ++ + + I+GHTD N LS RA + Y Sbjct: 275 FEFGKSAINKNSYAYLDKIAMLMQRTNLSVEIKGHTDNV---GKEDFNMELSRKRAKAVY 331 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+K GV ++ + + + ++D NRR++ ++ Sbjct: 332 DYLIKKGVGSSKL-SYTYYGMTKPIASNDTEEGRLINRRVEFEIK 375 >gi|256842297|ref|ZP_05547801.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256736181|gb|EEU49511.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 295 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 85/219 (38%), Gaps = 20/219 (9%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 ++ + +L RD+ ++ + N E L L ++K+ + ++R + Sbjct: 68 DDNDALNNRIAALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTIN 127 Query: 195 LAKKISSTLSGLVADNIV-----------KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + + + V + + + + +++ D+ +F S+ Sbjct: 128 ELQDMMNAQNAKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKL---LFQSGSAK 184 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 L K+ EVL ++ I GHTD+ P DNW LS+ RA S ++L K Sbjct: 185 VDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTK 244 Query: 302 -SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 GV+ +I G ++ S NRR +I+ Sbjct: 245 DYGVNPLQIQPC-GRGEFMPVADNETADGRSKNRRTEII 282 >gi|218514237|ref|ZP_03511077.1| outer membrane lipoprotein [Rhizobium etli 8C-3] Length = 141 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 10/142 (7%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A G+ I++++ FD P L + VL Sbjct: 1 DQQEAELRAQLEGTGISVTRNGDNIILNMPSNIT---FDVDQDAVKPGFYPTLNSVAIVL 57 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + +I + GHTD++ + N LS RA S L G+ + R+S + GF Sbjct: 58 RKFNRTLIDVNGHTDST---GSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAV-GFGPS 113 Query: 319 RLKIASDPM--NSANRRIDILV 338 + ++ + NRR++I + Sbjct: 114 QPVASNASEAGRAQNRRVEIQI 135 >gi|89053531|ref|YP_508982.1| hypothetical protein Jann_1040 [Jannaschia sp. CCS1] gi|88863080|gb|ABD53957.1| OmpA/MotB [Jannaschia sp. CCS1] Length = 799 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 94/291 (32%), Gaps = 16/291 (5%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 L + + + + + + ++++ + + Sbjct: 510 AASVASDLTALEAQLAAALAARQTTDAALADALTEAETRETLLAQANIELAEAETQSEQS 569 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + + + + S ++ +++ N L L+ E+ Sbjct: 570 ARQVALLNEQVAALRAQLGSLQSLLSLSEDRDEEAQVQIQALGSRLNTALAQLAAEERTR 629 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSI 243 + + + + L ++ + R G+ I + +F+ S+ Sbjct: 630 AELEAAEVERLAAEAQELERYRSEFFGRLRELLEGRDGVRIEGDRFVFSSEVLFEVGSAD 689 Query: 244 PLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAY 293 E + ++ + +L +I + GHTD +NW LS RA Sbjct: 690 LATEGLAQIENVAALLLEIAVDIPEAIDWIIRVDGHTDDQQLREGATYANNWELSQARAL 749 Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 + + + G+ R+ +GF HR +D +ANRRI++ + +R Sbjct: 750 AVVLYMSEELGIPPRRL-AATGFGEHRPIAPNDTDEGQAANRRIELKLTER 799 >gi|189468503|ref|ZP_03017288.1| hypothetical protein BACINT_04906 [Bacteroides intestinalis DSM 17393] gi|189436767|gb|EDV05752.1| hypothetical protein BACINT_04906 [Bacteroides intestinalis DSM 17393] Length = 299 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 65/164 (39%), Gaps = 9/164 (5%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + K + L +++ L+ ++ +K V + + + IS+ D ++ S Sbjct: 119 KQLVDTKSKSDSLNVVLTNNLTRSLSREELKEVDVKVLKGVVYISLADNM---LYKSGSY 175 Query: 243 IPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM 300 L KI +++ + + + G+TD P R+NW LS RA S Q L Sbjct: 176 EINERAGETLSKIAKIITDYKDYEVLVEGNTDNVPISRPNIRNNWDLSALRASSVVQALQ 235 Query: 301 KS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 GV R+S G + +D NRR I++ + Sbjct: 236 NQYGVDPKRLSAA-GRGEYNPLTDNDTELGKQRNRRTQIIITPK 278 >gi|149279859|ref|ZP_01885986.1| putative flagellar motor protein MotB [Pedobacter sp. BAL39] gi|149229449|gb|EDM34841.1| putative flagellar motor protein MotB [Pedobacter sp. BAL39] Length = 289 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 83/253 (32%), Gaps = 9/253 (3%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 S K + ++ Q Q ++ S +Q K ++ Sbjct: 22 SSKKYKDLEASYTQLQEKSRELNQKYQSGQQDLSGSSSRVKSLEEQIASEKANVAALQAA 81 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 S+ + + +K + K + L +++ L+ ++ ++ Sbjct: 82 LDKCLNSSSQGNVNISKLVDEINTSNKYIQHLVNTKNKSDSLNVVLTNNLTRSLSREEMR 141 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + + IS+ D ++ S L KI +++ I G+T Sbjct: 142 DVDVQVLKGVVYISLSDNM---LYKSGSYEISDVAGQTLAKIAKIIKDYQGYDVLIEGNT 198 Query: 273 DASPFRNIA-RDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNS- 329 D P R+NW LS RA S Q L V R++ G + +D Sbjct: 199 DNVPISQTNIRNNWDLSALRASSVVQALQNTYSVDPKRLTAG-GRGEYNPVAGNDSEAGK 257 Query: 330 -ANRRIDILVEDR 341 NRR I++ + Sbjct: 258 MKNRRTQIIITPK 270 >gi|149917198|ref|ZP_01905698.1| OmpA domain protein [Plesiocystis pacifica SIR-1] gi|149822114|gb|EDM81507.1| OmpA domain protein [Plesiocystis pacifica SIR-1] Length = 395 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 81/259 (31%), Gaps = 18/259 (6%) Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 D DE + + K G + +++ + + + Sbjct: 131 PDEAEDFDAFEDEDGCPDRDNDKDGVLDAA-EFENGVWTNNDQKDGVDCRNDPEDIDEFE 189 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD-N 210 ++ D + ++ ++ + P ++ L + I D Sbjct: 190 DEDGCPDPDNDQDGILDVDDKCPIDPEDIDQFEDEDGCPELDNDKDGILDVDDQCPLDPE 249 Query: 211 IVKGVLFETTRTGILISII----DQRNTPMFDKS-----SSIPLPETIVVLQKIGEVLAH 261 + G E + + + MFD S +L + VL Sbjct: 250 DIDGEEDEDGCPDLAVKVDPCAIKLDGKIMFDSGKYDLKSRKFADSNSKLLDDVYTVLNT 309 Query: 262 STEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + ++ I GHTD+ + +R N RLS +R S + L+ G+ RI G+ Sbjct: 310 NPDITIEIGGHTDS---KGSSRSNQRLSENRVKSVREYLVDKGIDGSRI-TFKGYGEDVP 365 Query: 321 KIASDPMNSA--NRRIDIL 337 + NRR++IL Sbjct: 366 VDTNRTKEGRENNRRVEIL 384 >gi|322435021|ref|YP_004217233.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] gi|321162748|gb|ADW68453.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] Length = 255 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 15/194 (7%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + K +TD S+N P+ A + RL+++ K Sbjct: 62 DQHSKTPPITTDGNSSLNLATAPIALPVPSAAESAEATEIRLKEVVK-----AQVEKKQL 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 V T G+++S+ R F S+ PE + VLQ + L + + + G Sbjct: 117 TSDAVSVRATGDGLVVSL---REAGFFASGSADVRPEALAVLQTVAAALPRQS--MRVEG 171 Query: 271 HTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDP-- 326 HTD P NW LS RA + ++L+ V ++S G A R + Sbjct: 172 HTDNIPIHTTQFATNWELSTARAATITRLLIAQNAVDPAQVSAA-GDAEFRPIADNATDA 230 Query: 327 MNSANRRIDILVED 340 + NRR+DI++ Sbjct: 231 GRAQNRRVDIILLK 244 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 49/173 (28%), Gaps = 5/173 (2%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 N W + YADF+T+L AFF+V++ D + + + Sbjct: 3 KKKHPEHVNHERWLVSYADFITLLFAFFVVLFASGQNDKRKQVMLAHAVQSAFMH----- 57 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 GIFD+ + + + + + + + E + Q + Sbjct: 58 NGIFDQHSKTPPITTDGNSSLNLATAPIALPVPSAAESAEATEIRLKEVVKAQVEKKQLT 117 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 + L ++ L L ++ R++ Sbjct: 118 SDAVSVRATGDGLVVSLREAGFFASGSADVRPEALAVLQTVAAALPRQSMRVE 170 >gi|229141242|ref|ZP_04269781.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26] gi|229198660|ref|ZP_04325361.1| OmpA/MotB domain protein [Bacillus cereus m1293] gi|228584819|gb|EEK42936.1| OmpA/MotB domain protein [Bacillus cereus m1293] gi|228642283|gb|EEK98575.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26] Length = 233 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 82/207 (39%), Gaps = 9/207 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +Q S K+ + K+ A +++ + +L Sbjct: 24 KQMAVAFRSELAGGTGNKEFLSDQKPNDEKELSASSLESEKIKKNAEAEVKQQEMNELKA 83 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + + T G+ ++I++ +FD + E++ + +++ Sbjct: 84 VQKGIDKYIEENRLSSSFKTDLTEKGLKVTILEN---VLFDSGKADVKLESLSIAKEMSN 140 Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314 +L + S I++ GHTD P N NW LS RA + QVL+++ + + S + G Sbjct: 141 LLVSASPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPGKFSAV-G 199 Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339 + +R +D + NRR+++ + Sbjct: 200 YGEYRSIAPNDTQEGKAKNRRVEVFIL 226 >gi|319955316|ref|YP_004166583.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319423976|gb|ADV51085.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 238 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 8/141 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + G GI + + FD + S+ + +L ++ +L Sbjct: 91 QAERIEEEIPGAEVTRVGEGINVVFNEDAG-VYFDTNKSVVKGTSATILDRLVGILKEYP 149 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I + GHTD+ A N LS RA S L G+S +R++ + + K Sbjct: 150 DSNILVEGHTDS---AGPADYNMNLSKQRAESVTSYLNTHGISSNRLTT-KWYGETQPKS 205 Query: 323 ASDPMN--SANRRIDILVEDR 341 + + NRR+++++ Sbjct: 206 DNSTTEGKAKNRRVEMVIVAS 226 >gi|285017932|ref|YP_003375643.1| hypothetical protein XALc_1141 [Xanthomonas albilineans GPE PC73] gi|283473150|emb|CBA15656.1| hypothetical protein XALc_1141 [Xanthomonas albilineans] Length = 231 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 10/149 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + L G+ I +++ D FD + S P+ L Sbjct: 85 AAIGNYQDRQERALRERTANTGIDVRRDGDNITLNLPDGIT---FDFNQSTLKPQFYSAL 141 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + L+ + +I + GHTD N RLS RA S L GV +RI Sbjct: 142 NGVAKTLSEYNQTMIEVVGHTDNI---GSDAVNQRLSEQRASSVAAYLTAQGVQPERIQT 198 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338 + G + + NRR++I V Sbjct: 199 L-GAGKKYPIADNSTEAGRAQNRRVEIRV 226 >gi|260062849|ref|YP_003195929.1| OmpA family protein [Robiginitalea biformata HTCC2501] gi|88784417|gb|EAR15587.1| OmpA family protein [Robiginitalea biformata HTCC2501] Length = 231 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 8/142 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + G + GI ++ + F + S ++ L K+ + Sbjct: 82 QAEKIEEELPGAEVKRVGEGINVTFTQDQGVH-FATNQSAIEGASVTTLNKLAGIFKEYP 140 Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 VI + GHTD+ N LS RA S L+ G+ +DR + + + + Sbjct: 141 KSVILVEGHTDS---AGPEDYNMSLSQRRAESVVNYLVAQGIDKDRF-TVRWYGETQPRA 196 Query: 323 ASDPMN--SANRRIDILVEDRQ 342 + + NRR+++ + + Sbjct: 197 DNSTAEGKAQNRRVEMGIIASE 218 >gi|83949920|ref|ZP_00958653.1| flagellar motor protein [Roseovarius nubinhibens ISM] gi|83837819|gb|EAP77115.1| flagellar motor protein [Roseovarius nubinhibens ISM] Length = 627 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 86/240 (35%), Gaps = 16/240 (6%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 + R E + + S+ +++ K+ N L Sbjct: 389 EQEAMTEAARREQALLNQQVQALRTQLGELQALLDDAVDRESSSSVQLQTLGKDLNVALA 448 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--RNT 234 L+ E+ + ++ L + L ++ + + G+ I + Sbjct: 449 RLAAEEKRRRELQEEKAKLLEAQKQDLEKYRSEFFGRLRDVLGAQDGVRIEGDRFVFSSE 508 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNIAR--DN 284 +F + E + K+ E+L VI + GHTD P N A DN Sbjct: 509 VLFAPGRAALSTEGRGEVAKVAEILRKVAGDIPPELDWVIRVDGHTDDVPIVNSAEFADN 568 Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 W LS RA S + +++S G+ DR+S +GF ++ D + NRRI++ ++ Sbjct: 569 WELSQARALSVVRYMIESLGIPPDRLSA-NGFGQYQPVAQGDSAEARAQNRRIELKFTEK 627 >gi|297569175|ref|YP_003690519.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296925090|gb|ADH85900.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 251 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 11/154 (7%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 ++ + I L +V E + I ++ F + + +L Sbjct: 87 EVREPIQQLFRELEDAGLVTVEEDEAGEVTVRIR-----DSVAFAFGRADLKEDFKALLD 141 Query: 254 KIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 ++GE+L S + + GHTD P NW LS R+ + + L++ + DR+ Sbjct: 142 QLGEILVTSQATMVVEGHTDNVPMRPGAPFSSNWALSAARSVAVVEYLLEHYEIPRDRL- 200 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +A R +D NRR++ + + Sbjct: 201 AAEAYADSRPVAPNDTAEGRAANRRVEFRIRPGE 234 >gi|258647767|ref|ZP_05735236.1| OmpA family protein [Prevotella tannerae ATCC 51259] gi|260852625|gb|EEX72494.1| OmpA family protein [Prevotella tannerae ATCC 51259] Length = 288 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 68/164 (41%), Gaps = 9/164 (5%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 ++ K + L +++ L+ ++++ ++ V + + + IS+ D ++ S Sbjct: 111 KQLVEAKSKSDSLNMVLTNNLTRSLSNDELREVDVKVLKGVVYISLADNM---LYKSGSY 167 Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLM 300 L KI +++ + + G+TD P R R+NW LS RA S L Sbjct: 168 EINSRAKETLSKIAKIIKDYRDYDVLVEGNTDPVPITRTNIRNNWDLSCLRASSVVLALQ 227 Query: 301 -KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 GV+ R++ G + ++ NRR I++ + Sbjct: 228 NDYGVNPARLTAA-GRGEYNPVTTNETEVGKQRNRRTQIIITPK 270 >gi|288800219|ref|ZP_06405677.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332432|gb|EFC70912.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039] Length = 283 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 9/160 (5%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + K + L +S+ L+ ++ +K V + + + IS+ D ++ S Sbjct: 111 EVKSKSDSLNMVLSNNLTRSLSKEELKEVDVQVLKGVVYISLADNM---LYKSGSYEIND 167 Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-G 303 L KI +++ + I G+TD P R+NW LS RA S Q L G Sbjct: 168 RAAETLSKIAKIITDYKDYDVLIEGNTDNVPIARENIRNNWDLSCLRASSVVQYLQTHYG 227 Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 V+ R++ G + ++ NRR I++ + Sbjct: 228 VNPKRLTAG-GRGEYNPIANNNTELGKQRNRRTQIIITPK 266 >gi|260494689|ref|ZP_05814819.1| peptidoglycan-associated lipoprotein [Fusobacterium sp. 3_1_33] gi|260197851|gb|EEW95368.1| peptidoglycan-associated lipoprotein [Fusobacterium sp. 3_1_33] Length = 166 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 7/144 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 ++++ + L E + I + D+ FD S+ P+ +L + + + Sbjct: 3 ANSIRINALEINKMEALKEEPPEEMTIVLDDRALN--FDFDKSVVKPQYNEMLTNLKDFI 60 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + ++I GHTD + N LS RA + L++ G+ RI I Sbjct: 61 EKNDYEVTIVGHTD---YIASNAYNMGLSKRRAEAVKTKLIELGLDPSRIVGIVPRGEEE 117 Query: 320 LKIASDP--MNSANRRIDILVEDR 341 + + NRR++ + R Sbjct: 118 PIADNATTEGRAKNRRVEFKLVKR 141 >gi|330504865|ref|YP_004381734.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] gi|328919151|gb|AEB59982.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] Length = 218 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290 F +S+ L + V + ++I GHTD++ N LS Sbjct: 110 PGNITFASNSADISSSFYPTLNSLVLVFKEFNKNGVNIVGHTDST---GSQELNQSLSQR 166 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA S L +GV RIS G + ++ + NRR++I + Sbjct: 167 RAQSVANYLTANGVPGQRISAY-GAGPSQPIASNATDAGRAQNRRVEINLRQ 217 >gi|257126323|ref|YP_003164437.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b] gi|257050262|gb|ACV39446.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b] Length = 215 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 FD +S + P+ L + VL + I + GHTD N LS++ Sbjct: 105 PENITFDLNSYVVKPQFRGTLDSVATVLKTYPDSTIIVSGHTDT---SGNDAINNPLSVN 161 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L G++ R+ G+ ++ + NRR++I + Q Sbjct: 162 RAASVASYLQSQGIASSRM-TYRGYGSKMPIASNATEAGRAQNRRVEIAIIANQ 214 >gi|149194324|ref|ZP_01871421.1| Thrombospondin type 3 repeat:OmpA/MotB [Caminibacter mediatlanticus TB-2] gi|149135499|gb|EDM23978.1| Thrombospondin type 3 repeat:OmpA/MotB [Caminibacter mediatlanticus TB-2] Length = 209 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + ++K+ E+L + I + GHTD A+ N +LS RA + Sbjct: 101 FDFNKWNVKKIYYPQIKKVAEILKANPNLKIEVAGHTDNI---GSAKYNLKLSQKRAEAV 157 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 ++L+ ++ +RI G+ + + + NRR++I+ Sbjct: 158 KKILVNVYHINPNRIVA-RGYGEKYPLVPNTTSTNRALNRRVEII 201 >gi|311747916|ref|ZP_07721701.1| OmpA family protein [Algoriphagus sp. PR1] gi|126575910|gb|EAZ80220.1| OmpA family protein [Algoriphagus sp. PR1] Length = 225 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 10/146 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + ++G E GI I+ + MFD + + L ++ E L Sbjct: 73 EMDKAAEELQRDLEGATVERVGEGIKITF---DSGLMFDVDKATLNSNSRDNLMELSETL 129 Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E + GHTDA+ N LS RAYS L G+ + R+ +I+ + + Sbjct: 130 KKYDETNILVEGHTDAT---GSDDYNLDLSRKRAYSVEDYLTNLGIQKSRL-EITAYGEN 185 Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342 + ++ NRR+++ + + Sbjct: 186 QPIATNETEAGRQQNRRVEVAIYANK 211 >gi|15804098|ref|NP_290137.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 EDL933] gi|15833691|ref|NP_312464.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. Sakai] gi|26250192|ref|NP_756232.1| putative outer membrane lipoprotein [Escherichia coli CFT073] gi|49176370|ref|YP_026228.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr. MG1655] gi|89110462|ref|AP_004242.1| predicted outer membrane lipoprotien [Escherichia coli str. K-12 substr. W3110] gi|110643800|ref|YP_671530.1| putative outer membrane lipoprotein [Escherichia coli 536] gi|157158823|ref|YP_001465027.1| putative outer membrane lipoprotein [Escherichia coli E24377A] gi|157163027|ref|YP_001460345.1| putative outer membrane lipoprotein [Escherichia coli HS] gi|168746904|ref|ZP_02771926.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113] gi|168753370|ref|ZP_02778377.1| OmpA family protein [Escherichia coli O157:H7 str. EC4401] gi|168759642|ref|ZP_02784649.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501] gi|168765965|ref|ZP_02790972.1| OmpA family protein [Escherichia coli O157:H7 str. EC4486] gi|168772488|ref|ZP_02797495.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196] gi|168779701|ref|ZP_02804708.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076] gi|168785422|ref|ZP_02810429.1| OmpA family protein [Escherichia coli O157:H7 str. EC869] gi|168797388|ref|ZP_02822395.1| OmpA family protein [Escherichia coli O157:H7 str. EC508] gi|170018219|ref|YP_001723173.1| putative outer membrane lipoprotein [Escherichia coli ATCC 8739] gi|170083060|ref|YP_001732380.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr. DH10B] gi|170680831|ref|YP_001745838.1| putative outer membrane lipoprotein [Escherichia coli SMS-3-5] gi|170766985|ref|ZP_02901438.1| OmpA family protein [Escherichia albertii TW07627] gi|188495948|ref|ZP_03003218.1| OmpA family protein [Escherichia coli 53638] gi|191165316|ref|ZP_03027159.1| OmpA family protein [Escherichia coli B7A] gi|191170332|ref|ZP_03031885.1| OmpA family protein [Escherichia coli F11] gi|193061844|ref|ZP_03042941.1| OmpA family protein [Escherichia coli E22] gi|193068535|ref|ZP_03049497.1| OmpA family protein [Escherichia coli E110019] gi|194427518|ref|ZP_03060067.1| OmpA family protein [Escherichia coli B171] gi|194435666|ref|ZP_03067769.1| OmpA family protein [Escherichia coli 101-1] gi|195935083|ref|ZP_03080465.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str. EC4024] gi|208808020|ref|ZP_03250357.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206] gi|208812888|ref|ZP_03254217.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045] gi|208819372|ref|ZP_03259692.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042] gi|209400986|ref|YP_002273038.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115] gi|209921016|ref|YP_002295100.1| putative outer membrane lipoprotein [Escherichia coli SE11] gi|215488837|ref|YP_002331268.1| putative outer membrane lipoprotein [Escherichia coli O127:H6 str. E2348/69] gi|217326256|ref|ZP_03442340.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588] gi|218556112|ref|YP_002389025.1| putative outer membrane lipoprotein [Escherichia coli IAI1] gi|218691843|ref|YP_002400055.1| putative outer membrane lipoprotein [Escherichia coli ED1a] gi|218697269|ref|YP_002404936.1| putative outer membrane lipoprotein [Escherichia coli 55989] gi|218702317|ref|YP_002409946.1| putative outer membrane lipoprotein [Escherichia coli IAI39] gi|218707187|ref|YP_002414706.1| putative outer membrane lipoprotein [Escherichia coli UMN026] gi|227883718|ref|ZP_04001523.1| outer membrane lipoprotein [Escherichia coli 83972] gi|238902640|ref|YP_002928436.1| putative outer membrane lipoprotein [Escherichia coli BW2952] gi|254795509|ref|YP_003080346.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str. TW14359] gi|256020901|ref|ZP_05434766.1| putative outer membrane lipoprotein [Shigella sp. D9] gi|256025721|ref|ZP_05439586.1| putative outer membrane lipoprotein [Escherichia sp. 4_1_40B] gi|260846733|ref|YP_003224511.1| putative outer membrane lipoprotein [Escherichia coli O103:H2 str. 12009] gi|260858052|ref|YP_003231943.1| putative outer membrane lipoprotein [Escherichia coli O26:H11 str. 11368] gi|260870283|ref|YP_003236685.1| putative outer membrane lipoprotein [Escherichia coli O111:H- str. 11128] gi|261224871|ref|ZP_05939152.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. FRIK2000] gi|261254230|ref|ZP_05946763.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str. FRIK966] gi|291284929|ref|YP_003501747.1| Inner membrane lipoprotein yiaD precursor [Escherichia coli O55:H7 str. CB9615] gi|293407175|ref|ZP_06651099.1| outer membrane lipoprotein [Escherichia coli FVEC1412] gi|293417001|ref|ZP_06659638.1| outer membrane lipoprotein [Escherichia coli B185] gi|293453862|ref|ZP_06664281.1| outer membrane lipoprotein [Escherichia coli B088] gi|298382924|ref|ZP_06992519.1| outer membrane lipoprotein [Escherichia coli FVEC1302] gi|300815222|ref|ZP_07095447.1| OmpA family protein [Escherichia coli MS 107-1] gi|300822046|ref|ZP_07102189.1| OmpA family protein [Escherichia coli MS 119-7] gi|300898736|ref|ZP_07117047.1| OmpA family protein [Escherichia coli MS 198-1] gi|300920432|ref|ZP_07136866.1| OmpA family protein [Escherichia coli MS 115-1] gi|300925626|ref|ZP_07141493.1| OmpA family protein [Escherichia coli MS 182-1] gi|300937157|ref|ZP_07152011.1| OmpA family protein [Escherichia coli MS 21-1] gi|300971377|ref|ZP_07171446.1| OmpA family protein [Escherichia coli MS 45-1] gi|300976951|ref|ZP_07173686.1| OmpA family protein [Escherichia coli MS 200-1] gi|301026191|ref|ZP_07189658.1| OmpA family protein [Escherichia coli MS 69-1] gi|301028182|ref|ZP_07191452.1| OmpA family protein [Escherichia coli MS 196-1] gi|301304604|ref|ZP_07210713.1| OmpA family protein [Escherichia coli MS 124-1] gi|301646016|ref|ZP_07245922.1| OmpA family protein [Escherichia coli MS 146-1] gi|307140242|ref|ZP_07499598.1| putative outer membrane lipoprotein [Escherichia coli H736] gi|307314313|ref|ZP_07593920.1| OmpA/MotB domain protein [Escherichia coli W] gi|309796193|ref|ZP_07690604.1| OmpA family protein [Escherichia coli MS 145-7] gi|312968105|ref|ZP_07782316.1| inner membrane lipoprotein yiaD [Escherichia coli 2362-75] gi|312972173|ref|ZP_07786347.1| inner membrane lipoprotein yiaD [Escherichia coli 1827-70] gi|331644263|ref|ZP_08345392.1| inner membrane lipoprotein YiaD [Escherichia coli H736] gi|331655189|ref|ZP_08356188.1| inner membrane lipoprotein YiaD [Escherichia coli M718] gi|331659868|ref|ZP_08360806.1| inner membrane lipoprotein YiaD [Escherichia coli TA206] gi|331665175|ref|ZP_08366076.1| inner membrane lipoprotein YiaD [Escherichia coli TA143] gi|331670386|ref|ZP_08371225.1| inner membrane lipoprotein YiaD [Escherichia coli TA271] gi|331675043|ref|ZP_08375800.1| inner membrane lipoprotein YiaD [Escherichia coli TA280] gi|331679633|ref|ZP_08380303.1| inner membrane lipoprotein YiaD [Escherichia coli H591] gi|331685215|ref|ZP_08385801.1| inner membrane lipoprotein YiaD [Escherichia coli H299] gi|332282119|ref|ZP_08394532.1| OmpA family protein [Shigella sp. D9] gi|54042327|sp|P37665|YIAD_ECOLI RecName: Full=Inner membrane lipoprotein yiaD; Flags: Precursor gi|12518287|gb|AAG58701.1|AE005582_4 putative outer membrane protein [Escherichia coli O157:H7 str. EDL933] gi|26110621|gb|AAN82806.1|AE016768_224 Hypothetical lipoprotein yiaD precursor [Escherichia coli CFT073] gi|13363911|dbj|BAB37860.1| putative outer membrane protein [Escherichia coli O157:H7 str. Sakai] gi|48994946|gb|AAT48190.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr. MG1655] gi|85676493|dbj|BAE77743.1| predicted outer membrane lipoprotien [Escherichia coli str. K12 substr. W3110] gi|110345392|gb|ABG71629.1| putative outer membrane lipoprotein [Escherichia coli 536] gi|157068707|gb|ABV07962.1| OmpA family protein [Escherichia coli HS] gi|157080853|gb|ABV20561.1| OmpA family protein [Escherichia coli E24377A] gi|169753147|gb|ACA75846.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739] gi|169890895|gb|ACB04602.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12 substr. DH10B] gi|170124423|gb|EDS93354.1| OmpA family protein [Escherichia albertii TW07627] gi|170518549|gb|ACB16727.1| OmpA family protein [Escherichia coli SMS-3-5] gi|187771758|gb|EDU35602.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196] gi|188018309|gb|EDU56431.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113] gi|188491147|gb|EDU66250.1| OmpA family protein [Escherichia coli 53638] gi|189002241|gb|EDU71227.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076] gi|189358800|gb|EDU77219.1| OmpA family protein [Escherichia coli O157:H7 str. EC4401] gi|189364720|gb|EDU83139.1| OmpA family protein [Escherichia coli O157:H7 str. EC4486] gi|189369665|gb|EDU88081.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501] gi|189374556|gb|EDU92972.1| OmpA family protein [Escherichia coli O157:H7 str. EC869] gi|189380056|gb|EDU98472.1| OmpA family protein [Escherichia coli O157:H7 str. EC508] gi|190904718|gb|EDV64424.1| OmpA family protein [Escherichia coli B7A] gi|190909140|gb|EDV68726.1| OmpA family protein [Escherichia coli F11] gi|192932634|gb|EDV85231.1| OmpA family protein [Escherichia coli E22] gi|192958186|gb|EDV88627.1| OmpA family protein [Escherichia coli E110019] gi|194414558|gb|EDX30831.1| OmpA family protein [Escherichia coli B171] gi|194425209|gb|EDX41193.1| OmpA family protein [Escherichia coli 101-1] gi|208727821|gb|EDZ77422.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206] gi|208734165|gb|EDZ82852.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045] gi|208739495|gb|EDZ87177.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042] gi|209162386|gb|ACI39819.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115] gi|209755238|gb|ACI75931.1| putative outer membrane protein [Escherichia coli] gi|209755240|gb|ACI75932.1| putative outer membrane protein [Escherichia coli] gi|209755242|gb|ACI75933.1| putative outer membrane protein [Escherichia coli] gi|209755244|gb|ACI75934.1| putative outer membrane protein [Escherichia coli] gi|209755246|gb|ACI75935.1| putative outer membrane protein [Escherichia coli] gi|209914275|dbj|BAG79349.1| conserved hypothetical protein [Escherichia coli SE11] gi|215266909|emb|CAS11352.1| predicted outer membrane lipoprotien [Escherichia coli O127:H6 str. E2348/69] gi|217322477|gb|EEC30901.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588] gi|218354001|emb|CAV00488.1| putative outer membrane lipoprotien [Escherichia coli 55989] gi|218362880|emb|CAR00514.1| putative outer membrane lipoprotien [Escherichia coli IAI1] gi|218372303|emb|CAR20168.1| putative outer membrane lipoprotien [Escherichia coli IAI39] gi|218429407|emb|CAR10226.1| putative outer membrane lipoprotien [Escherichia coli ED1a] gi|218434284|emb|CAR15206.1| putative outer membrane lipoprotien [Escherichia coli UMN026] gi|227839298|gb|EEJ49764.1| outer membrane lipoprotein [Escherichia coli 83972] gi|238862715|gb|ACR64713.1| predicted outer membrane lipoprotein [Escherichia coli BW2952] gi|254594909|gb|ACT74270.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. TW14359] gi|257756701|dbj|BAI28203.1| predicted outer membrane lipoprotein [Escherichia coli O26:H11 str. 11368] gi|257761880|dbj|BAI33377.1| predicted outer membrane lipoprotein [Escherichia coli O103:H2 str. 12009] gi|257766639|dbj|BAI38134.1| predicted outer membrane lipoprotein [Escherichia coli O111:H- str. 11128] gi|260447432|gb|ACX37854.1| OmpA/MotB domain protein [Escherichia coli DH1] gi|284923586|emb|CBG36682.1| putative outer membrane protein [Escherichia coli 042] gi|290764802|gb|ADD58763.1| Inner membrane lipoprotein yiaD precursor [Escherichia coli O55:H7 str. CB9615] gi|291321988|gb|EFE61419.1| outer membrane lipoprotein [Escherichia coli B088] gi|291425986|gb|EFE99020.1| outer membrane lipoprotein [Escherichia coli FVEC1412] gi|291431577|gb|EFF04562.1| outer membrane lipoprotein [Escherichia coli B185] gi|298276760|gb|EFI18278.1| outer membrane lipoprotein [Escherichia coli FVEC1302] gi|299878738|gb|EFI86949.1| OmpA family protein [Escherichia coli MS 196-1] gi|300308421|gb|EFJ62941.1| OmpA family protein [Escherichia coli MS 200-1] gi|300357615|gb|EFJ73485.1| OmpA family protein [Escherichia coli MS 198-1] gi|300395632|gb|EFJ79170.1| OmpA family protein [Escherichia coli MS 69-1] gi|300411301|gb|EFJ94839.1| OmpA family protein [Escherichia coli MS 45-1] gi|300412565|gb|EFJ95875.1| OmpA family protein [Escherichia coli MS 115-1] gi|300418280|gb|EFK01591.1| OmpA family protein [Escherichia coli MS 182-1] gi|300457770|gb|EFK21263.1| OmpA family protein [Escherichia coli MS 21-1] gi|300525409|gb|EFK46478.1| OmpA family protein [Escherichia coli MS 119-7] gi|300532114|gb|EFK53176.1| OmpA family protein [Escherichia coli MS 107-1] gi|300840082|gb|EFK67842.1| OmpA family protein [Escherichia coli MS 124-1] gi|301075768|gb|EFK90574.1| OmpA family protein [Escherichia coli MS 146-1] gi|306906028|gb|EFN36548.1| OmpA/MotB domain protein [Escherichia coli W] gi|307555658|gb|ADN48433.1| putative outer membrane protein [Escherichia coli ABU 83972] gi|308120254|gb|EFO57516.1| OmpA family protein [Escherichia coli MS 145-7] gi|310334550|gb|EFQ00755.1| inner membrane lipoprotein yiaD [Escherichia coli 1827-70] gi|312287364|gb|EFR15273.1| inner membrane lipoprotein yiaD [Escherichia coli 2362-75] gi|315062837|gb|ADT77164.1| predicted outer membrane lipoprotein [Escherichia coli W] gi|315138128|dbj|BAJ45287.1| inner membrane lipoprotein yiaD precursor [Escherichia coli DH1] gi|315254081|gb|EFU34049.1| OmpA family protein [Escherichia coli MS 85-1] gi|315294130|gb|EFU53482.1| OmpA family protein [Escherichia coli MS 153-1] gi|315300095|gb|EFU59333.1| OmpA family protein [Escherichia coli MS 16-3] gi|315618412|gb|EFU98999.1| inner membrane lipoprotein yiaD [Escherichia coli 3431] gi|320191391|gb|EFW66041.1| putative outer membrane protein [Escherichia coli O157:H7 str. EC1212] gi|320201426|gb|EFW76007.1| putative outer membrane protein [Escherichia coli EC4100B] gi|320639873|gb|EFX09467.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str. G5101] gi|320645036|gb|EFX14060.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str. 493-89] gi|320650303|gb|EFX18786.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str. H 2687] gi|320655878|gb|EFX23801.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661658|gb|EFX29073.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str. USDA 5905] gi|320666682|gb|EFX33665.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str. LSU-61] gi|323153881|gb|EFZ40115.1| inner membrane lipoprotein yiaD [Escherichia coli EPECa14] gi|323160679|gb|EFZ46618.1| inner membrane lipoprotein yiaD [Escherichia coli E128010] gi|323174210|gb|EFZ59838.1| inner membrane lipoprotein yiaD [Escherichia coli LT-68] gi|323179484|gb|EFZ65051.1| inner membrane lipoprotein yiaD [Escherichia coli 1180] gi|323182708|gb|EFZ68110.1| inner membrane lipoprotein yiaD [Escherichia coli 1357] gi|323376572|gb|ADX48840.1| OmpA/MotB domain protein [Escherichia coli KO11] gi|323934746|gb|EGB31133.1| OmpA family protein [Escherichia coli E1520] gi|323939549|gb|EGB35757.1| OmpA family protein [Escherichia coli E482] gi|323944551|gb|EGB40622.1| OmpA family protein [Escherichia coli H120] gi|323959435|gb|EGB55094.1| OmpA family protein [Escherichia coli H489] gi|323966022|gb|EGB61463.1| OmpA family protein [Escherichia coli M863] gi|323971357|gb|EGB66598.1| OmpA family protein [Escherichia coli TA007] gi|323975035|gb|EGB70144.1| OmpA family protein [Escherichia coli TW10509] gi|324007339|gb|EGB76558.1| OmpA family protein [Escherichia coli MS 57-2] gi|324014213|gb|EGB83432.1| OmpA family protein [Escherichia coli MS 60-1] gi|324021134|gb|EGB90353.1| OmpA family protein [Escherichia coli MS 117-3] gi|324116568|gb|EGC10485.1| OmpA family protein [Escherichia coli E1167] gi|326337443|gb|EGD61278.1| putative outer membrane protein [Escherichia coli O157:H7 str. 1044] gi|326339968|gb|EGD63775.1| putative outer membrane protein [Escherichia coli O157:H7 str. 1125] gi|327251203|gb|EGE62896.1| inner membrane lipoprotein yiaD [Escherichia coli STEC_7v] gi|331036557|gb|EGI08783.1| inner membrane lipoprotein YiaD [Escherichia coli H736] gi|331047204|gb|EGI19282.1| inner membrane lipoprotein YiaD [Escherichia coli M718] gi|331053083|gb|EGI25116.1| inner membrane lipoprotein YiaD [Escherichia coli TA206] gi|331057685|gb|EGI29671.1| inner membrane lipoprotein YiaD [Escherichia coli TA143] gi|331062448|gb|EGI34368.1| inner membrane lipoprotein YiaD [Escherichia coli TA271] gi|331067952|gb|EGI39350.1| inner membrane lipoprotein YiaD [Escherichia coli TA280] gi|331072805|gb|EGI44130.1| inner membrane lipoprotein YiaD [Escherichia coli H591] gi|331077586|gb|EGI48798.1| inner membrane lipoprotein YiaD [Escherichia coli H299] gi|332104471|gb|EGJ07817.1| OmpA family protein [Shigella sp. D9] gi|332345519|gb|AEE58853.1| inner membrane lipoprotein YiaD [Escherichia coli UMNK88] Length = 219 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|262384794|ref|ZP_06077926.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262293510|gb|EEY81446.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 277 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 85/219 (38%), Gaps = 20/219 (9%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 ++ + +L RD+ ++ + N E L L ++K+ + ++R + Sbjct: 50 DDNDALNNRIAALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTIN 109 Query: 195 LAKKISSTLSGLVADNIV-----------KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + + + V + + + + +++ D+ +F S+ Sbjct: 110 ELQDMMNAQNEKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKL---LFQSGSAK 166 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 L K+ EVL ++ I GHTD+ P DNW LS+ RA S ++L K Sbjct: 167 VDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTK 226 Query: 302 -SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 GV+ +I G ++ S NRR +I+ Sbjct: 227 DYGVNPLQIQPC-GRGEFMPVADNETADGRSKNRRTEII 264 >gi|260599847|ref|YP_003212418.1| putative outer membrane lipoprotein [Cronobacter turicensis z3032] gi|260219024|emb|CBA34379.1| Inner membrane lipoprotein yiaD [Cronobacter turicensis z3032] Length = 220 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD S + P L + Sbjct: 80 YMDVQEAKLRQKMQGTGVSVTRSGDNIILNM---PNNVTFDSSQANLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N +LS RA S L+ GV+ +RI + SG Sbjct: 137 VLKEYPKTAVNVVGYTDST---GGQALNMKLSQQRAESVASALITQGVAANRI-RTSGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPVASNSTEEGKAQNRRVEITL 216 >gi|92113921|ref|YP_573849.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043] gi|91797011|gb|ABE59150.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043] Length = 294 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ E +L + L+ + + + G+TD+ A N LS RA S Sbjct: 192 FEFDSATLTSEAENILDDVAAKLSSNESVDVRLEGYTDSV---GSASYNKDLSQRRADSV 248 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GV+ D I+ G+ ++ + NRR+++ Sbjct: 249 KEYLVSKGVNADSITTY-GYGEQNPIATNETAEGRAENRRVEL 290 >gi|83945760|ref|ZP_00958104.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633] gi|83850850|gb|EAP88711.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633] Length = 217 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 53/145 (36%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + GV + + + F +S+ VL + Sbjct: 75 NYMDRQENAFRERLRGSGVTVRRVGNDLYLVM---PGDVTFATNSAQIDQRFGPVLNDVA 131 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +VL + + GH D+ A N LS RA S L+ GV DR+ ++G Sbjct: 132 DVLMTYPATYVDVIGHADSV---GDASYNQTLSERRASSVAAELIARGVMRDRLY-VAGM 187 Query: 316 AHHRLKIASDP--MNSANRRIDILV 338 + ++D +ANRR++I + Sbjct: 188 GESQPIASNDTDSGRAANRRVEIKI 212 >gi|253698707|ref|YP_003019896.1| OmpA/MotB domain protein [Geobacter sp. M21] gi|251773557|gb|ACT16138.1| OmpA/MotB domain protein [Geobacter sp. M21] Length = 333 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + S P+ L+ + + L +I GHTD+ N +LS RA S Sbjct: 229 FDTNKSDIKPQYHDELKALADFLKEFPNASGTIEGHTDSV---GDKAANMKLSQRRADSV 285 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRID 335 + L+ GV+ +R+ + GF + + NRRI+ Sbjct: 286 RKYLVDRFGVAPERVKAV-GFGPTKPAADNKTAAGKQKNRRIE 327 >gi|108757075|ref|YP_633305.1| OmpA family protein [Myxococcus xanthus DK 1622] gi|17863963|gb|AAL46989.1|AF448145_1 unknown [Myxococcus xanthus] gi|108460955|gb|ABF86140.1| OmpA family protein [Myxococcus xanthus DK 1622] Length = 249 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + S + L + + + + +++ GH D N +LS RA S Sbjct: 150 FGFNESGLSADAQQRLSDLAQCMKTAPGRVTLAGHADER---GTEEYNLQLSNRRAASVK 206 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 + L GV ++ + G+ R ++ ++ NRR++ Sbjct: 207 RYLTDLGVPASQLGTV-GYGETRPVNSASSEDAWSENRRVEF 247 >gi|187919624|ref|YP_001888655.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans PsJN] gi|187718062|gb|ACD19285.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 320 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 89/275 (32%), Gaps = 16/275 (5%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS---VDLKIGSTNQKKQYQRL 127 P + + G + +I + + +G + + Sbjct: 49 PPAASASVGNAGPAVNTAGLASGTTGAGTGAITAAPPPANATPGQVVVGGKVPDEATKAA 108 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC---KSTDLEKSINKEENYFLPPLSKEKIL 184 + + + + + K + + + + Sbjct: 109 VLARLRDTYGAANVVDQIEVADVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQIDVKG 168 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + + + Q LA +++ L+ I G+ + G+L + R F+ S+ Sbjct: 169 EVHNESQRQQLASDMANALNPTYT--IKNGLRVSASEQGLLDQTLANRTIE-FETGSATL 225 Query: 245 LPETIVVL-QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 P+ +L Q ++ +T+ ++I GHTD N LS RA + L+ G Sbjct: 226 TPQGRAILDQMAAAMVKMTTKTVAIIGHTDN---SGNRTSNIALSQARADAVKGYLVAKG 282 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 + ++S +G + ++D + NRRI+ Sbjct: 283 IPPQQLST-TGVGPDQPIASNDTTDGRARNRRIEF 316 >gi|259417312|ref|ZP_05741231.1| OmpA/MotB domain protein [Silicibacter sp. TrichCH4B] gi|259346218|gb|EEW58032.1| OmpA/MotB domain protein [Silicibacter sp. TrichCH4B] Length = 519 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 56/149 (37%), Gaps = 8/149 (5%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 ++ + L ++ + + T +LI + + F S + ++ + Sbjct: 375 QLERLSAALESELETGQIELDRTNDWVLIRVSEALR---FRSGSEDLTSDIDSLIASAAK 431 Query: 258 VLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L I + GHTD+ P R + N +LS RA + +L + DRI + G Sbjct: 432 ALNAEQGPIRVVGHTDSVPMSGRGRFKSNEQLSKARAQTVADLLAAQLEAPDRI-TVEGK 490 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQ 342 + + NRR++IL+ Sbjct: 491 GPVDPIADNGTREGRARNRRVEILIPREN 519 >gi|261417296|ref|YP_003250979.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373752|gb|ACX76497.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325429|gb|ADL24630.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 659 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ + L I E ++ + ++GHTD + + N +LS DRA + Sbjct: 556 FKTASARLTKSSYGTLDDIAELMIKIPEANLEVQGHTDN---KGSEKRNKKLSEDRAAAV 612 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 + L+K GV++DR+ + +G+ + + + NRR++++ Sbjct: 613 VKYLVKKGVAKDRL-RAAGYGSEKPIADNTDAAGRAQNRRVELV 655 >gi|229588770|ref|YP_002870889.1| putative lipoprotein [Pseudomonas fluorescens SBW25] gi|229360636|emb|CAY47494.1| putative lipoprotein [Pseudomonas fluorescens SBW25] Length = 261 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 75/238 (31%), Gaps = 11/238 (4%) Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 + + + + L+ + + + D + + + Sbjct: 21 STPPNANLENARTNFSALQTNPQATKLAALETKDASEWLDKADKAYRDKEDEKKVDQLAY 80 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + + + + + K D + + + + T G L++ Sbjct: 81 LTNQRVEVAKDTIVLRESEAKLKNAGDERARALLDARDAQIKQLQDSLNAKQTDRGTLVT 140 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 D +F + S +V + K+ + L + + + G+TD++ N Sbjct: 141 FGD----VLFATNKSDLKSSGLVNITKLAQFLRDNPDRKVIVEGYTDST---GSDSYNQS 193 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 LS RA S + L + GV RI G+ + + NRR+++ + + Sbjct: 194 LSERRAASVQRALAQQGVDISRIVT-QGYGKEYPVADNGSVSGRAMNRRVEVTISNDN 250 >gi|261414988|ref|YP_003248671.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371444|gb|ACX74189.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326246|gb|ADL25447.1| ompA family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 756 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 73/245 (29%), Gaps = 15/245 (6%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 D + G + + DS Sbjct: 413 DTDEDTVPDYKDMCPETPKGVKVDSVGCPLDTDEDTVPDYKDMCPETPKGVKVDSVGCPL 472 Query: 157 LCKSTDLEKSINKEENYFL-PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + +K + + + K + D K +TL G+ + + Sbjct: 473 DSDKDGVFDGPDKCPDTPEGVAVDADGCPLDTDKDGVPDYRDKCPNTLPGIQVNKRGCPL 532 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDA 274 + + I F+ S+ L + L I +L EV ++GHTD Sbjct: 533 RRKEDLDYLKKGIQ-------FEFDSAKLLKSSYPTLDDIIALLEKIPEVKLEVQGHTD- 584 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANR 332 N +LS DRA+S G++ DR+ I GF + D + NR Sbjct: 585 --IVGTEDYNQKLSEDRAHSVTDYFQSKGIAADRLRAI-GFGTRMPLADNVTDEGRAKNR 641 Query: 333 RIDIL 337 R++++ Sbjct: 642 RVELI 646 >gi|150006781|ref|YP_001301524.1| putative flagellar motor protein MotB [Parabacteroides distasonis ATCC 8503] gi|149935205|gb|ABR41902.1| putative flagellar motor protein MotB [Parabacteroides distasonis ATCC 8503] Length = 277 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 85/219 (38%), Gaps = 20/219 (9%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 ++ + +L RD+ ++ + N E L L ++K+ + ++R + Sbjct: 50 DDNDALNNRIAALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTIN 109 Query: 195 LAKKISSTLSGLVADNIV-----------KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + + + V + + + + +++ D+ +F S+ Sbjct: 110 ELQDMMNAQNAKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKL---LFQSGSAK 166 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 L K+ EVL ++ I GHTD+ P DNW LS+ RA S ++L K Sbjct: 167 VDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTK 226 Query: 302 -SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 GV+ +I G ++ S NRR +I+ Sbjct: 227 DYGVNPLQIQPC-GRGEFMPVADNETADGRSKNRRTEII 264 >gi|16799769|ref|NP_470037.1| hypothetical protein lin0694 [Listeria innocua Clip11262] gi|16413146|emb|CAC95926.1| motB [Listeria innocua Clip11262] gi|313620085|gb|EFR91593.1| chemotaxis protein MotB [Listeria innocua FSL S4-378] Length = 275 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 88/225 (39%), Gaps = 14/225 (6%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +Q I + + D + K+ + + + + Sbjct: 47 EQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAA 106 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 +L + +++++ K+I S ++ +++ + + + G+LI+I D +F S Sbjct: 107 ALLKKQNEEKIEAFKKQIDSYIAA---EHLGAKITTKYSDEGLLITIRDD---ILFQSGS 160 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV 298 + + + ++IGE+ A + + GHTD P NW LS+ RA + + Sbjct: 161 AELSADKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEA 220 Query: 299 LMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 +++ V+ S G+ R +D NRR++I+V Sbjct: 221 IIQENSEVNPGEFSA-RGYGEFRPVAKNDIATNREKNRRVEIMVR 264 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 71/209 (33%), Gaps = 1/209 (0%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ + +W I Y+D +T+L+A F+V++ ++ D + + F + Sbjct: 3 KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 ++ ++ P+ + N + +++E K + + + + +N + + Sbjct: 63 GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKK 122 Query: 139 QSEHCKNSLT-RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q + + K + + + LS +K K L K Sbjct: 123 QIDSYIAAEHLGAKITTKYSDEGLLITIRDDILFQSGSAELSADKREIAKEIGELFAQGK 182 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILI 226 + DN+ ++ + + Sbjct: 183 GTMEGIVSGHTDNVPISTSIYSSNWELSV 211 >gi|268680520|ref|YP_003304951.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268618551|gb|ACZ12916.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 335 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P + +QK+ + + + + GHTD+ + N +LS RA + Sbjct: 233 FDFDKSVVKPAFMPEIQKVADFMKQNPGYSVVLEGHTDS---KGSDAYNQKLSDSRAKAV 289 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 + L GV+ +++ + + +D + NRR+D Sbjct: 290 AKALSNLGVAAAKVTT-EAYGESKPVATNDTEAGRAENRRVD 330 >gi|229158119|ref|ZP_04286188.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342] gi|228625348|gb|EEK82106.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342] Length = 234 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 36 GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 95 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 96 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLSIAKEMSNLLVSASPR 149 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + + S + G+ +R Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPGKFSAV-GYGEYRAIA 208 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227 >gi|146309839|ref|YP_001174913.1| putative outer membrane lipoprotein [Enterobacter sp. 638] gi|145316715|gb|ABP58862.1| OmpA/MotB domain protein [Enterobacter sp. 638] Length = 220 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMQGTGVSVTRNGDNIILNMPSNVT---FDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL ++ +++ G+TD++ N RLS RA S L+ GV+ +RI + SG Sbjct: 137 VLKEYSKTAVNVIGYTDST---GSQDLNMRLSQQRADSVASSLITQGVAANRI-RTSGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 +++ + NRR++I + Sbjct: 193 PANPIASNNTAEGKAQNRRVEITL 216 >gi|90416505|ref|ZP_01224436.1| ompA family protein [marine gamma proteobacterium HTCC2207] gi|90331704|gb|EAS46932.1| ompA family protein [marine gamma proteobacterium HTCC2207] Length = 220 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 62/200 (31%), Gaps = 10/200 (5%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + + + K ++ + K + + + + Sbjct: 24 DPYTGEQKTTKTAIGASIGAGVGAVVAYLDNKDEDSRKRNKRILAAAGGGAAIGYYMDAQ 83 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + L GV E I + + F +S+ VL + VL Sbjct: 84 EAKLRQQLRGSGVSVERVGDNINLIM---PGNITFASNSADINASFYSVLDSVALVLEEY 140 Query: 263 TEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 + + + GHTD+ A N LS RA S L+ + R+ + GF + Sbjct: 141 DKTLVVVAGHTDSD---GGAAFNEDLSERRAQSVSGYLVSQSILPIRLETV-GFGERQPI 196 Query: 322 IASDPMNSA--NRRIDILVE 339 +D NRR++I + Sbjct: 197 AGNDSAAGKQLNRRVEITLL 216 >gi|326799764|ref|YP_004317583.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] gi|326550528|gb|ADZ78913.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] Length = 169 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSL 289 + +F +SS + V ++ + + + I I GHTD++ A N LS Sbjct: 61 ESDVLFATNSSYLSEKAKVTMKNMVAYINKNYPNAQIQINGHTDST---GEADYNQWLSE 117 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 RA S + G++ I G+ + + NRR+++++ Sbjct: 118 KRAASVKNYAVSIGLNGSNIKT-KGYGKSKPVATNSTADGRQKNRRVEVIILK 169 >gi|313112366|ref|ZP_07798128.1| hypothetical protein PA39016_004320000 [Pseudomonas aeruginosa 39016] gi|310884630|gb|EFQ43224.1| hypothetical protein PA39016_004320000 [Pseudomonas aeruginosa 39016] Length = 372 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 7/136 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L D + V E +++I +F +S+ E +L +I + L Sbjct: 235 LADDIKAQRVAVEDAVDRSVVTIRGDE---LFASASASVRDEFQPLLLRIADALRKVKGQ 291 Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + + GH+D P NW+LS RA +L + R + G + + Sbjct: 292 VLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTA-EGRSDTEPVATN 350 Query: 325 DPM--NSANRRIDILV 338 + NRR++I V Sbjct: 351 ASAEGRARNRRVEITV 366 >gi|205374484|ref|ZP_03227280.1| flagellar motor protein MotS [Bacillus coahuilensis m4-4] Length = 211 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 61/173 (35%), Gaps = 6/173 (3%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 ++ + + L + ++L + + L + + + Sbjct: 34 PSASPEVEKEDDMVQKELEDNDAPPNTDAGEPQTKEELDQLLDEIQQYLDENKLNDVAVA 93 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277 T G+++ + +Q +F +++ + + L K+ E+L+ +I I GHTD P Sbjct: 94 SRTERGVVLVLQEQ---VLFQSGNAVIISDAYPFLDKVAELLSSIPNMIKIEGHTDNRPI 150 Query: 278 RNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN 328 NW LS R+ + + + R + G+ R +D Sbjct: 151 STSVFPSNWELSAARSSGVIRYFISNHQLDPTRFIAV-GYGDTRPLAPNDSAE 202 >gi|330810957|ref|YP_004355419.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379065|gb|AEA70415.1| putative lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 269 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 89/244 (36%), Gaps = 13/244 (5%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 + + + Q + + N+ + ++ D + Sbjct: 24 QRSEAALEQASTDFQKVKEDANVLRAAPRDVIRAGESLARADRLSSYWGSGEDVQHYAYL 83 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + + ++L +R +L+ +++ L ++ + + + + + Sbjct: 84 SQRYSAIAREHSNQVLNEERAAKLELERQRLQLALRESKLLSVQQQGKWLEEQIMAMATT 143 Query: 229 IDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIA 281 R M FD + V+ KI + L + V+ I G+TD++ Sbjct: 144 QTDRGLVMTLGDVLFDTGEAELKNSANRVVLKIVQFLQLNPKRVVRIEGYTDST---GGK 200 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 ++N +LS DRA + VL+ GV E RI ++ G+ + + NRR++I+ Sbjct: 201 QENLKLSRDRAQAVADVLVDLGVDEKRI-QVEGYGDQYPVDVNASERGRAQNRRVEIVFS 259 Query: 340 DRQG 343 D +G Sbjct: 260 DEKG 263 >gi|254038735|ref|ZP_04872791.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|226839241|gb|EEH71264.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|309703955|emb|CBJ03298.1| putative outer membrane protein [Escherichia coli ETEC H10407] Length = 219 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|148975688|ref|ZP_01812519.1| outer membrane protein [Vibrionales bacterium SWAT-3] gi|145964761|gb|EDK30013.1| outer membrane protein [Vibrionales bacterium SWAT-3] Length = 355 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 + + F +S+ E +Q I EVL + ++I GHTD++ A N +S Sbjct: 228 ESFSQGTFATNSTELSDEGKAAVQPIVEVLQTYPQSTVNIVGHTDST---GAAEYNMMIS 284 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA + + + G+ RI+ SG + ++D + NRR++ + Sbjct: 285 KKRAAAVAAYIEEQGIESSRITA-SGEGEEKPIASNDTAEGRAQNRRVEATI 335 >gi|323697552|ref|ZP_08109464.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132] gi|323457484|gb|EGB13349.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132] Length = 248 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 71/196 (36%), Gaps = 9/196 (4%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 SE + K+ + A+ R++ ++ K + + Sbjct: 53 SETFSSVTKALQGKMDKISTSRITREEAGVLLDQALMRRQIIESQRKVFAEVKTLQTKKG 112 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIR 269 + V I + + MF P+ ++ + + + H + I I Sbjct: 113 VEGLVSANFEDGVITLRV---PGDVMFQSGQVELTPKGAQLVADLKDFFIKHKDQNIKIV 169 Query: 270 GHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 G+TD +DNW +S RA + + L+K G+ R++ +G A+ + Sbjct: 170 GYTDNVRPGGNSRFKDNWEISAMRAVNVLRELLKLGLESTRLTA-TGLAYLNPLYPNTSE 228 Query: 328 --NSANRRIDILVEDR 341 + NRR++ ++E R Sbjct: 229 EYRAKNRRVEFILEKR 244 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 23/54 (42%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 ++ + W +AD +L+ FF++++ ++ D++ + M Sbjct: 14 EEDDSEGSEWLTTFADLSMLLLVFFILLYSMSTLDNEKFSETFSSVTKALQGKM 67 >gi|313624928|gb|EFR94836.1| chemotaxis protein MotB [Listeria innocua FSL J1-023] Length = 275 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 93/232 (40%), Gaps = 11/232 (4%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 S+ K+++++ N + + + ++ + +K++ Sbjct: 37 ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEAT 96 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 +K+ A+ +K+ + + S + A+++ + + + G+LI+I D Sbjct: 97 EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKITTKYSEEGLLITIRDD--- 153 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291 +F S+ + + ++IGE+ A + + GHTD P NW LS+ R Sbjct: 154 ILFQSGSAELSADKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 213 Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 A + + +++ V+ S G+ R +D NRR++I+V Sbjct: 214 AVNFMEAIIQENSEVNPGEFSA-RGYGEFRPVAKNDIATNREKNRRVEIMVR 264 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 70/209 (33%), Gaps = 1/209 (0%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ + +W I Y+D +T+L+A F+V++ ++ D + + F + Sbjct: 3 KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 ++ ++ P+ + N + +++E K + + + +N + + Sbjct: 63 GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAALLKKQNEEKIEAFKK 122 Query: 139 QSEHCKNSLT-RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q + + K + + + LS +K K L K Sbjct: 123 QIDSYIAAEHLGAKITTKYSEEGLLITIRDDILFQSGSAELSADKREIAKEIGELFAQGK 182 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILI 226 + DN+ ++ + + Sbjct: 183 GTMEGIVSGHTDNVPISTSIYSSNWELSV 211 >gi|332996326|gb|EGK15953.1| inner membrane lipoprotein yiaD [Shigella flexneri VA-6] Length = 219 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSAPLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|261854755|ref|YP_003262038.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] gi|261835224|gb|ACX94991.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] Length = 364 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + + FD ++ PE+ L + ++L + I GHTD + N +LS Sbjct: 257 RLDGIFFDSGKALLKPESNPALDQAVQLLRQQASLKLLIAGHTDDT---GSHAANQKLSQ 313 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 RA + L+ G++ DR++ GF + D + NRR++++ Sbjct: 314 QRAEAVRNALLARGIAADRLTA-QGFGSGVPLADNASDAGRAQNRRVELV 362 >gi|152984892|ref|YP_001347626.1| outer membrane protein [Pseudomonas aeruginosa PA7] gi|150960050|gb|ABR82075.1| probable outer membrane protein [Pseudomonas aeruginosa PA7] Length = 269 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 92/245 (37%), Gaps = 12/245 (4%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 ++ + K + + ++ I + ++E + S+ + S Sbjct: 27 EQSLAKAQSEFDQVKEDSDVLRAAPKDVIRAGESLARAERLSSYWGSSSDVIQYAYLSQR 86 Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DLAKKISSTLSGLVADNIVKGVLFETTR 221 + + L ++ + + +L AK +S G + + E T Sbjct: 87 YSEIARQHAQLNLNQERLVRLQLERERLQLALREAKLLSVQEQGQRLSEEIASLSTEETE 146 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNI 280 G+++++ D +FD + + P K+ + L + VI I G+TD+ Sbjct: 147 RGLVLTLGD----VLFDFNRAELKPAANRTALKLVQFLQLNPRRVIRIEGYTDSV---GD 199 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + N LS RA + VL GV R+ +++G+ + + NRR++I+ Sbjct: 200 RQANLDLSRARAQAVADVLADLGVDPARM-QVAGYGEAFPVTDNASNRGRAQNRRVEIVF 258 Query: 339 EDRQG 343 + +G Sbjct: 259 SNDKG 263 >gi|16762663|ref|NP_458280.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766931|ref|NP_462546.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29144150|ref|NP_807492.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62182147|ref|YP_218564.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161505818|ref|YP_001572930.1| putative outer membrane lipoprotein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|161616710|ref|YP_001590675.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167549121|ref|ZP_02342880.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168232486|ref|ZP_02657544.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168235246|ref|ZP_02660304.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168241813|ref|ZP_02666745.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168465059|ref|ZP_02698951.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818532|ref|ZP_02830532.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446335|ref|YP_002042894.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450414|ref|YP_002047675.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470919|ref|ZP_03076903.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738075|ref|YP_002116578.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250152|ref|YP_002148575.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264832|ref|ZP_03164906.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245549|ref|YP_002217605.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387506|ref|ZP_03214118.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928737|ref|ZP_03219936.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213426937|ref|ZP_03359687.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580286|ref|ZP_03362112.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213622354|ref|ZP_03375137.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646868|ref|ZP_03376921.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852846|ref|ZP_03382378.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224585444|ref|YP_002639243.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910327|ref|ZP_04654164.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289811587|ref|ZP_06542216.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289824292|ref|ZP_06543885.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25512154|pir||AC0982 probable outer membrane protein STY4157 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16422210|gb|AAL22505.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504969|emb|CAD07983.1| putative outer membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139787|gb|AAO71352.1| putative outer membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62129780|gb|AAX67483.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|160867165|gb|ABX23788.1| hypothetical protein SARI_03994 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|161366074|gb|ABX69842.1| hypothetical protein SPAB_04529 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404998|gb|ACF65220.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408718|gb|ACF68937.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457283|gb|EDX46122.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713577|gb|ACF92798.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632363|gb|EDX50847.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197213855|gb|ACH51252.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243087|gb|EDY25707.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197291562|gb|EDY30914.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940065|gb|ACH77398.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604604|gb|EDZ03149.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322170|gb|EDZ07368.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205325701|gb|EDZ13540.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205333235|gb|EDZ19999.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338706|gb|EDZ25470.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344463|gb|EDZ31227.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|224469972|gb|ACN47802.1| putative outer membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|267995894|gb|ACY90779.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312914671|dbj|BAJ38645.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320088065|emb|CBY97827.1| Inner membrane lipoprotein yiaD Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226700|gb|EFX51750.1| putative outer membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613966|gb|EFY10902.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620335|gb|EFY17203.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625340|gb|EFY22167.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629993|gb|EFY26766.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634183|gb|EFY30918.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635916|gb|EFY32625.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643166|gb|EFY39740.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644613|gb|EFY41149.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650855|gb|EFY47247.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652981|gb|EFY49316.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659944|gb|EFY56184.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663277|gb|EFY59481.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668763|gb|EFY64916.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674434|gb|EFY70527.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678358|gb|EFY74419.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680864|gb|EFY76898.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687200|gb|EFY83173.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716635|gb|EFZ08206.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323132006|gb|ADX19436.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192159|gb|EFZ77392.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200663|gb|EFZ85737.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201373|gb|EFZ86439.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206773|gb|EFZ91727.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211797|gb|EFZ96629.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216156|gb|EGA00884.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220379|gb|EGA04833.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226236|gb|EGA10451.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228356|gb|EGA12487.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234177|gb|EGA18265.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237162|gb|EGA21229.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244681|gb|EGA28685.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249162|gb|EGA33080.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250719|gb|EGA34599.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257594|gb|EGA41281.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262303|gb|EGA45864.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266142|gb|EGA49633.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268777|gb|EGA52235.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625391|gb|EGE31736.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629887|gb|EGE36230.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332990496|gb|AEF09479.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 220 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + SG Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|88857596|ref|ZP_01132239.1| probable outer membrane protein [Pseudoalteromonas tunicata D2] gi|88820793|gb|EAR30605.1| probable outer membrane protein [Pseudoalteromonas tunicata D2] Length = 293 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 77/227 (33%), Gaps = 8/227 (3%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 K + ++ +F ++ ++ + D + + + L Sbjct: 70 EQPSKDPELADHLVFIAERKVDIAQAESQRRYLEQQRSEFIAERDNMQLEARIKESELAK 129 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 LS + + + K + + +I + R S+I +F Sbjct: 130 LSATQAKDEAAQAQQNLYYAKQETAGAKQKVKDIQHQLDQLDARNSARGSVI-TLGDVLF 188 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 D + S P I L K+ L + + +I GHTD + N LS RA S Sbjct: 189 DFNKSDIKPAAISHLAKLATFLNTNIDRNITIEGHTDNI---GSKKFNLLLSQRRADSIK 245 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 L+ GV+ RI SG I + NRR+++++ + Sbjct: 246 DYLIGQGVARGRIQT-SGKGISLPVIDNTTADHREQNRRVEVIISEP 291 >gi|330807745|ref|YP_004352207.1| outer membrane protein OmpA [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375853|gb|AEA67203.1| putative lipoprotein; putative outer membrane protein, OmpA [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 263 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 11/220 (5%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + ++ + + D ++ + + + + + A Sbjct: 40 QADPAATKVAALETKDAADFLAKADKAYMDKEDEAKVDQLAYLTNQRVEVAKQTIALRNA 99 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K D + + + + T G L++ D +F + S Sbjct: 100 EAELKNAGDERARALLDARNAQIKQLQDSLNAKQTERGTLVTFGD----VLFATNKSDLR 155 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + + K+ + L + + I G+TD++ N LS RA S L+K GV Sbjct: 156 ASGMTNVSKLAQFLQENPDRKVIIEGYTDST---GSDSYNQSLSERRASSVQLALVKMGV 212 Query: 305 SEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 RI G+ + + NRR+++ + + Sbjct: 213 DPARIVT-QGYGKEFPVADNTSVSGRAMNRRVEVTISNDN 251 >gi|85704529|ref|ZP_01035631.1| hypothetical protein ROS217_05604 [Roseovarius sp. 217] gi|85670937|gb|EAQ25796.1| hypothetical protein ROS217_05604 [Roseovarius sp. 217] Length = 321 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 I+ + F +S+ + +L + +++ + I I GHTD+ A Sbjct: 207 RFDILSRTGNIYFKPASAQLDGASGPLLDAVAQIVTRCPDLTIQIAGHTDSF---GSAAA 263 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 N LS RA S L VS R+ + G+ R + NRRI+ + D Sbjct: 264 NQTLSERRAQSVVDYLATRDVSPSRLIAL-GYGETRPVADNSTEQGRRENRRIEFSISD 321 >gi|332995852|gb|AEF05907.1| outer membrane protein and related peptidoglycan-associated (lipo)protein [Alteromonas sp. SN2] Length = 202 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 10/203 (4%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + + + + S+ A + + Sbjct: 2 AASLAVAGCANDPSNSQKGAAIGAVMGALIGKATGDNDKSRYAWGAAVGAIAGGAIGGYM 61 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L ++ GV + + + F SS P VLQ + +V+ Sbjct: 62 DKQEEALRSELSDTGVQVVREGDNLRLIMPGDIT---FATDSSSISPNFNPVLQDVAKVV 118 Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + + I+GHTD + + N LS RA + VL+ V+ RI+ + G + Sbjct: 119 NNYEKTVLMIKGHTDDT---GSEQYNQGLSERRAGAVRNVLLNYSVNSTRITTV-GMGEY 174 Query: 319 RLKIASDPMNSA--NRRIDILVE 339 + K+ +D + NRR+++ ++ Sbjct: 175 QPKVPNDTAANRSMNRRVELEIQ 197 >gi|218778089|ref|YP_002429407.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759473|gb|ACL01939.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] Length = 377 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++KI +L + + + GHTD + N +LSL+RA + Sbjct: 275 FDFDSYEIKKEYQSCIKKIVAILRANPGLKLIVEGHTDN---KGSKAYNDKLSLNRADAV 331 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 ++ G+ +R+S G+ + ++D + NRR+ + Sbjct: 332 IDSMVGKGIMPERLSA-KGYGFSKPVASNDTEEGRARNRRVQLT 374 >gi|167990874|ref|ZP_02571973.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205330659|gb|EDZ17423.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] Length = 220 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + SG Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|325525952|gb|EGD03644.1| hypothetical protein B1M_15465 [Burkholderia sp. TJI49] Length = 360 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 7/134 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + ++ R MF + ++ KI +A Sbjct: 227 LKDEIAAGTVSVDEDARRSAVTF---RGDAMFLPGGASVQASMNPLIAKIAAEIAKVPGK 283 Query: 266 ISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 ++I G+TD P R+ N LS +RA Q+L +GV +R+ + G + Sbjct: 284 VTIIGYTDNVPIRSRQFSSNQALSEERATQVMQMLQAAGVPANRLEAV-GKGDADPVGDN 342 Query: 325 DPM--NSANRRIDI 336 + NRR++I Sbjct: 343 RTAQGRAQNRRVEI 356 >gi|260591686|ref|ZP_05857144.1| OmpA family protein [Prevotella veroralis F0319] gi|260536329|gb|EEX18946.1| OmpA family protein [Prevotella veroralis F0319] Length = 288 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 77/215 (35%), Gaps = 14/215 (6%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 Q + S + ++ + + + ++ ++ K + L Sbjct: 60 EDQLAQARESAAALQGSLDNSLRNANSNNINISKLVDQINESNQYIRHLVEVKSKSDSLN 119 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 +++ L+ ++ +K V + + + IS+ D ++ S L KI Sbjct: 120 MVLTNNLTRSLSREELKEVDVQVLKGVVYISLADNM---LYKSGSYEINDRAEQTLSKIA 176 Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRAYSAYQVLMKS-GVSEDR 308 +++ ++ I G+TD P R+NW LS RA S Q L V+ R Sbjct: 177 KIITDYSDYDVLIEGNTDNVPINTANDKMKNIRNNWDLSCLRAASVVQYLQDHFNVNPKR 236 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 ++ G + +D NRR I++ + Sbjct: 237 LTAG-GRGEYNPLATNDTELGKQRNRRTQIIITPK 270 >gi|93006911|ref|YP_581348.1| OmpA/MotB [Psychrobacter cryohalolentis K5] gi|92394589|gb|ABE75864.1| OmpA/MotB [Psychrobacter cryohalolentis K5] Length = 217 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 55/148 (37%), Gaps = 9/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV + G + ++ + F + L K+ Sbjct: 73 YMERQARQLEQQMAGTGVTVKPNANGNIDLVM--PGSITFSFDDATLNNSFKPTLDKLAA 130 Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + I+I GHTD+ + N +LS DRAY+ L GV+ +RI+ + + Sbjct: 131 TMNEYNQNTITIAGHTDS---KGTDAYNMKLSRDRAYAVANYLSARGVASNRIN-VVAYG 186 Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342 R ++ NRR+++ V Q Sbjct: 187 ESRPVADNNSEFGRQQNRRVELTVNAPQ 214 >gi|298377743|ref|ZP_06987694.1| flagellar motor protein MotB [Bacteroides sp. 3_1_19] gi|298265446|gb|EFI07108.1| flagellar motor protein MotB [Bacteroides sp. 3_1_19] Length = 280 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 85/219 (38%), Gaps = 20/219 (9%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 ++ + +L RD+ ++ + N E L L ++K+ + ++R + Sbjct: 53 DDNDALNNRIAALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTIN 112 Query: 195 LAKKISSTLSGLVADNIV-----------KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + + + V + + + + +++ D+ +F S+ Sbjct: 113 ELQDMMNAQNAKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKL---LFQSGSAK 169 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 L K+ EVL ++ I GHTD+ P DNW LS+ RA S ++L K Sbjct: 170 VDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTK 229 Query: 302 -SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 GV+ +I G ++ S NRR +I+ Sbjct: 230 DYGVNPLQIQPC-GRGEFMPVADNETADGRSKNRRTEII 267 >gi|161526078|ref|YP_001581090.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189349207|ref|YP_001944835.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616] gi|160343507|gb|ABX16593.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616] gi|189333229|dbj|BAG42299.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616] Length = 316 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 10/170 (5%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + E + + + Q +A +++TL+ I G+ + G+L + Sbjct: 152 QLKINGTQIEMKGEVHNEAQRQQIASDMANTLNPTYT--IKNGLRVSASEQGLLDQTLAN 209 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 R F+ S+ P+ +L ++ LA I GHTD N LS Sbjct: 210 RTIE-FETGSATLTPQGKQILDQMAAALAKLQNRTVDIIGHTDN---SGNRTSNIALSQA 265 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA + L+ G++ +++ +G + +D + NRRI+ V Sbjct: 266 RADAVKGYLITKGIAPQQMTT-TGVGPDQPIAPNDTAEGRARNRRIEFRV 314 >gi|260778449|ref|ZP_05887341.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604613|gb|EEX30908.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450] Length = 222 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 61/208 (29%), Gaps = 9/208 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +Q+ +S L + + I A Sbjct: 18 QATQRQNATTGESETNSVTKGALLGALAGAAVGLATGDDATERRQHALIGAAGGAAVGGG 77 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + L + + GV E L ++ N F S P L+ Sbjct: 78 VGYYFDQQEAALRKELLDSGVQVERVGENQL--MLRMENGIGFQTGSYNLDPSIHNTLRG 135 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + ++L + + GHTD++ N LS RA S L+ GV+ R Sbjct: 136 VAKILVEYPDTSLVIEGHTDST---GSDTTNQVLSERRAESVRSYLISQGVASGRAIA-R 191 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339 G ++ NRR++I + Sbjct: 192 GNGERFPLCTNNTSEGRACNRRVEIKIL 219 >gi|23099999|ref|NP_693465.1| motility protein B [Oceanobacillus iheyensis HTE831] gi|22778230|dbj|BAC14500.1| motility protein B (flagellar motor rotation) [Oceanobacillus iheyensis HTE831] Length = 257 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 69/196 (35%), Gaps = 12/196 (6%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 S + +EN ++ + + LQ L +I+ + Sbjct: 60 AGSGVLDHQEIPVPPPEQEEVDENEDSEEQDEQLSKSESELRDLQALQTQINHFIQEH-- 117 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVIS 267 + + + E T G++I++ N FD S+ + + + +L + Sbjct: 118 -ELTEQLGTELTDEGLMITL---VNEVFFDSGSAEVKETSKEIANDVSNLLYTEPPHQVV 173 Query: 268 IRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASD 325 I GH D P NW LS+ RA + + L + + G+ + + + Sbjct: 174 ISGHADDVPIETEEYNSNWELSVSRAINFMTLILENEELDPT-LFSAKGYGEFQPIVPNT 232 Query: 326 PM--NSANRRIDILVE 339 + NRR+++L+ Sbjct: 233 SAENRAKNRRVEVLIL 248 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 74/229 (32%), Gaps = 5/229 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + SW + YAD +T+L+A F+V++ ++ + + + F Sbjct: 3 RRGKKKSQSHMDESWLLPYADLLTLLVALFIVLFAMSDINIQKYEQLASVFR---SEFSN 59 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 A G+ D Q P + + ++ +E + L + + ++ + Sbjct: 60 AGSGVLDHQEIPVPPPE-QEEVDENEDSEEQDEQLSKSESELRDLQALQTQINHFIQEHE 118 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 +E LT + + + S +E +L + ++ Sbjct: 119 LTEQLGTELTDEGLMITLVNEVFFDSGSAEVKETSKEIANDVSNLLYTEPPHQVVISGHA 178 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF-DKSSSIPLP 246 + ++ + + LI ++ + +F K P Sbjct: 179 DDVPIETEEYNSNWELSVSRAINFMTLILENEELDPTLFSAKGYGEFQP 227 >gi|313677015|ref|YP_004055011.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312943713|gb|ADR22903.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 670 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 8/132 (6%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 + + + FD SS E++ L+ I ++L +S + + I GH Sbjct: 538 QEIDVSILLDEAEVGTKMVLKNIFFDTGSSDLRTESLGELKVIKDLLTNSPDLRVQINGH 597 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM---N 328 TD + N LS RA S L+ +G++ +R+ GF + +++D Sbjct: 598 TDNV---GNSVYNKLLSKKRAQSVVDYLIANGINSERLEA-KGFGEEKPLVSNDDEIGGR 653 Query: 329 SANRRIDILVED 340 NRR +I + Sbjct: 654 EINRRTEIEILG 665 >gi|239813534|ref|YP_002942444.1| type IV / VI secretion system protein, DotU family [Variovorax paradoxus S110] gi|239800111|gb|ACS17178.1| type IV / VI secretion system protein, DotU family [Variovorax paradoxus S110] Length = 442 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 8/140 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V ++ + R F S+ P+ ++ VL++IG+ LA Sbjct: 297 LEPEIKQGLVTVTDEADRSVVRL---RGDSFFGSGSAEPMAASLPVLRRIGQALAEVKGE 353 Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + I GH+D P R+ NW LS RA + L V R+ G A A+ Sbjct: 354 VLITGHSDNQPIRSLRYPSNWHLSAARADAVKGALTTL-VEPARMRS-DGKADAEPVAAN 411 Query: 325 DP--MNSANRRIDILVEDRQ 342 D + NRR+DI++ Sbjct: 412 DTPANRARNRRVDIVLLSEP 431 >gi|228987761|ref|ZP_04147872.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772035|gb|EEM20490.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 234 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 36 GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 95 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 96 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLSIAKEMSNLLVSASPR 149 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + + S + G+ +R Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPGKFSAV-GYGEYRAIA 208 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227 >gi|187477844|ref|YP_785868.1| outer membrane protein A [Bordetella avium 197N] gi|585615|sp|Q05146|OMPA_BORAV RecName: Full=Outer membrane protein A; Flags: Precursor gi|144052|gb|AAA22979.1| outer membrane protein A [Bordetella avium] gi|115422430|emb|CAJ48955.1| outer membrane protein A [Bordetella avium 197N] Length = 194 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L ++ + I G+TD+ N +LS RA S Sbjct: 88 FFDFDKSTLKPEGRQLLDQVAQQARAIDLETIIAVGNTDSI---GTEAYNMKLSERRAAS 144 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 L+ G+ +RI G ++ + NRR++I + + Sbjct: 145 VKAYLVSKGIDPNRIYT-EGKGKLNPIASNKTAEGRARNRRVEIEIVGSR 193 >gi|320173827|gb|EFW49008.1| putative outer membrane lipoprotein [Shigella dysenteriae CDC 74-1112] Length = 195 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 62/171 (36%), Gaps = 10/171 (5%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 E + ++ + + + L GV + I++++ Sbjct: 29 EREAGKSAIGAGLDSLVGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNM-- 86 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289 N FD SS+ P L + VL + +++ G+TD++ N RLS Sbjct: 87 -PNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDST---GGHDLNMRLSQ 142 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 RA S L+ GV RI + G ++ + NRR++I + Sbjct: 143 QRADSVASALITQGVDASRI-RTQGLGPANPIASNSTAEGKAQNRRVEITL 192 >gi|466690|gb|AAB18529.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655] Length = 219 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEANVRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|83643650|ref|YP_432085.1| outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] gi|83631693|gb|ABC27660.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] Length = 464 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 80/257 (31%), Gaps = 13/257 (5%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 + + D D+ + + + + Q + K Sbjct: 211 SAAPAPKDSDRDGVYDDEDACPGTPYGATVDARGCEVIGDADGDGVTDDKDQCPNTKAGA 270 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 D+ + K++ P +K + + + Sbjct: 271 RVDATGCPVVGDDDADGVPNEKDQCPNSPAAAKVDSRGCPLDTDRDGITDGLDACPDTPY 330 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI- 266 + + I++ F +S+ E + ++K+ E + + Sbjct: 331 GAKVDNRGCRIQLSETVTITLN-----VTFPTNSAAITDEFVSEVEKLAEFMRQYPDTKA 385 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 + GHTD N +LS RA + Q++++ G++ +RIS + G+ R ++ Sbjct: 386 VVEGHTDDR---GQDAYNQKLSEKRASAVRQMVVERFGIAGERISSV-GYGETRPIGDNN 441 Query: 326 PMNSA--NRRIDILVED 340 + NRR+ +VE Sbjct: 442 TADGRSANRRVVGVVEA 458 >gi|78049429|ref|YP_365604.1| hypothetical protein XCV3873 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325928969|ref|ZP_08190130.1| flagellar motor protein [Xanthomonas perforans 91-118] gi|78037859|emb|CAJ25604.1| OmpA family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325540658|gb|EGD12239.1| flagellar motor protein [Xanthomonas perforans 91-118] Length = 223 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS +K+++ + + L+ +A R ++ I R + Sbjct: 43 QLSSRLDAEVKQRQAEAQRRQTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S PE VL+ + L E++ + G TD P DNW LS Sbjct: 93 FAFNSDELQPEGREVLKSLATPLTHYLRARDEILMVSGFTDDRPVLGGNRRYADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 RA + + L+ GV + + F + ++ + NRR++I Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADEARRAKNRRVEI 200 >gi|300950898|ref|ZP_07164778.1| OmpA family protein [Escherichia coli MS 116-1] gi|300449827|gb|EFK13447.1| OmpA family protein [Escherichia coli MS 116-1] Length = 217 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|145298369|ref|YP_001141210.1| flagellar motor protein MotB [Aeromonas salmonicida subsp. salmonicida A449] gi|142851141|gb|ABO89462.1| Flagellar motor protein MotB [Aeromonas salmonicida subsp. salmonicida A449] Length = 305 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 61/180 (33%), Gaps = 7/180 (3%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 ++ + E+ S I + K+ LA + + + V Sbjct: 80 EVSAASAVLESARQDSPSIAPISGVPIKQDGTTLATIDTQLQENMGSLVEAGVVKLTLDD 139 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI- 280 + + + + +F S+ VL + +L + +RG+TD N Sbjct: 140 NWLTVEL---SSGLLFGSGSAFMSTNAEPVLNTLSSILKPVDNYVRVRGYTDNQQINNEI 196 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 R NW LS RA + L+ GV+ R+ + +D NR++ + + Sbjct: 197 FRSNWTLSAARAEAVLTALIAKGVAPQRL-AYEAYGEFSPFAGNDSEQGRLQNRKVVVAI 255 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 50/143 (34%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + K+ +L W + YAD+MT++ A F+V++ + + D +A+ Sbjct: 1 MRKRYRLHLQGREHLDRWLVSYADYMTLIFALFVVLYSVALVNKDKYRAVIDGMTQAFNV 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + S G+ + + + ++ E ++S + S KQ I Sbjct: 61 MPPRSDGLLEGLGTSLLNGEVSAASAVLESARQDSPSIAPISGVPIKQDGTTLATIDTQL 120 Query: 136 NSQQSEHCKNSLTRDSEKGKDLC 158 + + + + L Sbjct: 121 QENMGSLVEAGVVKLTLDDNWLT 143 >gi|58866398|gb|AAW82963.1| Omp52 [Leptospira santarosai serovar Shermani] Length = 456 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 12/183 (6%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + ++ K + E + S K + K+ ++ + A + V Sbjct: 279 AEEVRKILGGELPTGIESGSDPKKGSKNFPKQTLSWPEEEENKTKPETAKSSGPPVEIRR 338 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR 278 T GI IS+ N+ +FD +SS E + L+KI VL + I I GHTD Sbjct: 339 TEEGIAISL----NSVLFDHNSSQLKDEAKLELKKIASVLKKYEDREIRISGHTDN---S 391 Query: 279 NIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 N +LS +RA S + L + G+ E R+ G+ + + NRR+D Sbjct: 392 GGDEYNRKLSRERALSVLKELRDEQGLEEKRM-SYEGYGKSKPIADNSTIQGRQKNRRVD 450 Query: 336 ILV 338 I + Sbjct: 451 ITI 453 >gi|328553736|gb|AEB24228.1| flagellar motor protein MotB [Bacillus amyloliquefaciens TA208] Length = 265 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 7/190 (3%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 ++ K++ KE+ + Q+L + + + Sbjct: 72 PPENEKDGIDQLKKDKDKEKEKDKEQKKKEREAADRQELEGVQKQVNQFIKNKKLEHQLE 131 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDAS 275 + T+ G+LI+I D FD ++ E I + ++I +L + I I GHTD Sbjct: 132 TKLTKEGLLITIKDS---IFFDSGQAVIRQEDIPLAKEISNLLVLNPPRNIIISGHTDNV 188 Query: 276 PFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 P +N NW LS+ RA + +L ++ + ++ GF ++ ++ NR Sbjct: 189 PIKNSQFQSNWHLSVMRAVNFMAILTENPKLDAKVFSAKGFGEYKPAASNKTAEGRSKNR 248 Query: 333 RIDILVEDRQ 342 R+++L++ R Sbjct: 249 RVEVLIQPRN 258 >gi|120435967|ref|YP_861653.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] gi|117578117|emb|CAL66586.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] Length = 235 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 60/155 (38%), Gaps = 17/155 (10%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 ++ AK+I + G + + +G+ D+ + FD ++ Sbjct: 78 KMDKQAKQIEEEIPGAEVERVGEGINVT----------FDESSGVYFDTEKYNINAKSQT 127 Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L K+ ++ + + + GHTD + N LS +RA + L+ +G+ R Sbjct: 128 TLNKLADIFKEYPQSNVLVEGHTDDT---GSDSYNLTLSKNRAQAVTGYLVDNGIDRGRF 184 Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + + + K + S NRR+++ + + Sbjct: 185 TT-KWYGESQPKYDNTTADGRSKNRRVELAIVANE 218 >gi|27366879|ref|NP_762406.1| flagellar motor protein [Vibrio vulnificus CMCP6] gi|27358446|gb|AAO07396.1|AE016809_158 Flagellar motor protein [Vibrio vulnificus CMCP6] Length = 442 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 7/141 (4%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + L + + + + + I+ +F+ S+ + V+ K+ Sbjct: 289 ANQIQRSLATEIEMVLLKVDALPDRVRITFQSND---LFESGSAELVAHIFPVVSKVARA 345 Query: 259 LAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + I + GHTD +P + NW LSL RA + L +G R+ G Sbjct: 346 LEATNGKILVVGHTDNNPIFTSKFPSNWHLSLARATALTDRLASAGKLSGRVIP-EGMGD 404 Query: 318 HRLKIASDPMNSA--NRRIDI 336 R ++++ NRR++I Sbjct: 405 ARPLVSNETAEGRSINRRVEI 425 >gi|5081415|gb|AAD39370.1|AF117975_1 outer membrane protein OprF [Pseudomonas stutzeri ZoBell] Length = 321 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E+ ++ + + + + + + GHTD+ + N RLS RA + Sbjct: 222 FDFDKSRVREESYSDIKNLADFMQQYPQTTTTVEGHTDSV---GTDQYNQRLSERRAEAV 278 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 VL+ + GV +R++ + G+ R + NRR++ Sbjct: 279 RNVLVNEHGVQGNRVNSV-GYGESRPVADNSTEEGRQINRRVE 320 >gi|82545917|ref|YP_409864.1| outer membrane lipoprotein [Shigella boydii Sb227] gi|187734257|ref|YP_001882255.1| putative outer membrane lipoprotein [Shigella boydii CDC 3083-94] gi|81247328|gb|ABB68036.1| putative outer membrane protein [Shigella boydii Sb227] gi|187431249|gb|ACD10523.1| OmpA family protein [Shigella boydii CDC 3083-94] gi|320187083|gb|EFW61791.1| Outer membrane protein A precursor [Shigella flexneri CDC 796-83] gi|332089323|gb|EGI94427.1| inner membrane lipoprotein yiaD [Shigella boydii 3594-74] Length = 219 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|239993109|ref|ZP_04713633.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Alteromonas macleodii ATCC 27126] Length = 213 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 60/146 (41%), Gaps = 10/146 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L + GV + + + F SS P VLQ + Sbjct: 68 NYMDKQEEELRNELSDTGVQVVREGDNLRLIMPGDIT---FATDSSSISPNFNPVLQDVA 124 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +V+ + + + I+GHTD + + N LS RA + +L+ V+ RI+ + G Sbjct: 125 KVVNNYEKTVLMIKGHTDDT---GSEQYNQSLSERRAGAVKNLLINYSVNPTRITTV-GM 180 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 + K+ ++ + NRR+++ ++ Sbjct: 181 GEYAPKVPNNSAANRSMNRRVEMEIQ 206 >gi|170697801|ref|ZP_02888887.1| type VI secretion system OmpA/MotB family protein [Burkholderia ambifaria IOP40-10] gi|170137303|gb|EDT05545.1| type VI secretion system OmpA/MotB family protein [Burkholderia ambifaria IOP40-10] Length = 433 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 10/167 (5%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + K+ + + L G + V + ++ R Sbjct: 270 SRSADVQKQIADIARMTPPPAPPQLHLKQLLQG---EIAAGTVSVDEDARHSAVTF---R 323 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDR 291 MF + ++ KI +A ++I G+TD P R+ N LS +R Sbjct: 324 GDAMFKPGGASVQASMNPLVSKIAAEIAKVPGKVTIIGYTDNVPIRSRHFASNQVLSEER 383 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 A Q+L +GV +R+ + G + + NRR++I Sbjct: 384 ATLVMQMLQAAGVPANRLEAV-GKGDADPVGDNRTAQGRAQNRRVEI 429 >gi|83854840|ref|ZP_00948370.1| flagellar motor protein [Sulfitobacter sp. NAS-14.1] gi|83842683|gb|EAP81850.1| flagellar motor protein [Sulfitobacter sp. NAS-14.1] Length = 582 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 83/250 (33%), Gaps = 16/250 (6%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 ++ + + +T ++ L N Q E + + L Sbjct: 336 DAARSKLAQEEAATAAAQRQTELLNQQVAALRGQLGELQSLLDDAVARDAAKEVQLQSLG 395 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 +N + L + RL+ K + S + +L I Sbjct: 396 SDLNTALARVAAEERRRAELEAAERARLEAETKNLEQYRSEFFGRL--RALLGNQEGVRI 453 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASP 276 + +F ++ + + K+ +L VI + GHTD P Sbjct: 454 EGDRFVFSSEVLFPPGAATLSADGRGEIAKVAGILRNIAADIPPEIDWVIRVDGHTDNQP 513 Query: 277 FRN--IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSAN 331 DNW LS RA S + ++ G++ +R+ +GF ++ + + + N Sbjct: 514 LSGLGEFADNWELSQARALSVVKYMINFLGIAPERL-AANGFGQYQPVASGNTEAARAQN 572 Query: 332 RRIDILVEDR 341 RRI++ + +R Sbjct: 573 RRIELKLTER 582 >gi|329117988|ref|ZP_08246701.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200] gi|327465876|gb|EGF12148.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200] Length = 226 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 10/173 (5%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + A+ + + L + GV + + I + + + Sbjct: 50 ALSHGSKGARNSALACGAVGAGVGGYMDYQEKKLRENLANTGVDVQRSGDQIKLVMPENV 109 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 F S+ L + L + SI GHTD + N LS R Sbjct: 110 T---FATGSATLSTNAQNALAAAAQTLTQYPDTTLSINGHTDNT---GSDAINAPLSQRR 163 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 A + L GV+ R+ G + ++ + NRR++IL+ Q Sbjct: 164 AQAVASFLQSRGVNGSRL-ATYGHGSRQPVASNATAEGRAQNRRVEILINPDQ 215 >gi|322418609|ref|YP_004197832.1| OmpA/MotB domain-containing protein [Geobacter sp. M18] gi|320124996|gb|ADW12556.1| OmpA/MotB domain protein [Geobacter sp. M18] Length = 426 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD P L+ +G+ L + I GHTD++ N RLS RA + Sbjct: 314 FDTDKWNIKPRYHAELKTVGDFLNQFPDAYGEISGHTDSTH---TDDYNQRLSERRAKAV 370 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 ++K+ + R+ G+ R + + NRRI+ Sbjct: 371 RDYIVKNFKIDPKRL-TGKGYGEKRPMATNKTAVGRAKNRRIE 412 >gi|110807356|ref|YP_690876.1| putative outer membrane lipoprotein [Shigella flexneri 5 str. 8401] gi|229088112|ref|NP_709330.3| putative outer membrane lipoprotein [Shigella flexneri 2a str. 301] gi|229089132|ref|NP_839340.2| putative outer membrane lipoprotein [Shigella flexneri 2a str. 2457T] gi|110616904|gb|ABF05571.1| putative outer membrane protein [Shigella flexneri 5 str. 8401] gi|281602912|gb|ADA75896.1| putative outer membrane protein [Shigella flexneri 2002017] gi|313647591|gb|EFS12041.1| inner membrane lipoprotein yiaD [Shigella flexneri 2a str. 2457T] gi|332750012|gb|EGJ80424.1| inner membrane lipoprotein yiaD [Shigella flexneri K-671] gi|332750169|gb|EGJ80580.1| inner membrane lipoprotein yiaD [Shigella flexneri 4343-70] gi|332751243|gb|EGJ81646.1| inner membrane lipoprotein yiaD [Shigella flexneri 2747-71] gi|332997456|gb|EGK17072.1| inner membrane lipoprotein yiaD [Shigella flexneri K-218] gi|333012432|gb|EGK31813.1| inner membrane lipoprotein yiaD [Shigella flexneri K-304] Length = 216 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 77 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSAPLKPAGANTLTGVAM 133 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 134 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 189 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 190 PANPIASNSTAEGKAQNRRVEITL 213 >gi|262280028|ref|ZP_06057813.1| OmpA/MotB domain-containing protein [Acinetobacter calcoaceticus RUH2202] gi|262260379|gb|EEY79112.1| OmpA/MotB domain-containing protein [Acinetobacter calcoaceticus RUH2202] Length = 217 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 9/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV G + I+ + FD + S P L K+ + Sbjct: 76 YLDQKEKKLRQQMAGTGVDVGRNPDGSVQLIM--PGSITFDTNKSNIKPNFYSTLDKVAQ 133 Query: 258 VLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 LA + I + G+TD + N LS RA S L G+S RI G+ Sbjct: 134 TLAEDNKSAILVTGYTDNT---GNDSINIPLSQSRAQSVKNYLAGKGLSSSRIDA-QGYG 189 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 + + NRR++I + +Q Sbjct: 190 SSNPIADNSTASGREQNRRVEISIYAKQ 217 >gi|5081413|gb|AAD39368.1|AF117973_1 outer membrane protein OprF [Pseudomonas stutzeri DSM 4166] Length = 323 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E+ ++ + + + + ++ GHTD+ + N RLS RA + Sbjct: 224 FDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSV---GTDQYNQRLSERRAEAV 280 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 VL+ + GV +R++ + G+ R + NRR++ Sbjct: 281 RNVLVNEYGVQGNRVNSV-GYGESRPVADNSTEEGRQINRRVE 322 >gi|317502696|ref|ZP_07960808.1| immunogenic lipoprotein PG3 [Prevotella salivae DSM 15606] gi|315666182|gb|EFV05737.1| immunogenic lipoprotein PG3 [Prevotella salivae DSM 15606] Length = 225 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 52/141 (36%), Gaps = 9/141 (6%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + + + V+ V + ++ + +F + + + L K +VL Sbjct: 74 AAQAAQIRNAKVEEVTDANGLKAVKVTF---DSGILFATNQATLTASSKNDLVKFSKVLK 130 Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 +++ + I GHTD + N LS RA S L GVS + + G Sbjct: 131 DNSDCHVDIYGHTDNT---GNDAINIPLSNRRAESVVNYLKSCGVSSSQFQNVVGKGSSE 187 Query: 320 LKIASDPMNSA--NRRIDILV 338 + NRR+++ + Sbjct: 188 PVADNSTAAGRKQNRRVEVYL 208 >gi|302339235|ref|YP_003804441.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293] gi|301636420|gb|ADK81847.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293] Length = 340 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 8/249 (3%) Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 I ++ + + + LK + +K S + + E Sbjct: 98 DDGTLIRIAENSQASIADISLKETDISLEKGRIISRFQKITGSGNHRVETPNAVCGIRGT 157 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + P E + + +++ + + S + + + Sbjct: 158 ELIFDAGQEGTTIYGMSGLTEVASPDHPENPVLLGFQQKTRVNQGALPSPPEEMSDEEVA 217 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 + + ++ ++ +T F S+ PE+ L +I +L + I GHT Sbjct: 218 YFRMLLDSLHNEVVVLV--TSTLSFKPDSAELTPESGEELSRIASILKKKRIEVEIAGHT 275 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330 + LSL RA S + L+ GV E R+ + G+ R ++D + Sbjct: 276 ADV---GDRASQYTLSLQRAESVKRTLVSLGVKERRL-SVKGYGGSRPIASNDSQEGRAQ 331 Query: 331 NRRIDILVE 339 NRR++ LV Sbjct: 332 NRRVEFLVR 340 >gi|168260613|ref|ZP_02682586.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350258|gb|EDZ36889.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 220 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGADTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + SG Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|197124706|ref|YP_002136657.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] gi|196174555|gb|ACG75528.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] Length = 206 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 7/118 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286 +++ + +FD SS PE I L+++G+VLA + I I G+TDA+ N Sbjct: 91 LVEMKGDILFDSGSSALKPEAISKLEQMGDVLAKYGDDRIRIEGYTDAT---GSKSMNEE 147 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 LSL RA + +VL+ GV E +I+ + G R + + NRR+++ ++ Sbjct: 148 LSLRRADAVKRVLVGRGVQEKQITAL-GMGPVRPVADNGTASGRAQNRRVELHIDVPN 204 >gi|257451630|ref|ZP_05616929.1| Outer membrane porin F [Fusobacterium sp. 3_1_5R] gi|257466946|ref|ZP_05631257.1| Outer membrane porin F [Fusobacterium gonidiaformans ATCC 25563] Length = 183 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 57/155 (36%), Gaps = 15/155 (9%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + K + + GV +++S+ +FD + Sbjct: 41 EDIDAAKKPLEDIIV-----FNQDGVTIRREGNNLILSM---PELILFDFNKYEVKNGIK 92 Query: 250 VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L+ + L + ++ I G+TD F N LS++RA + L+ G E+ Sbjct: 93 PSLRTLANALGANADIKIKIDGYTD---FIGSEGYNLELSVNRAKAIKSYLVAQGAIENN 149 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 I I G+ ++D + NRR++ ++ Sbjct: 150 I-SIEGYGKQNPVASNDTESGRARNRRVEFIISRS 183 >gi|156936282|ref|YP_001440198.1| putative outer membrane lipoprotein [Cronobacter sakazakii ATCC BAA-894] gi|156534536|gb|ABU79362.1| hypothetical protein ESA_04181 [Cronobacter sakazakii ATCC BAA-894] Length = 220 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD S + P L + Sbjct: 80 YMDVQEAKLRQKMQGTGVSVTRSGDNIILNM---PNNVTFDSSQANLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N +LS RA S L+ GV+ +RI + SG Sbjct: 137 VLKEYPKTAVNVVGYTDST---GGQALNMKLSQQRAESVASALITQGVAANRI-RTSGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPVASNSTEEGKAQNRRVEITL 216 >gi|332143465|ref|YP_004429203.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327553487|gb|AEB00206.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 213 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 60/146 (41%), Gaps = 10/146 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L + GV + + + F S+ P VLQ + Sbjct: 68 NYMDKQEEELRTELSDTGVQVVREGDNLRLIMPGDIT---FATDSASISPNFNPVLQDVA 124 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +V+ + + + I+GHTD + + N LS RA + +L+ V+ RI+ + G Sbjct: 125 KVVNNYEKTVLMIKGHTDDT---GSEQYNQSLSERRAGAVKNLLINYSVNPTRITTV-GM 180 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 + K+ ++ + NRR+++ ++ Sbjct: 181 GEYSPKVPNNSAANRSMNRRVEMEIQ 206 >gi|78778212|ref|YP_394527.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251] gi|78498752|gb|ABB45292.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251] Length = 348 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +S ++ +++ E L I GHTD+ +DN +LS +RA S Sbjct: 245 FDTASYKVDNASMPKVKEFAEFLKDMPNYNAKIVGHTDSV---GSDKDNQKLSENRANSV 301 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 +++K G+ RI+ G +D + NRRI+ Sbjct: 302 KTLIVKEGIDTKRITT-EGKGEKSPIATNDTKEGKAQNRRIE 342 >gi|5081411|gb|AAD39366.1|AF117971_1 outer membrane protein OprF [Pseudomonas stutzeri LMG 11199T] Length = 328 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E+ ++ + + + + ++ GHTD+ + N RLS RA + Sbjct: 224 FDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSV---GTDQYNQRLSERRAEAV 280 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 VL+ + GV +R++ + G+ R + NRR++ Sbjct: 281 RNVLVNEYGVQGNRVNSV-GYGESRPVADNSTEEGRQINRRVE 322 >gi|5081412|gb|AAD39367.1|AF117972_1 outer membrane protein OprF [Pseudomonas stutzeri A15] Length = 321 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E+ ++ + + + + ++ GHTD+ + N RLS RA + Sbjct: 222 FDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSV---GTDQYNQRLSERRAEAV 278 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 VL+ + GV +R++ + G+ R + NRR++ Sbjct: 279 RNVLVNEYGVQGNRVNSV-GYGESRPVADNSTEEGRQINRRVE 320 >gi|229019729|ref|ZP_04176535.1| OmpA/MotB domain protein [Bacillus cereus AH1273] gi|229025955|ref|ZP_04182345.1| OmpA/MotB domain protein [Bacillus cereus AH1272] gi|228735356|gb|EEL85961.1| OmpA/MotB domain protein [Bacillus cereus AH1272] gi|228741574|gb|EEL91768.1| OmpA/MotB domain protein [Bacillus cereus AH1273] Length = 234 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 89/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 36 GGTGNKEFLSDQKPNDEKELSASSLEVEQARKQEEARAEEKKEMAELKALQKKIDQYINE 95 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 96 ---NQLSSAFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKELSNLLVSASPR 149 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSTI-GYGEYRSIA 208 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227 >gi|332828413|gb|EGK01122.1| hypothetical protein HMPREF9455_02644 [Dysgonomonas gadei ATCC BAA-286] Length = 224 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 10/142 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + V I ++ + +F +SS + L L ++ Sbjct: 80 KKELEQINGAQVESINDGQAIKVTF---ESGILFATNSSTLNSASQSALTSFATSLNNNP 136 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I GHTD + N LS RA S Y L GVS R+ GF + Sbjct: 137 DTDVQIYGHTDNT---GSDAINNPLSEKRAQSVYNFLQTKGVSGSRMVS-QGFGSTQPVA 192 Query: 323 ASDP--MNSANRRIDILVEDRQ 342 + S NRR++I + + Sbjct: 193 DNSTVAGRSQNRRVEIYILPNE 214 >gi|146306454|ref|YP_001186919.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp] gi|145574655|gb|ABP84187.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 210 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E+ ++ + + + + ++ GHTD+ N LS RA + Sbjct: 105 FDFDKSQVKQESYGDIKALADFMKQYPQTSTVVEGHTDSV---GSDAYNQGLSERRANAV 161 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 +VL+ GV +R+ + G+ R + NRR++ VE Sbjct: 162 REVLVNQYGVESNRVQAV-GYGESRPVADNATAEGRAINRRVEAEVEA 208 >gi|315918088|ref|ZP_07914328.1| outer membrane porin F [Fusobacterium gonidiaformans ATCC 25563] gi|317058194|ref|ZP_07922679.1| outer membrane porin F [Fusobacterium sp. 3_1_5R] gi|313683870|gb|EFS20705.1| outer membrane porin F [Fusobacterium sp. 3_1_5R] gi|313691963|gb|EFS28798.1| outer membrane porin F [Fusobacterium gonidiaformans ATCC 25563] Length = 189 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 57/155 (36%), Gaps = 15/155 (9%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + K + + GV +++S+ +FD + Sbjct: 47 EDIDAAKKPLEDIIV-----FNQDGVTIRREGNNLILSM---PELILFDFNKYEVKNGIK 98 Query: 250 VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L+ + L + ++ I G+TD F N LS++RA + L+ G E+ Sbjct: 99 PSLRTLANALGANADIKIKIDGYTD---FIGSEGYNLELSVNRAKAIKSYLVAQGAIENN 155 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 I I G+ ++D + NRR++ ++ Sbjct: 156 I-SIEGYGKQNPVASNDTESGRARNRRVEFIISRS 189 >gi|149277257|ref|ZP_01883399.1| lipoprotein PG3 [Pedobacter sp. BAL39] gi|149232134|gb|EDM37511.1| lipoprotein PG3 [Pedobacter sp. BAL39] Length = 226 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 10/138 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 N + GI++ + +F + + ++ + L Sbjct: 81 QAAEIQNAIPNAEVIREGEGIIVKF---DSGILFGFDKADLTAQAKTNVKSLAGSLNQYP 137 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I + GHTD + N LS RA + + GV R+ + G Sbjct: 138 GTDIKVIGHTDN---KGTETYNMGLSERRAAAVKAYAVSQGVPSSRLITV-GKGFSEPID 193 Query: 323 ASDPM--NSANRRIDILV 338 + +ANRR+++++ Sbjct: 194 DNSTEAGRAANRRVEVVI 211 >gi|291615624|ref|YP_003518366.1| YiaD [Pantoea ananatis LMG 20103] gi|291150654|gb|ADD75238.1| YiaD [Pantoea ananatis LMG 20103] Length = 237 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SSS P L + Sbjct: 97 YMDVQEAKLRDKMKGTGVSVTRQGDNIVLNM---PNNVTFDSSSSSLKPAGANTLTGVAM 153 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ GHTD++ N RLS RA S L+ GV+ +R+ G Sbjct: 154 VLKEYPKTAVNVVGHTDST---GSRALNMRLSQQRAESVASALIVQGVAGNRLHT-QGAG 209 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 + + NRR++I + Sbjct: 210 PDSPVATNSTEAGKAQNRRVEITL 233 >gi|206560984|ref|YP_002231749.1| putative OmpA family membrane protein [Burkholderia cenocepacia J2315] gi|198037026|emb|CAR52947.1| putative OmpA family membrane protein [Burkholderia cenocepacia J2315] Length = 215 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F + P +L + L + +V SI G+TD++ A+ N LS + Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQVTASIVGYTDST---GSAQLNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L++ GV+ R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNALVQRGVNGGRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212 >gi|114776497|ref|ZP_01451542.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Mariprofundus ferrooxydans PV-1] gi|114553327|gb|EAU55725.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Mariprofundus ferrooxydans PV-1] Length = 499 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 93/242 (38%), Gaps = 17/242 (7%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 I +S + + T K + L+ +++ + + + + + + Sbjct: 271 DIDTDSNNPMLSRTQPAKIIAAVREMKQTLATERKARKAERVQLKQQYETELKARLAEET 330 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 ++K + + + + ++R+ Q +++ + + + + Sbjct: 331 SQLSKAQQSQMSNIKEAFQAKLERETYEQKRQQRLRALFKPNQVELLAN----------L 380 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARD 283 SI+ + + F SS + +L ++ E A + I GHTD + + Sbjct: 381 DGSILMRLSALKFASGSSKINAKYYDMLGQVKEAFAIYADRKIRIEGHTDN---KGDVKV 437 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 N RLSL RA + L+ +G R+ + G+ R ++ D + NRRID+++E Sbjct: 438 NQRLSLKRAEAVRDFLIAAGADGSRLKAL-GYGEVRPIASNEFDRGRAMNRRIDVVIEAP 496 Query: 342 QG 343 G Sbjct: 497 AG 498 >gi|126666899|ref|ZP_01737875.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter sp. ELB17] gi|126628615|gb|EAZ99236.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter sp. ELB17] Length = 232 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV I + + FD + + + L+ + Sbjct: 92 YMDRQEVQLRQQLEGTGVRVVRNGDEISLVM---PGNITFDLNQTSIRSQFAGTLESVAL 148 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +I I GHTD+ N LS RA S L+ G+ E R ++ G+ Sbjct: 149 VLKEFDQTIIQIEGHTDSQ---GGDSYNQLLSERRASSVRDFLLNQGI-ESRRTRAVGYG 204 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 ++D NRR+++ + Sbjct: 205 ERYPVASNDTSGGREQNRRVELTL 228 >gi|187922936|ref|YP_001894578.1| hypothetical protein Bphyt_0935 [Burkholderia phytofirmans PsJN] gi|187714130|gb|ACD15354.1| type IV / VI secretion system protein, DotU family [Burkholderia phytofirmans PsJN] Length = 414 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 50/137 (36%), Gaps = 7/137 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + ++ R MF ++ KI + Sbjct: 281 LKNEIAAGTVSVDEDARHSSVTF---RGDAMFPPGGVNVNASMGPLIAKIASEIGKVPGK 337 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD P R+ N LS +RA Q+L SGV+ R+ I G + Sbjct: 338 VTVTGHTDNLPIRSRQFASNDALSEERATQVMQMLQASGVAAARLEAIGG-GEANPIGDN 396 Query: 325 DPM--NSANRRIDILVE 339 + NRR++I V Sbjct: 397 ATAQGRAQNRRVEITVT 413 >gi|170698903|ref|ZP_02889963.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|170136156|gb|EDT04424.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] Length = 247 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 79/248 (31%), Gaps = 18/248 (7%) Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR--------DSEK 153 I + G + L + + N + + Sbjct: 5 TAGTIAPPPANATPGQVVAGGKVSDEATKAAVLQKLRDTYGAANVVDQIEVGDVATPPNW 64 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 ++ K + + + E + + + Q LA +++TL+ I Sbjct: 65 SANVQKLLGAQLKQISKGQLKINGTQIEVKGEVHNEAQRQQLASDMANTLNPTYT--IKN 122 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272 G+ + G+L + R F+ S+ P+ +L ++ L+ I GHT Sbjct: 123 GLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRQILDQMAAALSKLQNRTVDIIGHT 181 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330 D N LS RA + L+ + +++ +G + +D + Sbjct: 182 DN---SGNRTSNIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQPIAPNDTAEGRAR 237 Query: 331 NRRIDILV 338 NRRI+ V Sbjct: 238 NRRIEFRV 245 >gi|116695082|ref|YP_840658.1| OmpA/MotB-family outer membrane protein [Ralstonia eutropha H16] gi|113529581|emb|CAJ95928.1| outer membrane protein, OmpA/MotB-family [Ralstonia eutropha H16] Length = 435 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290 R MF + + L K+ + + + GH+D P ++ N LS + Sbjct: 325 RGDDMFGAGRAEVNAKLTPTLNKVAGEINKLQGKVQVIGHSDNQPIKSARYPSNQVLSEE 384 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 RA + L GV++ R+ I G + + NRR++++V Sbjct: 385 RAAMVSEYLASQGVAKRRLEAI-GKGDTEPLTDNKTPAARAANRRVEVVVTQ 435 >gi|317494692|ref|ZP_07953104.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917294|gb|EFV38641.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 219 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + S L GV I++++ N FD SSS P L + Sbjct: 80 YMDVQESKLRDKMRGTGVSVTRQGDNIILNM---PNNVTFDSSSSTLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV R+ + G Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSQDLNMRLSQQRADSVASALIVQGVEASRV-RTQGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|238764428|ref|ZP_04625377.1| hypothetical protein ykris0001_27500 [Yersinia kristensenii ATCC 33638] gi|238697344|gb|EEP90112.1| hypothetical protein ykris0001_27500 [Yersinia kristensenii ATCC 33638] Length = 538 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 15/186 (8%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + + L L ++ +L + +++ + L + + + + + Sbjct: 342 PMTHYEPKAQALAALQQDALLLERWQRQGEPLKYSLGLYPGQRLWLALQQAIDTYIPPPP 401 Query: 224 ILISIIDQ-------RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDAS 275 + Q +FD P + +L + I + GHTD Sbjct: 402 PPTPVEKQTPKTVRLDALSLFDTGKYQLKPGSTKMLVSALIDIRAKPGWLIVVAGHTD-- 459 Query: 276 PFRNIARDNWRLSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332 A N LSL RA + L S VS + G+ R ++ + NR Sbjct: 460 -ITGDAGANQTLSLKRAEALRDWMLSTSDVSPT-CFAVQGYGATRPIATNESTEGRALNR 517 Query: 333 RIDILV 338 R++I + Sbjct: 518 RVEISL 523 >gi|330502392|ref|YP_004379261.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] gi|328916678|gb|AEB57509.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] Length = 210 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + E+ ++ + + + + ++ GHTD+ N LS RA + Sbjct: 105 FDFDKAQVKQESYGDIKALADFMKQYPQTSTVVEGHTDSV---GSDAYNQGLSERRASAV 161 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 VL+ GV R+ + G+ R + + NRR++ VE Sbjct: 162 RDVLVNQYGVESGRVQAV-GYGESRPVADNATADGRAINRRVEAEVEA 208 >gi|299535178|ref|ZP_07048502.1| chemotaxis protein motB [Lysinibacillus fusiformis ZC1] gi|298729299|gb|EFI69850.1| chemotaxis protein motB [Lysinibacillus fusiformis ZC1] Length = 250 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 12/182 (6%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + + N ++ +K ++ L ++ + + ++ + + E T Sbjct: 66 EQPAPVPTPNADSDQTPQQNSAYLKDQQELAEIKDSVDNFIA---VNEMEDQFATEMTDE 122 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIA 281 G+L++I D +FD + PE + + +++ +L + I I GHTD P Sbjct: 123 GLLVTIRDS---ILFDPGQATVKPEYVPIAKELSTMLESDPARNIVITGHTDNVPAGPNF 179 Query: 282 RDNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 N++LS+ RA ++L++S + R S G +R +D + NRR+++L Sbjct: 180 TSNFQLSVMRATKFLELLIESNDKLDPTRFSA-KGNGEYRAIAPNDTAEGRAKNRRVEVL 238 Query: 338 VE 339 ++ Sbjct: 239 IQ 240 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 51/157 (32%), Gaps = 5/157 (3%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 + SW + YAD +T+L+A F++++ ++ D + + + FN F Sbjct: 10 HDEHIDESWLVPYADILTLLLAVFIILFASSSVDQEKLERMSAVFNQVFD-----GGTSF 64 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 EQ P + D + ++ ++ N + ++ ++ Sbjct: 65 LEQPAPVPTPNADSDQTPQQNSAYLKDQQELAEIKDSVDNFIAVNEMEDQFATEMTDEGL 124 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 RDS + E +E + Sbjct: 125 LVTIRDSILFDPGQATVKPEYVPIAKELSTMLESDPA 161 >gi|303248273|ref|ZP_07334535.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ] gi|302490298|gb|EFL50210.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ] Length = 246 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 9/172 (5%) Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 P +S A R++ + + + S + + V I I Sbjct: 75 ATPDMSTLVEQARIRQRIIGEQRRVYDQFRSYVSTKGLDGVVAATLEAGKITIGF---PA 131 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASP--FRNIARDNWRLSLD 290 +F K E L+ + + L + E I+IRG TD P + RDNW +S Sbjct: 132 GVLFPKDGVDLTEEGKQRLRTVYDFLIKTAGERINIRGFTDNQPPGAGSRFRDNWEVSSL 191 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 RA + + ++ G+ +R++ +G A +D + N+R++ ++E Sbjct: 192 RAVAVLRYMVSLGMPPNRLTA-TGLADLEPLYPNDTPAHRARNQRVEFVLER 242 Score = 52.7 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 28/85 (32%), Gaps = 3/85 (3%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 D+ W +D +LM FF++++ +++ D F+ L SK Sbjct: 11 DDDEEVEASSQWLTTLSDLSMLLMTFFIMLFSMSSLDVKKF---TDSFSSVRNALGNKSK 67 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHI 106 I S I + I Sbjct: 68 AITTGPIATPDMSTLVEQARIRQRI 92 >gi|296390816|ref|ZP_06880291.1| hypothetical protein PaerPAb_21793 [Pseudomonas aeruginosa PAb1] Length = 237 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV + I + + F S+ P L + Sbjct: 87 DKQEAELRRQMEGTGVEVQRQGDDIKLIM---PGNITFATDSANIAPSFYAPLNNLANSF 143 Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I I G+TD++ + N LS RA S L GV R+S G Sbjct: 144 KQYNQNTIEIVGYTDST---GSRQHNMDLSQRRAQSVAGYLTAQGVDGTRLST-RGMGPD 199 Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343 + ++ + NRR+++ + G Sbjct: 200 QPIASNSTADGRAQNRRVEVNLRPVPG 226 >gi|255016489|ref|ZP_05288615.1| putative flagellar motor protein MotB [Bacteroides sp. 2_1_7] Length = 280 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 85/219 (38%), Gaps = 20/219 (9%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 ++ + +L RD+ ++ + N E L L ++K+ + ++R + Sbjct: 53 DDNDALNNRIAALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTIN 112 Query: 195 LAKKISSTLSGLVADNIV-----------KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + + + V + + + + +++ D+ +F S+ Sbjct: 113 ELQDMMNAQNEKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKL---LFQSGSAR 169 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMK 301 L K+ EVL ++ I GHTD+ P DNW LS+ RA S ++L K Sbjct: 170 VDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTK 229 Query: 302 -SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 GV+ +I G ++ S NRR +I+ Sbjct: 230 DYGVNPLQIQPC-GRGEFMPVADNETADGRSKNRRTEII 267 >gi|171060724|ref|YP_001793073.1| hypothetical protein Lcho_4056 [Leptothrix cholodnii SP-6] gi|170778169|gb|ACB36308.1| type IV / VI secretion system protein, DotU family [Leptothrix cholodnii SP-6] Length = 460 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 69/153 (45%), Gaps = 10/153 (6%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILI------SIIDQRNTPMFDKSSSIPLPET 248 L +++ + + E +++ S++ R +F+ S+ Sbjct: 282 LNPPVAAVAQPAPQPRLATFLRPEIAEGAVVVRDEVDRSVVTLRGDGLFEPGSATLAAPK 341 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSED 307 +L+++ + LA + + GHTD+ P R+ NW LS +RA + ++L+ V+ + Sbjct: 342 EALLRRVADALAQFGGAVLVTGHTDSQPIRSARFPSNWHLSQERAGAVRELLVSQQVATE 401 Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILV 338 R+ + G A +A+D + NRR++I + Sbjct: 402 RV-RAEGRADGEPVVANDSAGNRALNRRVEITL 433 >gi|149202409|ref|ZP_01879382.1| hypothetical protein RTM1035_13818 [Roseovarius sp. TM1035] gi|149144507|gb|EDM32538.1| hypothetical protein RTM1035_13818 [Roseovarius sp. TM1035] Length = 586 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 79/243 (32%), Gaps = 16/243 (6%) Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 K+ + + + + + + E ++ +S+ E N Sbjct: 345 KLSEEAAQATEAQKQQALLNQQVAALRQQLSGLQALLDESKAREAETEVQLQSLGNELNT 404 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQ 231 L ++ E+ ++ L + L ++ + + G+ I Sbjct: 405 ALARVAAEERRRRIAEEERARLLEAEKEDLEKYRSEFFGRLRDVLGQQQGVQIVGDRFVF 464 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPF--RNIA 281 + +F + + K+ +L + V+ + GHTD P Sbjct: 465 SSEVLFAPGEADLSAAGQSEIAKVAGILRNVIGDIPEGIDWVLQVDGHTDNVPIIEGARF 524 Query: 282 RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 DNW LS RA S + L G R+S +G+ + D + NRRI++ + Sbjct: 525 ADNWALSQARALSVVRYLTGALGFPAGRLSA-NGYGEFQPVNPEDTPAARAQNRRIELKL 583 Query: 339 EDR 341 R Sbjct: 584 TTR 586 >gi|15596030|ref|NP_249524.1| hypothetical protein PA0833 [Pseudomonas aeruginosa PAO1] gi|107100290|ref|ZP_01364208.1| hypothetical protein PaerPA_01001315 [Pseudomonas aeruginosa PACS2] gi|116048755|ref|YP_792445.1| hypothetical protein PA14_53500 [Pseudomonas aeruginosa UCBPP-PA14] gi|254239185|ref|ZP_04932508.1| hypothetical protein PACG_05376 [Pseudomonas aeruginosa C3719] gi|254245120|ref|ZP_04938442.1| hypothetical protein PA2G_06007 [Pseudomonas aeruginosa 2192] gi|313105709|ref|ZP_07791972.1| hypothetical protein PA39016_000110006 [Pseudomonas aeruginosa 39016] gi|9946728|gb|AAG04222.1|AE004518_3 hypothetical protein PA0833 [Pseudomonas aeruginosa PAO1] gi|115583976|gb|ABJ09991.1| hypothetical protein PA14_53500 [Pseudomonas aeruginosa UCBPP-PA14] gi|126171116|gb|EAZ56627.1| hypothetical protein PACG_05376 [Pseudomonas aeruginosa C3719] gi|126198498|gb|EAZ62561.1| hypothetical protein PA2G_06007 [Pseudomonas aeruginosa 2192] gi|310878474|gb|EFQ37068.1| hypothetical protein PA39016_000110006 [Pseudomonas aeruginosa 39016] Length = 237 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV + I + + F S+ P L + Sbjct: 87 DKQEAELRRQMEGTGVEVQRQGDDIKLIM---PGNITFATDSANIAPSFYAPLNNLANSF 143 Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I I G+TD++ + N LS RA S L GV R+S G Sbjct: 144 KQYNQNTIEIVGYTDST---GSRQHNMDLSQRRAQSVAGYLTAQGVDGTRLST-RGMGPD 199 Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343 + ++ + NRR+++ + G Sbjct: 200 QPIASNSTADGRAQNRRVEVNLRPVPG 226 >gi|257457608|ref|ZP_05622775.1| chemotaxis protein MotB [Treponema vincentii ATCC 35580] gi|257444994|gb|EEV20070.1| chemotaxis protein MotB [Treponema vincentii ATCC 35580] Length = 238 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 11/164 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 +M ++ + L + +S + + + GI+IS+ F ++S+ Sbjct: 76 SMPAMEKGKMLGTALKKAVSIFAPEIKTNKIAVTSDERGIVISLAAD---SFFARNSAEL 132 Query: 245 L-PETIVVLQKIGEVLAHST---EVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVL 299 E+ L +I + L+ I GHTD+S NW LS RA + L Sbjct: 133 NIEESRETLLRIAQFLSDKELAARRFRIEGHTDSSDALSGKWTSNWELSAARAINVLHNL 192 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 G ED+ I+G+A R +++ NRR+DI++ D Sbjct: 193 TDFGAQEDKF-SIAGYADTRPVYSNETAEGRAYNRRVDIIILDD 235 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 2/74 (2%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN--PFGKNLMT 78 W Y D +T+++ FF++++ + D +A+ + P G ++ Sbjct: 3 RKKKGANAPGSGWLTTYGDMVTLMLCFFVMLYEPSEVDITRLQALSASISGDPTGGSISL 62 Query: 79 ASKGIFDEQNPPER 92 ++ + D N Sbjct: 63 SAGKLADLGNTISS 76 >gi|229175219|ref|ZP_04302735.1| OmpA/MotB domain protein [Bacillus cereus MM3] gi|228608355|gb|EEK65661.1| OmpA/MotB domain protein [Bacillus cereus MM3] Length = 234 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 36 GGTGNKEFLSDQKPNDEKELSASSLEAEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 95 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 96 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 149 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227 >gi|205354747|ref|YP_002228548.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858882|ref|YP_002245533.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205274528|emb|CAR39567.1| putative outer membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710685|emb|CAR35045.1| putative outer membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261248795|emb|CBG26648.1| putative outer membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301160182|emb|CBW19704.1| putative outer membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 209 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 69 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 125 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + SG Sbjct: 126 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 181 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 182 PANPIASNSTAEGKAQNRRVEITL 205 >gi|107099070|ref|ZP_01362988.1| hypothetical protein PaerPA_01000079 [Pseudomonas aeruginosa PACS2] Length = 449 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 7/136 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L D + V E +++I +F +S+ E +L +I + L Sbjct: 312 LADDIKAQRVAVEDAVDRSVVTIRGDE---LFASASASVRDEFQPLLLRIADALRKVKGQ 368 Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + + GH+D P NW+LS RA +L + R + G + ++ Sbjct: 369 VLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTA-EGRSDTEPVASN 427 Query: 325 DPM--NSANRRIDILV 338 + NRR++I V Sbjct: 428 ASAEGRARNRRVEITV 443 >gi|222035267|emb|CAP78012.1| Inner membrane lipoprotein yiad [Escherichia coli LF82] gi|312948118|gb|ADR28945.1| putative outer membrane lipoprotein [Escherichia coli O83:H1 str. NRG 857C] gi|320193935|gb|EFW68568.1| Outer membrane protein A precursor [Escherichia coli WV_060327] Length = 219 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GSHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTSEGKAQNRRVEITL 216 >gi|221209714|ref|ZP_03582695.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] gi|221170402|gb|EEE02868.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] Length = 428 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 7/134 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + +++ R MF + ++ KI +A Sbjct: 295 LKDEIAAGTVSVDEDARRSVVTF---RGDAMFRPGGASVQVSMNPLIAKIAAEIAKVPGK 351 Query: 266 ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 ++I G+TD P R N LS +RA Q+L +GV +R+ + G + Sbjct: 352 VTIVGYTDNVPIRSGQFASNQALSEERATQVMQMLQAAGVQANRLEAV-GKGDANPVGDN 410 Query: 325 DPM--NSANRRIDI 336 + NRR++I Sbjct: 411 RTAQGRAQNRRVEI 424 >gi|152986735|ref|YP_001350031.1| hypothetical protein PSPA7_4687 [Pseudomonas aeruginosa PA7] gi|150961893|gb|ABR83918.1| lipoprotein, putative [Pseudomonas aeruginosa PA7] Length = 237 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV + I + + F S+ P L + Sbjct: 87 DKQEAELRRQMEGTGVEVQRQGDDIKLIM---PGNITFATDSANIAPSFYAPLNNLANSF 143 Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I I G+TD++ + N LS RA S L GV R+S G Sbjct: 144 KQYNQNTIEIVGYTDST---GSRQHNMDLSQRRAQSVAGYLTAQGVDGTRLST-RGMGPD 199 Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343 + ++ + NRR+++ + G Sbjct: 200 QPIASNSTADGRAQNRRVEVNLRPVPG 226 >gi|33595424|ref|NP_883067.1| hypothetical protein BPP0729 [Bordetella parapertussis 12822] gi|33599804|ref|NP_887364.1| hypothetical protein BB0815 [Bordetella bronchiseptica RB50] gi|33565502|emb|CAE40138.1| putative outer membrane protein [Bordetella parapertussis] gi|33567401|emb|CAE31314.1| putative outer membrane protein [Bordetella bronchiseptica RB50] Length = 426 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 4/111 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290 R +F+ + VL ++ E L + I +RG+TD P R NW LS Sbjct: 301 RGDGLFESGAVAVRDRYAPVLARVAEALGQTRGDIVVRGYTDNVPIRTARFPSNWHLSQA 360 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 RA + V+ R+ + G +D NRR++I V Sbjct: 361 RAEAVKAVIDARLGQAGRV-RAEGRGEADPLAPNDTPAGRSVNRRVEITVM 410 >gi|196039232|ref|ZP_03106538.1| chemotaxis protein MotB [Bacillus cereus NVH0597-99] gi|218905736|ref|YP_002453570.1| chemotaxis protein MotB [Bacillus cereus AH820] gi|225866485|ref|YP_002751863.1| chemotaxis protein MotB [Bacillus cereus 03BB102] gi|196029859|gb|EDX68460.1| chemotaxis protein MotB [Bacillus cereus NVH0597-99] gi|218538809|gb|ACK91207.1| chemotaxis protein MotB [Bacillus cereus AH820] gi|225788965|gb|ACO29182.1| chemotaxis protein MotB [Bacillus cereus 03BB102] Length = 262 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 64 GGTGNKEFLSDQKPNDEKELSASSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 123 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 177 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255 >gi|83718754|ref|YP_443463.1| OmpA domain-containing protein [Burkholderia thailandensis E264] gi|167621163|ref|ZP_02389794.1| OmpA domain protein [Burkholderia thailandensis Bt4] gi|257137752|ref|ZP_05586014.1| OmpA domain-containing protein [Burkholderia thailandensis E264] gi|83652579|gb|ABC36642.1| OmpA domain protein [Burkholderia thailandensis E264] Length = 311 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 85/281 (30%), Gaps = 18/281 (6%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 P + A + + + + G + Sbjct: 34 DNVGPATVTPIDAGGVSVKSTPLAAPGAAANGTGTGAIVSSPPPANAAPGQVVAGGKVAD 93 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKG--------KDLCKSTDLEKSINKEENYFLPPL 178 L + + N + + ++ K + + + Sbjct: 94 EATKAAVLQRLRDTYGAANVVDQIEVGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGT 153 Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + + + + Q LA +++ L+ I G+ + G+L + R F+ Sbjct: 154 QIDVKGEVHNEAQRQQLASDMANALNPTYM--IKNGLRVSASEQGLLDQTLANRTIE-FE 210 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ P+ +L ++ LA I GHTD N LS RA + Sbjct: 211 TGSATLTPQGRTILDQMAGALAKMPNRTVEIIGHTDN---SGNRASNIALSQSRADAVKG 267 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 L+ G++ +++ +G + ++D + NRRI+ Sbjct: 268 YLVTKGIASQQLTT-TGVGPDQPIASNDSADGRARNRRIEF 307 >gi|221196011|ref|ZP_03569058.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] gi|221202685|ref|ZP_03575704.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221176619|gb|EEE09047.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221182565|gb|EEE14965.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] Length = 484 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 7/134 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + +++ R MF + ++ KI +A Sbjct: 351 LKDEIAAGTVSVDEDARRSVVTF---RGDAMFRPGGASVQASMNPLIAKIAAEIAKVPGK 407 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 ++I G+TD P R+ N LS +RA Q+L +GV +R+ + G + Sbjct: 408 VTIVGYTDNVPIRSRQFASNQALSEERATQVMQMLQAAGVQANRLEAV-GKGDADPVGDN 466 Query: 325 DPM--NSANRRIDI 336 + NRR++I Sbjct: 467 RTAQGRAQNRRVEI 480 >gi|146329003|ref|YP_001209240.1| OmpA family protein [Dichelobacter nodosus VCS1703A] gi|146232473|gb|ABQ13451.1| OmpA family protein [Dichelobacter nodosus VCS1703A] Length = 202 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 9/133 (6%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IR 269 + + + + FD S PE +Q++ + L + + Sbjct: 63 EQAPAQQVEQVLETEVKTFSADTYFDFDKSSLKPEGKAAIQQLAQELNQRGANVRKITVI 122 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 G+TD+ + N +LS RA + L+++GV I + G + ++D Sbjct: 123 GNTDS---KGSDAYNQKLSERRARAVSNYLIENGVPAS-IIEAYGNGERQPVASNDTEAG 178 Query: 328 NSANRRIDILVED 340 + NRR+DI V+ Sbjct: 179 RAQNRRVDIAVDG 191 >gi|126440077|ref|YP_001060632.1| ompA family protein [Burkholderia pseudomallei 668] gi|126219570|gb|ABN83076.1| ompA family protein [Burkholderia pseudomallei 668] Length = 310 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 84/277 (30%), Gaps = 16/277 (5%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + G+ + P + S +T + + Sbjct: 34 PATVTPIDAGGVPVKSVPLAAPVTAAPVAATAGAGATVSPPPPANATPGQVVAGGKVADE 93 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + Q ++ + +T S N ++ K + Sbjct: 94 ATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQ 153 Query: 192 LQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTPMFDKSSS 242 + + + +A ++ + T + G+ +S +Q T F+ S+ Sbjct: 154 IDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSA 213 Query: 243 IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 P+ +L ++ LA + I GHTD N LS RA + L+ Sbjct: 214 TLTPQGRAILDQMAGALAKMSNRTVEIIGHTDN---SGNRTSNIALSQARADAVKGYLVT 270 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 G++ +++ +G + +D + NRRI+ Sbjct: 271 KGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRIEF 306 >gi|308273873|emb|CBX30473.1| hypothetical protein N47_K27130 [uncultured Desulfobacterium sp.] gi|308275118|emb|CBX31717.1| hypothetical protein N47_E52290 [uncultured Desulfobacterium sp.] Length = 355 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 16/182 (8%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 K + K + + PP + E+ R + L N KG Sbjct: 183 PKVEETPKVVEPPKAAEEPPKAVEEPPKAVEPPRTDSDGDGVYDDLDKCP--NTPKGATV 240 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276 + IL FD + L + +L + V+ + ++ ++GHTD+ Sbjct: 241 DCRGCWIL-------QGVYFDTAKWNILSKYFPILDNVVSVIKKNPDMKLEVQGHTDSR- 292 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334 A+ N +LS +RA S + + GV I GF +D + NRR+ Sbjct: 293 --GTAKYNRKLSENRAKSVVEYFVSKGVDRS-ILTAKGFGFTVPAAPNDNAEDMAKNRRV 349 Query: 335 DI 336 ++ Sbjct: 350 EL 351 >gi|291286826|ref|YP_003503642.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290883986|gb|ADD67686.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 368 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 69/212 (32%), Gaps = 17/212 (8%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + +E K + K E + K+E + + + + D Sbjct: 161 GKAPKPMAPKAEPAKTVVKEELAEAKVQKKEAAAVVKKDSDGDGVFDDEDQCPDTPDGYP 220 Query: 201 STLSGLVADNIVKGVLFETTRTGILIS---------IIDQRNTPMFDKSSSIPLPETIVV 251 G D GV R I + F +SS + Sbjct: 221 VNAMGCTPDTDGDGVYDFEDRCPNTIKGVKVNSAGCFTARTLDVRFKTNSSEIDESYVDD 280 Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRI 309 + + + S I I+GH D+ N LS RA S ++L + G++E+RI Sbjct: 281 IILFVKFMKDSPAINIEIQGHADSR---GTDDYNMVLSEKRAKSVAKMLTEKYGIAENRI 337 Query: 310 SKISGFAHHRLKIASDPMN--SANRRIDILVE 339 + G+ + +D NRRID ++ Sbjct: 338 -SVIGYGETKPIAPNDSPENMRKNRRIDTVIR 368 >gi|332996878|gb|EGK16497.1| inner membrane lipoprotein yiaD [Shigella flexneri K-272] gi|333013437|gb|EGK32809.1| inner membrane lipoprotein yiaD [Shigella flexneri K-227] Length = 219 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSAPLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|308173338|ref|YP_003920043.1| motility protein MotB [Bacillus amyloliquefaciens DSM 7] gi|307606202|emb|CBI42573.1| motility protein B; MotB component of the stator flagellum complex [Bacillus amyloliquefaciens DSM 7] gi|328911414|gb|AEB63010.1| motility protein B; MotB component of the stator flagellum complex [Bacillus amyloliquefaciens LL3] Length = 267 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 79/192 (41%), Gaps = 7/192 (3%) Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 + +++ ++ KE+ + Q+L + + Sbjct: 72 PPENEKDGIDQLKKDKDKEKEKEKDKEQKKKEREAADRQELEGVQKQVNQFIKNKKLEHQ 131 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTD 273 + + T+ G+LI+I D FD ++ E I + ++I +L + I I GHTD Sbjct: 132 LETKLTKEGLLITIKDS---IFFDSGQAVIRQEDIPLAKEISNLLVLNPPRNIIISGHTD 188 Query: 274 ASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330 P +N NW LS+ RA + +L ++ + ++ GF ++ ++ Sbjct: 189 NVPIKNSQFQSNWHLSVMRAVNFMAILTENPKLDAKVFSAKGFGEYKPAASNKTAEGRSK 248 Query: 331 NRRIDILVEDRQ 342 NRR+++L++ R Sbjct: 249 NRRVEVLIQPRN 260 >gi|283787805|ref|YP_003367670.1| outer membrane protein [Citrobacter rodentium ICC168] gi|282951259|emb|CBG90953.1| putative outer membrane protein [Citrobacter rodentium ICC168] Length = 220 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMQGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + SG Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGQDLNMRLSQQRADSVASALITQGVEAGRI-RTSGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|163744900|ref|ZP_02152260.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45] gi|161381718|gb|EDQ06127.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45] Length = 221 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 54/139 (38%), Gaps = 10/139 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + V+ T +++++ +F S+ P L + + + Sbjct: 86 EAELRAAMDSRVVITNTGDRLIVTLPQD---ILFATDSTSVAPGLRDDLAALAQNVNIYQ 142 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + GHTD+ A N +LS RA + +L+ +GV + R+ G + Sbjct: 143 NSTLQVVGHTDSD---GEAAYNQQLSERRAQAVGNILLSNGVPQQRLQTF-GRGESQPVA 198 Query: 323 ASDPMNSA--NRRIDILVE 339 ++ NRR++I++ Sbjct: 199 SNLSAAGKSQNRRVEIVIL 217 >gi|295095145|emb|CBK84235.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 220 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMKGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAA 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV +RI + SG Sbjct: 137 VLKEYNKTAVNVIGYTDST---GSQDLNMRLSQQRADSVASSLIAQGVEANRI-RTSGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|303236640|ref|ZP_07323221.1| OmpA family protein [Prevotella disiens FB035-09AN] gi|302483144|gb|EFL46158.1| OmpA family protein [Prevotella disiens FB035-09AN] Length = 286 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 76/215 (35%), Gaps = 14/215 (6%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 Q K S +T+ + + ++ ++ K + L Sbjct: 58 EDQLAQAKASAQALQGSLDKSLSNTNSTNINISKLVDQINESNQYIRHLVEVKSKSDSLN 117 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 +S+ L+ ++ +K V + + + IS+ D ++ S L KI Sbjct: 118 LVLSNNLTRSLSKEELKEVDVQVLKGVVYISLADNM---LYKSGSYEISDRAEETLSKIA 174 Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIAR------DNWRLSLDRAYSAYQVLMKS-GVSEDR 308 +++ ++ I G+TD P + +NW LS RA S Q L GV R Sbjct: 175 KIITDYSDYDVLIEGNTDNVPVNAQSERMKNIRNNWDLSCLRASSVVQYLQTRFGVDPKR 234 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 ++ G + +D NRR I++ + Sbjct: 235 LTAG-GRGEYNPLATNDTELGKQRNRRTQIIITPK 268 >gi|283835926|ref|ZP_06355667.1| OmpA family protein [Citrobacter youngae ATCC 29220] gi|291068103|gb|EFE06212.1| OmpA family protein [Citrobacter youngae ATCC 29220] Length = 220 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD +SS P L + Sbjct: 80 YMDVQEAKLREKMQGTGVSVTRSGDNIILNM---PNNVTFDSNSSNLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G TD++ N RLS RA S L+ GV+ +RI + G Sbjct: 137 VLKEYDKTAVNVLGFTDST---GSQDLNMRLSQQRADSVASALITQGVAANRI-RTQGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|332977323|gb|EGK14111.1| OmpA/MotB family protein [Psychrobacter sp. 1501(2011)] Length = 552 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 55/175 (31%), Gaps = 7/175 (4%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 I+ + L L + A + + + + +A+ + Sbjct: 332 IDAPDQAQLDKLVADIKAAAPELNVIAAGPLDLDAEIKQSIANATTAMDNLGENPDPKDV 391 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 + F+ + VL + EV+ + + I GHTD+ N Sbjct: 392 ARALSLQVINFEVDKADIPEVNKAVLDRAVEVMKNVPNMQLMILGHTDSD---GDDAHNQ 448 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 LS RA S Q L+ GV ++ G + N NRRI+ V Sbjct: 449 ELSQRRAESVKQYLVSKGVDASKLMT-KGMGETDPIATNQTDNGKFRNRRIEFTV 502 >gi|312884285|ref|ZP_07743994.1| hypothetical protein VIBC2010_10946 [Vibrio caribbenthicus ATCC BAA-2122] gi|309368058|gb|EFP95601.1| hypothetical protein VIBC2010_10946 [Vibrio caribbenthicus ATCC BAA-2122] Length = 125 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288 ++ + F+ S L + L ++I G+TD+ A N +LS Sbjct: 13 EEYGSGTFEFDSCKLTQSVAERLDNLANFLNEYPTSRVAITGYTDS---SGPAAYNLKLS 69 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA + L+ +G+ E R++ +G + + NRR+++++ Sbjct: 70 EMRAQAVKDYLISAGIEEARLTA-TGLGENNPVADNCTHEGREKNRRVEVVI 120 >gi|157889021|dbj|BAF80966.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + PE +Q++G++L + + +I GHTD++ N +LSL+RA + Sbjct: 224 FGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDST---GSKTYNQKLSLERAKAV 280 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + L K+GV++++I G+ + K ++D + NRR++ Sbjct: 281 AKELEKTGVAKEKIVT-KGYGFEKPKASNDTKEGRAQNRRVE 321 >gi|255534563|ref|YP_003094934.1| putative flagellar motor protein MotB [Flavobacteriaceae bacterium 3519-10] gi|255340759|gb|ACU06872.1| putative flagellar motor protein MotB [Flavobacteriaceae bacterium 3519-10] Length = 300 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 69/165 (41%), Gaps = 10/165 (6%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + + L +S+ L + + V + + ++IS+ D+ ++ Sbjct: 125 QQLISTNAKNDSLNLALSNKLKRSLDNIADDDVQVKVLKGVVMISLSDKM---LYKTGDY 181 Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299 +P VL K+ +V+ I G+TD P + +DNW LS RA S ++L Sbjct: 182 NVMPAAQEVLGKVAQVINDYDTYSVLIEGNTDNVPLSSANLPKDNWDLSALRATSMAKIL 241 Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 GV+ RI+ G + + K + + NRR +I++ + Sbjct: 242 QTKFGVNPARITAG-GRSEYNPKTTNASVSGRAENRRTEIIIMPK 285 >gi|49081952|gb|AAT50376.1| PA0833 [synthetic construct] Length = 238 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV + I + + F S+ P L + Sbjct: 87 DKQEAELRRQMEGTGVEVQRQGDDIKLIM---PGNITFATDSANIAPSFYAPLNNLANSF 143 Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I I G+TD++ + N LS RA S L GV R+S G Sbjct: 144 KQYNQNTIEIVGYTDST---GSRQHNMDLSQRRAQSVAGYLTAQGVDGTRLST-RGMGPD 199 Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343 + ++ + NRR+++ + G Sbjct: 200 QPIASNSTADGRAQNRRVEVNLRPVPG 226 >gi|116619472|ref|YP_821628.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116222634|gb|ABJ81343.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 267 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 74/194 (38%), Gaps = 8/194 (4%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 S L + K + + + DLAK + + GL ++ Sbjct: 62 SAISTVLGRGKHEAKKAPLSQQTTEERENPTAPPPRPAETHPPDLAKSLDTLQKGLDSEL 121 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + G++IS+ R F P ++ +L KI V+ + + G Sbjct: 122 KNGKLQLRLDPRGLIISM---REATFFASGDDAVAPGSLPILTKIAAVVQSLPNPVRLEG 178 Query: 271 HTDASPFR-NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328 HTD+ P + R NW LS R+ + ++L + R+ ++G+A + ++ Sbjct: 179 HTDSRPIHTSRFRSNWELSAARSIAMLELLRDRFQIPASRM-AVAGYAENAPADTNETEE 237 Query: 329 SA--NRRIDILVED 340 NRR+D+++ Sbjct: 238 GRAHNRRVDLVLLS 251 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 52/166 (31%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 P N W + YADF+T+L AFF+VM+ +D + +A+ ++ +S Sbjct: 3 RKKAPEPENHERWLVSYADFITLLFAFFVVMFASTQSDKNKARAVSDSVREALEHGQFSS 62 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 + + + E + + + + + +S+ Sbjct: 63 AISTVLGRGKHEAKKAPLSQQTTEERENPTAPPPRPAETHPPDLAKSLDTLQKGLDSELK 122 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + ++T + LP L+K + Sbjct: 123 NGKLQLRLDPRGLIISMREATFFASGDDAVAPGSLPILTKIAAVVQ 168 >gi|330722438|gb|EGH00277.1| Flagellar motor rotation protein MotB [gamma proteobacterium IMCC2047] Length = 130 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + IS+ GHTD+ P R NW LS RA S L K GV ++GFA Sbjct: 8 LKNVEGKISVEGHTDSVPIATSVFRSNWDLSSARALSVAHELFKGGVLNSNRFMVTGFAD 67 Query: 318 HRLKIASD--PMNSANRRIDILVED 340 + +A+D + NRR++I++ Sbjct: 68 AKPLVANDNAANRAKNRRVEIIIHQ 92 >gi|153003419|ref|YP_001377744.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152026992|gb|ABS24760.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5] Length = 205 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 7/118 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286 +++ +N +FD +S+ E + L ++G++LA + I I GHTD+ N Sbjct: 90 LVNMKNDILFDTNSADLKGEAVTQLTQVGDILAKYADDRIRIEGHTDS---SGSDSLNEA 146 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS RA S VL+ GV E++I + G + + + NRR+++ ++ Sbjct: 147 LSRKRADSVRTVLVSRGVREEQI-TVVGNGETKPIADNATKEGRAKNRRVELHIDVPN 203 >gi|78189221|ref|YP_379559.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins-like [Chlorobium chlorochromatii CaD3] gi|78171420|gb|ABB28516.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins-like protein [Chlorobium chlorochromatii CaD3] Length = 422 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 52/104 (50%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + PE++ + + +++ E S+ GHTD+ +N LS RA + Sbjct: 321 FDINKATIKPESMGTINYVVKMMQEHPELKFSVEGHTDSD---GADANNQTLSEARAQAI 377 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L++SG++++R++ G+ + ++ + NRR++ + Sbjct: 378 VNKLIESGIAKERLTS-KGWGESKPITNNETAEGKAQNRRVEFI 420 >gi|239908944|ref|YP_002955686.1| putative outer membrane protein [Desulfovibrio magneticus RS-1] gi|239798811|dbj|BAH77800.1| putative outer membrane protein [Desulfovibrio magneticus RS-1] Length = 345 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 50/143 (34%), Gaps = 8/143 (5%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 I L + + L I I+ + FD PE + VL++ Sbjct: 203 NCIELGEELLRNEAAREKFLECALYEWIEDEIV-VFRSIYFDFDKYNIKPEFVPVLEEGT 261 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 ++ T + I GHTD+ + N +L RA S +K G+ RI IS F Sbjct: 262 AIIKSKTGMKVILEGHTDSI---GTEQYNMKLGQRRADSVKAFFVKKGIDASRIETIS-F 317 Query: 316 AHHRLKIASDPM--NSANRRIDI 336 + + NRR I Sbjct: 318 GESDPVATNKTAQGRALNRRCVI 340 >gi|242280858|ref|YP_002992987.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] gi|242123752|gb|ACS81448.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] Length = 250 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 11/157 (7%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + K KK + L I + +S + + + T + G+L+ + +F ++ Sbjct: 93 SAKAKKDMHALEVDIRAFISAGKMEKL---MAVNTDQQGVLVRV---PTRAIFKPGTAQI 146 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV-LMKS 302 P+ V+L K+ ++ + +RGHTD +N NW LS RA S + L KS Sbjct: 147 NPKATVLLDKVASIMKKKDFNLVVRGHTDDRATKNNIYSSNWELSAARAASCLRYILKKS 206 Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 GVS R+ + G+A + + + + NRR++ Sbjct: 207 GVSSKRLKAV-GYAGTKPLVPNTSNRNRAINRRVEFY 242 >gi|163858178|ref|YP_001632476.1| hypothetical protein Bpet3863 [Bordetella petrii DSM 12804] gi|163261906|emb|CAP44208.1| OmpA-family protein [Bordetella petrii] Length = 215 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 20/170 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS +K+++ ++ L+G +A R ++ I + + Sbjct: 43 ELSARLESEVKQRQEETQRRIELEQALAGPLAAG----------RVTLVDGRIGISGSVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S PE VL+ + L EV+ + G TD P DNW LS Sbjct: 93 FALNSDELQPEGEEVLKSLVGPLSAYLQARDEVLMVSGFTDNQPVHGNNRRFADNWDLSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 RA + + L++ G++ + + F + ++D NRR++I+ Sbjct: 153 QRALTVTRALIEQGIAPASVFAAA-FGAEQPVASNDSAEGRASNRRVEIV 201 >gi|107023374|ref|YP_621701.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116690456|ref|YP_836079.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia HI2424] gi|170733777|ref|YP_001765724.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia MC0-3] gi|254247501|ref|ZP_04940822.1| Outer membrane porin F [Burkholderia cenocepacia PC184] gi|105893563|gb|ABF76728.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116648545|gb|ABK09186.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424] gi|124872277|gb|EAY63993.1| Outer membrane porin F [Burkholderia cenocepacia PC184] gi|169817019|gb|ACA91602.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3] Length = 215 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F + P +L + L + +V SI G+TD++ + N LS + Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQVTASIVGYTDST---GSQQLNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L++ GV+ R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNALVQRGVNGGRLSA-QGMGPSNPIADNATEAGRAQNRRVEIYLRAPQ 212 >gi|228917149|ref|ZP_04080707.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929558|ref|ZP_04092577.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935820|ref|ZP_04098632.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948234|ref|ZP_04110518.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229093607|ref|ZP_04224708.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42] gi|229124075|ref|ZP_04253267.1| OmpA/MotB domain protein [Bacillus cereus 95/8201] gi|228659377|gb|EEL15025.1| OmpA/MotB domain protein [Bacillus cereus 95/8201] gi|228689816|gb|EEL43622.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42] gi|228811592|gb|EEM57929.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823877|gb|EEM69697.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830137|gb|EEM75755.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842567|gb|EEM87657.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 234 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 36 GGTGNKEFLSDQKPNDEKELSASSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 95 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 96 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 149 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227 >gi|293412987|ref|ZP_06655655.1| conserved hypothetical protein [Escherichia coli B354] gi|291468634|gb|EFF11127.1| conserved hypothetical protein [Escherichia coli B354] Length = 219 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDAGRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|254282997|ref|ZP_04957965.1| outer membrane fibronectin-binding protein [gamma proteobacterium NOR51-B] gi|219679200|gb|EED35549.1| outer membrane fibronectin-binding protein [gamma proteobacterium NOR51-B] Length = 227 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ + VL E + + GH D+ N LS RA + Sbjct: 125 FAFDSAELPADAASVLADAVEFVDAMGGKKLIVSGHADS---SGPDAYNQSLSQRRADAV 181 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 L++SG+ E ++ + G+ + + NRR++I Sbjct: 182 KAFLVESGIPERQLEAV-GYGETMPVADNATASGRAQNRRVEI 223 >gi|261417399|ref|YP_003251082.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373855|gb|ACX76600.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327366|gb|ADL26567.1| putative chemotaxis MotB protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 216 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 11/172 (6%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE-TTRTGILISIID 230 +++ + Q+ +KI++ + L++ ++ + I I Sbjct: 34 ATLKEQKAEDLTRTEEEVLSCQEQMRKIAAERNALLSKSLQTSIEAGLIALEDGKIQIQA 93 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARD-NWR 286 +F + + E V++ I + L ST+VI + G TD PF NW Sbjct: 94 S---FLFPINGANLTKEGEGVIRGISKGLLEALDSTDVIMVSGFTDDIPFSGSTSYTNWN 150 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 LS +RA + ++L+K G DR+ GF HR K +D NRR++I Sbjct: 151 LSTERAVNVVKMLVKMGFPPDRLFAA-GFGEHRPKYPNDSEEHRRLNRRVEI 201 >gi|110834272|ref|YP_693131.1| OmpA family protein [Alcanivorax borkumensis SK2] gi|110647383|emb|CAL16859.1| OmpA family protein [Alcanivorax borkumensis SK2] Length = 221 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 12/201 (5%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD--LAKKISS 201 + + + K + ++ KE+ LA + + + Sbjct: 24 PYTGEKQTSKATSGAAIGAVAGALIGIATSDSAKERKERALAGAGIGAVTGGGVGYYMDV 83 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + L GV I++++ F S+ P VL+ + EVL Sbjct: 84 QEAKLRQKLEGAGVSVTRDGENIILNM---PGNLTFATDSTDVKPSFDPVLEAVAEVLKE 140 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 +I + GHTD++ R N LS RA + L GV + R+ + GF + Sbjct: 141 YKSTMIQVAGHTDST---GGDRYNLLLSQQRAQAVSNKLSAFGVEQVRLDPV-GFGETQP 196 Query: 321 KIASDPMNSA--NRRIDILVE 339 ++ + NRR+++ + Sbjct: 197 IASNSSASGREQNRRVELTLL 217 >gi|310778794|ref|YP_003967127.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926] gi|309748117|gb|ADO82779.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926] Length = 208 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 74/216 (34%), Gaps = 11/216 (5%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 I + + + +S ++ + K+ + + N + + A Sbjct: 1 MKKIVVMLAALAALSGCSSADEETAMLNKMEKNLNKIEENNATTGSMIDQYKTRILDAKT 60 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 L+ I S ++ ++ LI D +FD + S + Sbjct: 61 NVANLEKDINAIDSFINPETVFEKNGVIVKRERDQLTLIMPTD----VVFDFNKSEIKED 116 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L + E L + I GHTD N +LS RA SA + L+ G++ Sbjct: 117 FKPLLDSLYEALTIYKGLSVKIDGHTDNI---GSYDYNLKLSQKRAESAKEYLVSKGLNA 173 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 RI G + ++ NRRI+++++ Sbjct: 174 GRIIT-EGHSFSTPAASNATQAGRDKNRRIEVVIKK 208 >gi|282877998|ref|ZP_06286806.1| OmpA family protein [Prevotella buccalis ATCC 35310] gi|281299833|gb|EFA92194.1| OmpA family protein [Prevotella buccalis ATCC 35310] Length = 288 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 66/165 (40%), Gaps = 14/165 (8%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + K + L +++ L+ ++ +K V + + + IS+ D ++ S Sbjct: 109 EVKSKSDSLNMVLTNNLTRSLSREELKEVDVQVLKGVVYISLADNM---LYKSGSYEIND 165 Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRAYSAYQVL 299 L KI +++ + + G+TD P + R+NW LS RA S Q L Sbjct: 166 RAAETLSKIAKIIMDYKDYDVLVEGNTDNVPVNQNSPLMKNIRNNWDLSTLRASSVVQFL 225 Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 GV R++ G + +++ NRR I++ + Sbjct: 226 QSHYGVDPKRMTAG-GRGEYNPLTSNNTELGKQRNRRTQIIITPK 269 >gi|91217489|ref|ZP_01254448.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC 700755] gi|91184374|gb|EAS70758.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC 700755] Length = 280 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 9/148 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + ++L G + + + + + + +SI D+ +F E VL K+ V Sbjct: 121 LVTSLKGALGNINDEDIQINVEKGVVFVSISDKL---LFGAGQFKVTAEAKRVLGKVATV 177 Query: 259 LAHSTEV-ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGF 315 + + + GHTD P R DNW LS RA + ++L + V R++ G Sbjct: 178 VNDKKDFEFMVEGHTDNDPISRTNIEDNWDLSTKRATAVVRILQDEYDVDPKRMTAA-GR 236 Query: 316 AHHRLKIASDPMNS--ANRRIDILVEDR 341 + +D NRR I++ + Sbjct: 237 GEYIPVANNDTEAGQSKNRRTRIVILPK 264 >gi|51246518|ref|YP_066402.1| flagellar motor protein (MotB) [Desulfotalea psychrophila LSv54] gi|50877555|emb|CAG37395.1| related to flagellar motor protein (MotB) [Desulfotalea psychrophila LSv54] Length = 249 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 6/151 (3%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + + K + L A I V I+I +D + +F + S P + ++ Sbjct: 90 IDNTKKIHEKIKNKLKALRINSEVELINKDKDIIILRMDDK--VLFARGQSEISPRSYML 147 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRIS 310 L+ I +++ + I GH+D P NW LS RA SA + + +S DR+S Sbjct: 148 LRNIADIIRPLPVNVRIEGHSDDIPLGINNIANWNLSTSRAVSALRFFYRGNLISLDRLS 207 Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVE 339 I G+ + + NRR+D ++ Sbjct: 208 AI-GYGDMHPIAPNTTEENRAKNRRVDFVLR 237 >gi|85713659|ref|ZP_01044649.1| OmpA/MotB [Nitrobacter sp. Nb-311A] gi|85699563|gb|EAQ37430.1| OmpA/MotB [Nitrobacter sp. Nb-311A] Length = 463 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + P++I +L ++ E L T I I GHTD A N LS RA + Sbjct: 361 FETGKATLDPDSIGLLDQLTETALRCPTATIEIVGHTDGD---GDASFNQALSERRAQAV 417 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 ++K+G+ +R I G+ + +D + NRRID +V Sbjct: 418 VDFMVKAGLPANRFRPI-GYGSAQPIATNDTDEGKAKNRRIDFIVRQ 463 >gi|312892404|ref|ZP_07751899.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] gi|311295188|gb|EFQ72362.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] Length = 452 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS+ + +L L + I++ G+ + A N +LS DRA S Sbjct: 353 FEFDSSVLRTSSYPILDATSADLRTGKKSITVNGYASSE---GTAAHNLQLSKDRANSVK 409 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L+ SGV RI + G + + NRR++ Sbjct: 410 TYLVNSGVDAKRIK-VKGLGETHPIADNSTEDGRVLNRRVEF 450 >gi|284035678|ref|YP_003385608.1| V-type H(+)-translocating pyrophosphatase [Spirosoma linguale DSM 74] gi|283814971|gb|ADB36809.1| V-type H(+)-translocating pyrophosphatase [Spirosoma linguale DSM 74] Length = 890 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 7/114 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + F+ + PE+ V L + ++L + + G+TD + A N +LS Sbjct: 781 DFDRLTFETGKATLKPESQVQLGNVAQILKAYPNVNVKVGGYTDNT---GNANANLKLSG 837 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 +RA S L K G+ + R+ G+ ++D + NRRI + V + Sbjct: 838 ERASSVEAELEKLGIDKSRLEA-EGYGQEHPVASNDTEEGRAQNRRISMRVTKK 890 >gi|119476926|ref|ZP_01617207.1| ompA family protein [marine gamma proteobacterium HTCC2143] gi|119449733|gb|EAW30970.1| ompA family protein [marine gamma proteobacterium HTCC2143] Length = 213 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 10/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + S L GV I + + + F+ S + VL+ +G Sbjct: 73 YMDVQESALREQLQGSGVRVVREGDNIRLIM---PGSITFETDSYVLRRSFSPVLESVGL 129 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VLA E ++ + GHTD + + N RLS DRA S LM GV +R+ I G Sbjct: 130 VLAKYNETMMRVTGHTDNT---GGEQYNQRLSEDRAQSVASNLMSQGVDGNRLY-IQGSG 185 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQ 342 ++ ++NRR+++ + Sbjct: 186 ETMPIADNNTSSGRASNRRVELYILPNN 213 >gi|241663267|ref|YP_002981627.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12D] gi|240865294|gb|ACS62955.1| OmpA/MotB domain protein [Ralstonia pickettii 12D] Length = 431 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 90/273 (32%), Gaps = 11/273 (4%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 + + + I P+R + + + +V G + Sbjct: 153 LVHQWSPVEVIPSAATTPQRRHVTIANSAAEHQRIHVAVSNPSGGAVEPSDVLITVGMPV 212 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + Q + S L ++ S+ L + KR Sbjct: 213 QEAAPSQELSPQRSWRLIVIAVVVTALVIGLAWVTYRQHLDNQALASQVSALEAQVAKRQ 272 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + L +I+ L+ F + G I I+ F S+ P L Sbjct: 273 EPLEDRIARALTSET-----GASQFGLSTEGDRIYIVFSSGMG-FAAGSADITPMLARQL 326 Query: 253 QKIGEVLAHSTEVISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 +++ VL + ++I GHTD SP R N LS RA + + L G+SE R+S Sbjct: 327 ERLAGVL-TTDGKVTIVGHTDDSPGARGRTETNLALSAARAMAVGRNLQAHGLSETRLST 385 Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G + NRR++I+++ ++ Sbjct: 386 M-GRGAKEPVGDNKTAEGRALNRRVEIVLDRQR 417 >gi|57505781|ref|ZP_00371707.1| outer membrane protein OprF [Campylobacter upsaliensis RM3195] gi|57016054|gb|EAL52842.1| outer membrane protein OprF [Campylobacter upsaliensis RM3195] Length = 316 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + P +Q I +VL + + +I GHTD + N +LS RA Sbjct: 212 FEFDKTTINPAFESRIQNIAKVLEENEKYNTILEGHTDNT---GSRAYNQKLSERRAQRV 268 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 LMK GV + RI ++ G+ + + +++ NRR++ Sbjct: 269 ANELMKFGVDKKRI-EVKGYGQDKPRSSNETKEGRADNRRVE 309 >gi|222054259|ref|YP_002536621.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] gi|221563548|gb|ACM19520.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] Length = 242 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 50/141 (35%), Gaps = 9/141 (6%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + +++ + +FD L K L S Sbjct: 99 QAAALKKNLPEAEVVRDGDKVYVAL---PSGILFDLGKDALKSGAKESLSKAAATLKASE 155 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I ++GHTD++ N LS RA L +GV R++ + G+ R +A Sbjct: 156 TNIVVQGHTDST---GSDAINQPLSERRAKQVRDFLTANGVPAFRLTAV-GYGSSRPAVA 211 Query: 324 SDP--MNSANRRIDILVEDRQ 342 +D + NRR+ + + + Sbjct: 212 NDTDANRALNRRVQLEISPNE 232 >gi|70728526|ref|YP_258275.1| OmpA family protein [Pseudomonas fluorescens Pf-5] gi|68342825|gb|AAY90431.1| OmpA family protein [Pseudomonas fluorescens Pf-5] Length = 262 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 30/238 (12%), Positives = 74/238 (31%), Gaps = 11/238 (4%) Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 + + + + ++ + + D + + + Sbjct: 21 STPPNANLENARTNFSALQANPQASKVAALETKDAADWMDKADKAYLNKDDEKKVDQLAY 80 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + + + A + K D + + + + T G L++ Sbjct: 81 LTNQRVEVAKETIALRTAEAKLKDAGDQRARAILDARDAQIKQLQDSLNAKQTDRGTLVT 140 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 D +F + S +V + K+ + L + + + G+TD++ N Sbjct: 141 FGD----VLFATNKSDLKSSGLVNINKLAQFLQQNPDRKVIVEGYTDST---GSDSYNQS 193 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 LS RA S L++ G+ RI G+ + + NRR+++ + + Sbjct: 194 LSERRAGSVQMALIRMGIDPARIVS-QGYGKEYPVADNGSVSGRAMNRRVEVTISNDN 250 >gi|262395314|ref|YP_003287167.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25] gi|262338908|gb|ACY52702.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25] Length = 430 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 10/162 (6%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 ++ + + ++++IS L+ + + + E + + IS+ Q +F Sbjct: 270 QPQQLNQDTTSESKSAPISERISMYLATEIGKGL---INVEPLQDRVRISLKSQD---LF 323 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAY 296 + S+ + V+ K+ L + I + GHTD P + NW LSL RA + Sbjct: 324 ESGSADVVAYIQPVISKLARTLESTQGKIIVTGHTDDRPIFTSKYPSNWHLSLARATAMS 383 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 + L+ + E R+ G R + + D + NRRI+I Sbjct: 384 EQLISNSTLEGRVIP-EGLGDARPLVENNSDENRAINRRIEI 424 >gi|167835831|ref|ZP_02462714.1| ompA family protein [Burkholderia thailandensis MSMB43] Length = 215 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F + P +L + L + ++ S+ G+TD++ A N LS + Sbjct: 103 PSSVTFATNQYAVTPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAYNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + V+ R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNALSQRSVAASRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212 >gi|153870010|ref|ZP_01999498.1| OmpA/MotB [Beggiatoa sp. PS] gi|152073520|gb|EDN70498.1| OmpA/MotB [Beggiatoa sp. PS] Length = 296 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 78/278 (28%), Gaps = 9/278 (3%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + + + D Q P R+S+ + + LK + Sbjct: 19 LSTAVITVQAAGDRDTYHLLDSQGQPVRTSRPEECVETPNTANTPIQLLKECGDVSDRDG 78 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + ++ ++ E K KG L D + Y P + + Sbjct: 79 DGIFDDEDVCPDNTPEELVKGVHQSGPRKGCSLDSDNDSVPDYRSDCPYNTPLEISKGVD 138 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + L + V + + F + Sbjct: 139 SRGCP--LDSDQDGVPDYKDLCPGTPFGIAVDENGCALSGPVVTRTLQGDVTFAFDKAAL 196 Query: 245 LPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 P+ L+ + + I + GHTD+ N +LS RA S + L Sbjct: 197 TPQAKTTLEGLINEFGLDFIKGIEVIGHTDSI---GKDSYNQKLSEQRAASVVRYLQVLN 253 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 V+ +I+ G +D + NRR++I +E Sbjct: 254 VNTSKINGW-GEGERNPVAPNDTREGRAQNRRVEIKIE 290 >gi|15595276|ref|NP_248768.1| hypothetical protein PA0078 [Pseudomonas aeruginosa PAO1] gi|116054405|ref|YP_788234.1| hypothetical protein PA14_00925 [Pseudomonas aeruginosa UCBPP-PA14] gi|254243187|ref|ZP_04936509.1| hypothetical protein PA2G_03990 [Pseudomonas aeruginosa 2192] gi|296386560|ref|ZP_06876059.1| hypothetical protein PaerPAb_00450 [Pseudomonas aeruginosa PAb1] gi|9945903|gb|AAG03468.1|AE004447_1 hypothetical protein PA0078 [Pseudomonas aeruginosa PAO1] gi|115589626|gb|ABJ15641.1| hypothetical protein PA14_00925 [Pseudomonas aeruginosa UCBPP-PA14] gi|126196565|gb|EAZ60628.1| hypothetical protein PA2G_03990 [Pseudomonas aeruginosa 2192] Length = 449 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 7/136 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L D + V E +++I +F +S+ E +L +I + L Sbjct: 312 LADDIKAQRVAVEDAVDRSVVTIRGDE---LFASASASVRDEFQPLLLRIADALRKVKGQ 368 Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + + GH+D P NW+LS RA +L + R + G + + Sbjct: 369 VLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTA-EGRSDTEPVATN 427 Query: 325 DPM--NSANRRIDILV 338 + NRR++I V Sbjct: 428 ASAEGRARNRRVEITV 443 >gi|304398041|ref|ZP_07379916.1| OmpA/MotB domain protein [Pantoea sp. aB] gi|304354327|gb|EFM18699.1| OmpA/MotB domain protein [Pantoea sp. aB] Length = 219 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD +SS P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRNGDNIVLNM---PNNVTFDSNSSNLKPAGANTLTGVSM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV+ DR+ + G Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSRALNMRLSQQRAESVASALIVQGVASDRL-RTQGAG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 + + NRR++I + Sbjct: 193 PDNPVATNSTEAGKAQNRRVEITL 216 >gi|300024878|ref|YP_003757489.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526699|gb|ADJ25168.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 387 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 81/280 (28%), Gaps = 14/280 (5%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK--QYQR 126 FNP + + D+ S + +++ G T Sbjct: 109 FNPDYAANSSDAPAASDDAAEAAPSGSETSGEAAATQTAEDTSPPPTGGTATTDYYGGSP 168 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 N + + ++ + + +E + + EE+ PP + Sbjct: 169 SPQNPAWAAPAKMNPDYSSEPAAPAETAQPAATEAPAAAASPAEEDAAPPPTGGKATTDY 228 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR-----TGILISIIDQRNTPMFDKSS 241 + + E ++ + T F++ S Sbjct: 229 YGGSAAPNNPAWAEPAKMNPDYNAATAPAASEAAAPSGEACRETVATNAKAATLRFNEDS 288 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + P + L + L V+ +RG TD+ + N LS RA L Sbjct: 289 AAIAPASRTALSALVTALKACAGVVVEVRGFTDSV---GSSEGNQMLSELRAKKIVDFLT 345 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 K+GV +++ + G ++ NRR++ ++ Sbjct: 346 KAGVEASKLTAV-GKGEDDPVADNETPEGRRLNRRVEFVL 384 >gi|218893200|ref|YP_002442069.1| hypothetical protein PLES_44851 [Pseudomonas aeruginosa LESB58] gi|218773428|emb|CAW29240.1| hypothetical protein PLES_44851 [Pseudomonas aeruginosa LESB58] Length = 237 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV + I + + F S+ P L + Sbjct: 87 DKQEAELRRQMEGTGVEVQRQGDDIKLIM---PGNITFATDSANIAPSFYAPLNNLANSF 143 Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I I G+TD++ + N LS RA S L GV R+S G Sbjct: 144 KQYNQNTIEIVGYTDST---GSRQHNMDLSQRRAQSVAGYLTALGVDGTRLST-RGMGPD 199 Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343 + ++ + NRR+++ + G Sbjct: 200 QPIASNSTADGRAQNRRVEVNLRPVPG 226 >gi|170703075|ref|ZP_02893898.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|170132016|gb|EDT00521.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] Length = 215 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 ++ F + P +L + L + + S+ G+TD++ A+ N LS + Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQLTASVVGYTDST---GSAQLNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L++ GV+ R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNALVQRGVAGGRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212 >gi|296100590|ref|YP_003610736.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055049|gb|ADF59787.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 220 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMKGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV +RI + SG Sbjct: 137 VLKEYNKTAVNVIGYTDST---GSQELNMRLSQQRADSVASSLITQGVEANRI-RTSGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|255622212|ref|XP_002540262.1| conserved hypothetical protein [Ricinus communis] gi|223497476|gb|EEF22121.1| conserved hypothetical protein [Ricinus communis] Length = 160 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 5/107 (4%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292 +F +S+I LPE+ L + +V+ I GHTD + + N LS RA Sbjct: 49 RILFQANSAIILPESYADLDIVYDVVKEWGNDKVEIAGHTDKRN-TSKEKYNLVLSEKRA 107 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 + L+K G+ R+ + G+ + +DP N ANRR++++ Sbjct: 108 KAVADYLVKKGMDAQRLV-VKGYGFSQPIAENDPVSGNDANRRVEVI 153 >gi|162449977|ref|YP_001612344.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] gi|161160559|emb|CAN91864.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 274 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 18/218 (8%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + Q++ K+ L + + + L N L ++ +R ++L+D Sbjct: 48 AEQAQNKKAKSELDEAAARIEQLKSQLKAAGVDISNLNANLEQQARALEDFRRRAQQLED 107 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + K+ L + G+ ++I + +FD E +L K Sbjct: 108 IKKRFE-VLRDKLQALTKLGLSVTVRNNRMVIQL---PGDVLFDSGRETLKKEGQEILLK 163 Query: 255 IGEVLAHSTE----VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMK------SG 303 + EV+ + + + GHTD +P +DNW LS+ RA L++ G Sbjct: 164 VAEVIRNDSGLSARSFQVAGHTDNAPLAGGRFKDNWGLSVMRAREVLAFLLQPEDKGGGG 223 Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 + +R SG+ +D ANRR +++V Sbjct: 224 LKPER-WSASGYGDTDPVKPNDTPENKQANRRCELVVL 260 >gi|149372159|ref|ZP_01891429.1| putative flagellar motor protein MotB [unidentified eubacterium SCB49] gi|149354926|gb|EDM43488.1| putative flagellar motor protein MotB [unidentified eubacterium SCB49] Length = 287 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 78/244 (31%), Gaps = 11/244 (4%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 + + + + K E + + + + + + + T L Sbjct: 28 QTKQKETEDLLNTATVKLNSCLTEKSAAIVKAEGLEDRLNDLKASNQQLIESSKDLTILT 87 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD--NIVKGVLFETTRT 222 L L + + + + L + +S L + + + + Sbjct: 88 SKGADNLEKSLESLKERDLKITRLQDALSKKDSVTLALVSSLKKEVGMNDQDIQINVEKG 147 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281 + IS+ D+ +F S +L K+ V+ + + GHTD P+ Sbjct: 148 VVFISLSDK---VLFKSGSYNLSTRANEILGKVATVINGKPDFEALVEGHTDNVPYNGGG 204 Query: 282 R--DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 DN LS RA + + L+ G + ++ G + + + + NRR I Sbjct: 205 VLIDNLDLSAKRATAVVRQLISLGANPSQLIAA-GRGEFVPLVPNTSVENKTLNRRTKIY 263 Query: 338 VEDR 341 + + Sbjct: 264 ILPK 267 >gi|282880441|ref|ZP_06289148.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1] gi|281305544|gb|EFA97597.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1] Length = 298 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 69/165 (41%), Gaps = 14/165 (8%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + K + L +++ L+ ++ +K V + + + IS+ D ++ +S Sbjct: 121 EVKSKSDSLNMVLTNNLTRSLSREELKEVDVQVLKGVVYISLADNM---LYKTASYEIND 177 Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA------RDNWRLSLDRAYSAYQVL 299 L KI +++ E + G+TD P + R+NW LS RA S Q L Sbjct: 178 RAAETLSKIAKIIMDYKEYDVLVEGNTDNVPVNPNSPLMKNIRNNWDLSTLRASSVVQYL 237 Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 K+ GV R++ G + +++ NRR I++ + Sbjct: 238 QKNYGVDPKRMTAG-GRGEYNPLTSNNTELGRQRNRRTQIIITPK 281 >gi|152982971|ref|YP_001354367.1| outer membrane protein A precursor [Janthinobacterium sp. Marseille] gi|151283048|gb|ABR91458.1| outer membrane protein A precursor [Janthinobacterium sp. Marseille] Length = 206 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 7/103 (6%) Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + PE L + L + I GHTD+ N +LS+ RA + L+ Sbjct: 107 VLKPEGKAKLDDLTSKLNGLNLEVIIAVGHTDSV---GSDAYNQKLSVRRAEAVKAYLVG 163 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 GV R+ G + + + NRR++I V + Sbjct: 164 KGVDAKRVYT-EGKGEKQPVATNKTAAGRAQNRRVEIEVVGTR 205 >gi|154508489|ref|ZP_02044131.1| hypothetical protein ACTODO_00990 [Actinomyces odontolyticus ATCC 17982] gi|153798123|gb|EDN80543.1| hypothetical protein ACTODO_00990 [Actinomyces odontolyticus ATCC 17982] Length = 403 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 85/301 (28%), Gaps = 26/301 (8%) Query: 51 MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110 + + A+ N T S I + S + + + Sbjct: 113 LVSGSTVLGGDGSAVSSSDKGTVVNDGTGSGVITEGPISIIYGGDGSGTYSNADTMVTIT 172 Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 V+ T + + + S + D T + Sbjct: 173 VEADGSGTYSTTTTSIILDGNGGGNYSNATSMESIINNGDGSGQFSKGTVTIINNG---- 228 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF----ETTRTGILI 226 + ++ + I+ + K G +I Sbjct: 229 -DGTGSYSDEKLTIQNNGNGTATVNGVTINDAPKVEKVGKLGKFPAVESLKPVESCGTVI 287 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNW 285 ++ D +FD S PE L+ + VL + I GHTD+ + N Sbjct: 288 TLED---GVLFDFGKSDIRPEAAQTLKSLAGVLNNAKVPTAHIYGHTDSI---SDEAFNL 341 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDIL 337 +LS +RA + L K GVS I +G+ + ++ + NRR++I Sbjct: 342 QLSQERADAVSAELKKDGVSA--ILDATGYGESKPVAPNENADGSDNPAGRALNRRVEIF 399 Query: 338 V 338 + Sbjct: 400 I 400 >gi|221069812|ref|ZP_03545917.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1] gi|220714835|gb|EED70203.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1] Length = 219 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D + FD + +L + E L ++ + I GHTD++ N LS Sbjct: 106 DIPSDISFDTGRADIKSNFAPILDRFAEGLRNNPNAEVRIIGHTDST---GSDAINNPLS 162 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 L RA S L GV+ RI ++ G H+ ++ + NRR++I V +R Sbjct: 163 LQRAESTRNYLTSRGVNGARI-QVQGMGSHQPVASNATNEGRARNRRVEIFVGER 216 >gi|253699032|ref|YP_003020221.1| OmpA/MotB domain protein [Geobacter sp. M21] gi|251773882|gb|ACT16463.1| OmpA/MotB domain protein [Geobacter sp. M21] Length = 459 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + PE + +G + ++ GHTD N LS RA S Sbjct: 228 FDIDKAEIRPEYKDEVATVGNFMKQYPTTTAVIEGHTDNV---GNPEYNLDLSKRRAQSV 284 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ + G+ R+ GF R A+ NRRI+ +++ Sbjct: 285 VDYLVDNYGIERSRLEA-RGFGMARPIAANSTDEGRQANRRIEAIID 330 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 86/235 (36%), Gaps = 12/235 (5%) Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 L+ K + + + + ++ + + +L+ S + ++ Sbjct: 224 LQGEFDIDKAEIRPEYKDEVATVGNFMKQYPTTTAVIEGHTDNVGNPEYNLDLSKRRAQS 283 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL-ISIIDQ 231 + I + + R +A+ I++ + + + + D+ Sbjct: 284 VVDYLVDNYGIERSRLEARGFGMARPIAANSTDEGRQANRRIEAIIDCAFDVKEVQPPDR 343 Query: 232 RNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRL 287 + FD + P + K+GE + ++ GHTD + N +L Sbjct: 344 LCMTLLLEFDSGKADIKPLYRGEMAKVGEYMNKYPTTTAVIEGHTDNV---GGSDYNMKL 400 Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 S RA +A Q L+++ G+ + R+S G+ + R + + NRRI+ +++ Sbjct: 401 SQQRAENAVQYLVQNFGIDKSRLSA-KGYGYTRRIAYNSTPEGRAKNRRINAVID 454 >gi|157889001|dbj|BAF80950.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F PE +Q++G+VL + + +I GHTD++ N +LSL+RA + Sbjct: 224 FGFDQISINPEFAQKIQEVGKVLEENPQYYTILEGHTDST---GSKVYNQKLSLERAKAV 280 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + L KSGV++++I G+ + K ++D + NRR++ Sbjct: 281 AKELEKSGVAKEKI-ATKGYGFDKPKASNDTKEGRAQNRRVE 321 >gi|154247748|ref|YP_001418706.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus Py2] gi|154161833|gb|ABS69049.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2] Length = 729 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 79/279 (28%), Gaps = 15/279 (5%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 S D Q P + DE + +R Sbjct: 458 MQAVKAPPAGVSVVTDDLQPPAISPYVFSVRREGDELTVSGFYPDAAAHAAIRAALERDF 517 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 S G T + + L + A + Sbjct: 518 LREKVNDVSAVGGGAPAGFLPAVLSGLTQLSRTGTGEISIVDGQLRLTGTALTSAAASEM 577 Query: 189 KKRLQDLAK---KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 L+ + + + + VA +L R T F S+ Sbjct: 578 DAELKRAVRPPFMVETAIDAAVAPPPADTPTCGRQVGELL-----ARGTIRFASGSAEID 632 Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + ++ ++ L ++ I GHTD A N RLS RA + L+ +GV Sbjct: 633 RHSRGLIDRLAVALKRCPTAMVRILGHTDGV---GDAEFNKRLSEARANAVLAYLVTAGV 689 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + DR+S GF + +D NRRI+ V++R Sbjct: 690 TADRLSAA-GFGAGQPLAPNDTEAGKALNRRIEFEVKER 727 >gi|209965863|ref|YP_002298778.1| outer membrane protein OmpA (probable proton motor MotY) [Rhodospirillum centenum SW] gi|209959329|gb|ACI99965.1| outer membrane protein OmpA (probable proton motor MotY) [Rhodospirillum centenum SW] Length = 281 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 74/244 (30%), Gaps = 23/244 (9%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + Q L + +Q + + L + + E Sbjct: 34 PPLARVQQELADARTENVAAQAPVAFQEAERSVQRAQSRLGSAGEAEMEHLTYLAEVRLQ 93 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR----- 232 ++ + A + ++ Q L + S L D + + + Q Sbjct: 94 TARAEAQAARFREERQSLVAQRESILRSAREDQLALARTVAEEDRQRIQQLESQLQQYQA 153 Query: 233 -----------NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNI 280 + FD S+ P L+ + E L + I GHTD+ Sbjct: 154 RETEAGTVLTLSNINFDLDSATLSPGDRQRLRPLVEYLRSQPDRAVLIEGHTDSQ---GP 210 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A N LS RA + L+ G+ RI+ G +++ NRRI++ V Sbjct: 211 AAYNEELSQRRAEAVRDFLVDQGIQAARITT-RGLGEGVPVASNETQAGRLQNRRIEVTV 269 Query: 339 EDRQ 342 E+ Sbjct: 270 ENPP 273 >gi|161520025|ref|YP_001583452.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189353793|ref|YP_001949420.1| OmpA/MotB family outer membrane protein [Burkholderia multivorans ATCC 17616] gi|160344075|gb|ABX17160.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616] gi|189337815|dbj|BAG46884.1| OmpA/MotB family outer membrane protein [Burkholderia multivorans ATCC 17616] Length = 220 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F + P L K+ A + +S+ G+TD+ N LS R Sbjct: 114 GDALFASGLATLTPAARASLDKLLNAHADRSYTQVSVTGYTDSV---GSDASNLALSKRR 170 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 A + L + G++ R ++G ++ NRR++I ++ Sbjct: 171 AEAVAAYLQQRGLNA-RTLTVTGRGSADPIASNATAEGRATNRRVEISLQR 220 >gi|119897129|ref|YP_932342.1| outer membrane protein [Azoarcus sp. BH72] gi|119669542|emb|CAL93455.1| conserved hypothetical outer membrane protein [Azoarcus sp. BH72] Length = 224 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288 D + FD PE VL + L T +SI GHTD++ N LS Sbjct: 110 DIPSDVSFDTGRYDIKPEMRPVLDRFANTLNQHTVTTVSIIGHTDST---GSDAVNNPLS 166 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 ++RA + L+ GV+ RI I G + + NRR++I V Sbjct: 167 VNRAAATRDYLVARGVAGSRI-AIDGRGAREPIADNGTVAGRAQNRRVEIFV 217 >gi|296127617|ref|YP_003634869.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563] gi|296019433|gb|ADG72670.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563] Length = 403 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 15/153 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 ++ L + D+ V +T G+++ + +FD S PE + Sbjct: 262 KEEEDYNRKKLENDLYDD--DNVTIDTVPEGLVVRL----GEILFDTDSYTLRPEAKNTI 315 Query: 253 QKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 I + + + + GHTD + N LS RA S + + D++ Sbjct: 316 DNIVKAIKETYPDREIIVEGHTDNT---GRKEYNQELSEKRAKSVADY-ILPNLEHDKL- 370 Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 G A ++D NRR+DI+++ R Sbjct: 371 SYKGLADEEPIASNDTADGRQKNRRVDIIIKLR 403 >gi|305666954|ref|YP_003863241.1| OmpA family protein [Maribacter sp. HTCC2170] gi|88709183|gb|EAR01417.1| OmpA family protein [Maribacter sp. HTCC2170] Length = 217 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 54/142 (38%), Gaps = 8/142 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + G GI ++ ++ FD S S + L K+ + Sbjct: 69 QAERIEEEIPGAEVTRVGEGINVTFNEEAG-VYFDTSKSNVKGTSATTLDKLAGIFKEYP 127 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I GHTD+ N +LS RA S L+ G+ +R S + ++ K Sbjct: 128 NSDVLIEGHTDS---AGPDDYNMKLSQQRAESVTNYLISKGIEANRFST-KWYGENQPKA 183 Query: 323 ASDPMN--SANRRIDILVEDRQ 342 ++ + NRR+++ + + Sbjct: 184 DNETTEGKAKNRRVELAIIASK 205 >gi|157889011|dbj|BAF80958.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + PE +Q++G+VL + + +I GHTD++ N +LSL+RA + Sbjct: 224 FGFDQTSINPEFAQKIQEVGKVLEENPQYYTILEGHTDST---GSKTYNQKLSLERAKAV 280 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + L KSGV++++I G+ + K ++D + NRR++ Sbjct: 281 AKELEKSGVAKEKI-ATKGYGFDKPKASNDTKEGRAQNRRVE 321 >gi|320354509|ref|YP_004195848.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320123011|gb|ADW18557.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032] Length = 212 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 8/104 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD +SS P L +I VL + + + GHTDA + N +LS RA + Sbjct: 110 FFDTNSSQLKPGAYNELNRITNVLNNYPQTTIRVEGHTDAR---GSDQYNQQLSERRAMA 166 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 L + GV+ RI + G+ + +SD + NRR++I++ Sbjct: 167 VKNALAQQGVNPSRIEAV-GYGESQPISSSD---AMNRRVNIVI 206 >gi|134095751|ref|YP_001100826.1| putative outer membrane protein 3a (II*;G;d) [Herminiimonas arsenicoxydans] gi|133739654|emb|CAL62705.1| Putative outer membrane protein OmpA [Herminiimonas arsenicoxydans] Length = 205 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 7/103 (6%) Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + P+ L + L + I GHTD+ N +LS+ RA + L+ Sbjct: 106 VLKPDGKAKLDDLASKLKDLNLEVIIAVGHTDSI---GSDAYNQKLSIRRAEAVKGYLVG 162 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 G+ R+ G + + + NRR++I V + Sbjct: 163 KGIDAKRVYT-EGKGEKQPVATNKTAAGRAQNRRVEIEVVGTR 204 >gi|116327052|ref|YP_796772.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332289|ref|YP_802007.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119796|gb|ABJ77839.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125978|gb|ABJ77249.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 458 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 12/143 (8%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + V T GI IS+ N+ +FD +SS E + L++I VL Sbjct: 321 ENKTKQETMKVSGSPVEIRRTEEGIAISL----NSVLFDYNSSQLKDEAKLELRRIASVL 376 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAH 317 + I I GHTD N +LS +RA S + L + G+ E R+ G+ Sbjct: 377 KKYGDREIRISGHTDN---SGGDEYNRKLSRERALSVLKELRDEQGLEEKRM-SYEGYGK 432 Query: 318 HRLKIASDPM--NSANRRIDILV 338 + + NRR+DI + Sbjct: 433 SKPIADNSTAQGRQKNRRVDITI 455 >gi|242277509|ref|YP_002989638.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] gi|242120403|gb|ACS78099.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] Length = 241 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 72/221 (32%), Gaps = 13/221 (5%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + D ++ K S L ++ + + E +R Sbjct: 23 LADMMTLLLCFFVLLLAIADVDQKKYKDVSDSLASAMGVDVPPKGANDTYEGAPVARRVI 82 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 Q + + + + I + + F + Sbjct: 83 SDQQRNIFEMQLEMARLVGRESDALKIKMRPDSVAIVL---KGGFFFPSGQADLTSGARR 139 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRI 309 VL KI LA S + + GH+D P R+ NW LS RA + + L+ +G S+DRI Sbjct: 140 VLGKIAPTLAKSPYQVVVEGHSDNIPIRSKQFPSNWELSSARASAVARYLLDNGFSKDRI 199 Query: 310 SKISGFAHHRLKIASDPMNS--------ANRRIDILVEDRQ 342 + G A ++ N NRR+ +LV + Sbjct: 200 K-VLGMADTAPAYPNEDDNGNAIPANQKRNRRVVLLVYPPK 239 >gi|171915499|ref|ZP_02930969.1| OmpA/MotB domain protein [Verrucomicrobium spinosum DSM 4136] Length = 355 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 97/302 (32%), Gaps = 20/302 (6%) Query: 53 IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 + KA NP A + I D P ++ ++ ++ + + D Sbjct: 55 SMLPVTQTKAKADRIAINPEALKEQQAIQHIPDLIAPSDK-AEPQLKADLQDIAEMIPED 113 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + T + + + + + D G DL S D KS + Sbjct: 114 RPLNLTPDVDKVTNFLAPKSNPNATSPAHAPSMAAIADMAPGPDLASSMDAIKSSALRQA 173 Query: 173 YFLPPLSKEKILAMKRKK--------RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 L K + RL + +K + + + ++ +L Sbjct: 174 VSDQQLVLPAKPLDKELEGMDGKLLDRLNNQSKAGDGSPRAMAGYSNLEDLLARGGAVNA 233 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 + I +F+ S + L K+G ++ + I GHTD A Sbjct: 234 STAPIMLPTDLLFEYGSDQLAENARLSLMKLGYLITKNPNSRFIIEGHTDTI---GSAEF 290 Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI---ASDPMN--SANRRIDIL 337 N LS RA + L++S +S DRI + G R + + NRR++I Sbjct: 291 NLDLSQRRANAVVGWLIRSLRLSNDRIDAV-GMGESRPLARVNPNGTKEEQALNRRVEIK 349 Query: 338 VE 339 V Sbjct: 350 VR 351 >gi|328946962|ref|YP_004364299.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489] gi|328447286|gb|AEB13002.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489] Length = 488 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 77/204 (37%), Gaps = 11/204 (5%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 K+S + + + S K+ K K+K ++ KI Sbjct: 293 ESEKKSSGSIEKNDFESGANSRRNNSYAEKKIAKNENQTYGAKNHPQKKKDSADEIQSKI 352 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S+ + K V+ E T GI +++ + F SS LP L +I +VL Sbjct: 353 SAGKNSSSNSKSEKKVIVENTAAGIRLTMQNLN----FKPDSSELLPGENERLDQIAQVL 408 Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + + GHT + + +LS++RA S L++ G+ ++ G Sbjct: 409 KEVPDQMFLVEGHTASVGYEKGE---MKLSVERANSVANALIQRGIPREKFI-CKGSGGT 464 Query: 319 RLKIASDPMN--SANRRIDILVED 340 + + + NRR++I + + Sbjct: 465 KPIADNSTPEGKAKNRRVEITILE 488 >gi|254447788|ref|ZP_05061253.1| OmpA family protein [gamma proteobacterium HTCC5015] gi|198262568|gb|EDY86848.1| OmpA family protein [gamma proteobacterium HTCC5015] Length = 225 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 59/176 (33%), Gaps = 10/176 (5%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 I+ ++ + A + + + L GV E I + Sbjct: 51 IDNKDADSDKRQERILEAAGGGALIGGGVGYYMDRQEAKLREKLRDSGVSVERDGDNINL 110 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNW 285 + F SS VL + VL ++++ GHTD++ N Sbjct: 111 IM---PGNITFQTDSSDVSSSFYNVLDSVAIVLEEFDKTIVAVSGHTDST---GSDSYNQ 164 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 LS RA S L GV +R ++ GF R + + NRR++I + Sbjct: 165 VLSEKRASSVASYLKSKGVLNERF-EVIGFGEARPIADNSTESGREQNRRVEITLL 219 >gi|82701882|ref|YP_411448.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196] gi|82409947|gb|ABB74056.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196] Length = 225 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 7/116 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288 D + FD + P VL L ++ ++I GHTD+ N LS Sbjct: 108 DIPSDISFDTGRADIRPNFRPVLDSFATSLNNNPITEVTIIGHTDS---SGSDAVNNPLS 164 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+RA S L GVS +R+ +I G +A+D + NRR++I V + + Sbjct: 165 LNRAASTRDYLASRGVSPNRV-RIEGRGSREPIVANDTPQNRARNRRVEIYVAEPK 219 >gi|244538688|dbj|BAH82838.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F PE +Q++G+VL + + +I GHTD++ N +LSL+RA + Sbjct: 224 FGFDQISINPEFAQKIQEVGKVLEENPQYYTILEGHTDST---GSKTYNQKLSLERAKAV 280 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + L KSGV++++I G+ + K ++D + NRR++ Sbjct: 281 AKELEKSGVAKEKI-ATKGYGFDKPKASNDTKEGRAQNRRVE 321 >gi|153837220|ref|ZP_01989887.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810] gi|260366108|ref|ZP_05778568.1| flagellar motor protein [Vibrio parahaemolyticus K5030] gi|260879749|ref|ZP_05892104.1| flagellar motor protein [Vibrio parahaemolyticus AN-5034] gi|260896795|ref|ZP_05905291.1| flagellar motor protein [Vibrio parahaemolyticus Peru-466] gi|260903584|ref|ZP_05911979.1| flagellar motor protein [Vibrio parahaemolyticus AQ4037] gi|149749483|gb|EDM60237.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810] gi|308087342|gb|EFO37037.1| flagellar motor protein [Vibrio parahaemolyticus Peru-466] gi|308092264|gb|EFO41959.1| flagellar motor protein [Vibrio parahaemolyticus AN-5034] gi|308109501|gb|EFO47041.1| flagellar motor protein [Vibrio parahaemolyticus AQ4037] gi|308114754|gb|EFO52294.1| flagellar motor protein [Vibrio parahaemolyticus K5030] Length = 430 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 7/144 (4%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 A L + V E + + IS+ Q +F+ S+ + V+ K+ Sbjct: 285 APIAERISMYLATEIGKDLVTVEALQDRVRISLKAQD---LFESGSASVVAYIQPVISKV 341 Query: 256 GEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + I I GHTD P + NW LSL RA S + L+ + + R+ G Sbjct: 342 ARTLEATQGKIIITGHTDDRPIFTSKYPSNWHLSLARATSLSEQLISNSALKGRVIP-EG 400 Query: 315 FAHHRLKIASDPM--NSANRRIDI 336 R + +D + NRRI+I Sbjct: 401 LGDARPLVENDSEKNRAMNRRIEI 424 >gi|74316262|ref|YP_314002.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259] gi|74055757|gb|AAZ96197.1| probable outer membrane protein [Thiobacillus denitrificans ATCC 25259] Length = 331 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 85/247 (34%), Gaps = 15/247 (6%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 E + + ++ + + ++ RLE ++ ++Q + + Sbjct: 88 AIAQETAKRKAAEISVTEASAERDRVRLEARTAEVAAARQQATQAELTAQQQAERDRALI 147 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + + + + + RL+ + + + Sbjct: 148 AEREAEVEAARQQAATAEEAARQRADALEAARLEIQRAQTRIAEQEEQLQALN----AKK 203 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFR 278 T G+++++ D +F + + P + +QK+ + L I GHTD++ Sbjct: 204 TDRGLVVTLGD----VLFGVNKADLTPGGMRNVQKLADFLKQYETRKLLIEGHTDST--- 256 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 N LS RA + L+ GV +RI G+ +++ NRR+++ Sbjct: 257 GGDALNQALSERRAEAVKTALIGMGVDGERI-ATRGYGKAFPVASNNTAAGRQLNRRVEV 315 Query: 337 LVEDRQG 343 ++ + G Sbjct: 316 VLSENGG 322 >gi|28900895|ref|NP_800550.1| hypothetical protein VPA1040 [Vibrio parahaemolyticus RIMD 2210633] gi|28809341|dbj|BAC62383.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] Length = 433 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 7/144 (4%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 A L + V E + + IS+ Q +F+ S+ + V+ K+ Sbjct: 288 APIAERISMYLATEIGKDLVTVEALQDRVRISLKAQD---LFESGSASVVAYIQPVISKV 344 Query: 256 GEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + I I GHTD P + NW LSL RA S + L+ + + R+ G Sbjct: 345 ARTLEATQGKIIITGHTDDRPIFTSKYPSNWHLSLARATSLSEQLISNSALKGRVIP-EG 403 Query: 315 FAHHRLKIASDPM--NSANRRIDI 336 R + +D + NRRI+I Sbjct: 404 LGDARPLVENDSEKNRAMNRRIEI 427 >gi|118578882|ref|YP_900132.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM 2379] gi|118501592|gb|ABK98074.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379] Length = 417 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 87/278 (31%), Gaps = 22/278 (7%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQ--NKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 +YF L + + Q + + T+ + + Sbjct: 146 AKYFLNDKVALRGDVRHLIYRQASETQHAVEYTMGLHFPFGGKTEAAPVAEPAPEPVVAP 205 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL--EKSINKEENYFLPPLSKE 181 +++ + ++ + + KG L D + N + + Sbjct: 206 VAPSDSDGDGVFDTADNCPGTPQGVKVDAKGCPLDSDRDGVYDYQDNCPGTPEGVKVDTK 265 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 K + D K T G D V + T + I FD + Sbjct: 266 GCPLDSDKDGVYDSYDKCPGTPEGTTVDKTGCPVKL-CSPTVLNIE---------FDTNK 315 Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 S P+ L+++ + LA +I GHTD N +LS RA S L+ Sbjct: 316 SNIKPQYNDELKRVADFLAEFPTAKGAIEGHTDNV---GGKAYNMKLSQRRANSVRSYLI 372 Query: 301 KS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 K+ V+ +RIS G + ++ + NRRI+ Sbjct: 373 KTFNVAPERISA-KGHGLTKPVASNKTADGRKQNRRIE 409 >gi|126664984|ref|ZP_01735967.1| flagellar motor protein MotD [Marinobacter sp. ELB17] gi|126630354|gb|EBA00969.1| flagellar motor protein MotD [Marinobacter sp. ELB17] Length = 261 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 67/188 (35%), Gaps = 8/188 (4%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 G+ + PLS R + LQ+LA ++ Sbjct: 59 APERSVVPITVGEQPVAGGRSDTDAVIAPVVTEAPLSLPAPDNASRSRALQELAGQLGQE 118 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 S L+ + + +++ N+ +F + P ++ V++KI VL + Sbjct: 119 FSALIEGG---VISLNADDEWLQLNL---PNSLLFGSGDAEPHYDSFAVMEKIAGVLRDT 172 Query: 263 TEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I I G TD R NW LS RA ++L+ G+ R++ + G+ H+ Sbjct: 173 DNAIRIEGFTDNQSIRSGRFPSNWELSAARASVLVRMLVMDGIDPARLAAV-GYGEHQPV 231 Query: 322 IASDPMNS 329 +D Sbjct: 232 ARNDTDEG 239 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 1/136 (0%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 ++++ D ++ W I YADF+T+L AFF+VM+ +++ ++ K + Sbjct: 1 MRRRKPPQDDFHHKERWLISYADFITLLFAFFVVMYSVSSVNEGKYKVLSNTLTGVFNAP 60 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 + I + P ++ D I +T+ + L + + + Sbjct: 61 ERSVVPITVGEQPVA-GGRSDTDAVIAPVVTEAPLSLPAPDNASRSRALQELAGQLGQEF 119 Query: 137 SQQSEHCKNSLTRDSE 152 S E SL D E Sbjct: 120 SALIEGGVISLNADDE 135 >gi|110637965|ref|YP_678172.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110280646|gb|ABG58832.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC 33406] Length = 641 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 7/129 (5%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273 + I I N FD + S E+ L K+ ++L+ + ++ + GHTD Sbjct: 516 IDDVICLDKIDIGTTIVLNNVFFDVNKSTLRKESETELDKLFDILSKNPKIKIEVAGHTD 575 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SAN 331 + + N LS RA++ L+ G+S DRI + G + + +D N Sbjct: 576 SD---GDTQANLTLSDARAHTVKDYLIGKGISADRIIYV-GHGEGKPVVPNDTPENKQLN 631 Query: 332 RRIDILVED 340 RR +I + + Sbjct: 632 RRTEIKILE 640 >gi|257463423|ref|ZP_05627818.1| Outer membrane porin F [Fusobacterium sp. D12] gi|317060987|ref|ZP_07925472.1| outer membrane porin F [Fusobacterium sp. D12] gi|313686663|gb|EFS23498.1| outer membrane porin F [Fusobacterium sp. D12] Length = 193 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 10/134 (7%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269 GV +++S+ +FD L+ + L ++++ I Sbjct: 67 NQDGVTIRREGNNLILSM---PELILFDFDKYEVKDGIKPSLRTLANALGANSDIKIKID 123 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 G+TD F N LS++RA + L+ G E+ I I G+ ++ Sbjct: 124 GYTD---FIGSEGYNLELSVNRAKAIKSYLVNHGAIENNI-SIEGYGKQNPVASNATESG 179 Query: 328 NSANRRIDILVEDR 341 + NRR++ ++ Sbjct: 180 RARNRRVEFIISRS 193 >gi|225873103|ref|YP_002754562.1| ompA family protein [Acidobacterium capsulatum ATCC 51196] gi|225791640|gb|ACO31730.1| ompA family protein [Acidobacterium capsulatum ATCC 51196] Length = 508 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 56/139 (40%), Gaps = 11/139 (7%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + + + + + G+++++ D +F S + L +I +L Sbjct: 345 MRNRLEQQLNAVLATRESARGLIVNMSD----VVFATGSYQIKTSAQIKLARIAGILMTY 400 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 + + G+TD A N +LS RA + + L+ GV + IS G+ Sbjct: 401 PGLKVQVEGYTDNV---GSAAFNQKLSNQRANAVMKFLISQGVKANSISA-KGYGEADPV 456 Query: 322 IASDP--MNSANRRIDILV 338 +++ + NRR+ ++V Sbjct: 457 ASNNTVAGRAKNRRVQLVV 475 >gi|328470797|gb|EGF41708.1| hypothetical protein VP10329_08362 [Vibrio parahaemolyticus 10329] Length = 430 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 7/144 (4%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 A L + V E + + IS+ Q +F+ S+ + V+ K+ Sbjct: 285 APIAERISMYLATEIGKDLVTVEALQDRVRISLRAQD---LFESGSASVVAYIQPVISKV 341 Query: 256 GEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + I I GHTD P + NW LSL RA S + L+ + + R+ G Sbjct: 342 ARTLEATQGKIIITGHTDDRPIFTSKYPSNWHLSLARATSLSEQLIANSALKGRVIP-EG 400 Query: 315 FAHHRLKIASDPM--NSANRRIDI 336 R + +D + NRRI+I Sbjct: 401 LGDARPLVENDSEENRAMNRRIEI 424 >gi|304384331|ref|ZP_07366742.1| lipoprotein PG3 [Prevotella marshii DSM 16973] gi|304334647|gb|EFM00929.1| lipoprotein PG3 [Prevotella marshii DSM 16973] Length = 226 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 6/149 (4%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 K + + A V T G+ + + +F + + + L Sbjct: 69 KHMDKVKAQTQAQVQNAKVEEVTDVNGLKAVKVTFDSGILFALNKAELNATSKNELMNFS 128 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL +T+ I+G+TD++ N LS RA + L + GV + + G+ Sbjct: 129 NVLKKNTDCQVDIQGYTDST---GNDDINLPLSNSRAQAVVSYLAQCGVPYSQFKNVKGY 185 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + NRR+++ + + Sbjct: 186 GSSNPVADNSTEAGRKQNRRVEVYIYAGE 214 >gi|166713623|ref|ZP_02244830.1| hypothetical protein Xoryp_19825 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 224 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS A+K+++ + + L+ +A R ++ I R + Sbjct: 43 QLSNRLDEAVKQRQAEAQRRQTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S PE VL+ + + L E++ + G TD P DNW LS Sbjct: 93 FAFNSDELQPEGREVLKSLAAPLAQYLRTREEILMVSGFTDDRPVLGGNRRYADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 RA + + L+ GV + + F + ++ + NRR++I Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADEARRAKNRRVEI 200 >gi|126736820|ref|ZP_01752555.1| OmpA domain protein [Roseobacter sp. SK209-2-6] gi|126721405|gb|EBA18108.1| OmpA domain protein [Roseobacter sp. SK209-2-6] Length = 205 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 55/150 (36%), Gaps = 10/150 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 ++ + L + T +++S + F S+ P L+ + Sbjct: 63 NQLDAQERELRQSLANDSISIVNTGDRLILSFPNDLT---FATDSAAISPVVQADLRSVA 119 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L + + GHTD+ A N LS RA + + GV R+ +I G Sbjct: 120 GSLVRYPNSTVQVIGHTDSD---GDASYNQGLSERRANAVADQIQAGGVPYHRL-RIIGL 175 Query: 316 AHHRLKIASDPMN--SANRRIDILVEDRQG 343 + ++ + NRR+++++ + G Sbjct: 176 GEEQPVASNLTPEGKARNRRVEVVIIPQAG 205 >gi|124022953|ref|YP_001017260.1| hypothetical protein P9303_12471 [Prochlorococcus marinus str. MIT 9303] gi|123963239|gb|ABM77995.1| Hypothetical protein P9303_12471 [Prochlorococcus marinus str. MIT 9303] Length = 252 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 55/158 (34%), Gaps = 16/158 (10%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L + + ++ L + + ++ + +FD + P + Sbjct: 99 DLDYQIQGLDYSMKDLTYSINDLNITTKQENEVLI----ELAADVLFDFDKANLKPSAVA 154 Query: 251 VLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L+ + + + + + + GHTD+ + N LS RA S + G + Sbjct: 155 SLETVAKRIRETSQGDVRVEGHTDS---KGSNEYNQTLSEKRAISVRDWFVSDGGLSNVQ 211 Query: 310 SKISGFAHHRLKIASDPM--------NSANRRIDILVE 339 GF + +++ NRR++I+++ Sbjct: 212 FVTKGFGELKPVVSNTTEKGGDNPIGRQRNRRVEIIIK 249 >gi|225619153|ref|YP_002720379.1| outer membrane protein OmpA family [Brachyspira hyodysenteriae WA1] gi|225213972|gb|ACN82706.1| outer membrane protein OmpA family [Brachyspira hyodysenteriae WA1] Length = 403 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 15/153 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 ++ L + ++ V +T G+++ + +FD S PE + Sbjct: 262 KEEEDYNRKKLEDNLYND--DNVTIDTVPEGLVLRL----GEILFDTDSYTLKPEAKNTI 315 Query: 253 QKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + + + + + GHTD + N LS RA S + + D++ Sbjct: 316 DNVIKAIKETYPDREIIVEGHTDNT---GRKEYNQDLSEKRAKSVADY-ILPNLDHDKL- 370 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 GFA ++D NRR+DI+++ R Sbjct: 371 SYKGFADDEPIASNDTPDGRRKNRRVDIIIKLR 403 >gi|117621479|ref|YP_855927.1| ompA family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562886|gb|ABK39834.1| ompA family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 308 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 61/180 (33%), Gaps = 7/180 (3%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 ++ + + E+ S I + + LAK + + + V Sbjct: 80 EVSAASSVLESATARSPSLAPISVVPIAQDGMTLAKIDTQLQESMGSLVDAGVVKLTLND 139 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI- 280 + + + + +F S+ VL + +L + +RG+TD N Sbjct: 140 NWLTVEL---SSGLLFGSGSAFMSTNADPVLNTLSSILKQVDNYVRVRGYTDNQQINNEI 196 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 R NW LS RA + L+ G++ R+ + + NR++ + + Sbjct: 197 FRSNWTLSAARAEAVLTALIAKGIAPQRL-AYEAYGEFSPFTDNSTEQGRLQNRKVVVAI 255 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 49/143 (34%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + K+ +L W + YAD+MT++ A F+V++ + + D +A+ Sbjct: 1 MRKRYRLHLQGREHLDRWLVSYADYMTLIFALFVVLYSVALVNKDKYRAVIDGMTQAFNV 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 + S G+ + Q +++ S+ E T S L S Q I Sbjct: 61 MQPRSDGLLEGQGKSLLNNEVSAASSVLESATARSPSLAPISVVPIAQDGMTLAKIDTQL 120 Query: 136 NSQQSEHCKNSLTRDSEKGKDLC 158 + + + L Sbjct: 121 QESMGSLVDAGVVKLTLNDNWLT 143 >gi|305667009|ref|YP_003863296.1| putative flagellar motor protein MotB [Maribacter sp. HTCC2170] gi|88709244|gb|EAR01478.1| putative flagellar motor protein MotB [Maribacter sp. HTCC2170] Length = 283 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 9/172 (5%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 L R + + +L G++ + + + + + +SI D+ Sbjct: 99 ESLQEKDLTIRKLQNAITRRDSVNLSLVQSLKGVLGNLDDEDIEISVEKGVVFVSISDKL 158 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPF-RNIARDNWRLSLD 290 +F S +L K+ +V+ + + + GHTD P+ + + DNW LS Sbjct: 159 ---LFSSGSYNITSRAKEILGKVAKVVNNKPDFEFMVEGHTDDVPYRKGVLLDNWDLSAK 215 Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 RA + ++L GV R++ G A S S NRR I+V + Sbjct: 216 RATAVVRILQNDYGVDPKRMTAA-GRAEFVPV--SQTQKSKNRRTRIVVLPK 264 >gi|256370966|ref|YP_003108790.1| OmpA/MotB domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256007550|gb|ACU53117.1| OmpA/MotB domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 258 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 10/196 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + + S+ P +A++++ L+ Sbjct: 61 QLQSLEHGGRGLLQHSSLVTHPGLTPGPPQITIPQPGAGTPSESQIAQEVNQALAAQGLS 120 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 + V+ + ++S + F S+ P V+ I VL +SI Sbjct: 121 QDAQVVVEQRGVVVRILS-----DKVFFATDSAALGPVGDAVVDAIAGVLRTLPNDVSIE 175 Query: 270 GHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP- 326 G+TD+ P N+ LS RA + + L K G++ DR+S +GF + + Sbjct: 176 GYTDSEPIVGGPYSSNFELSAVRAVTVLERLWKVDGINPDRLSA-TGFGDTHPLVPNTTP 234 Query: 327 -MNSANRRIDILVEDR 341 + NRR+DI++ Sbjct: 235 QNMAMNRRVDIVILSS 250 Score = 44.2 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 41/122 (33%), Gaps = 1/122 (0%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + N W + Y+D +T+L+A F+V++ +++ + + Sbjct: 3 RRHHGEGEAENSERWLLTYSDMITLLLALFVVLFAMSSISVRKFDEFKTGLLQTFSQMQL 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 S + + SS G+ ++ + Q + + SQ Sbjct: 63 QS-LEHGGRGLLQHSSLVTHPGLTPGPPQITIPQPGAGTPSESQIAQEVNQALAAQGLSQ 121 Query: 139 QS 140 + Sbjct: 122 DA 123 >gi|37676652|ref|NP_937048.1| hypothetical protein VVA0992 [Vibrio vulnificus YJ016] gi|37201195|dbj|BAC97018.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus YJ016] Length = 442 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 7/141 (4%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + L + + + + + I+ +F+ S+ + V+ K+ Sbjct: 289 ANQIQRSLATEIEMGLLKVDALPDRVRITFQSND---LFESGSAELVAHIFPVVSKVARA 345 Query: 259 LAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + I + GHTD +P + NW LSL RA + L +G R+ G Sbjct: 346 LEATNGKILVVGHTDNNPIFTSKFPSNWHLSLARATALTDRLASAGKLSGRVIP-EGMGD 404 Query: 318 HRLKIASDPMNSA--NRRIDI 336 R ++++ + NRR++I Sbjct: 405 ARPLVSNETVEGRSINRRVEI 425 >gi|110642959|ref|YP_670689.1| OmpA family membrane protein [Escherichia coli 536] gi|191171277|ref|ZP_03032827.1| OmpA domain protein [Escherichia coli F11] gi|300976455|ref|ZP_07173440.1| OmpA family protein [Escherichia coli MS 200-1] gi|110344551|gb|ABG70788.1| putative OmpA-family membrane protein [Escherichia coli 536] gi|190908577|gb|EDV68166.1| OmpA domain protein [Escherichia coli F11] gi|300308536|gb|EFJ63056.1| OmpA family protein [Escherichia coli MS 200-1] gi|324015357|gb|EGB84576.1| OmpA family protein [Escherichia coli MS 60-1] Length = 550 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 29/269 (10%), Positives = 73/269 (27%), Gaps = 20/269 (7%) Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH------- 142 R+ T D + ++ + L + + Sbjct: 277 TARTGLTTDIADTGTDATLPFPDALLRQLPRQSGFTPLRRACVTMLGITTAAGITMLCLS 336 Query: 143 ----CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + + + + + + + + + + L Sbjct: 337 ATANRQLLRQVGDDLHRFYAVPVEEFITKARHLSVLKDNATMLDGYYREGEPLRLGLGLY 396 Query: 199 ISSTLSGLVADNIVKGVLFETTRTG---ILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + V I E + + + + +FD + + VL Sbjct: 397 PGERIRQPVLRAIRDWRPPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDA 456 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + + + G+TDA+ + N +LSL RA + ++++ + G Sbjct: 457 LVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQG 513 Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDR 341 + +D + NRR++I + R Sbjct: 514 LGESQPAATNDTPQGRAVNRRVEISLVPR 542 >gi|71280429|ref|YP_268267.1| putative chemotaxis MotB protein [Colwellia psychrerythraea 34H] gi|71146169|gb|AAZ26642.1| putative chemotaxis MotB protein [Colwellia psychrerythraea 34H] Length = 329 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 73/206 (35%), Gaps = 8/206 (3%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 E KN D + K+ + L EK L+ ++ Sbjct: 60 QASEEETKNRGHGDGVLMVNTSKTNIKLYGNGILDIAGPELLDNEKNLSNISDAKVGSNL 119 Query: 197 KKISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + L + + + + I + + +F SS +L I Sbjct: 120 SSLEKELHTALYELVESGFAQLQIDGDWLEIELN---SGLLFPSGSSSATLSAEAILTVI 176 Query: 256 GEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 +V+ ++ I +RG+TD N NW LS+ RA + +VL K G++ R+ I G Sbjct: 177 YDVIGQASNFIRVRGYTDNQVINNEIYSSNWELSVFRATAILRVLEKLGLNPARM-AIEG 235 Query: 315 FAHHRLKIASDP--MNSANRRIDILV 338 + + + + NR++ + + Sbjct: 236 YGQYYPSADNLTSEGRAKNRKVVVAI 261 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 93/298 (31%), Gaps = 30/298 (10%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + K++ A++ + W + YAD+MT++ A F+V++ + ++ ++I + F + Sbjct: 4 VRKRRAAVEHDNIH--RWLVSYADYMTLMFALFVVLYAMAMVNEKPFESITESFGRVFQA 61 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 +K ++ I + + + +K + + + Sbjct: 62 SEEETKNRGHGDGVLMVNTSKTNIKLYGNGILDIAGPELL---DNEKNLSNISDAKVGSN 118 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 S + +L E G + I P S L+ + L + Sbjct: 119 LSSLEKELHTALYELVESGFAQLQIDGDWLEIELNSGLLFPSGSSSATLSAE--AILTVI 176 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I + + + S+ + ++ Sbjct: 177 YDVIGQASNFIRVRGYTDNQVINNEIY----------------SSNWELSVFRATAILRV 220 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS--AYQVLMKSGVSEDRISK 311 E L + ++I G+ P + DN S RA + + K G+ + + + Sbjct: 221 LEKLGLNPARMAIEGYGQYYP----SADNLT-SEGRAKNRKVVVAISKYGLEKANLLQ 273 >gi|332664439|ref|YP_004447227.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332333253|gb|AEE50354.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 228 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + +++ K E IL++ + MFD S T L K E + Sbjct: 83 ARKLKEDLGKSAEVERVGESILVTF---DSGIMFDVDSYALKAATRANLDKAAETMKEYD 139 Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I + GHTDA+ N +LS +RA + L ++GV+ R++K GF + Sbjct: 140 KTEIIVMGHTDAT---GSDEYNQKLSENRAAAVSSFLQQNGVTASRLTK-KGFGEQKPVA 195 Query: 323 ASD--PMNSANRRIDILVEDRQ 342 ++ NRR++I + + Sbjct: 196 SNTSVSGREQNRRVEIAIVASK 217 >gi|331658933|ref|ZP_08359875.1| OmpA family of outer membrane porins [Escherichia coli TA206] gi|331053515|gb|EGI25544.1| OmpA family of outer membrane porins [Escherichia coli TA206] Length = 550 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 31/269 (11%), Positives = 72/269 (26%), Gaps = 20/269 (7%) Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 R+ T D + ++ + L + Sbjct: 277 TARTGLTPDIADTGTDDTLPFPDALLRRLPRQSGFTPLRRACVTMLGITTVAGIAALCLS 336 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS--------- 200 + + L + D ++ + L ++ Sbjct: 337 ATANRQLLRQVGDDLHQFYAVPAEEFITKARHLSVLKDDAVMLDGYYREGEPLRLGLGLY 396 Query: 201 --STLSGLVADNIVKGVLFETTRTG---ILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + V I E + + + + +FD + + VL Sbjct: 397 PGERIRQPVLRAIRDWRPPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDA 456 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + + + G+TDA+ + N +LSL RA + ++++ + G Sbjct: 457 LVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQG 513 Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDR 341 + +D + NRR++I + R Sbjct: 514 LGESQPAATNDTPQGRAVNRRVEISLVPR 542 >gi|188532760|ref|YP_001906557.1| hypothetical protein ETA_06130 [Erwinia tasmaniensis Et1/99] gi|188027802|emb|CAO95659.1| OmpA family protein [Erwinia tasmaniensis Et1/99] Length = 413 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 7/141 (4%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V ++++ + +F +S+ VL ++ + + + Sbjct: 264 LKPEIEQGLVAVRDEADRSVVTL---KGDGLFTSASTEVRGRYAEVLDRVAAAMNNVSGR 320 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I + G++D P R+ N+ LSL RA S L + R+ G + Sbjct: 321 ILVVGYSDNVPIRSARFASNYELSLARAQSVSGQLRQHLSQPQRVKA-EGRGESSPLAPN 379 Query: 325 DPM--NSANRRIDILVEDRQG 343 + + NRR++I + G Sbjct: 380 NSAENRARNRRVEITLLVSPG 400 >gi|312959355|ref|ZP_07773872.1| OmpA family protein [Pseudomonas fluorescens WH6] gi|311286072|gb|EFQ64636.1| OmpA family protein [Pseudomonas fluorescens WH6] Length = 261 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 75/238 (31%), Gaps = 11/238 (4%) Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 + + + + N ++ + + D + + + Sbjct: 21 STPPNANLENARTNFSALQANPNATKVAALETKDAQDWLDKADKAYRDKEDQKKVDQLAY 80 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + + + + + K D + + + + T G L++ Sbjct: 81 LTNQRVEVAKDTIALRESEAKLKNAGDERARALLDARDAQIKQLQDSLNAKQTDRGTLVT 140 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 D +F + S +V + K+ + L + + + G+TD++ N Sbjct: 141 FGD----VLFATNKSDLKSTGLVNITKLAQFLRDNPDRKVIVEGYTDST---GSDSYNQS 193 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 LS RA S + L + GV RI G+ + + NRR+++ + + Sbjct: 194 LSERRAASVQRALAQQGVDISRIVT-QGYGKEYPVADNGSVSGRAMNRRVEVTISNDN 250 >gi|218888823|ref|YP_002437687.1| hypothetical protein PLES_00791 [Pseudomonas aeruginosa LESB58] gi|218769046|emb|CAW24806.1| hypothetical protein PLES_00791 [Pseudomonas aeruginosa LESB58] Length = 449 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 7/136 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L D + V E +++I +F +S+ E +L +I + L Sbjct: 312 LADDIKAQRVAVEDAVDRSVVTIRGDE---LFASASASVRDEFQPLLLRIADALRKVKGQ 368 Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA- 323 + + GH+D P NW+LS RA +L + R + G + + Sbjct: 369 VLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTA-EGRSDTEPVASN 427 Query: 324 -SDPMNSANRRIDILV 338 + + NRR++I V Sbjct: 428 ANAEGRARNRRVEITV 443 >gi|146339724|ref|YP_001204772.1| putative Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Bradyrhizobium sp. ORS278] gi|146192530|emb|CAL76535.1| Conserved hypothetical protein; Putative Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Bradyrhizobium sp. ORS278] Length = 707 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 85/288 (29%), Gaps = 18/288 (6%) Query: 55 NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 A + A+ F ++ + + D+ ++ VD Sbjct: 435 AAVREALASALPAPFTLAAVDVRDGPISPYAFGLQKQDGRVRLSGYVPDDAARRDLVDAA 494 Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 + + L+ + S G K + Sbjct: 495 TATFVTETVEDGLKTGAGAPKDFVTSLKATFPALARLWSGTLSAKDAAITIEGQAIYEKS 554 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + KE A +L + + L + I Sbjct: 555 AEQVRKELADAGGGDIKLAGVTIGLKPESPPLAVAECQPAFEGLLAKGRIR--------- 605 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ E++ +L I +V E I+I GHTD DN LS RA Sbjct: 606 --FATGSAELSRESLALLDHIVDVAQRCKEAEITIEGHTDNV---GNEADNIDLSKRRAA 660 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 + + ++G+ R+S G+ +R ++D + NRRI+ +V+ Sbjct: 661 AVVSYISEAGIDTSRMSS-EGYGQNRPVASNDSAEGRAQNRRIEFVVK 707 >gi|238916758|ref|YP_002930275.1| chemotaxis protein MotB [Eubacterium eligens ATCC 27750] gi|238872118|gb|ACR71828.1| chemotaxis protein MotB [Eubacterium eligens ATCC 27750] Length = 266 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 7/166 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + K+ L+ L A + + +++++ + Sbjct: 98 SQDIQNAYDEIEKEGLEQSESMAQEIKDKLTASGVADQIEVTAYSKYVMLNVN---GGIL 154 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 FD + P+ + +L K+ + L VI+I GHTD P +N LSL RAYS Sbjct: 155 FDSGKAELTPQALTLLDKVADALIEYDDNVITIEGHTDNVPINTSRYPNNMMLSLYRAYS 214 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + + D+ SG + + NRR++I V Sbjct: 215 VFDFFVSDKGFSDKTMSSSGRGDAVPIADNGTPEGRAQNRRVEIKV 260 >gi|256830500|ref|YP_003159228.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256579676|gb|ACU90812.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028] Length = 242 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 67/162 (41%), Gaps = 8/162 (4%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + A+ +R++DL G+ + + + GI + + D +F Sbjct: 80 ENPAEALHDPQRIKDLLFPDEVLPEGMARSTLNENLQILVRPEGIALVLSDGM---LFGV 136 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S ++ +L + + LA T +++ G+TD P +DN+ LS +RA S Sbjct: 137 GESALTEDSRKLLSEFAQFLASVTMPVNVAGYTDNIPAG--QKDNYMLSSERAMSVLTFF 194 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 ++ G R +S + + + NRR++IL++ Sbjct: 195 LQQGFDPRRF-SVSAYGEAFPLGDNATPEGRAKNRRVEILLK 235 Score = 41.5 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 30/64 (46%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + + SW + +AD MT+L++FF+++ +++ D + + +F Sbjct: 3 RRKKRAELESPGASWMVTFADLMTLLLSFFVLLLSMSSMDKSILRDVVSHFVGDMGLAPK 62 Query: 79 ASKG 82 G Sbjct: 63 KGAG 66 >gi|301056021|ref|YP_003794232.1| motility protein B [Bacillus anthracis CI] gi|300378190|gb|ADK07094.1| motility protein B [Bacillus cereus biovar anthracis str. CI] Length = 262 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 64 GGTGNKEFLSDQKPNDEKELSASSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 123 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 177 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236 Query: 323 ASDPMN--SANRRIDILVE 339 ++ + NRR+++ + Sbjct: 237 PNNTQEGKAKNRRVEVFIL 255 >gi|124007678|ref|ZP_01692381.1| OmpA family protein [Microscilla marina ATCC 23134] gi|123986800|gb|EAY26572.1| OmpA family protein [Microscilla marina ATCC 23134] Length = 705 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 7/130 (5%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRG 270 + + ++ N F SS ++ V L K+ +++ ++ ++ I Sbjct: 573 GDVIKLTVALEVLKMNAKIVLNHINFASGSSKLDEDSYVELAKVVQLMENNKDIKLEISA 632 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MN 328 HTD + N RLS RA S + L+K+GV + R+ G+ R + + Sbjct: 633 HTDNV---GVYSRNMRLSRQRAQSVFNYLIKTGVDKKRLVS-KGYGSARPLVPNTTKKNK 688 Query: 329 SANRRIDILV 338 + NRR++ V Sbjct: 689 AKNRRVEFKV 698 >gi|49478673|ref|YP_038563.1| flagellar motor protein MotB [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196034432|ref|ZP_03101841.1| chemotaxis protein MotB [Bacillus cereus W] gi|49330229|gb|AAT60875.1| motility protein B [Bacillus thuringiensis serovar konkukian str. 97-27] gi|195992974|gb|EDX56933.1| chemotaxis protein MotB [Bacillus cereus W] Length = 262 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 64 GGTGNKEFLSDQKPNDEKELSASSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 123 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 177 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236 Query: 323 ASDPMN--SANRRIDILVE 339 ++ + NRR+++ + Sbjct: 237 PNNTQEGKAKNRRVEVFIL 255 >gi|30043431|gb|AAP19151.1| putative outer membrane protein [Shigella flexneri 2a str. 2457T] gi|56383924|gb|AAN45037.2| putative outer membrane protein [Shigella flexneri 2a str. 301] gi|332763439|gb|EGJ93678.1| ompA family protein [Shigella flexneri 2930-71] Length = 208 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 69 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSAPLKPAGANTLTGVAM 125 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 126 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 181 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 182 PANPIASNSTAEGKAQNRRVEITL 205 >gi|226946867|ref|YP_002801940.1| OmpA/MotB family protein [Azotobacter vinelandii DJ] gi|226721794|gb|ACO80965.1| OmpA/MotB family protein [Azotobacter vinelandii DJ] Length = 261 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 31/235 (13%), Positives = 77/235 (32%), Gaps = 11/235 (4%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 + + + + L+ + + K + + + + Sbjct: 22 SKPNPNLEQARAAFTALQGNPRAGQLAPLETQDAAKQLKQAEDSYQSGASEERVDQLAYL 81 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + + A + ++ + + + + T G L++ Sbjct: 82 TQRRVEFAEQTILLRNAEREFQQTSSQRAEARLQARDAQIRQLQEELQASHTERGTLVTF 141 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRL 287 D +FD + + P + +QK+ + L + + + G+TD++ N L Sbjct: 142 GD----VLFDYNRAELKPGGMHNVQKLADFLRANPQRQVIVEGYTDST---GSDAYNRDL 194 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 S RA + L+K G+ RI G + ++ + NRR+++ + D Sbjct: 195 SERRAGAVRIALIKMGIDPRRI-ATQGHGKNYPVTSNASPAGRAMNRRVEVTISD 248 >gi|330982864|gb|EGH80967.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 137 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 7/113 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 +FD + + P + K+ L + + + G+TD++ A N LS R Sbjct: 19 GDVLFDYNKAELKPTAQGDIGKLAGFLQENPDRKVIVEGYTDST---GSASYNQSLSERR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 A S L++ GV RI + G+ + + + NRR+++ + + Sbjct: 76 ANSVRMALVRMGVDPARIVTM-GYGKEYPVADNSSNSGRAMNRRVEVTISNDN 127 >gi|327480660|gb|AEA83970.1| outer membrane protein OprF precursor [Pseudomonas stutzeri DSM 4166] Length = 299 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E+ ++ + + + + ++ GHTD+ + N RLS RA + Sbjct: 193 FDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSV---GTDQYNQRLSERRAEAV 249 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 VL+ + GV +R++ + G+ R + NRR++ VE Sbjct: 250 RNVLVNEYGVQGNRVNSV-GYGESRPVADNSTEEGRQINRRVEAEVEA 296 >gi|256419593|ref|YP_003120246.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] gi|256034501|gb|ACU58045.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] Length = 671 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 13/113 (11%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +D + P++++VL + ++ + +I + HTD+ + N +LS RA S Sbjct: 557 YDFDKATLRPQSLIVLDTVVSIMQDNPNIIIEMSAHTDS---KGKDEYNMKLSQKRAQSC 613 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVED 340 L+ G+S +R+ G+ R + NRR + V Sbjct: 614 VDYLISKGISSERMIA-KGYGETRPIAPNTLPNGKDNPEGRQLNRRTEFKVLR 665 >gi|157156833|ref|YP_001464142.1| OmpA domain-containing protein [Escherichia coli E24377A] gi|157078863|gb|ABV18571.1| OmpA domain protein [Escherichia coli E24377A] Length = 550 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + + + V + + + +FD + + VL Sbjct: 399 EQIRQPVLRAIRDYRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 453 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + + G+TDA+ + N +LSL RA + ++++ Sbjct: 454 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + G + +D + NRR++I + R Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542 >gi|306812301|ref|ZP_07446499.1| OmpA family membrane protein [Escherichia coli NC101] gi|305854339|gb|EFM54777.1| OmpA family membrane protein [Escherichia coli NC101] Length = 550 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 31/269 (11%), Positives = 72/269 (26%), Gaps = 20/269 (7%) Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 R+ T D + ++ + L + Sbjct: 277 TARTGLTTDIADTGTDATLPFPDALLRQLPRQSGFTPLRRACVTMLGITTVAGIAALCLS 336 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS--------- 200 + + L + D ++ + L ++ Sbjct: 337 ATANRQLLRQVGDDLHQFYAVPAEEFITKARHLSVLKDDAVMLDGYYREGEPLRLGLGLY 396 Query: 201 --STLSGLVADNIVKGVLFETTRTG---ILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + V I E + + + + +FD + + VL Sbjct: 397 PGEHIRQPVLRAIRDWRPPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDA 456 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + + + G+TDA+ + N +LSL RA + ++++ + G Sbjct: 457 LVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQG 513 Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDR 341 + +D + NRR++I + R Sbjct: 514 LGESQPAATNDTPQGRAVNRRVEISLVPR 542 >gi|220919426|ref|YP_002494730.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219957280|gb|ACL67664.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 206 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 7/118 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286 +++ + +FD SS PE I L+++G+VLA + I I G+TDA+ N Sbjct: 91 LVEMKGDILFDSGSSALKPEAISKLEQMGDVLAKYGDDRIRIEGYTDAT---GSKSMNEE 147 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LSL RA + +VL+ GV E +I+ + G R + + NRR+++ ++ Sbjct: 148 LSLRRADAVKRVLVGRGVQEKQITAL-GMGPVRPVADNGTSAGRAQNRRVELHIDVPN 204 >gi|118479664|ref|YP_896815.1| flagellar motor protein MotB [Bacillus thuringiensis str. Al Hakam] gi|196044798|ref|ZP_03112032.1| chemotaxis protein MotB [Bacillus cereus 03BB108] gi|118418889|gb|ABK87308.1| chemotaxis protein, MotB [Bacillus thuringiensis str. Al Hakam] gi|196024286|gb|EDX62959.1| chemotaxis protein MotB [Bacillus cereus 03BB108] Length = 262 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 64 GGTGNKEFLSDQKPNDEKELSASSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 123 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 124 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 177 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 178 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 236 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 237 PNDTQEGKAKNRRVEVFIL 255 >gi|238023638|ref|YP_002907870.1| hypothetical protein bglu_2g01470 [Burkholderia glumae BGR1] gi|237878303|gb|ACR30635.1| OmpA/MotB [Burkholderia glumae BGR1] Length = 438 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 4/110 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290 R MF S PE VL K+ +A + + G+TD+ P DN LS Sbjct: 328 RGDTMFVTGKSRVRPELEPVLAKVAREVARVGGRVIVTGYTDSQPIHTREFPDNLVLSQK 387 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA VL G +RI I G + + S NRR+++LV Sbjct: 388 RAAFVADVLKAHGTPSERIVSI-GKGDAQPVADNATPQGRSRNRRVEVLV 436 >gi|74314194|ref|YP_312613.1| putative outer membrane lipoprotein [Shigella sonnei Ss046] gi|73857671|gb|AAZ90378.1| putative outer membrane protein [Shigella sonnei Ss046] gi|323166955|gb|EFZ52694.1| inner membrane lipoprotein yiaD [Shigella sonnei 53G] Length = 219 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLTEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|288927544|ref|ZP_06421391.1| lipoprotein PG3 [Prevotella sp. oral taxon 317 str. F0108] gi|288330378|gb|EFC68962.1| lipoprotein PG3 [Prevotella sp. oral taxon 317 str. F0108] Length = 225 Score = 97.7 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 9/150 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K++ + V + V+ V + ++ + +F + + + L K Sbjct: 70 MDKVAKRTAEQVKNAKVEEVTDANGLKAVKVTF---DSGILFATNKATLNQSSKNELAKF 126 Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 +VL + + + I GHTD + N LS RA S L GV + K+ G Sbjct: 127 SQVLKENRDCHVDIYGHTDNT---GNDGINIPLSNSRAQSVVNYLANCGVPRSQFQKVEG 183 Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQ 342 ++ NRR+++ + + Sbjct: 184 KGSSDPVASNSTASGRQQNRRVEVYLYASK 213 >gi|253701505|ref|YP_003022694.1| OmpA/MotB domain protein [Geobacter sp. M21] gi|251776355|gb|ACT18936.1| OmpA/MotB domain protein [Geobacter sp. M21] Length = 466 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +I PE + ++G + ++ GHTD N LS RA + Sbjct: 235 FDIDKAIIRPEYKEEIAQVGNFMKKYPTTTAVIEGHTDNV---GSYNHNQDLSQRRAEAV 291 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339 L++ G+ R+S G+ R + NRRI+ +++ Sbjct: 292 VNHLVEQYGIERSRLSA-KGYGFTRPIADNATDEGKQKNRRIEAIID 337 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 78/260 (30%), Gaps = 12/260 (4%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 P K + L+ K + + ++ + Sbjct: 206 TPAPEPPLEVPAAEPTPDHYKYCITLQGEFDIDKAIIRPEYKEEIAQVGNFMKKYPTTTA 265 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 + + + + S + E + + I + + + I+ + Sbjct: 266 VIEGHTDNVGSYNHNQDLSQRRAEAVVNHLVEQYGIERSRLSAKGYGFTRPIADNATDEG 325 Query: 208 ADNIVKGVLFETTRTGIL-ISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHST 263 + + ++ D+ + FD + + + K+ + + Sbjct: 326 KQKNRRIEAIIDCAFDVQQVTPPDRLCMSLVLDFDPGKAEVKQQYRNEIAKVADYMKRYN 385 Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK 321 ++ GHTD + N +LS RA + L+ + G+ R+S G+ R Sbjct: 386 TTTAVIEGHTDNT---GSPEKNMKLSQQRAQNVVNHLVDNFGIERSRLSA-KGYGATRRI 441 Query: 322 IASDP--MNSANRRIDILVE 339 ++ NRRI+ +++ Sbjct: 442 SYNNTPEGRQKNRRINAVID 461 >gi|119773835|ref|YP_926575.1| outer membrane protein and related peptidoglycan-associated (LipO)protein [Shewanella amazonensis SB2B] gi|119766335|gb|ABL98905.1| outer membrane protein and related peptidoglycan-associated (LipO)protein [Shewanella amazonensis SB2B] Length = 484 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 8/146 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + ++ G+ I + + +FD S LPE+ VL+ + L Sbjct: 342 KIIEATGLNDNRVGIDLNALTDAITQTGKATLDGLLFDYDSDRMLPESKPVLEVLASYLK 401 Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHH 318 + + GHTD N LS RA + + L + ++ G Sbjct: 402 QNPALNFYVVGHTDDQ---GDKAYNLSLSERRAAAVVKALGADYQIKPAQLEA-HGMGEF 457 Query: 319 RLKIASDPMNS--ANRRIDILVEDRQ 342 ++ NRR+++++ Sbjct: 458 SPVASNANEAGQSQNRRVELVLRSDN 483 >gi|95929277|ref|ZP_01312021.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684] gi|95134775|gb|EAT16430.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684] Length = 217 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 10/130 (7%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGH 271 +GV + + ++ FD S + ++ +L + + GH Sbjct: 93 EGVKIDRDGNILYVTFRSDNQ---FDVGSFTLRAGAQQDVARLAAILTEYHKTTILVAGH 149 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329 TD++ N LS RA + +L+ SGV RI+ + GF + Sbjct: 150 TDST---GSEEYNLGLSERRAMAVRNILVASGVISTRITTV-GFGESAPIADNSTEYGRQ 205 Query: 330 ANRRIDILVE 339 NRR+ + + Sbjct: 206 LNRRVALKIT 215 >gi|323697841|ref|ZP_08109753.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132] gi|323457773|gb|EGB13638.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132] Length = 254 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 81/244 (33%), Gaps = 9/244 (3%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 L L L + Q K S KG K Sbjct: 12 PPEDPPGDEGLPPWMATFADMVTLLLCFFVLLLSFAQQSEEKFRDALGSLKGAFGVKEVR 71 Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + N + ++ L + +I S + L + + +G R Sbjct: 72 AVSDEMAQFNTSSEATKEMASSISHDQRLLLSVVMRIKSMVENL-DNKLKEGAGVNADRD 130 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR 282 G++ + +F ++ P+ +L + +VL + +RGHTD P Sbjct: 131 GVVFR---TSSAALFQPFTAELRPDATQILDGVIKVLKDYKLNLVVRGHTDDRPIHTAKY 187 Query: 283 -DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 NW LS RA A ++ K G+ +R + G+A R ++ +D N+R++ + Sbjct: 188 PSNWELSAARAAVALDYIVNKGGIEINRAKAV-GYADTRPEVPNDTEADRLRNQRVEFYI 246 Query: 339 EDRQ 342 Q Sbjct: 247 HMPQ 250 Score = 36.5 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 13/33 (39%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTV 43 + +I +K L W +AD +T+ Sbjct: 3 KVEEVIRRKPPEDPPGDEGLPPWMATFADMVTL 35 >gi|325281257|ref|YP_004253799.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324313066|gb|ADY33619.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712] Length = 276 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 76/184 (41%), Gaps = 12/184 (6%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV---KGVLFE 218 ++ +N + L++ + K + + ++ S L+ + + + Sbjct: 84 SEQEKLNMLLKEKMEKLAEREATINKLQAEVDAQNARLQSLLNSVKDALLGFSSDELTVT 143 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277 I +++ D+ +F+ S+ + L K+ EVL ++ I GHTD P Sbjct: 144 EKNGKIYVAMSDKL---LFESGSAQVNKQGKEALGKLAEVLKKQHDIDVFIEGHTDNKPI 200 Query: 278 RN-IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333 + +DNW LS+ RA S ++L K GV+ +I G ++ + NRR Sbjct: 201 KTVQFKDNWDLSVVRATSVVRILTKDYGVNPLQILPC-GRGEFMPVDNNESVEGRAHNRR 259 Query: 334 IDIL 337 +I+ Sbjct: 260 TEII 263 >gi|330447262|ref|ZP_08310912.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491453|dbj|GAA05409.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 223 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L G+ I++++ N F + + L + Sbjct: 83 YMDVQEAKLRQQLASSGISVTRDGNNIILNM---PNEITFGFDQANLNDRAMNALHNVAL 139 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V +++ G TD+ + A N RLS RA + L++ GV+ +R+ G Sbjct: 140 VAKEYPKTQLNVLGFTDS---KGAASYNLRLSQVRADAVGNYLIRQGVNANRVIS-QGRG 195 Query: 317 HHRLKIASDPM--NSANRRIDILV 338 ++ + NRR++I++ Sbjct: 196 EANPIASNSTENGRAQNRRVEIIL 219 >gi|307825940|ref|ZP_07656155.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] gi|307733059|gb|EFO03921.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] Length = 288 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + F S+ P+ L + +VL + I++ GHTD N LS Sbjct: 107 PSNVTFAFDSATLTPQAQGALDSVAKVLNQYPDSTINVTGHTDDV---GSDSYNQVLSER 163 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342 RA S L + GV+ R+++ G K+ ++ NRR+++ + + Sbjct: 164 RAASVSSYLAQHGVTPSRLTQ-QGMGEKMPKVPNVNEANRGQNRRVELAIVANK 216 >gi|304383212|ref|ZP_07365685.1| OmpA family protein [Prevotella marshii DSM 16973] gi|304335683|gb|EFM01940.1| OmpA family protein [Prevotella marshii DSM 16973] Length = 278 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 83/238 (34%), Gaps = 9/238 (3%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 + + K+ S Q + Q + S + K + + Sbjct: 30 QAENKKLTSEYQSTKEQLAASQARVTSLEDRLAQQKRDYAALQNSLDKSLNNANSNNINI 89 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + + ++ ++ K + L +++ L+ ++ +K V + + + IS+ Sbjct: 90 SKLVDQINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSKEEMKEVDVQVLKGVVYISL 149 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWR 286 D ++ S L KI +++ + I G+TD P R+NW Sbjct: 150 ADNM---LYKSGSYEINDRAAETLSKIAKIITDYKDYDVLIEGNTDNVPISRENIRNNWD 206 Query: 287 LSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS RA S Q L + GV R++ G + + NRR I++ + Sbjct: 207 LSCLRASSVVQYLQTRYGVDPKRMTAG-GRGEYNPLSDNSTALGKQRNRRTQIIITPK 263 >gi|221209294|ref|ZP_03582275.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] gi|221169982|gb|EEE02448.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] Length = 220 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F + P L K+ + +S+ G+TD+ N LS R Sbjct: 114 GDALFASGLATLTPAARASLDKLLNAYGDRSYTQVSVTGYTDSV---GSDASNLALSKRR 170 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 A + L + G++ R ++G + NRR++I ++ Sbjct: 171 AEAVAAYLQQRGLNA-RTLTVTGRGSADPIATNATAEGRATNRRVEISLQR 220 >gi|301047095|ref|ZP_07194195.1| OmpA family protein [Escherichia coli MS 185-1] gi|300300982|gb|EFJ57367.1| OmpA family protein [Escherichia coli MS 185-1] Length = 219 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANPLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALIPQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|283786435|ref|YP_003366300.1| T6SS protein Cts1U [Citrobacter rodentium ICC168] gi|282949889|emb|CBG89514.1| T6SS protein Cts1U [Citrobacter rodentium ICC168] Length = 451 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 4/111 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLD 290 + +F S PE + V+++I + + I GHTDA+P +N LS Sbjct: 341 KGDALFLSGSVRVQPEMVKVIERIASEVQRVNGDVLIVGHTDATPISRPGLPNNVALSEK 400 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 RA Q + +G+ E ++ + G + + NRR++ V Sbjct: 401 RAAEVAQYFIAAGLPESKVK-VRGVGSSQPVANEATAQGRAKNRRVEFFVT 450 >gi|255013439|ref|ZP_05285565.1| OmpA family outer membrane protein [Bacteroides sp. 2_1_7] Length = 213 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + +F +SS + L+ L + + I I G TD + N LS Sbjct: 92 DSGILFATNSSTLSDASKSALRNFATSLKANPDTDIRIIGFTDNT---GKVDYNQTLSEK 148 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA S Y LM GVS DR+ G H ++D NRR++I++ Q Sbjct: 149 RAKSVYDYLMMQGVSTDRMV-YEGKGIHDPVASNDTPEGRSLNRRVEIVILANQ 201 >gi|170697917|ref|ZP_02889001.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|170137192|gb|EDT05436.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] Length = 587 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 8/114 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + +FD + T + E++ + G+ D N +LS+D Sbjct: 466 DSMSLFDSGKARLRTGTTRAMVDALELIKAHPGKRVLVAGYADDQ---GRPDRNLKLSID 522 Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA + L+++ G+ R I G+ R + + NRR++I + Sbjct: 523 RASAVRDWLIEASGIPPTRF-AIQGYGDTRPVADNATPEGRAKNRRVEITLVPD 575 >gi|110677964|ref|YP_680971.1| chemotaxis protein MotB, putative [Roseobacter denitrificans OCh 114] gi|109454080|gb|ABG30285.1| chemotaxis protein MotB, putative [Roseobacter denitrificans OCh 114] Length = 279 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 65/332 (19%), Positives = 125/332 (37%), Gaps = 57/332 (17%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 Q N +IIKKK + ++ G+WK+ YADF+T +MAFF++MW++NAT + + Sbjct: 4 QSNLAPVIIKKKKKVVGGGHHGGAWKVAYADFVTAMMAFFMMMWLLNATTEQQR------ 57 Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 +G+ D P Sbjct: 58 ------------QGLADYFAP-----------------------------------TIPI 70 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 N I + S + G K E+ + + Sbjct: 71 NRISGGGDGAFGGDSIFSEETLPQNGLGATSQHATRKQAASGESGNDDDGGERDTSDEEL 130 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + +++L + V +N ++ ++ T G++I + P+F+ +S +P P Sbjct: 131 QALVEEL---MGRGGESTVMENALEHIVTRITDEGLVIELFALDGLPLFEPNSDVPTPLM 187 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +++ + V +T I+I H + P W S DRA +L ++G+ +R Sbjct: 188 TQLVELVASVAFAATNDIAIGAHVPSRPIVVAQNPVWDASTDRATRTRLMLQENGLEPER 247 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + +++G A + PM + N R++I++ Sbjct: 248 MQRVTGHADREPAHLN-PMATRNSRVEIVLLR 278 >gi|21230892|ref|NP_636809.1| outer membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769109|ref|YP_243871.1| outer membrane protein [Xanthomonas campestris pv. campestris str. 8004] gi|188992257|ref|YP_001904267.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv. campestris str. B100] gi|21112502|gb|AAM40733.1| outer membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574441|gb|AAY49851.1| outer membrane protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734017|emb|CAP52223.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv. campestris] Length = 241 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 12/156 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + L G+ + I +++ D FD S P+ L Sbjct: 85 AAVGQYQDRQERALRERTANTGIDVQRQGDNITLNLPDGIT---FDFGKSALKPQFYTAL 141 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + L + ++ + GHTD+ N RLS +RA + Q L GV +R+ Sbjct: 142 NGVASTLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERANAVAQYLTAQGVQRERMET 198 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV--EDRQG 343 + G + + NRR++I + ++G Sbjct: 199 M-GAGKRYPIADNSTDAGRAQNRRVEIRLIPLRQEG 233 >gi|167561951|ref|ZP_02354867.1| ompA family protein [Burkholderia oklahomensis EO147] gi|167569201|ref|ZP_02362075.1| ompA family protein [Burkholderia oklahomensis C6786] Length = 215 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F P +L + L + ++ S+ G+TD++ A N LS + Sbjct: 103 PSSVTFATDQYAVTPAFTPLLNDLASTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S + + GV+ R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNAMSQRGVAASRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 212 >gi|332666433|ref|YP_004449221.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332335247|gb|AEE52348.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 958 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 6/106 (5%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 +F S LPE L + + + + I I+GHTD + + N LS + Sbjct: 851 SIRDVLFATGSYEILPEAHTYLIQWAKFIQRNKLKIEIQGHTDNT---SSTEFNQVLSEN 907 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 RA + Q L+++ + +S GF + + ++ + NRR+ Sbjct: 908 RAQAVRQFLIENNCIAENLST-RGFGESKPEASNATEEGRAKNRRV 952 >gi|317153907|ref|YP_004121955.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316944158|gb|ADU63209.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 380 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 10/121 (8%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNI 280 + + FD PE+ +L +GE L I + GHTD+ Sbjct: 262 LRPQVNGVNLDIQFDFDKDTIRPESYPLLDALGEALNTQQLKGRSIIVGGHTDSR---GD 318 Query: 281 ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 N LS RA + L+ GV++D I + GF R A + NRR++I Sbjct: 319 DAYNLALSKRRANAVKAYLVNKWGVAQDLIEAV-GFGKTRPIAAGSTTEAMRKNRRVEIR 377 Query: 338 V 338 + Sbjct: 378 L 378 >gi|255531842|ref|YP_003092214.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366] gi|255344826|gb|ACU04152.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366] Length = 445 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD + ++ L K+ +L + + GHTD + N RLS +RA + Sbjct: 345 FDLGKATIRAKSYATLNKVAALLIEKNFSLKLAGHTDNT---GSMALNLRLSKERAEAIK 401 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ G + RI +G+ ++ ++ NRR++ + Sbjct: 402 AYLVSQGANASRIEA-TGYGPNQPIASNKTAEGRQKNRRVEFTL 444 >gi|237728863|ref|ZP_04559344.1| OmpA/MotB domain-containing protein [Citrobacter sp. 30_2] gi|226909485|gb|EEH95403.1| OmpA/MotB domain-containing protein [Citrobacter sp. 30_2] Length = 220 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLREKMQGTGVSVTRSGDNIILNM---PNNVTFDSSSANLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G TD++ N RLS RA S L+ GV+ +RI + G Sbjct: 137 VLKEYNKTAVNVLGFTDST---GSQDLNMRLSQQRADSVASALITQGVAANRI-RTQGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTAEGKAQNRRVEITL 216 >gi|146282405|ref|YP_001172558.1| outer membrane protein OprF precursor [Pseudomonas stutzeri A1501] gi|145570610|gb|ABP79716.1| outer membrane protein OprF precursor [Pseudomonas stutzeri A1501] Length = 315 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E+ ++ + + + + ++ GHTD+ + N RLS RA + Sbjct: 209 FDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSV---GTDQYNQRLSERRAEAV 265 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 VL+ + GV +R++ + G+ R + NRR++ VE Sbjct: 266 RNVLVNEYGVQGNRVNSV-GYGESRPVADNSTEEGRQINRRVEAEVEA 312 >gi|146300670|ref|YP_001195261.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146155088|gb|ABQ05942.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 277 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 10/135 (7%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGH 271 + + + ISI D+ +F S + VL K+ +V+ + + GH Sbjct: 130 PDIEVNVEKGVVFISIADKL---LFKSGSYDVSDKAKSVLAKVAKVVNDKPDFECMVEGH 186 Query: 272 TDASPFRNIAR--DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN 328 TD P+++ DNW LS+ R+ S +VL GV+ ++ G + + +A+D Sbjct: 187 TDDVPYKSNGVILDNWDLSVKRSTSIVRVLTNDLGVNPAKLIAA-GRSSYVPLVANDSAE 245 Query: 329 --SANRRIDILVEDR 341 + NRR I+V + Sbjct: 246 NKARNRRTRIVVMPK 260 >gi|229098968|ref|ZP_04229903.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29] gi|229117997|ref|ZP_04247357.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3] gi|228665446|gb|EEL20928.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3] gi|228684466|gb|EEL38409.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29] Length = 233 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 9/207 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +Q S K+ + N K+ A +++ + +L Sbjct: 24 KQMAVAFRSELAGGTGNKEFLSDQKPNEEKELSANSLESEQIKKNAEAEVKQQEMNELKA 83 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + T G++++I++ +FD + E++ + +++ Sbjct: 84 VQKGIDKYIEEKQLSSSFKTDLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSN 140 Query: 258 VL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ-VLMKSGVSEDRISKISG 314 +L + S I++ GHTD P N NW LS RA + Q +L + + S I G Sbjct: 141 LLVSASPREITVSGHTDTVPIANAQFASNWELSTQRAVNFMQVLLQNKDLQPGKFSAI-G 199 Query: 315 FAHHRLKIASDPMN--SANRRIDILVE 339 + +R +D + NRR+++ + Sbjct: 200 YGEYRSIAQNDTPEGKAKNRRVEVFIL 226 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 1/92 (1%) Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 +T+L A F+V++ +++ D K + F T +K +Q P E + Sbjct: 1 MLTLLFALFIVLFAMSSIDAAKFKQMAVAFR-SELAGGTGNKEFLSDQKPNEEKELSANS 59 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 L ++ ++K N+ K Q+ + Sbjct: 60 LESEQIKKNAEAEVKQQEMNELKAVQKGIDKY 91 >gi|167893289|ref|ZP_02480691.1| ompA family protein [Burkholderia pseudomallei 7894] Length = 171 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F P +L + L + ++ S+ G+TD++ A N LS + Sbjct: 59 PSSVTFATDQYAITPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 115 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + GV+ +R+S G + + NRR++I + Q Sbjct: 116 RAQSVVNALAQRGVAANRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 168 >gi|167844755|ref|ZP_02470263.1| ompA family protein [Burkholderia pseudomallei B7210] Length = 163 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F P +L + L + ++ S+ G+TD++ A N LS + Sbjct: 51 PSSVTFATDQYAITPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 107 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + GV+ +R+S G + + NRR++I + Q Sbjct: 108 RAQSVVNALAQRGVAANRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 160 >gi|59713771|ref|YP_206546.1| OmpA family domain-containing protein [Vibrio fischeri ES114] gi|197337822|ref|YP_002158145.1| OmpA family protein [Vibrio fischeri MJ11] gi|59482019|gb|AAW87658.1| OmpA family domain protein [Vibrio fischeri ES114] gi|197315074|gb|ACH64523.1| OmpA family protein [Vibrio fischeri MJ11] Length = 184 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 13/167 (7%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 S +++ + + + L V ++I T I+I + + Sbjct: 19 QSTSDDEMADIAETPTVASFVDYHNEQLQQFVTEDIG---SVAQTNEEIIILLNGDK--- 72 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD S E+ +VL ++ ++L E + I GHTD+ + N LS RA S Sbjct: 73 SFDSGSIEIKNESKLVLSQLAKLLNDKPESEVFIAGHTDSR---GSKKFNMSLSNQRADS 129 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 +L ++GV +RI+ GF + NRRI+I + Sbjct: 130 VLALLEENGVDGNRINTY-GFGESEPIATNINAEGRKKNRRIEIRIT 175 >gi|254524462|ref|ZP_05136517.1| outer membrane protein [Stenotrophomonas sp. SKA14] gi|219722053|gb|EED40578.1| outer membrane protein [Stenotrophomonas sp. SKA14] Length = 231 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 10/149 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + L G+ + I++++ D FD + P+ L Sbjct: 85 AAVGQYQDRQERALRERTANTGIDVQRQGDNIMLNLPDGIT---FDFGKATLKPQFYGSL 141 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + L + +I + GHTD+ N RLS +RA S Q L+ GV RI Sbjct: 142 NGVAGTLRDYNQTMIEVVGHTDSI---GSDAVNNRLSKERADSVAQYLIGQGVQSVRIET 198 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338 + G + + NRR++I V Sbjct: 199 L-GAGKSYPIADNSTDAGRAKNRRVEIRV 226 >gi|190573806|ref|YP_001971651.1| putative outer membrane lipoprotein [Stenotrophomonas maltophilia K279a] gi|190011728|emb|CAQ45347.1| putative outer membrane lipoprotein [Stenotrophomonas maltophilia K279a] Length = 231 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 10/149 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + L G+ + I++++ D FD S P+ L Sbjct: 85 AAVGQYQDRQERALRERTANTGIDVQRQGDNIMLNLPDGIT---FDFGKSTLKPQFYGAL 141 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + L + +I + GHTD+ N RLS +RA S Q L+ GV RI Sbjct: 142 NGVAGTLRDYNQTMIEVVGHTDSI---GSDAVNNRLSKERADSVAQYLIGQGVQSVRIET 198 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338 + G + + NRR++I V Sbjct: 199 L-GAGKSYPIADNSTDAGRAKNRRVEIRV 226 >gi|119900180|ref|YP_935393.1| hypothetical protein azo3891 [Azoarcus sp. BH72] gi|119672593|emb|CAL96507.1| putative outer membrane protein [Azoarcus sp. BH72] Length = 434 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 11/148 (7%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + ++ L+ + + + V ++ I + +F+ +S+ P + ++ Sbjct: 289 KVPDRLQGFLAPEIREGL---VTVRDLPDRSVVQI---QGDGLFEPASATLAPRVLPLMA 342 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +IGE +A + +RGH+D P R+ NW LS RA S VL + RI Sbjct: 343 RIGEAVARVKGSVLVRGHSDDRPIRSARFPSNWHLSQARADSVAAVLAPQ-LGGARIET- 400 Query: 313 SGFAHHRLKIASDP--MNSANRRIDILV 338 G A ++D + NRR++I+V Sbjct: 401 EGRAESEPVASNDTPEGRARNRRVEIIV 428 >gi|119899491|ref|YP_934704.1| lipoprotein attached to the membrane by a lipid anchor [Azoarcus sp. BH72] gi|119671904|emb|CAL95818.1| lipoprotein attached to the membrane by a lipid anchor [Azoarcus sp. BH72] Length = 193 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 66/178 (37%), Gaps = 15/178 (8%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N+ P + EK A K L K++S L G+ + + Sbjct: 27 DANRPSEGGSTPPAAEKRAASTAKIDWAALQKELSGALRGVQDAEVG---EATADGIHLR 83 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284 I + + F S P P VL + LA V I + GHTD N Sbjct: 84 IPVSNG-----FASGGSEPRPALTKVLDSLVAPLAARPGVGIKVIGHTDGL---GSEMYN 135 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340 +LS+ RA + + L G++ DR+S G + + + NRR++I++ Sbjct: 136 LKLSIQRAEAVMEYLRSRGIAFDRLSA-DGKGETEPIADNAKEATRARNRRVEIVLRA 192 >gi|26249224|ref|NP_755264.1| hypothetical protein c3389 [Escherichia coli CFT073] gi|227888360|ref|ZP_04006165.1| OmpA family membrane protein [Escherichia coli 83972] gi|301049415|ref|ZP_07196377.1| OmpA family protein [Escherichia coli MS 185-1] gi|26109631|gb|AAN81834.1|AE016765_236 Hypothetical protein c3389 [Escherichia coli CFT073] gi|227834629|gb|EEJ45095.1| OmpA family membrane protein [Escherichia coli 83972] gi|300298792|gb|EFJ55177.1| OmpA family protein [Escherichia coli MS 185-1] gi|307554790|gb|ADN47565.1| OmpA family protein [Escherichia coli ABU 83972] Length = 550 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282 + + + + +FD + + VL + + + G+TDA+ + Sbjct: 425 LQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 481 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 N +LSL RA + ++++ + G + +D + NRR++I + Sbjct: 482 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 541 Query: 341 R 341 R Sbjct: 542 R 542 >gi|229186744|ref|ZP_04313902.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1] gi|228596757|gb|EEK54419.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1] Length = 234 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 T + E D + + E S + E + + K L+ L KKI ++ Sbjct: 36 GGTGNKEFLSDQKPNDEKELSASSLETEQAKKQEEAREKEKKEMDELKALQKKIDQYINE 95 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + T G++++I++ +FD + E++ + +++ +L + S Sbjct: 96 ---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGIAKEMSSLLVSASPR 149 Query: 265 VISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI 322 I++ GHTD P N NW LS RA + QVL+++ + ++ S I G+ +R Sbjct: 150 EITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIA 208 Query: 323 ASDPMN--SANRRIDILVE 339 +D + NRR+++ + Sbjct: 209 PNDTQEGKAKNRRVEVFIL 227 >gi|194336698|ref|YP_002018492.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309175|gb|ACF43875.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 229 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 10/138 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 D+ V+G E GI + + +F S+ + ++K+ +L Sbjct: 82 QAAEIDHDVEGARVERVGEGIRVIF---DSGILFSTGSATITSTSRYNIEKLARILNRYN 138 Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 E + GHTD+ N LS RA S +L VS R+S I G+ R Sbjct: 139 ETSLVIEGHTDSI---GSDDANQSLSERRADSVANLLEAYRVSGRRLSPI-GYGETRPVS 194 Query: 323 ASDPMNSA--NRRIDILV 338 +++ NRR+++L+ Sbjct: 195 SNETEYGRKLNRRVEVLI 212 >gi|315298823|gb|EFU58077.1| OmpA family protein [Escherichia coli MS 16-3] Length = 550 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282 + + + + +FD + + VL + + + G+TDA+ + Sbjct: 425 LQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 481 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 N +LSL RA + ++++ + G + +D + NRR++I + Sbjct: 482 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 541 Query: 341 R 341 R Sbjct: 542 R 542 >gi|300980597|ref|ZP_07175094.1| OmpA family protein [Escherichia coli MS 45-1] gi|300409214|gb|EFJ92752.1| OmpA family protein [Escherichia coli MS 45-1] gi|315293784|gb|EFU53136.1| OmpA family protein [Escherichia coli MS 153-1] Length = 550 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282 + + + + +FD + + VL + + + G+TDA+ + Sbjct: 425 LQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 481 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 N +LSL RA + ++++ + G + +D + NRR++I + Sbjct: 482 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 541 Query: 341 R 341 R Sbjct: 542 R 542 >gi|296271644|ref|YP_003654275.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296095819|gb|ADG91769.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299] Length = 271 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 98/244 (40%), Gaps = 10/244 (4%) Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 + + + + +++ + + + E K + Sbjct: 32 GTTTFYTPSISQKIIIPEKTVPIQEEIVEGPSEKVVPPIIEDQKDDAVIDENTDEDQKKI 91 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 + + K + + K++++L+ KI + D+ ++ + Sbjct: 92 DDIEKPDIENADIIVDDKKEVDNTKKVVIPEDKKIEELSHKIQ---PKNIQDDTIESKMD 148 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 + +T I+ + ++ F + + E+ V+++I ++L ++ I I GHTDA Sbjct: 149 KNKKTQDEINAVISKDHIFFKRLGTDITDESYKVVEQIAKILKNNPSVKIEIGGHTDA-- 206 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 + A N +SL RA S + L K G++EDRI+ + G+ + + +D +S NRR+ Sbjct: 207 -KGEADVNQWISLQRAKSVKKELEKLGIAEDRITAV-GYGESQPLVPNDKNGYSSENRRV 264 Query: 335 DILV 338 + + Sbjct: 265 EFKI 268 >gi|289670151|ref|ZP_06491226.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 241 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 10/149 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + L G+ + I +++ D FD S PE L Sbjct: 85 AAIGQYQDRQERALRERTANTGIEVQRQGDNISLNLPDGIT---FDFGKSALKPEFYTAL 141 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + L + ++ + GHTD+ N RLS +RA + Q L GV +R+ Sbjct: 142 NGVASTLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERAGAVAQYLTAQGVQRERMET 198 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338 + G ++ + NRR++I + Sbjct: 199 M-GAGKRYPIADNNTDAGRAKNRRVEIRL 226 >gi|289662480|ref|ZP_06484061.1| hypothetical protein XcampvN_05177 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289669716|ref|ZP_06490791.1| hypothetical protein XcampmN_14767 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 224 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 64/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS +K+++ + + L+ +A R ++ I R + Sbjct: 43 QLSSRLDAEVKQRQAEAQRRQTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S PE VL+ + + L E++ + G TD P DNW LS Sbjct: 93 FAFNSDELQPEGREVLKSLAAPLAQYLRAREEILMVSGFTDDRPVLGGNRRYADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 RA + + L+ GV + + F + ++ + NRR++I Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADEARRAKNRRVEI 200 >gi|229593379|ref|YP_002875498.1| hypothetical protein PFLU6014 [Pseudomonas fluorescens SBW25] gi|229365245|emb|CAY53556.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 429 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 LV D V E +++I +F +SS + + ++ +I + + Sbjct: 292 LVEDIKAGRVAVEDAVDRSVVTIRGDE---LFASASSSIVDDYQPLMLRIADAIRKVKGQ 348 Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + + GH+D P NW LS RA S +L DR S G + + Sbjct: 349 VRVTGHSDNRPIATLRFPSNWALSEARAKSVLDILAAKTGQADRFSA-EGRSDTEPVATN 407 Query: 325 DPM--NSANRRIDILVED 340 + NRR++I V Sbjct: 408 ATAEGRARNRRVEITVLA 425 >gi|222034509|emb|CAP77251.1| hypothetical protein LF82_430 [Escherichia coli LF82] gi|312947346|gb|ADR28173.1| hypothetical protein NRG857_13805 [Escherichia coli O83:H1 str. NRG 857C] Length = 550 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282 + + + + +FD + + VL + + + G+TDA+ + Sbjct: 425 LQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 481 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 N +LSL RA + ++++ + G + +D + NRR++I + Sbjct: 482 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 541 Query: 341 R 341 R Sbjct: 542 R 542 >gi|149278789|ref|ZP_01884924.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Pedobacter sp. BAL39] gi|149230408|gb|EDM35792.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Pedobacter sp. BAL39] Length = 175 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 8/162 (4%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 A K +K + + + DN+ K + + +F +SSI Sbjct: 18 ACKTQKIAKSTTPPATEVAADQELDNLKKNLPDNQIARTNEGIKFTFSSEVLFPTNSSIL 77 Query: 245 LPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + L ++ +V++ + I GH+D + A N LS RA S L+ Sbjct: 78 NEASKKKLAEVAKVISEQKPAPAVLIEGHSDKT---GTAPYNQWLSEKRAVSVKTYLVSL 134 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 G++ +I + +G + + NRR++I + Sbjct: 135 GIAASKI-RTAGQGDTKPVGDNKTKEGRLQNRRVEITLLKSN 175 >gi|119384145|ref|YP_915201.1| hypothetical protein Pden_1404 [Paracoccus denitrificans PD1222] gi|119373912|gb|ABL69505.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222] Length = 463 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 89/249 (35%), Gaps = 16/249 (6%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + + + + + + ++ N NSQ E+ + ++ DL + Sbjct: 218 LARQQLSEQEALSVEDRRRLAALNQQVAQLNSQLGSLRAVLDAAGEERREADLRAEDLGR 277 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 +N K + L + + + + AK ++ S +L ++ Sbjct: 278 QLNVALLRAAEEERKRRALEEEARSKAEAEAKDLARYRSEFFGRLSQ--ILAGREGVRVV 335 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPF 277 + +F + PE + ++ ++L +I + GHTD P Sbjct: 336 GDRFVFSSEVLFAPGEATLSPEGRTQVARVADMLKQISGDIPPEIDWMIRVDGHTDNLPL 395 Query: 278 RN--IARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASD--PMNSANR 332 RDNW LS RA + + ++ G R+ +GFA R D + NR Sbjct: 396 SGQGRYRDNWELSQARALAVVRYMVDDLGFPATRL-APAGFADTRPVAQGDAPEARAQNR 454 Query: 333 RIDILVEDR 341 RI++ + +R Sbjct: 455 RIELKLTER 463 >gi|296536082|ref|ZP_06898216.1| OmpA family protein [Roseomonas cervicalis ATCC 49957] gi|296263579|gb|EFH10070.1| OmpA family protein [Roseomonas cervicalis ATCC 49957] Length = 235 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 73/224 (32%), Gaps = 15/224 (6%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + +++ + + + + + I ++ + +R Sbjct: 13 AEAEGGEHARLAESARAQVALLTQQVTQLRAELSRIAALLEAEEQSGRDKEAQISQLGQR 72 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETI 249 L L +D + R + I + +F + Sbjct: 73 LNAALAARVEELQRYRSDFFGRLRDVLGDRPEVRIVGDRFVFQGEVLFPVGGAELSAAGQ 132 Query: 250 VVLQKIGEVL--------AHSTEVISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVL 299 L+ + +VL ++ + GH D SP NW LS RA + Q L Sbjct: 133 QQLRALAQVLLEVTRRFPQDLAWILRVDGHADRSPLRAGARYASNWELSAARAIAVGQFL 192 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 + G+ +R+ + F ++ + D + NRRI++ + DR Sbjct: 193 IGEGLPPNRV-AATAFGEYQPIDSGDSPEAFARNRRIELRLTDR 235 >gi|269792934|ref|YP_003317838.1| OmpA/MotB domain-containing protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100569|gb|ACZ19556.1| OmpA/MotB domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 241 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 9/180 (5%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTG 223 + K A KR Q+ + I+ L L + + + + G Sbjct: 61 PGGKTIQEDAGVYQGKVGQDAGDSIKRTQEFKEGIARQLQALAKEEGLQSQMKVHVDQRG 120 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR- 282 + +S+ +Q +F S+ P VL K+G+VL +S GHTD +P Sbjct: 121 VTVSMSEQ---FLFAPGSAELSPFARRVLFKVGQVLRVVRFPLSFEGHTDNTPMEGGLYG 177 Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 DNW LS RA + ++ G+S+ + + G+ + + +D + NRR+DI++ Sbjct: 178 DNWGLSAARAAAVASYMVNRIGLSDKNVQAV-GYGPSKPLVPNDTPEHRAINRRVDIVIL 236 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 43/141 (30%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K + P + Y D +T+L+ FF+ ++ ++ D + + F L Sbjct: 3 RKKKQPEGPTGAPLFMATYGDMVTLLLTFFVFLYSFSSIDVQKFQKMIFSFQGALGVLPG 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 D + Q+ D K + ++ + +++ Q Sbjct: 63 GKTIQEDAGVYQGKVGQDAGDSIKRTQEFKEGIARQLQALAKEEGLQSQMKVHVDQRGVT 122 Query: 139 QSEHCKNSLTRDSEKGKDLCK 159 S + S + + Sbjct: 123 VSMSEQFLFAPGSAELSPFAR 143 >gi|163782256|ref|ZP_02177254.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Hydrogenivirga sp. 128-5-R1-1] gi|159882289|gb|EDP75795.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Hydrogenivirga sp. 128-5-R1-1] Length = 313 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S++ P + L++I L + + + + GHTD + N +LSL RA + Sbjct: 211 FDHGSAVIKPGSEKTLKEIARYLKMNPKARLYVVGHTDGT---GSYDYNLKLSLKRAEAV 267 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 + L+K G+S R+ + G + + NRR++++ Sbjct: 268 VRRLVKEYGISPKRLKAV-GVGPVAPVDTNRTPEGRARNRRVELV 311 >gi|108759418|ref|YP_635012.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622] gi|108463298|gb|ABF88483.1| OmpA domain protein [Myxococcus xanthus DK 1622] Length = 543 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F I L E+ +L+++ V+ +T + + + GHTD+ N LS RA S Sbjct: 399 FATDQDIILSESFPILEEVARVMNENTEADRVHVEGHTDSR---ASDAYNLDLSRRRAAS 455 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 + L++SGV+ +R+ GF R + + NRR+D ++ Sbjct: 456 VMRFLVESGVAAERLCS-QGFGRSRPLADNATEEGMALNRRVDFTIQPP 503 >gi|94309565|ref|YP_582775.1| OmpA/MotB [Cupriavidus metallidurans CH34] gi|93353417|gb|ABF07506.1| putative OmpA/MotB (family of outer membrane porins precursor) [Cupriavidus metallidurans CH34] Length = 572 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 6/113 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + +F S++ + VL E++ + + GHTD+ +R N +LS Sbjct: 443 DSLSLFKSGSALLNLGSNRVLIGALEMIKAHPDKRVLVAGHTDSV---GDSRANLKLSEA 499 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 RA S L + I G+ R K ++P +ANRR++I + Sbjct: 500 RAASVRDWLADAADLPVTRFAIQGYGETRPKAPNEPEAGRAANRRVEITLVPD 552 >gi|78224724|ref|YP_386471.1| OmpA/MotB [Geobacter metallireducens GS-15] gi|78195979|gb|ABB33746.1| OmpA/MotB [Geobacter metallireducens GS-15] Length = 193 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 ++ P + + A + + A + L ++ Sbjct: 22 AKKEMVKPEEAVPPVAAPQPTTPAKPAAPPVKEEPIAAQPIPEAPVKTETLQPATALDTV 81 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWR 286 + FD S + +L K E L + I GH D N Sbjct: 82 TATLDRIFFDFDSFVLSQAARDILSKNAEYLLKKQPNARVLIEGHCDER---GSDEYNLA 138 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L RA +A L+ GV+ +R+S IS + + + NRR + L+ Sbjct: 139 LGEKRAKAARDYLVTLGVAANRLSIIS-YGEEKPLDPGHTEEAWAKNRRAEFLI 191 >gi|325923199|ref|ZP_08184883.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas gardneri ATCC 19865] gi|325546323|gb|EGD17493.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas gardneri ATCC 19865] Length = 249 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 12/156 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + L G+ + I +++ D FD S P+ L Sbjct: 93 AAVGQYQDRQERALRERTANTGIEVQRQGDNITLNLPDGIT---FDFGKSALKPQFYSAL 149 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + L + ++ + GHTD+ N RLS +RA + Q L GV +R+ Sbjct: 150 NGVASTLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERAGAVAQYLTAQGVQRERMET 206 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV--EDRQG 343 + G ++ + NRR++I + +G Sbjct: 207 M-GAGKRYPIADNNTDAGRAQNRRVEIRLIPLRSEG 241 >gi|302343737|ref|YP_003808266.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075] gi|301640350|gb|ADK85672.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075] Length = 245 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 14/169 (8%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVAD-----NIVKGVLFETTRTGILISIIDQRNTPM 236 + L L ++++ + ++ +G+ G +I++ N + Sbjct: 77 EQLETATPADLDLAKQELAEMMELPSGQTDLAGSLQQGLQVRQEPRGTVITL---ANDLL 133 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS--PFRNIARDNWRLSLDRAYS 294 F + P+ + ++KI VLAH + IS+ GHTDAS + DNW LSL RA++ Sbjct: 134 FAPGKAELSPQAVESIKKIASVLAHGSANISVEGHTDASAPGAGSGFGDNWSLSLARAHA 193 Query: 295 AYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 L+ G+ DR+ +++ R + +D + NRR +I+V Sbjct: 194 VLLRLIDPGGLKPDRL-RLAALGDSRPLVPNDTPQRRAMNRRTEIVVLA 241 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 7/113 (6%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 KKK + P W ++D +T+L+ FF+++ + + KA F+ G + Sbjct: 4 KKKQEVGFDPLG---WMFTFSDLVTLLLTFFVMLLAMKQPEVLKFKAAFGVFSGGGGAGV 60 Query: 78 TASKGIFDEQN----PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 A Q + + DL + + ++L G T+ Q+ Sbjct: 61 MALTDQPGVQAHRRIMEQLETATPADLDLAKQELAEMMELPSGQTDLAGSLQQ 113 >gi|86130189|ref|ZP_01048789.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85818864|gb|EAQ40023.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 236 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 73/207 (35%), Gaps = 17/207 (8%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + K ++ + + S E + + ++ A++ Sbjct: 30 ANNKQKGAVIGATGGAILGAIIGNNAGSGGNGELGAVIGGVVGGGAGVLIGNKMDKQAQQ 89 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I + G + + G++ D+ + FD + + +L K+ + Sbjct: 90 IEQEIPGASVERVDDGIVVT----------FDENSGVYFDTAKYNINANSQTMLNKLSNI 139 Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + + + + GHTD+ N LS +RA + ++ +G+S R + + + Sbjct: 140 MKEYNQTNVIVAGHTDSV---GSDASNLTLSQNRANAVTNYMIGTGLSAGRFTTV-WYGE 195 Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342 + ++D + NRR+ + + + Sbjct: 196 AQPAASNDTAEGRAQNRRVQLAIVPNE 222 >gi|85706177|ref|ZP_01037272.1| OmpA domain protein [Roseovarius sp. 217] gi|85669341|gb|EAQ24207.1| OmpA domain protein [Roseovarius sp. 217] Length = 219 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 61/205 (29%), Gaps = 10/205 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + +T ++ K + K ++ Sbjct: 19 AAACTEPGYVTGNNTNQKTKQGAILGGIIGAGTGAIVSDDKGKGALIGGILGAAGGATIG 78 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + V T +++++ +F S L K+ + Sbjct: 79 NALDRQEAELRQQLDNDVQIVNTGDRLILTMPQD---ILFPVDSFTVASVLRDDLLKVAQ 135 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + + GHTD+ A N LS RA + VL GVS R+ G Sbjct: 136 SLQAYPDTTVQVVGHTDSD---GAASYNQSLSERRANAVADVLASGGVSYGRLRAF-GRG 191 Query: 317 HHRLKIASDP--MNSANRRIDILVE 339 + ++ + NRR++I++ Sbjct: 192 EDQPVASNLTPQGKAQNRRVEIVIL 216 >gi|119357024|ref|YP_911668.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354373|gb|ABL65244.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266] Length = 369 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FDKSSSIPLPETIVVLQK 254 I S ++G +K V + S++ + FD ++ PE+ V+ + Sbjct: 226 IGSHITGTKNKGYIKNVRIAAGSVKLYNSLMAKGRIATTGIKFDTGNATLKPESNGVINE 285 Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 I +++ + I GHTD+ N LS R+ + L+K G++ R+ IS Sbjct: 286 IVKMMNTYPVIRLRIEGHTDSD---GDTSANQILSEKRSAAVKAALIKRGIAAVRL-SIS 341 Query: 314 GFAHHRLKIASDPMNSA--NRRIDIL 337 F + + NRR++ + Sbjct: 342 SFGETKPVADNTTSEGKANNRRVEFV 367 >gi|78356582|ref|YP_388031.1| motB protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218987|gb|ABB38336.1| motB protein, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 245 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 8/172 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + +++ +K+L + +K+ S + + V+GV+ G++ I + Sbjct: 76 SDDAALLESVRLQKQLIEAQRKVYSDVRTFLNRKGVEGVIGAVFDEGVI--TIKVPAGVL 133 Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDAS--PFRNIARDNWRLSLDRAY 293 F+K+S + + +L+ + + L + I+IRG+TD S + RDNW +S RA Sbjct: 134 FEKNSVDISADGLSMLEGLNDFFLKKKDQSINIRGYTDDSVPAAGSRFRDNWEISALRAV 193 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 + + +KSG+ R++ +G + + NRR++ ++E R G Sbjct: 194 NVLRFFLKSGIEPGRLTA-TGLGDLDPLFPNTSEENRAKNRRVEFVLERRVG 244 >gi|317046265|ref|YP_004113913.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b] gi|316947882|gb|ADU67357.1| OmpA/MotB domain protein [Pantoea sp. At-9b] Length = 220 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SSS P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDSSSSNLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV +R+ + G Sbjct: 137 VLKEYPKTAVNVTGYTDST---GTRALNMRLSQQRAESVASALIVQGVEANRL-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILVE 339 ++ + NRR++I + Sbjct: 193 PDNPVASNSTEAGKAQNRRVEITLT 217 >gi|149925042|ref|ZP_01913359.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica SIR-1] gi|149814084|gb|EDM73711.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica SIR-1] Length = 233 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSL 289 +F+ + E+ ++ +I +V + +S+ GHTD+ +R N +LS Sbjct: 69 NEKILFEVDKAEIRSESFSLMDEITKVFIDNPRIKKVSVEGHTDSD---GSSRYNKKLSQ 125 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340 RA S L++ GV+++R+ + G + +D NRR++ ++ + Sbjct: 126 KRADSVMAYLVEHGVAQERLEAV-GHGEEKPIADNDTDEGKEKNRRVEFIILE 177 >gi|293603504|ref|ZP_06685926.1| OmpA family protein [Achromobacter piechaudii ATCC 43553] gi|292818090|gb|EFF77149.1| OmpA family protein [Achromobacter piechaudii ATCC 43553] Length = 210 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 10/126 (7%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + E + ++I + FD + P + VL + L E + GHTD+ Sbjct: 87 VVEMPDGSLKVNI---PSGVSFDTDKTQLKPALLPVLDSVARSLNQHPELRAKVVGHTDS 143 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 + N LS++RA S L K GV+ R+ I G + NR Sbjct: 144 T---GALAHNQTLSVNRARSVTDYLAKQGVAATRL-AIEGRGPSDPIGDNATAEGRALNR 199 Query: 333 RIDILV 338 R++I + Sbjct: 200 RVEIYL 205 >gi|83814826|ref|YP_444492.1| OmpA family protein [Salinibacter ruber DSM 13855] gi|83756220|gb|ABC44333.1| OmpA family protein [Salinibacter ruber DSM 13855] Length = 230 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 10/142 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 D + E GI ++ + +FD SS E L + E + Sbjct: 80 KAEELDEELDNADVERVGEGIKVTF---DSGILFDFDSSTLRAEARQNLTEFAESMQGFE 136 Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GHTDA N +LS RA SA + L+ GV R++ + G Sbjct: 137 DTKILVVGHTDAQ---GSEEYNQKLSDRRAESATRHLVDRGVDPSRLTSV-GRGETEPVA 192 Query: 323 ASDPMNSA--NRRIDILVEDRQ 342 +++ NRR+++ + + Sbjct: 193 SNETEEGRQQNRRVEVAIYANE 214 >gi|83941363|ref|ZP_00953825.1| flagellar motor protein [Sulfitobacter sp. EE-36] gi|83847183|gb|EAP85058.1| flagellar motor protein [Sulfitobacter sp. EE-36] Length = 582 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 82/250 (32%), Gaps = 16/250 (6%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 ++ + + +T ++ L N Q E + + L Sbjct: 336 DAARSELAQEEAATAAAQRQTELLNQQVAALRGQLGELQSLLDDAVARDAAKEVQLQSLG 395 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 +N + L + RL+ K + S + +L I Sbjct: 396 SDLNTALARVAAEERRRAKLEAAERARLEAETKNLEQYRSEFFGRL--RALLGNQEGVRI 453 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASP 276 + +F ++ + + K+ +L VI + GHTD P Sbjct: 454 EGDRFVFSSEVLFPPGAATLSADGRGEIAKVAGILRNIAADIPPEIDWVIRVDGHTDNQP 513 Query: 277 FRN--IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSAN 331 DNW LS RA S + ++ G++ +R+ +GF ++ + + N Sbjct: 514 LSGLGEFADNWELSQARALSVVKYMINFLGIAPERL-AANGFGQYQPVARGNTEAARAQN 572 Query: 332 RRIDILVEDR 341 RRI++ + +R Sbjct: 573 RRIELKLTER 582 >gi|57169060|ref|ZP_00368187.1| fibronectin-binding protein [Campylobacter coli RM2228] gi|57019518|gb|EAL56209.1| fibronectin-binding protein [Campylobacter coli RM2228] Length = 332 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD P +++I ++L + +I GHTD N +LS RA S Sbjct: 229 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 285 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 + L K GV + RI + G+ + + +++ NRR+D Sbjct: 286 AKELEKFGVDKSRIQTV-GYGQDKPRSSNETKEGRADNRRVD 326 >gi|170722410|ref|YP_001750098.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619] gi|169760413|gb|ACA73729.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 383 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 7/111 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S P + +L + + + GH DA A N LS RA + Sbjct: 263 LFDPGSDELKPGSTKLLVNALVGIKAQPGWLIVISGHADAR---GDAAKNLDLSRARASA 319 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 + + G D + G A + ++D + NRR+DI + QG Sbjct: 320 VRDWMQRMGDIPDSCFAVQGVAASQPVSSNDTVNGRAENRRVDIRLV-PQG 369 >gi|83720098|ref|YP_441413.1| ompA family protein [Burkholderia thailandensis E264] gi|83653923|gb|ABC37986.1| ompA family protein [Burkholderia thailandensis E264] Length = 261 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F P +L + L + ++ S+ G+TD++ A N LS + Sbjct: 149 PSSVTFATDQYAVTPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 205 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + GV+ R+S G + + NRR++I + Q Sbjct: 206 RAQSVVNALAQRGVAATRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 258 >gi|538830|pir||F40590 motB homolog lafU - Vibrio parahaemolyticus (fragment) Length = 202 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 78/255 (30%), Gaps = 58/255 (22%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ A + G+WK+ +ADFM LMA FLV+W++ D + +KAI + + Sbjct: 3 KQEHVVFKRAKAHGHDEPHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + Q S + IDL+ D + + S+ + E N Sbjct: 63 SSSVFDKSYGNPFDTSQ------SISPIDLAQDSSVPSKHNSNHVVSSYFQGDGDGPEIN 116 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 E Sbjct: 117 SLVPGTFDTQE------------------------------------------------- 127 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L LAK I + + N V T G+ I + D MF + + P Sbjct: 128 QLAALAKVIEEMTAQI---NAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFED 184 Query: 251 VLQKIGEVLAHSTEV 265 +L + + T Sbjct: 185 LLLALAPLFEQVTNP 199 >gi|264680876|ref|YP_003280786.1| OmpA/MotB [Comamonas testosteroni CNB-2] gi|299531878|ref|ZP_07045278.1| OmpA/MotB [Comamonas testosteroni S44] gi|262211392|gb|ACY35490.1| OmpA/MotB [Comamonas testosteroni CNB-2] gi|298720053|gb|EFI61010.1| OmpA/MotB [Comamonas testosteroni S44] Length = 219 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D + FD + +L + E L ++ + I GHTD++ N LS Sbjct: 106 DIPSDISFDTGRADIKGNFAPILDRFAEGLRNNPNAEVRIIGHTDST---GSDAINNPLS 162 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 L RA S L GV+ RI ++ G H+ ++ + NRR++I V +R Sbjct: 163 LQRAESTRNYLTSRGVNGARI-QVQGMGSHQPVASNATNEGRARNRRVEIFVGER 216 >gi|134296618|ref|YP_001120353.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4] gi|134139775|gb|ABO55518.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4] Length = 213 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F + P +L + L + +V SI G+TD++ A+ N LS + Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQVTASIVGYTDST---GSAQLNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L++ GV+ R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNALVQRGVAGGRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAAQ 212 >gi|146308664|ref|YP_001189129.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp] gi|145576865|gb|ABP86397.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 218 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290 F +S+ L + V + ++I GHTD++ N LS Sbjct: 110 PGNITFASNSADISSSFYPTLNSLVLVFKEFNKNGVNIVGHTDST---GSQELNQSLSSR 166 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 RA S L +GV RIS G + ++ + NRR++I + Sbjct: 167 RAQSVANYLTANGVPGQRISAY-GAGPSQPIASNATDAGRAQNRRVEINLR 216 >gi|308188742|ref|YP_003932873.1| OOP family outer membrane lipoprotein yiaD precursor [Pantoea vagans C9-1] gi|308059252|gb|ADO11424.1| Putative OOP family outer membrane lipoprotein yiaD precursor [Pantoea vagans C9-1] Length = 220 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SSS P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRNGDNIVLNM---PNNVTFDSSSSNLKPAGANTLTGVSM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV+ DR+ + G Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSRALNMRLSQQRAESVASALIVQGVASDRL-RTQGAG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 + + NRR++I + Sbjct: 193 PDNPVATNSTEAGKAQNRRVEITL 216 >gi|114769425|ref|ZP_01447051.1| flagellar motor protein [alpha proteobacterium HTCC2255] gi|114550342|gb|EAU53223.1| flagellar motor protein [alpha proteobacterium HTCC2255] Length = 638 Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 21/221 (9%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK--- 197 + K + ++ + K L + +L + E L ++ ++ + K Sbjct: 419 DESKEADSKAQIQLKMLGTNLNLALARVASEQRKLAAEQEKVAAEQRKIAEFESKEKLRL 478 Query: 198 -KISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + L ++ K + G+ I + +F S+ + K Sbjct: 479 ADEAKDLKKFRSEFFGKLREVMEGKEGVRIVGDRFVFSSEVLFSVGSAYLGSRGKTEISK 538 Query: 255 IGEVLAHS--------TEVISIRGHTDASPFRN---IARDNWRLSLDRAYSAYQVLM-KS 302 + +++ ++ + GHTD PF +DNW LS RA S + LM Sbjct: 539 VADIINQIADEIPTGIDWILRVDGHTDRIPFSGFGNDYKDNWELSQARALSVVRYLMDDL 598 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 + +R+ +GF + D + NRRI++ ++ Sbjct: 599 DIPANRL-AANGFGEFQPIDNRDTPEAYKTNRRIELKFTEK 638 >gi|237654130|ref|YP_002890444.1| OmpA/MotB domain protein [Thauera sp. MZ1T] gi|237625377|gb|ACR02067.1| OmpA/MotB domain protein [Thauera sp. MZ1T] Length = 222 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288 D FD P VL ++ L ++I GHTD++ N LS Sbjct: 109 DIPADVSFDVGRHAIKPNMRPVLDRLASTLNQHPVTTVTIIGHTDST---GSDAVNDPLS 165 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 ++RA + L++ GVS RI + G + + + NRR++I + Sbjct: 166 INRAAATRDYLVQRGVSAQRI-AVDGRGSRQPVADNSTASGRAMNRRVEIFI 216 >gi|254482517|ref|ZP_05095756.1| peptidoglycan-associated lipoprotein, putative [marine gamma proteobacterium HTCC2148] gi|214037208|gb|EEB77876.1| peptidoglycan-associated lipoprotein, putative [marine gamma proteobacterium HTCC2148] Length = 174 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 6/115 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD 283 + + N FD S P+ + L + + + + GHTD Sbjct: 63 LRDAAAAYGNVFYFDYDSYNLNPDAVSALDAHISAMQGNEANVRLEGHTDER---GTREY 119 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 N L RA + ++ +GVS RI +S + R + + + NRR+++ Sbjct: 120 NMALGERRANAVRDYMVVNGVSSYRIETVS-YGEERPIAYGSGESNWAQNRRVEL 173 >gi|238750197|ref|ZP_04611700.1| Type VI secretion system OmpA/MotB family protein [Yersinia rohdei ATCC 43380] gi|238711741|gb|EEQ03956.1| Type VI secretion system OmpA/MotB family protein [Yersinia rohdei ATCC 43380] Length = 457 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 12/160 (7%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP--------MFDKSS 241 KR+ L + + + +V + VL + L+S+ + + MF S Sbjct: 297 KRMTVLQRPVIAQRPAVVEQKLRLAVLLKDEIAKQLVSVDETTSQSKVIFKGDTMFQVGS 356 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLM 300 PE I V+ ++ + + + I GHTD+ P + +N LS RA + ++ Sbjct: 357 DKVRPEIINVIDRVAQEVHRVQGAVLIVGHTDSMPINKPGFPNNQVLSEKRAANVAHLME 416 Query: 301 KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 K+G+ D+I + G + ++ + NRR++I V Sbjct: 417 KAGIPTDKI-RFEGKGDIQPVGSNGDAAGRAQNRRVEIFV 455 >gi|58581150|ref|YP_200166.1| OmpA family protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623073|ref|YP_450445.1| OmpA family protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58425744|gb|AAW74781.1| OmpA family protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367013|dbj|BAE68171.1| OmpA family protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 241 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 10/149 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + L G+ + I +++ D FD S PE L Sbjct: 85 AAIGQYQDRQERALRERTANTGIEVQRQGDNISLNLPDGIT---FDFGKSALKPEFYTAL 141 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + L + ++ + GHTD+ N RLS +RA + Q L GV +R+ Sbjct: 142 NGVASTLREYNQTMVEVVGHTDSV---GSDAANQRLSEERAGAVAQYLTAQGVQRERMET 198 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338 + G ++ + NRR++I + Sbjct: 199 M-GAGKRYPIADNNTDAGRAKNRRVEIRL 226 >gi|89070689|ref|ZP_01157958.1| OmpA family protein [Oceanicola granulosus HTCC2516] gi|89043710|gb|EAR49914.1| OmpA family protein [Oceanicola granulosus HTCC2516] Length = 229 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 10/138 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + ++ V + T +++++ +FD S+ L + L + Sbjct: 95 EAELRRSLGNNVRIDNTGDSLVVTLPQD---ILFDTDSATLSGSLQSDLNALARSLNNYP 151 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 ++ GHTD + A N LS RA + L+ SGVS RI+ + G Sbjct: 152 STTITVIGHTDNT---GEASYNQNLSRRRAQAVTSTLISSGVSAGRINTV-GRGEDAPIA 207 Query: 323 ASDPMNSA--NRRIDILV 338 + + NRR++I++ Sbjct: 208 TNLTEDGRRQNRRVEIII 225 >gi|323345464|ref|ZP_08085687.1| lipoprotein PG3 [Prevotella oralis ATCC 33269] gi|323093578|gb|EFZ36156.1| lipoprotein PG3 [Prevotella oralis ATCC 33269] Length = 229 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 9/150 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K+++ + V + V+ V + ++ + +F + + + L K Sbjct: 74 MDKVAAETAAQVKNAKVEQVTDANGLKAVKVTF---DSGILFATNKAELNQSSKNELAKF 130 Query: 256 GEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 VL + + I GHTD++ N LS RA S L GVS + + G Sbjct: 131 STVLKKNADCYVDIYGHTDST---GNDGINIPLSNQRAQSVVAYLENCGVSASQFKNVVG 187 Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQ 342 ++D NRR+++ + Q Sbjct: 188 KGSSDPVASNDTKSGRQLNRRVEVYMYASQ 217 >gi|308271281|emb|CBX27889.1| hypothetical protein N47_G32130 [uncultured Desulfobacterium sp.] Length = 403 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 7/105 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293 FD + + VL + ++ + ++ I+GHTD+ + N +LS +RA Sbjct: 299 VYFDTEKWNIVSQYFPVLDNVVGIIKKNPDMKLEIQGHTDSR---GTEKYNQKLSENRAK 355 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 S + L GV +++ G+ + +D + NRR+++ Sbjct: 356 SVLEYLAGKGVVRSKLTA-KGYGYSVPAAPNDTEEGMAKNRRVEL 399 >gi|304408922|ref|ZP_07390543.1| type IV / VI secretion system protein, DotU family [Shewanella baltica OS183] gi|307302925|ref|ZP_07582680.1| type IV / VI secretion system protein, DotU family [Shewanella baltica BA175] gi|304352743|gb|EFM17140.1| type IV / VI secretion system protein, DotU family [Shewanella baltica OS183] gi|306913285|gb|EFN43707.1| type IV / VI secretion system protein, DotU family [Shewanella baltica BA175] Length = 436 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 7/140 (5%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L + ++ + + I + +F + V+ KI L Sbjct: 297 ARLQQLLQTEIGMQLLEVIELPDRVRIRVG---LHHLFTTGGTDINEGFQPVIVKIARAL 353 Query: 260 AHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I + G+TD P + NW LSL RA + L +G + G Sbjct: 354 EGTKGRILVNGYTDDQPIFTSRYPSNWHLSLARANAMADSL-AAGADLHGRLQPEGRGEA 412 Query: 319 RLKIASDP--MNSANRRIDI 336 +D + NRR++I Sbjct: 413 EPVAPNDTPENRALNRRVEI 432 >gi|167588752|ref|ZP_02381140.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu] Length = 224 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 +F + P L + + +S+ G+TD+ N LS R Sbjct: 118 GDALFATGLATLTPTARASLDALLARQGNTAFTRVSVTGYTDSV---GGDASNLALSQRR 174 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 A + L G++ R ++G ++ NRR++I +E Sbjct: 175 AQAVAGYLKSHGLNA-RTVAVTGRGSADPVASNATAEGRASNRRVEISLER 224 >gi|78485928|ref|YP_391853.1| OmpA/MotB [Thiomicrospira crunogena XCL-2] gi|78364214|gb|ABB42179.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2] Length = 259 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 27/245 (11%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK----------S 166 + K ++ K S+ ++ + + L D S Sbjct: 2 NDISDKDLADAIQEHPEFQKKTRASLKKQSVDKEGGQDEWLITYADAMTLILAFFILILS 61 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG-LVADNIVKGVLFETTRTGIL 225 I++ + L + +K+++ + + + S LS L ++ I + Sbjct: 62 ISEIKQDKFETLQTNLGQGLLKKEKVVNPLQNLESALSKVLESNQINPAEAMTLNENELR 121 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRN-IA 281 I D +F+ S+ P++ ++ + + + I GHTD +P + Sbjct: 122 I---DLPGELLFEVGSTQLEPKSKQLITALAKEINAFPLHNYLIEIEGHTDDTPIHSIRF 178 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--------MNSANRR 333 NW LS RA S +V +G+++ R+ I G+A R K + + NRR Sbjct: 179 PSNWELSAGRAISVLKVFFNTGINKQRLKAI-GYADTRPKKPNRTKKGIAIPGNQATNRR 237 Query: 334 IDILV 338 ++I V Sbjct: 238 VEIKV 242 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Query: 1 MNSHGDKNQE---NDQFIIIKK-----KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMW 52 MN DK+ + KK K D W I YAD MT+++AFF+++ Sbjct: 1 MNDISDKDLADAIQEHPEFQKKTRASLKKQSVDKEGGQDEWLITYADAMTLILAFFILIL 60 Query: 53 IINATDDDTKKAIEQYFNP 71 I+ D + ++ Sbjct: 61 SISEIKQDKFETLQTNLGQ 79 >gi|166712665|ref|ZP_02243872.1| OmpA family protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 241 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 71/232 (30%), Gaps = 10/232 (4%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 S L S Q+ ++ + ++ L + + Sbjct: 2 SPAATKSLALALASAIALSACATGGSYVQRDQYGDQTQQQNRTGRNALIGTAIGVAAGLL 61 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + + A + + L G+ + I +++ Sbjct: 62 TGDSATERRQHAMVGAGIGALSGAAIGQYQDRQERALRERTANTGIEVQRQGDNISLNLP 121 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D FD S PE L + L + ++ + GHTD+ N RLS Sbjct: 122 DGIT---FDFGKSALKPEFYTALNGVASTLREYNQTMVEVVGHTDSV---GSDAANQRLS 175 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 +RA + Q L GV +R+ + G ++ + NRR++I + Sbjct: 176 EERAGAVAQYLTAQGVQRERMETM-GAGKRYPIADNNTDAGRAKNRRVEIRL 226 >gi|308273524|emb|CBX30126.1| hypothetical protein N47_D29350 [uncultured Desulfobacterium sp.] Length = 219 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 8/138 (5%) Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268 NI V + GI++S+ + +F+ S+ E +L I V I I Sbjct: 85 KNIDGSVDIKEDERGIVLSLHED---ILFEPGKSVIKKENYRILDSIAAVADACPNKIMI 141 Query: 269 RGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDP 326 GHTD P NW LS R + + + DR + + G+ R ++ Sbjct: 142 MGHTDDLPVQVGEYESNWELSAYRGLYVLNYFINNKHLPPDRFN-VGGYGAFRPLFPNNS 200 Query: 327 M--NSANRRIDILVEDRQ 342 S NRR++I+ + ++ Sbjct: 201 AKNRSLNRRVEIIFKYKE 218 Score = 52.7 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 11/159 (6%), Positives = 51/159 (32%), Gaps = 6/159 (3%) Query: 18 KKKVAIDDTPNN--LGSWKIVYADFMTVLMAFFLVMWIINATDD----DTKKAIEQYFNP 71 K+ + +W + +D + +++ FF+++ +++ + +T ++Q Sbjct: 6 KRSKIETNDETVIKTDTWMVTLSDIIMLMITFFVMLLTMSSINQRSLKNTFNYLKQSIGG 65 Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 S+ I + + + + + I + + + + + + Sbjct: 66 SAYQGHRGSESIENIKAALKNIDGSVDIKEDERGIVLSLHEDILFEPGKSVIKKENYRIL 125 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 ++ + K + ++ + ++ Sbjct: 126 DSIAAVADACPNKIMIMGHTDDLPVQVGEYESNWELSAY 164 >gi|33863187|ref|NP_894747.1| outer membrane protein [Prochlorococcus marinus str. MIT 9313] gi|33635104|emb|CAE21090.1| Bacterial outer membrane protein [Prochlorococcus marinus str. MIT 9313] Length = 214 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 15/132 (11%) Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDAS 275 ILI + +FD + P I LQ + + + S + I GHTD+ Sbjct: 86 VVEKEKEILIELAAD---VLFDFDKANLKPSAIKSLQGVAKRIRESSRGDVRIEGHTDS- 141 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-------- 327 + N LS RA S + G + G + +++ Sbjct: 142 --KGSNEYNQTLSEKRAISVRDWFVSEGGLSNVQFATKGLGELKPVVSNTTEEGADDPIG 199 Query: 328 NSANRRIDILVE 339 NRR++I+++ Sbjct: 200 RQRNRRVEIIIK 211 >gi|312130019|ref|YP_003997359.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132] gi|311906565|gb|ADQ17006.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132] Length = 412 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289 + + F+ + LPE+ L ++ + L + T I I GHTD AR N +LS Sbjct: 302 KLDKVYFNVGQAQILPESYEQLSQLVQYLKVNPTYKIQIEGHTDNQ---GDARANLQLSN 358 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 DRAY+ Q L++ G+ RI G+ + +D NRR++ Sbjct: 359 DRAYNVRQYLIEQGIETSRIK-FKGYGSSKPVSPNDTEENRRKNRRVE 405 >gi|194365341|ref|YP_002027951.1| OmpA/MotB domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194348145|gb|ACF51268.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3] Length = 231 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 10/149 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + L G+ + I++++ D FD + P+ L Sbjct: 85 AAVGQYQDRQERALRERTANTGIDVQRQGDNIMLNLPDGIT---FDFGKATLKPQFYGSL 141 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + L + +I + GHTD+ N RLS +RA S Q L+ GV RI Sbjct: 142 NGVAGTLRDYNQTMIEVVGHTDSI---GSDAVNNRLSKERADSVAQYLVGQGVQSVRIET 198 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338 + G + + NRR++I V Sbjct: 199 L-GAGKSYPIADNSTDAGRAKNRRVEIRV 226 >gi|116332026|ref|YP_801744.1| endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116125715|gb|ABJ76986.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 224 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 78/192 (40%), Gaps = 7/192 (3%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 K + L KS + K N+ LS+ + ++ + ++ ++ + Sbjct: 22 KYESLLKSYEESKLENQRILEEKVNLSRSLNELKRIQEESELRIQEYKRLIATFRSLIDA 81 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 + + +++ + +F S+ I ++++ +LA I GH Sbjct: 82 GKLKIKIIDGRMVVVLSSD---ILFPVGSAFLSSAGIASIREVTTLLASLGGKRFQIEGH 138 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNS 329 TD +P NW L+ RA + ++K+G+ E+RIS S R + + S Sbjct: 139 TDDTPTGIKGYTNWELASSRALNVLHTMIKAGMPEERISAAS-MGASRPALPNTSPENRS 197 Query: 330 ANRRIDILVEDR 341 ANRRI+I++ Sbjct: 198 ANRRIEIVIVPD 209 >gi|172062678|ref|YP_001810329.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6] gi|171995195|gb|ACB66113.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 587 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + +FD + T + E++ + + G+ D N +LS+D Sbjct: 466 DSMSLFDSGKATLRTGTTRAMVDALELIKAHSGKRVLVAGYADDQ---GRPDRNLKLSID 522 Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA + L+++ G+ R I G+ R + + NRR++I + Sbjct: 523 RASAVRDWLVEASGIPPTRF-AIQGYGDTRPVADNATPEGRAKNRRVEITLVPD 575 >gi|158522006|ref|YP_001529876.1| OmpA/MotB domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158510832|gb|ABW67799.1| OmpA/MotB domain protein [Desulfococcus oleovorans Hxd3] Length = 388 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 65/171 (38%), Gaps = 8/171 (4%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 K P EK + + + A I+ V ++ + + Sbjct: 219 KPAPEQAAPAVVEKPRPAPAPQPVVEAAPAIADDDRDGVPNDQDQCPGTPIGAK-VNARG 277 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287 F+++ + + ++ L ++ VL ++ E + ++GHTD+ N L Sbjct: 278 CWVIEGLNFERARADIMADSFAKLDEVVTVLKNNPELRLEVQGHTDSRGNPG---FNQVL 334 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 S RA + + + G++ DR+ GF + +D + NRR+++ Sbjct: 335 SEQRAGAVVRYFVSRGIAADRLVS-KGFGPSQPIADNDTAEGRAENRRVEL 384 >gi|154687112|ref|YP_001422273.1| flagellar motor protein MotS [Bacillus amyloliquefaciens FZB42] gi|154352963|gb|ABS75042.1| YtxE [Bacillus amyloliquefaciens FZB42] Length = 229 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 14/187 (7%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 + S P S +K K + L + + + + A ++ + Sbjct: 49 AEKFQSAVSSIHTNGSGGEPASSDKANENKEQDLL------LQNVKTYIKAHHLSSKLTA 102 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277 + G+++ + + +F + L VL +I +L I + GHTD+ Sbjct: 103 KRDERGVVLVLQEA---VLFQTGKADVLKNAEPVLHQIAVLLKTIPNDIQVEGHTDSRRI 159 Query: 278 RN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 NW LS RA S + + S R G+A + + NRR Sbjct: 160 STYQFPSNWELSSARAASVIRYFTANEDFSAKRFISA-GYADTKPVKDNKSPGHMKENRR 218 Query: 334 IDILVED 340 ++I+++ Sbjct: 219 VEIVIKK 225 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ ++ + W + +AD +T+++ FF++++ ++ D + ++ + G Sbjct: 10 RRNKLEHSG-GSPRWMVTFADLITLILVFFILLFSMSQIDAEKFQSAVSSIHTNGSGGEP 68 Query: 79 ASK 81 AS Sbjct: 69 ASS 71 >gi|126728270|ref|ZP_01744086.1| hypothetical protein SSE37_19807 [Sagittula stellata E-37] gi|126711235|gb|EBA10285.1| hypothetical protein SSE37_19807 [Sagittula stellata E-37] Length = 911 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 101/270 (37%), Gaps = 16/270 (5%) Query: 87 QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146 Q E++ ++D + + + + ++ T ++ +L+ + ++ Sbjct: 643 QREAEQALDTQLDEAEERQLLLSQARDELAQTRERASQSQLKVEALNRNVAELRRQLGEL 702 Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 + S +++ E N L +++E+ ++ + + L Sbjct: 703 QALLDDAKARDAASEVQLQNLGSELNAALARVAQEERRRRVLEEEERKRLEAEKKDLEAY 762 Query: 207 VADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVLA---- 260 ++ + R I I + +F++ S+ P + K+ +L Sbjct: 763 RSEFFGRLRQVVGDRDDIRIEGDRFVFSSEVLFEQGSADLSPLGRREIAKVSNILRRLAR 822 Query: 261 ----HSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYS-AYQVLMKSGVSEDRISKIS 313 +I + GHTD P R A DNW LS RA + ++ G+ +R+ + Sbjct: 823 DIPDEIDWIIRVDGHTDNVPVRGSAEFEDNWDLSQARARAVVKDMIDNYGIPPNRL-AAN 881 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDR 341 GF ++ ++ + NRRI++ + ++ Sbjct: 882 GFGEYQPVNPANTAEARAQNRRIELKLTEK 911 >gi|124002652|ref|ZP_01687504.1| OmpA/MotB [Microscilla marina ATCC 23134] gi|123991880|gb|EAY31267.1| OmpA/MotB [Microscilla marina ATCC 23134] Length = 352 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 7/108 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F S + + +L ++ +L I + GHTD + N LS +R Sbjct: 235 SKVLFAFSKAEIKTVSFSILDEVVRLLKKYPKSNIHLEGHTDNV---GKDQSNLILSKNR 291 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 A S Q + G++ +RI+ I G R + NRR+D++ Sbjct: 292 AASVRQYFINKGINANRITSI-GHGEQRPIDTNTTAKGRQNNRRVDMV 338 >gi|126453039|ref|YP_001067883.1| ompA family protein [Burkholderia pseudomallei 1106a] gi|242315370|ref|ZP_04814386.1| ompA family protein [Burkholderia pseudomallei 1106b] gi|254198619|ref|ZP_04905040.1| ompA family protein [Burkholderia pseudomallei S13] gi|126226681|gb|ABN90221.1| ompA family protein [Burkholderia pseudomallei 1106a] gi|169655359|gb|EDS88052.1| ompA family protein [Burkholderia pseudomallei S13] gi|242138609|gb|EES25011.1| ompA family protein [Burkholderia pseudomallei 1106b] Length = 310 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 84/277 (30%), Gaps = 16/277 (5%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + G+ + P + S +T + + Sbjct: 34 PATVTPIDAGGVPVKSVPLAAPVTAAPVAATAGAGATVSSPPPANATPGQVVAGGKVADE 93 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + Q ++ + +T S N ++ K + Sbjct: 94 ATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQ 153 Query: 192 LQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTPMFDKSSS 242 + + + +A ++ + T + G+ +S +Q T F+ S+ Sbjct: 154 IDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSA 213 Query: 243 IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 P+ +L ++ LA + I GHTD N LS RA + L+ Sbjct: 214 TLTPQGRAILDQMAGALAKMSNRTVEIIGHTDN---SGNRTSNIALSQARADAVKGYLVT 270 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 G++ +++ +G + +D + NRRI+ Sbjct: 271 KGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRIEF 306 >gi|45656435|ref|YP_000521.1| peptidoglycan associated periplasmic protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599670|gb|AAS69158.1| peptidoglycan associated periplasmic protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 660 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 8/148 (5%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 +S L+ + V I Q N F+ S PE+ L ++ E Sbjct: 515 PVSQNLNLSSKKKFSEKVEVILQLPPIRERGSIQINNLFFESKSFQIAPESAPELDRLAE 574 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGF 315 ++ + ++ I I GHTD +DN LS RA + + L K +S+ RI GF Sbjct: 575 IVKENPDIEIQIEGHTDNI---GKKKDNLILSEKRAAAVAEYLFQKHSISKTRIQT-KGF 630 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDR 341 +D + NRR++ + + Sbjct: 631 GDSVPLSKNDSEEARKKNRRVNFTILKK 658 >gi|24216384|ref|NP_713865.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601] gi|24197668|gb|AAN50883.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601] Length = 660 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 8/148 (5%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 +S L+ + V I Q N F+ S PE+ L ++ E Sbjct: 515 PVSQNLNLSSKKKFSEKVEVILQLPPIRERGSIQINNLFFESKSFQIAPESAPELDRLAE 574 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGF 315 ++ + ++ I I GHTD +DN LS RA + + L K +S+ RI GF Sbjct: 575 IVKENPDIEIQIEGHTDNI---GKKKDNLILSEKRAAAVAEYLFQKHSISKTRIQT-KGF 630 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDR 341 +D + NRR++ + + Sbjct: 631 GDSVPLSKNDSEEARKKNRRVNFTILKK 658 >gi|309787755|ref|ZP_07682366.1| inner membrane lipoyiaD domain protein [Shigella dysenteriae 1617] gi|308924505|gb|EFP70001.1| inner membrane lipoyiaD domain protein [Shigella dysenteriae 1617] Length = 147 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 8 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 64 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 65 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 120 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 121 PANPIASNSTAEGKAQNRRVEITL 144 >gi|329902399|ref|ZP_08273103.1| Outer membrane lipoprotein omp16 precursor [Oxalobacteraceae bacterium IMCC9480] gi|327548814|gb|EGF33448.1| Outer membrane lipoprotein omp16 precursor [Oxalobacteraceae bacterium IMCC9480] Length = 224 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 + FD + S P+ VL + G L + + +I GHTD + A N LS+D Sbjct: 114 PSDISFDTNRSDIKPDFRPVLDRFGNSLNDNASTVVTIIGHTDNT---GSAAINDPLSVD 170 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 RA L+ GV+ R I G + +++ + NRR++I V +RQ Sbjct: 171 RAGRTRDYLISRGVAPYRF-TIEGRGENDPIASNNDSTGRARNRRVEIFVAERQ 223 >gi|313681313|ref|YP_004059051.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994] gi|313154173|gb|ADR32851.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994] Length = 367 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ E + + L S +I GHTD++ N +LS RA Sbjct: 265 FATDSTKVDAEGAAKVAEFASFLKESPAYKANIVGHTDST---ASDAYNQKLSEKRAAKV 321 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 +L++ GV R++ G ++ + NRRI++ + Sbjct: 322 KSMLIEDGVDSSRLTS-EGMGEKMPIASNKTKEGRAENRRIEVEL 365 >gi|307312753|ref|ZP_07592383.1| OmpA/MotB domain protein [Escherichia coli W] gi|306907188|gb|EFN37694.1| OmpA/MotB domain protein [Escherichia coli W] gi|315062099|gb|ADT76426.1| Putative outer membrane protein/OmpA domain protein [Escherichia coli W] gi|323377319|gb|ADX49587.1| OmpA/MotB domain protein [Escherichia coli KO11] Length = 550 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + + + V + + + +FD + + VL Sbjct: 399 EQIRQPVLRAIRDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 453 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + + G+TDA+ + N +LSL RA + ++++ Sbjct: 454 VDTLVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + G + +D + NRR++I + R Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542 >gi|302326566|gb|ADL25767.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 215 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 83/211 (39%), Gaps = 14/211 (6%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 ++ ++ + + ++ K ++I + S + K+ ++ Sbjct: 8 AEIAKLQGETQAIQNHIAENWEKRAATNRTIEAIQEQIGEARSGKVSDLEAEKQAIKAQK 67 Query: 197 KKISSTLSGLVADNIV---KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 K+ ++ + + + + GI++S+ D +FD + + + L Sbjct: 68 DKLEASKNEAMDKLNALQSQMIQVTKDARGIILSMSD----ILFDVGRATLKTDLMTSLA 123 Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 KI +L+ + SI G+TD + N LS RA + + L++ G++E R++ Sbjct: 124 KIAGILSVYQQFDVSIEGNTDNT---GSEEFNMTLSQQRAENVMKFLVEQGIAETRLTA- 179 Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 G + NRR+D+++ DR Sbjct: 180 KGLGMTMPIADNSTKEGRQKNRRVDLVITDR 210 >gi|295134535|ref|YP_003585211.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda SM-A87] gi|294982550|gb|ADF53015.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda SM-A87] Length = 232 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 17/155 (10%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 R+ AKKI + + G + + +G+ D+ + F ++ Sbjct: 79 RMDKQAKKIETEVPGAEVERVGEGINVT----------FDENSGVYFATEKYNINAKSEE 128 Query: 251 VLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L K+ + + + GHTD + N LS +RA + L G++ R Sbjct: 129 TLNKLANIFKEYPDTNILVEGHTDNT---GSESYNLTLSKNRAQAVTNFLTDHGIAASRF 185 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + + K + NRR++I + + Sbjct: 186 DT-KWYGEAQPKYDNSTAEGRSKNRRVEIAIVANE 219 >gi|293194231|ref|ZP_06609953.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces odontolyticus F0309] gi|292819750|gb|EFF78763.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces odontolyticus F0309] Length = 403 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 89/297 (29%), Gaps = 18/297 (6%) Query: 51 MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110 + + A+ N T S I + S + + + Sbjct: 113 LVSGSTVLGGDGSAVSSSDKGTVVNDGTGSGVITEGPISIIYGGDGSGTYSNADTMVTIT 172 Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 V+ T + + + S + D G+ + + + + Sbjct: 173 VEADGSGTYSTTTTSIILDGNGGGNYSNANSMESIINNGDG-SGQFSKGTVTIINNGDGT 231 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 +Y L+ + + + L G +I++ D Sbjct: 232 GSYSDEKLTIQNNGNGTATVNGVTVNDAPKVEKVSKLGKFPAVESLKPVESCGTVITLED 291 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289 +FD S PE L+ + VL + I GHTD+ + N +LS Sbjct: 292 ---GVLFDFGKSDIRPEAAQTLKSLAGVLNNAKVPTAHIYGHTDSI---SDEAFNLQLSQ 345 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILV 338 +RA + L K GVS I +G+ + ++ + NRR++I + Sbjct: 346 ERADAVSAELKKDGVSA--ILDATGYGESKPVAPNENADGSDNPAGRALNRRVEIFI 400 >gi|224369820|ref|YP_002603984.1| OmpA2 [Desulfobacterium autotrophicum HRM2] gi|223692537|gb|ACN15820.1| OmpA2 [Desulfobacterium autotrophicum HRM2] Length = 503 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 7/105 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD + + P + L + +L + I ++GHTD N +LSL R+ + Sbjct: 400 LFDYNKADIKPTSFDELDNVAMILKKNPALKIDLQGHTDNI---GSKNFNMKLSLKRSAA 456 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 L+ GV +R+ GF R + + NRR+++L Sbjct: 457 VKTYLVSKGVPSERLKT-EGFGFSRPVDTNKTKEGRAKNRRVELL 500 >gi|148260706|ref|YP_001234833.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5] gi|326403901|ref|YP_004283983.1| hypothetical protein ACMV_17540 [Acidiphilium multivorum AIU301] gi|146402387|gb|ABQ30914.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5] gi|325050763|dbj|BAJ81101.1| hypothetical protein ACMV_17540 [Acidiphilium multivorum AIU301] Length = 342 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 97/334 (29%), Gaps = 22/334 (6%) Query: 27 PNNLGSWKIVYAD-FMTVLMA------FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 N L W Y D T+LM F++ + + L Sbjct: 9 NNGLEIWPG-YVDALSTLLMVTIFVLLVFVLAEAFLSVALSGRNKTITALRSEIAQLSHV 67 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + + + L + ++ + K + Q Sbjct: 68 LALQKSKTASLQDELASMASLMKAAKTREAALMAANAALTAKTATLGAAVTAAGGKLAGQ 127 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + L S + + +I + +E + +RL + + Sbjct: 128 VKLNAQELQTVSLLNQQIAALRLQLATIAAALDAAQKKDQEEHVQIADLGQRLNEALARK 187 Query: 200 SSTLSGLVADNIV--KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 +L ++ + L + ++ + +F S+ + + K+ + Sbjct: 188 VQSLEQYRSEFFGVLRKALADQKDIKVVGDRFVFESAVLFPSDSARLSAKGKAEIAKVAQ 247 Query: 258 VLA--------HSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + V+S+ G+ D +DN+ LS RA S +L+ GV ++R Sbjct: 248 AIEAIAPKIPDKINWVLSVTGYADKEAITGGPYKDNFDLSAARALSVLHLLIADGVPKNR 307 Query: 309 ISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 + GF + + NRRI+ + Sbjct: 308 VVAA-GFGADHPIATGNTPQDLAQNRRIEFRLTS 340 >gi|294783516|ref|ZP_06748840.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA] gi|294480394|gb|EFG28171.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA] Length = 102 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 5/105 (4%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S+ P+ +L + + + + ++I GHTD+ + N LS RA + Sbjct: 1 FDKSVVKPQYFEMLNNLKDFIEQNNYELTIEGHTDSV---GSNQYNIGLSRRRAEAVKAK 57 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 L++ G+ EDRI I ++ NRR++ + R Sbjct: 58 LIEFGLPEDRIVGIEAKGEEYPVATNETPEGRLQNRRVEFRLVQR 102 >gi|148555237|ref|YP_001262819.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1] gi|148500427|gb|ABQ68681.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1] Length = 222 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV E +L+++ F +S P+ L K+ Sbjct: 78 YMDRQEAKLREQTAGTGVEVERQGDELLLNMPAGIT---FATNSYEVQPQFRTTLDKVAS 134 Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L+ + + GHTD++ N LS +RA + L GV+ RI GF Sbjct: 135 TLSEYGKTYVDVYGHTDST---GSDAINEPLSRNRAEAVANYLSGHGVAAARIGT-QGFG 190 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 + ++ ANRR++I + Sbjct: 191 SRQPVASNATPDGRQANRRVEIKI 214 >gi|78223923|ref|YP_385670.1| OmpA/MotB [Geobacter metallireducens GS-15] gi|78195178|gb|ABB32945.1| OmpA/MotB [Geobacter metallireducens GS-15] Length = 398 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 58/195 (29%), Gaps = 17/195 (8%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + P L + + L I L + D Sbjct: 218 PQRCSMKTPAIQPAPPQVQAPAVKVDPKLGAFGDVTLPDGVTLNIPEFGIERKLLAFIQD 277 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISI 268 + F+ S++ P + L I +L +V I I Sbjct: 278 GARPVDKTTWFTF----------DRLQFETGSAVLKPSSQEQLGNIAAILKAFPQVAIKI 327 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 G+TD + N +LS DRA + Q L+K G+ R+ G+ + Sbjct: 328 GGYTDNV---GDPQANLKLSRDRASNTMQELVKLGIDPSRLES-EGYGEEHPVADNATEE 383 Query: 329 SA--NRRIDILVEDR 341 NRRID+ V + Sbjct: 384 GRQQNRRIDVRVTKK 398 >gi|167722035|ref|ZP_02405271.1| hypothetical protein BpseD_23689 [Burkholderia pseudomallei DM98] Length = 433 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 75/229 (32%), Gaps = 12/229 (5%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +Q ++ + + L +S S + Sbjct: 205 EQIRQRLWTLITGARDAIQPELSLRWRGAEPGRLPLLRSVPAWASGALVFLLLFGLFAFY 264 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233 + + + L+ I+ + +L + L+++ + R Sbjct: 265 QYRLLTERNALEARILAIAKDEPAPPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRG 324 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292 MF S LPE VL K+ +A +++ GH+D P R +N LS RA Sbjct: 325 DSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 384 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 Q+L++ G DRI G + + S NRR++I V Sbjct: 385 AYVAQILVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 432 >gi|167618284|ref|ZP_02386915.1| ompA family protein [Burkholderia thailandensis Bt4] Length = 171 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F P +L + L + ++ S+ G+TD++ A N LS + Sbjct: 59 PSSVTFATDQYAVTPAFTPLLNDLATTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 115 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + GV+ R+S G + + NRR++I + Q Sbjct: 116 RAQSVVNALAQRGVAATRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 168 >gi|332886090|gb|EGK06334.1| hypothetical protein HMPREF9456_00208 [Dysgonomonas mossii DSM 22836] Length = 295 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 9/158 (5%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + K R L + + L+ + + ++ + + + + IS+ D+ ++ Sbjct: 121 QAKNRSDSLNIVMINNLTRSLTRDEMQDLDIKVLKGVVYISLDDRM---LYRSGGYEIST 177 Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-G 303 + +L KI +++ + + G+TD P R+NW LS RA S Q L + G Sbjct: 178 KAGEILSKIAKIIMDYKDYSVLVEGNTDTDPISRPNIRNNWDLSALRASSVVQALQNNYG 237 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 V R++ G + + NRR I++ Sbjct: 238 VDPKRLTAA-GRGEYNPIATNSTAEGKALNRRTQIIIT 274 >gi|261210838|ref|ZP_05925129.1| outer membrane protein A precursor [Vibrio sp. RC341] gi|260840088|gb|EEX66683.1| outer membrane protein A precursor [Vibrio sp. RC341] Length = 309 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 9/116 (7%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + + + +F +SS+ + L+ +VL + ++I GHTD+ + N Sbjct: 198 VVVFTSSSEKLFSNNSSLL--MSTKSLEGPLDVLKKDPKLKVNIVGHTDSL---GSDKYN 252 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 +S RA + + +G+S RI+ + G ++ + NRR++I + Sbjct: 253 QWMSERRAKTVADYFIANGISPSRITAL-GRGESEPIANNNSELGRAQNRRVEINI 307 >gi|188575664|ref|YP_001912593.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520116|gb|ACD58061.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 241 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 10/149 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + L G+ + I +++ D FD S PE L Sbjct: 85 AAIGQYQDRQERALRERTANTGIEVQRQGDNISLNLPDGIT---FDFGKSALKPEFYTAL 141 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + L + ++ + GHTD+ N RLS +RA + Q L GV +R+ Sbjct: 142 NGVASTLREYNQTMVEVVGHTDSV---GSDAANQRLSEERAGAVAQYLTAQGVQRERMET 198 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338 + G ++ + NRR++I + Sbjct: 199 M-GAGKRYPIADNNTDAGRAKNRRVEIRL 226 >gi|188036026|pdb|2K1S|A Chain A, Solution Nmr Structure Of The Folded C-Terminal Fragment Of Yiad From Escherichia Coli. Northeast Structural Genomics Consortium Target Er553 Length = 149 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 2 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 58 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 59 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 114 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 115 PANPIASNSTAEGKAQNRRVEITL 138 >gi|329946279|ref|ZP_08293873.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328527571|gb|EGF54566.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 416 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 73/282 (25%), Gaps = 18/282 (6%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 + + G + S + + G + Sbjct: 140 GSMTTSSGSTAVTNNGDGSGTFSDGKVSITNNGDGSGTYSDGKVSIVVNGDGSGTYSDDH 199 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 L + + S+ S G ++ N + + + + Sbjct: 200 LSVVVNGDGSGTYSDSTTGESIVLSGDGSGTYSRGEVSIVNNGDGSGTYSDSTTSIVNDG 259 Query: 187 KRKKRLQDLAKKISSTLSGLVADNI-VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + G +I++ D +FD SS Sbjct: 260 TGSAIVNGRTVSAKPVPKAGKVGTFPSIDAAKPVQSCGTVITLEDS---VLFDFGSSDLR 316 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 E L + VL S ++GHTD+ + N LS RA + L GV Sbjct: 317 SEASTTLTNLATVLKDSKAPKVQVQGHTDSV---SDDASNQTLSEQRAKAVTDALTSDGV 373 Query: 305 SEDRISKISGFAHHRLKIASDP--------MNSANRRIDILV 338 + I + G+ R ++ NRR+++ V Sbjct: 374 TAA-IESV-GYGETRPVAPNESSDGFDNPAGRRLNRRVEVFV 413 >gi|46579053|ref|YP_009861.1| chemotaxis protein PomB [Desulfovibrio vulgaris str. Hildenborough] gi|120603363|ref|YP_967763.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4] gi|46448466|gb|AAS95120.1| chemotaxis protein PomB [Desulfovibrio vulgaris str. Hildenborough] gi|120563592|gb|ABM29336.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4] gi|311232899|gb|ADP85753.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1] Length = 257 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 83/215 (38%), Gaps = 4/215 (1%) Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 ++ K + + + + +++ ++ P ++ ++L Sbjct: 37 DMMSLLLCFFILLLSFAKTDIAKFQAALGSIQDAFGVQRERPQDIEAAFSPTTESQVLIT 96 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 ++ + +++ L LV + + I++ + +F+ S+ LP Sbjct: 97 EKLDAAEQEQLEVARMLKELVNEQAEIAKNAIISAEEGGINLRVN-SRALFEPGSARLLP 155 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDAS-PFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + V++ + +L + + GHT + PF + +W LS RA + + ++ GVS Sbjct: 156 DGEAVIRLVHTILLKHKYDLIVEGHTGSREPFSSQFPTHWELSAARAVTLVRHILSLGVS 215 Query: 306 EDRISKISGFAHHRLKIA-SDPMNSANRRIDILVE 339 R+ + G+ R + +D NRR++ Sbjct: 216 PRRLKAV-GYGDTRPLVPENDDTGELNRRVEFFFR 249 >gi|78356759|ref|YP_388208.1| chemotaxis protein PomB [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219164|gb|ABB38513.1| chemotaxis protein PomB [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 253 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 75/241 (31%), Gaps = 11/241 (4%) Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163 D + + L + K Sbjct: 8 APPPPKRQDDTPCEEGLPPWMATFADMMSLLLCFFVLLLSFAQQDANKFKTLMGSIKEAF 67 Query: 164 EKSINKEEN--YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 I ++E P E+ K+ + L + + + K T Sbjct: 68 GVQIKRKEASFAAFSPSEFERKDVELDKENKELLGMVLEVKNFVIQDPELKKTAKITTED 127 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR--N 279 G++I I + +F S+ PLP+ + +L + +R HT + Sbjct: 128 AGVVIRI---PSYALFAPGSAKPLPDAASKTATVVRILRERNLDLVVRCHTSDEKAEEES 184 Query: 280 IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 + NW LS RA + ++L+K G + R+ + G+A + + ++ + N R++ Sbjct: 185 LYPSNWELSSARAAAVLRLLIKEGDIPPSRMKAV-GYADSQPLLPNNTDENRAINSRMEF 243 Query: 337 L 337 Sbjct: 244 Y 244 Score = 37.6 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 3/87 (3%) Query: 5 GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 ++++ K+ L W +AD M++L+ FF+++ D + K Sbjct: 2 AAEDKKAPPPP---KRQDDTPCEEGLPPWMATFADMMSLLLCFFVLLLSFAQQDANKFKT 58 Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPE 91 + + + F +P E Sbjct: 59 LMGSIKEAFGVQIKRKEASFAAFSPSE 85 >gi|323699159|ref|ZP_08111071.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132] gi|323459091|gb|EGB14956.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132] Length = 351 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F E + VL++ +L + I GHTD++ N LS RA S Sbjct: 250 FGFDKYQITDEMVPVLEQAKMILEEDTAATYEISGHTDST---GTEAYNQGLSERRANSV 306 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 + L +GVS DR+ G+ K + NRR++I Sbjct: 307 MKWLTDNGVSADRLEA-KGYGELAPKYDNATKEGRKLNRRVEI 348 >gi|256425882|ref|YP_003126535.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] gi|256040790|gb|ACU64334.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] Length = 630 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD + + L ++ +L + I I GHTD +DN LS R Sbjct: 523 HNIFFDTRQFALKTGSELELNRLVALLRENPTVTIEISGHTDNI---GNTKDNVLLSERR 579 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 A + + L+ G++ +R+ G+ + + + NRR ++ + Sbjct: 580 AQAVVKYLVDKGIAAERLQA-KGYGETKPVADNMTAAGRAENRRTELKIL 628 >gi|313144174|ref|ZP_07806367.1| OmpA family protein [Helicobacter cinaedi CCUG 18818] gi|313129205|gb|EFR46822.1| OmpA family protein [Helicobacter cinaedi CCUG 18818] Length = 156 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 12/148 (8%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L + GV GI++++ F S + VL + Sbjct: 9 YMDYQDKQLRKELQGTGVSVSREGDGIILNMPGDIT---FKSGSDDLSSDFYKVLN--KK 63 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL ++++ G TD + + N LS RA S L V +R + G Sbjct: 64 VLNKYDKTIVTVVGFTDNT---GSDKTNLALSKKRAESVAAYLQNQKVKTERFV-VDGLG 119 Query: 317 HHRLKIASDPM--NSANRRIDILVEDRQ 342 ++ + NRR++I + Q Sbjct: 120 ESEPIASNKTAEGRAKNRRVEISLTAIQ 147 >gi|193065118|ref|ZP_03046192.1| OmpA domain protein [Escherichia coli E22] gi|194426303|ref|ZP_03058858.1| OmpA domain protein [Escherichia coli B171] gi|260845464|ref|YP_003223242.1| putative outer membrane lipoprotein [Escherichia coli O103:H2 str. 12009] gi|192927249|gb|EDV81869.1| OmpA domain protein [Escherichia coli E22] gi|194415611|gb|EDX31878.1| OmpA domain protein [Escherichia coli B171] gi|257760611|dbj|BAI32108.1| predicted outer membrane lipoprotein [Escherichia coli O103:H2 str. 12009] Length = 550 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + + + V + + + +FD + + VL Sbjct: 399 EQIRQPVLRAIRDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 453 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + + G+TDA+ + N +LSL RA + ++++ Sbjct: 454 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + G + +D + NRR++I + R Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542 >gi|327404330|ref|YP_004345168.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327319838|gb|AEA44330.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 809 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 76/273 (27%), Gaps = 16/273 (5%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 +L + G+ + Q P+R D + + ++ + Sbjct: 535 DLCPETPGLLEFQGCPDRDGDKIPDKDDACPDLPGLALYRGCPDTDEDGIIDPNDSCPTV 594 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL-AMKRKKRLQ 193 C + + +DLC + + L + R Sbjct: 595 KGLAAFNGCPDRDGDGLQDSEDLCPDLPGPLANQGCPDSDNDGLYDNVDKCPNEYGSREN 654 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--------FDKSSSIPL 245 + + GL + + I + + F +I L Sbjct: 655 EGCPWPDTDKDGLYDKDDACPTIPGPIENRGCPKIEKEEQEILNTAFENLEFASGKAIIL 714 Query: 246 PETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + L + +L + I GHTD + A+ N LS +RA + + L GV Sbjct: 715 ATSFKSLDDLAALLIKKPEWKLQIAGHTDN---KGDAKKNLTLSKNRAEAVKKYLTSKGV 771 Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRID 335 ++ F + + NRR++ Sbjct: 772 DATKLKP-EWFGQTKPIATNATPEGRQKNRRVE 803 >gi|253700958|ref|YP_003022147.1| OmpA/MotB domain protein [Geobacter sp. M21] gi|251775808|gb|ACT18389.1| OmpA/MotB domain protein [Geobacter sp. M21] Length = 222 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 9/137 (6%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + E I +++ + +FDK+ + P + L + L S Sbjct: 78 QAVALKKNLPEAQVERQGEKIYVTL---PSGILFDKNKDLLKPAFMESLARAASSLRESQ 134 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I I+GHTD+ N LS RA L+ GV R+ I G+ R + Sbjct: 135 TDIIIQGHTDS---SGSDAINLPLSQRRADRVRDYLVAQGVPTSRLIAI-GYGATRPQFP 190 Query: 324 SDPMNSA--NRRIDILV 338 +D + NRR+ + + Sbjct: 191 NDSEANRLLNRRVQLEI 207 >gi|134283190|ref|ZP_01769891.1| ompA family protein [Burkholderia pseudomallei 305] gi|134245385|gb|EBA45478.1| ompA family protein [Burkholderia pseudomallei 305] Length = 312 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 84/277 (30%), Gaps = 16/277 (5%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + G+ + P + S +T + + Sbjct: 36 PAAVTPIDAGGVPVKSVPLAAPVTAAPVAATAGAGATVSPPPPANATPGQVVAGGKVADE 95 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + Q ++ + +T S N ++ K + Sbjct: 96 ATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQ 155 Query: 192 LQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTPMFDKSSS 242 + + + +A ++ + T + G+ +S +Q T F+ S+ Sbjct: 156 IDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSA 215 Query: 243 IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 P+ +L ++ LA + I GHTD N LS RA + L+ Sbjct: 216 TLTPQGRAILDQMAGALAKMSSRTVEIIGHTDN---SGNRTSNIALSQARADAVKGYLVT 272 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 G++ +++ +G + +D + NRRI+ Sbjct: 273 KGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRIEF 308 >gi|86160609|ref|YP_467394.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85777120|gb|ABC83957.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter dehalogenans 2CP-C] Length = 248 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 7/118 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286 +++ + +FD SS PE I L+++G++LA + I I G+TD++ N Sbjct: 133 LVEMKGDILFDSGSSALKPEAIGKLEQMGDILAKYGDDRIRIEGYTDST---GSKSMNEE 189 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 LSL RA + +VL+ GV E +I+ + G R + + NRR+++ ++ Sbjct: 190 LSLRRADAVKRVLVGRGVQEKQITAL-GMGPVRPVADNGSATGRAQNRRVELHIDVPN 246 >gi|315637845|ref|ZP_07893035.1| fibronectin-binding protein [Campylobacter upsaliensis JV21] gi|315482086|gb|EFU72700.1| fibronectin-binding protein [Campylobacter upsaliensis JV21] Length = 327 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + P +Q I +VL + + +I GHTD + N +LS RA Sbjct: 223 FEFDKTTINPAFESRIQNIAKVLEENEKYNTILEGHTDNT---GSRAYNQKLSERRAQRV 279 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 LMK G+ + RI ++ G+ + + +++ NRR++ Sbjct: 280 ANELMKFGIEKSRI-EVKGYGQDKPRSSNETKEGRADNRRVE 320 >gi|76818070|ref|YP_336766.1| hypothetical protein BURPS1710b_A1609 [Burkholderia pseudomallei 1710b] gi|126457603|ref|YP_001074182.1| hypothetical protein BURPS1106A_A0139 [Burkholderia pseudomallei 1106a] gi|134280945|ref|ZP_01767655.1| SciP protein [Burkholderia pseudomallei 305] gi|167826573|ref|ZP_02458044.1| hypothetical protein Bpseu9_23060 [Burkholderia pseudomallei 9] gi|167848091|ref|ZP_02473599.1| hypothetical protein BpseB_22661 [Burkholderia pseudomallei B7210] gi|167905011|ref|ZP_02492216.1| hypothetical protein BpseN_22374 [Burkholderia pseudomallei NCTC 13177] gi|167913331|ref|ZP_02500422.1| hypothetical protein Bpse112_22785 [Burkholderia pseudomallei 112] gi|226198766|ref|ZP_03794330.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9] gi|242313911|ref|ZP_04812928.1| OmpA family protein [Burkholderia pseudomallei 1106b] gi|254189633|ref|ZP_04896143.1| SciP protein [Burkholderia pseudomallei Pasteur 52237] gi|254195529|ref|ZP_04901957.1| SciP protein [Burkholderia pseudomallei S13] gi|76582543|gb|ABA52017.1| OmpA family membrane protein [Burkholderia pseudomallei 1710b] gi|126231371|gb|ABN94784.1| OmpA family protein [Burkholderia pseudomallei 1106a] gi|134247967|gb|EBA48051.1| SciP protein [Burkholderia pseudomallei 305] gi|157937311|gb|EDO92981.1| SciP protein [Burkholderia pseudomallei Pasteur 52237] gi|169652276|gb|EDS84969.1| SciP protein [Burkholderia pseudomallei S13] gi|225929206|gb|EEH25229.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9] gi|242137150|gb|EES23553.1| OmpA family protein [Burkholderia pseudomallei 1106b] Length = 433 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 75/229 (32%), Gaps = 12/229 (5%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +Q ++ + + L +S S + Sbjct: 205 EQIRQRLWTLITGARDAIQPELSLRWRGAEPGRLPLLRSVPAWASGALVFLLLFGLFAFY 264 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233 + + + L+ I+ + +L + L+++ + R Sbjct: 265 QYRLLTERNALEARILAIAKDEPAPPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRG 324 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292 MF S LPE VL K+ +A +++ GH+D P R +N LS RA Sbjct: 325 DSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 384 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 Q+L++ G DRI G + + S NRR++I V Sbjct: 385 AYVAQILVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 432 >gi|289662994|ref|ZP_06484575.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 241 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 10/149 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + L G+ + I +++ D FD S PE L Sbjct: 85 AAIGQYQDRQERALRERTANTGIEVQRQGDNISLNLPDGIT---FDFGKSALKPEFYTAL 141 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + L + ++ + GHTD+ N RLS +RA + Q L GV +R+ Sbjct: 142 NGVASTLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERAGAVAQYLTAQGVQRERMDT 198 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338 + G ++ + NRR++I + Sbjct: 199 M-GAGKRYPIADNNTDAGRAKNRRVEIRL 226 >gi|281425749|ref|ZP_06256662.1| lipoprotein PG3 [Prevotella oris F0302] gi|281400157|gb|EFB30988.1| lipoprotein PG3 [Prevotella oris F0302] Length = 225 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 9/145 (6%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + + + V+ V + ++ + +F + + + L K +VL Sbjct: 74 AAQAAQIRNAKVEEVTDANGLKAVKVTF---DSGILFATNQATLTSSSKNDLAKFSKVLK 130 Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 +++ + I GHTD + N LS RA S L + GVS + + G Sbjct: 131 DNSDCHVDIYGHTDTT---GNDGINIPLSNRRAESVVNYLKQCGVSGSQFKNVVGKGSAE 187 Query: 320 LKIASDPMNSA--NRRIDILVEDRQ 342 + NRR+++ + Q Sbjct: 188 PVADNSTAAGRKQNRRVEVYLYASQ 212 >gi|300955043|ref|ZP_07167452.1| OmpA family protein [Escherichia coli MS 175-1] gi|300318040|gb|EFJ67824.1| OmpA family protein [Escherichia coli MS 175-1] Length = 215 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 10/143 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDIL 337 ++ + NRR++I Sbjct: 193 PANPIASNSTAEGKAQNRRVEIT 215 >gi|92116250|ref|YP_575979.1| OmpA/MotB [Nitrobacter hamburgensis X14] gi|91799144|gb|ABE61519.1| OmpA/MotB [Nitrobacter hamburgensis X14] Length = 463 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + P++I +L ++ E L T I I GHTD+ A N LS RA + Sbjct: 361 FETGRATLDPDSIGLLDRLTETALRCPTATIEIAGHTDSD---GDASFNQTLSERRAQAV 417 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 L+K+G+ DR + G+ + A+D + NRRID V Sbjct: 418 VDYLVKAGMPADRFKPM-GYGSVQPIAANDTDEGKAKNRRIDFTVRQ 463 >gi|71909465|ref|YP_287052.1| surface antigen protein [Dechloromonas aromatica RCB] gi|71849086|gb|AAZ48582.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Dechloromonas aromatica RCB] Length = 221 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288 D + FD P VL + L + + I GHTD N LS Sbjct: 109 DIPSDLSFDSGHYDINPALHAVLDRFASTLIQNPVTHVRIVGHTDNV---GGDAINNPLS 165 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 ++RA + L GV+ +RI I G H + + NRR++I V Sbjct: 166 VNRAAATRDYLASRGVASNRI-SIDGRGSHEPIADNSTPAGRAKNRRVEIFV 216 >gi|258404319|ref|YP_003197061.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257796546|gb|ACV67483.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692] Length = 428 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 8/115 (6%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287 +D + +FD S+ + L +L + E I GHTD++ A N L Sbjct: 318 MDVSISILFDIDKSVVRGDYHDELADATAMLNKNPEANAVIEGHTDST---ASAAYNMEL 374 Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 S RA S L+ + + R+S + + + NRR+ I ++ Sbjct: 375 SKKRAQSVRDYLVDTFDIDPQRLST-KAYGESQPTATNTTRFGRKLNRRVVITLQ 428 >gi|254515071|ref|ZP_05127132.1| flagellar motor protein [gamma proteobacterium NOR5-3] gi|219677314|gb|EED33679.1| flagellar motor protein [gamma proteobacterium NOR5-3] Length = 216 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 14/124 (11%) Query: 225 LISIIDQR----NTPMFDKSSSIPLPETIVVLQKIGE----VLAHSTEVISIRGHTDASP 276 I+I D R + +F +S E +L + L + +++ I G TD P Sbjct: 77 RITINDGRIGISGSVLFALNSDRLQEEGRELLVTLAAPLEVFLQENDQLLMISGFTDDLP 136 Query: 277 FRNI---ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN 331 ++ DNW LS RA + + L+ +G+ DR+ + F + + + + N Sbjct: 137 IQSGNLNFADNWELSAQRALTVTRELVAAGLPADRVFAAA-FGDQQPVAPNLDESGRALN 195 Query: 332 RRID 335 RR++ Sbjct: 196 RRVE 199 >gi|299140724|ref|ZP_07033862.1| lipoprotein PG3 [Prevotella oris C735] gi|298577690|gb|EFI49558.1| lipoprotein PG3 [Prevotella oris C735] Length = 225 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 9/145 (6%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + + + V+ V + ++ + +F + + + L K +VL Sbjct: 74 AAQAAQIRNAKVEEVTDANGLKAVKVTF---DSGILFATNQATLTSSSKNDLAKFSKVLK 130 Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 +++ + I GHTD + N LS RA S L + GVS + + G Sbjct: 131 DNSDCHVDIYGHTDTT---GNDGINIPLSNRRAESVVNYLKQCGVSGSQFQNVVGKGSAE 187 Query: 320 LKIASDPMNSA--NRRIDILVEDRQ 342 + NRR+++ + Q Sbjct: 188 PVADNSTAAGRKQNRRVEVYLYASQ 212 >gi|237508587|ref|ZP_04521302.1| type IV/VI secretion system protein, DotU family [Burkholderia pseudomallei MSHR346] gi|235000792|gb|EEP50216.1| type IV/VI secretion system protein, DotU family [Burkholderia pseudomallei MSHR346] Length = 439 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 62/163 (38%), Gaps = 12/163 (7%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RNTPMFDK 239 + L+ I+ + +L + L+++ + R MF Sbjct: 277 ERNALEARIVAIAKDEPAPPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRGDSMFRS 336 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQV 298 S LPE VL K+ +A +++ GH+D P R +N LS RA Q+ Sbjct: 337 GESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRAAYVAQI 396 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 L++ G DRI G + + S NRR++I V Sbjct: 397 LVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 438 >gi|148652893|ref|YP_001279986.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1] gi|148571977|gb|ABQ94036.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1] Length = 314 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 8/110 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293 +F+ S+ P L ++ + + I +I GHTD N LS RA Sbjct: 208 VLFETDKSVVRPSYYRKLSEVADFMNKYPSTIATIEGHTDDR---ASDSYNLALSQRRAD 264 Query: 294 SAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 + V + + + +R+ I G+ + + +D NRR+ ++E+ Sbjct: 265 AVRNVFIHEFDIDSNRLKAI-GYGESKPRATNDTAEGRQLNRRVMAVIEE 313 >gi|298208747|ref|YP_003716926.1| OmpA family protein [Croceibacter atlanticus HTCC2559] gi|83848674|gb|EAP86543.1| OmpA family protein [Croceibacter atlanticus HTCC2559] Length = 233 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 8/142 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + G E GI+++ D+ + FD + S ++ L K+ VL Sbjct: 83 QAQKIEQEIPGAQVERIDDGIVVTF-DENSGVYFDTNKSNINAKSQETLDKLSNVLVEYP 141 Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + GHTD++ A N LS DRA S G+S R + F + Sbjct: 142 NTDVLVVGHTDST---GSAEYNMSLSRDRANSVTNYFTSKGLSSGRFTT-KWFGETKPAY 197 Query: 323 ASDPM--NSANRRIDILVEDRQ 342 +D + NRR+ + + + Sbjct: 198 TNDTAEGRAKNRRVQLAILPNE 219 >gi|254486344|ref|ZP_05099549.1| flagellar motor protein [Roseobacter sp. GAI101] gi|214043213|gb|EEB83851.1| flagellar motor protein [Roseobacter sp. GAI101] Length = 598 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 82/241 (34%), Gaps = 16/241 (6%) Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + ++ ++ L N Q E + + L +N Sbjct: 361 ETATSAAAQRQTELLNQQVAALRGQLGELQSLLDDAVARDAVKEVQLQSLGSDLNTALAR 420 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + L +KRL+ K + S + +L I + Sbjct: 421 VAAEERRRAELEAAERKRLEAETKNLEQYRSEFFGRL--RDLLGNQAGVRIEGDRFVFSS 478 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASPFRN--IARD 283 +F ++ + + K+ E+L VI + GHTD P D Sbjct: 479 EVLFPPGAAQLSTDGQREIAKVAEILRNIAADIPPEIDWVIRVDGHTDNQPLSGLGAFAD 538 Query: 284 NWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340 NW LS RA S + ++ G++ DR+ +GF ++ S+ + NRRI++ + + Sbjct: 539 NWELSQARALSVVKYMINFLGIAPDRL-AANGFGQYQPVAEGDSESARAQNRRIELKLTE 597 Query: 341 R 341 + Sbjct: 598 K 598 >gi|53720708|ref|YP_109694.1| putative outer membrane protein [Burkholderia pseudomallei K96243] gi|52211122|emb|CAH37110.1| putative outer membrane protein [Burkholderia pseudomallei K96243] Length = 310 Score = 96.6 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 83/267 (31%), Gaps = 16/267 (5%) Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 G+ + P + S +T + + + Q Sbjct: 44 GVPVKSVPLAAPVTAAPVAATAGAGATVSSPPPANATPGQVVAGGKVADEATKAAVLQRL 103 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 ++ + +T S N ++ K ++ + + Sbjct: 104 RDTYGAANVVDQIEIGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNE 163 Query: 202 TLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTPMFDKSSSIPLPETIVVL 252 +A ++ + T + G+ +S +Q T F+ S+ P+ +L Sbjct: 164 AQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGRAIL 223 Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++ LA + I GHTD N LS RA + L+ G++ +++ Sbjct: 224 DQMAGALAKMSNRTVEIIGHTDN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT 280 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDI 336 +G + +D + NRRI+ Sbjct: 281 -TGVGPDQPIAPNDSADGRARNRRIEF 306 >gi|209695194|ref|YP_002263123.1| outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] gi|208009146|emb|CAQ79386.1| outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] Length = 355 Score = 96.6 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 49/123 (39%), Gaps = 9/123 (7%) Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDAS 275 F I + +FD +S+ +L L + +E SI GHTDA Sbjct: 218 FSCPIPNERQIITAYVDDELFDSNSTTITK--PELLDPFIARLHYYSESTLSIIGHTDAI 275 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333 N LS RA S + +KSG+S +RIS G ++ N NRR Sbjct: 276 ---GSEAYNQSLSEKRAESVAKYFIKSGISNNRIST-QGRGEKDPIAPNNTQNGRYLNRR 331 Query: 334 IDI 336 +++ Sbjct: 332 VEL 334 >gi|186471751|ref|YP_001863069.1| DotU family type IV/VI secretion system protein [Burkholderia phymatum STM815] gi|184198060|gb|ACC76023.1| type IV / VI secretion system protein, DotU family [Burkholderia phymatum STM815] Length = 429 Score = 96.6 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 7/136 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + ++ R MF ++ KI + Sbjct: 296 LKDEIAAGTVSVDEDAKHSAVTF---RGDSMFPPGGVAVNTSMGPLIAKIAAEIVKVPGK 352 Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ G+TD P + N LS +RA Q+L GV R+ + G + Sbjct: 353 VTVLGYTDNLPIHSHAFASNDALSAERATQVLQMLQADGVPASRLEAM-GKGEADPVADN 411 Query: 325 DP--MNSANRRIDILV 338 + NRR++I V Sbjct: 412 STPQGRAQNRRVEIHV 427 >gi|325105621|ref|YP_004275275.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] gi|324974469|gb|ADY53453.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] Length = 230 Score = 96.6 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 7/118 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286 I+ + +FD + + + + L + + GHTDA N + Sbjct: 106 IVKFDSGLLFDFNKATLSATAKQNIDNLAASLNKYPDTDILVVGHTDAI---GTDAVNNK 162 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LSL+RA S + GVS R+ SG ++D + NRR++I++ + Sbjct: 163 LSLERANSVVSYAISKGVSSGRLKS-SGKGKTEPIASNDTDAGRAQNRRVEIVIVANE 219 >gi|229917739|ref|YP_002886385.1| OmpA/MotB domain protein [Exiguobacterium sp. AT1b] gi|229469168|gb|ACQ70940.1| OmpA/MotB domain protein [Exiguobacterium sp. AT1b] Length = 259 Score = 96.6 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 9/207 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 S + L + S+ + + N + K A R L L + Sbjct: 37 ASSNIDQTKLEKMSQSFNQVFSGGVSVFQASTASNSDIERTDKTNTTANPRTYELAQLDE 96 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + + +G++++I D+ +F+ + + V Q I + Sbjct: 97 LKEDVNKYIKKNGLESQIKATINSSGLVLTIQDR---ALFNLGEATLDADARAVAQNISQ 153 Query: 258 VL-AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS-AYQVLMKSGVSEDRISKISG 314 +L I + GHTD P NW LS RA + +L ++ + + S Sbjct: 154 ILEKAGKREIVVSGHTDNIPINTARFPSNWELSSARATAFMRGLLANDALNPAQFTLAS- 212 Query: 315 FAHHRLKIASDPMNSA--NRRIDILVE 339 + + +D NRR+++L++ Sbjct: 213 YGEFKPIATNDTEEGRSKNRRVEVLIK 239 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 38/86 (44%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K+K D + W I YAD +T+L+A F+V++ + D + + Q FN Sbjct: 1 MKRKKKHDHEEHIPEGWLIPYADLLTLLLALFIVLFASSNIDQTKLEKMSQSFNQVFSGG 60 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSI 102 ++ + + ER+ + + Sbjct: 61 VSVFQASTASNSDIERTDKTNTTANP 86 >gi|86606634|ref|YP_475397.1| OmpA family protein [Synechococcus sp. JA-3-3Ab] gi|86555176|gb|ABD00134.1| OmpA family protein [Synechococcus sp. JA-3-3Ab] Length = 273 Score = 96.6 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 73/248 (29%), Gaps = 12/248 (4%) Query: 96 NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155 + + + + + ++ +S S + ++ + Sbjct: 31 GMVLPQPLQTQPLPVPQPQANTPPLLPTLSPPQASLPAVSPDADSPKGNPNHGGSTDLER 90 Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 ++ + + L + A + R + + ++ A Sbjct: 91 EIRELRQQAIQLLIRVEELESRLQRLSSPAAAPEPRRESATT---AEIAPEGASVPAPTA 147 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 T + I +FD + PE +L ++ + L + + GHTD Sbjct: 148 TPTPTSFQVGTRTISLPGDLLFDFDKAEIRPEAASLLAEVAKSLREMPGARVQVNGHTDN 207 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK--ISGFAHHRLKIASDPM--NSA 330 N LSL RA + L + ED SGF +D Sbjct: 208 I---GSLNYNLDLSLRRANAVKDYLANL-LPEDHPISWTTSGFGPTLPVADNDTEEGRQR 263 Query: 331 NRRIDILV 338 NRR+D+++ Sbjct: 264 NRRVDLII 271 >gi|116327359|ref|YP_797079.1| endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120103|gb|ABJ78146.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 224 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 78/192 (40%), Gaps = 7/192 (3%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 K + L KS + K N+ LS+ + ++ + ++ ++ + Sbjct: 22 KYESLLKSYEESKLENQRILEEKVNLSRSLNELKRIQEESELRIQEYRRLIATFRSLIDA 81 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 + + +++ + +F S+ I ++++ +LA I GH Sbjct: 82 GKLKIKIIDGRMVVVLSSD---ILFPVGSAFLSSAGIASIREVTTLLASLGGKRFQIEGH 138 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNS 329 TD +P NW L+ RA + ++K+G+ E+RIS S R + + S Sbjct: 139 TDDTPTGIKGYTNWELASSRALNVLHTMIKAGMPEERISAAS-MGASRPALPNTSPENRS 197 Query: 330 ANRRIDILVEDR 341 ANRRI+I++ Sbjct: 198 ANRRIEIVIVPD 209 >gi|84515980|ref|ZP_01003341.1| OmpA family protein [Loktanella vestfoldensis SKA53] gi|84510422|gb|EAQ06878.1| OmpA family protein [Loktanella vestfoldensis SKA53] Length = 218 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 10/139 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + + V T +++ + +F +S+ ++ L + L + Sbjct: 85 AEELRRALRNDVGVSNNGTNLVVVLSQDL---LFATNSTQIGAQSQNDLMIVARSLTNYP 141 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I++ GHTD A N LS RA S VL GVS R+ I G ++ Sbjct: 142 DSTINVIGHTDNV---GSASFNQDLSERRAQSVAGVLRSGGVSPGRVRSI-GAGLYQPIA 197 Query: 323 ASDPMNSA--NRRIDILVE 339 ++ NRR++I++ Sbjct: 198 SNATAEGRQLNRRVEIIIT 216 >gi|70733365|ref|YP_263140.1| hypothetical protein PFL_6082 [Pseudomonas fluorescens Pf-5] gi|68347664|gb|AAY95270.1| OmpA family protein [Pseudomonas fluorescens Pf-5] Length = 441 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L D V E +++I +F +S+ L + ++ +I + + Sbjct: 304 LAEDIKAGRVAVEDAVDRSVVTIRGDE---LFASASASILDDYQPLMLRIADAVRKVKGQ 360 Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + I GH+D P NW+LS RA S Q+L +R S G + + Sbjct: 361 VRITGHSDNRPIATLRFPSNWKLSQARAESVLQILAAKTGQPERFSA-EGRSDTEPLATN 419 Query: 325 DPM--NSANRRIDILVED 340 + NRR++I V Sbjct: 420 ATAEGRARNRRVEISVLA 437 >gi|327405084|ref|YP_004345922.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327320592|gb|AEA45084.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 681 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 83/234 (35%), Gaps = 14/234 (5%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 S+ Q+ + +++ + + K L + K + +S +K E + Sbjct: 451 SSQQQGNWDIYGFDLYEEARPKAVTIIKGDLKDPTGKPIENAIIEVAYESSDKVEQVRVN 510 Query: 177 PLSKEKILAMKRKKRLQ-------DLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + + +K +K D A S ++ V + + Sbjct: 511 GNDGKYAVVVKTEKPQDIMVSVKKDGAAFDSKLITKEEIVKKENRVNNNLEVKELKVGEA 570 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 N ++D +S ++ +L++ L + I ++GHTD+ N LS Sbjct: 571 YTINDILYDYNSDFLSTKSKFILREFARFLKSNPTVKIMVQGHTDSD---GDDAKNLDLS 627 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 RA L G+ DR+ G+ + K+ +D + NRR D L++ Sbjct: 628 DRRAKGVKAYLQSQGIESDRLEA-KGYGETKPKVENDTPENKAKNRRTDFLIQG 680 >gi|255319913|ref|ZP_05361114.1| inner membrane lipoprotein YiaD [Acinetobacter radioresistens SK82] gi|262379192|ref|ZP_06072348.1| type VI secretion system OmpA/MotB [Acinetobacter radioresistens SH164] gi|255303046|gb|EET82262.1| inner membrane lipoprotein YiaD [Acinetobacter radioresistens SK82] gi|262298649|gb|EEY86562.1| type VI secretion system OmpA/MotB [Acinetobacter radioresistens SH164] Length = 209 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 51/148 (34%), Gaps = 9/148 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV G + I+ FD + S P L K+ + Sbjct: 68 YLDNKEKKLRQQMAGTGVEVNRNPDGSVGLIM--PGNITFDTNKSTIKPNFYTTLNKVAQ 125 Query: 258 VL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + I + G+TD++ N LS RA + L GV RI+ G Sbjct: 126 TLTEDNKSAILVTGYTDST---GNDSINIPLSQARAQAVANYLAGQGVPRTRINA-QGLG 181 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDRQ 342 ++ NRR++I + Q Sbjct: 182 ASNPIASNATAEGREQNRRVEISIYATQ 209 >gi|218676173|ref|YP_002394992.1| outer membrane protein OmpA [Vibrio splendidus LGP32] gi|218324441|emb|CAV25864.1| outer membrane protein OmpA [Vibrio splendidus LGP32] Length = 353 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288 + + MF+ +S+ E L + EVL + ++ GHTD++ A N +S Sbjct: 226 ESFSQGMFETNSTELSSEGKTALIPLVEVLQAHPQSSVNVVGHTDST---GAAEYNMMIS 282 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA + + + G++ DRI SG ++ + NRR+D + Sbjct: 283 KKRAAAVAAYIEEQGIAADRI-AASGEGEENPVASNATAEGRAQNRRVDATI 333 >gi|158424220|ref|YP_001525512.1| OmpA family protein [Azorhizobium caulinodans ORS 571] gi|158331109|dbj|BAF88594.1| OmpA family protein [Azorhizobium caulinodans ORS 571] Length = 494 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 8/137 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + K + ++I + +F +S+ P V+ K+ LA Sbjct: 361 LEPEQQAKLITVFGRGNSVVIQTQQE----LFASASTTLRPPYPEVIAKVAAALAKFKGP 416 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ G+TD P R DN LS RA + Q L RI+ + G ++ Sbjct: 417 VNVLGYTDNVPIRTATFPDNLALSTARARAVGQALAAGLGGNARITTV-GKGDADPVASN 475 Query: 325 DP--MNSANRRIDILVE 339 D NRR++I++ Sbjct: 476 DTPDGRQKNRRVEIVLT 492 >gi|91212188|ref|YP_542174.1| hypothetical protein UTI89_C3194 [Escherichia coli UTI89] gi|218559806|ref|YP_002392719.1| hypothetical protein ECS88_3087 [Escherichia coli S88] gi|91073762|gb|ABE08643.1| hypothetical protein UTI89_C3194 [Escherichia coli UTI89] gi|218366575|emb|CAR04328.1| conserved hypothetical protein; putative membrane protein [Escherichia coli S88] gi|294493880|gb|ADE92636.1| OmpA domain protein [Escherichia coli IHE3034] gi|307625612|gb|ADN69916.1| hypothetical protein UM146_02475 [Escherichia coli UM146] gi|315289326|gb|EFU48721.1| OmpA family protein [Escherichia coli MS 110-3] gi|323951748|gb|EGB47623.1| OmpA family protein [Escherichia coli H252] gi|323957271|gb|EGB52994.1| OmpA family protein [Escherichia coli H263] Length = 550 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282 + + + + +FD + + VL + + + G+TDA+ + Sbjct: 425 LQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 481 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 N +LSL RA + ++++ + G + +D + NRR++I + Sbjct: 482 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 541 Query: 341 R 341 R Sbjct: 542 R 542 >gi|117625045|ref|YP_854033.1| putative outer membrane protein [Escherichia coli APEC O1] gi|115514169|gb|ABJ02244.1| putative outer membrane protein [Escherichia coli APEC O1] Length = 537 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282 + + + + +FD + + VL + + + G+TDA+ + Sbjct: 412 LQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 468 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 N +LSL RA + ++++ + G + +D + NRR++I + Sbjct: 469 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 528 Query: 341 R 341 R Sbjct: 529 R 529 >gi|45658882|ref|YP_002968.1| flagellar motor protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602127|gb|AAS71605.1| flagellar motor protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 223 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 7/192 (3%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 K + L KS + K N+ LS+ + ++ ++ + +S Sbjct: 21 KYESLLKSYEESKLENQRILGEKGDLSRSLEELKRIQEESDRRIQEYKALMSTFRFLIDA 80 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 + + +++ + +F S+ P ++++ +LA I GH Sbjct: 81 GKLKIKIIDGRMVVVLSSD---ILFPIGSAHLSPAGTAAIKEVTTLLASLEGKRFQIEGH 137 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 TD +P NW L+ RA + ++K+G+ E RIS S R + + + Sbjct: 138 TDDTPTGIKGYTNWELASSRALNVLHTMIKAGMPEVRISAAS-MGASRPALPNTSPENRS 196 Query: 331 -NRRIDILVEDR 341 NRRI+I++ Sbjct: 197 SNRRIEIVIVPD 208 >gi|254473994|ref|ZP_05087387.1| OmpA family protein [Pseudovibrio sp. JE062] gi|211956883|gb|EEA92090.1| OmpA family protein [Pseudovibrio sp. JE062] Length = 220 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L GV I++++ + F + + VL + Sbjct: 79 NYMDRQEAQLRQQLQSSGVSVTRNGNQIVLNMPNDVT---FAVGQATLSSRAMQVLNSVA 135 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 V + ++ GHTD + A+ N +LS RA S L GV+ RIS G+ Sbjct: 136 LVAKEFPQTRLNVYGHTDNT---GSAQFNLQLSQRRADSVSNYLFNQGVNGARISAA-GY 191 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 ++ + NRR++I++ Sbjct: 192 GLTSPIASNATEAGRAQNRRVEIIL 216 >gi|114799158|ref|YP_761149.1| OmpA family protein [Hyphomonas neptunium ATCC 15444] gi|114739332|gb|ABI77457.1| OmpA family protein [Hyphomonas neptunium ATCC 15444] Length = 297 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 70/207 (33%), Gaps = 9/207 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 Q E + ++++ + + ++ E + + + + Sbjct: 97 GLQREANTQIESLNTQRAEVVSQARMREVASAEAATTVAENRADRSDAVAAGAVADSAAS 156 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + A + +E T+T + +++I + F S++ L + Sbjct: 157 ETARLAAEARAAALTAELADYEQTKTDLGVTLILRDLQ--FASGSALLTSGAQGRLAPLA 214 Query: 257 EVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L I I GHTD+ N LS RA S L +GV RI+ I G Sbjct: 215 SYLSKQPESRIQIAGHTDSQ---GAEAYNQDLSARRAASVGTYLASTGVDSGRINTI-GL 270 Query: 316 AHHRLKIASDPMNSA--NRRIDILVED 340 ++D NRR++I + D Sbjct: 271 GESTPLSSNDTAAGRAINRRVEITILD 297 >gi|78047093|ref|YP_363268.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294626580|ref|ZP_06705178.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665669|ref|ZP_06730945.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|78035523|emb|CAJ23169.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292599147|gb|EFF43286.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292604564|gb|EFF47939.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 241 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 10/204 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q+ ++ + + ++ L + + + + A + + Sbjct: 30 QRDQYGEQTQQQNRTGRNALIGTAIGVAAGLLTGDSATERRQHAMVGAGIGALSGAAIGQ 89 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 L G+ + I +++ D FD S P+ L + Sbjct: 90 YQDRQERALRERTANTGIEVQRQGDNISLNLPDGIT---FDFGKSALKPQFYTALNGVAS 146 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + ++ + GHTD+ N RLS +RA + Q L GV +R+ + G Sbjct: 147 TLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERASAVAQYLTAQGVQRERMETM-GAG 202 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 + + NRR++I + Sbjct: 203 KRYPIADNTTDAGRAKNRRVEIRL 226 >gi|319778087|ref|YP_004134517.1| type IV / vi secretion system protein, dotu family [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171806|gb|ADV15343.1| type IV / VI secretion system protein, DotU family [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 498 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 71/201 (35%), Gaps = 17/201 (8%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 S D+ G+ L + + +I + L +K A + I + Sbjct: 309 SNEGDAAAGELLALNPSIPVAIERASVAPLVEPAKVAPPAANAQ---------IDRIRAA 359 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L D G+ T I++ I N +F + PE + I L H Sbjct: 360 LAKDVEGGGLAIGTKGDFIVVEIN---NLLLFQSGRAETKPEFQPIAADIAAALEHEPGP 416 Query: 266 ISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I I GHTD R + + N+ LSL RA + ++ R+ + G Sbjct: 417 IRIVGHTDNVKPRRSSAFKSNFDLSLARAKAVEALMAAKFSDPSRL-TVDGKGEDEPIAE 475 Query: 324 SDP--MNSANRRIDILVEDRQ 342 + + NRR+D+++ + Sbjct: 476 NATPEGRARNRRVDVMIPREE 496 >gi|307822441|ref|ZP_07652673.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] gi|307737007|gb|EFO07852.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] Length = 363 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 9/105 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F +S+ +L + L I ++GHT + + N +LS RA S Sbjct: 260 FKYNSAELTLNAKEILDGVAGNLVSYPQKNDIEVQGHTSSE---GTNKYNLKLSQRRAQS 316 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L GV +R++ G+ + + + NRR++++ Sbjct: 317 VVDYLKLKGV-TNRLTA-KGYGETQPIADNSTEAGKAENRRVELI 359 >gi|256419485|ref|YP_003120138.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] gi|256034393|gb|ACU57937.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] Length = 225 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 56/152 (36%), Gaps = 19/152 (12%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 K++ A++I + + + + +G+ + +F S + Sbjct: 74 KKMDKQAQEIKTEVPNATVERVGEGINVTF------------ASGVLFGFDKSDLTGQAQ 121 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 ++ + +L + + + GHTD + N LS RA + L GV+ R Sbjct: 122 QNIKDLATILNKYPDTYVRVEGHTDTT---GTDSYNMGLSERRANAVATYLKSQGVAASR 178 Query: 309 ISKISGFAHHRLKIASDPMN--SANRRIDILV 338 + + + + ++ + NRR++ + Sbjct: 179 VQTF-WYGARQPVVPNNSDANKAKNRRVEFSI 209 >gi|114765948|ref|ZP_01444962.1| hypothetical protein 1100011001347_R2601_22192 [Pelagibaca bermudensis HTCC2601] gi|114541762|gb|EAU44800.1| hypothetical protein R2601_22192 [Roseovarius sp. HTCC2601] Length = 360 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 7/123 (5%) Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275 F+ I+ + F S+ E++ +L+ + +V++ + I I GHTD+ Sbjct: 238 FDREACIGRFEILSRAGNIYFGAGSARLSAESVPLLENLYDVVSRCPDLKIEIAGHTDSD 297 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 N RLS RA S + L G+ E R+ + G+ + + + + NRR Sbjct: 298 ---GSDAANLRLSELRAASVKEYLQGKGIPESRML-VVGYGEAQPLLENTSAANKARNRR 353 Query: 334 IDI 336 I+ Sbjct: 354 IEF 356 >gi|89073281|ref|ZP_01159811.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34] gi|89050991|gb|EAR56455.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34] Length = 326 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 8/126 (6%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 ++++ + R T F SS + L + L I + GHTD+ Sbjct: 190 ETINVNQVTIVTLEELRLTVPFAFDSSTITTDDAAKLAPFEQRLKEQDTAKIYVVGHTDS 249 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--N 331 N LS RA + L + + RI G ++ + N Sbjct: 250 R---GSESYNQTLSEKRAEAVADTLRQHLNLDSSRIIA-QGRGESDPVASNQTEDGRSQN 305 Query: 332 RRIDIL 337 RR+DI+ Sbjct: 306 RRVDII 311 >gi|269963902|ref|ZP_06178214.1| putative lipoprotein [Vibrio harveyi 1DA3] gi|269831389|gb|EEZ85536.1| putative lipoprotein [Vibrio harveyi 1DA3] Length = 219 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 60/208 (28%), Gaps = 9/208 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +Q+ +S L + + I A Sbjct: 15 QATQRQNATTGEYETNSTTQGALIGAIAGAAIGLATGDDAKERRKHALIGAAAGGATGAG 74 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + L + GV E L ++ N F SS L+ Sbjct: 75 VGYYFDQQEAELRRALLNSGVQVERVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRG 132 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + + G+TD++ N LS RA S Q L+ V+ R Sbjct: 133 VARILVEYPDTSLVIDGYTDST---GSDSYNQTLSERRAESVRQYLVSQNVAPGRAIA-R 188 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339 G+ ++ NRR++I + Sbjct: 189 GYGERNPICSNQTSEGRACNRRVEIQIL 216 >gi|261252822|ref|ZP_05945395.1| outer membrane protein [Vibrio orientalis CIP 102891] gi|260936213|gb|EEX92202.1| outer membrane protein [Vibrio orientalis CIP 102891] Length = 222 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 52/146 (35%), Gaps = 12/146 (8%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + D+ V+ + + + N F SS P L+ + Sbjct: 83 DQQEAALRKELLDSGVQVERVGENQLMLRLE-----NGIGFQSSSYALDPSIHNTLRGVA 137 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + + GHTD++ N LS RA S L+ GV+ R G Sbjct: 138 RILVEYPDTSLVIDGHTDST---GSDTTNQVLSERRAESVRSYLVSQGVAAGRAVA-RGN 193 Query: 316 AHHRLKIASD--PMNSANRRIDILVE 339 +D + NRR++I + Sbjct: 194 GERYPICTNDTTTGRACNRRVEIQIL 219 >gi|209809526|ref|YP_002265064.1| outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] gi|208011088|emb|CAQ81507.1| outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] Length = 222 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 50/143 (34%), Gaps = 9/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S L + GV E L I+D N F SS L + +L Sbjct: 83 DSQEQALRDELKSSGVQVERVGDNELKLIMD--NGVGFQSSSYQLDASIYNTLNGVARIL 140 Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I GHTD+ N LS RA S L+K V+ R++ G+ Sbjct: 141 VEYPDTALQIDGHTDS---SGNDTKNQTLSEQRAESVRTYLIKQKVAAGRVNA-RGYGER 196 Query: 319 RLKIASDP--MNSANRRIDILVE 339 + + NRR++I + Sbjct: 197 YPVFDNSTSQGRACNRRVEITIL 219 >gi|295095609|emb|CBK84699.1| type IV / VI secretion system protein, DotU family [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 412 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 69/179 (38%), Gaps = 8/179 (4%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + L + + ++ ++ + L ++ L + V + Sbjct: 222 NWRLGDNTSPVLAKIYQSQLPETTIQQPARQLPAVLN-LRGFLKPEIDAGLVAVKDEADR 280 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR- 282 ++ + + +F +S++ V+ +I + + + + I + G++D P R+ Sbjct: 281 SVVIL---KGDGLFASASTVVRDRYEPVIDRIAQAMNNVSGKILVVGYSDNVPIRSARFA 337 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 N+ LSL+RA S + L S +R+ G + + NRR++I + Sbjct: 338 SNYELSLERARSVQKQLQGSLSQPERVKA-EGRGEINPVAPNTTPENRARNRRVEITLL 395 >gi|307578587|gb|ADN62556.1| OmpA family protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 240 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 L G+ + I +++ D FD S+ P+ L+ + Sbjct: 89 NYQDRQERALRERTANTGIDVKRDGDNITLNLPDGIT---FDFGKSMLKPQFYGALKNVA 145 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L + +I + G+TD+ N RLS DRA + L GV +R+ +ISG Sbjct: 146 STLREYNQTMIEVVGYTDSI---GSDVVNQRLSEDRAGAVASYLAAQGVQRERM-EISGM 201 Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338 + NRR++I + Sbjct: 202 GKRYPIADNSTEAGRSKNRRVEIHL 226 >gi|217423043|ref|ZP_03454545.1| OmpA family protein [Burkholderia pseudomallei 576] gi|254182960|ref|ZP_04889553.1| OmpA family protein [Burkholderia pseudomallei 1655] gi|254264206|ref|ZP_04955071.1| SciP protein [Burkholderia pseudomallei 1710a] gi|254299754|ref|ZP_04967203.1| SciP protein [Burkholderia pseudomallei 406e] gi|157809358|gb|EDO86528.1| SciP protein [Burkholderia pseudomallei 406e] gi|184213494|gb|EDU10537.1| OmpA family protein [Burkholderia pseudomallei 1655] gi|217393951|gb|EEC33971.1| OmpA family protein [Burkholderia pseudomallei 576] gi|254215208|gb|EET04593.1| SciP protein [Burkholderia pseudomallei 1710a] Length = 439 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 75/229 (32%), Gaps = 12/229 (5%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +Q ++ + + L +S S + Sbjct: 211 EQIRQRLWTLITGARDAIQPELSLRWRGAEPGRLPLLRSVPAWASGALVFLLLFGLFAFY 270 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233 + + + L+ I+ + +L + L+++ + R Sbjct: 271 QYRLLTERNALEARILAIAKDEPAPPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRG 330 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292 MF S LPE VL K+ +A +++ GH+D P R +N LS RA Sbjct: 331 DSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 390 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 Q+L++ G DRI G + + S NRR++I V Sbjct: 391 AYVAQILVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 438 >gi|157889016|dbj|BAF80962.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 7/104 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 F PE +Q++G+VL + + +I GHTD++ N +LSL+RA Sbjct: 222 GYFGFDQISINPEFAQKIQEVGKVLEENPQYYTILEGHTDST---GSKTYNQKLSLERAK 278 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + + L KSGV +++I G+ + K ++D + NRR++ Sbjct: 279 AVAKELEKSGVVKEKI-ATKGYGFDKPKASNDTKEGRAQNRRVE 321 >gi|170734971|ref|YP_001774085.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169821009|gb|ACA95590.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3] Length = 220 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F S++ P L + A + + G+TDA+ N LS R Sbjct: 114 GDAYFATDSAVLTPAATAALDTLLNQQADRHFARVEVDGYTDAT---GSDAHNQALSKRR 170 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 A + L + G+ D +G ++D + NRR++I ++ Sbjct: 171 ADAVAGYLREHGLKADSF-AAAGHGEANPAASNDTAEGRARNRRVEISLQK 220 >gi|332669308|ref|YP_004452316.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484] gi|332338346|gb|AEE44929.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484] Length = 377 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 13/111 (11%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S + L + +VLA + GHTD+ + N LS RA + Sbjct: 271 VLFDFGSHAVRADARATLDAVAQVLADVP-AARVEGHTDSV---SSDELNQALSERRADA 326 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD-------PMNSANRRIDILV 338 L + GVS + GF R ++ NRR++I+V Sbjct: 327 VATALGERGVSAA--LETQGFGESRPVAPNEVDGVDNPAGRQLNRRVEIVV 375 >gi|296159295|ref|ZP_06842121.1| type IV / VI secretion system protein, DotU family [Burkholderia sp. Ch1-1] gi|295890554|gb|EFG70346.1| type IV / VI secretion system protein, DotU family [Burkholderia sp. Ch1-1] Length = 443 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 7/163 (4%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 S E + R+ A + L + V + ++ R MF Sbjct: 283 SAEVRKQIADIGRMTPPATRALHLKELLKNEIAAGTVSVDEDAHHSSVTF---RGDSMFP 339 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297 ++ ++ KI +A + +S+ G+TD P ++ N LS +RA Q Sbjct: 340 PGAAAVKTSMTPLITKIAGEIAKVSGKVSVLGYTDNVPIKSRQFASNAALSEERATQIMQ 399 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 +L +GV R+ + G + + NRR++I V Sbjct: 400 MLQTAGVPAVRLEAV-GRGDADPVGDNTTVQGRAQNRRVEITV 441 >gi|326319363|ref|YP_004237035.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376199|gb|ADX48468.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 217 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 9/119 (7%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D + F + S P VL + E L ++ + I G+TD++ N LS Sbjct: 103 DIPSDISFATNRSDIQPNFAPVLDRFAEGLRNNPNAEVRIVGYTDST---GNDSINNPLS 159 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV--EDRQG 343 LDRA S L GVS RI ++ G +D + NRR++I V RQG Sbjct: 160 LDRATSTRNYLTSRGVSGARI-QVEGRGAREPVATNDTAEGRARNRRVEIYVGERPRQG 217 >gi|284035694|ref|YP_003385624.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283814987|gb|ADB36825.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 236 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 10/138 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + E GI +S+ +FD S PET L + + L Sbjct: 89 QAEEIKRQMPNAQVERVGEGIKVSLGSD---ILFDVDSYALKPETKQQLIEFAKSLNKYE 145 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I GH DA+ N LS RA + L GV R+ +I G+ + Sbjct: 146 DTDVRIEGHADAT---GSDSHNLELSKQRAKAVGSFLESQGVKTSRVDEI-GYGEAQPVA 201 Query: 323 ASDPMNSA--NRRIDILV 338 + NRR+D+ V Sbjct: 202 DNSTEAGRRKNRRVDVAV 219 >gi|309796906|ref|ZP_07691307.1| OmpA family protein [Escherichia coli MS 145-7] gi|308119434|gb|EFO56696.1| OmpA family protein [Escherichia coli MS 145-7] Length = 550 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + + + V + + + +FD + + VL Sbjct: 399 EQIRQPVLRAIRDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 453 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + + G+TDA+ + N +LSL RA + ++++ Sbjct: 454 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + G + +D + NRR++I + R Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542 >gi|300715167|ref|YP_003739970.1| OmpA family protein [Erwinia billingiae Eb661] gi|299061003|emb|CAX58110.1| OmpA family protein [Erwinia billingiae Eb661] Length = 412 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 7/137 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + ++++ + +F +S+ VL +I + + + Sbjct: 263 LRPEIEQGLVAVKDEADQSVVTL---KGDGLFTSASTSVRGRYEEVLDRIAQAMNNVNGR 319 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I + G++D P R+ N+ LSL RA S + L + R+ G + + Sbjct: 320 ILVIGYSDNVPIRSARFASNYELSLARAQSVQERLQQHLSQPQRVKA-EGRGESNPLVPN 378 Query: 325 DPM--NSANRRIDILVE 339 + NRR+DI + Sbjct: 379 TTAENRARNRRVDITLL 395 >gi|215433411|gb|ACJ66671.1| OmpA domain protein [Myxococcus fulvus HW-1] Length = 615 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 80/258 (31%), Gaps = 9/258 (3%) Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 P + + Q D ++ +D + Q + Sbjct: 354 PGDVARQGCSAQDTDGDGIEDMLDACPVE-HGPAARQGCPIPDQDGDEVPDEIDSCPTDP 412 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 ++ + TD + N ++ E+ + + + S ++ Sbjct: 413 GPADNRGCPVRDTDGDGIDNDKDECPNEAGPVERNGCPESDTDKDGVPNRADSCVNEPGD 472 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--I 266 + L I F+ + + + +L + V+ E+ + Sbjct: 473 AKNLGCPLHVLPLVEIRPDRFVVMGKVFFEPTQARIQKRSFELLDWVARVIREHPEIPLV 532 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + HTD N RLS RA + Q L+ ++ +R+ + G+ R ++ Sbjct: 533 VVGAHTDDR---GFPDANRRLSQARAEAVRQYLIGRDIAPERLKAL-GYGQERPIDSNAT 588 Query: 327 MNSA--NRRIDILVEDRQ 342 N NRR++ L+ D Q Sbjct: 589 SNGRENNRRVEFLLADPQ 606 >gi|218516717|ref|ZP_03513557.1| flagellar motor protein MotB [Rhizobium etli 8C-3] Length = 89 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 32/81 (39%), Positives = 50/81 (61%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + + ++ II+K+ D + G+WKI YADFMT +MAFFLVMW++NA +++ Sbjct: 1 MSEGENHHHGRNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60 Query: 61 TKKAIEQYFNPFGKNLMTASK 81 TK A+ YFNP ++ Sbjct: 61 TKAAVATYFNPIKLADEKPTE 81 >gi|119478742|ref|ZP_01618600.1| Flagellar motor protein [marine gamma proteobacterium HTCC2143] gi|119448371|gb|EAW29625.1| Flagellar motor protein [marine gamma proteobacterium HTCC2143] Length = 130 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 3/89 (3%) Query: 258 VLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 +LA ISI+GHTD +P + R NW LS RA S L + + R ++SGFA Sbjct: 1 MLATKKGAISIQGHTDNNPIKTTRFRSNWELSTSRAVSVAHALFEGNILNPRRVEVSGFA 60 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQG 343 R ++D + NRR++I+++ G Sbjct: 61 ETRPLSSNDTVEGRAKNRRVEIVIQQGLG 89 >gi|108763188|ref|YP_632960.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622] gi|108467068|gb|ABF92253.1| OmpA domain protein [Myxococcus xanthus DK 1622] Length = 615 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 83/277 (29%), Gaps = 10/277 (3%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + D++ P + S + D+ G + R I Sbjct: 334 PDMDEDGDGVRNADDKCPLVPGDVARQGCSAQDTDGDGIEDMLDGCPLEHGPAARQGCPI 393 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM--KRK 189 + + + + C D + + P + + Sbjct: 394 PDQDGDEVPDEIDSCPSDPGPADNRGCPVRDTDGDGIDNDKDECPNEAGPIERNGCPESD 453 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + S ++ + L I + F+ + + + Sbjct: 454 TDKDGVPNRADSCVNEPGDAKNLGCPLHILPLVEIRPDRLVVMGKVFFEPTQARIQKRSY 513 Query: 250 VVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + V+ E+ + + HTD DN RLS RA + Q L+ ++ + Sbjct: 514 ELLDWVARVIREHPEIPLVVVGAHTDDR---GFPDDNRRLSQGRAEAVRQYLIGRDIAPE 570 Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 R+ + G+ R ++ N NRR++ L+ D Q Sbjct: 571 RLKAL-GYGQERPIDSNATSNGRENNRRVEFLLADPQ 606 >gi|86144391|ref|ZP_01062723.1| Outer membrane protein [Vibrio sp. MED222] gi|85837290|gb|EAQ55402.1| Outer membrane protein [Vibrio sp. MED222] Length = 353 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288 + + MF+ +S+ E L + EVL + ++ GHTD++ A N +S Sbjct: 226 ESFSQGMFETNSTELSSEGKSALMPLVEVLQAHPQSSVNVVGHTDST---GAAEYNMMIS 282 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA + + + G+ DRI+ SG ++ + NRR+D + Sbjct: 283 KKRAAAVAAYIEEQGIEADRITA-SGEGEENPVASNATAEGRAQNRRVDATI 333 >gi|332667773|ref|YP_004450561.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332336587|gb|AEE53688.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 603 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+I LP + +L ++ ++ + I+GHTD+ N LS RA S Sbjct: 499 FKTGSAILLPSSKKILDQVAALMNRYPAYKLDIQGHTDSQ---GKEDFNLSLSKKRAKSC 555 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 Y L+ + RI GF + ++ NRR++ +++ +Q Sbjct: 556 YDYLLLRSIDAKRIEH-EGFGETKPIASNKTPQGRVQNRRVEFVLDVKQ 603 >gi|193076988|gb|ABO11733.2| putative outer membrane lipoprotein [Acinetobacter baumannii ATCC 17978] Length = 255 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++ +L ++ L I GHTD+ A N +LS DRA + Sbjct: 154 FESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDANKNLKLSQDRALAV 210 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ + D +S G + + NRRI+ V Sbjct: 211 KNYLISKNIPADHLST-EGLGSSKPVADNTSAEGRKKNRRIEFTVL 255 >gi|126444974|ref|YP_001061168.1| hypothetical protein BURPS668_A0162 [Burkholderia pseudomallei 668] gi|126224465|gb|ABN87970.1| SciP protein [Burkholderia pseudomallei 668] Length = 433 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 75/229 (32%), Gaps = 12/229 (5%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +Q ++ + + L +S S + Sbjct: 205 EQIRQRLWTLITGARDAIQPELSLRWRGAEPGRLPLLRSVPAWASGALVFLLLFGLFAFY 264 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233 + + + L+ I+ + +L + L+++ + R Sbjct: 265 QYRLLTERNALEARILAIAKEEPATPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRG 324 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292 MF S LPE VL K+ +A +++ GH+D P R +N LS RA Sbjct: 325 DAMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 384 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 Q+L++ G DRI G + + S NRR++I V Sbjct: 385 AYVAQILVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 432 >gi|238028341|ref|YP_002912572.1| OmpA family protein [Burkholderia glumae BGR1] gi|237877535|gb|ACR29868.1| OmpA family protein [Burkholderia glumae BGR1] Length = 219 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F P +L ++ L + ++ S+ G+TD++ A N LS + Sbjct: 103 PSSVTFATDQYAITPAFAPLLNELATSLNQNPQITASVVGYTDST---GSAAHNLTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA S L++ GV+ R+S G + + NRR++I + Sbjct: 160 RAQSVVTALVQRGVAGSRLSA-QGMGASNPVADNATDAGRAQNRRVEIYLRA 210 >gi|330817987|ref|YP_004361692.1| OmpA family protein [Burkholderia gladioli BSR3] gi|327370380|gb|AEA61736.1| OmpA family protein [Burkholderia gladioli BSR3] Length = 216 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F P +L + L + ++ S+ G+TD++ A N LS + Sbjct: 103 PSSVTFATDQYAITPAFAPLLNDLASTLNQNPQITASVVGYTDST---GSAAHNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L++ GV+ R+ G + + NRR++I + Q Sbjct: 160 RAQSVVTALVQRGVAGGRLGA-QGMGASNPVADNATEAGRAQNRRVEIYLRAPQ 212 >gi|253991260|ref|YP_003042616.1| outer membrane protein, ompa/motb family [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638308|emb|CAR66931.1| outer membrane protein, ompa/motb family [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782710|emb|CAQ85875.1| outer membrane protein, ompa/motb family [Photorhabdus asymbiotica] Length = 387 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 68/181 (37%), Gaps = 7/181 (3%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + L +N + P+ + L + I+ L + + Sbjct: 201 TGSLYIGLNTRLDQQTEPVLTSIYDLPLPEAALPTESFSIAHLRQVLQPMIEQQDITVSQ 260 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279 + +++ + +F +S+ P LQ++ + L +T + +RGH+D P Sbjct: 261 NADNVSVTL---QGGGLFASASATLNPLYQTPLQELAKQLNLTTGKVIVRGHSDNLPIHT 317 Query: 280 -IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 N+ LSL RA + Q L + + R+ ++ + + + NRRI+I Sbjct: 318 HTYSSNYALSLARAETVAQQLRTNLLQPQRL-QVESAGAEAPLVPNTTAKNRALNRRIEI 376 Query: 337 L 337 + Sbjct: 377 I 377 >gi|16262781|ref|NP_435574.1| outer membrane protein [Sinorhizobium meliloti 1021] gi|307315940|ref|ZP_07595434.1| Protein of unknown function DUF2092, periplasmic [Sinorhizobium meliloti BL225C] gi|14523413|gb|AAK64986.1| outer membrane protein [Sinorhizobium meliloti 1021] gi|306898414|gb|EFN29107.1| Protein of unknown function DUF2092, periplasmic [Sinorhizobium meliloti BL225C] Length = 420 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + FD S P +L I L + + I GHTDA A N RLSL Sbjct: 77 DVHGLSFDTGQSTLQPGAKPLLDDIATALKNFPDWSLRIVGHTDA---SGSAESNERLSL 133 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 +RA + L++ G+ ++ G R +++ NRR++++ Sbjct: 134 ERANTIKAALVERGIDAGKLLAA-GAGQSRPIASNETDEGKALNRRVELM 182 >gi|332882653|ref|ZP_08450265.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679453|gb|EGJ52438.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 290 Score = 96.6 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 9/156 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 R + + +L G++ + + V + + + I+I D+ +F S Sbjct: 117 RRDSVNLALVQSLKGVLGNLDDQDVDIKVEKGVVFINISDKM---LFSSGSYTISKNAKN 173 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSED 307 VL+K+ +V+ + + + GHTD + RDNW LS+ RA +VL G++ + Sbjct: 174 VLEKVAKVVKNKPDFEFMVEGHTDDVRIKKDCIRDNWDLSVMRATEIVRVLQNDFGIAPE 233 Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 R++ G +++ ++ + NRR I+V + Sbjct: 234 RMTAA-GRSYYVPVASNTTAEGRAQNRRTRIVVLPK 268 >gi|317402399|gb|EFV82971.1| OmpA family protein [Achromobacter xylosoxidans C54] Length = 232 Score = 96.6 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 10/126 (7%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + E + ++I FD + P + VL + L E + GHTD+ Sbjct: 109 VVEMPDGSLKVNIPSN---VSFDTDKTDLKPALLPVLDSVARSLNQHPELRAKVVGHTDS 165 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 + N LS++RA S L + GV+ R+ + G + NR Sbjct: 166 T---GALAHNQTLSVNRARSVTDYLSRQGVAATRL-SVEGRGPSDPIGDNATAEGRALNR 221 Query: 333 RIDILV 338 R+++ + Sbjct: 222 RVEVYL 227 >gi|289208562|ref|YP_003460628.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] gi|288944193|gb|ADC71892.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] Length = 238 Score = 96.6 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 76/211 (36%), Gaps = 10/211 (4%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + + + + +D + ++ + + + Sbjct: 30 ERAPDEAANANGEPARDARDTAHRDDSHAAPRNAVYLARDDDAVSARRQHLLDEGHESVA 89 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L + + + L V E I + F+ +S+ P+ + Sbjct: 90 LDRVGFYMDVLTARLRQKLAGHDVEMEREGRIITLIF---PGAKAFETNSAEIHPDMVST 146 Query: 252 LQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L +G+VL +++I GHTD++ R N LS RA S + L +GV E RI Sbjct: 147 LDALGQVLEEYDASLVTIAGHTDSAGARG---YNQHLSEQRALSVGRHLHDNGVGEARII 203 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVE 339 I G+ R +D + NRR+++ VE Sbjct: 204 AI-GYGPDRPIADNDTPHGRALNRRVELRVE 233 >gi|197295086|ref|YP_002153627.1| putative outer membrane protein [Burkholderia cenocepacia J2315] gi|195944565|emb|CAR57169.1| putative outer membrane protein [Burkholderia cenocepacia J2315] Length = 220 Score = 96.6 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F S++ P L K+ + + G+TDA+ N LS R Sbjct: 114 GDAYFATDSAVLTPAATATLDKLLNQQGDRHFARVEVDGYTDAT---GSDAHNQALSKRR 170 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 A + L + G+ D +G ++D + NRR++I ++ Sbjct: 171 ADAVAGYLREHGLKADSF-AANGHGEANPAASNDTVEGRARNRRVEISLQK 220 >gi|152971688|ref|YP_001336797.1| hypothetical protein KPN_03169 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956537|gb|ABR78567.1| hypothetical protein KPN_03169 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 567 Score = 96.6 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 11/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + L + + + + V + + + +FD + + VL Sbjct: 396 ERLRQPVWRVIRDYRPPEKKRDVADALPVQSVRL-----DSMALFDVGQARLKDGSTKVL 450 Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + I + G+TD + + N +LSL RA + ++++ Sbjct: 451 INALVNIRARPGWLIVVTGYTDTT---GNKKANQQLSLRRAEAVRDWMLQTSDIPATFFA 507 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + G +D +ANRR++I + R Sbjct: 508 VQGLGESHPAATNDTPEGRAANRRVEISLVPR 539 >gi|255532299|ref|YP_003092671.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366] gi|255345283|gb|ACU04609.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366] Length = 175 Score = 96.6 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 8/112 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLD 290 + +F +SS ++ + + +V+ + + GH+D + N LS Sbjct: 66 SEILFPTNSSYLNEKSKSRIDDVAKVIRNKYADRKVLVEGHSDKT---GTPEYNLWLSEK 122 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 RA S L+ G+ E I SG R + NRR+++ V Sbjct: 123 RAASVKTYLVSLGIPEANIKT-SGLGDTRPVADNKTKEGRLINRRVEVTVLK 173 >gi|224437727|ref|ZP_03658674.1| OmpA family protein [Helicobacter cinaedi CCUG 18818] Length = 147 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 12/147 (8%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + L + GV GI++++ F S + VL +V Sbjct: 1 MDYQDKQLRKELQGTGVSVSREGDGIILNMPGDIT---FKSGSDDLSSDFYKVLN--KKV 55 Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L ++++ G TD + + N LS RA S L V +R + G Sbjct: 56 LNKYDKTIVTVVGFTDNT---GSDKTNLALSKKRAESVAAYLQNQKVKTERFV-VDGLGE 111 Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342 ++ + NRR++I + Q Sbjct: 112 SEPIASNKTAEGRAKNRRVEISLTAIQ 138 >gi|254474819|ref|ZP_05088205.1| flagellar motor protein [Ruegeria sp. R11] gi|214029062|gb|EEB69897.1| flagellar motor protein [Ruegeria sp. R11] Length = 655 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 94/301 (31%), Gaps = 16/301 (5%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + + ++Q + AS D + E+ + + Sbjct: 358 LANAAAADRDVLQQRLLAALSDREDASAKASDLASLAEQRAALLAQARESLSQEQEISQE 417 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 T Q + ++ + + + EE Sbjct: 418 AQRQTALLNQQVAALREQLGSLQALLDDYKARDVAQQVQMQNLGQDLNAALARAAAEERR 477 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 +E+ +L D A+ + S + VL I + Sbjct: 478 RRILEEEERKRLEAEAAQLSDKAQDLEQYRSEFFGRL--RDVLGNQEGVRIEGDRFVFAS 535 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRN--IARD 283 +F S+ PE + K+ +L +I + GHTD +P D Sbjct: 536 EVLFAPGSADLSPEGRAEIAKVARILQTVAAAIPQGINWIIRVDGHTDDTPLGAHPKFAD 595 Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 NW LS RA S + ++++ G+ +R+S +GF ++ ++ + NRRI++ + Sbjct: 596 NWELSQGRALSVVRYMVQALGIPPERLSA-NGFGEYQPVNPAETPEARAQNRRIELKFTE 654 Query: 341 R 341 R Sbjct: 655 R 655 >gi|171315988|ref|ZP_02905216.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] gi|171098892|gb|EDT43683.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] Length = 592 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + +FD + T + E++ + + G+ D N +LS+D Sbjct: 471 DSMSLFDSGKARLRTGTTRAMVDALELIKAHPDKRVLVAGYADDQ---GRPDRNLKLSID 527 Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA + L+++ G+ R I G+ R + + NRR++I + Sbjct: 528 RASAVRDWLVEASGIPPTRF-AIQGYGDTRPVADNATPEGRAKNRRVEITLVPD 580 >gi|294624615|ref|ZP_06703288.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665275|ref|ZP_06730569.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292601088|gb|EFF45152.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292604952|gb|EFF48309.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 223 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS +++++ + + L+ +A R ++ I R + Sbjct: 43 QLSSRLDAEVRQRQAEAQRRQTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S PE VL+ + + L E++ + G TD P DNW LS Sbjct: 93 FAFNSDELQPEGREVLKSLATPLTQYLRARDEILMVSGFTDDRPVLGGNRRYADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 RA + + L+ GV + + F + ++ + NRR++I Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADEARRAKNRRVEI 200 >gi|153875874|ref|ZP_02003478.1| OmpA/MotB [Beggiatoa sp. PS] gi|152067662|gb|EDN66522.1| OmpA/MotB [Beggiatoa sp. PS] Length = 263 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 75/233 (32%), Gaps = 14/233 (6%) Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 GS K E Y + ++K + ++ + + I Sbjct: 30 GSNISKNDGILKEARDTYAVAAAYESSANLEALSKAKKALENAENAETVEEIKHFAYLAK 89 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 +A ++K + L + +S + + + + V L + ++ Sbjct: 90 QQAQIAISIAERQKTERERLVGQKNSRIDKPILETQQQSVSINPQLEKQLNNWQQRQTGR 149 Query: 236 M-------FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRL 287 + F+ + ++ + L I GHTD I N L Sbjct: 150 LTITLNEVFENDRTDLSQTAQSDIKTLAAFLKQHPYFRISIEGHTDN---AGIHTHNLGL 206 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 S RA S LM G++ RI + GF R ++ NRR++I++ Sbjct: 207 SERRATSVKFALMNDGITSKRI-TVKGFGETRPIGSNRTQQGRQKNRRVEIII 258 >gi|84394243|ref|ZP_00992970.1| Outer membrane protein [Vibrio splendidus 12B01] gi|84375118|gb|EAP92038.1| Outer membrane protein [Vibrio splendidus 12B01] Length = 356 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 9/139 (6%) Query: 205 GLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ I + + + ++++ + + MF +S+ + + L + EVL Sbjct: 202 QAPSEPITEPAVVVEEKMAVVVTKAQTESYSQEMFATNSTELSTDGKIALMPLVEVLKAH 261 Query: 263 TEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 + + GHTD++ A N +S RA + + + G+ DRI+ SG Sbjct: 262 PQSSVAVVGHTDST---GAAEYNLMISKKRAAAVAAYIEEQGIEADRITA-SGEGEENPI 317 Query: 322 IASDPM--NSANRRIDILV 338 ++ + NRR+D + Sbjct: 318 ASNATAEGRAQNRRVDATI 336 >gi|238023632|ref|YP_002907864.1| outer membrane protein [Burkholderia glumae BGR1] gi|237878297|gb|ACR30629.1| Outer membrane protein [Burkholderia glumae BGR1] Length = 569 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 81/276 (29%), Gaps = 13/276 (4%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 T G+ P ++ + + ++ R E Sbjct: 294 TRRTGLHVPIGAPRPDPLPLPGIAAAPREAYGTGVVPRRGVWCNVEFARHERFASPRPMQ 353 Query: 138 QQSEHCKNSLTRDSEKGKDLCKS--TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 +L + +++ + ++ ++ + R +L Sbjct: 354 AALSAVAVTLALSICVSAWQNSLLVRRVSHALDAYRDTPALDIAAKRAAVGALRARFAEL 413 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILIS-----IIDQRNTPMFDKSSSIPLPETIV 250 + + + + + +G + S + +FD + + I Sbjct: 414 ERYANQGVPTGLGWGLYRGAPLHEAVRRAIASWRPASGVTLDQLSLFDSGRATLKRDAIP 473 Query: 251 VLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L+ + G +LA+ + + I GHTD N +LS RA + ++ G Sbjct: 474 KLRNVLGRILANRDQRVLIAGHTDDV---GSPEANLKLSQARALAIRDWFVRVGALPVTR 530 Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 I + R + + NRR++IL G Sbjct: 531 FAIQAYGDTRPIADNLTPQGRAMNRRVEILFIPDPG 566 >gi|126732859|ref|ZP_01748650.1| OmpA family protein [Sagittula stellata E-37] gi|126706635|gb|EBA05709.1| OmpA family protein [Sagittula stellata E-37] Length = 227 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 10/139 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + V T +++++ +F S+ + +Q + + + Sbjct: 92 EAELRQQLGSQVDIRNTGDRLIVTMPQD---ILFATDSATLSGGLLGDIQDVAQSVLRYP 148 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I GHTD+ A N LS RA + V + V RI ++ G + Sbjct: 149 NTTTQIIGHTDSD---GDAAYNLSLSQRRAQAVANVFLAQNVPSSRI-QVIGRGEDQPIA 204 Query: 323 ASDP--MNSANRRIDILVE 339 ++ NRR++I++ Sbjct: 205 SNLTPQGKQQNRRVEIVIL 223 >gi|172061391|ref|YP_001809043.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6] gi|171993908|gb|ACB64827.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 215 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 ++ F + P +L + L + + S+ G+TD++ A+ N LS + Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQLTGSVIGYTDST---GSAQLNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + GV+ R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNALAQRGVAGGRLSA-QGMGPSNPIADNATEAGRAQNRRVEIYLRAPQ 212 >gi|71276562|ref|ZP_00652836.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Xylella fastidiosa Dixon] gi|71900206|ref|ZP_00682345.1| OmpA/MotB [Xylella fastidiosa Ann-1] gi|170730945|ref|YP_001776378.1| OmpA family protein [Xylella fastidiosa M12] gi|182682310|ref|YP_001830470.1| OmpA/MotB domain-containing protein [Xylella fastidiosa M23] gi|71162633|gb|EAO12361.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Xylella fastidiosa Dixon] gi|71730039|gb|EAO32131.1| OmpA/MotB [Xylella fastidiosa Ann-1] gi|167965738|gb|ACA12748.1| OmpA family protein [Xylella fastidiosa M12] gi|182632420|gb|ACB93196.1| OmpA/MotB domain protein [Xylella fastidiosa M23] Length = 241 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 L G+ + I +++ D FD S+ P+ L+ + Sbjct: 90 NYQDRQERALRERTANTGIDVKRDGDNITLNLPDGIT---FDFGKSMLKPQFYGALKNVA 146 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L + +I + G+TD+ N RLS DRA + L GV +R+ +ISG Sbjct: 147 STLREYNQTMIEVVGYTDSI---GSDVVNQRLSEDRAGAVASYLAAQGVQRERM-EISGM 202 Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338 + NRR++I + Sbjct: 203 GKRYPIADNSTEAGRSKNRRVEIHL 227 >gi|330962099|gb|EGH62359.1| hypothetical protein PMA4326_26442 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 437 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 7/138 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L D V E +++I +F S+ + + ++ +I + + Sbjct: 300 LADDIKAGKVAVEDAVDRSVVTIRGDE---LFASGSATIVDDFQPLMLRIADAIRKVKGD 356 Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + I GH+D P NW LS RA ++L R + G + ++ Sbjct: 357 VRITGHSDNRPIATLRFPSNWALSQARAEQVLRILAAKTGQPQRFTA-EGRSDTEPLGSN 415 Query: 325 DPM--NSANRRIDILVED 340 + NRR++I V Sbjct: 416 ATAEGRAKNRRVEITVLA 433 >gi|239905906|ref|YP_002952645.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1] gi|239795770|dbj|BAH74759.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1] Length = 252 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 94/257 (36%), Gaps = 15/257 (5%) Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 PP ++ ++ D + DE I ++ + +T + + + Sbjct: 2 PPRSAAMSEDDDNYDEEIEESEAPSEWLTTLAD------MSMLLMSFFIMLFSMSSLDVK 55 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 + SE + + ++ ++ A +++ + + + + + + Sbjct: 56 KFSESFTSVKTALGVKDKAVTMAPISTGDMNVLVEQAKLKQRIIGEQRRVYDQFRTYVSS 115 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVIS 267 + V I I +F K E L+ + + L + E I+ Sbjct: 116 KGLDGVVAATLEAGKITIGF---PAGVLFPKDGVDLTEEGKGKLRTLFDFLIKAAGERIN 172 Query: 268 IRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 IRG TD P + RDNW +S RA + + ++ G+ +R++ +G A +D Sbjct: 173 IRGFTDNEPPGAGSRYRDNWEISSLRAVAVLRYMVSLGMPPNRLTA-TGLADLEPLYPND 231 Query: 326 PM--NSANRRIDILVED 340 + N+R++ ++E Sbjct: 232 TPEHRARNQRVEFVLER 248 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 19/55 (34%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + W AD +LM+FF++++ +++ D A Sbjct: 20 EESEAPSEWLTTLADMSMLLMSFFIMLFSMSSLDVKKFSESFTSVKTALGVKDKA 74 >gi|162451840|ref|YP_001614207.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] gi|161162422|emb|CAN93727.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 628 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 34/279 (12%), Positives = 77/279 (27%), Gaps = 14/279 (5%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + D P +R +D+ T + + + Sbjct: 353 PDVKGDPSPDRAKDGCPPADRDGDTVLDIDDACPSTPGARSADATQNGCPEDSDDDGFHD 412 Query: 132 FYLS----NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + S+ K G + ++D ++ N Sbjct: 413 GIDACPSVRGGASDDPKKIGCPGDTDGDGIADASDACPTVKGPANRDPKKNGCPDDPDGD 472 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + D N F + + + + P Sbjct: 473 GVRGAADACPNERGPSDPDPRQN--GCPRFVRVNADEIKTSKPVQFVVYGKTRAETVDPI 530 Query: 248 TIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + VL ++ + + + ++ + ++GHTD N RLS RA + L+ +GV Sbjct: 531 SDEVLYEVRDTIQQNPDIELVEVQGHTDD---NGTEEYNLRLSQQRADAVLSWLVAAGVP 587 Query: 306 EDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 +++ G+ + + NRR+ ++ R+ Sbjct: 588 REKLVA-KGYGFEQPVGDNRVKTGRQKNRRVQFVIVKRK 625 >gi|189499949|ref|YP_001959419.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides BS1] gi|189495390|gb|ACE03938.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides BS1] Length = 229 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 10/138 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 DN V G E GI + +F SS + +QK+ +L + Sbjct: 82 QAKEIDNQVDGAQVERVGEGIRVVF---DTGLLFSTGSSTLTSTSSYNIQKLANILNKYS 138 Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GHTD+ N +LS RA S +L VS+ RIS I G+ R Sbjct: 139 DTDIVVEGHTDSQ---GSETYNQQLSEKRAESVSSLLRAYNVSKSRISTI-GYGETRPVA 194 Query: 323 ASDPMNSA--NRRIDILV 338 +++ + NRR+++L+ Sbjct: 195 SNETASGRKLNRRVEVLI 212 >gi|300719120|ref|YP_003743923.1| outer membrane protein [Erwinia billingiae Eb661] gi|299064956|emb|CAX62076.1| Putative outer membrane protein [Erwinia billingiae Eb661] Length = 220 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SSS P L + Sbjct: 80 YMDVQEAKLRDKMKGTGVSVTRQGDNIVLNM---PNNVTFDSSSSTLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ + N LS RA S L+ GV+ +R+ + SG Sbjct: 137 VLKEYPKTAVNVAGYTDST---GSRQLNMTLSQQRADSVGSALITQGVAANRV-RTSGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PDNPVASNSTAEGKAQNRRVEITL 216 >gi|24213198|ref|NP_710679.1| flagellar motor protein [Leptospira interrogans serovar Lai str. 56601] gi|24193917|gb|AAN47697.1| flagellar motor protein [Leptospira interrogans serovar Lai str. 56601] Length = 223 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 7/192 (3%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 K + L KS + K N+ LS+ + ++ ++ + +S Sbjct: 21 KYESLLKSYEESKLENQRILGEKGDLSRSLEELKRIQEESDRRIQEYKALMSTFRFLIDA 80 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 + + +++ + +F S+ P ++++ +LA I GH Sbjct: 81 GKLKIKIIDGRMVVVLSSD---ILFPIGSAHLSPAGTAAIKEVTTLLASLEGKRFQIEGH 137 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 TD +P NW L+ RA + ++K+G+ E RIS S R + + + Sbjct: 138 TDDTPTGIKGYTNWELASSRALNVLHTMIKAGMPEVRISAAS-MGASRPALPNTSPENRS 196 Query: 331 -NRRIDILVEDR 341 NRRI+I++ Sbjct: 197 SNRRIEIVIVPD 208 >gi|86138080|ref|ZP_01056655.1| hypothetical protein MED193_01095 [Roseobacter sp. MED193] gi|85825107|gb|EAQ45307.1| hypothetical protein MED193_01095 [Roseobacter sp. MED193] Length = 347 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 7/128 (5%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDA 274 F I+ Q + F +S + L + ++++ + I + GHTD Sbjct: 224 DFSREACIGRFDILSQSRSVNFAPGTSRLDQRSTSFLDSLFDIISRCPAMVIEVGGHTDD 283 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 + A N RLS RA S + L G++ DR+ + G+ + ++ + NR Sbjct: 284 ---KGSAAANTRLSQKRASSVVRYLSDKGIARDRLQSV-GYGESTPLVPNNSAQNRAKNR 339 Query: 333 RIDILVED 340 RI V + Sbjct: 340 RIAFKVLN 347 >gi|218887954|ref|YP_002437275.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758908|gb|ACL09807.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 248 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 6/111 (5%) Query: 235 PMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDR 291 +F+ S E +LQ + + + H + I++RG TD+SP RDNW LS R Sbjct: 131 VLFEPGSDTITAEGRKLLQHMYDLFVRHPDQDINVRGFTDSSPTPSGGRFRDNWDLSSSR 190 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 A + + L+ G++ RI+ +G A + + NRR++ ++E Sbjct: 191 AINVLRTLLDMGIAPHRITA-TGLADMNPLFPNTTEENRARNRRVEFVLEK 240 >gi|107028365|ref|YP_625460.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116686361|ref|YP_839608.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia HI2424] gi|105897529|gb|ABF80487.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116652076|gb|ABK12715.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424] Length = 220 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F S++ P L + A + + G+TDA+ N LS R Sbjct: 114 GDAYFATDSAVLTPAATAALDTLLNRQADRHFARVEVDGYTDAT---GSDAHNQALSKRR 170 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 A + L + G+ D +G ++D + NRR++I ++ Sbjct: 171 ADAVAGYLREHGLKADSF-AAAGHGEANPAASNDTAEGRARNRRVEISLQK 220 >gi|293194233|ref|ZP_06609955.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus F0309] gi|292819752|gb|EFF78765.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus F0309] Length = 348 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 17/130 (13%) Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASP 276 G +I++ D +FD S P+ L K+ VL I GHTD+ Sbjct: 224 PVESCGTVITLEDS---ILFDFGESDIRPDAAHTLSKLATVLNDAKVPAAHIYGHTDSV- 279 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328 + N +LS DRA + L K G S I +G+ + ++ Sbjct: 280 --SDEAFNQKLSEDRANAVSAELKKDGASA--ILDATGYGESKPVAPNENADGSDNPAGR 335 Query: 329 SANRRIDILV 338 + NRR++I + Sbjct: 336 ALNRRVEIFI 345 >gi|221200257|ref|ZP_03573299.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] gi|221205937|ref|ZP_03578951.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221173949|gb|EEE06382.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221179598|gb|EEE12003.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] Length = 220 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F + P L K+ + +S+ G+TD+ N LS R Sbjct: 114 GDALFASGLATLTPAARASLDKLLNAYGDRSYTQVSVTGYTDSV---GSDASNLALSKRR 170 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 A + L + G+ R ++G ++ NRR++I ++ Sbjct: 171 AEAVAAYLQQRGLQA-RSLTVTGRGSADPIASNATAEGRATNRRVEISLQR 220 >gi|74318359|ref|YP_316099.1| hypothetical protein Tbd_2341 [Thiobacillus denitrificans ATCC 25259] gi|74057854|gb|AAZ98294.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 225 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 15/154 (9%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ +DL K++ + ++ V + +L+S+ FD S+ Sbjct: 79 DQQAKDLQKQLRPEI-----EHGDISVEKRASDNALLVSMTASTG---FDNDSAALKAGY 130 Query: 249 IVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + L KI VL +++ GHTD+ + N LS RA S V+ Sbjct: 131 LPTLDKISRVLNQYGKTTVTVIGHTDSV---GTTQYNQALSERRAQSVLDYFASQKVNPL 187 Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 R+ G + + + NRR+++ + Sbjct: 188 RLESY-GKGETEPRADNSTEDGRRLNRRVELWIL 220 >gi|58580251|ref|YP_199267.1| hypothetical protein XOO0628 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622235|ref|YP_449607.1| hypothetical protein XOO_0578 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188574968|ref|YP_001911897.1| hypothetical protein PXO_04090 [Xanthomonas oryzae pv. oryzae PXO99A] gi|58424845|gb|AAW73882.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366175|dbj|BAE67333.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519420|gb|ACD57365.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 224 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS A+K+++ + + L+ +A R ++ I R + Sbjct: 43 QLSSRLDEAVKQRQAEAQRRQTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S PE VL+ + + L E++ + G TD P DNW LS Sbjct: 93 FAFNSDELQPEGREVLKSLAAPLAQYLRAREEILMVSGFTDDRPVLGGNRRYADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 RA + + L+ GV + + F + ++ + NRR++I Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADEARRAKNRRVEI 200 >gi|269793616|ref|YP_003313071.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Sanguibacter keddieii DSM 10542] gi|269095801|gb|ACZ20237.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Sanguibacter keddieii DSM 10542] Length = 430 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 14/115 (12%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + +FD PE+ L + LA + + I GHTD+ + N LS DR Sbjct: 318 DAALFDFGKHTLRPESQQTLDSLAAALAETGAPVLQIGGHTDSI---SDDAFNQTLSEDR 374 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--------NSANRRIDILV 338 A + L++ GV+ + +G+ + NRR++I V Sbjct: 375 AQAVADGLVERGVTAT--LETTGYGETQPVAPETTADGADNPAGRQLNRRVEIFV 427 >gi|226328442|ref|ZP_03803960.1| hypothetical protein PROPEN_02336 [Proteus penneri ATCC 35198] gi|225203175|gb|EEG85529.1| hypothetical protein PROPEN_02336 [Proteus penneri ATCC 35198] Length = 340 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 6/115 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNW 285 ++ + +F E VL + + + G+TD + N Sbjct: 207 EMVTLDSLALFASGQYKLKNEATKVLVDALINIKAKPGWLIVISGYTDNT---GNPDLNQ 263 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 +LSL RA + ++K+ + G+ H+ + + NRR++I + Sbjct: 264 KLSLKRAEAVRDWMIKTSDIAPSCFAVQGYGQHQPVADNSTLDGRARNRRVEIRL 318 >gi|163755499|ref|ZP_02162618.1| putative flagellar motor protein MotB [Kordia algicida OT-1] gi|161324412|gb|EDP95742.1| putative flagellar motor protein MotB [Kordia algicida OT-1] Length = 286 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 90/222 (40%), Gaps = 11/222 (4%) Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 LE + ++ E + L + ++ K + + E KEK L + Sbjct: 49 LEEKASASARAEALEDRVSDLKKTNQDLIQNTKDMTVLTTKGAENLEKSLESMKEKDLKI 108 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIV---KGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 R + + ++ + + + + + + ISI D+ +F S Sbjct: 109 TRLQDALNKKDSVTLAIVSSLKKAVGIDDPDIEINVEKGVVFISIADKL---LFKSGSYN 165 Query: 244 PLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMK 301 + VVL K+ +V+ + GHTD P+ + + DNW LS+ R+ S +VL + Sbjct: 166 VTDKAKVVLGKVAKVVNSKPNFECMVEGHTDNVPYNKGVLIDNWDLSVKRSTSIIRVLQE 225 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 GV+ ++ G +++ + +D + NRR I+V + Sbjct: 226 LGVNPGQLIAA-GRSYYVPLVENDTPENRATNRRTRIVVLPK 266 >gi|315605260|ref|ZP_07880306.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp. oral taxon 180 str. F0310] gi|315313077|gb|EFU61148.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp. oral taxon 180 str. F0310] Length = 401 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 17/130 (13%) Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASP 276 G +I++ D +FD S P+ L + VL + I GHTD+ Sbjct: 277 PVESCGTVITLEDS---ILFDFGKSDIRPDAAQTLSTLATVLNNAKVPAAHIYGHTDSV- 332 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328 + N +LS DRA + L K+GV+ +G+ + ++ Sbjct: 333 --SDEAFNQKLSEDRANAVMNDLSKNGVTAT--LDATGYGETKPVAPNENPDGSDNPAGR 388 Query: 329 SANRRIDILV 338 + NRR++I + Sbjct: 389 ALNRRVEIYI 398 >gi|325928737|ref|ZP_08189907.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas perforans 91-118] gi|325540905|gb|EGD12477.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas perforans 91-118] Length = 229 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 10/204 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q+ ++ + + ++ L + + + + A + + Sbjct: 18 QRDQYGEQTQQQNRTGRNALIGTAIGVAAGLLTGDSATERRQHAMVGAGIGALSGAAIGQ 77 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 L G+ + I +++ D FD S P+ L + Sbjct: 78 YQDRQERALRERTANTGIEVQRQGDNISLNLPDGIT---FDFGKSALKPQFYTALNGVAS 134 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + ++ + GHTD+ N RLS +RA + Q L GV +R+ + G Sbjct: 135 TLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERASAVAQYLTAQGVQRERMETM-GAG 190 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 + + NRR++I + Sbjct: 191 KRYPIADNTTDAGRAKNRRVEIRL 214 >gi|315921071|ref|ZP_07917311.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313694946|gb|EFS31781.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 280 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 86/216 (39%), Gaps = 20/216 (9%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDLA 196 Q +L RD+ K + + ++N E L L +K + ++R + +L Sbjct: 50 AQMSAQIKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINELQ 109 Query: 197 KKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 I + + + + + +++ D+ +F S+ Sbjct: 110 DMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLDK 166 Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-G 303 L K+ EVL T++ I GHTD P +DNW LS+ RA S ++L+K+ Sbjct: 167 RGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYN 226 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 V+ +I + SG + ++ NRR +I+ Sbjct: 227 VNPLQI-QPSGRGEYMPVDDNETAEGRSKNRRTEII 261 >gi|307727734|ref|YP_003910947.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003] gi|307588259|gb|ADN61656.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003] Length = 321 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 82/281 (29%), Gaps = 14/281 (4%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 ++ + ++ N +S + + + G + Sbjct: 42 VDNSSTSIRTAALPSTSSAGPAVNTAGLASGTTGAGTGAVTASPPPANAAPGQVVVGGKV 101 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 L+ +++ N + + + + KI Sbjct: 102 PDEATKAAVLARLRETYGAANVVDQIEVADVATPPNWSANVQKLIGPQLKQISRGQLKID 161 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKG------VLFETTRTGILISIIDQRNTPMFD 238 + + + + L+ +A+ + + + G+L + R F+ Sbjct: 162 GTQIDVKGEVRNESQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIE-FE 220 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ + +L ++ + T I GHTD N LS RA + Sbjct: 221 TGSATLTAQGRAILDQMAAAMQKMTTRTVAIIGHTDN---SGNRTSNIALSQARADAVKG 277 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 L+ G+ +++ +G + +D + NRRI+ Sbjct: 278 YLVAKGIPPQQMTT-TGVGPDQPIATNDTADGRARNRRIEF 317 >gi|290893982|ref|ZP_06556957.1| chemotaxis protein MotB [Listeria monocytogenes FSL J2-071] gi|290556428|gb|EFD89967.1| chemotaxis protein MotB [Listeria monocytogenes FSL J2-071] Length = 289 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 92/232 (39%), Gaps = 11/232 (4%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 S+ K+++++ N + + + ++ + +K++ Sbjct: 51 ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEAN 110 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 +K+ A+ +K+ + + S + A+N+ + + + G+LI+I D Sbjct: 111 EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYITAENLGTKMTTKYSDEGLLITIRDD--- 167 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291 +F S+ + ++IGE+ A + + GHTD P NW LS+ R Sbjct: 168 ILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 227 Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 A + + +++ V+ S G+ R +D NRR++I+V Sbjct: 228 AVNFMEAIIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 278 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 72/188 (38%), Gaps = 3/188 (1%) Query: 4 HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63 + +E + + + K+ + +W I Y+D +T+L+A F+V++ ++ D + Sbjct: 2 EKGRKREKWRKLSVAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFE 61 Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 + F + ++ ++ P+ + N + +++E K + + + Sbjct: 62 QMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAA 121 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + +N + +Q + +T ++ K K +D I ++ S E Sbjct: 122 LLKKQNEEKIEAFKKQIDSY---ITAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELT 178 Query: 184 LAMKRKKR 191 + + Sbjct: 179 AGKREIAK 186 >gi|255037616|ref|YP_003088237.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254950372|gb|ACT95072.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 412 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 6/106 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S LPE+ L ++ +V++ S I + GHTD N LS RA S Sbjct: 310 FETSKYTLLPESYEELNRLVDVMSDSPTVKIRVEGHTDNV---GDFDKNLELSRQRAESV 366 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMNSANRRIDILVED 340 L++ G+ RI G+ R S+ NRR++ ++ D Sbjct: 367 KNYLVEKGIEGSRIEA-KGYGGTRPITKGSEEERKKNRRVEFVITD 411 >gi|53723969|ref|YP_104341.1| OmpA domain-containing protein [Burkholderia mallei ATCC 23344] gi|67640679|ref|ZP_00439477.1| OmpA family protein [Burkholderia mallei GB8 horse 4] gi|121600594|ref|YP_991404.1| ompA family protein [Burkholderia mallei SAVP1] gi|124386056|ref|YP_001027695.1| ompA family protein [Burkholderia mallei NCTC 10229] gi|126450255|ref|YP_001082667.1| ompA family protein [Burkholderia mallei NCTC 10247] gi|167001412|ref|ZP_02267211.1| ompA family protein [Burkholderia mallei PRL-20] gi|167908671|ref|ZP_02495876.1| ompA family protein [Burkholderia pseudomallei NCTC 13177] gi|217424718|ref|ZP_03456215.1| ompA family protein [Burkholderia pseudomallei 576] gi|237814018|ref|YP_002898469.1| OmpA family protein [Burkholderia pseudomallei MSHR346] gi|254174698|ref|ZP_04881359.1| ompA family protein [Burkholderia mallei ATCC 10399] gi|254201416|ref|ZP_04907780.1| ompA family protein [Burkholderia mallei FMH] gi|254206758|ref|ZP_04913109.1| ompA family protein [Burkholderia mallei JHU] gi|254357247|ref|ZP_04973521.1| ompA family protein [Burkholderia mallei 2002721280] gi|52427392|gb|AAU47985.1| OmpA domain protein [Burkholderia mallei ATCC 23344] gi|121229404|gb|ABM51922.1| ompA family protein [Burkholderia mallei SAVP1] gi|124294076|gb|ABN03345.1| ompA family protein [Burkholderia mallei NCTC 10229] gi|126243125|gb|ABO06218.1| ompA family protein [Burkholderia mallei NCTC 10247] gi|147747310|gb|EDK54386.1| ompA family protein [Burkholderia mallei FMH] gi|147752300|gb|EDK59366.1| ompA family protein [Burkholderia mallei JHU] gi|148026311|gb|EDK84396.1| ompA family protein [Burkholderia mallei 2002721280] gi|160695743|gb|EDP85713.1| ompA family protein [Burkholderia mallei ATCC 10399] gi|217392174|gb|EEC32199.1| ompA family protein [Burkholderia pseudomallei 576] gi|237502962|gb|ACQ95280.1| OmpA family protein [Burkholderia pseudomallei MSHR346] gi|238521446|gb|EEP84897.1| OmpA family protein [Burkholderia mallei GB8 horse 4] gi|243062825|gb|EES45011.1| ompA family protein [Burkholderia mallei PRL-20] Length = 310 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 84/277 (30%), Gaps = 16/277 (5%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + G+ + P + S +T + + Sbjct: 34 PATVTPIDAGGVPVKSVPLAAPVTAAPVAATAGAGATVSSPPPANATPGQVVAGGKVADE 93 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + Q ++ + +T S N ++ K + Sbjct: 94 ATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQ 153 Query: 192 LQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTPMFDKSSS 242 + + + +A ++ + T + G+ +S +Q T F+ S+ Sbjct: 154 IDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSA 213 Query: 243 IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 P+ +L ++ LA + I GHTD N LS RA + L+ Sbjct: 214 TLTPQGRAILDQMAGALAKMSSRTVEIIGHTDN---SGNRTSNIALSQARADAVKGYLVT 270 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 G++ +++ +G + +D + NRRI+ Sbjct: 271 KGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRIEF 306 >gi|162452025|ref|YP_001614392.1| hypothetical protein sce3752 [Sorangium cellulosum 'So ce 56'] gi|161162607|emb|CAN93912.1| putative membrane protein [Sorangium cellulosum 'So ce 56'] Length = 207 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 8/116 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSL 289 +F+ +S LPE+ VL + E L +V + GHTD+ N LS Sbjct: 76 PGPVVFETNSDKLLPESDEVLNLVDEFLKQREDVSLLRVEGHTDSD---GEDAANQTLSE 132 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343 RA + + L+ G R + GF + ++ + NRR + +G Sbjct: 133 KRAMAVARWLVAKGNDCKRFIAV-GFGETKPVADNNTPEGKAQNRRTGFFIAAIKG 187 >gi|304311338|ref|YP_003810936.1| Putative outer membrane protein [gamma proteobacterium HdN1] gi|301797071|emb|CBL45284.1| Putative outer membrane protein [gamma proteobacterium HdN1] Length = 208 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 66/197 (33%), Gaps = 10/197 (5%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 T D G+ + + + A + L Sbjct: 19 TTDPYTGESKVSKAAIGAGVGAVLGAAVSSKKDRAKGAAIGAALGGGTGVYFDRQEAKLR 78 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-I 266 GV T GI +++ F + S +P VL+ + VL I Sbjct: 79 ETLNNTGVSVTRTPEGIKLNM---PGAISFPSNQSGLMPSFYPVLESVALVLKEFNNTAI 135 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + GHTD++ A N RLS RA S L GV+ R+ ++ G+ + Sbjct: 136 KVSGHTDST---GGAELNQRLSEQRAESVAAFLSGQGVARARM-QVYGYGPRYPVADNKS 191 Query: 327 MN--SANRRIDILVEDR 341 +ANRR++I + + Sbjct: 192 EAGKAANRRVEIDILNP 208 >gi|282881335|ref|ZP_06290015.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1] gi|281304811|gb|EFA96891.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1] Length = 225 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 9/146 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K+++ + V + V+ V + + ++ + +F S +I + L K Sbjct: 70 MDKVAAETAAQVENAKVEEVTDKNGLKAVKVTF---DSGILFASSKAILNQASKNELAKF 126 Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 VL + + + I GHTD++ N LS DRA S L GVS + +SG Sbjct: 127 STVLKKNRDCHVDILGHTDST---GNDGINIPLSNDRAQSVVNYLKSCGVSSSQFQNVSG 183 Query: 315 FAHHRLKIASDP--MNSANRRIDILV 338 + ++ NRR+++ + Sbjct: 184 MGSSQPVATNETKAGRQQNRRVEVYL 209 >gi|124267424|ref|YP_001021428.1| putative signal peptide protein [Methylibium petroleiphilum PM1] gi|124260199|gb|ABM95193.1| putative signal peptide protein [Methylibium petroleiphilum PM1] Length = 219 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD + PE L + +A + I GHTD+ N +LSL R+ Sbjct: 109 DAFFDFDKATLKPEAKSKLDDLASKIAGLNLEVVIAVGHTDSV---GSDAYNQKLSLRRS 165 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + L G+ ++RI G + + + NRR +I V + Sbjct: 166 EAVKAYLESKGIEKNRIYT-EGKGEKQPVADNKTADGRAKNRRTEIEVVGTR 216 >gi|53721140|ref|YP_110125.1| hypothetical protein BPSS0102 [Burkholderia pseudomallei K96243] gi|167818184|ref|ZP_02449864.1| hypothetical protein Bpse9_23811 [Burkholderia pseudomallei 91] gi|167896649|ref|ZP_02484051.1| hypothetical protein Bpse7_23090 [Burkholderia pseudomallei 7894] gi|167921273|ref|ZP_02508364.1| hypothetical protein BpseBC_22178 [Burkholderia pseudomallei BCC215] gi|52211554|emb|CAH37548.1| OmpA family membrane protein [Burkholderia pseudomallei K96243] Length = 433 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 75/229 (32%), Gaps = 12/229 (5%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +Q ++ + + L +S S + Sbjct: 205 EQIRQRLWTLITGARDAIQPELSLRWRGAEPGRLPLLRSVPAWASGALVFLLLFGLFAFY 264 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233 + + + L+ I+ + +L + L+++ + R Sbjct: 265 QYRLLTERNALEARILAIAKDEPATPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRG 324 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292 MF S LPE VL K+ +A +++ GH+D P R +N LS RA Sbjct: 325 DAMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 384 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 Q+L++ G DRI G + + S NRR++I V Sbjct: 385 AYVAQILVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 432 >gi|254255311|ref|ZP_04948627.1| Outer membrane protein [Burkholderia dolosa AUO158] gi|124901048|gb|EAY71798.1| Outer membrane protein [Burkholderia dolosa AUO158] Length = 232 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 10/118 (8%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARD 283 I++ N FD + P+ L + + +T I G+TD++ A Sbjct: 122 RITLDSDAN---FDTDRATLKPDARDRLDVLIDAARGTTFQTVAIAGYTDST---GTAEH 175 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 N RLS RA + Q L + G+ + + G+ + + NRR+DI +E Sbjct: 176 NQRLSERRAQAVAQYLREHGLRAQKFD-VRGYGESNPVATNTTAAGRAKNRRVDITLE 232 >gi|217965216|ref|YP_002350894.1| chemotaxis protein MotB [Listeria monocytogenes HCC23] gi|217334486|gb|ACK40280.1| chemotaxis protein MotB (Motility protein B) [Listeria monocytogenes HCC23] gi|307570225|emb|CAR83404.1| chemotaxis protein [Listeria monocytogenes L99] Length = 275 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 92/232 (39%), Gaps = 11/232 (4%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 S+ K+++++ N + + + ++ + +K++ Sbjct: 37 ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEAT 96 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 +K+ A+ +K+ + + S + A+N+ + + + G+LI+I D Sbjct: 97 EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDD--- 153 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291 +F S+ + ++IGE+ A + + GHTD P NW LS+ R Sbjct: 154 ILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 213 Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 A + + +++ V+ S G+ R +D NRR++I+V Sbjct: 214 AVNFMEAIIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 264 Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 64/173 (36%), Gaps = 3/173 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ + +W I Y+D +T+L+A F+V++ ++ D + + F + Sbjct: 3 KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 ++ ++ P+ + N + +++E K + + + +N + + Sbjct: 63 GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAALLKKQNEEKIEAFKK 122 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 Q + + ++ K K +D I ++ S E + + Sbjct: 123 QIDSY---IAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAK 172 >gi|322835249|ref|YP_004215275.1| OmpA/MotB domain protein [Rahnella sp. Y9602] gi|321170450|gb|ADW76148.1| OmpA/MotB domain protein [Rahnella sp. Y9602] Length = 558 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD P ++ +L + I + GHTD A+ N LSL Sbjct: 434 DSLSLFDTGKYELKPGSLKMLVNTLVDIKAKPGWLIVVAGHTD---ITGDAKANQTLSLK 490 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA S L S VS + G+ R +D +ANRR++I + Sbjct: 491 RAGSLRDWMLSTSDVSPT-CFAVQGYGATRPVATNDTPEGRAANRRVEISL 540 >gi|302343736|ref|YP_003808265.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075] gi|301640349|gb|ADK85671.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075] Length = 260 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 74/210 (35%), Gaps = 7/210 (3%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 L + + +E+ K L S +E P ++ + Sbjct: 18 YTALMILLLAFFILLNSMGATEESKVRQAYKSLMDSFGFQEGGVKPFTTQTMQSSSAVVA 77 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + + + + + V ++ + I +F S+ P + Sbjct: 78 AMNPIDEDYVVLRGMVFENRLDDQVRLLRSQGMRTVVINADM---LFAPGSAKLSPNILP 134 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L ++ V+ +S+ GHTD P+R +DNW LS RA S L+ GVS R+ Sbjct: 135 FLDEVAAVIKDRAYPLSVYGHTDDEPWRGKGGQDNWTLSAQRALSVVAHLVSRGVSASRL 194 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDIL 337 + G A + ++ N R+ ++ Sbjct: 195 AAF-GLAGTQPIASNTTAEGRRQNNRVALV 223 >gi|262404049|ref|ZP_06080604.1| outer membrane protein A precursor [Vibrio sp. RC586] gi|262349081|gb|EEY98219.1| outer membrane protein A precursor [Vibrio sp. RC586] Length = 335 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 7/114 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWR 286 + F+ SS I L I L + + ++ GHTD++ N Sbjct: 219 FSAKNMDGFFENDSSRLSHNVIEQLSNIAATLNNHPQSRAVIVGHTDST---GSTAYNQL 275 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 LS DRA A +L++ GV+ +I + G + + NRRI+I + Sbjct: 276 LSEDRAQEAANLLIELGVTPTQI-EWRGLGESNPIADNHTADGRAQNRRIEITI 328 >gi|148652125|ref|YP_001279218.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1] gi|148571209|gb|ABQ93268.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1] Length = 537 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 66/225 (29%), Gaps = 9/225 (4%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 T +++ + L +++ + + D+ I+ + L Sbjct: 280 GTGGDNCRADIDDGFATDMPAAPHLAAILPLIKNTPNANVIIEGNDVR--IDAPDQAQLD 337 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L + A + + + +AD ++ Sbjct: 338 KLVADIKAAAPELNVVATGPVDFDAEVKQSIADATTAMDNLGENPDPKDVARALSLQVIN 397 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + E VL + EV+ ++ I GHTD+ N LS RA + Sbjct: 398 FAVDKTDIPAENQAVLDRAVEVMKQVPDMQLLILGHTDSD---GDDAYNKDLSQRRAEAV 454 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 L+ G ++ G ++ N NRRI+ V Sbjct: 455 KAYLVSKGADAAKLMT-KGMGETDPIATNETENGKFRNRRIEFTV 498 >gi|310818239|ref|YP_003950597.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309391311|gb|ADO68770.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1] Length = 565 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYS 294 F I L E+ +L+++ ++L E+ + GHTD+ + N LS RA S Sbjct: 426 FATDQDILLSESWPILEEVSQMLKTHPEIKRLLVEGHTDSR---SSDEYNLELSRRRAAS 482 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342 L +SGV +R+ GF R ++ + NRR++ V Sbjct: 483 IRVYLEESGVESERLCS-QGFGRSRPVADNKNEEGMALNRRVEFTVLPPP 531 >gi|126730426|ref|ZP_01746237.1| OmpA domain protein [Sagittula stellata E-37] gi|126709159|gb|EBA08214.1| OmpA domain protein [Sagittula stellata E-37] Length = 718 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 87/301 (28%), Gaps = 11/301 (3%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + + + T T I + + + E + Sbjct: 307 VTLVALEGTPQGTFDRIVGELETTLPEVFALHAVLPKAPEQDAEGPPDFTATLSPEGKVQ 366 Query: 109 NSVDLKIG---STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 L T R + Y + + R + L + Sbjct: 367 LRGRLTTEIARQTADSYARARFGSEAVYTAARLADNLPSDWPVRTLAGLEALSMLANGSI 426 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI- 224 ++ ++ ++ A L + + ++ + + + T + Sbjct: 427 TVTPDDVIVTGQTGNQEASAQIATLLAGKLGENATFDINVTYVERLDPTLGIPTPEQCVG 486 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 +I + F+ S+ +L ++ ++L + + I GHTD+ Sbjct: 487 MIKEVVGTRKINFEPGSATLDISARDILDELADLLKTCGDIPLEIGGHTDSQ---GRESM 543 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 N +LS DRA S L V R+ ++ G+ + +D NRRI+ + Sbjct: 544 NQQLSRDRAQSVLDALRGRRV-PVRMYEVKGYGEAQPIADNDTEEGREANRRIEFKLLID 602 Query: 342 Q 342 + Sbjct: 603 E 603 >gi|28199574|ref|NP_779888.1| OmpA family protein [Xylella fastidiosa Temecula1] gi|28057689|gb|AAO29537.1| OmpA family protein [Xylella fastidiosa Temecula1] Length = 242 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 L G+ + I +++ D FD S+ P+ L+ + Sbjct: 91 NYQDRQERALRERTANTGIDVKRDGDNITLNLPDGIT---FDFGKSMLKPQFYGALKNVA 147 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L + +I + G+TD+ N RLS DRA + L GV +R+ +ISG Sbjct: 148 STLREYNQTMIEVVGYTDSI---GSDVVNQRLSEDRAGAVASYLAAQGVQRERM-EISGM 203 Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338 + NRR++I + Sbjct: 204 GKRYPIADNSTEAGRSKNRRVEIHL 228 >gi|126664115|ref|ZP_01735108.1| putative flagellar motor protein MotB [Flavobacteria bacterium BAL38] gi|126623829|gb|EAZ94524.1| putative flagellar motor protein MotB [Flavobacteria bacterium BAL38] Length = 278 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 82/215 (38%), Gaps = 11/215 (5%) Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 + +++ ++ T L + L L ++ + + + L Sbjct: 50 TEREALASQVDFLKKNNTDLINNMGNLTTLTTKGAENLEKSLESLKEKDLKINRLQDALT 109 Query: 194 DLAKKISSTLSGLVAD--NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + ++ L + + + I+ISI D +F S + V Sbjct: 110 KKDSVTLALVTSLKREVGIDDPDININVEKGVIMISIADNL---LFKSGSYEVSDKAKGV 166 Query: 252 LQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL-MKSGVSEDR 308 L K+ +V+ + + GHTD P +N DNW LS+ RA S +VL + GV+ + Sbjct: 167 LAKVAKVINSKPDFECMVEGHTDNVPIKNAVLLDNWDLSVKRATSIVRVLHKELGVNPKQ 226 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + G + + + +D + NRR I++ + Sbjct: 227 LIPA-GRSSYIPLVENDSPANRAKNRRTKIIIMPK 260 >gi|104780138|ref|YP_606636.1| OmpA family outer membrane protein [Pseudomonas entomophila L48] gi|95109125|emb|CAK13822.1| putative outer membrane protein, OmpA family [Pseudomonas entomophila L48] Length = 239 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 50/147 (34%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A GV + I + + F S+ P L + Sbjct: 87 DKQEAELRAKMANTGVEVQRQGDQIKLIM---PGNITFATDSANISPSFYSPLNNLANSF 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I + G TD++ + N LS RA + L GV R+ + G Sbjct: 144 KQFNQNTIEVVGFTDST---GSRQHNMDLSQRRAQAVSTYLTSQGVDASRV-TVRGMGPD 199 Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343 + ++ + NRR+++ ++ G Sbjct: 200 QPIASNADANGRAQNRRVEVNLKPIPG 226 >gi|269102083|ref|ZP_06154780.1| outer membrane protein A precursor [Photobacterium damselae subsp. damselae CIP 102761] gi|268161981|gb|EEZ40477.1| outer membrane protein A precursor [Photobacterium damselae subsp. damselae CIP 102761] Length = 317 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 9/138 (6%) Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLAHST 263 V + + +++ + F S+ L + L Sbjct: 167 AYHWGAPAPVVAEPVYVDQVSVETLEELKLAVPFAFDSTELSAGDRAKLAPFEQRLQAQD 226 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK 321 I + G+TD+ N +LS+ RA + + L V RI G Sbjct: 227 AAQIYVVGYTDSR---GSEAYNQKLSVKRADAVAEALRSVMNVDGSRIIA-EGRGESNPV 282 Query: 322 IASDPM--NSANRRIDIL 337 ++D + NRR++I+ Sbjct: 283 ASNDTAEGRAQNRRVEII 300 >gi|242279943|ref|YP_002992072.1| peptidoglycan-associated lipoprotein [Desulfovibrio salexigens DSM 2638] gi|242122837|gb|ACS80533.1| peptidoglycan-associated lipoprotein [Desulfovibrio salexigens DSM 2638] Length = 196 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 7/177 (3%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 S + E+ P +E++ + ++L+ + L + + + Sbjct: 23 SKKQVESSPASPAVEERMAQQQENEQLKSEEQARLERERALQEQALEEERQAAAAKKEFD 82 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDN 284 ++++ N FD S E +LQ+ E+L V + G+ D N Sbjct: 83 NAVVELGNMVHFDFDSFEIKQEYRPLLQQKAEILKKYDNVTMVIEGYCDDR---GTEEYN 139 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 L RA +AY+ L+ GV+ +R+S +S F ++ + NRR + Sbjct: 140 LALGERRARAAYEFLILLGVTPERLSIVS-FGEEDPLDPGQNETAWAKNRRAQFRLT 195 >gi|49082800|gb|AAT50800.1| PA2900 [synthetic construct] Length = 270 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 96/271 (35%), Gaps = 12/271 (4%) Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 M +F + ++ + K + + ++ I + Sbjct: 1 MPGKATLFATLLACAALAGCADHKLSEQSLAKAQSEFDQVKEDSDVLRAAPKDVIRAGES 60 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DL 195 ++E + S+ + S + + L ++ + + +L Sbjct: 61 LARAERLSSYWGSSSDVIQYAYLSQRYSEIARQHALLNLNQERLTRLQLERERLQLALRE 120 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 AK +S G + + E T G+++++ D +FD + + P K+ Sbjct: 121 AKLLSVQEQGQRLSEEIASLSTEETERGLVLTLGD----VLFDFNRAELKPAANRTALKL 176 Query: 256 GEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + L + VI I G+TD+ + N LS +RA + VL GV R+ ++ G Sbjct: 177 VQFLQLNPRRVIRIEGYTDSV---GDRQANLDLSRERAQAVADVLADLGVDPARM-QVVG 232 Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQG 343 + + + NRR++I+ + +G Sbjct: 233 YGEAFPVTDNASNRGRAQNRRVEIVFSNDKG 263 >gi|163786302|ref|ZP_02180750.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein-like protein [Flavobacteriales bacterium ALC-1] gi|159878162|gb|EDP72218.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein-like protein [Flavobacteriales bacterium ALC-1] Length = 524 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 64/154 (41%), Gaps = 12/154 (7%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ----RNTPMFDKSSSIPLPE 247 L+ + +S + + + ++ + N +FD S+ P+ Sbjct: 373 LKAIKFHMSGFKEEGKERLFISNLKISEGGEDLRRKLMSEGKISTNGILFDSGSANIQPQ 432 Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVS 305 ++ ++++I +VL + +I GHTDA N +LS RA + VL+ +S Sbjct: 433 SLGIVRQISQVLMQDESIKLNIIGHTDAD---GPDDANLKLSKARAAAVKDVLINIYKIS 489 Query: 306 EDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 DR++ G + + + + NRR++ + Sbjct: 490 ADRLTT-DGKGETQPVGDNKTTDGKAQNRRVEFV 522 >gi|238798361|ref|ZP_04641844.1| Inner membrane lipoprotein yiaD [Yersinia mollaretii ATCC 43969] gi|238717819|gb|EEQ09652.1| Inner membrane lipoprotein yiaD [Yersinia mollaretii ATCC 43969] Length = 219 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SS P L + Sbjct: 80 YMDVQEAKLREKMSGTGVSVTRQGDNIVLNM---PNNVTFDTDSSNLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G TD+ N LS RA S L+ GV+ +RI + SG Sbjct: 137 VLKEYDKTAVNVTGFTDS---SGARAHNMTLSQQRADSVGSALIVQGVAANRI-RTSGAG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PDNPVASNSTAAGKAQNRRVEITL 216 >gi|163757275|ref|ZP_02164371.1| OmpA/MotB [Kordia algicida OT-1] gi|161322760|gb|EDP94113.1| OmpA/MotB [Kordia algicida OT-1] Length = 617 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 10/120 (8%) Query: 225 LISIIDQ---RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNI 280 +++I D FD SS +L I L + I GH D+ Sbjct: 497 VVTIPDPAVGERKVYFDFDSSKLDQNAKEILDNIAANLKNDAGYNISIIGHADSR---GT 553 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 R N +LS++RA + L +S I I+G + + NRR+++++ Sbjct: 554 DRYNDKLSVERAQAIKNYLDSKKLSNSNI-TITGKGESAPIAPNTTPEGRAKNRRVELII 612 >gi|197105040|ref|YP_002130417.1| outer membrane protein [Phenylobacterium zucineum HLK1] gi|196478460|gb|ACG77988.1| outer membrane protein [Phenylobacterium zucineum HLK1] Length = 190 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 8/118 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDN 284 ++ ++ F PE L ++ E L + + I+GHTD++ N Sbjct: 77 QVVLSDDSVKFPVDRHALSPEAEARLNELAERLKSENRNVYLEIQGHTDST---GPEAYN 133 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 +L RA + + L K+GV+ +R+ IS + ++D + NRR++I+V Sbjct: 134 DQLGEARAEAVRKHLAKAGVALNRMGTIS-YGEEAPVASNDTAEGRAQNRRVEIIVLS 190 >gi|86141593|ref|ZP_01060139.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Leeuwenhoekiella blandensis MED217] gi|85832152|gb|EAQ50607.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Leeuwenhoekiella blandensis MED217] Length = 224 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 17/156 (10%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 K++ A++I + G + + G++ D+ + F + + Sbjct: 70 KKMDKQAQRIEEEIPGAEVERVDDGIVVN----------FDENSGVYFATNKYNINSASQ 119 Query: 250 VVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L + V+ + + GHTD++ A N LS +RA + L+ G++ R Sbjct: 120 ETLNGLSRVMQEYPQTNVLVVGHTDST---GSADYNMTLSKNRAQAVTNYLVSQGIASGR 176 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + + + K ++ NRR+ + + Q Sbjct: 177 FTT-QWYGEEQPKYTNETAEGRSKNRRVTLAIVPNQ 211 >gi|71901865|ref|ZP_00683927.1| OmpA/MotB [Xylella fastidiosa Ann-1] gi|71728370|gb|EAO30539.1| OmpA/MotB [Xylella fastidiosa Ann-1] Length = 241 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 L G+ + I +++ D FD S+ P+ L+ + Sbjct: 90 NYQDRQERALRERTANTGIDVKRDGDNITLNLPDGIT---FDFGKSMLKPQFYGALKNVA 146 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L + +I + G+TD+ N RLS DRA + L GV +R+ +ISG Sbjct: 147 STLREYNQTMIEVVGYTDSI---GSDVVNQRLSEDRAGAVASYLAAQGVQRERM-EISGM 202 Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338 + NRR++I + Sbjct: 203 GKRYPIADNSTEAGRSKNRRVEIHL 227 >gi|300775912|ref|ZP_07085772.1| OmpA family protein [Chryseobacterium gleum ATCC 35910] gi|300505462|gb|EFK36600.1| OmpA family protein [Chryseobacterium gleum ATCC 35910] Length = 277 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 10/165 (6%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + + L +S+ L + + + V + + ++IS+ D+ ++ Sbjct: 103 KQLISSNAKNDSLNLALSNKLKRSLDNVSDEDVQVKVLKGVVMISLSDKM---LYKTGDY 159 Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVL 299 LP VL K+ +V+ + I G+TD +P + RDNW LS R S +VL Sbjct: 160 NILPAAQEVLGKVAKVINDYDKYSVLIEGNTDNAPLNSPNLPRDNWDLSALRGTSVAKVL 219 Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 GV RI+ G + + K + + NRR +I++ + Sbjct: 220 QTQFGVDPARITAG-GRSEYNPKATNMSVSGRAENRRTEIIIMPK 263 >gi|114764496|ref|ZP_01443721.1| flagellar motor protein [Pelagibaca bermudensis HTCC2601] gi|114543063|gb|EAU46082.1| flagellar motor protein [Roseovarius sp. HTCC2601] Length = 634 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 88/248 (35%), Gaps = 16/248 (6%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 + ++ T + + + + E + ++ +++ Sbjct: 388 SEARSELSQTEARASEAERQRELLNQQVAALRSQLSQLQGLLDEARESDAEAQVQLQNLG 447 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 E N L ++ E+ + ++ + + + L ++ + + GI I Sbjct: 448 SELNAALARVAAEERRRRQLEEEERRRLEAQAEDLERYRSEFFGRLREVIGDQDGIRIEG 507 Query: 229 IDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--------EVISIRGHTDASP-- 276 + +F + P + I +L ++ + GHTD +P Sbjct: 508 DRFVFSSEVLFAPGEARLSPLGEGEIANIAGILQRVMSDIPPGIDWILRVDGHTDDTPLR 567 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333 DNW LS RA S + L++ G+ R+S +GF ++ +D + NRR Sbjct: 568 PGARFADNWELSQARALSVVRFLVEDMGIPPQRLSA-NGFGEYQPVDPADSPEARAQNRR 626 Query: 334 IDILVEDR 341 I++ + +R Sbjct: 627 IELKLTER 634 >gi|254469405|ref|ZP_05082810.1| OmpA family protein [Pseudovibrio sp. JE062] gi|211961240|gb|EEA96435.1| OmpA family protein [Pseudovibrio sp. JE062] Length = 473 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 73/199 (36%), Gaps = 14/199 (7%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 T + ++ +++ P S ++ Q ++ +++ + + Sbjct: 281 TSPIDLTHQPAPPRAALPNLPQQQATPGTPGSPSSPQVVRSSTAYQQISAFLATEIQQGL 340 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 V+ ++I + + MF + I V+ ++ E L I+ Sbjct: 341 -------VVVMNANGNVVIRLT---GSGMFATARDTLTARFIPVVNRVAEALNTRPGRIN 390 Query: 268 IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + G++D P RN R+N LS RA + ++ ++R+ I G ++ Sbjct: 391 VVGYSDNIPIRNAQFRNNVALSKARAQTVADLIKVRLTDKNRVRAI-GRGSADPIASNAT 449 Query: 327 M--NSANRRIDILVEDRQG 343 + NRRIDI + G Sbjct: 450 AEGRAQNRRIDITLIPSTG 468 >gi|283786451|ref|YP_003366316.1| T6SS protein Cts1O [Citrobacter rodentium ICC168] gi|282949905|emb|CBG89530.1| T6SS protein Cts1O [Citrobacter rodentium ICC168] Length = 594 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 8/107 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAY 293 P+F SS +P++ L I V+ S E I GH+D++ A N LS RA Sbjct: 488 PLFANGSSNLMPDSEKTLLTIVPVIRRSPEKTFLIIGHSDST---GSAATNMALSAARAQ 544 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 + L+ G+ + G R +D + NRR++I+ Sbjct: 545 VIKEWLVAHTGLPAGQFIT-EGAGDTRPIANNDTKEGRAQNRRVEII 590 >gi|255533625|ref|YP_003093997.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366] gi|255346609|gb|ACU05935.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366] Length = 679 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 56/149 (37%), Gaps = 16/149 (10%) Query: 205 GLVADNIVKGVLFETTRTGILISIIDQR---NTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 D + + + ++ ID+ +++ + + ++ L + ++ Sbjct: 535 SFSYDQLAQKDTLFSPELCLIPYEIDKPIVLKDVLYEFNKADLTEDSKGKLDYLYTIMVD 594 Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + I + HTD+ + N LS RA S L+ G+ ++R++ G+ R Sbjct: 595 NPTIEIELSSHTDS---KGGEAYNMDLSERRAKSCVDYLIGKGIPKNRMTS-KGYGKTRP 650 Query: 321 KIASD--------PMNSANRRIDILVEDR 341 ++ + NRR + V + Sbjct: 651 IAPNEFPNGKDNPAGRALNRRTEFKVTKK 679 >gi|240145494|ref|ZP_04744095.1| putative chemotaxis protein MotB [Roseburia intestinalis L1-82] gi|257202309|gb|EEV00594.1| putative chemotaxis protein MotB [Roseburia intestinalis L1-82] Length = 267 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 77/227 (33%), Gaps = 9/227 (3%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 ST ++++++ + + + G + D Sbjct: 36 STVDAEKFEKMVASFQNTFSILPNGGSSIGDGTLISSGVSQLEMLDSYYKDKANSETDQE 95 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + ++ +++ L++ K + I V + +++++ + Sbjct: 96 TDEENDVVEEYKEQALEESEKMSEQLEDAIARYGIQDQVEVDFNAQYVMLNMN---GALL 152 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI-ARDNWRLSLDRAYS 294 FD + E ++ K+G+++ +I + GHTD P + DN LS RA + Sbjct: 153 FDSGHAEIRSEAYPLIDKLGKLIEPYQDNIIEVEGHTDNVPIHSAKYEDNDVLSFYRARA 212 Query: 295 AYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 L + V + SG + + S NRR+ I + Sbjct: 213 VTDYLRDITTVEPAHLKA-SGRGEYVPVADNTTQEGRSRNRRVIIKI 258 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 45/140 (32%), Gaps = 1/140 (0%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 D P +W +AD M +L+ FF++++ ++ D + + + F L Sbjct: 2 KRKPDEPKGSPAWMNTFADLMNLLLCFFVLLFSMSTVDAEKFEKMVASFQNTFSILPNGG 61 Query: 81 KGIFDEQNPPERSSQ-NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 I D SQ +D + + + ++Y+ + Q Sbjct: 62 SSIGDGTLISSGVSQLEMLDSYYKDKANSETDQETDEENDVVEEYKEQALEESEKMSEQL 121 Query: 140 SEHCKNSLTRDSEKGKDLCK 159 + +D + + Sbjct: 122 EDAIARYGIQDQVEVDFNAQ 141 >gi|192362185|ref|YP_001983947.1| OmpA domain-containing protein [Cellvibrio japonicus Ueda107] gi|190688350|gb|ACE86028.1| OmpA domain protein [Cellvibrio japonicus Ueda107] Length = 349 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD + S P+ + ++K+ + L + ++ GHTD+ A N RLS RA + Sbjct: 237 LFDTAKSEVKPQYLPQVKKLADALTQYENTVVTVEGHTDSQ---GSAAFNKRLSQQRADA 293 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRI--DILVE 339 L++ G++ DR++ + G+ R + + NRR+ ++ V+ Sbjct: 294 VKAALVEKFGIAADRVTAV-GYGLERPIANNATAEGRAQNRRVVGEVSVK 342 >gi|126741131|ref|ZP_01756812.1| hypothetical protein RSK20926_01427 [Roseobacter sp. SK209-2-6] gi|126717768|gb|EBA14489.1| hypothetical protein RSK20926_01427 [Roseobacter sp. SK209-2-6] Length = 346 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 7/143 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 ++S + F I+ + + F +S ++I L + ++++ Sbjct: 208 QSVSSGATAALEVEGNFNREACVGRFEILSRSRSVNFAPGTSRLDGKSISFLDSLYDIVS 267 Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 E +I + GHTD + N RLS RA S + L G+ +R+ G+ Sbjct: 268 RCPELIIEVGGHTDD---KGSEAANIRLSQKRANSVVRYLAGKGIQTERLVA-QGYGEAS 323 Query: 320 LKIASDPM--NSANRRIDILVED 340 + + + NRRI +V++ Sbjct: 324 PLVPNTSAANRAKNRRITFVVQN 346 >gi|172065635|ref|YP_001816347.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6] gi|171997877|gb|ACB68794.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 231 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + L + E + +I G+TD++ A N +LS RA S Sbjct: 130 FDTDKSTLKTDARDKLDVLIEAAHGTPFKTVTISGYTDST---GTAEHNQQLSQRRAQSV 186 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 Q L + G+S + + G+ + ++ + NRR+DI +E Sbjct: 187 AQYLREHGLSAQKFD-VRGYGENNPVASNATPAGRAKNRRVDITLE 231 >gi|115378368|ref|ZP_01465532.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1] gi|115364644|gb|EAU63715.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1] Length = 494 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYS 294 F I L E+ +L+++ ++L E+ + GHTD+ + N LS RA S Sbjct: 355 FATDQDILLSESWPILEEVSQMLKTHPEIKRLLVEGHTDSR---SSDEYNLELSRRRAAS 411 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342 L +SGV +R+ GF R ++ + NRR++ V Sbjct: 412 IRVYLEESGVESERLCS-QGFGRSRPVADNKNEEGMALNRRVEFTVLPPP 460 >gi|91776019|ref|YP_545775.1| OmpA/MotB [Methylobacillus flagellatus KT] gi|91710006|gb|ABE49934.1| OmpA/MotB [Methylobacillus flagellatus KT] Length = 214 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 16/152 (10%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 KR+++ +++ + + +T + +SI F + P Sbjct: 69 KRMEEQKRQMEEATKDTGVE------VSQTEDNQLKLSIPSD---ISFASGKADIEPNFR 119 Query: 250 VVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 VVL L ++ ++I GHTD + N LS++RA + L+ G++ R Sbjct: 120 VVLDNFATTLKNNPNTLVTIIGHTDNT---GSDAINNPLSVNRAANTRDYLIARGIAASR 176 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILV 338 I G +++D + NRR++I V Sbjct: 177 F-TIDGRGSREPLVSNDTPANRAKNRRVEIFV 207 >gi|15598096|ref|NP_251590.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|116050903|ref|YP_790274.1| putative outer membrane protein precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|218890901|ref|YP_002439767.1| putative outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|254235886|ref|ZP_04929209.1| hypothetical protein PACG_01830 [Pseudomonas aeruginosa C3719] gi|254241564|ref|ZP_04934886.1| hypothetical protein PA2G_02265 [Pseudomonas aeruginosa 2192] gi|296388613|ref|ZP_06878088.1| putative outer membrane protein precursor [Pseudomonas aeruginosa PAb1] gi|313108050|ref|ZP_07794215.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] gi|9948992|gb|AAG06288.1|AE004716_6 probable outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|115586124|gb|ABJ12139.1| putative outer membrane protein precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|126167817|gb|EAZ53328.1| hypothetical protein PACG_01830 [Pseudomonas aeruginosa C3719] gi|126194942|gb|EAZ59005.1| hypothetical protein PA2G_02265 [Pseudomonas aeruginosa 2192] gi|218771126|emb|CAW26891.1| probable outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|310880717|gb|EFQ39311.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] Length = 269 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 96/271 (35%), Gaps = 12/271 (4%) Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 M +F + ++ + K + + ++ I + Sbjct: 1 MPGKATLFATLLACAALAGCADHKLSEQSLAKAQSEFDQVKEDSDVLRAAPKDVIRAGES 60 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DL 195 ++E + S+ + S + + L ++ + + +L Sbjct: 61 LARAERLSSYWGSSSDVIQYAYLSQRYSEIARQHALLNLNQERLTRLQLERERLQLALRE 120 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 AK +S G + + E T G+++++ D +FD + + P K+ Sbjct: 121 AKLLSVQEQGQRLSEEIASLSTEETERGLVLTLGD----VLFDFNRAELKPAANRTALKL 176 Query: 256 GEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + L + VI I G+TD+ + N LS +RA + VL GV R+ ++ G Sbjct: 177 VQFLQLNPRRVIRIEGYTDSV---GDRQANLDLSRERAQAVADVLADLGVDPARM-QVVG 232 Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQG 343 + + + NRR++I+ + +G Sbjct: 233 YGEAFPVTDNASNRGRAQNRRVEIVFSNDKG 263 >gi|325914015|ref|ZP_08176371.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas vesicatoria ATCC 35937] gi|325539784|gb|EGD11424.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas vesicatoria ATCC 35937] Length = 241 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 10/149 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + L G+ + I +++ D FD S P+ L Sbjct: 85 AAVGQYQDRQERALRERTANTGIDVQRQGDNITLNLPDGIT---FDFGKSALKPQFYSAL 141 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + L + ++ + GHTD+ N RLS +RA + Q L GV +R+ Sbjct: 142 NGVASTLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERAGAVAQYLTAQGVQRERMET 198 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338 + G + + NRR++I + Sbjct: 199 M-GAGKRYPIADNSTDAGRAQNRRVEIRL 226 >gi|320182433|gb|EFW57330.1| Putative outer membrane lipoprotein [Shigella boydii ATCC 9905] Length = 550 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + + + V + + + +FD + + VL Sbjct: 399 EHIRQPVLRAIRDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 453 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + + G+TDA+ + N +LSL RA + ++++ Sbjct: 454 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + G + +D + NRR++I + R Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542 >gi|257453597|ref|ZP_05618887.1| OmpA/MotB [Enhydrobacter aerosaccus SK60] gi|257449055|gb|EEV24008.1| OmpA/MotB [Enhydrobacter aerosaccus SK60] Length = 385 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 10/128 (7%) Query: 214 GVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269 V+ + I I D + FD ++ + +QK+ E + SI Sbjct: 240 NVVVDADGCPREIPIDDALRMELRVFFDNDKTVIKDQYKPEIQKVAEKMNEYPNSTASIE 299 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328 GH + AR N RLS RA + +L+ GV+ RIS + G+ + R ++ Sbjct: 300 GHASKTGP--SARYNQRLSEARANAVKSMLVNQFGVAPQRISTV-GYGYDRPIADNNTAE 356 Query: 329 SA--NRRI 334 NRR+ Sbjct: 357 GRAMNRRV 364 >gi|167564292|ref|ZP_02357208.1| ompA family protein [Burkholderia oklahomensis EO147] Length = 243 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 81/246 (32%), Gaps = 18/246 (7%) Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR--------DSEK 153 + + G + L + + N + + Sbjct: 1 GATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEVGDVATPPNW 60 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 ++ K + + + + + + + Q LA +++ L+ I Sbjct: 61 STNVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKN 118 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272 G+ + G+L + R F+ S+ P+ +L ++ LA + I GHT Sbjct: 119 GLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHT 177 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330 D N LS RA + L+ G++ +++ +G + ++D + Sbjct: 178 DN---SGNRASNIALSQARADAVKGYLVAKGIASQQLTT-TGVGPDQPIASNDTNDGRAR 233 Query: 331 NRRIDI 336 NRRI+ Sbjct: 234 NRRIEF 239 >gi|149919600|ref|ZP_01908079.1| OmpA domain protein [Plesiocystis pacifica SIR-1] gi|149819543|gb|EDM78971.1| OmpA domain protein [Plesiocystis pacifica SIR-1] Length = 458 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 7/140 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + L S+ F+ ++I L++ EVL Sbjct: 312 EPEDRNGFLDDDGCPDEVPEELTSLSGIMQGVNFETDKDTITKDSIPQLEQAAEVLNRFP 371 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + I GHTD+ + N LS RA + + L+ +GV R+ G Sbjct: 372 DLRVEISGHTDSR---GGYQHNMDLSRRRAEAVKKWLVDNGVDGSRLET-RGAGPDEPID 427 Query: 323 ASDPMNSA--NRRIDILVED 340 +D NRRI+ + Sbjct: 428 TNDTSAGRFNNRRIEFTILG 447 >gi|259416340|ref|ZP_05740260.1| OmpA family protein [Silicibacter sp. TrichCH4B] gi|259347779|gb|EEW59556.1| OmpA family protein [Silicibacter sp. TrichCH4B] Length = 784 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 98/309 (31%), Gaps = 19/309 (6%) Query: 50 VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 ++ + A + A +Q A K F QN E+ + + + Sbjct: 478 LLVALEALERAQAAATDQEVLQSRLLAALAEKDDF-AQNLTEQKTLAEQRADLLAQARSA 536 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL--TRDSEKGKDLCKSTDLEKSI 167 + K S +++ L + L RD+ +G L + Sbjct: 537 LAEEKQVSEEARRETALLNQQVAALREQLGGLQALLDDFKERDAAQGIQLQSLGQDLNTA 596 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + KR + ++ + L ++ + + G+ I Sbjct: 597 LARAAAEERRRRILEEQERKRLEAERERLANEAKDLEQYRSEFFGQLRSLLGDQEGVRIE 656 Query: 228 IIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASPF 277 + +F S+ + K+ +L +I + GHTD F Sbjct: 657 GDRFVFASEVLFALGSAELSEAGKTEIAKVARILQNVAAAIPDDINWIIRVDGHTDNQRF 716 Query: 278 RNI--ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANR 332 DNW LS RA S + +M G+ R+ +GF + +D + NR Sbjct: 717 SGTGKYADNWELSQGRALSVVRYMMDELGIPPGRL-AANGFGEFQPVNPADTPEARAQNR 775 Query: 333 RIDILVEDR 341 RI++ + +R Sbjct: 776 RIELKLTER 784 >gi|91781366|ref|YP_556573.1| putative flagellar motor protein (MotB) [Burkholderia xenovorans LB400] gi|91694026|gb|ABE37223.1| putative flagellar motor protein (MotB) [Burkholderia xenovorans LB400] Length = 230 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 8/166 (4%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 +K+ + + LS L + T + I+I + +F Sbjct: 68 PAKQAVDLQPFAASAAARNEAGKQLLSLLAPLRDNHRITISQTPQAVEIAINAR---ILF 124 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295 + + LPE+ VLQ+I VL I + GHTD+ P NW LS RA + Sbjct: 125 NSGDARLLPESFAVLQQIAAVLRDRAKNNILVEGHTDSLPISTAKYESNWELSSARAGAV 184 Query: 296 YQVLMKSGVSEDRISKISGFAHHRL-KIASDP-MNSANRRIDILVE 339 + G+ R++ I G A + I +D N+ANRR+ ILVE Sbjct: 185 VRFFADRGIEGHRMAAI-GRADNFPLIIGNDAVANAANRRVTILVE 229 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + D+ + W I YAD +T LM FL ++++ + + +P + Sbjct: 17 RDESHDSGAHPDRWLISYADLITTLMVLFLALYVLELAKNSELQITTLQHHPAKQA 72 >gi|254465245|ref|ZP_05078656.1| OmpA/MotB [Rhodobacterales bacterium Y4I] gi|206686153|gb|EDZ46635.1| OmpA/MotB [Rhodobacterales bacterium Y4I] Length = 219 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 68/219 (31%), Gaps = 10/219 (4%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 Q + I + + ++ + + + Sbjct: 3 QMKLTTAGIVAAALGLSACTDPATVGTPGSNTQKGAVLGGIIGAGVGAIANDSDRGLGAA 62 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 A+ + ++ + L + T +++S + F S+ Sbjct: 63 TGALVGAAAGSVIGNQLDAQERELRQTLANDSITIVNTGDRLILSFPNDLT---FATDSA 119 Query: 243 IPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 P L+++ + L I + GHTD+ A N LS RA + + Sbjct: 120 AVAPAVQADLRRVADSLVRYPNSAIQVIGHTDSD---GDAGYNQGLSERRANAVASHIQA 176 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 GV R+ +I G + ++ + NRR++++V Sbjct: 177 GGVPYHRM-RIIGRGESQPVASNLTPEGKARNRRVEVVV 214 >gi|261342420|ref|ZP_05970278.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316] gi|288315055|gb|EFC53993.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316] Length = 606 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 8/112 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 P+F SS +P++ L + + S E + I GH+D++ A N LS +RA Sbjct: 489 PLFANGSSTLMPDSEKTLLAVVPAIRRSPEKMFLIVGHSDST---GSAATNLALSAERAQ 545 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L+ G+ ++ G R +D + NRR++I+ RQ Sbjct: 546 VIKEWLVAHTGLPAEQFIT-EGAGDTRPVANNDTKDGRAQNRRVEIIPLSRQ 596 >gi|107102449|ref|ZP_01366367.1| hypothetical protein PaerPA_01003511 [Pseudomonas aeruginosa PACS2] Length = 269 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 96/271 (35%), Gaps = 12/271 (4%) Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 M +F + ++ + K + + ++ + + Sbjct: 1 MPGKATLFATLLACAALAGCADHKLSEQSLAKAQSEFDQVKEDSDVLRAAPKDVVRAGES 60 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DL 195 ++E + S+ + S + + L ++ + + +L Sbjct: 61 LARAERLSSYWGSSSDVIQYAYLSQRYSEIARQHALLNLNQERLTRLQLERERLQLALRE 120 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 AK +S G + + E T G+++++ D +FD + + P K+ Sbjct: 121 AKLLSVQEQGQRLSEEIASLSTEETERGLVLTLGD----VLFDFNRAELKPAANRTALKL 176 Query: 256 GEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + L + VI I G+TD+ + N LS +RA + VL GV R+ ++ G Sbjct: 177 VQFLQLNPRRVIRIEGYTDSV---GDRQANLDLSRERAQAVADVLADLGVDPARM-QVVG 232 Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQG 343 + + + NRR++I+ + +G Sbjct: 233 YGEAFPVTDNASNRGRAQNRRVEIVFSNDKG 263 >gi|269104382|ref|ZP_06157078.1| outer membrane protein A precursor [Photobacterium damselae subsp. damselae CIP 102761] gi|268161022|gb|EEZ39519.1| outer membrane protein A precursor [Photobacterium damselae subsp. damselae CIP 102761] Length = 335 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS L + L I + G+TD+ + N +LS RA + Sbjct: 220 FAFDSSSISTGDAAKLVPFEQRLQEQDAAQIYVVGYTDS---KGSEAYNQKLSERRADAV 276 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L V RI G ++ + NRR++I+ Sbjct: 277 ADALRAHLNVDGSRIIA-EGRGEADPVASNQTEEGRAQNRRVEIV 320 >gi|167590675|ref|ZP_02383063.1| hypothetical protein BuboB_35381 [Burkholderia ubonensis Bu] Length = 394 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 7/162 (4%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 +++I A+ R A + L + V + ++ R MF Sbjct: 235 EKQIAAIGRMTPPPPPAAPALRLAALLRNEIAAGTVSVDEDARHSTVTF---RGDAMFPP 291 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQV 298 + + ++ KI +A +++ G+TD +P R A N LS RA Q+ Sbjct: 292 GKAAVNASSGPLIAKIAAEIARVPGKVTVLGYTDNAPVRGSAFPSNEALSDARATQVMQM 351 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 L +GV +R+ G + + NRR++I V Sbjct: 352 LQAAGVPANRL-AALGKGAANPIGDNRTVPGRALNRRVEITV 392 >gi|116872075|ref|YP_848856.1| chemotaxis (flagellar motor rotation) protein MotB [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740953|emb|CAK20073.1| chemotaxis (flagellar motor rotation) protein MotB [Listeria welshimeri serovar 6b str. SLCC5334] Length = 275 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 91/232 (39%), Gaps = 11/232 (4%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 S+ K+++++ N + + + ++ +K+++ Sbjct: 37 ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKGKGPDDPNVNAVLKAMDEQDKKKDAN 96 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 +K+ A+ +K+ + + S + A+ + + + + G+LI+I D Sbjct: 97 EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAERLGAKMTTKYSDEGLLITIRDD--- 153 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291 +F S+ + ++IGE+ A + + GHTD P NW LS+ R Sbjct: 154 ILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 213 Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 A + + +++ V+ S G+ R +D NRR++I+V Sbjct: 214 AVNFMEAIIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 264 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 69/209 (33%), Gaps = 1/209 (0%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ + +W I Y+D +T+L+A F+V++ ++ D + + F + Sbjct: 3 KRRKKPHEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 ++ + P+ + N + ++DE K + + + + +N + + Sbjct: 63 GNQAYVSKGKGPDDPNVNAVLKAMDEQDKKKDANEQEKAKKAAAALLKKQNEEKIEAFKK 122 Query: 139 QSEHCKNSLT-RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q + + K + + + L+ K K L K Sbjct: 123 QIDSYIAAERLGAKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAKEIGELFAQGK 182 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILI 226 + DN+ ++ + + Sbjct: 183 GTMEGIVSGHTDNVPISTSIYSSNWELSV 211 >gi|107024166|ref|YP_622493.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|105894355|gb|ABF77520.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] Length = 247 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 78/240 (32%), Gaps = 16/240 (6%) Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 +T + + + Q T ++ + +T S N + Sbjct: 10 APPPANATPGQVVVGGKVPDEATKAAVLQKLRDTYGATNVVDQVEVGDVATPPNWSANVQ 69 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISII 229 + K +++ + + +A ++ + T + G+ +S Sbjct: 70 KLLGAQLKQISKGQLKINGTQIEMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSAS 129 Query: 230 DQ--------RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280 +Q T F+ S+ P+ ++L ++ LA I GHTD Sbjct: 130 EQGVLDQTLANRTIEFETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDN---SGN 186 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 N LS RA + L+ + +++ +G + +D + NRRI+ V Sbjct: 187 RTSNIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQPIAPNDMADGRARNRRIEFRV 245 >gi|312884493|ref|ZP_07744197.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122] gi|309367805|gb|EFP95353.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122] Length = 222 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 64/209 (30%), Gaps = 11/209 (5%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +Q+ +S + + + ++ I A Sbjct: 18 QATQRQNATTGQDETNSTTQGAIIGAIAGAAIGLATGDNAKERRNQALIGAAGGAAVGGG 77 Query: 195 LAKKISSTLSGLVADNIVKGVLFETT-RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + + L + + GV E T + + + + F SS L+ Sbjct: 78 IGYYFDQQEAALRKELLNSGVQVERTGENQLRLRMENGIG---FSSGSSTLDNSIHKTLR 134 Query: 254 KIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + +L E + G+TD++ R N LS RA S L+ GV+ R Sbjct: 135 GVARILVEYPETSLVIEGNTDST---GSDRTNQILSEKRAESVRGYLVGQGVAPGRAVS- 190 Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVE 339 G + + NRR++I + Sbjct: 191 RGLGERQPICTNSTKEGRACNRRVEIKIL 219 >gi|322417908|ref|YP_004197131.1| OmpA/MotB domain-containing protein [Geobacter sp. M18] gi|320124295|gb|ADW11855.1| OmpA/MotB domain protein [Geobacter sp. M18] Length = 169 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 8/117 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 + +++ F + P + I ++ + + GHTD N + Sbjct: 56 VQNEKGPIKFKTGKAEVDPACDRTMTAIAAIMTDYPGFHVQVDGHTDNV---GKPEANMK 112 Query: 287 LSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 LS DRA + + L K GV R+S GF + ++ + NRR+D V Sbjct: 113 LSQDRADAVVKYLAEKKGVDAKRLSA-KGFGDTQPIASNKTKAGQAKNRRVDFTVTK 168 >gi|169633791|ref|YP_001707527.1| putative outer membrane lipoprotein [Acinetobacter baumannii SDF] gi|169796445|ref|YP_001714238.1| putative outer membrane lipoprotein [Acinetobacter baumannii AYE] gi|184157625|ref|YP_001845964.1| outer membrane protein [Acinetobacter baumannii ACICU] gi|215483907|ref|YP_002326132.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii AB307-0294] gi|301345916|ref|ZP_07226657.1| OmpA/MotB domain protein [Acinetobacter baumannii AB056] gi|301512888|ref|ZP_07238125.1| OmpA/MotB domain protein [Acinetobacter baumannii AB058] gi|332854748|ref|ZP_08435526.1| OmpA family protein [Acinetobacter baumannii 6013150] gi|332865708|ref|ZP_08436518.1| OmpA family protein [Acinetobacter baumannii 6013113] gi|332874587|ref|ZP_08442488.1| OmpA family protein [Acinetobacter baumannii 6014059] gi|169149372|emb|CAM87256.1| putative outer membrane lipoprotein [Acinetobacter baumannii AYE] gi|169152583|emb|CAP01565.1| putative outer membrane lipoprotein [Acinetobacter baumannii] gi|183209219|gb|ACC56617.1| Outer membrane protein [Acinetobacter baumannii ACICU] gi|213986628|gb|ACJ56927.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii AB307-0294] gi|322507933|gb|ADX03387.1| Putative outer membrane lipoprotein [Acinetobacter baumannii 1656-2] gi|323517525|gb|ADX91906.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715] gi|332727834|gb|EGJ59237.1| OmpA family protein [Acinetobacter baumannii 6013150] gi|332735135|gb|EGJ66217.1| OmpA family protein [Acinetobacter baumannii 6013113] gi|332737225|gb|EGJ68151.1| OmpA family protein [Acinetobacter baumannii 6014059] Length = 255 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++ +L ++ L I GHTD+ A N +LS DRA + Sbjct: 154 FESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDATKNLKLSQDRALAV 210 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ + D +S G + + NRRI+ V Sbjct: 211 KNYLISKNIPADHLST-EGLGSSKPVADNTSAEGRKKNRRIEFTVL 255 >gi|126668189|ref|ZP_01739150.1| OmpA/MotB [Marinobacter sp. ELB17] gi|126627338|gb|EAZ97974.1| OmpA/MotB [Marinobacter sp. ELB17] Length = 465 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 107/296 (36%), Gaps = 15/296 (5%) Query: 60 DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119 + A+ N A I + +++ L+ ++ + N Sbjct: 157 QRRDALTSDLNAALAKQGDAQNQIDELTTQLTQATGQADTLTQQRDDLTATLTATQSAAN 216 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 ++ + ++ + ++ + L +T+ +S+ ++ L+ Sbjct: 217 AQQTDAQNRIAELEKQLAEANAALADARQEVRQHQSALASATEQRQSVAEQYQQAREQLA 276 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ------RN 233 ++ + + + L +++ + + + ++ + D Sbjct: 277 LQQARSQSATETINVLEARMAQE-KAATDNLQSRLQSLSHEKESLVSRLEDGTTVIKLPE 335 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR----NIARDNWRLS 288 + +F+ S+ L + + L + ISI+GH+D+ ++ NW LS Sbjct: 336 SIVFNSGSARIGKAGQHTLTLLADALKSFPDHLISIQGHSDSRSIAPALQSLYPTNWELS 395 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-DP-MNSANRRIDILVEDRQ 342 RA SA +VL ++G+ R+ + GFA R + D NRRI++L+ Q Sbjct: 396 ASRAASAVRVLREAGIDPSRMQAV-GFADARPLVKEIDTVSRRKNRRIEVLLYPSQ 450 >gi|325294742|ref|YP_004281256.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065190|gb|ADY73197.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 255 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARD---NWRL 287 N +F +S P+ L K+ E++ + GHT +W L Sbjct: 107 NKVLFKPNSLELTPKAKEALDKVAEIIKKLPGNYQVRIEGHTSIEEPTKYLPYIHDDWDL 166 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 S+ RA + + L+ GV+ +I + G+ + R + + + NRR++I +E Sbjct: 167 SIRRATTVAKYLVSRGVNPKKIIAV-GYGNTRPLYTWKNPILQARNRRVEIYLE 219 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 22/50 (44%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + +W ++D M++L+ FF++++ ++ D YF Sbjct: 3 RKKKEECKTAPAWLTSFSDLMSLLLTFFILLYSMSTLDVTKAIKFLSYFQ 52 >gi|254302748|ref|ZP_04970106.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322940|gb|EDK88190.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 182 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 10/131 (7%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 +GV +++S+ +FD L + + L + + I I G+ Sbjct: 58 EGVTIRREGNNLILSM---PELILFDFDKYAVKDGIKPSLSTLAKALGENKDIHIKIDGY 114 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 TD F N LS+ RA + L+ G I I G+ + Sbjct: 115 TD---FIGTEAYNLDLSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPAATNQTEAGRS 170 Query: 331 -NRRIDILVED 340 NRR++ ++ Sbjct: 171 KNRRVEFIISR 181 >gi|225010858|ref|ZP_03701326.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-3C] gi|225005066|gb|EEG43020.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-3C] Length = 277 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 10/154 (6%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 R + + +L G++ + + + + + +SI D+ +F+ S + + Sbjct: 113 RRDSVNLALVQSLKGVLGNLDDEDIEISVEKGVVFVSISDKL---LFNTGSYVVSNKAKS 169 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKS-GVSED 307 VL+K+ +V+ + + + GHTD F + DNW LS+ RA S ++L K GV Sbjct: 170 VLEKVAKVVNNKPDFEFMVEGHTDERSFSKGDLVDNWDLSVKRATSVVRMLQKDFGVDPK 229 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 R++ G A + S NRR I+V + Sbjct: 230 RMTAA-GRAEYMPV---SSELSKNRRTRIVVLPK 259 >gi|89897844|ref|YP_514954.1| outer membrane protein [Chlamydophila felis Fe/C-56] gi|89331216|dbj|BAE80809.1| outer membrane protein [Chlamydophila felis Fe/C-56] Length = 191 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 53/162 (32%), Gaps = 8/162 (4%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 +R KR + + + N + + S F S Sbjct: 34 QDCQRPKRKKQNFAFVPLYTDEEMNQNFADSYDSKEEQLYQTSSQSVSFRNITFATDSYT 93 Query: 244 PLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 E + + ++ + I GHTD A N L RA + Q L+K Sbjct: 94 IKGEENLAILSSLVRQMQKSPKTTLYIEGHTDER---GAAAYNLALGARRANAVKQHLIK 150 Query: 302 SGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 G+S +R+ IS + + + ++ NRR + V R Sbjct: 151 QGISPERLFTIS-YGKEQPINSGHNELAWQQNRRTEFKVHAR 191 >gi|260555512|ref|ZP_05827733.1| outer membrane protein [Acinetobacter baumannii ATCC 19606] gi|260412054|gb|EEX05351.1| outer membrane protein [Acinetobacter baumannii ATCC 19606] Length = 255 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++ +L ++ L I GHTD+ A N +LS DRA + Sbjct: 154 FESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDATKNLKLSQDRALAV 210 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ + D +S G + + NRRI+ V Sbjct: 211 KNYLISKNIPADHLST-EGLGSSKPVADNTSAEGRKKNRRIEFTVL 255 >gi|21242231|ref|NP_641813.1| OmpA family protein [Xanthomonas axonopodis pv. citri str. 306] gi|21107654|gb|AAM36349.1| OmpA family protein [Xanthomonas axonopodis pv. citri str. 306] Length = 241 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 10/204 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q+ ++ + + ++ L + + + + A + + Sbjct: 30 QRDQYGEQTQQQNRTGRNALIGTAIGVAAGLLTGDSATERRQHAMVGAGIGALSGAAIGQ 89 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 L G+ + I +++ D FD S P+ L + Sbjct: 90 YQDRQERALRERTANTGIEVQRQGDNITLNLPDGIT---FDFGKSALKPQFYSALNGVAS 146 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + ++ + GHTD+ N RLS +RA + Q L GV +R+ + G Sbjct: 147 TLREYNQTMVEVVGHTDSV---GSDAVNQRLSEERAGAVAQYLTAQGVQRERMETM-GAG 202 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 + + NRR++I + Sbjct: 203 KRYPIADNSTDAGRAQNRRVEIRL 226 >gi|52421234|ref|YP_087146.1| putative outer membrane protein [Bacteroides fragilis YCH46] gi|52218755|dbj|BAD51347.1| putative outer membrane protein [Bacteroides fragilis YCH46] Length = 212 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 +N +F+ S + +L ++ V+ +I GHTD N LS + Sbjct: 101 QNDILFNFDSFELSSQAQTMLNQLCVVINEIPNTKVNIIGHTDNV---GDKNYNMVLSKN 157 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S + SGV D I++ G + + NRR++I + Sbjct: 158 RALSVGNYMRSSGVDGDNITE-DGKGLSSPIADNKTESGRAKNRRVEIYISTPN 210 >gi|311277523|ref|YP_003939754.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1] gi|308746718|gb|ADO46470.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1] Length = 220 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRQKMQGTGVSVTRSGDNIILNM---PNNVTFDSSSANLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV+ +RI + +G Sbjct: 137 VLKEYEKTAVNVVGYTDST---GSKDLNMRLSQQRADSVASSLITQGVAANRI-RTTGMG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 QANPIASNSTAEGKAQNRRVEITL 216 >gi|300870134|ref|YP_003785005.1| OmpA family outer membrane protein [Brachyspira pilosicoli 95/1000] gi|300687833|gb|ADK30504.1| outer membrane protein, OmpA family [Brachyspira pilosicoli 95/1000] Length = 401 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 13/146 (8%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + DN+ V+ +T G++I + +FD S + + I + Sbjct: 265 NELNRKKIEDNLNDDVVVDTVPEGLVIRL----GEILFDTDSYTLKEDAKDTVDNIINAI 320 Query: 260 AHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + + GHTD + A N LS RA + ++ + D++ GF Sbjct: 321 KQTYPDREIIVEGHTDNT---GEANYNQALSEKRAKTVADYILPK-LEHDKL-SYRGFGD 375 Query: 318 HRLKIASD--PMNSANRRIDILVEDR 341 ++D NRR+DI+++ R Sbjct: 376 KEPIASNDNPDGRQKNRRVDIIIKLR 401 >gi|291336864|gb|ADD96396.1| OmpA/MotB domain containing protein [uncultured organism MedDCM-OCT-S09-C206] Length = 211 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 72/214 (33%), Gaps = 8/214 (3%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 I + ++ +LEK + + Sbjct: 1 MIAETLEALNEARENAGAGASEQEVLFGGIEGELEKLAASMNEASPQNGEGPGGSSQEAY 60 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 ++ Q+ ++ + L V E + I++ + F ++ E Sbjct: 61 QKQQNASRTTEELTTALKQQIDQGLVEVEQRDDKVFITVG---SGGAFPSGTADLTEEAQ 117 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSED 307 +L +I I++ GHTD P +N RDNW L+ RA S Q + ++G + D Sbjct: 118 RILDRISLAAMSPKSTITVTGHTDDVPIKNAQFRDNWDLAAGRASSVVQAIQRTGLIDGD 177 Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 R+S +S + NRRI+I + Sbjct: 178 RLSAVS-KGETAPLADNATAAGRSENRRIEIEIT 210 >gi|260774012|ref|ZP_05882927.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14] gi|260610973|gb|EEX36177.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14] Length = 351 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 8/127 (6%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 + ++ +T + ++ + F S + + K+ + S +I+I GHT Sbjct: 217 EKIVEKTEIQQVNYELVSESFYSNFANDSYEL--ISANDIDKLIPKIKKSQGMITIIGHT 274 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330 D+ N++LS RA S L+K+G+ D++ + G + + + Sbjct: 275 DSI---GRPLYNYQLSYKRAQSVADYLIKNGIKSDQVV-VIGMGEDKPIADNLSYEGRAK 330 Query: 331 NRRIDIL 337 NRR++++ Sbjct: 331 NRRVEVI 337 >gi|108755187|emb|CAK32579.1| outer membrane protein [uncultured organism] Length = 178 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 + + + F+ L+K L I++ GH D N Sbjct: 63 VSEVGDRIFFEFDKYNLKAGARGTLEKQAAWLKKWPAVTITVEGHCDER---GTREYNLA 119 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 L RA S L+ GV+ RI IS + R +++ + NRR Sbjct: 120 LGERRANSVKDYLVALGVNPSRIKTIS-YGKERPVALGSNESAWAQNRR 167 >gi|89056405|ref|YP_511856.1| OmpA/MotB [Jannaschia sp. CCS1] gi|88865954|gb|ABD56831.1| OmpA/MotB [Jannaschia sp. CCS1] Length = 658 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 91/301 (30%), Gaps = 12/301 (3%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN----KIDLSIDE 104 + + T + + + + + + + + + D + Sbjct: 316 VTLIAAQGTSQELFDTVVGELDADLPAVFSLQAILPEPELEAAAAGPARFTATFDQAQGV 375 Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 + IG + Q ++ + ++ + R L + D Sbjct: 376 RLRGRLPGGAIGQSVQAFAAATFGAGTTDIATREVADLPQGWSIRVMAGLTALSQLEDGV 435 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 +I + ++++ ++ +DL ++ + + T + Sbjct: 436 LTIEPDTLRLSGRTGDSELISALTRQIAEDLGPGAIFDMNVAYDEALDPVASQPTPQECE 495 Query: 225 -LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR 282 I I FD S+ VL +I E+L V + I GHTDA Sbjct: 496 ARIRDIQDETKITFDPGSTEINRAAGEVLDEIAEILPDCMHVSMEIGGHTDAQ---GGET 552 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 N LS RA + L+ GV + G+ + ++ + NRRI+ + Sbjct: 553 MNLNLSQSRANAVLNGLLARGVLVSNL-AAQGYGESQPIADNETEDGREQNRRIEFRLLA 611 Query: 341 R 341 Sbjct: 612 D 612 >gi|16124456|ref|NP_419020.1| OmpA family protein [Caulobacter crescentus CB15] gi|221233140|ref|YP_002515576.1| outer membrane protein [Caulobacter crescentus NA1000] gi|13421324|gb|AAK22188.1| OmpA family protein [Caulobacter crescentus CB15] gi|220962312|gb|ACL93668.1| outer membrane protein [Caulobacter crescentus NA1000] Length = 226 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 11/147 (7%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + GV+ I++ + F S P VL + Sbjct: 84 NYMDRQQADFRRSLEGSGVMIRRNGDQIVLVMPSDVT---FAVDRSDVQPPFTRVLDDVA 140 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISG 314 L + + GH D+ N LS RA + L GV DR+ ++G Sbjct: 141 RTLNAYPQTTIDVVGHADS---SGPDDYNQTLSERRASAVAGYLTGPGGVLVDRVF-VAG 196 Query: 315 FAHHRLKIASDPM--NSANRRIDILVE 339 + + NRR++I++ Sbjct: 197 MGERAPIADNATADGRAQNRRVEIILR 223 >gi|332293158|ref|YP_004431767.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332171244|gb|AEE20499.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 236 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 72/207 (34%), Gaps = 17/207 (8%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + K ++ + + E + + ++ A++ Sbjct: 30 ANNKQKGAVIGATGGAILGAIIGNNAGKGGNGELGAVIGGVVGGGAGVLIGNKMDKQAQQ 89 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I L G + I G++ D+ + FD + + +L K+ + Sbjct: 90 IEQELPGATVERIDDGIVVT----------FDENSGVYFDTAKYNVNTASQTLLNKLSNI 139 Query: 259 LAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + + + GHTD+ +N LS +RA + ++ +G+S R + + + Sbjct: 140 MKEYNQTNVVVAGHTDSV---GSDTNNMTLSQNRANAVTNYMVGTGLSAGRFTTV-WYGE 195 Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342 + ++D + NRR+ + + + Sbjct: 196 TQPAASNDTAEGRAQNRRVQLAIVPNE 222 >gi|319955585|ref|YP_004166852.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319424245|gb|ADV51354.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 275 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 9/182 (4%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 D+ NK + LSK + K ++D S + V + Sbjct: 82 DITVMSNKTKEKMKATLSKVDPALLANAKTMEDSINLAISYNLKKSIADDEDDVNINIDK 141 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI 280 T ++I+I D+ +F+ S + +L+KI +V+ + + + GHTD+ + Sbjct: 142 TVVMINISDKL---LFNSGSYTVSNKANNILKKIADVINSEPSMEVMVEGHTDSRTIQTP 198 Query: 281 -ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 +DNW LS+ RA S ++L K V+ +++ SG + + +D S NRR I Sbjct: 199 MFQDNWDLSVKRATSVVRILQKKYNVAPEKLIA-SGRSSFLPLVENDSKENRSKNRRTRI 257 Query: 337 LV 338 ++ Sbjct: 258 VI 259 >gi|126734135|ref|ZP_01749882.1| hypothetical protein RCCS2_08249 [Roseobacter sp. CCS2] gi|126717001|gb|EBA13865.1| hypothetical protein RCCS2_08249 [Roseobacter sp. CCS2] Length = 536 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 69/221 (31%), Gaps = 23/221 (10%) Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 L+ E T ++ L + E+ E L E + L Sbjct: 326 LAEEADREAQVQIETLGAQLNTALARVVSEERQRRTLEEAERIRLEAEAERLAAEAEDLA 385 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 L ++ V + + +F S+ P + Sbjct: 386 RFKSTFFGELRQILEGQDRIRVEGDRFIFN---------SEVLFQPGSATLSPAGEAEIA 436 Query: 254 KIGEVLAH--------STEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVL-MKS 302 I ++L VI + GHTD P + DNW LS RA S + + Sbjct: 437 NIADILRSIAADIPEGIDWVIRVDGHTDNVPIGSNSRFADNWELSQARALSVVRFMSEDL 496 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 G+ R+ +GF + + + NRRI++ + +R Sbjct: 497 GIDPRRL-AANGFGEFQPLNPLNTAEARAQNRRIELKLTER 536 >gi|115352534|ref|YP_774373.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD] gi|115282522|gb|ABI88039.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 232 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 ++ F + P +L + L + + S+ G+TD++ A+ N LS + Sbjct: 120 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQLTGSVIGYTDST---GSAQLNQTLSQN 176 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + GV+ R+S G + + NRR++I + Q Sbjct: 177 RAQSVVNALAQRGVAGGRLSA-QGMGPSNPIADNATEAGRAQNRRVEIYLRAPQ 229 >gi|259417844|ref|ZP_05741763.1| OmpA/MotB [Silicibacter sp. TrichCH4B] gi|259346750|gb|EEW58564.1| OmpA/MotB [Silicibacter sp. TrichCH4B] Length = 221 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 +++ + L + T +++S+ + F SS L+K+ Sbjct: 79 RELDKQEAELRQSLDNDSISIVNTGDRLIVSLPNDLT---FATDSSAISSVVRSDLRKVA 135 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L V+ + GHTD+ A N+ LS RA + + GVS +R+ +I G Sbjct: 136 GSLQRYPGSVVQVIGHTDSD---GAASYNYSLSERRANAVADEIAAGGVSYNRM-RIIGR 191 Query: 316 AHHRLKIASDPMN--SANRRIDILV 338 + ++ + NRR++I++ Sbjct: 192 GEDQPVASNLTAEGKARNRRVEIVI 216 >gi|91783726|ref|YP_558932.1| hypothetical protein Bxe_A2088 [Burkholderia xenovorans LB400] gi|91687680|gb|ABE30880.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans LB400] Length = 443 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 7/136 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V + ++ R MF ++ ++ KI +A Sbjct: 310 LKNEIAAGTVSVDEDAHHSSVTF---RGDSMFPPGAAAVKTSMTPLITKIAGEIAKVPGK 366 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ G+TD P ++ N LS +RA Q+L +GV R+ + G + Sbjct: 367 VTVLGYTDNVPIKSRQFASNAALSEERATQIMQMLQTAGVPAVRLEAV-GRGDADPIGDN 425 Query: 325 DP--MNSANRRIDILV 338 + NRR++I V Sbjct: 426 TTVQGRAQNRRVEITV 441 >gi|146300076|ref|YP_001194667.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146154494|gb|ABQ05348.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 727 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 76/273 (27%), Gaps = 12/273 (4%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 + T G+ D+Q+ + + + T + Sbjct: 454 KQFKDTDGDGVIDKQDACRKVAGPVENNGCPWPDTDKDGVFDKDDACPDTAGPKENKGCP 513 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + + S + + + + ++ + K L Sbjct: 514 WKDSDGDSLLDNVDACPAVAGPVENKGCPWPDTDGDGILDKDDACPNEAGLAENKGCPSL 573 Query: 193 QDLAK-KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP----E 247 + + L + + + F + E Sbjct: 574 DADKDGVLDKDDDCPLVYGPADNKGCPKVTKETLAQLKMEAKSIFFTTGKATLSDAKMGE 633 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 T L I E+L + +I GHTD A+ N +LS RA +L++ GV+ Sbjct: 634 TSGRLDAIKEILKNYPNAKFAINGHTDNV---GNAKVNQKLSEQRAKVVMDLLIEKGVNP 690 Query: 307 DRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 ++ G+ + ++ + NRR +I+ Sbjct: 691 ANLTS-KGYGASKPVKSNKTASGRAENRRTEIV 722 >gi|76809643|ref|YP_335000.1| OmpA family domain-containing protein [Burkholderia pseudomallei 1710b] gi|226198194|ref|ZP_03793765.1| ompA family protein [Burkholderia pseudomallei Pakistan 9] gi|254190435|ref|ZP_04896943.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] gi|254259878|ref|ZP_04950932.1| ompA family protein [Burkholderia pseudomallei 1710a] gi|254300689|ref|ZP_04968134.1| ompA family protein [Burkholderia pseudomallei 406e] gi|76579096|gb|ABA48571.1| OmpA family domain protein [Burkholderia pseudomallei 1710b] gi|157810473|gb|EDO87643.1| ompA family protein [Burkholderia pseudomallei 406e] gi|157938111|gb|EDO93781.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] gi|225929714|gb|EEH25730.1| ompA family protein [Burkholderia pseudomallei Pakistan 9] gi|254218567|gb|EET07951.1| ompA family protein [Burkholderia pseudomallei 1710a] Length = 310 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 84/277 (30%), Gaps = 16/277 (5%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + G+ + P + S +T + + Sbjct: 34 PATVTPIDAGGVPVKSVPLAAPVTAAPVAATAGAGATVSSPPPANATPGQVVAGGKVADE 93 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + Q ++ + +T S N ++ K + Sbjct: 94 ATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQ 153 Query: 192 LQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQ--------RNTPMFDKSSS 242 + + + +A ++ + T + G+ +S +Q T F+ S+ Sbjct: 154 IDVKGEVHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSA 213 Query: 243 IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 P+ +L ++ LA + I GHTD N LS RA + L+ Sbjct: 214 TLTPQGRAILDQMAGALAKMSSRTVEIIGHTDN---SGNRTSNIALSQARADAVKGYLVT 270 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 G++ +++ +G + +D + NRRI+ Sbjct: 271 KGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRIEF 306 >gi|325286110|ref|YP_004261900.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324321564|gb|ADY29029.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 372 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F+ + + L + + + +L ++ + I I GHTDA N LS R Sbjct: 265 KNVLFEFNKADLLTASEEEINVLTTILRNNNKLSIEIYGHTDAV---GSKERNLELSNQR 321 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 A + L+ SG+ E+R+ I G+ + + NRR++ + + Sbjct: 322 AKAVASYLIDSGIDENRVKWI-GYGSSKPVADNTTEEGRTQNRRVEFKMLE 371 >gi|66770081|ref|YP_244843.1| hypothetical protein XC_3783 [Xanthomonas campestris pv. campestris str. 8004] gi|77747955|ref|NP_639058.2| hypothetical protein XCC3712 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|188993294|ref|YP_001905304.1| hypothetical protein xccb100_3899 [Xanthomonas campestris pv. campestris str. B100] gi|66575413|gb|AAY50823.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167735054|emb|CAP53266.1| OmpA family protein [Xanthomonas campestris pv. campestris] Length = 215 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS +K+++ K + L+ +A R ++ I R + + Sbjct: 43 QLSSRLDDEVKQRQAEAQRRKTLEQALAAPLAAG----------RVTLVNGRIGIRGSVL 92 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPF---RNIARDNWRLSL 289 F +S PE VL+ + L+ E++ I G TD P DNW LS Sbjct: 93 FALNSDQLQPEGREVLKSLAAPLSEYLVSREEILMISGFTDDRPVLDSNRRYADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ GV + + F + ++ + + NRR++I Sbjct: 153 QRALTVTRALIAEGVPASSVFAAA-FGSQQPVDSNADETRRAKNRRVEI 200 >gi|39995916|ref|NP_951867.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA] gi|39982680|gb|AAR34140.1| OmpA domain protein [Geobacter sulfurreducens PCA] gi|298504930|gb|ADI83653.1| OmpA domain porin [Geobacter sulfurreducens KN400] Length = 466 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 13/151 (8%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + K+ + + ++ + + + I++ Q FD P+ + Sbjct: 320 TEAGKQRNRRIEAIIDCALEDPKVIAALPDRLCIALKVQ-----FDTDKWDIKPQYRGEI 374 Query: 253 QKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 K+G+ + + T I GHTD A N +LSL RA + L++ G+ R+S Sbjct: 375 AKVGDFMTRNPTTTAIIEGHTDRV---GTADHNMKLSLRRAEAVVNYLVEHFGIERSRLS 431 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVE 339 G+ R + NRRI+ +++ Sbjct: 432 A-KGYGFSRPIAYNSTAEGRALNRRINAIID 461 >gi|295681046|ref|YP_003609620.1| type IV / VI secretion system protein, DotU family [Burkholderia sp. CCGE1002] gi|295440941|gb|ADG20109.1| type IV / VI secretion system protein, DotU family [Burkholderia sp. CCGE1002] Length = 444 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 51/137 (37%), Gaps = 7/137 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + VL E + + R +F S PE VL ++ + +A Sbjct: 311 LKDEIARGQVLVEENGSSSRVVF---RGDYVFLPGQSRIRPELDPVLSRVAQEVARVGGK 367 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GHTD P DN LS RA V+ GV RI I G + + Sbjct: 368 VTVTGHTDNQPIHTAEFPDNQVLSEKRAAFVADVMKAHGVPAIRIVAI-GKGDIQPVADN 426 Query: 325 DPMNS--ANRRIDILVE 339 NRR+++ V Sbjct: 427 TTAEGRSRNRRVEVFVT 443 >gi|320538203|ref|ZP_08038098.1| OmpA family protein [Treponema phagedenis F0421] gi|1399286|gb|AAB03251.1| MotB [Treponema phagedenis] gi|320145020|gb|EFW36741.1| OmpA family protein [Treponema phagedenis F0421] Length = 238 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 11/163 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 AM ++ + L + +S + + + G++IS+ F + SS Sbjct: 76 AMPSLEKGKKLGTALKKAVSLFAPEIKTNKIAVTSDERGLVISLAAD---AFFHRDSSDL 132 Query: 245 L-PETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVL 299 ET L I L+ + GHT S D+W+LS RA + L Sbjct: 133 DIEETRESLLHIARFLSDKELEGRRFRVEGHTSTSEVAASKEIDDWQLSSQRAINVLHYL 192 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 G E R ++G+A R K ++D NRR+DI++ D Sbjct: 193 TDFGAEESRF-SVAGYADTRPKASNDTAEGRAYNRRVDIIILD 234 >gi|45656490|ref|YP_000576.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599725|gb|AAS69213.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 475 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 12/141 (8%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 A V T GI IS+ N+ +FD +SS E + L++I VL Sbjct: 340 EEEDNQAAPEGSPVEIRRTEEGIAISL----NSVLFDHNSSELKQEAKLELKRIASVLKK 395 Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHR 319 + I I GHTD N +LS +RA S + L + G+ E R+ G+ + Sbjct: 396 YADREIRISGHTDN---SGGEEYNRKLSRERALSVLKELRDEQGLEEKRM-SYEGYGKSK 451 Query: 320 LKIASDP--MNSANRRIDILV 338 + NRR+DI + Sbjct: 452 PIADNSTIQGRQKNRRVDITI 472 >gi|16802728|ref|NP_464213.1| hypothetical protein lmo0686 [Listeria monocytogenes EGD-e] gi|224498768|ref|ZP_03667117.1| hypothetical protein LmonF1_03321 [Listeria monocytogenes Finland 1988] gi|224502009|ref|ZP_03670316.1| hypothetical protein LmonFR_05752 [Listeria monocytogenes FSL R2-561] gi|254830323|ref|ZP_05234978.1| hypothetical protein Lmon1_03142 [Listeria monocytogenes 10403S] gi|254900078|ref|ZP_05260002.1| hypothetical protein LmonJ_09695 [Listeria monocytogenes J0161] gi|255026595|ref|ZP_05298581.1| hypothetical protein LmonocytFSL_10100 [Listeria monocytogenes FSL J2-003] gi|284801016|ref|YP_003412881.1| hypothetical protein LM5578_0765 [Listeria monocytogenes 08-5578] gi|284994158|ref|YP_003415926.1| hypothetical protein LM5923_0720 [Listeria monocytogenes 08-5923] gi|5305456|gb|AAD41660.1| motility protein [Listeria monocytogenes] gi|16410075|emb|CAC98764.1| motB [Listeria monocytogenes EGD-e] gi|284056578|gb|ADB67519.1| hypothetical protein LM5578_0765 [Listeria monocytogenes 08-5578] gi|284059625|gb|ADB70564.1| hypothetical protein LM5923_0720 [Listeria monocytogenes 08-5923] Length = 275 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 87/225 (38%), Gaps = 14/225 (6%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +Q I + + D + K+ + + + + Sbjct: 47 EQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAA 106 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 +L + +++++ K+I S ++ +N+ + + + G+LI+I D +F S Sbjct: 107 ALLKKQNEEKIEAFKKQIDSYIAA---ENLGTKMTTKYSDEGLLITIRDD---ILFQSGS 160 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV 298 + + ++IGE+ A + + GHTD P NW LS+ RA + + Sbjct: 161 AELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEA 220 Query: 299 LMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 +++ V+ S G+ R +D NRR++I+V Sbjct: 221 IIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 264 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 70/209 (33%), Gaps = 1/209 (0%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ + +W I Y+D +T+L+A F+V++ ++ D + + F + Sbjct: 3 KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 ++ ++ P+ + N + +++E K + + + + +N + + Sbjct: 63 GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKK 122 Query: 139 QSEHCKNSLT-RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q + + K + + + LS K K L K Sbjct: 123 QIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEIGELFAQGK 182 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILI 226 + DN+ ++ + + Sbjct: 183 GTMEGIVSGHTDNVPISTSIYSSNWELSV 211 >gi|153872253|ref|ZP_02001198.1| outer membrane protein OprF [Beggiatoa sp. PS] gi|152071282|gb|EDN68803.1| outer membrane protein OprF [Beggiatoa sp. PS] Length = 175 Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD + +L++ E L ++ + I GHTD+ A N LS RA + Sbjct: 71 FDTDCPAIKANSYTLLREYAEALKTGLASVKLEIGGHTDS---SGPAYYNLTLSKKRAQA 127 Query: 295 AYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L+ V ++R+ + G+ + ++ + NRR++ V Sbjct: 128 VKDFLVFAYAVEDNRLI-VKGYGETQPIASNRTRDGQAKNRRVEFKVIR 175 >gi|91226490|ref|ZP_01261239.1| putative lipoprotein [Vibrio alginolyticus 12G01] gi|91189122|gb|EAS75403.1| putative lipoprotein [Vibrio alginolyticus 12G01] Length = 219 Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 60/208 (28%), Gaps = 9/208 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +Q+ +S L + + I A Sbjct: 15 QATQRQNATTGEYETNSTTQGALIGAIAGAAIGLATGDDAKERRQHALIGAAAGGATGAG 74 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + L + GV + L ++ N F SS L+ Sbjct: 75 VGYYFDQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRG 132 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + + G+TD++ N LS RA S Q L+ V+ R Sbjct: 133 VARILVEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQNVAPGRAIA-R 188 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339 G+ ++ NRR++I + Sbjct: 189 GYGERNPICSNQTSEGRACNRRVEIQIL 216 >gi|224370810|ref|YP_002604974.1| OmpF [Desulfobacterium autotrophicum HRM2] gi|223693527|gb|ACN16810.1| OmpF [Desulfobacterium autotrophicum HRM2] Length = 213 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 8/104 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD SS P L ++ +VL + I + GHTD+ + + N LS RA + Sbjct: 112 FFDFDSSTLKPGAYSELDRVAKVLRDFPQTRIRVEGHTDS---KGTDQYNMLLSQRRAQA 168 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 L++ GV R+ I GF + ++D NRR++I++ Sbjct: 169 VTDALVQRGVDPMRMESI-GFGESQPVSSND---GDNRRVNIVI 208 >gi|110833095|ref|YP_691954.1| hypothetical protein ABO_0234 [Alcanivorax borkumensis SK2] gi|110646206|emb|CAL15682.1| Flagellar motor protein [Alcanivorax borkumensis SK2] Length = 213 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 68/179 (37%), Gaps = 24/179 (13%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 L +EK + ++R L + ++ L+ + Sbjct: 43 ELSQSLEQEKAKRLAEEQRRMALEEALADPLASGRVTFNNGRIGI--------------S 88 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA----HSTEVISIRGHTDASPFR---NIARDNW 285 + +F +S PE +L + + L +++ + G TDA P DNW Sbjct: 89 GSVLFQLNSDRLQPEGKALLSDLVKPLQVFLSQHDDMLMVSGFTDALPINRGNGRYADNW 148 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 LS RA + + L++ G+ D++ + F ++ +D + NRR+++ RQ Sbjct: 149 GLSAQRALTVTRTLIEQGMPADQVFAAA-FGDNQPVAPNDDADSRARNRRVELTTVPRQ 206 >gi|152985769|ref|YP_001345545.1| hypothetical protein PSPA7_0149 [Pseudomonas aeruginosa PA7] gi|150960927|gb|ABR82952.1| hypothetical protein PSPA7_0149 [Pseudomonas aeruginosa PA7] Length = 449 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 7/136 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L D + V E +++I +F +S+ E +L +I + L Sbjct: 312 LAEDIKAQRVAVEDAVDRSVVTIRGDE---LFASASASVRDEFQPLLLRIADALRKVKGQ 368 Query: 266 ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + + GH+D P NW+LS RA +L + R + G + + Sbjct: 369 VLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGEAGRFTA-EGRSDTEPVATN 427 Query: 325 DPM--NSANRRIDILV 338 + NRR++I V Sbjct: 428 ASAEGRARNRRVEITV 443 >gi|332828855|gb|EGK01538.1| hypothetical protein HMPREF9455_02070 [Dysgonomonas gadei ATCC BAA-286] Length = 290 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 9/160 (5%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + K + L + + L+ ++ + ++ + + + + IS+ D ++ S Sbjct: 115 EAKNKSDSLNLVMVNNLTRSLSRSEMQDLDIKVLKGVVYISLADNM---LYRSGSYEISE 171 Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-G 303 + +L KI +++ + + G+TD P R+NW LS RA S Q L + G Sbjct: 172 KAGEILSKIAKIILDYKDYDVLVEGNTDTDPISRPNIRNNWDLSTLRASSVVQALQNNYG 231 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 V R++ G + ++ + NRR I++ + Sbjct: 232 VDPKRMTAG-GRGEYNPVASNSTIEGKALNRRTQIIITPK 270 >gi|167838594|ref|ZP_02465453.1| hypothetical protein Bpse38_18947 [Burkholderia thailandensis MSMB43] Length = 391 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 8/166 (4%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADN-IVKGVLFETTRTGILISIIDQRNTPMF 237 S + + R+ A L L+AD V + ++ R MF Sbjct: 230 SADVQQRIAAIARMTPPAAPAELRLKALLADEIAAGTVSVDEDARHSSVTF---RGDAMF 286 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAY 296 ++ +++KI +A + + G+TD P ++ N LS +RA Sbjct: 287 PPGAAGVNATMGPLVKKIAAEIAKVPGKVIVLGYTDNQPIKSRQFASNEALSEERATQVM 346 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 Q+L +GV R+ + G + + NRR++I V Sbjct: 347 QMLQSAGVPASRLEAL-GKGDANPIGDNRTPQGRALNRRVEITVAR 391 >gi|49188511|ref|YP_025325.1| OmpA [Pseudomonas alcaligenes] gi|5123490|gb|AAD40344.1|U88088_22 OmpA [Pseudomonas alcaligenes] Length = 220 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 10/147 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L GV E I+I + F + P L ++ Sbjct: 74 YADKQEAELREQMKGSGVQVERQGDEIVIVM---PGAITFATGKAEIQPNFANTLNQLAG 130 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + + + GHTD+ N LS RA S Q L +GV DRI ++ G Sbjct: 131 SFRNYPDSRLIVTGHTDSV---GSYEANELLSQRRAQSVAQFLRGNGVQTDRI-EVIGAG 186 Query: 317 HHRLKIASDPM--NSANRRIDILVEDR 341 ++ ++ + NRR++I + R Sbjct: 187 PNQPVASNATAEGRAQNRRVEIKLAPR 213 >gi|114320554|ref|YP_742237.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226948|gb|ABI56747.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 266 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 70/209 (33%), Gaps = 9/209 (4%) Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 +S +E + + D S + + P+ + + + Sbjct: 32 SSLDAEKYRLAAQSIRAAFGPQLTEGDPSPSPSPIDFDGGSPVDPSLLEDL-LDAVPDPI 90 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + L + + E +LI ++ F S+ + +L + Sbjct: 91 DQITAELQEQLEGELGEGLLEVERLDENVLIRFPEKAA---FPSGSADVNASFLPILHTV 147 Query: 256 GEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKIS 313 VLA I + GHTD P R NW LS RA +L+++ + R Sbjct: 148 AGVLAGQGGTIRVSGHTDDVPIDTERFRSNWELSTARATEVVHLLLEAAPIEPGRFIA-Q 206 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVED 340 G A R + + NRR+D+L+ Sbjct: 207 GHADTRPLRPNTSPENRARNRRVDVLITG 235 >gi|167908679|ref|ZP_02495884.1| hypothetical protein BpseN_41039 [Burkholderia pseudomallei NCTC 13177] Length = 395 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 285 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 344 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 345 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 395 >gi|289679931|ref|ZP_06500821.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5] Length = 190 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 12/181 (6%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGIL 225 + N L K+ +++ +L K++S ++ + + T G++ Sbjct: 12 AREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTETDRGLV 71 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284 +++ D +FD + + K+ + L + V+ I G+TD++ +DN Sbjct: 72 MTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST---GDRQDN 124 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 +LS DRA + VLM GV E RI + G+ A+ + + NRR++I+ D + Sbjct: 125 LKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQEFPVNANTFERGRAQNRRVEIVFSDEK 183 Query: 343 G 343 G Sbjct: 184 G 184 >gi|15836965|ref|NP_297653.1| hypothetical protein XF0363 [Xylella fastidiosa 9a5c] gi|9105193|gb|AAF83173.1|AE003888_6 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 242 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 L G+ + I +++ D FD S+ P+ L+ + Sbjct: 91 NYQDRQERALRERTANTGIDVKRDGDNITLNLPDGIT---FDFGKSMLKPQFYGALKNVA 147 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L + +I + G+TD+ N RLS DRA + L GV +R+ +ISG Sbjct: 148 STLREYNQTMIEVVGYTDSI---GSDVVNQRLSEDRAGAVASYLAGQGVQRERM-EISGM 203 Query: 316 AHHRLKIASDPMNSA--NRRIDILV 338 + NRR++I + Sbjct: 204 GKRYPIADNSTEAGRSKNRRVEIHL 228 >gi|47095252|ref|ZP_00232863.1| chemotaxis protein MotB [Listeria monocytogenes str. 1/2a F6854] gi|258611605|ref|ZP_05234030.2| chemotaxis protein MotB [Listeria monocytogenes FSL N3-165] gi|258612097|ref|ZP_05267393.2| chemotaxis protein MotB [Listeria monocytogenes F6900] gi|293596468|ref|ZP_05261381.2| chemotaxis protein MotB [Listeria monocytogenes J2818] gi|47016323|gb|EAL07245.1| chemotaxis protein MotB [Listeria monocytogenes str. 1/2a F6854] gi|258601756|gb|EEW15081.1| chemotaxis protein MotB [Listeria monocytogenes FSL N3-165] gi|258608279|gb|EEW20887.1| chemotaxis protein MotB [Listeria monocytogenes F6900] gi|293589306|gb|EFF97640.1| chemotaxis protein MotB [Listeria monocytogenes J2818] Length = 289 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 87/225 (38%), Gaps = 14/225 (6%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +Q I + + D + K+ + + + + Sbjct: 61 EQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAA 120 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 +L + +++++ K+I S ++ +N+ + + + G+LI+I D +F S Sbjct: 121 ALLKKQNEEKIEAFKKQIDSYIAA---ENLGTKMTTKYSDEGLLITIRDD---ILFQSGS 174 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV 298 + + ++IGE+ A + + GHTD P NW LS+ RA + + Sbjct: 175 AELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEA 234 Query: 299 LMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 +++ V+ S G+ R +D NRR++I+V Sbjct: 235 IIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 278 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 76/224 (33%), Gaps = 1/224 (0%) Query: 4 HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63 + +E + + + K+ + +W I Y+D +T+L+A F+V++ ++ D + Sbjct: 2 EKGRKREKWRKLSVAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFE 61 Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 + F + ++ ++ P+ + N + +++E K + + + Sbjct: 62 QMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAA 121 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLT-RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + +N + +Q + + K + + + LS K Sbjct: 122 LLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGK 181 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 K L K + DN+ ++ + + Sbjct: 182 REIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSV 225 >gi|311104068|ref|YP_003976921.1| inner membrane lipoprotein YiaD [Achromobacter xylosoxidans A8] gi|310758757|gb|ADP14206.1| inner membrane lipoprotein YiaD [Achromobacter xylosoxidans A8] Length = 215 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 10/126 (7%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + E + ++I + FD + P + VL + L E + GHTD+ Sbjct: 92 VVEMPDGSLKVNI---PSGVSFDTDKTQLKPALLPVLDSVARSLNQHPELRAKVVGHTDS 148 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 + N LS++RA S L K GV+ R+ + G + + NR Sbjct: 149 T---GALAHNQTLSVNRAKSVTDYLGKQGVAAGRL-TVEGRGPNDPIGDNATAEGRALNR 204 Query: 333 RIDILV 338 R++I + Sbjct: 205 RVEIYL 210 >gi|170735277|ref|YP_001774391.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169821315|gb|ACA95896.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3] Length = 228 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + +I P + L K+ + I G+TD N RLS RA + Sbjct: 125 FDFNQAILTPAAMQQLDKVIANGKGMTFGTVGISGYTDGL---GTDTYNRRLSEQRAQAV 181 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 L G++ R +I G+ R ++ + NRR++I++ Sbjct: 182 ASYLQAHGLNARRF-EIHGYGAERPVALNNTALGRAQNRRVEIVL 225 >gi|326336372|ref|ZP_08202543.1| lipoprotein PG3 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691546|gb|EGD33514.1| lipoprotein PG3 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 231 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 59/142 (41%), Gaps = 8/142 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + G + GI+++ D+++ F+ + + E +L K+ VL Sbjct: 83 QAKKIEEEIPGAEVKRVDDGIVVTF-DEKSGVTFEFNKATLTSEAQTILNKMVSVLKEYP 141 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + + GHTD++ A N LS RA + +G++ R + F + Sbjct: 142 DTNVIVAGHTDST---GKAAYNMTLSEKRAKAVTNFFTTNGLNASRFTT-KWFGATQPAY 197 Query: 323 ASDPM--NSANRRIDILVEDRQ 342 + + NRR+++++ + Sbjct: 198 DNSTAEGRAKNRRVNVVIVPNE 219 >gi|312963881|ref|ZP_07778352.1| hypothetical protein PFWH6_5800 [Pseudomonas fluorescens WH6] gi|311281916|gb|EFQ60526.1| hypothetical protein PFWH6_5800 [Pseudomonas fluorescens WH6] Length = 429 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 64/176 (36%), Gaps = 14/176 (7%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 N +P + ++ +A + LA ++ + V E +++ Sbjct: 261 NIHALGEIPVQAIDRPVAQPQVIERPRLAGFLAEEIK-------AGRVAVEDKVDRSVVT 313 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWR 286 I +F +S+ + + ++ +I + + + + GH+D P NW Sbjct: 314 IRGDE---LFASASASIVDDYQPLMLRIADAIRKVKGQVRVTGHSDNRPIATLRFPSNWA 370 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 LS RA S ++L DR S G + + + NRR++I V Sbjct: 371 LSEARAKSVLEILAAKTGQADRFSA-EGRSDTEPLATNSTAEGRARNRRVEITVLA 425 >gi|86157810|ref|YP_464595.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85774321|gb|ABC81158.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter dehalogenans 2CP-C] Length = 259 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 8/177 (4%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGILI 226 + + P + + + ++ L K+I + V + V + + Sbjct: 71 DGPPSEGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTV 130 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR--DN 284 + FD + P+ + +L I L + + GHTD +P R N Sbjct: 131 RLAATE---FFDPGQAALRPQALAMLDAIAAELVPLARPLRVEGHTDETPVGGGGRWISN 187 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339 W LS RA + L ++ + G + NRR+++++E Sbjct: 188 WELSAARAATVVGYLEQAHAARPAGLSAVGLGSAHPLSTDATPEAHERNRRVELVLE 244 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 48/144 (33%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W + YADFMT+L AFF+VM+ ++ D+ + T G + P Sbjct: 16 WLVSYADFMTLLFAFFVVMYAVSRVDNKRIVQATESIRWAMHFSGTGGTGALPLFDGPPS 75 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 + ++ + +++ + S E + ++ + Sbjct: 76 EGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTVRLAAT 135 Query: 153 KGKDLCKSTDLEKSINKEENYFLP 176 + D ++ +++ + Sbjct: 136 EFFDPGQAALRPQALAMLDAIAAE 159 >gi|46906937|ref|YP_013326.1| chemotaxis protein MotB [Listeria monocytogenes serotype 4b str. F2365] gi|226223317|ref|YP_002757424.1| motility protein (flagellar motor rotation) MotB [Listeria monocytogenes Clip81459] gi|254993370|ref|ZP_05275560.1| motility protein (flagellar motor rotation) MotB [Listeria monocytogenes FSL J2-064] gi|255522318|ref|ZP_05389555.1| motility protein (flagellar motor rotation) MotB [Listeria monocytogenes FSL J1-175] gi|46880203|gb|AAT03503.1| chemotaxis protein MotB [Listeria monocytogenes serotype 4b str. F2365] gi|225875779|emb|CAS04482.1| Putative motility protein (flagellar motor rotation) MotB [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|328467255|gb|EGF38335.1| chemotaxis protein MotB [Listeria monocytogenes 1816] gi|328475649|gb|EGF46398.1| chemotaxis protein MotB [Listeria monocytogenes 220] Length = 275 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 92/232 (39%), Gaps = 11/232 (4%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 S+ K+++++ N + + + ++ + +K++ Sbjct: 37 ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEAT 96 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 +K+ A+ +K+ + + S + A+++ + + + G+LI+I D Sbjct: 97 EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDD--- 153 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291 +F S+ + ++IGE+ A + + GHTD P NW LS+ R Sbjct: 154 ILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 213 Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 A + + +++ V+ S G+ R +D NRR++I+V Sbjct: 214 AVNFMEAIIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 264 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 63/173 (36%), Gaps = 3/173 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ + +W I Y+D +T+L+A F+V++ ++ D + + F + Sbjct: 3 KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 ++ ++ P+ + N + +++E K + + + +N + + Sbjct: 63 GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAALLKKQNEEKIEAFKK 122 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 Q + + + K K +D I ++ S E + + Sbjct: 123 QIDSY---IAAEHLGAKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAK 172 >gi|313204239|ref|YP_004042896.1| ompa/motb domain protein [Paludibacter propionicigenes WB4] gi|312443555|gb|ADQ79911.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4] Length = 410 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 24/184 (13%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 D + + L K +LQ K I ++ VL + Sbjct: 247 EDENAANKAKIQKLEADLQAANAERAADKAKLQADLKDIPQAKVSADSNQDALTVLLDVN 306 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFR 278 F+ SS + +L + VL + I GHTD Sbjct: 307 ----------------FEFGSSELSSRSRAILDDVALVLKVNKAWSKLLISGHTDNI--- 347 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 + N +LS +RA + L+ G+S + ++GF + K ++ NRR ++ Sbjct: 348 GGDKANKKLSEERAAGVKKYLISKGISAS-VIDVAGFGKEKPKTTNETKEGRYKNRRAEL 406 Query: 337 LVED 340 ++E Sbjct: 407 VIEK 410 >gi|260909380|ref|ZP_05916088.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295] gi|260636472|gb|EEX54454.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295] Length = 280 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 63/160 (39%), Gaps = 9/160 (5%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + K + L +++ L+ ++ +K V + + IS+ D ++ S Sbjct: 109 EVKSKSDSLNMVLTNNLTRSLSREELKEVDVRVLKGVVYISLADNM---LYKSGSYEIND 165 Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM-KSG 303 L KI +++ + + G+TD P R+NW LS RA S Q L + G Sbjct: 166 RAAETLSKIAKIIMDYQDYDVLVEGNTDNVPINRENIRNNWDLSCLRASSVVQYLQTRYG 225 Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 V+ R++ G + NRR I++ + Sbjct: 226 VNPKRLTAG-GRGEFNPVATNGTEVGKQRNRRTQIIITPK 264 >gi|255023068|ref|ZP_05295054.1| motility protein (flagellar motor rotation) MotB [Listeria monocytogenes FSL J1-208] Length = 275 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 92/232 (39%), Gaps = 11/232 (4%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 S+ K+++++ N + + + ++ + +K++ Sbjct: 37 ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEAT 96 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 +K+ A+ +K+ + + S + A+++ + + + G+LI+I D Sbjct: 97 EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDD--- 153 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291 +F S+ + ++IGE+ A + + GHTD P NW LS+ R Sbjct: 154 ILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 213 Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 A + + +++ V+ S G+ R +D NRR++I+V Sbjct: 214 AVNFMEAIIQENNEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 264 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 63/173 (36%), Gaps = 3/173 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ + +W I Y+D +T+L+A F+V++ ++ D + + F + Sbjct: 3 KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 ++ ++ P+ + N + +++E K + + + +N + + Sbjct: 63 GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAALLKKQNEEKIEAFKK 122 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 Q + + + K K +D I ++ S E + + Sbjct: 123 QIDSY---IAAEHLGAKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAK 172 >gi|258611826|ref|ZP_05242458.2| chemotaxis protein MotB [Listeria monocytogenes FSL R2-503] gi|293596186|ref|ZP_05229035.2| chemotaxis protein MotB [Listeria monocytogenes FSL J1-194] gi|293596895|ref|ZP_05265393.2| chemotaxis protein MotB [Listeria monocytogenes HPB2262] gi|300764498|ref|ZP_07074491.1| chemotaxis protein MotB [Listeria monocytogenes FSL N1-017] gi|258606459|gb|EEW19067.1| chemotaxis protein MotB [Listeria monocytogenes FSL R2-503] gi|293583586|gb|EFF95618.1| chemotaxis protein MotB [Listeria monocytogenes HPB2262] gi|293593262|gb|EFG01023.1| chemotaxis protein MotB [Listeria monocytogenes FSL J1-194] gi|300514852|gb|EFK41906.1| chemotaxis protein MotB [Listeria monocytogenes FSL N1-017] gi|332311111|gb|EGJ24206.1| Chemotaxis protein MotB [Listeria monocytogenes str. Scott A] Length = 289 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 92/232 (39%), Gaps = 11/232 (4%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 S+ K+++++ N + + + ++ + +K++ Sbjct: 51 ASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEAT 110 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 +K+ A+ +K+ + + S + A+++ + + + G+LI+I D Sbjct: 111 EQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDD--- 167 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDR 291 +F S+ + ++IGE+ A + + GHTD P NW LS+ R Sbjct: 168 ILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVAR 227 Query: 292 AYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 A + + +++ V+ S G+ R +D NRR++I+V Sbjct: 228 AVNFMEAIIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 278 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 69/188 (36%), Gaps = 3/188 (1%) Query: 4 HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63 + +E + + + K+ + +W I Y+D +T+L+A F+V++ ++ D + Sbjct: 2 EKGRKREKWRKLSVAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFE 61 Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 + F + ++ ++ P+ + N + +++E K + + Sbjct: 62 QMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAA 121 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + +N + +Q + + + K K +D I ++ S E Sbjct: 122 LLKKQNEEKIEAFKKQIDSY---IAAEHLGAKMTTKYSDEGLLITIRDDILFQSGSAELT 178 Query: 184 LAMKRKKR 191 + + Sbjct: 179 AGKREIAK 186 >gi|330946399|gb|EGH47480.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B] Length = 213 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 12/181 (6%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFETTRTGIL 225 + N L K+ +++ +L K++S ++ + + T G++ Sbjct: 35 AREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTETDRGLV 94 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284 +++ D +FD + + K+ + L + V+ I G+TD++ +DN Sbjct: 95 MTLGD----VLFDAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDST---GDRQDN 147 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 +LS DRA + VLM GV E RI + G+ A+ + NRR++I+ D + Sbjct: 148 LKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQEFPVNANTSERGRAQNRRVEIVFSDEK 206 Query: 343 G 343 G Sbjct: 207 G 207 >gi|307721192|ref|YP_003892332.1| OmpA/MotB domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306979285|gb|ADN09320.1| OmpA/MotB domain protein [Sulfurimonas autotrophica DSM 16294] Length = 259 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 79/201 (39%), Gaps = 11/201 (5%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + SE L + + + + E L I + + ++ + Sbjct: 38 SSMDAKKISEAIGSLSGAMSVLEGGTQTEISKKRMLEATPIDIQDETSEIVNRVQQAAGD 97 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP-LPETIVVLQKIGEVLAH 261 + ++ + + + G +I + T +F+ S+ + ++ L++I ++ Sbjct: 98 ANEMMEKTQSPAITIKEAQDGFVIKL---PATLLFNPGSATIENQDALLFLKRITLIIQE 154 Query: 262 STEVI--SIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + ++GHTD + + +DNW LS RA + L+ GV R+S +GFA Sbjct: 155 LPNDMLVDVQGHTDNTGPGANSPYKDNWELSTARALAVLHELILDGVDPARMSA-TGFAQ 213 Query: 318 HRLKIASDPM--NSANRRIDI 336 ++ + NRR+++ Sbjct: 214 YQPIATNATATGREKNRRVEL 234 Score = 39.6 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 51/144 (35%), Gaps = 5/144 (3%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + L +W + D M++L+ FF+++ +++ D + L Sbjct: 3 KQKCPECEECLPAWLAAFGDLMSLLLCFFVLLLSMSSMDAKKISEAIGSLSGAMSVLEGG 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 ++ ++ E + I + ++ ++ + + + ++ ++ + +Q Sbjct: 63 TQTEISKKRMLEATPI-----DIQDETSEIVNRVQQAAGDANEMMEKTQSPAITIKEAQD 117 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDL 163 K T G ++ D Sbjct: 118 GFVIKLPATLLFNPGSATIENQDA 141 >gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] gi|161323983|gb|EDP95316.1| 30S ribosomal protein S1 [Kordia algicida OT-1] Length = 347 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S ++ ++ +I ++L + ISI GHTD N +LS +RA S Sbjct: 246 FDTGKSRIKADSYEIISEITKMLKTNPNLKISIEGHTDN---AGDESYNMKLSKNRAKSV 302 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 L+ G+ E R+ GF + + + NRR+++ Sbjct: 303 LMALVDEGIDESRLKS-DGFGQTKPIGDNTTDKGKAKNRRVEL 344 >gi|242313779|ref|ZP_04812796.1| OmpA family protein [Burkholderia pseudomallei 1106b] gi|242137018|gb|EES23421.1| OmpA family protein [Burkholderia pseudomallei 1106b] Length = 558 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546 >gi|167826676|ref|ZP_02458147.1| hypothetical protein Bpseu9_23575 [Burkholderia pseudomallei 9] Length = 390 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 280 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 339 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 340 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 390 >gi|313675126|ref|YP_004053122.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312941824|gb|ADR21014.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 699 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 7/145 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 T++ + E + F+ +SS + L ++ +++ Sbjct: 554 QTINEETGEIEEDSKGVELKLQPLAKDANLTLKDIYFESNSSALFESSFEELDRVIKLMK 613 Query: 261 HSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + I HTD A N RLS +RA S + + ++E R+ G+ + Sbjct: 614 SYPSMKIEIAAHTDDV---GSAAYNTRLSQERANSVISYITGNSIAEGRLIS-KGYGESK 669 Query: 320 LKIASDPM--NSANRRIDILVEDRQ 342 +A+D + NRR+++ + D Q Sbjct: 670 PVVANDSEENRAKNRRVELKILDIQ 694 >gi|281179819|dbj|BAI56149.1| conserved hypothetical protein [Escherichia coli SE15] Length = 550 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + + + V + + + +FD + + VL Sbjct: 399 ERIRQPVLRAIRDWRPPEQKMDVTASLPVQTVRL-----DSMSLFDVGQARLKDGSTKVL 453 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + + G+TDA+ + N +LSL RA + ++++ Sbjct: 454 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + G + +D + NRR++I + R Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542 >gi|167622915|ref|YP_001673209.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167352937|gb|ABZ75550.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4] Length = 356 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 9/119 (7%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 I + +FD SS L + E L S E + +I+G+TD+ + A Sbjct: 235 QIVLPALTVISLFDFDSSELTHSGS--LAPVIERLKQSPEAIANIKGYTDS---KGNATY 289 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 N LS RA + L+ +G+ ++I ++ G+ + +D NRR+ I ++ Sbjct: 290 NQALSERRAQAVADYLIAAGIKPEQI-EVHGYGEQFPLMKNDTPEHRHENRRVLIHIQS 347 >gi|262394500|ref|YP_003286354.1| outer membrane protein [Vibrio sp. Ex25] gi|262338094|gb|ACY51889.1| outer membrane protein [Vibrio sp. Ex25] Length = 222 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 60/208 (28%), Gaps = 9/208 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +Q+ +S L + + I A Sbjct: 18 QATQRQNATTGEYETNSTTQGALIGAIAGAAIGLATGDDAKERRQHALIGAAAGGATGAG 77 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + L + GV + L ++ N F SS L+ Sbjct: 78 VGYYFDQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRG 135 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + + G+TD++ N LS RA S Q L+ V+ R Sbjct: 136 VARILVEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQNVAPGRAIA-R 191 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339 G+ ++ NRR++I + Sbjct: 192 GYGERNPICSNQTSEGRACNRRVEIQIL 219 >gi|254428132|ref|ZP_05041839.1| OmpA family protein [Alcanivorax sp. DG881] gi|196194301|gb|EDX89260.1| OmpA family protein [Alcanivorax sp. DG881] Length = 212 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 71/207 (34%), Gaps = 15/207 (7%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 + + + + ++ +++ + LA++ Sbjct: 5 HDSDAQASPVWAIFSDLMAALVGILVLLLVWVIGIQLELSQSLEQEKAKRLAEEQRRMAL 64 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA---- 260 + + I IS + +F +S PE +L + + L Sbjct: 65 EEALADPLASGRVTFHNGRIGIS-----GSVLFQLNSDQLQPEGEALLSDLVKPLQVFLS 119 Query: 261 HSTEVISIRGHTDASPFR---NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 +++ + G TD P DNW LS RA + + L++ G+ D++ + F Sbjct: 120 QHDDMLMVSGFTDDLPINRGNGRYADNWGLSAQRALTVTRTLIEQGMPADQVFAAA-FGD 178 Query: 318 HRLKIASDPM--NSANRRIDILVEDRQ 342 ++ +D + NRR+++ RQ Sbjct: 179 NQPVAPNDDADSRARNRRVELTTVPRQ 205 >gi|88810246|ref|ZP_01125503.1| OmpA-OmpF family porin [Nitrococcus mobilis Nb-231] gi|88791876|gb|EAR22986.1| OmpA-OmpF family porin [Nitrococcus mobilis Nb-231] Length = 230 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SS P L + Sbjct: 91 YMDVQEAKLREKMQGTGVSVTRQGDAIILNM---PNNVTFDIDSSSLKPAGANTLTGVAM 147 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ GHTD++ N +LS RA S L+ GV+ +RI + +G Sbjct: 148 VLKEYDQTGVNVVGHTDST---GGHAHNMKLSKKRADSVASSLIIQGVAANRI-RTAGVG 203 Query: 317 HHRLKIASDPM--NSANRRIDILVE 339 ++ + NRR++I + Sbjct: 204 PDDPIASNSTAEGRAQNRRVEITLT 228 >gi|288929697|ref|ZP_06423541.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329202|gb|EFC67789.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108] Length = 295 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 9/233 (3%) Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 ++ + + + Q + S +Q K ++ + Sbjct: 51 ELNESYRSTREQLAASQARVTSLEEQLAQQKRDYAALQGSLDKSLNNSSANNVNISKLVD 110 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + ++ ++ K + L +++ L+ ++ +K V + + IS+ D Sbjct: 111 QINESNQYIRHLVEVKSKSDSLNMVLTNNLTRSLSREELKEVDVRVLKGVVYISLADNM- 169 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIA-RDNWRLSLDR 291 ++ S L KI +++ + + G+TD P R+NW LS R Sbjct: 170 --LYKSGSYEINDRAAETLSKIAKIIMDYQDYDVLVEGNTDNVPITRENIRNNWDLSCLR 227 Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A S Q L + GV+ R++ G + NRR I++ + Sbjct: 228 ASSVVQYLQTRYGVNPKRLTAG-GRGEFNPVATNGTEVGKQRNRRTQIIITPK 279 >gi|262198395|ref|YP_003269604.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262081742|gb|ACY17711.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 193 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 8/122 (6%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIA 281 + I+ F+ ++ L E+ +L ++ ++ + ++ I + GHTD+ + A Sbjct: 72 LRDDRIEIMQQVQFEFGKAVLLEESKSLLDEVAAIMRDNPQIAKIRVEGHTDS---KGKA 128 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 N RLS +RA S L+ GV+ +R+ GF + ++D + NRR++ + Sbjct: 129 NFNLRLSRERAASVRAYLISQGVAGNRLVA-RGFGMTKPIDSNDTDDGRARNRRVEFNIV 187 Query: 340 DR 341 R Sbjct: 188 SR 189 >gi|237722039|ref|ZP_04552520.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|298483221|ref|ZP_07001400.1| flagellar motor protein MotB [Bacteroides sp. D22] gi|229448908|gb|EEO54699.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|298270538|gb|EFI12120.1| flagellar motor protein MotB [Bacteroides sp. D22] Length = 280 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 20/217 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195 Q +L RD+ K + + ++N E L L +K + ++R + +L Sbjct: 49 GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 108 Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 I + + + + + +++ D+ +F S+ Sbjct: 109 QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302 L K+ EVL T++ I GHTD P +DNW LS+ RA S ++L+K+ Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225 Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 V+ +I + SG + ++ S NRR +I+ Sbjct: 226 NVNPLQI-QPSGRGEYMPIDDNETIEGRSKNRRTEII 261 >gi|323525290|ref|YP_004227443.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001] gi|323382292|gb|ADX54383.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001] Length = 168 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 6/111 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 T +FD + S P+ V+ + +L S + I + G+TD N +LS R Sbjct: 52 PETALFDFNKSEVRPDASAVVDRSAVLLKRSKKPIIVEGYTDNV---GTLEYNQQLSEAR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 A + L+ GV +RI + G A++ ++D + NRR +I+V Sbjct: 109 AVAVGYALVARGVPMERI-RTKGNAYNNPVASNDTPEGRALNRRTEIVVRG 158 >gi|167818291|ref|ZP_02449971.1| hypothetical protein Bpse9_24346 [Burkholderia pseudomallei 91] gi|167913436|ref|ZP_02500527.1| hypothetical protein Bpse112_23310 [Burkholderia pseudomallei 112] Length = 393 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 283 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 342 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 343 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 393 >gi|149190355|ref|ZP_01868628.1| outer membrane protein [Vibrio shilonii AK1] gi|148835844|gb|EDL52808.1| outer membrane protein [Vibrio shilonii AK1] Length = 219 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 61/204 (29%), Gaps = 9/204 (4%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 Q+ +N+ T + E + + I A + Sbjct: 19 QATQRQNATTGEYETNSATKGAVIGAIAGTAVGIASGGDSRGILIGAASGAALGGGVGYY 78 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 L + + GV E L ++ N FD +S L+ + + Sbjct: 79 FDQQEKALRQELLNSGVQVERVGDNQL--LLRLENGIGFDSNSHALNSSIHNTLRGVARI 136 Query: 259 LAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + G+TD++ A+ N LS RA L+ V+ R G Sbjct: 137 LVEYPNTSLVIEGYTDST---GSAQYNQELSEKRAEQVRSFLISQNVAAGRAVA-RGNGE 192 Query: 318 HRLKIASDPMNSA--NRRIDILVE 339 ++ NRR++I + Sbjct: 193 RFPICSNSTPEGRQCNRRVEIKIL 216 >gi|169825896|ref|YP_001696054.1| chemotaxis protein motB [Lysinibacillus sphaericus C3-41] gi|168990384|gb|ACA37924.1| Chemotaxis protein motB (Motility protein B) [Lysinibacillus sphaericus C3-41] Length = 235 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 12/182 (6%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + + N ++ +K ++ L ++ + + ++ + E T Sbjct: 47 EQPAPVPSPNADSDQTPQQNSAYLKDQQELAEIKDSVDNFIAVNEMEG---QFATEMTDE 103 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIA 281 G+L++I D +FD + PE I + +++ +VL ++ I I GHTD P Sbjct: 104 GLLVTIRDS---ILFDPGQATIKPEYIPIAKELADVLVSNPPRNIVITGHTDNVPAGPNF 160 Query: 282 RDNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 N LSL RA + Y VL+ S + + S G+ +R +D + NRR+++L Sbjct: 161 SSNLELSLMRASNFYMVLLDSNSQLKSENFSA-KGYGENRAIAPNDTAEGRAKNRRVEVL 219 Query: 338 VE 339 ++ Sbjct: 220 IQ 221 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 5/140 (3%) Query: 36 VYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQ 95 YAD +T+L+A F++++ ++ D + + + F+ F EQ P S Sbjct: 2 PYADILTLLLAVFIILFASSSVDQEKLERMSAVFSQVFD-----GGTSFLEQPAPVPSPN 56 Query: 96 NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155 D + ++ ++ N + ++ ++ RDS Sbjct: 57 ADSDQTPQQNSAYLKDQQELAEIKDSVDNFIAVNEMEGQFATEMTDEGLLVTIRDSILFD 116 Query: 156 DLCKSTDLEKSINKEENYFL 175 + E +E + Sbjct: 117 PGQATIKPEYIPIAKELADV 136 >gi|167848193|ref|ZP_02473701.1| hypothetical protein BpseB_23171 [Burkholderia pseudomallei B7210] Length = 382 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 272 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 331 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 332 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 382 >gi|167589254|ref|ZP_02381642.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu] Length = 246 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 81/235 (34%), Gaps = 13/235 (5%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC---KSTDLEKS 166 + +G + + + + + + + K + Sbjct: 17 PGQVVVGGKVPDEATKAAVLQKLRDTYGAANVVDQIEIGDVATPPNWSANVQKLIGPQLK 76 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + + + ++ + + Q LA +++TL+ I G+ + G+L Sbjct: 77 QISKGQLKINGTQIDMKGEVRNEAQRQQLASDMANTLNPTYT--IKNGLRVSASEQGLLD 134 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 + R F+ S+ P+ VVL ++ L+ + GHTD N Sbjct: 135 QTLANRTIE-FETGSATLTPQGKVVLDQMAAALSKMPNRTVDLIGHTDN---SGNRASNI 190 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 LS RA + L+ G++ +++ +G + +D + NRRID V Sbjct: 191 ALSQARADAVKGYLITKGIASQQMTT-TGVGPDQPIAPNDTAEGRARNRRIDFRV 244 >gi|159045480|ref|YP_001534274.1| hypothetical protein Dshi_2940 [Dinoroseobacter shibae DFL 12] gi|157913240|gb|ABV94673.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length = 648 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 93/276 (33%), Gaps = 16/276 (5%) Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 G E + ++ + + + ++ + + + Sbjct: 374 SGELAEARAQADTLDQRLTEAERDRLLLGLAQEQLRRVEAQSAQDARRVAVLNEQVAALR 433 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + E ++ +++ E N L ++ E+ ++ + + + Sbjct: 434 TQLNSLQGLLDEASARDAEAQVQIEALGTELNTALARVAAEQRARADLEEAERRRLEAEA 493 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQKIGEV 258 L+ ++ + + G+ I ++ +FD P+ + K+ + Sbjct: 494 QDLARYRSEFFGELRDLLGGQEGVRIEGDRFVFSSSVLFDTGEVALSPQGQAEVAKVAGI 553 Query: 259 LAHS--------TEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMK-SGVSED 307 L V+ + GHTD P DNW LS RA S + L++ G+ D Sbjct: 554 LRSVADRIPEGIDWVLRVDGHTDNVPVTGGGKYADNWELSQGRALSVARFLIEDQGIPPD 613 Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 R+ +GF ++ D + NRRI++ ++ Sbjct: 614 RL-APTGFGEYQPVSLEDTPEGRALNRRIELKFTEK 648 >gi|120613283|ref|YP_972961.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1] gi|120591747|gb|ABM35187.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1] Length = 217 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 9/119 (7%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D + F + S P VL + E L ++ + I G+TD++ N LS Sbjct: 103 DIPSDISFATNRSDIQPNFAPVLDRFAEGLRNNPNAEVRIVGYTDST---GNDAINNPLS 159 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV--EDRQG 343 LDRA S L GV+ R+ ++ G +D + NRR++I V RQG Sbjct: 160 LDRATSTRNYLTARGVNGARV-QVEGRGAREPVATNDTAEGRARNRRVEIYVGERPRQG 217 >gi|116623978|ref|YP_826134.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116227140|gb|ABJ85849.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 388 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 50/143 (34%), Gaps = 7/143 (4%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + L +L + + FD S+ P + L Sbjct: 244 AKTCVLPANVKLPEGGAAARLLTFIQSPESRNTTWFTMDQIAFDSGSATLKPASQTQLNN 303 Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 I VL + V I G+TD A N RLS +RA S VL+K GV +R + Sbjct: 304 IATVLNNCPGVRLDIAGYTDNV---GSAESNLRLSRNRANSVVAVLVKEGVPRERFNA-E 359 Query: 314 GFAHHRLKIAS--DPMNSANRRI 334 G+ + + + NRR+ Sbjct: 360 GYGEEDPVADNSIEQGRAQNRRV 382 >gi|261253628|ref|ZP_05946201.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891] gi|260937019|gb|EEX93008.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891] Length = 324 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q + F +S+ ++ L ++ E L + + I G+TD A N +S Sbjct: 209 QLGSGSFKLNSTELNQDSADQLDELVEFLNTYPQANVEIIGYTDT---SGAAEYNQVVSE 265 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S L + G+ RI+ G + +++ NRR++++V Sbjct: 266 KRAESVATTLEEKGIDSSRITA-RGEGENNPIASNETREGREQNRRVEVIV 315 >gi|256823714|ref|YP_003147677.1| type IV / VI secretion system protein, DotU family [Kangiella koreensis DSM 16069] gi|256797253|gb|ACV27909.1| type IV / VI secretion system protein, DotU family [Kangiella koreensis DSM 16069] Length = 439 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 68/177 (38%), Gaps = 7/177 (3%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 ++++ ++ + + L + + + Sbjct: 250 YQLSQKAEPVYNSIASLVPENKVDLASSDSVINYAKNLRQLLSTEIGRGLLQVVEDIDHV 309 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-D 283 I I + M+ +S+ +I +++KIG++ + I + GH+D Sbjct: 310 AIIITSNQ---MYSSASAQLNENSIALIEKIGQIATTTPGHIQVVGHSDDQKIFTAKYHS 366 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 NW LSL RA S ++L ++ R++ G ++A+ D + NRR++IL+ Sbjct: 367 NWELSLARANSVVRILNQNQNLAGRVTA-EGRGAAEPRVANDTDTNRALNRRVEILL 422 >gi|167741105|ref|ZP_02413879.1| hypothetical protein Bpse14_23766 [Burkholderia pseudomallei 14] Length = 394 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 284 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 343 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 344 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 394 >gi|315281340|ref|ZP_07869986.1| chemotaxis protein MotB [Listeria marthii FSL S4-120] gi|313615016|gb|EFR88514.1| chemotaxis protein MotB [Listeria marthii FSL S4-120] Length = 275 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 87/225 (38%), Gaps = 14/225 (6%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +Q I + + D + K+ + + + + Sbjct: 47 EQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAA 106 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 +L + +++++ K+I S ++ +N+ + + + G+LI+I D +F S Sbjct: 107 ALLKKQNEEKIEAFKKQIDSYIAA---ENLGTKMTTKYSDEGLLITIRDD---ILFQSGS 160 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQV 298 + + ++IGE+ A + + GHTD P NW LS+ RA + + Sbjct: 161 AELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEA 220 Query: 299 LMKSG--VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 +++ V+ S G+ R +D NRR++I+V Sbjct: 221 IIQENSEVNPGEFSA-RGYGEFRPVAKNDIAVNREKNRRVEIMVR 264 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 70/209 (33%), Gaps = 1/209 (0%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ + +W I Y+D +T+L+A F+V++ ++ D + + F + Sbjct: 3 KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 ++ ++ P+ + N + +++E K + + + + +N + + Sbjct: 63 GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKK 122 Query: 139 QSEHCKNSLT-RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q + + K + + + LS K K L K Sbjct: 123 QIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEIGELFAQGK 182 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILI 226 + DN+ ++ + + Sbjct: 183 GTMEGIVSGHTDNVPISTSIYSSNWELSV 211 >gi|312129863|ref|YP_003997203.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132] gi|311906409|gb|ADQ16850.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132] Length = 300 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 94/307 (30%), Gaps = 38/307 (12%) Query: 42 TVL--MAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 T+L +AF + +++ +L + + D +N Q + Sbjct: 10 TLLVGLAF------TSCVSKKKFASLQSELASTKADLERRGELVNDFKNKLVACEQERDR 63 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 ++ N + Q E + E+ DL Sbjct: 64 VATTNSAKDNQIS----------------------DLKSQIEDLRRVRDTQMERVGDLTV 101 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + L K L K + L ++ L + D + + Sbjct: 102 LNRSANENINKTLAQLEKKDKYISLLQAAKSKADSLNLALAVNLKSALKDGLDDTDVDVK 161 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278 + +++ + +F S P VL+K+ ++ + + + G+TD Sbjct: 162 VDK--TVVMVNLSDKMLFTSGSYKISPRAYSVLEKVAAIIKSRPDLEVMVEGYTDNVSIN 219 Query: 279 NI-ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 DNW LS+ R+ S + L GV ++I G + ++ NRR Sbjct: 220 TACIEDNWDLSVKRSTSVVRTLQSKFGVDPNKIIAA-GRGEYNTLTSNSTAEGRAINRRT 278 Query: 335 DILVEDR 341 I++ + Sbjct: 279 RIILMPK 285 >gi|217423098|ref|ZP_03454600.1| OmpA family protein [Burkholderia pseudomallei 576] gi|217394006|gb|EEC34026.1| OmpA family protein [Burkholderia pseudomallei 576] Length = 558 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546 >gi|167740993|ref|ZP_02413767.1| OmpA family protein [Burkholderia pseudomallei 14] Length = 558 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546 >gi|85858730|ref|YP_460932.1| outer membrane porin protein [Syntrophus aciditrophicus SB] gi|85721821|gb|ABC76764.1| outer membrane porin protein [Syntrophus aciditrophicus SB] Length = 435 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 8/108 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRA 292 +F P+ +QK+ + + + +V ++ GHTD++ N +LS +RA Sbjct: 330 HILFASDKYNIEPKYDSEIQKVADYMKANPDVTAVVAGHTDSTH---SNAYNKKLSQNRA 386 Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 + L++ G+ RI + G+ + + NRR+ ++ Sbjct: 387 NAVKTALVEKYGIDASRIEAV-GYGEDKPIATNKTKAGRQKNRRVVVM 433 >gi|91794084|ref|YP_563735.1| OmpA/MotB [Shewanella denitrificans OS217] gi|91716086|gb|ABE56012.1| OmpA/MotB [Shewanella denitrificans OS217] Length = 377 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 8/154 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 ++ + + V ++ + +FD S++ P + Sbjct: 222 DADKDGVNDNIDKCPDTPMTHKVDATGCSVYEFVTKMYDLGKVLFDNDSAVIKPGYYADM 281 Query: 253 QKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRIS 310 + +G+ L + I GH N LS RA + L K G+S RI Sbjct: 282 EILGDHLVKYPAHTVIIEGHASNV---GKPDYNMSLSERRAQAVATALMTKYGISASRIK 338 Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 + G+ + K+A + + NRRI+ +V + Sbjct: 339 SV-GYGVTKPKMAGNTAEAHRVNRRIEAIVTGTE 371 >gi|323697842|ref|ZP_08109754.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132] gi|323457774|gb|EGB13639.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132] Length = 250 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 32/246 (13%), Positives = 89/246 (36%), Gaps = 18/246 (7%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD------ 156 D+ + + + F + L+ ++ + Sbjct: 3 DQEALEQQGGGPKSDPPKPDEGIPPWMATFADMVTLLLCFFVLLLSFTNQDVTNFRKLMG 62 Query: 157 -LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + ++ ++ ++ + ++ +++ +++ +L + + ++ Sbjct: 63 SIQEALGVQYEDRSAQSVPYADTTFKERQSVRENRQIVELGVILKKAIRS---KDLTHMA 119 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275 + ++G+++ + Q +FDK S E LQ + + + + + IRGHTD Sbjct: 120 KVSSDKSGVMLRLSSQL---LFDKGSVELTAEAKQALQMVIDSMKQTDFNLVIRGHTDGE 176 Query: 276 PFRNIAR-DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSAN 331 ++ NW LS RA S + +++ + R+ + G+ + + AN Sbjct: 177 TPESVQYGSNWSLSAARAASCLRYIIEHSDIPATRMKAV-GYGGSKPLLPGTSEENRQAN 235 Query: 332 RRIDIL 337 RR++ Sbjct: 236 RRVEFF 241 >gi|241764375|ref|ZP_04762401.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN] gi|241366218|gb|EER60782.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN] Length = 215 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 8/118 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288 D + F + P VL + E L E I GHTD + N LS Sbjct: 102 DIPSDISFAVGRADIQPNFAPVLDRFAEGLRAHPETDVRIVGHTDNT---GSDAVNDPLS 158 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV-EDRQG 343 ++RA S LM GV RI + G + + NRR++I V E +G Sbjct: 159 VNRASSTRNYLMNRGVDGRRI-SVEGMGERQPIATNATAEGRSRNRRVEIFVGERSRG 215 >gi|238754016|ref|ZP_04615375.1| Inner membrane lipoprotein yiaD [Yersinia ruckeri ATCC 29473] gi|238707768|gb|EEQ00127.1| Inner membrane lipoprotein yiaD [Yersinia ruckeri ATCC 29473] Length = 219 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD +SS P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDTNSSNLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N LS RA + L+ GV+ +RI I G Sbjct: 137 VLKEYEKTAVNVTGYTDST---GARAHNMILSQQRAETVGSALITQGVAANRIRTI-GAG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 + + NRR++I + Sbjct: 193 PDNPVATNSTTAGKAQNRRVEITL 216 >gi|126457554|ref|YP_001074280.1| hypothetical protein BURPS1106A_A0237 [Burkholderia pseudomallei 1106a] gi|242313025|ref|ZP_04812042.1| OmpA family protein [Burkholderia pseudomallei 1106b] gi|254195472|ref|ZP_04901900.1| OmpA domain protein [Burkholderia pseudomallei S13] gi|126231322|gb|ABN94735.1| OmpA family protein [Burkholderia pseudomallei 1106a] gi|169652219|gb|EDS84912.1| OmpA domain protein [Burkholderia pseudomallei S13] gi|242136264|gb|EES22667.1| OmpA family protein [Burkholderia pseudomallei 1106b] Length = 421 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 311 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 370 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 371 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 421 >gi|89054158|ref|YP_509609.1| OmpA/MotB [Jannaschia sp. CCS1] gi|88863707|gb|ABD54584.1| OmpA/MotB [Jannaschia sp. CCS1] Length = 219 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 10/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L + +L E T +++++ +FD S+ L+ + L Sbjct: 82 DRQAQDLRGSLSNERILIENTGEALILTL---PEGILFDVDSAAIRAGLQGDLRALAFNL 138 Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + GHTD + A N LS RA + VL++ GV+ R+ + G Sbjct: 139 NQYPDTRVVVEGHTDNT---GSASYNQDLSTRRAQAVSGVLLEGGVAPFRVQSV-GRGES 194 Query: 319 RLKIASDP--MNSANRRIDILVE 339 + NRR+++++ Sbjct: 195 APIATNLTPEGRQQNRRVEVIIR 217 >gi|53721204|ref|YP_110189.1| hypothetical protein BPSS0168 [Burkholderia pseudomallei K96243] gi|76819105|ref|YP_336847.1| hypothetical protein BURPS1710b_A1690 [Burkholderia pseudomallei 1710b] gi|126443128|ref|YP_001061334.1| hypothetical protein BURPS668_A0328 [Burkholderia pseudomallei 668] gi|134280864|ref|ZP_01767574.1| OmpA domain protein [Burkholderia pseudomallei 305] gi|217423202|ref|ZP_03454704.1| OmpA family protein [Burkholderia pseudomallei 576] gi|226198699|ref|ZP_03794263.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9] gi|254263222|ref|ZP_04954087.1| OmpA domain protein [Burkholderia pseudomallei 1710a] gi|52211618|emb|CAH37613.1| OmpA family membrane protein [Burkholderia pseudomallei K96243] gi|76583578|gb|ABA53052.1| OmpA domain protein [Burkholderia pseudomallei 1710b] gi|126222619|gb|ABN86124.1| OmpA domain protein [Burkholderia pseudomallei 668] gi|134247886|gb|EBA47970.1| OmpA domain protein [Burkholderia pseudomallei 305] gi|217394110|gb|EEC34130.1| OmpA family protein [Burkholderia pseudomallei 576] gi|225929139|gb|EEH25162.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9] gi|254214224|gb|EET03609.1| OmpA domain protein [Burkholderia pseudomallei 1710a] Length = 421 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 311 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 370 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 371 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 421 >gi|296124309|ref|YP_003632087.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776] gi|296016649|gb|ADG69888.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776] Length = 275 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 75/231 (32%), Gaps = 22/231 (9%) Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 ++ + N Q K L + + ++ + + N L K Sbjct: 43 QQYQGLAMERNQFQGNLSQLMAEKVQLEQQNATLRNGLELANQRVDNMLAANSSLEDKVK 102 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + D +++ + + +F Sbjct: 103 NMLTSSSKNPLSTDANQRMEELRRKYPDFEFDPQTGVSKFQENL-----------LFASG 151 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEV---ISIRGHTDASPFRNIA-----RDNWRLSLDRA 292 S PE +LQ+ ++ + + + GHTD P A NW LS DRA Sbjct: 152 SDEIRPEAYALLQEFARIMNSADSKHLKVLVVGHTDDKPISRKAVADKHPTNWHLSTDRA 211 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 S L KSG++E R+ G++ + + D NRR++I V Sbjct: 212 NSVVLALKKSGLAEQRMGAA-GYSLFQPLAPNSDDKNRQKNRRVEIFVLAP 261 >gi|53721134|ref|YP_110119.1| OmpA family protein [Burkholderia pseudomallei K96243] gi|52211548|emb|CAH37542.1| OmpA family membrane protein [Burkholderia pseudomallei K96243] Length = 558 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546 >gi|148546044|ref|YP_001266146.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1] gi|148510102|gb|ABQ76962.1| OmpA/MotB domain protein [Pseudomonas putida F1] Length = 247 Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 10/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A GV + I + + F S+ P L + Sbjct: 95 DKQEAELRAQMANTGVEVQRQGDQIKLIM---PGNITFATDSANIAPSFYSPLNNLAGSF 151 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I + G TD++ + N LS RA + L GV RI + G Sbjct: 152 KQFNQNTIEVVGFTDST---GSRQHNMDLSQRRAQAVSTYLTSQGVDASRI-SVRGMGPD 207 Query: 319 RLKIASDPM--NSANRRIDILVE 339 + ++ + NRR+++ ++ Sbjct: 208 QPIASNADANGRAQNRRVEVNLK 230 >gi|163753666|ref|ZP_02160789.1| outer membrane protein, peptidoglycan-associated lipoprotein [Kordia algicida OT-1] gi|161325880|gb|EDP97206.1| outer membrane protein, peptidoglycan-associated lipoprotein [Kordia algicida OT-1] Length = 626 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 81/277 (29%), Gaps = 11/277 (3%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + + +S + + TK + Sbjct: 354 DVFASKVKGDSYGAVRNLGTPLNSNSDDFSFTFDEETKKGFVASNRDGGKGSDDIYEVTL 413 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 I + + + T + G ++ + D S+ + K+ K + Sbjct: 414 INPICDVDYVVVVTDKETGAALSGANVVLADDQGNSV-GSKTTDAEGKVTFKVECDKSSR 472 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + + D+ K V +I + N FD + Sbjct: 473 LEATIQGYVPQQVDVNSGDDPTKLVEIPLAPIEEIIEDVIVLNPIYFDFDKHNIRQDAAF 532 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L K+ V+ + I + HTD R A N RLS RA S Q ++ G+ R+ Sbjct: 533 ELDKVVNVMTKYPNMVIKVETHTD---IRGSASYNQRLSERRAKSTVQYIISKGIDASRL 589 Query: 310 SKISGFAHHRLKIA-----SDPMNSANRRIDILVEDR 341 S G I ++ + NRR D ++ + Sbjct: 590 SS-EGKGESSPLIDCGNKCTEEEHQQNRRSDFIIVSK 625 >gi|86132280|ref|ZP_01050875.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85817199|gb|EAQ38382.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 287 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 8/133 (6%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGH 271 + + + + IS+ D+ +F S +L K+ V+ + + GH Sbjct: 138 QDIEINVEKGVVFISLSDK---VLFKSGSYQITSRAEEILGKVATVINSKPDFEALVEGH 194 Query: 272 TDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 TD P+ R + DNW LS RA + + L++ G + ++ G + + +D + Sbjct: 195 TDNVPYNRGVLIDNWDLSAKRATAIVRKLVELGANPAQLIAA-GRSEFVPLVPNDTPENK 253 Query: 331 --NRRIDILVEDR 341 NRR I V + Sbjct: 254 STNRRTKIYVLPK 266 >gi|160884848|ref|ZP_02065851.1| hypothetical protein BACOVA_02838 [Bacteroides ovatus ATCC 8483] gi|156109883|gb|EDO11628.1| hypothetical protein BACOVA_02838 [Bacteroides ovatus ATCC 8483] Length = 280 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 20/217 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195 Q +L RD+ K + + ++N E L L +K + ++R + +L Sbjct: 49 GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 108 Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 I + + + + + +++ D+ +F S+ Sbjct: 109 QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302 L K+ EVL T++ I GHTD P +DNW LS+ RA S ++L+K+ Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225 Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 V+ +I + SG + ++ S NRR +I+ Sbjct: 226 NVNPLQI-QPSGRGEYMPIDDNETIEGRSKNRRTEII 261 >gi|126456220|ref|YP_001074174.1| OmpA family protein [Burkholderia pseudomallei 1106a] gi|126229988|gb|ABN93401.1| OmpA family protein [Burkholderia pseudomallei 1106a] Length = 542 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 367 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 426 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 427 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 483 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 484 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 530 >gi|331648547|ref|ZP_08349635.1| putative OmpA-family membrane protein [Escherichia coli M605] gi|330908848|gb|EGH37362.1| putative outer membrane lipoprotein [Escherichia coli AA86] gi|331042294|gb|EGI14436.1| putative OmpA-family membrane protein [Escherichia coli M605] Length = 550 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 46/119 (38%), Gaps = 6/119 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDN 284 + + + +FD + + VL + + + G+TDA+ + N Sbjct: 427 VQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEKSN 483 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 +LSL RA + ++++ + G + +D + NRR++I + R Sbjct: 484 QQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVPR 542 >gi|226198818|ref|ZP_03794382.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9] gi|225929258|gb|EEH25281.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9] Length = 558 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546 >gi|254428955|ref|ZP_05042662.1| Thrombospondin type 3 repeat family [Alcanivorax sp. DG881] gi|196195124|gb|EDX90083.1| Thrombospondin type 3 repeat family [Alcanivorax sp. DG881] Length = 384 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 37/273 (13%), Positives = 82/273 (30%), Gaps = 12/273 (4%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + G + GI + E +S + D + + R Sbjct: 104 HFAGNSAFEPYVGIGAGEFRTEPNSDSSNDFKETIGTLETGFQTMLHPHFLLDVGARPYY 163 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + N + S + ++ ++ + + + Sbjct: 164 SFRTERWDAEVYAGLNFIIGGSSEKEEPAPVENVVSDSDGDGVPDERDQCANTPAGAQVD 223 Query: 190 K---RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 L D I +++ V + + + + + F + Sbjct: 224 ATGCELDDDNDSIVNSMDECPNTPAGALVDDKGCQKYLDKDVKETL-YVEFGHDKAEVRQ 282 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304 + L+ + E + + GHTD++ A N +LS RA + VL+ V Sbjct: 283 TSYPSLENLAEGMRQYPSANLVLEGHTDST---GSAAYNKKLSQQRADAVKTVLVDHYNV 339 Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRID 335 S DRI+ + G+ + + + NRR++ Sbjct: 340 SADRITTV-GYGEEKPIADNKTSEGRAENRRVE 371 >gi|254182964|ref|ZP_04889557.1| OmpA family protein [Burkholderia pseudomallei 1655] gi|184213498|gb|EDU10541.1| OmpA family protein [Burkholderia pseudomallei 1655] Length = 558 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546 >gi|254195556|ref|ZP_04901984.1| OmpA family protein [Burkholderia pseudomallei S13] gi|169652303|gb|EDS84996.1| OmpA family protein [Burkholderia pseudomallei S13] Length = 558 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546 >gi|167740414|ref|ZP_02413188.1| ompA family protein [Burkholderia pseudomallei 14] Length = 245 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 18/247 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG------ 154 + + + G + L + + N + + Sbjct: 2 AGATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPN 61 Query: 155 --KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 ++ K + + + + + + + Q LA +++ L+ I Sbjct: 62 WSANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IK 119 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 G+ + G+L + R F+ S+ P+ +L ++ LA + I GH Sbjct: 120 NGLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGH 178 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329 TD N LS RA + L+ G++ +++ +G + +D + Sbjct: 179 TDN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRA 234 Query: 330 ANRRIDI 336 NRRI+ Sbjct: 235 RNRRIEF 241 >gi|313497139|gb|ADR58505.1| OmpA/MotB domain-containing protein [Pseudomonas putida BIRD-1] Length = 239 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 10/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A GV + I + + F S+ P L + Sbjct: 87 DKQEAELRAQMANTGVEVQRQGDQIKLIM---PGNITFATDSANIAPSFYSPLNNLAGSF 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I + G TD++ + N LS RA + L GV RI + G Sbjct: 144 KQFNQNTIEVVGFTDST---GSRQHNMDLSQRRAQAVSTYLTSQGVDASRI-SVRGMGPD 199 Query: 319 RLKIASDPM--NSANRRIDILVE 339 + ++ + NRR+++ ++ Sbjct: 200 QPIASNADANGRAQNRRVEVNLK 222 >gi|13472158|ref|NP_103725.1| hypothetical protein mlr2359 [Mesorhizobium loti MAFF303099] gi|14022903|dbj|BAB49511.1| mlr2359 [Mesorhizobium loti MAFF303099] Length = 504 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 8/192 (4%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 +++G + + + + K + +I + L Sbjct: 302 TDEGDATAGALLALNPSAPVTIERASVAAPAEPVQAKPPSPIHPDTTQIDRIRAALAQQI 361 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 G+ T I++ I N +F + + + I + L I I G Sbjct: 362 AAGGLGVGTKGDFIVVEI---SNQLLFASGQAELKAQFQPIAADIAKALDAEAGPIKIVG 418 Query: 271 HTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327 HTD + + + N+ LS+ RA + ++ + R+ + G + Sbjct: 419 HTDNVKPKKSSAFKSNFDLSVARAKAVQAMIARQLKDPSRL-SVDGKGEDEPIADNATAD 477 Query: 328 -NSANRRIDILV 338 + NRR+D+++ Sbjct: 478 GRAKNRRVDVMI 489 >gi|325913887|ref|ZP_08176246.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937] gi|325539962|gb|EGD11599.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937] Length = 221 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS +K+++ K + L+ +A R ++ I R + Sbjct: 43 QLSSRLDQEVKQRQAEAQRRKTLEQALAAPLAAG----------RVTLVDGRIGIRGNVL 92 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S PE VL+ + LA E++ + G TD P DNW LS Sbjct: 93 FAFNSDELQPEGREVLKSLAAPLAQYLSAREEILMVSGFTDDRPVLGGNRRYADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 RA + + L+ GV + + F + ++ + NRR++I Sbjct: 153 QRALTVTRALIADGVPAASVFAAA-FGSQQPVDSNADEARRAKNRRVEI 200 >gi|34763974|ref|ZP_00144866.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886249|gb|EAA23533.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 172 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 10/131 (7%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 +GV +++S+ +FD + + L + + L + + I I G+ Sbjct: 48 EGVTIRREGNNLILSM---PELILFDFDKYVVKDKIKPSLSTLAKALGENKDIHIKIDGY 104 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329 TD F N LS+ RA + L+ G I I G+ + S Sbjct: 105 TD---FIGTEAYNLDLSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPADTNQTAAGRS 160 Query: 330 ANRRIDILVED 340 NRR++ ++ Sbjct: 161 RNRRVEFIISR 171 >gi|296128006|ref|YP_003635256.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109] gi|296019821|gb|ADG73057.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109] Length = 560 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 32/282 (11%), Positives = 74/282 (26%), Gaps = 15/282 (5%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 I + P LM ++ + + E ++ + Sbjct: 104 IASSWPPVNVRLMDLARDVVLHVGADSDGEP----VVAPEDWSRFRTERGTRLQMPFAAP 159 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + + + + E + S + Sbjct: 160 ADDVDALSLFFPGAPLFAQVPIIDGELPSAVHPDDVAAAEAAAATAAARASASPSATPDV 219 Query: 185 AMKRKKRLQDLAKKISSTLSGLV--ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 DL + + + L + V + + +++ +F S+ Sbjct: 220 EETAPPEELDLDAVVEAPVFPLESTTAELDGAVQTIESTEKVEVTLGSD---VLFAFDSA 276 Query: 243 IPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 PE+ + + + LA + + GHTD N LS RA + L Sbjct: 277 DLTPESADAVALVAQRLAEREAGSVEVVGHTDDQ---ADDTYNLDLSRRRAQAVADALEA 333 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 +++G + +D + NRR+ + + + Sbjct: 334 QVAGSGHRMRVAGRGESEPVVPNDSEENRALNRRVTVSLTSK 375 >gi|237716994|ref|ZP_04547475.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262405762|ref|ZP_06082312.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|229442977|gb|EEO48768.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262356637|gb|EEZ05727.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] Length = 280 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 20/217 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195 Q +L RD+ K + + ++N E L L +K + ++R + +L Sbjct: 49 GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 108 Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 I + + + + + +++ D+ +F S+ Sbjct: 109 QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302 L K+ EVL T++ I GHTD P +DNW LS+ RA S ++L+K+ Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225 Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 V+ +I + SG + ++ S NRR +I+ Sbjct: 226 NVNPLQI-QPSGRGEYMPVDDNETIEGRSKNRRTEII 261 >gi|167920717|ref|ZP_02507808.1| ompA family protein [Burkholderia pseudomallei BCC215] Length = 247 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 18/247 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG------ 154 + + + G + L + + N + + Sbjct: 4 AGATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPN 63 Query: 155 --KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 ++ K + + + + + + + Q LA +++ L+ I Sbjct: 64 WSANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IK 121 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 G+ + G+L + R F+ S+ P+ +L ++ LA + I GH Sbjct: 122 NGLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGH 180 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329 TD N LS RA + L+ G++ +++ +G + +D + Sbjct: 181 TDN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRA 236 Query: 330 ANRRIDI 336 NRRI+ Sbjct: 237 RNRRIEF 243 >gi|254299760|ref|ZP_04967209.1| OmpA family protein [Burkholderia pseudomallei 406e] gi|157809397|gb|EDO86567.1| OmpA family protein [Burkholderia pseudomallei 406e] Length = 558 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 442 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546 >gi|24216314|ref|NP_713795.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601] gi|24197586|gb|AAN50813.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601] Length = 475 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 12/141 (8%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 A V T GI IS+ N+ +FD +SS E + L++I VL Sbjct: 340 EEEDNQAAPESSPVEIRRTEEGIAISL----NSVLFDHNSSELKQEAKLELKRIASVLKK 395 Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHR 319 + I I GHTD N +LS +RA S + L + G+ E R+ G+ + Sbjct: 396 YADREIRISGHTDN---SGGEEYNRKLSRERALSVLKELRDEQGLEEKRM-SYEGYGKSK 451 Query: 320 LKIASDP--MNSANRRIDILV 338 + NRR+DI + Sbjct: 452 PIADNSTIQGRQKNRRVDITI 472 >gi|126664582|ref|ZP_01735566.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter sp. ELB17] gi|126630908|gb|EBA01522.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter sp. ELB17] Length = 373 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 93/301 (30%), Gaps = 15/301 (4%) Query: 52 WIINATDDDTKKAIEQYFNPFGKNLM------TASKGIFDEQNPPERSSQNKIDLSIDEH 105 + ATD D + Y+ A FD P + Sbjct: 78 YSSGATDFDEVRVDGTYYFAGPDRTWNPYVSVGAGHASFDGTGPSTPGINSDETRVNLGT 137 Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + +++ ++ +++ ++ + F S + + Sbjct: 138 GVRYNINDRVSLRGDLREFHGIDESTFDTMASLGISVAFTRTVGQAAPVAPAPQPPADAD 197 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + P + + L + + V + G++ Sbjct: 198 NDGVPDTRDQCPNTPRGAKVDAKGCELDSDKDGVVDSKDKCPNTAAGMKVD-KDGCEGVV 256 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDN 284 +I F +S+ ++++ + L + T + I GHTD++ A N Sbjct: 257 KTIDTFEIDVQFPLNSAEIGAAYDSQIRRVADALRANSTTYVEIAGHTDST---GAAAYN 313 Query: 285 WRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 LS RA + L V+ DR+S G+ ++ +ANRR++ ++ R Sbjct: 314 QDLSERRAAAVANRLTSTLDVNPDRVSS-KGYGEAEPIASNSTDAGRAANRRVEARIQVR 372 Query: 342 Q 342 + Sbjct: 373 R 373 >gi|260061787|ref|YP_003194867.1| outer membrane protein-like peptidoglycan-associated (lipo)protein [Robiginitalea biformata HTCC2501] gi|88785919|gb|EAR17088.1| Outer membrane protein-like peptidoglycan-associated (lipo)protein [Robiginitalea biformata HTCC2501] Length = 453 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 8/109 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 N +FD S+ P ++ V+++I +VL + I GHTD+ A N LS R Sbjct: 347 NAILFDSGSANLQPRSMGVIRQISQVLQQDGGMSLQIVGHTDSD---GDADANVALSQAR 403 Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 A + + L+ GV R+S + G ++ + NRR++ + Sbjct: 404 AEAVKKALVDVYGVDAGRLSTL-GKGESEPVSDNNSPAGKAQNRRVEFI 451 >gi|126649533|ref|ZP_01721774.1| flagellar motor protein MotB [Bacillus sp. B14905] gi|126593858|gb|EAZ87781.1| flagellar motor protein MotB [Bacillus sp. B14905] Length = 254 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 12/182 (6%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + S N ++ +K ++ L ++ + + ++ + E T Sbjct: 66 EQPSPVPSPNADSDQTPQQNSAYLKDQQELAEIKDSVDNFIAVNEMEG---QFATEMTDE 122 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIA 281 G+L++I D +FD + PE I + +++ VL ++ I I GHTD P Sbjct: 123 GLLVTIRDS---ILFDPGQATIKPEYIPIAKELAGVLVSNPPRNIVITGHTDNVPAGPNF 179 Query: 282 RDNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 N LSL RA + Y VL+ S + + S G+ +R +D + NRR+++L Sbjct: 180 SSNLELSLMRASNFYMVLLDSNSQLKSENFSA-KGYGENRAIAPNDTAEGRAKNRRVEVL 238 Query: 338 VE 339 ++ Sbjct: 239 IQ 240 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 50/147 (34%), Gaps = 5/147 (3%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 + SW + YAD +T+L+A F++++ ++ D + + + F+ F Sbjct: 10 HDEHIDESWLVPYADILTLLLAVFIILFASSSVDQEKLERMSAVFSQVFD-----GGTSF 64 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 EQ P S D + ++ ++ N + ++ ++ Sbjct: 65 LEQPSPVPSPNADSDQTPQQNSAYLKDQQELAEIKDSVDNFIAVNEMEGQFATEMTDEGL 124 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEE 171 RDS + E +E Sbjct: 125 LVTIRDSILFDPGQATIKPEYIPIAKE 151 >gi|171320878|ref|ZP_02909877.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] gi|171093863|gb|EDT38995.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] Length = 214 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 ++ F + P +L + L + + S+ G+TD++ A+ N LS + Sbjct: 103 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQLTGSVVGYTDST---GSAQLNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 RA S L + GV+ R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNALGQRGVAGGRLSA-QGMGASNPIADNATDAGRAQNRRVEIYLRAPQ 212 >gi|91202869|emb|CAJ72508.1| similar to flagellar motor protein MotB [Candidatus Kuenenia stuttgartiensis] Length = 223 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 70/194 (36%), Gaps = 11/194 (5%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA--DNI 211 G C D + +N+ + + S E + + + K + L ++I Sbjct: 18 GMTGCAELDELRVLNRRQAITIRDQSDEIARYRNQLTSMSEKIKASEEEMEKLRKLAESI 77 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRG 270 GV T G +I +FD + L+K+ L + + I G Sbjct: 78 GGGVSVRDTFEGPVILF---PEMILFDSGMATIKAHGEDALRKMARFLEENPASSLRIDG 134 Query: 271 HTDASPFRNIA---RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 HTD+ P N LS RA S + L K G ++ I+GF +R + Sbjct: 135 HTDSDPIIKTKHLWDSNHHLSAARALSVFHFLTKKGNIPEQRIHIAGFGPNRPIAPNTTP 194 Query: 328 NSA--NRRIDILVE 339 NRR++ L+ Sbjct: 195 AGKKENRRVEFLIL 208 >gi|42526179|ref|NP_971277.1| OmpA family protein [Treponema denticola ATCC 35405] gi|41816291|gb|AAS11158.1| OmpA family protein [Treponema denticola ATCC 35405] Length = 422 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 10/160 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 A + ++ + K + V D ++ E T G+ ISI F +S+I Sbjct: 270 ARAKVIEVKKIDKAAEEEIKKSVEDLNLENTTIEKTDEGLTISI----ENIQFLPNSAIL 325 Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 L+KIGE+L + I GHT + LS +RA + L++ G Sbjct: 326 RESEKEKLKKIGEILLKFPDREFLISGHT---ALAGTEEERQALSEERAAAVANYLIELG 382 Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 V + GF R A++ + NRR++I + D+ Sbjct: 383 VQKREHVYTRGFGARRPVAANNSPENMAKNRRVEITILDK 422 >gi|332878199|ref|ZP_08445928.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683937|gb|EGJ56805.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 229 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 53/142 (37%), Gaps = 8/142 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + G + GI+++ D+ + F+ + ++ L K+ VL Sbjct: 80 QAKKIEEEIPGAEVKRVDDGIVVTF-DENSGVYFETAKHNINEKSKETLNKLIAVLKEYP 138 Query: 264 EVISIR-GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 E + G+TD+ N LS RA S +G++ R + F Sbjct: 139 ETNVVVAGYTDSV---GKDEYNMGLSKRRAQSVTNYFTSNGLAASRFTT-KWFGEQNPVA 194 Query: 323 ASDP--MNSANRRIDILVEDRQ 342 + + NRR+++++ + Sbjct: 195 DNGTPEGRAKNRRVNVVIVPNE 216 >gi|304393653|ref|ZP_07375581.1| OmpA/MotB [Ahrensia sp. R2A130] gi|303294660|gb|EFL89032.1| OmpA/MotB [Ahrensia sp. R2A130] Length = 1102 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 69/201 (34%), Gaps = 9/201 (4%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 E S T SE GK + + + +Y +P + K + + Sbjct: 903 EGKAGSETEVSEIGKRVSDALPDGYRLANRLSYPIPAPAIAPKAEPKPVEAPVSMKP--E 960 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + ++ D + + I + +FD + + + +L + + + Sbjct: 961 NPIAAPKEDTPEPASEEVSAACPVDFQQILRGKKILFDNNRAFIKASSYPLLDSLVDGFS 1020 Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 ++ + I GHTDA N LS RA + + G+ D GF + Sbjct: 1021 KCSDARVMISGHTDAV---GRDAYNLSLSQSRAQAVLDYIAGKGIDVDAFEAA-GFGETK 1076 Query: 320 LKIAS--DPMNSANRRIDILV 338 + D +ANRRI I V Sbjct: 1077 PIADNATDTGRAANRRIVIEV 1097 >gi|237509510|ref|ZP_04522225.1| OmpA family membrane protein [Burkholderia pseudomallei MSHR346] gi|235001715|gb|EEP51139.1| OmpA family membrane protein [Burkholderia pseudomallei MSHR346] Length = 558 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D +F Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLF 442 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546 >gi|115375674|ref|ZP_01462929.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1] gi|310821151|ref|YP_003953509.1| OmpA-like Outer membrane domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115367322|gb|EAU66302.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1] gi|309394223|gb|ADO71682.1| OmpA-like Outer membrane domain protein [Stigmatella aurantiaca DW4/3-1] Length = 380 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + S + VL + + L + + I GH+D+ +N LS RA + Sbjct: 269 FAWNQSTLEEASFPVLDEAVQALKDNPDFRVQIEGHSDS---SGADDNNQTLSEKRAKTV 325 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ G++++R+ GF+ ++ + NRR++ +V Sbjct: 326 LDYLVAHGIAKERLVS-KGFSSSVPLDTNNTVAGRENNRRVEFVV 369 >gi|213028311|ref|ZP_03342758.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 111 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 R FD SS+ P L + VL + +++ G+TD++ N RLS Sbjct: 2 RTNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQ 58 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 RA S L+ GV RI + SG ++ + NRR++I + Sbjct: 59 RADSVASSLITQGVDASRI-RTSGMGPANPIASNSTAEGKAQNRRVEITL 107 >gi|330009105|ref|ZP_08306392.1| OmpA family protein [Klebsiella sp. MS 92-3] gi|328534943|gb|EGF61477.1| OmpA family protein [Klebsiella sp. MS 92-3] Length = 567 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 11/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + L + + + + V + + + +FD + + VL Sbjct: 396 ERLRQPVWRVIRDYRPPEKKRDVADALPVQSVRL-----DSMALFDVGQARLKDGSTKVL 450 Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + I + G+TD + + N +LSL RA + ++++ Sbjct: 451 INALVNIRARPGWLIVVTGYTDTT---GNKKANQQLSLRRAEAVRDWMLQTSDIPATCFA 507 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + G +D +ANRR++I + R Sbjct: 508 VQGLGESHPAATNDTPEGRAANRRVEISLVPR 539 >gi|213156444|ref|YP_002318864.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057] gi|213055604|gb|ACJ40506.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057] Length = 255 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++ +L ++ L E + I GHTD+ A N +LS DRA + Sbjct: 154 FESGSAVLTEAGQKILDEMAVALNKVGREKVKIVGHTDS---SGDATKNLKLSQDRALAV 210 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ + D +S G + + NRRI+ V Sbjct: 211 KNYLISKNIPADHLST-EGLGSSKPVADNTSAEGRKKNRRIEFTVL 255 >gi|126444048|ref|YP_001061161.1| OmpA family protein [Burkholderia pseudomallei 668] gi|126223539|gb|ABN87044.1| OmpA family protein [Burkholderia pseudomallei 668] Length = 558 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D +F Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLF 442 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546 >gi|99081935|ref|YP_614089.1| hypothetical protein TM1040_2095 [Ruegeria sp. TM1040] gi|99038215|gb|ABF64827.1| flagellar motor protein-like protein [Ruegeria sp. TM1040] Length = 784 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 87/273 (31%), Gaps = 18/273 (6%) Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 Q E+ + + + + K S + +++ L + L Sbjct: 513 AQEISEQRTLAEQRADLLAQARAALAEEKQISEDARRETALLNQQVAALREQLGGLQSLL 572 Query: 146 SL--TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 RD+ +G L + + KR + ++ + L Sbjct: 573 DDFKERDAAQGIQLQSLGQDLNTALARAAAEERRRRMLEEQERKRLEAERERLANEAKDL 632 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLA- 260 ++ + + G+ I + +F S+ + K+ +L Sbjct: 633 EQYRSEFFGQLRSVLGNQEGVRIEGDRFVFASEVLFALGSAELSEAGKAEIAKVARILQN 692 Query: 261 -------HSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 +I + GHTD F DNW LS RA S + ++ G+ R+ Sbjct: 693 VAAAIPDDINWIIRVDGHTDNQRFVGAGKYADNWELSQGRALSVVRYMIDELGIPPGRL- 751 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 +GF + +D + NRRI++ + +R Sbjct: 752 AANGFGEFQPVNPADTPEARAQNRRIELKLTER 784 >gi|258405280|ref|YP_003198022.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257797507|gb|ACV68444.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692] Length = 322 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 58/156 (37%), Gaps = 13/156 (8%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L S+ L + + V T T + ++ D F + + Sbjct: 160 DDLNTENYHFSNDLYYADKEVETRTVYVTNTDTPLPMADKDDVGMIFFQFDKASIQDQYT 219 Query: 250 VVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L + +L + ++ + I GHTD + N LSL RA + + ++ +S +R Sbjct: 220 DELDEYVALLRRNPQMELLIEGHTD---IIGSEKYNLDLSLQRAMAVHDYFVRHNISSER 276 Query: 309 ISKISGFAHHRLKIASDP--------MNSANRRIDI 336 + + G+ ++ + + NRR+++ Sbjct: 277 L-RTKGYGFNKPIAPNFTQNRKDNPEGRANNRRVEL 311 >gi|149178577|ref|ZP_01857164.1| OmpA/MotB [Planctomyces maris DSM 8797] gi|148842595|gb|EDL56971.1| OmpA/MotB [Planctomyces maris DSM 8797] Length = 278 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 76/216 (35%), Gaps = 12/216 (5%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + Q + + S + L +S N L L+ E+ +R L A Sbjct: 49 AMQRDQFQQSANALQHERDQLAMRAQSLESNLNIANKRLDNLNAERSEMQQRYVSLMKKA 108 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K S L G + I+ + + +F S P +L + Sbjct: 109 KGQPSPLDGEATRRFQELADKYPDFEFDPITGVSKFHSDILFSSGSDNLKPAAQEILNQF 168 Query: 256 GEVLAHSTE---VISIRGHTDASPFRNIA-----RDNWRLSLDRAYSAYQVLMKSGVSED 307 ++ + + GHTD P + R NW LS +RA S L K GV ++ Sbjct: 169 AAIMNDGNAKRLNVLVVGHTDDKPISKASTQRQHRTNWHLSTNRANSVVLTLSKFGVKQE 228 Query: 308 RISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 R+ G++ + + +D NRR++I V Sbjct: 229 RMGAA-GYSMFQPVVPNQNDSARQKNRRVEIFVLAP 263 >gi|126641351|ref|YP_001084335.1| putative outer membrane lipoprotein [Acinetobacter baumannii ATCC 17978] Length = 209 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++ +L ++ L I GHTD+ A N +LS DRA + Sbjct: 108 FESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDANKNLKLSQDRALAV 164 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ + D +S G + + NRRI+ V Sbjct: 165 KNYLISKNIPADHLST-EGLGSSKPVADNTSAEGRKKNRRIEFTVL 209 >gi|76819194|ref|YP_336761.1| OmpA family protein [Burkholderia pseudomallei 1710b] gi|76583667|gb|ABA53141.1| OmpA family membrane protein [Burkholderia pseudomallei 1710b] Length = 558 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D +F Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLF 442 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546 >gi|332519179|ref|ZP_08395646.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332045027|gb|EGI81220.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 284 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 85/223 (38%), Gaps = 9/223 (4%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + Q +N NS + DS + + + + + Sbjct: 52 QAIQERVDNYNSKINSLTQDIDGLQKDNDSRFTVSTSGTMTSNLTERQMQETLAKVDPNK 111 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 A K + + + + + N + + T ++ISI D+ +F+ S Sbjct: 112 LSQAKTLKDSMNLAIQYNLNRVIDTSSLNEDEDITVSIDETVVMISISDKM---LFNTGS 168 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVL 299 + +LQK+ +V+ + + GHTD+ +DNW LS+ RA S + L Sbjct: 169 YRVSNKANDILQKLADVINSEPSIDVMVEGHTDSRTISTPTLKDNWDLSVLRATSVVRKL 228 Query: 300 M-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 + VS +++ SG + ++ A+D S NRR I++ Sbjct: 229 QNEYSVSPEKLIA-SGRSSYQPLTANDTKDGRSKNRRTRIILL 270 >gi|90579228|ref|ZP_01235038.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14] gi|90440061|gb|EAS65242.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14] Length = 326 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 9/128 (7%) Query: 215 VLFETTRTGILI-SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHT 272 V + I ++ + R T F SS L + L I + GHT Sbjct: 188 VEEPIYVNQVTIATLEELRLTVPFAFDSSTITKGDAAKLAPFEQRLKEQDAAKIYVVGHT 247 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NS 329 D+ N LS+ RA + L + + RI G ++ + Sbjct: 248 DSR---GAESYNQTLSVKRAEAVADALRQHLKMDSTRIIA-QGRGESEPVASNQTEEGRA 303 Query: 330 ANRRIDIL 337 NRR+DI+ Sbjct: 304 QNRRVDII 311 >gi|260774919|ref|ZP_05883820.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC BAA-450] gi|260609174|gb|EEX35332.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC BAA-450] Length = 188 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F +S+ PE+ +L ++ + + + + G+TD+ A N +LS R Sbjct: 76 DSSSFALNSAELKPESKAMLAELVAFMTEFPQSTVEVVGYTDS---SGAASYNQKLSERR 132 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A S L + G+ RIS G + +++ NRR++I+V Sbjct: 133 AQSVADALEEQGIDASRISA-RGEGENNPIASNETQQGREQNRRVEIMV 180 >gi|240172204|ref|ZP_04750863.1| outer membrane protein a OmpA [Mycobacterium kansasii ATCC 12478] Length = 332 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/350 (10%), Positives = 88/350 (25%), Gaps = 31/350 (8%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M + ++ +W I A ++ ++ A Sbjct: 1 MAGTQPVSDTAPAPAHARRFRRH----PLGVAWLIALA----------VIPLLMAAIGYG 46 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 +L T + S I S + Sbjct: 47 AF-GRPTSVTAPTGDLPTLTTISSTPNASDVSWSLLSISRSGNTITLIGDFPDDNAKAAL 105 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + + + + + + +L + + + + S+ E N + Sbjct: 106 LAALRNVLTPGVTVIDQIRIDPLVRALDFANAEPVFTAGAAIPDFSLKVERNTVTLSGTA 165 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR-------- 232 +R + ++ + Sbjct: 166 ASPDQKDAVERAAKTSWPGVKIVNNIEVKGPAPTPGASPPPGSGAAGPCADLPAVINALT 225 Query: 233 -NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F P +L ++ L + +++ G++D N+ LS+ Sbjct: 226 GGAIAFKNDGVSLTPADNQILSQVAAKLKACPDARVTVNGYSDN---GGGEGINFPLSVQ 282 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + L GV+ D I+ G+ ++D + NRR++I+V Sbjct: 283 RATTVADFLAAQGVARDHITA-RGYGSANPIASNDTPEGRAKNRRVEIVV 331 >gi|183984604|ref|YP_001852895.1| outer membrane protein a OmpA [Mycobacterium marinum M] gi|183177930|gb|ACC43040.1| outer membrane protein a OmpA [Mycobacterium marinum M] Length = 332 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F P++ VL ++ + L + +++ G+TD N LS RA + Sbjct: 231 FGNDGVSLTPDSNKVLTQVVDKLRACPDAKVTVNGYTDN---SGSEGLNIPLSAQRAQTV 287 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ GV D I+ G ++D NRR++I+V Sbjct: 288 ADFLVAHGVPTDHITA-KGLGSANPIASNDTAEGRIKNRRVEIVV 331 >gi|328473002|gb|EGF43850.1| putative lipoprotein [Vibrio parahaemolyticus 10329] Length = 219 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 9/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L + GV + L ++ N F SS L+ + +L Sbjct: 80 DQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRGVARIL 137 Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + G+TD++ N LS RA S Q L+ V+ R G+ Sbjct: 138 VEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQKVAPGRAIA-RGYGER 193 Query: 319 RLKIASDPMNSA--NRRIDILVE 339 ++ NRR++I + Sbjct: 194 NPICSNQTSEGRACNRRVEIQIL 216 >gi|167896107|ref|ZP_02483509.1| ompA family protein [Burkholderia pseudomallei 7894] Length = 243 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 18/246 (7%) Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG------- 154 + + G + L + + N + + Sbjct: 1 GATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNW 60 Query: 155 -KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 ++ K + + + + + + + Q LA +++ L+ I Sbjct: 61 SANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKN 118 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272 G+ + G+L + R F+ S+ P+ +L ++ LA + I GHT Sbjct: 119 GLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHT 177 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330 D N LS RA + L+ G++ +++ +G + +D + Sbjct: 178 DN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRAR 233 Query: 331 NRRIDI 336 NRRI+ Sbjct: 234 NRRIEF 239 >gi|262278657|ref|ZP_06056442.1| outer membrane protein [Acinetobacter calcoaceticus RUH2202] gi|262259008|gb|EEY77741.1| outer membrane protein [Acinetobacter calcoaceticus RUH2202] Length = 255 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++ +L ++ L I GHTD+ A N +LS DRA + Sbjct: 154 FESGSAVLTDAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDATKNLKLSQDRALAV 210 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ + D +S G + + NRRI+ V Sbjct: 211 KNYLISKSIPADHLSA-EGLGSSKPVADNTSPEGRKKNRRIEFTVL 255 >gi|167031827|ref|YP_001667058.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1] gi|166858315|gb|ABY96722.1| OmpA/MotB domain protein [Pseudomonas putida GB-1] Length = 240 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 10/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A GV + I + + F S+ P L + Sbjct: 87 DKQEAELRAQMANTGVEVQRQGDQIKLIM---PGNITFATDSANIAPSFYSPLNNLAGSF 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I + G TD++ + N LS RA + L GV RI + G Sbjct: 144 KQFNQNTIEVVGFTDST---GSRQHNMDLSQRRAQAVSTYLTSQGVDASRI-SVRGMGPD 199 Query: 319 RLKIASDPM--NSANRRIDILVE 339 + ++ + NRR+++ ++ Sbjct: 200 QPIASNADANGRAQNRRVEVNLK 222 >gi|54307864|ref|YP_128884.1| hypothetical protein PBPRA0661 [Photobacterium profundum SS9] gi|46912290|emb|CAG19082.1| hypothetical protein PBPRA0661 [Photobacterium profundum SS9] Length = 439 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 10/147 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I L V + + FE I I + +F S+ +L KI Sbjct: 295 IQQLLQSEVERGL---LEFEEHADRIRIVLNSND---LFASGSNEVKASIAPILSKIAHT 348 Query: 259 LAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + I I GHTD P + NW LSL RA + VL R+ G Sbjct: 349 LESTNGRIMIVGHTDDKPIFTSKYPSNWHLSLARATAVANVLAMGTELRGRLWP-EGQGD 407 Query: 318 HRLKIASDP--MNSANRRIDILVEDRQ 342 + + ++NRR++I + +Q Sbjct: 408 ANPRNPNTSKANRASNRRVEIDLLYQQ 434 >gi|86136455|ref|ZP_01055034.1| flagellar motor protein [Roseobacter sp. MED193] gi|85827329|gb|EAQ47525.1| flagellar motor protein [Roseobacter sp. MED193] Length = 791 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 89/302 (29%), Gaps = 16/302 (5%) Query: 55 NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 A+D + ++ ++ D+ + Sbjct: 491 AASDQAVLQQRLLAALNAQQDAEAGAEKDRSLAQERAALLAQAQAALSDQKTVSAEAQRE 550 Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 NQ+ R + + G+DL + S + Sbjct: 551 TALLNQQVAALREQLGGLQAILDDYQARDDAQQVQLQNLGQDLNSALARAASEERRRRLL 610 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR-- 232 K + + + L ++ + ++ G+ I Sbjct: 611 EESERKRLEAEAAELASKAESLETKAQDLERYRSEFFGRLRNLLGSQEGVRIEGDRFVFA 670 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNIARD- 283 + +F S+ + K+ ++L +I + GHTD + + Sbjct: 671 SEVLFASGSADLSRAGEGEVAKVAQILQSVAAEIPPELNWIIRVDGHTDNTAMAGSEKYS 730 Query: 284 -NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 NW LS RA S + ++++ G++ DR+ +GF + D + NRRI++ Sbjct: 731 DNWELSQGRALSVVRFMIENLGIAPDRL-AANGFGEFQPVNTDDTPEARAQNRRIELKFT 789 Query: 340 DR 341 +R Sbjct: 790 ER 791 >gi|78067236|ref|YP_370005.1| OmpA/MotB family protein [Burkholderia sp. 383] gi|77967981|gb|ABB09361.1| OmpA/MotB family protein [Burkholderia sp. 383] Length = 214 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F + P +L + L + +V SI G+TD++ A+ N LS + Sbjct: 103 PSSVTFATNQYAITPAFQPLLNDLATTLNQNPQVTASIVGYTDST---GSAQLNQTLSQN 159 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + GV+ R+S G + + NRR++I + Q Sbjct: 160 RAQSVVNALAQRGVNGGRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAAQ 212 >gi|284036695|ref|YP_003386625.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283815988|gb|ADB37826.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 658 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285 S + N F+ ++ L ++ + + V + I GHTD + A N Sbjct: 547 SANETLNNLFFESGRYDLAEKSRTELDRLSVFMQANPTVAVEISGHTDD---KGDAAANL 603 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 LS RA + L K+G+ RI + G+ R + + + NRRID Sbjct: 604 ALSQKRAQAVVTYLTKAGIQPSRIKAV-GYGKARPLVPNTTDENRRLNRRID 654 >gi|302381881|ref|YP_003817704.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] gi|302192509|gb|ADL00081.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 224 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 55/146 (37%), Gaps = 10/146 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L A+ GV +++ + F + S P VL + Sbjct: 82 NYMDRQQRALEAELSGTGVGVARQGDNLVLRMPSDVT---FAVNQSNIEPRFDAVLSDVA 138 Query: 257 EVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL V+ I GHTD+ N LS RA S L+ GV +R+ ++G Sbjct: 139 GVLQEYDRSVVDIVGHTDS---SGGDAINQPLSERRALSVADALIARGVIRERLF-VAGQ 194 Query: 316 AHHRLKIASDP--MNSANRRIDILVE 339 + ++ + NRR++IL+ Sbjct: 195 SSRVPVASNATPEGRAQNRRVEILIR 220 >gi|254438169|ref|ZP_05051663.1| OmpA family protein [Octadecabacter antarcticus 307] gi|198253615|gb|EDY77929.1| OmpA family protein [Octadecabacter antarcticus 307] Length = 220 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 10/139 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + T + +++++ +FD SS L + + Sbjct: 86 EAELRQEMGSSAQIVNTGSQLIVTLPQD---ILFDTGSSALTGGLRNDLNTLAGSMNRFP 142 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 +++ GHTD + A N LS RA + VL++SGV+ +RI I G Sbjct: 143 NSTVNVIGHTD---WDGSAAFNQDLSARRAQAVSAVLIQSGVAPNRIRSI-GRGEDAPIA 198 Query: 323 A--SDPMNSANRRIDILVE 339 ++ NRR++I + Sbjct: 199 TNLNEEGKRQNRRVEITIT 217 >gi|167847521|ref|ZP_02473029.1| ompA family protein [Burkholderia pseudomallei B7210] Length = 249 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 80/242 (33%), Gaps = 18/242 (7%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG--------KDL 157 + + G + L + + N + + ++ Sbjct: 11 SSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANV 70 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 K + + + + + + + Q LA +++ L+ I G+ Sbjct: 71 QKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKNGLRV 128 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276 + G+L + R F+ S+ P+ +L ++ LA + I GHTD Sbjct: 129 SASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDN-- 185 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 N LS RA + L+ G++ +++ +G + +D + NRRI Sbjct: 186 -SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRI 243 Query: 335 DI 336 + Sbjct: 244 EF 245 >gi|293194235|ref|ZP_06609957.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus F0309] gi|292819754|gb|EFF78767.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus F0309] Length = 235 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 17/130 (13%) Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASP 276 G +I++ D +FD S + L K+ VL I GHTD+ Sbjct: 111 PVESCGTVITLED---GVLFDFGKSDIRSDAAHTLSKLATVLNDAKVPAAHIYGHTDSI- 166 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328 + N +LS +RA + L K GVS I +G+ + ++ Sbjct: 167 --SDEAFNLQLSQERADAVSAELKKDGVSA--ILDATGYGESKPVAPNENADGSDNPAGR 222 Query: 329 SANRRIDILV 338 + NRR++I + Sbjct: 223 ALNRRVEIFI 232 >gi|283956854|ref|ZP_06374327.1| outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni 1336] gi|283791580|gb|EFC30376.1| outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni 1336] Length = 319 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L K GV + RI + G+ + ++D NRR+D Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313 >gi|157415702|ref|YP_001482958.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|157386666|gb|ABV52981.1| outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|307748343|gb|ADN91613.1| Outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni M1] gi|315930990|gb|EFV09965.1| oprF membrane domain protein [Campylobacter jejuni subsp. jejuni 327] Length = 319 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L K GV + RI + G+ + ++D NRR+D Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313 >gi|148925647|ref|ZP_01809335.1| outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845657|gb|EDK22748.1| outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 319 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L K GV + RI + G+ + ++D NRR+D Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313 >gi|123444325|ref|YP_001008290.1| putative outer membrane lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091286|emb|CAL14172.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 219 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SS P L + Sbjct: 80 YMDVQEAKLREKMSGTGVSVTRQGDNIVLNM---PNNVTFDTDSSNLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N LS RA S L+ GV+ +RI + SG Sbjct: 137 VLKEYDKTAVNVTGYTDST---GARAHNMTLSQQRADSVGSALIVQGVAANRI-RTSGAG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PDNPVASNSTAAGKAQNRRVEITL 216 >gi|57238501|ref|YP_179632.1| fibronectin-binding protein [Campylobacter jejuni RM1221] gi|57167305|gb|AAW36084.1| fibronectin-binding protein [Campylobacter jejuni RM1221] gi|315058932|gb|ADT73261.1| Outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni S3] Length = 319 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L K GV + RI + G+ + ++D NRR+D Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313 >gi|15639711|ref|NP_219161.1| flagellar motor protein MotB [Treponema pallidum subsp. pallidum str. Nichols] gi|189025949|ref|YP_001933721.1| flagellar motor protein MotB [Treponema pallidum subsp. pallidum SS14] gi|3024159|sp|O07887|MOTB_TREPA RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein MotB gi|2196896|gb|AAB61254.1| MotB [Treponema pallidum] gi|3323025|gb|AAC65689.1| flagellar motor rotation protein (motB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018524|gb|ACD71142.1| flagellar motor rotation protein [Treponema pallidum subsp. pallidum SS14] gi|291060088|gb|ADD72823.1| chemotaxis protein MotB [Treponema pallidum subsp. pallidum str. Chicago] Length = 238 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 11/158 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248 ++ Q LA + +S + + + G++IS+ F SS E+ Sbjct: 81 EKGQKLATALKKAVSLFAPEIKSNKIAVTSDERGLVISLTSD---SFFYPGSSDLNVEES 137 Query: 249 IVVLQKIGEVLAHST---EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGV 304 L ++ + L+ I GHTD+ DNW LS RA L G Sbjct: 138 REALLRVAQFLSDHALAGRRFRIEGHTDSVEVPEDGSTDNWELSTRRAVRVLHYLTDFGA 197 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 E+R ++G+A R K +++ NRR+DI++ D Sbjct: 198 QENRF-SLAGYADTRAKFSNESPEGRAYNRRVDIVILD 234 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 5/76 (6%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF--NPFG 73 + +K+ A W Y+D +T+++ FF++++ D ++I +P G Sbjct: 1 MARKRRAPRGAAQG---WLTTYSDMVTLMLCFFVMLFNPTEVDITVLQSIAASIVGDPTG 57 Query: 74 KNLMTASKGIFDEQNP 89 + +S + D N Sbjct: 58 GGVSASSGRLADLGNT 73 >gi|121612147|ref|YP_001001127.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167006020|ref|ZP_02271778.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87249779|gb|EAQ72738.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 319 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L K GV + RI + G+ + ++D NRR+D Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313 >gi|86152850|ref|ZP_01071055.1| outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843735|gb|EAQ60945.1| outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 319 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L K GV + RI + G+ + ++D NRR+D Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313 >gi|86149287|ref|ZP_01067518.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|86152031|ref|ZP_01070244.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni 260.94] gi|88596498|ref|ZP_01099735.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|205356091|ref|ZP_03222858.1| outer membrane fibronectin binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|218563079|ref|YP_002344858.1| outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840069|gb|EAQ57327.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841139|gb|EAQ58388.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni 260.94] gi|88191339|gb|EAQ95311.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360785|emb|CAL35585.1| outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|205345934|gb|EDZ32570.1| outer membrane fibronectin binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|284926685|gb|ADC29037.1| outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315927426|gb|EFV06764.1| oprF membrane domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930550|gb|EFV09590.1| oprF membrane domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 319 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L K GV + RI + G+ + ++D NRR+D Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKEGRADNRRVD 313 >gi|15641208|ref|NP_230840.1| putative lipoprotein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587785|ref|ZP_01677544.1| lipoprotein, putative [Vibrio cholerae 2740-80] gi|121728252|ref|ZP_01681285.1| lipoprotein, putative [Vibrio cholerae V52] gi|147673077|ref|YP_001216765.1| putative lipoprotein [Vibrio cholerae O395] gi|153819084|ref|ZP_01971751.1| lipoprotein, putative [Vibrio cholerae NCTC 8457] gi|153823238|ref|ZP_01975905.1| lipoprotein, putative [Vibrio cholerae B33] gi|227081367|ref|YP_002809918.1| putative lipoprotein [Vibrio cholerae M66-2] gi|229505212|ref|ZP_04394722.1| outer membrane protein [Vibrio cholerae BX 330286] gi|229511118|ref|ZP_04400597.1| outer membrane protein [Vibrio cholerae B33] gi|229518237|ref|ZP_04407681.1| outer membrane protein [Vibrio cholerae RC9] gi|229608231|ref|YP_002878879.1| outer membrane protein [Vibrio cholerae MJ-1236] gi|255745601|ref|ZP_05419549.1| outer membrane protein [Vibrio cholera CIRS 101] gi|262158324|ref|ZP_06029440.1| outer membrane protein [Vibrio cholerae INDRE 91/1] gi|262169483|ref|ZP_06037175.1| outer membrane protein [Vibrio cholerae RC27] gi|298498705|ref|ZP_07008512.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9655673|gb|AAF94354.1| lipoprotein, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547949|gb|EAX58030.1| lipoprotein, putative [Vibrio cholerae 2740-80] gi|121629503|gb|EAX61929.1| lipoprotein, putative [Vibrio cholerae V52] gi|126510367|gb|EAZ72961.1| lipoprotein, putative [Vibrio cholerae NCTC 8457] gi|126519252|gb|EAZ76475.1| lipoprotein, putative [Vibrio cholerae B33] gi|146314960|gb|ABQ19499.1| putative lipoprotein [Vibrio cholerae O395] gi|227009255|gb|ACP05467.1| putative lipoprotein [Vibrio cholerae M66-2] gi|227013112|gb|ACP09322.1| putative lipoprotein [Vibrio cholerae O395] gi|229344952|gb|EEO09926.1| outer membrane protein [Vibrio cholerae RC9] gi|229351083|gb|EEO16024.1| outer membrane protein [Vibrio cholerae B33] gi|229357435|gb|EEO22352.1| outer membrane protein [Vibrio cholerae BX 330286] gi|229370886|gb|ACQ61309.1| outer membrane protein [Vibrio cholerae MJ-1236] gi|255736676|gb|EET92073.1| outer membrane protein [Vibrio cholera CIRS 101] gi|262022296|gb|EEY41005.1| outer membrane protein [Vibrio cholerae RC27] gi|262029765|gb|EEY48413.1| outer membrane protein [Vibrio cholerae INDRE 91/1] gi|297543038|gb|EFH79088.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 223 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 12/146 (8%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + D+ V+ V + + + N F +S L+ + Sbjct: 84 DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSNSYQLDSYIHKTLRGVA 138 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + + GHTD++ N LS RA S L+ GV+ R G Sbjct: 139 RILVEYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRSFLLSQGVAAGRAIA-RGN 194 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 +++ NRR++I + Sbjct: 195 GERFPLCSNNTAEGRACNRRVEIQIL 220 >gi|166711089|ref|ZP_02242296.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Xanthomonas oryzae pv. oryzicola BLS256] Length = 264 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 36/263 (13%), Positives = 81/263 (30%), Gaps = 8/263 (3%) Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 S + + + + G + R+ NN+ S + Sbjct: 7 SARTLALSGLITAFAVSAQVAAPATGGVGERPVIVEGVVPDQATKARILNNLRDTYGSAR 66 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + S + + + + L + ++ + Q Sbjct: 67 IVDRVQVESIPSPPNWGEYVAKMVSPGLKRVAAGKLEVNGQAVRISGQVVNEAQRQQVAS 126 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +L+ + + + + G+L + R F SS P + +L ++ E + Sbjct: 127 DLSLASNTSYTVTNSLKLGGSEQGVLDQTLGNRIIE-FQSGSSRLTPLGMRILDEMVEKM 185 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + I GHTD N LS RA + +++ G+ R++ + G Sbjct: 186 SQMKDARFLIIGHTDNV---GQRESNLALSQARAQAVKDYIVQKGIDGARMN-VQGKGPD 241 Query: 319 RLKIASDP--MNSANRRIDILVE 339 + + + NRRI ++ Sbjct: 242 QPVADNASPDGRARNRRIQFKIQ 264 >gi|89899024|ref|YP_521495.1| OmpA/MotB [Rhodoferax ferrireducens T118] gi|89343761|gb|ABD67964.1| OmpA/MotB [Rhodoferax ferrireducens T118] Length = 217 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 7/113 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + FD + P +L + + L+ I I GHTD++ N LS++ Sbjct: 105 PSDISFDINRFDIKPNMRPILDQFAQGLSSQPNTEIRIIGHTDST---GSDSINDPLSVN 161 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 RA SA L+ GV RI +I+G H ++ + NRRI+I + +R Sbjct: 162 RAASARDYLVARGVDGRRI-QINGRGSHEPIADNNTERGRAQNRRIEIFLAER 213 >gi|298486507|ref|ZP_07004567.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158984|gb|EFI00045.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 268 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 89/244 (36%), Gaps = 7/244 (2%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 H + + QK + + E + S G S Sbjct: 23 AGHQDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVSHY 82 Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 S E LS+E++ M +++ LA + + S ++ + T Sbjct: 83 AYLSSRYSEIARNLMLSQERLAKMDMERQRLQLALREAKLASAQQQGRWLEDQILSLATT 142 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIA 281 ++ +FD + + K+ + L + V+ I G+TD++ Sbjct: 143 ETDRGLVMTLGDVLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST---GDR 199 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 ++N +LS DRA + VLM GV E RI + G++ A+ + NRR++I+ Sbjct: 200 QENLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYSQQFPVNANASERGRAQNRRVEIVFS 258 Query: 340 DRQG 343 D +G Sbjct: 259 DEKG 262 >gi|317152528|ref|YP_004120576.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316942779|gb|ADU61830.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 352 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 8/142 (5%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGE 257 + + N+ + + + + F E I VL++ Sbjct: 212 MDQYARDVFYSNVADAPVVTPVAAPVDTMGKETITFSLHFGFDKYQITDEMIPVLEQAKI 271 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 +L + I GHTD++ N LS RA S + ++ +GV+ R+ G+ Sbjct: 272 ILDENPSASYIIAGHTDST---GPDAYNQGLSERRAGSVREWMVANGVNTSRLES-KGYG 327 Query: 317 HHRLKIASDPMNSA--NRRIDI 336 K + NRR++I Sbjct: 328 ELSPKYDNATSEGRKLNRRVEI 349 >gi|53715977|ref|YP_106445.1| hypothetical protein BMAA1914 [Burkholderia mallei ATCC 23344] gi|52421947|gb|AAU45517.1| OmpA domain protein [Burkholderia mallei ATCC 23344] Length = 426 Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 316 RGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTDNQPIKSRQFASNEALSEE 375 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 376 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 426 >gi|332667579|ref|YP_004450367.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332336393|gb|AEE53494.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 239 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 10/142 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + +++ E GI ++ Q +FD S + L+ E L + Sbjct: 93 AKKMEEDLGNTATVERVGEGIKVTFNSQL---LFDFGKSSLMESNKQTLESFAETLKQNP 149 Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I GHTD N LS +RA + L GVS R+ I G + + Sbjct: 150 DTDLLIVGHTDNV---GSDAFNQSLSENRAAAVSNHLSTFGVSSSRLK-IQGMGEKQPLV 205 Query: 323 ASDP--MNSANRRIDILVEDRQ 342 A+ + NRR++I + + Sbjct: 206 ANTTESERAQNRRVEIAIIANE 227 >gi|323524556|ref|YP_004226709.1| type IV / VI secretion system protein, DotU family [Burkholderia sp. CCGE1001] gi|323381558|gb|ADX53649.1| type IV / VI secretion system protein, DotU family [Burkholderia sp. CCGE1001] Length = 442 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 7/136 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + V + ++ R MF ++ ++ KI + Sbjct: 309 LKDEIVAGTVSVDEDAHHSSVTF---RGDAMFPPGAASVNASMAPLIAKIAAEIVKVPGK 365 Query: 266 ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + + G+TD P R+ N LS +RA Q+L SGV R+ + G + Sbjct: 366 VMVFGYTDNVPIRSRQFASNDALSAERATQVLQMLQASGVPAGRLEAV-GRGEAAPVGDN 424 Query: 325 DPM--NSANRRIDILV 338 + NRR++I V Sbjct: 425 RTAQGRAQNRRVEIAV 440 >gi|162453582|ref|YP_001615949.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] gi|161164164|emb|CAN95469.1| probable outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 323 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 104/279 (37%), Gaps = 12/279 (4%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + P + + + E + DL+ + ++ Sbjct: 48 EGAASRLAPAQLDTAKQALSRAEGAFGEEPEAPQTRDLAYIADRKAQEAEAAAALLQAQR 107 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 E+ LS Q + + + + ++ E + + E+ L ++ Sbjct: 108 DKAAAEDAFKDLSQQQLASAREALHSGQQQIERERHARAQAETAQQQAESARL--QAESA 165 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 A ++ ++ + A++ + ++ ++ + + + G++I++ +F S Sbjct: 166 RTAAEKARQEAEAARREAERVANAALASLKEIAAVKEEKRGVVITL---SGAVLFASGKS 222 Query: 243 IPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 LP L ++ L I I GHTD++ A+ N +LSL+RA + L+ Sbjct: 223 ELLPIAKEKLSQVAATLKDQGSPPIRIEGHTDST---GSAQANRKLSLERADAVKAHLIT 279 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +G+ D+I+ + G R + NRR++I+V Sbjct: 280 AGLPGDKIATV-GHGPDRPVADNSSTEGRANNRRVEIIV 317 >gi|254189637|ref|ZP_04896147.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237] gi|157937315|gb|EDO92985.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237] Length = 558 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D +F Sbjct: 383 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLF 442 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 443 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 499 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 500 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 546 >gi|299770678|ref|YP_003732704.1| OmpA/MotB domain protein [Acinetobacter sp. DR1] gi|298700766|gb|ADI91331.1| OmpA/MotB domain protein [Acinetobacter sp. DR1] Length = 255 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++ +L ++ L I GHTD+ A N +LS DRA + Sbjct: 154 FESGSAVLTDAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDATKNLKLSQDRALAV 210 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ + D +S G + + NRRI+ V Sbjct: 211 KNYLISKSIPADHLSA-EGLGSSKPVADNTSPEGRKKNRRIEFTVL 255 >gi|237740757|ref|ZP_04571238.1| outer membrane porin F [Fusobacterium sp. 2_1_31] gi|229422774|gb|EEO37821.1| outer membrane porin F [Fusobacterium sp. 2_1_31] Length = 173 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 10/132 (7%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270 +GV +++S+ +FD L + + L + + I I G Sbjct: 48 QEGVTIRREGNNLILSM---PELILFDFDKYAVKDGIKPSLATLAKALGENKDIHIKIDG 104 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328 +TD F N LS+ RA + L+ G I I G+ + Sbjct: 105 YTD---FIGTEAYNLELSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPADTNKTEAGR 160 Query: 329 SANRRIDILVED 340 S NRR++ ++ Sbjct: 161 SRNRRVEFIISR 172 >gi|26987509|ref|NP_742934.1| OmpA/MotB domain protein [Pseudomonas putida KT2440] gi|24982176|gb|AAN66398.1|AE016267_7 OmpA family protein [Pseudomonas putida KT2440] Length = 236 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 10/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A GV + I + + F S+ P L + Sbjct: 84 DKQEAELRAQMANTGVEVQRQGDQIKLIM---PGNITFATDSANIAPSFYSPLNNLAGSF 140 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I + G TD++ + N LS RA + L GV RI + G Sbjct: 141 KQFNQNTIEVVGFTDST---GSRQHNMDLSQRRAQAVSTYLTSQGVDASRI-SVRGMGPD 196 Query: 319 RLKIASDPM--NSANRRIDILVE 339 + ++ + NRR+++ ++ Sbjct: 197 QPIASNADANGRAQNRRVEVNLK 219 >gi|237742388|ref|ZP_04572869.1| outer membrane porin F [Fusobacterium sp. 4_1_13] gi|256845716|ref|ZP_05551174.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2] gi|294785038|ref|ZP_06750326.1| outer membrane porin F [Fusobacterium sp. 3_1_27] gi|229430036|gb|EEO40248.1| outer membrane porin F [Fusobacterium sp. 4_1_13] gi|256719275|gb|EEU32830.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2] gi|294486752|gb|EFG34114.1| outer membrane porin F [Fusobacterium sp. 3_1_27] Length = 182 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 10/131 (7%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 +GV +++S+ +FD + + L + + L + + I I G+ Sbjct: 58 EGVTIRREGNNLILSM---PELILFDFDKYVVKDKIKPSLSTLAKALGENKDIHIKIDGY 114 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329 TD F N LS+ RA + L+ G I I G+ + S Sbjct: 115 TD---FIGTEAYNLDLSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPADTNQTAAGRS 170 Query: 330 ANRRIDILVED 340 NRR++ ++ Sbjct: 171 RNRRVEFIISR 181 >gi|110638331|ref|YP_678540.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110281012|gb|ABG59198.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 424 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 +F +S LPE+ L ++ + ++ + GHTD N +LS +R Sbjct: 317 KHVLFVQSKDDFLPESYAELDRLVATMNQHPQITIEVSGHTDNQ---GNRDLNLKLSEER 373 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A L+ G+ RI+ + G+ + A+D NRR++ + Sbjct: 374 AIKVKDYLVSRGIEAKRIN-VKGYGPDKPISANDTEEHRRLNRRVEFEI 421 >gi|28898041|ref|NP_797646.1| putative lipoprotein [Vibrio parahaemolyticus RIMD 2210633] gi|308094661|ref|ZP_05890745.2| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|308095662|ref|ZP_05907484.2| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|308125455|ref|ZP_05775378.2| outer membrane protein [Vibrio parahaemolyticus K5030] gi|308126686|ref|ZP_05911817.2| outer membrane protein [Vibrio parahaemolyticus AQ4037] gi|28806255|dbj|BAC59530.1| putative lipoprotein [Vibrio parahaemolyticus RIMD 2210633] gi|308088657|gb|EFO38352.1| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|308091164|gb|EFO40859.1| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|308107632|gb|EFO45172.1| outer membrane protein [Vibrio parahaemolyticus AQ4037] gi|308115580|gb|EFO53120.1| outer membrane protein [Vibrio parahaemolyticus K5030] Length = 222 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 9/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L + GV + L ++ N F SS L+ + +L Sbjct: 83 DQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRGVARIL 140 Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + G+TD++ N LS RA S Q L+ V+ R G+ Sbjct: 141 VEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQKVAPGRAIA-RGYGER 196 Query: 319 RLKIASDPMNSA--NRRIDILVE 339 ++ NRR++I + Sbjct: 197 NPICSNQTSEGRACNRRVEIQIL 219 >gi|124267239|ref|YP_001021243.1| outer membrane protein [Methylibium petroleiphilum PM1] gi|124260014|gb|ABM95008.1| outer membrane protein [Methylibium petroleiphilum PM1] Length = 235 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + FD S PE VL L + + GHTD++ N LS+D Sbjct: 116 PSDISFDTGKSAIKPELRTVLDSFANGLANDPALQVRVIGHTDST---GSDAINNPLSVD 172 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L G+ RI SG H + + NRR++IL+ + + Sbjct: 173 RAQSVRDYLAGRGILPTRIET-SGRGSHEPIADNTSEAGRAKNRRVEILLREPE 225 >gi|167818176|ref|ZP_02449856.1| OmpA family membrane protein [Burkholderia pseudomallei 91] Length = 541 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 366 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 425 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 426 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 482 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 483 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 529 >gi|163801667|ref|ZP_02195565.1| Conserved hypothetical outer membrane protein [Vibrio sp. AND4] gi|159174584|gb|EDP59386.1| Conserved hypothetical outer membrane protein [Vibrio sp. AND4] Length = 216 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 11/164 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-----FDK 239 A R+ LQ + S L +A+ G+ T I + F Sbjct: 50 AQHRQSFLQIEQQSDSGELKQALAEKSKLGLDKSGCMTWISNQDKHHTGEGLVARLHFGF 109 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S P L+++ L I++ GHTD + N L L RA +A L Sbjct: 110 DHSSLTPMGKKALKQLASSLNKRDSAITVDGHTDN---KGSDGYNQDLGLRRALAASNGL 166 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 +GV + I + F ++ + NRR++I V D+ Sbjct: 167 TNAGVDNNNIV-VRSFGESEPMASNATPEGRAQNRRVEIWVADK 209 >gi|167913324|ref|ZP_02500415.1| OmpA family membrane protein [Burkholderia pseudomallei 112] Length = 542 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 367 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 426 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 427 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 483 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 484 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 530 >gi|167896753|ref|ZP_02484155.1| hypothetical protein Bpse7_23620 [Burkholderia pseudomallei 7894] Length = 389 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 279 RGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTDNQPIKSRQFASNEALSEE 338 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 339 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 389 >gi|124008000|ref|ZP_01692700.1| peptidoglycan associated periplasmic protein, putative [Microscilla marina ATCC 23134] gi|123986584|gb|EAY26383.1| peptidoglycan associated periplasmic protein, putative [Microscilla marina ATCC 23134] Length = 472 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 N FD +S+ + + L ++ ++L + +V SI HTD N +LS R Sbjct: 363 NDIYFDFNSAALKDSSFIELNRVVKMLQTNPKVKLSIEAHTDNV---GSKAKNLKLSNRR 419 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI-LVEDRQ 342 A S L + + ++R+ GF R + + + NRR+++ ++ Q Sbjct: 420 AKSVADYLKEKKIDQNRLVT-KGFGEDRPLVPNTSKKNKAKNRRVELRVIRSTQ 472 >gi|260172785|ref|ZP_05759197.1| putative flagellar motor protein MotB [Bacteroides sp. D2] Length = 256 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 86/216 (39%), Gaps = 20/216 (9%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDLA 196 Q +L RD+ K + + ++N E L L +K + ++R + +L Sbjct: 26 AQMSAQIKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINELQ 85 Query: 197 KKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 I + + + + + +++ D+ +F S+ Sbjct: 86 DMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLDK 142 Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-G 303 L K+ EVL T++ I GHTD P +DNW LS+ RA S ++L+K+ Sbjct: 143 RGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYN 202 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 V+ +I + SG + ++ NRR +I+ Sbjct: 203 VNPLQI-QPSGRGEYMPVDDNETAEGRSKNRRTEII 237 >gi|167896642|ref|ZP_02484044.1| OmpA family membrane protein [Burkholderia pseudomallei 7894] Length = 541 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 366 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 425 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 426 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 482 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 483 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 529 >gi|145219523|ref|YP_001130232.1| OmpA/MotB domain-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145205687|gb|ABP36730.1| OmpA/MotB domain protein [Chlorobium phaeovibrioides DSM 265] Length = 229 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 10/138 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 D+ V+G E I + + +F SS + ++K+ +L + Sbjct: 82 QAEEIDSQVEGARVERVGESIRVVF---DSGILFSTGSSTLTSTSRYNIEKLARILNRYS 138 Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + GHTDA N LS RA S +L GVS R+S + G+ R Sbjct: 139 NTNLVIEGHTDAI---GAESLNQTLSERRAESVANLLAGYGVSRYRLSPV-GYGETRPIA 194 Query: 323 ASDPMNSA--NRRIDILV 338 +++ NRR+++L+ Sbjct: 195 SNETEYGRRLNRRVEVLI 212 >gi|311746197|ref|ZP_07719982.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1] gi|126576424|gb|EAZ80702.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1] Length = 640 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 FD PE++ L+++ + L ++ V I GHTD N LSL R Sbjct: 535 ENIFFDFDKYDLKPESLSSLKRLLKFLKENSNVNILISGHTDNV---GSPSYNQELSLKR 591 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 A S Q L++ G+ R+ + G + + + NRRI + V Sbjct: 592 AQSVQQYLVEQGMHPGRVM-VEGKGDKEPMVPNTNSQNQALNRRITVKVL 640 >gi|99082288|ref|YP_614442.1| OmpA/MotB [Ruegeria sp. TM1040] gi|99038568|gb|ABF65180.1| OmpA/MotB [Ruegeria sp. TM1040] Length = 221 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 58/145 (40%), Gaps = 10/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 +++ + L + T +++S+ + F S+ L+K+ Sbjct: 79 RELDKQEAELRQSLDNDSISIVNTGDRLIVSLPNDLT---FATDSAAISSVVRSDLRKVA 135 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L ++ + GHTD+ A N+ LS RA + + GVS R+ +I G Sbjct: 136 GSLQRYPGSIVQVIGHTDSD---GAASYNYSLSERRANAVADEIAAGGVSYGRM-RIIGR 191 Query: 316 AHHRLKIASDPMN--SANRRIDILV 338 + ++ + NRR++I++ Sbjct: 192 GEDQPVASNLTPEGKARNRRVEIVI 216 >gi|262041576|ref|ZP_06014773.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041137|gb|EEW42211.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 488 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 11/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + L + + + + V + + + +FD + + VL Sbjct: 317 ERLRQPVWRVIRDYRPPEKKRDVADALPVQSVRL-----DSMALFDVGQARLKDGSTKVL 371 Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + I + G+TD + + N +LSL RA + ++++ Sbjct: 372 INALVNIRARPGWLIVVTGYTDTT---GNKKANQQLSLRRAEAVRDWMLQTSDIPATCFA 428 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + G +D +ANRR++I + R Sbjct: 429 VQGLGESHPAATNDTPEGRAANRRVEISLVPR 460 >gi|206580585|ref|YP_002236817.1| OmpA domain protein [Klebsiella pneumoniae 342] gi|206569643|gb|ACI11419.1| OmpA domain protein [Klebsiella pneumoniae 342] Length = 567 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 6/144 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L V + + + + + + +FD + + VL + Sbjct: 399 RQLVWRVIRDYRPPEKKKDVADALPVQSVRLDSMALFDVGQARLKDGSTKVLINALVNIR 458 Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 I + G+TD + + N +LSL RA + ++++ + G Sbjct: 459 ARPGWLIVVTGYTDTT---GNKKANQQLSLRRAEAVRDWMLQTSDIPATCFAVQGLGESH 515 Query: 320 LKIASDP--MNSANRRIDILVEDR 341 +D +ANRR++I + R Sbjct: 516 PAATNDTPEGRAANRRVEISLVPR 539 >gi|163745692|ref|ZP_02153052.1| hypothetical protein OIHEL45_08875 [Oceanibulbus indolifex HEL-45] gi|161382510|gb|EDQ06919.1| hypothetical protein OIHEL45_08875 [Oceanibulbus indolifex HEL-45] Length = 645 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 91/263 (34%), Gaps = 17/263 (6%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 N + + + QR + +++ D Sbjct: 385 EDNTTAAERRAALLAQAEQTLAEEKAVSAEAQRQTELLNQQVAELRAQLGNLQALLDDAV 444 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 +D S +L+ ++ ++E+ A + L ++ S L+ ++ + Sbjct: 445 ARDAANSVELQSLGSELNTALARVAAEERRRAEMEAAERKRLEEE-SKDLAQYRSEFFGR 503 Query: 214 GVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HST 263 + G+ I + +F + S++ + + K+ +L Sbjct: 504 LRNLLGNQEGVRIEGDRFVFSSEVLFGQGSAVLSQDGQGEIAKVAGILRSVVDDIPAEID 563 Query: 264 EVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL 320 VI + GHTD P DNW LS RA S + ++ G++ DR+ +GF ++ Sbjct: 564 WVIRVDGHTDNVPLSGFGEFADNWELSQARALSVVKYMVNFLGIAPDRL-AANGFGQYQP 622 Query: 321 KIASDPM--NSANRRIDILVEDR 341 + + NRRI++ ++ Sbjct: 623 VAEGNTEAARAQNRRIELKFTEK 645 >gi|149910946|ref|ZP_01899577.1| hypothetical protein PE36_12217 [Moritella sp. PE36] gi|149806013|gb|EDM65997.1| hypothetical protein PE36_12217 [Moritella sp. PE36] Length = 457 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 50/145 (34%), Gaps = 9/145 (6%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + + V+ + I I I +F S P +++KI L Sbjct: 317 KLEQLLQTEIMRNIVVVQELSDRIRIRITSSD---LFASGSDQINPAYQPIIRKIARTLE 373 Query: 261 HSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + I I GHTD + NW LSL RA S VL K R+ G Sbjct: 374 STQGQILITGHTDKQQIISSRYPSNWHLSLARATSIADVLAKDTRLGGRLLP-EGRGSSE 432 Query: 320 LKIASDP----MNSANRRIDILVED 340 ++ NRR++I + Sbjct: 433 PLAVDPTFSHDQHALNRRVEIDILR 457 >gi|67642544|ref|ZP_00441299.1| OmpA domain protein [Burkholderia mallei GB8 horse 4] gi|121597981|ref|YP_990526.1| hypothetical protein BMASAVP1_0927 [Burkholderia mallei SAVP1] gi|124381968|ref|YP_001025016.1| hypothetical protein BMA10229_1214 [Burkholderia mallei NCTC 10229] gi|126447715|ref|YP_001079360.1| hypothetical protein BMA10247_A2189 [Burkholderia mallei NCTC 10247] gi|166999157|ref|ZP_02265003.1| OmpA family protein [Burkholderia mallei PRL-20] gi|254176494|ref|ZP_04883152.1| OmpA domain protein [Burkholderia mallei ATCC 10399] gi|254203448|ref|ZP_04909809.1| OmpA family protein [Burkholderia mallei FMH] gi|254205327|ref|ZP_04911680.1| OmpA family protein [Burkholderia mallei JHU] gi|254299607|ref|ZP_04967056.1| OmpA domain protein [Burkholderia pseudomallei 406e] gi|254356134|ref|ZP_04972411.1| OmpA family protein [Burkholderia mallei 2002721280] gi|121225779|gb|ABM49310.1| OmpA domain protein [Burkholderia mallei SAVP1] gi|126240569|gb|ABO03681.1| OmpA domain protein [Burkholderia mallei NCTC 10247] gi|147745687|gb|EDK52766.1| OmpA family protein [Burkholderia mallei FMH] gi|147754913|gb|EDK61977.1| OmpA family protein [Burkholderia mallei JHU] gi|148025117|gb|EDK83286.1| OmpA family protein [Burkholderia mallei 2002721280] gi|157809319|gb|EDO86489.1| OmpA domain protein [Burkholderia pseudomallei 406e] gi|160697536|gb|EDP87506.1| OmpA domain protein [Burkholderia mallei ATCC 10399] gi|238523712|gb|EEP87149.1| OmpA domain protein [Burkholderia mallei GB8 horse 4] gi|243064713|gb|EES46899.1| OmpA family protein [Burkholderia mallei PRL-20] gi|261826580|gb|ABM99761.2| OmpA domain protein [Burkholderia mallei NCTC 10229] Length = 421 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 311 RGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTDNQPIKSRQFASNEALSEE 370 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 371 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 421 >gi|114763629|ref|ZP_01443023.1| hypothetical protein 1100011001335_R2601_16020 [Pelagibaca bermudensis HTCC2601] gi|114543630|gb|EAU46643.1| hypothetical protein R2601_16020 [Roseovarius sp. HTCC2601] Length = 465 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 10/213 (4%) Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 +L+ + S ++ + + Sbjct: 256 WTPVWLAGGLTLLGVCAAFAGFSFALNGSTEALRGQIAALDVAGPVTLDRPAPPPPPAPP 315 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 R + A+ +++ L + + + V E++ + + I MF +S P Sbjct: 316 APREVETAESVTAFLQPEIDEGL---VTVESSGNTLTVQI---SGANMFAPASDTLEPRF 369 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSED 307 V+ ++ L I + GH+D P N LSL RA + + ++ V Sbjct: 370 AEVVDRVAGALNEEGGQIIVAGHSDNIPINTARFPSNLALSLARAKFVMERISQTLVDSS 429 Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RIS G A ++D + NRRI++++ Sbjct: 430 RISA-EGRADREPIASNDTPEGRAKNRRIEVIL 461 >gi|237509611|ref|ZP_04522326.1| type VI secretion system OmpA/MotB family protein [Burkholderia pseudomallei MSHR346] gi|235001816|gb|EEP51240.1| type VI secretion system OmpA/MotB family protein [Burkholderia pseudomallei MSHR346] Length = 421 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 311 RGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTDNQPIKSRQFASNEALSEE 370 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 371 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 421 >gi|254189549|ref|ZP_04896059.1| OmpA domain protein [Burkholderia pseudomallei Pasteur 52237] gi|157937227|gb|EDO92897.1| OmpA domain protein [Burkholderia pseudomallei Pasteur 52237] Length = 421 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 311 RGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTDNQPIKSRQFASNEALSEE 370 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 371 RATQVMQMLQSAGVPASRLEAL-GKGGAEPIGDNRTPQGRALNRRVEITVAR 421 >gi|320535353|ref|ZP_08035469.1| OmpA family protein [Treponema phagedenis F0421] gi|320147797|gb|EFW39297.1| OmpA family protein [Treponema phagedenis F0421] Length = 437 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 12/143 (8%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + + + + I I++ D R F S LPE + I L Sbjct: 303 IKKMFSKETPDSINMRPGINTIKITMYDIR----FIADSPEILPEEKGRVDIIARALRAM 358 Query: 263 --TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 I GHT LS+ RA + L K G+ R++ G+ R Sbjct: 359 GPYTKFLIEGHTADINQPKNQ---LVLSVARADKIAEELAKRGIDASRMTTA-GYGGTRP 414 Query: 321 KIASDP--MNSANRRIDILVEDR 341 +D + NRR++I + Sbjct: 415 IAPNDTSPNRAKNRRVEITIMRD 437 >gi|262068085|ref|ZP_06027697.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693] gi|291378171|gb|EFE85689.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693] Length = 183 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 10/133 (7%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269 +GV +++S+ +FD L + + L + + I I Sbjct: 57 NQEGVTIRREGNNLILSM---PELILFDFDKYAVKEGIKPSLATLAKALGENKDIHIKID 113 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 G+TD F N LS+ RA + L+ G I I G+ + Sbjct: 114 GYTD---FIGTEAYNLDLSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPADTNQTAAG 169 Query: 328 NSANRRIDILVED 340 S NRR++ ++ Sbjct: 170 RSRNRRVEFIISR 182 >gi|189502647|ref|YP_001958364.1| hypothetical protein Aasi_1325 [Candidatus Amoebophilus asiaticus 5a2] gi|189498088|gb|ACE06635.1| hypothetical protein Aasi_1325 [Candidatus Amoebophilus asiaticus 5a2] Length = 656 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 7/143 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 +S D+ I I+ F ++ + L ++ L Sbjct: 514 KYISYKNQDHSPIISEETVVLQPIEINQTKILKNVYFKYDEYSLNKKSYIELDRLVAFLK 573 Query: 261 HSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + ++ + GHTD N +LS RA + Y+ L+++G++ DR++ G+ R Sbjct: 574 TNPDITIELEGHTDHI---GSDEYNQQLSTKRAKAIYEYLLQAGIANDRVN-YKGYGKTR 629 Query: 320 LKIASDPMN--SANRRIDILVED 340 +D NRR+ + Sbjct: 630 PIAPNDSQENQQLNRRVAFRITR 652 >gi|294782096|ref|ZP_06747422.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA] gi|294480737|gb|EFG28512.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA] Length = 183 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 10/132 (7%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270 +GV +++S+ +FD + L + + L + + I I G Sbjct: 58 QEGVTIRREGNNLILSM---PELILFDFDKYVVKDGIKPSLATLAKALGENKDIHIKIDG 114 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328 +TD F N LS+ RA + + L+ G I I G+ + Sbjct: 115 YTD---FIGTEAYNLDLSVKRARAIKEFLISKGAIGSNI-SIEGYGEQNPADTNQTAAGR 170 Query: 329 SANRRIDILVED 340 S NRR++ ++ Sbjct: 171 SRNRRVEFIISR 182 >gi|163801079|ref|ZP_02194979.1| putative lipoprotein [Vibrio sp. AND4] gi|159175428|gb|EDP60225.1| putative lipoprotein [Vibrio sp. AND4] Length = 219 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 61/208 (29%), Gaps = 9/208 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +Q+ +S L + + I A Sbjct: 15 QATQRQNATTGEYETNSTTQGALIGAIAGAAIGLAVGDNAKERRKGALIGAAAGGATGAG 74 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + L + GV E L ++ N F SS L+ Sbjct: 75 VGYYFDQQEAELRRALLNSGVQVERVGENQL--LLRMENGIGFTSSSYQLDSSIHNTLRG 132 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + + G+TD++ N LS RA S Q L+ V+ R Sbjct: 133 VARILVEYPDTSLVIDGYTDST---GSDSYNQTLSERRAESVRQYLVSQNVAAGRAIA-R 188 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVE 339 G+ ++ + NRR++I + Sbjct: 189 GYGERNPICSNQTSDGRACNRRVEIQIL 216 >gi|121602322|ref|YP_988503.1| peptidoglycan-associated lipoprotein [Bartonella bacilliformis KC583] gi|120614499|gb|ABM45100.1| peptidoglycan-associated lipoprotein [Bartonella bacilliformis KC583] Length = 174 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 40/114 (35%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + F SS+ + +L + E L I GH D N L R Sbjct: 64 DRVFFSLDSSVIEADAQRILVRQAEWLLLYPHHTIMIEGHADDR---GTREYNLALGQRR 120 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A + L+ GVS R+ +S + R + NRR+ I + +G Sbjct: 121 AIAVRDYLVSLGVSPQRMKTMS-YGKERPVAVCDDISCWNQNRRVVISITSGRG 173 >gi|238793173|ref|ZP_04636801.1| Inner membrane lipoprotein yiaD [Yersinia intermedia ATCC 29909] gi|238727546|gb|EEQ19072.1| Inner membrane lipoprotein yiaD [Yersinia intermedia ATCC 29909] Length = 219 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SS P L + Sbjct: 80 YMDVQEAKLREKMSGTGVSVTRQGDNIVLNM---PNNVTFDTDSSNLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD+ N LS RA S L+ GV+ +RI + SG Sbjct: 137 VLKEYDKTAVNVTGYTDS---SGARAHNMTLSQQRADSVGSALIVQGVAANRI-RTSGAG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PDNPVASNSTAAGKAQNRRVEITL 216 >gi|282877937|ref|ZP_06286746.1| OmpA family protein [Prevotella buccalis ATCC 35310] gi|281299938|gb|EFA92298.1| OmpA family protein [Prevotella buccalis ATCC 35310] Length = 227 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 9/146 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K++ + V + V+ V + + ++ + +F S + + L K Sbjct: 72 MDKVAQETAAQVENAKVEEVKDKNGLDAVKVTF---DSGILFASSKANLNQTSKNELAKF 128 Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 VL ++ + I + GHTD++ N LS DRA S L GV + + G Sbjct: 129 STVLKNNKDCHIDVYGHTDST---GNDGINIPLSNDRARSVVNYLKSCGVPSSQFQNVVG 185 Query: 315 FAHHRLKIASDPMNSA--NRRIDILV 338 + + NRR+++ + Sbjct: 186 QGSTQPVADNATKAGRQLNRRVEVFL 211 >gi|19703678|ref|NP_603240.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713798|gb|AAL94539.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 172 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 10/131 (7%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 +GV +++S+ +FD L + + L + + I I G+ Sbjct: 48 EGVTIRREGNNLILSM---PELILFDFDKYAVKDGIKPSLSTLAKALGENKDIHIKIDGY 104 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329 TD F N LS+ RA + L+ G I I G+ + S Sbjct: 105 TD---FIGTEAYNLDLSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPADTNQTAAGRS 160 Query: 330 ANRRIDILVED 340 NRR++ ++ Sbjct: 161 RNRRVEFIISR 171 >gi|323189288|gb|EFZ74571.1| inner membrane lipoprotein yiaD [Escherichia coli RN587/1] Length = 219 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKLAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PANPIASNSTSEGKAQNRRVEITL 216 >gi|167838085|ref|ZP_02464944.1| ompA family protein [Burkholderia thailandensis MSMB43] Length = 243 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 82/242 (33%), Gaps = 18/242 (7%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR--------DSEKGKDL 157 + + G + L + + N + + ++ Sbjct: 5 ASPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEVGDVATPPNWSANV 64 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 K + + + + ++ + + Q LA +++ L+ I G+ Sbjct: 65 QKLIGPQLKQISKGQLKIDGTQIDVKGEVRNEAQRQQLASDMANALNPTYT--IKNGLRV 122 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276 + G+L + R F+ S+ P+ +L ++ LA + I GHTD Sbjct: 123 SASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAAALAKMSNRTVEIIGHTDN-- 179 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 N LS RA + L+ G++ +++ +G + ++D + NRRI Sbjct: 180 -SGNRTSNIALSQARADAVKGYLVAKGIASQQLTT-TGVGPDQPIASNDSADGRARNRRI 237 Query: 335 DI 336 + Sbjct: 238 EF 239 >gi|167848084|ref|ZP_02473592.1| OmpA family protein [Burkholderia pseudomallei B7210] Length = 531 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 356 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 415 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 416 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 472 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 473 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 519 >gi|228964710|ref|ZP_04125817.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228794960|gb|EEM42459.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str. T04001] Length = 223 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 75/217 (34%), Gaps = 9/217 (4%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + ++ F + + L K + + + + Sbjct: 3 SKGPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTGQVDAKVMEN 62 Query: 178 LSKEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + +K + + ++ L V +N + V TG+ + I+D + Sbjct: 63 TIPDISHEKNDEKIISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---I 119 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295 FD + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 120 FDTGDANVKPEAKGIISQLVGFFQSVPNPIVVEGHTDSRPIHNEKFPSNWELSSARAANM 179 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSAN 331 L++ V + R++ + G+A + + +D N Sbjct: 180 IHHLIEVYNVDDKRLAAV-GYADTKPIVPNDS--PQN 213 >gi|189464066|ref|ZP_03012851.1| hypothetical protein BACINT_00401 [Bacteroides intestinalis DSM 17393] gi|198275155|ref|ZP_03207686.1| hypothetical protein BACPLE_01313 [Bacteroides plebeius DSM 17135] gi|298482396|ref|ZP_07000582.1| outer membrane protein [Bacteroides sp. D22] gi|189438400|gb|EDV07385.1| hypothetical protein BACINT_00401 [Bacteroides intestinalis DSM 17393] gi|198271975|gb|EDY96245.1| hypothetical protein BACPLE_01313 [Bacteroides plebeius DSM 17135] gi|298271375|gb|EFI12950.1| outer membrane protein [Bacteroides sp. D22] Length = 213 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 69/195 (35%), Gaps = 19/195 (9%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + +++ + + L ++K + K + R L ++S N Sbjct: 34 DKEKDMIENNSNYSTASIVGGSAKLVKEERDKAIQEKIEARRNKLKAIDGLSISSYKDKN 93 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269 + ++ +F S E +L + +++ I I Sbjct: 94 GKEQFKAT------------AQSEILFKFDSYELNEEAQKMLSDLCNIISEIPNTKIKII 141 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 GHTD + N LS +RA + L +G+ + I++ G + + Sbjct: 142 GHTDNI---GEKQYNIILSKNRAAAVGNYLRTAGIETNNITE-DGKGYSEPIADNTSEAG 197 Query: 328 NSANRRIDILVEDRQ 342 + NRR++I + + + Sbjct: 198 RAKNRRVEIFITNDE 212 >gi|124003886|ref|ZP_01688734.1| OmpA/MotB, putative [Microscilla marina ATCC 23134] gi|123990941|gb|EAY30408.1| OmpA/MotB, putative [Microscilla marina ATCC 23134] Length = 389 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 F+ + + LP + L K+ +L ++ I GHTD N +LS R Sbjct: 284 KNIFFEFAKARLLPASFPELDKLVNLLTTHPQIKVRIMGHTDNV---GTDTRNLQLSNRR 340 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 A S L K G+ +R+ GF R ++ NRR++ +V Sbjct: 341 AKSVVTYLKKQGIRANRL-TFKGFGESRPIDSNVTKEGRQKNRRVEFVVL 389 >gi|254848320|ref|ZP_05237670.1| lipoprotein [Vibrio cholerae MO10] gi|254844025|gb|EET22439.1| lipoprotein [Vibrio cholerae MO10] Length = 222 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 12/146 (8%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + D+ V+ V + + + N F +S L+ + Sbjct: 83 DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSNSYQLDSYIHKTLRGVA 137 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + + GHTD++ N LS RA S L+ GV+ R G Sbjct: 138 RILVEYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRSFLLSQGVAAGRAIA-RGN 193 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 +++ NRR++I + Sbjct: 194 GERFPLCSNNTAEGRACNRRVEIQIL 219 >gi|167585789|ref|ZP_02378177.1| ompA family protein [Burkholderia ubonensis Bu] Length = 166 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ F + P +L + L + +V S+ G+TD++ A N LS + Sbjct: 56 PSSVTFATNQYAITPAFTPLLNDLATTLNQNPQVTASVVGYTDST---GSAGLNQTLSQN 112 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L + GV+ R+S G + + NRR++I + Q Sbjct: 113 RAQSVVNALTQRGVAGGRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAAQ 165 >gi|187477259|ref|YP_785283.1| hypothetical protein BAV0750 [Bordetella avium 197N] gi|115421845|emb|CAJ48363.1| probable outer membrane protein [Bordetella avium 197N] Length = 216 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +K ++ + + L+ +A R ++ I + + Sbjct: 43 QLSVKLDEEVKERQAETQRRETLEQALAVPLAGG----------RVTLVDGRIGISGSVL 92 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S PE +L + E L E++ + G TD DNW LS Sbjct: 93 FALNSDQLQPEGRELLMSLAEPLKTYLQSRDEILMVSGFTDNQRVSEHNRRFSDNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 RA + + L+ +G+ + + F + ++D + NRR++I Sbjct: 153 QRALTVTRALIDAGIPASSLFAAA-FGSEQPVASNDDAEGQAKNRRVEI 200 >gi|113968495|ref|YP_732288.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4] gi|113883179|gb|ABI37231.1| OmpA/MotB domain protein [Shewanella sp. MR-4] Length = 487 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 8/145 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + G+ E I +F+ S LPE V++ + L Sbjct: 345 RVLEETELKDDRVGINLEALTDQIEAKGHVALEGLLFEYDSDKLLPEAQPVVEVLASYLK 404 Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHH 318 + + + GHTD + N LS RA + ++L G+ ++ + G H Sbjct: 405 ANPKRAFYVVGHTDD---KGNQAYNQGLSQRRAVAIVKLLTTSHGIPTQQLEAV-GIGEH 460 Query: 319 RLKIASDPMNS--ANRRIDILVEDR 341 ++ NRR+++++ Sbjct: 461 APVASNSDEAGQQQNRRVELVLRSD 485 >gi|332525185|ref|ZP_08401360.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus JA2] gi|332108469|gb|EGJ09693.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus JA2] Length = 211 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + F + P VL + + L T + I GHTD++ N LSL R Sbjct: 103 PSDLSFAVGRADLQPSLRPVLDQFAKGL-DQTMHVRIVGHTDST---GSDAINDPLSLAR 158 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 A + L GV R+ +I+G + D + NRR++I + + Sbjct: 159 ARTVRDYLEDRGVPAARL-EIAGRGSREPVADNGSDAGRAKNRRVEIFLREP 209 >gi|254262577|ref|ZP_04953442.1| OmpA family protein [Burkholderia pseudomallei 1710a] gi|254213579|gb|EET02964.1| OmpA family protein [Burkholderia pseudomallei 1710a] Length = 542 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D +F Sbjct: 367 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLF 426 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 427 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 483 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 484 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 530 >gi|253572950|ref|ZP_04850347.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|254885124|ref|ZP_05257834.1| lipoprotein PG3 [Bacteroides sp. 4_3_47FAA] gi|251837477|gb|EES65571.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|254837917|gb|EET18226.1| lipoprotein PG3 [Bacteroides sp. 4_3_47FAA] Length = 213 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 19/195 (9%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + +++ + + L ++K + K + R L ++S N Sbjct: 34 DKEKDMIENNSNYSTASIVGGSAKLVKEERDKAIQEKIEARRNKLKAIDGLSISSYKDKN 93 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269 + ++ +F S E +L + ++ I I Sbjct: 94 GKEQFKAT------------AQSEILFKFDSYELNEEAQKMLSNLCNIITEIPNTKIKII 141 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 GHTD + N LS +RA + L +G+ + I++ G + + Sbjct: 142 GHTDNI---GEKQYNIILSKNRAAAVGNYLRTAGIETNNITE-DGKGYSEPIADNTSEAG 197 Query: 328 NSANRRIDILVEDRQ 342 + NRR++I + + + Sbjct: 198 RAKNRRVEIFITNDE 212 >gi|254784323|ref|YP_003071751.1| HAD-superfamily hydrolase subfamily IA, variant 3 [Teredinibacter turnerae T7901] gi|237683781|gb|ACR11045.1| HAD-superfamily hydrolase subfamily IA, variant 3 [Teredinibacter turnerae T7901] Length = 373 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 71/208 (34%), Gaps = 21/208 (10%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + YL + ++ + +D+ P+ Sbjct: 169 LSYLWGGSDAPRKSGAVRAKDTDNDGVPDPSDV-----CANTPSGAPVDTRGCALDTDAD 223 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + D +T + L D+ V T ISI + N FD S++ PE Sbjct: 224 GVADYLDNCPATAARLKVDDRGCPVTLSET-----ISINLKVN---FDSGSAVVKPEFFS 275 Query: 251 VLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDR 308 ++K+ + +A I+GHTD S A N LS RA + VL+ + GV+ R Sbjct: 276 EIRKVADFMAQYENTRVEIQGHTDTSC---AAAYNKSLSQRRASAVAAVLISEYGVAASR 332 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRI 334 + G+ + NRR+ Sbjct: 333 VDA-RGYGEEQPIADESTAAGRLANRRV 359 >gi|162448691|ref|YP_001611058.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] gi|161159273|emb|CAN90578.1| Probable outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 351 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 87/291 (29%), Gaps = 17/291 (5%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + Q + + + D+ +S++ + + E +++ I + Sbjct: 46 VRQGLYDEARAEIQRERDAGDKARAEAQSARAEAQSARAEAAQRSAQVAAIKEELARLSD 105 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 ++ + L ++L + LS E Sbjct: 106 DLRARDLRLSEATTAEAGLARRLDELIAMNEELSARLRSAGQSVGQLAGERGSLSAELAE 165 Query: 185 AMKRKKRLQDLAKK-------ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + L+ I + L V ++I + +F Sbjct: 166 TRAKLDDLRRKQAAAEARAAGIRDAVDRLKGAAFAGKVRVGLRAGQLVIEVPSD---ALF 222 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF---RNIARDNWRLSLDRAY 293 + + + PE L I VL + HTD +W LS RA Sbjct: 223 NGARAELTPEGRAALDDIAGVLRTMPAFRFQVAAHTDNDRKAMKSARFSSSWDLSAARAT 282 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + + L++ G+S +S + G+ +D + NRR++ILV Q Sbjct: 283 AVVKRLVERGMSPRGLSTV-GYGEFSPVGPNDTEAGRARNRRVEILVVAEQ 332 >gi|163788219|ref|ZP_02182665.1| putative flagellar motor protein MotB [Flavobacteriales bacterium ALC-1] gi|159876539|gb|EDP70597.1| putative flagellar motor protein MotB [Flavobacteriales bacterium ALC-1] Length = 285 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 78/243 (32%), Gaps = 10/243 (4%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 + + + K + E + + K T+L Sbjct: 28 EAQQKETQDLLNTATVKLNSCLSDAAAANARVEAMKEQLADMRKSNDALIKSSQDLTELT 87 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD--NIVKGVLFETTRT 222 L L + + + + L + ++ L + + + Sbjct: 88 SQGATNLEKSLESLRESNLKITRLQDALTRKDSVTLAIVTSLKKEVGINDSDIEINVEKG 147 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIA 281 + ISI D+ +F S +L K+ +V+ + + HTD + Sbjct: 148 VVFISIADKL---LFKSGSYNVTDRANEILGKVAKVINSKPDFEAMVESHTDNKSYSKPP 204 Query: 282 R-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 DNW LS+ RA + +VL V+ ++ G + + + +D + NRR I+V Sbjct: 205 LLDNWDLSVKRATAIVRVLESLNVNPQQLIAA-GRSSYVPLVENDTAENRAKNRRTRIVV 263 Query: 339 EDR 341 + Sbjct: 264 LPK 266 >gi|298530630|ref|ZP_07018032.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510004|gb|EFI33908.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 241 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 69/156 (44%), Gaps = 8/156 (5%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 +++ R++DL + + + + GI + + +F + + P Sbjct: 86 EKEDRIKDLLFPEEELPPEISKSTLEENLEILMRPEGIALMMT---GELLFPFAETRLQP 142 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + +L ++ ++ +++ G+TD P I DN+ + +RA + + L+ + V + Sbjct: 143 QARQILDQVIPLVKAWPAPVNVAGYTDNIP--GIHMDNYEFAAERAMAVMEYLLINDVKQ 200 Query: 307 DRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 R+ +S + H ++ + NRR++IL++ Sbjct: 201 QRL-SVSAYGEHFPVGDNETEEGRARNRRVEILLKK 235 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 38/119 (31%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + W ++D +TV++ FF+++ + + D + + I F L Sbjct: 3 RRKSKKGGAPKPIWMFTFSDLVTVMLTFFVLVLSMASLDREYVQEIVTVFQQDTGFLTPK 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + G ++ +++ + + LE N+ L + Sbjct: 63 TAGRLPDEFVIIEDVLENPWEILEKEDRIKDLLFPEEELPPEISKSTLEENLEILMRPE 121 >gi|313205096|ref|YP_004043753.1| ompa/motb domain protein [Paludibacter propionicigenes WB4] gi|312444412|gb|ADQ80768.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4] Length = 426 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 98/308 (31%), Gaps = 22/308 (7%) Query: 49 LVMWI------INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSI 102 ++M+ + + + + G L + D S++ D Sbjct: 121 VLMYASINLMNLLVPNRTAFWSKMNIYGDAGVGLGFYQFKLTDATGNVIVDSRDLGDGVP 180 Query: 103 DEHITKNSVDLK---IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 + + K ++L+ + + Q + L S+ ++LT Sbjct: 181 ETPMAKLGLNLEYNISRTIALGGEVQYRYYDRTNLGGYTMSKGNSDALTATIGLKFKFGA 240 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA-----KKISSTLSGLVADNIVKG 214 + + + N + P + I + + ++ + + + +L+ + Sbjct: 241 TGSKQHARNISMCEYYPQPAPVIIEKIVKDNTIETINRLNALEAKNDSLNAKIKKMNDDL 300 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHT 272 +R+ + F+ S + L +I L + + + G+T Sbjct: 301 DSISNSRSNEPGVLKSSFQNIEFEFGSDKLTTNSYATLDQIALTLKDKSAKVRLSVAGYT 360 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330 D + N LS+ RA S L+ GV + I+G+ ++ A Sbjct: 361 D---YIGTEEYNQILSVKRANSVRIYLLNKGVPASSV-TITGYGEKDPVANNNTDKGRQA 416 Query: 331 NRRIDILV 338 NRR++ + Sbjct: 417 NRRVEFQI 424 >gi|260891212|ref|ZP_05902475.1| OmpA family protein [Leptotrichia hofstadii F0254] gi|260859239|gb|EEX73739.1| OmpA family protein [Leptotrichia hofstadii F0254] Length = 172 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 5/108 (4%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 N FD +S+ E L+K+ + + + ISI G+TD+ + N LSL Sbjct: 65 DANQLKFDFNSATIKEEYTPALKKLKDYIEAKNQKISIIGYTDS---KGTREYNRELSLR 121 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 RA S + L+ G+S +RI + G +D NRRI+I Sbjct: 122 RAESLEEKLIDLGLSPERIIETKGNGDANPVATNDTEEGRAANRRIEI 169 >gi|260911422|ref|ZP_05918013.1| lipoprotein PG3 [Prevotella sp. oral taxon 472 str. F0295] gi|260634469|gb|EEX52568.1| lipoprotein PG3 [Prevotella sp. oral taxon 472 str. F0295] Length = 225 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 6/149 (4%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 K + V T G+ + + +F + ++ + L K Sbjct: 68 KHMDKVAKRTAEQVKSAKVEEVTDANGLKAVKVTFDSGILFATNKAVLSQSSKNELAKFS 127 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +VL + + + I GHTD + N LS RA S L GV + K+ G Sbjct: 128 QVLKENRDCHVDIYGHTDNT---GNDGINIPLSNSRAQSVVNYLSNCGVPRGQFQKVEGK 184 Query: 316 AHHRLKIASDPM--NSANRRIDILVEDRQ 342 ++ NRR+++ + + Sbjct: 185 GSSEPVASNASASGRQQNRRVEVYLYASK 213 >gi|238757311|ref|ZP_04618497.1| Inner membrane lipoprotein yiaD [Yersinia aldovae ATCC 35236] gi|238704350|gb|EEP96881.1| Inner membrane lipoprotein yiaD [Yersinia aldovae ATCC 35236] Length = 226 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SS P L + Sbjct: 87 YMDVQEAKLREKMSGTGVSVTRQGDNIVLNM---PNNVTFDTDSSNLKPAGANTLTGVAM 143 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N LS RA S L+ GV+ +RI + SG Sbjct: 144 VLKEYDKTAVNVTGYTDST---GARAHNMTLSQQRADSVGSTLIVQGVAANRI-RTSGAG 199 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 + + NRR++I + Sbjct: 200 PDNPVATNSTAAGKAQNRRVEITL 223 >gi|237744058|ref|ZP_04574539.1| outer membrane porin F [Fusobacterium sp. 7_1] gi|256028141|ref|ZP_05441975.1| Outer membrane porin F [Fusobacterium sp. D11] gi|260494357|ref|ZP_05814488.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33] gi|289766078|ref|ZP_06525456.1| outer membrane porin F [Fusobacterium sp. D11] gi|229431287|gb|EEO41499.1| outer membrane porin F [Fusobacterium sp. 7_1] gi|260198503|gb|EEW96019.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33] gi|289717633|gb|EFD81645.1| outer membrane porin F [Fusobacterium sp. D11] Length = 182 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 10/131 (7%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 +GV +++S+ +FD I + L + + L + + I I G+ Sbjct: 58 EGVTIRREGNNLILSM---PELILFDFDKYIVKDKIKPSLSTLAKALGENKDIHIKIDGY 114 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329 TD F N LS+ RA + L+ G I I G+ + S Sbjct: 115 TD---FIGTEAYNLELSVKRANAIKDFLISRGAIGSNI-SIEGYGEQNPADTNQTAAGRS 170 Query: 330 ANRRIDILVED 340 NRR++ ++ Sbjct: 171 RNRRVEFIISR 181 >gi|242280306|ref|YP_002992435.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] gi|242123200|gb|ACS80896.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] Length = 250 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 55/114 (48%), Gaps = 6/114 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIAR--DNWRLS 288 + +F+ + ++ + ++H + I+I+G+TD + + +R DNW +S Sbjct: 133 PSDVLFNPGQVQLSEKGRNAVKALKNFFISHPDQYINIKGYTDDTQPSSKSRLKDNWEIS 192 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA + + LMK G+ +R++ +G + ++ NRR++ +++ Sbjct: 193 SLRAVNVLRYLMKLGIKPNRLTA-TGLGEMDPLVPNNSKRNRQRNRRVEFVLDK 245 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 17/36 (47%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 W +AD +L+ FF++++ ++ D Q Sbjct: 25 WITTFADLSMLLLVFFILLYSMSEIDAKKFDMTFQS 60 >gi|254438848|ref|ZP_05052342.1| OmpA family protein [Octadecabacter antarcticus 307] gi|198254294|gb|EDY78608.1| OmpA family protein [Octadecabacter antarcticus 307] Length = 743 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 94/294 (31%), Gaps = 17/294 (5%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + + + + ++ D + + + Sbjct: 452 QELSSAAAQRDTFSDDLAAAVAALATAQAQTGVAGADADRKAALLALANNALTQEQALSS 511 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 QR + + + E + + E D+ + +E L E+ Sbjct: 512 DNQRQVALLNEQVAALRGEMGRLQALLNLENDADVMANVQIETLTQNLNTAMARALLAER 571 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKS 240 + + L+ +A + + L +D + G+ I + +F++ Sbjct: 572 RARVLEEAELERMAAE-AVELERYRSDFLGLLRNILEDVDGVRIQGDRFVFSSEVLFEQG 630 Query: 241 SSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNI--ARDNWRLSLD 290 ++ E + K+ +L VI + GHTD P +NW LS Sbjct: 631 AAQLSGEGQREIAKVATILRDVAGDIPESIDWVIRVDGHTDNVPLSGAGEFANNWELSQA 690 Query: 291 RAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA S ++ + +R+ +GF ++ ++ + NRRI++ + +R Sbjct: 691 RALSVVLYMVNFLAIPPERL-AANGFGQYQPINPANTTEARAQNRRIELKLTER 743 >gi|124005143|ref|ZP_01689985.1| outer membrane protein, putative [Microscilla marina ATCC 23134] gi|123989395|gb|EAY28956.1| outer membrane protein, putative [Microscilla marina ATCC 23134] Length = 329 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ + L ++ ++L I I HTD+ N RLS RA S Sbjct: 226 FATKSARLNTHSFEELGRVVKLLKDHPTSHILIEAHTDSD---GTRLANLRLSQQRAKSV 282 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 Y LMK G++ R+ G + ++ + NRR +++V + Sbjct: 283 YNYLMKQGIAAQRLQT-RGAGELKPIAPNNTEINKARNRRFELIVMKK 329 >gi|325103802|ref|YP_004273456.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] gi|324972650|gb|ADY51634.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] Length = 633 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 FD + ++ L + + L + I I+GHTD + N+ LS +R Sbjct: 526 KNIFFDTNKYDIKDDSKSELAILIDFLNENKTVNIEIQGHTDNI---GDDKANFVLSENR 582 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A S + L+ G+ R+ + GF ++D + NRR + L+ Sbjct: 583 AKSVLKYLVNEGIDSKRL-RYKGFGETAPIDSNDNIIGRANNRRTEFLI 630 >gi|255263223|ref|ZP_05342565.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62] gi|255105558|gb|EET48232.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62] Length = 725 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 92/262 (35%), Gaps = 16/262 (6%) Query: 95 QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154 ++++ + + + ++ +L +Q + T Sbjct: 465 EDRLTEAEQQETLLAAARARLAEEQAISDEGQLRIEALNQQVAQLRTQLASLQTLLDVAS 524 Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 + S +++ + N L +++E+ + ++ + + + L ++ + Sbjct: 525 EQDAASDVEIQALGAQLNAALARVAQEQRKRAELEEAERKRLEAEAQDLERYRSEFFGQL 584 Query: 215 VLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTE 264 + G+ I + +F S+ + K+ +L Sbjct: 585 RDLLEGQDGVRIEGDRFVFASEVLFRPGSADLSDAGRDEIAKVAGILRGVASEIPPSINW 644 Query: 265 VISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK 321 VI + GHTD +P +NW LS RA S ++ G+ +R+ +GF ++ Sbjct: 645 VIRVDGHTDNTPLSGLGQFANNWELSQARALSVVLYMVNFLGIPPNRL-AANGFGQYQPV 703 Query: 322 I--ASDPMNSANRRIDILVEDR 341 SD + NRRI++ +R Sbjct: 704 TNGDSDQARAQNRRIELKFTER 725 >gi|213964278|ref|ZP_03392508.1| OmpA family protein [Capnocytophaga sputigena Capno] gi|213953085|gb|EEB64437.1| OmpA family protein [Capnocytophaga sputigena Capno] Length = 949 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 ++ FD S + L + L + + + GH D N LS Sbjct: 315 KSNVYFDFDKSNIRSDAKNTLDGLLNFLCFNQHLNMVLTGHADDR---GSLDYNQALSER 371 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 RA + + G+ +RI ISG + + + NRR++I Sbjct: 372 RAQAVKDFFIAGGLDPNRIK-ISGEGEGNPAVKGNTEEAYQKNRRVEI 418 >gi|88802038|ref|ZP_01117566.1| outer membrane protein [Polaribacter irgensii 23-P] gi|88782696|gb|EAR13873.1| outer membrane protein [Polaribacter irgensii 23-P] Length = 450 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 33/290 (11%), Positives = 82/290 (28%), Gaps = 17/290 (5%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 +++ F+ + S G+ + + D Sbjct: 165 GVKKGFSQNVATHVQHSIGLVIKFGGTDTDGDGVYDKFDACPEVVGLEQFNGCPDADGDG 224 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL-SKEK 182 + ++ ++ C ++ D+C K + K+ Sbjct: 225 VKDSDDACPEVAGLVAMNGCPDADGDGIADKDDMCPDEKGTKGNKGCPDTDGDGTFDKDD 284 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR---TGILIS------IIDQRN 233 + + ++ + + +I+ + Sbjct: 285 KCSDVAGPTANAGCPWPDTDGDSILDKDDKCPTVAGIASEGGCPEVITNEAKMGMDTFAE 344 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 +F S+ L + ++ + +IRG+TD N +LS RA Sbjct: 345 AILFTLESANFQRGVRKDLDGMLAIINEFPQANFAIRGYTD---VSGSVSGNLKLSNSRA 401 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 + L+K+G+ R+ ++GF ++ NRR+++ V + Sbjct: 402 NAVKDYLVKNGIDAARL-TVAGFGQESPTASNKTRAGRIQNRRVEVKVTN 450 >gi|222054197|ref|YP_002536559.1| peptidoglycan-associated lipoprotein [Geobacter sp. FRC-32] gi|221563486|gb|ACM19458.1| peptidoglycan-associated lipoprotein [Geobacter sp. FRC-32] Length = 194 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 12/181 (6%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 +K + K E +PP++ EK K + + + Sbjct: 23 AKKEMVKAEEATVPPVTTEKPAVTPPAKPAPS-----ETVKEQPIQEAPTTTAESTVKEQ 77 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281 + + +FD S + P L K + L + + + I GH D Sbjct: 78 APTVIAATELEKVLFDFDSFVLSPAARDTLSKNAQWLEKNKQVKVQIEGHCDER---GSD 134 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 N L RA SA L+ G+ ++ + F + + + NRR + ++ Sbjct: 135 EYNLALGEKRAKSAVNYLVTLGIPASQL-SVISFGKEKPADPGHDEAAWAQNRRAEFVIL 193 Query: 340 D 340 Sbjct: 194 K 194 >gi|110639098|ref|YP_679307.1| peptidoglycan-associated lipoprotein [Cytophaga hutchinsonii ATCC 33406] gi|110281779|gb|ABG59965.1| peptidoglycan-associated lipoprotein [Cytophaga hutchinsonii ATCC 33406] Length = 673 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 8/153 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 ++ I+ T S + + + + + FD + + L Sbjct: 525 KEEFGFINKTFSVPGEKTSSQEITQNLALKKLAVGNVYVLRNIYFDFDKATLKSASNKEL 584 Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + ++L + E+ I I GHTD+ + N LS RA + L+ G+S++R+ Sbjct: 585 NNLLQLLKQNPEMEIEISGHTDS---KGSDEYNRVLSRKRAQAVVNWLVSKGISKNRLK- 640 Query: 312 ISGFAHHRLKIASD---PMNSANRRIDILVEDR 341 G+ R ++D NRR + + + Sbjct: 641 FEGYGESRPLASNDDELEGRELNRRTEFKILKK 673 >gi|333010781|gb|EGK30207.1| lateral flagellar motor protein B [Shigella flexneri K-272] gi|333021279|gb|EGK40532.1| lateral flagellar motor protein B [Shigella flexneri K-227] Length = 256 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 92/205 (44%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + S K ++ E + A+ +KK +L Sbjct: 16 AALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 75 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +S + ++ + E G+ + I D +N MF++ S+ +P +L ++ Sbjct: 76 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELA 135 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I I GHTDA +N +NW LS DRA SA +VL ++G+ ED++ ++S A Sbjct: 136 PVFDSLDNKIIITGHTDAMANKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMA 195 Query: 317 HHRLKIASDPMNSANRRIDILVEDR 341 L A +P ++ NRRI+I+V + Sbjct: 196 DQMLLDAKNPQSAGNRRIEIMVLTK 220 >gi|254454298|ref|ZP_05067735.1| OmpA family domain protein [Octadecabacter antarcticus 238] gi|198268704|gb|EDY92974.1| OmpA family domain protein [Octadecabacter antarcticus 238] Length = 219 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 10/139 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + T + +++++ +FD S+ L + + + Sbjct: 85 EAELRQQMGSNAQIVNTGSQLIVTLPQD---ILFDTGSAALSGGLRSDLNALAASMNNFP 141 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 +++ GHTD+ A N LS RA + VL++SGVS +RI I G Sbjct: 142 NSTVNVIGHTDSD---GTAAFNQDLSARRAQAVSSVLIQSGVSANRIRSI-GRGEDAPIA 197 Query: 323 ASDPMNSA--NRRIDILVE 339 ++ NRR++I + Sbjct: 198 SNLNAEGKRQNRRVEITIT 216 >gi|167741000|ref|ZP_02413774.1| hypothetical protein Bpse14_23241 [Burkholderia pseudomallei 14] Length = 433 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 74/229 (32%), Gaps = 12/229 (5%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +Q ++ + + L +S S + Sbjct: 205 EQIRQRLWTLITGARDAIQPELSLRWRGAEPGRLPLLRSVPAWASGALVFLLLFGLFAFY 264 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233 + + + L+ I+ + +L + L+++ + R Sbjct: 265 QYRLLTERNALEARILAIAKDEPAPPPQRLRLSILLKNEIARGLLTVDEDDRRSVVVFRG 324 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292 MF S L E VL K+ +A +++ GH+D P R +N LS RA Sbjct: 325 DSMFRSGESRVLSEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 384 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 Q+L++ G DRI G + + S NRR++I V Sbjct: 385 AYVAQILVQRGTPADRIRS-EGRGDAQPVAENATPAGRSRNRRVEIAVT 432 >gi|90426398|ref|YP_534768.1| OmpA/MotB [Rhodopseudomonas palustris BisB18] gi|90108412|gb|ABD90449.1| OmpA/MotB [Rhodopseudomonas palustris BisB18] Length = 464 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + P+++ +L ++ E L T I I GHTD N LS RA + Sbjct: 363 FESGRATIDPDSVGLLDRLIETALRCPTATIEIAGHTDGD---GDGAFNQTLSEKRAQAV 419 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 + ++++G+ +R + G+ +D + NRRI+ +V Sbjct: 420 AEYMVRAGLPAERFRPV-GYGSTTPVAPNDNDEGKAQNRRIEFMVR 464 >gi|332087513|gb|EGI92641.1| ompA family protein [Shigella boydii 5216-82] Length = 318 Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + + + V + + + +FD + + VL Sbjct: 167 EHIRQPVLRAIRDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 221 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + + G+TDA+ + N +LSL RA + ++++ Sbjct: 222 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 278 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + G + +D + NRR++I + R Sbjct: 279 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 310 >gi|332977451|gb|EGK14226.1| outer membrane protein [Psychrobacter sp. 1501(2011)] Length = 383 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 10/128 (7%) Query: 214 GVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269 V+ + T + + I D+ + FD S+ + + K+ E + SI Sbjct: 238 NVVVDETGCPVQVQIDDELKMELRVFFDNDKSVIKEQYKPEIAKVAEKMREYPNSSASIE 297 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328 GH + AR N RLS RA + +L GV+ +R+S + G+ + R +D Sbjct: 298 GHASKTGP--SARYNQRLSEARAIAVKTMLTNEFGVAPNRLSTV-GYGYDRPIAPNDTEE 354 Query: 329 SA--NRRI 334 NRR+ Sbjct: 355 GRAMNRRV 362 >gi|258544708|ref|ZP_05704942.1| outer membrane protein A [Cardiobacterium hominis ATCC 15826] gi|258520045|gb|EEV88904.1| outer membrane protein A [Cardiobacterium hominis ATCC 15826] Length = 201 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 9/109 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S P LQ + L + I++ GHTD+ + N +LS RA Sbjct: 83 FDFDKSNLKPAGKQALQDLAGQLNQRGANIQKITVVGHTDS---KGTDAYNQKLSERRAS 139 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L ++GV ++ + G + + NRR+++ V+ Sbjct: 140 TVANYLAENGV-PSQLIEAYGQGESHPVATNKTAEGRAQNRRVEVNVDG 187 >gi|283955082|ref|ZP_06372585.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni 414] gi|283793449|gb|EFC32215.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni 414] Length = 319 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNV---GSRAYNQKLSERRAKSV 272 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L K GV ++RI I G+ + ++D NRR+D Sbjct: 273 ANELEKYGVEKNRIKTI-GYGQDNPRSSNDTKEGRADNRRVD 313 >gi|167921374|ref|ZP_02508465.1| hypothetical protein BpseBC_22683 [Burkholderia pseudomallei BCC215] Length = 396 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 286 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 345 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 346 RATQVMQMLQSAGVPASRLEAL-GKGGVEPIGDNRTPQGRALNRRVEITVAR 396 >gi|167817630|ref|ZP_02449310.1| ompA family protein [Burkholderia pseudomallei 91] Length = 240 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 80/242 (33%), Gaps = 18/242 (7%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG--------KDL 157 + + G + L + + N + + ++ Sbjct: 2 SSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNWSANV 61 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 K + + + + + + + Q LA +++ L+ I G+ Sbjct: 62 QKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKNGLRV 119 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276 + G+L + R F+ S+ P+ +L ++ LA + I GHTD Sbjct: 120 SASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDN-- 176 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 N LS RA + L+ G++ +++ +G + +D + NRRI Sbjct: 177 -SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRARNRRI 234 Query: 335 DI 336 + Sbjct: 235 EF 236 >gi|299145102|ref|ZP_07038170.1| putative flagellar motor protein MotB [Bacteroides sp. 3_1_23] gi|298515593|gb|EFI39474.1| putative flagellar motor protein MotB [Bacteroides sp. 3_1_23] Length = 280 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 85/217 (39%), Gaps = 20/217 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195 Q +L RD+ K + + ++N E L L +K + ++R + +L Sbjct: 49 GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 108 Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 I + + + + + +++ D+ +F S+ Sbjct: 109 QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 165 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302 L K+ EVL T++ I GHTD P +DNW LS+ RA S ++L+K+ Sbjct: 166 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 225 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 V+ +I + SG + + NRR +I+ Sbjct: 226 NVNPLQI-QPSGRGEYMPVDDNKTAEGRSKNRRTEII 261 >gi|261210344|ref|ZP_05924639.1| outer membrane protein A precursor [Vibrio sp. RC341] gi|260840571|gb|EEX67132.1| outer membrane protein A precursor [Vibrio sp. RC341] Length = 293 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 7/111 (6%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 + + +F +SS + + + + S +++ GH+D+ N Sbjct: 183 VVRQEFVGEKLFAFNSSELKASSSLDMMMDALMANESLS-LTLEGHSDSV---GSEEYNQ 238 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334 LS RA + + + +G+ RI + G ++D + NRR+ Sbjct: 239 ALSERRAQAVAEYFILNGIDASRI-TVMGKGSQEPVASNDSDIGRAQNRRV 288 >gi|254292013|ref|ZP_04962792.1| lipoprotein, putative [Vibrio cholerae AM-19226] gi|150422090|gb|EDN14058.1| lipoprotein, putative [Vibrio cholerae AM-19226] Length = 223 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 12/146 (8%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + D+ V+ V + + + N F +S L+ + Sbjct: 84 DQQEAELRKALMDSGVQVVRVGENQLMLRME-----NGIGFTSNSYQLDSYIHKTLRGVA 138 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + + GHTD++ N LS RA S L+ GV+E R G Sbjct: 139 RILVEYPDTSLVIEGHTDST---GSDSTNQVLSEKRAESVRSFLLSQGVAEGRAIA-RGN 194 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 +++ NRR++I + Sbjct: 195 GERFPLCSNNTAEGRACNRRVEIQIL 220 >gi|90019934|ref|YP_525761.1| hypothetical protein Sde_0285 [Saccharophagus degradans 2-40] gi|89949534|gb|ABD79549.1| OmpA/MotB [Saccharophagus degradans 2-40] Length = 364 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S PE+ L ++ +L I I GHTD ++ N +LS RA S Sbjct: 199 FDSGKSALKPESDSELAELATILNEHPALKIKIVGHTDNV---GDSKANLKLSAARAKSV 255 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 L+K+ V+ +S G + + + NRR++I+ Sbjct: 256 LNALVKNFNVNAANLSA-EGQGETQPVDTNSTDMGRAKNRRVEII 299 >gi|159186121|ref|NP_356322.2| OmpA-like porin [Agrobacterium tumefaciens str. C58] gi|159141255|gb|AAK89107.2| OmpA-like porin [Agrobacterium tumefaciens str. C58] Length = 501 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 65/184 (35%), Gaps = 8/184 (4%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 T+ + P + + K ++ ++ L + K V Sbjct: 293 PPTETPSVLISNPPPHPPAQVEIPRVVEPPKTVAPRQPSRLEKLMAFLQPEVDKKLVTLA 352 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 + + I N+ +F S+ P+ ++Q+IG LA + G+TD P + Sbjct: 353 DVNGRLRVRIN---NSGLFTTGSADVSPQFRDLIQRIGGALAAEKFRAVVIGYTDTVPIK 409 Query: 279 NIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 + NW LS RA + +L + + ++ G A + NRR + Sbjct: 410 TVEFPSNWHLSEARAKAVGDILSQFTGPDAILT--EGRADSDPIADNKTEEGRQINRRTE 467 Query: 336 ILVE 339 I+V Sbjct: 468 IMVL 471 >gi|33595602|ref|NP_883245.1| hypothetical protein BPP0920 [Bordetella parapertussis 12822] gi|33600116|ref|NP_887676.1| hypothetical protein BB1130 [Bordetella bronchiseptica RB50] gi|33565680|emb|CAE40328.1| probable outer membrane protein [Bordetella parapertussis] gi|33567714|emb|CAE31628.1| probable outer membrane protein [Bordetella bronchiseptica RB50] Length = 215 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS +++++ + + L+ +A R ++ I + Sbjct: 43 ELSTRLEAEVEQRQAETQRREALEQALAAPLAAG----------RVTLVDGRIGISGNVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S PE +L + L E++ + G TD DNW LS Sbjct: 93 FALNSDQLQPEGREILASLVAPLSAYLRAHDEILMVSGFTDDQQVHQGNRRYADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +G+ + + F + ++ + + NRR++I Sbjct: 153 QRALTVTRALIDAGIPAASVFAAA-FGAEQPVASNADETGRAQNRRVEI 200 >gi|293605866|ref|ZP_06688236.1| OmpA family protein [Achromobacter piechaudii ATCC 43553] gi|292815653|gb|EFF74764.1| OmpA family protein [Achromobacter piechaudii ATCC 43553] Length = 216 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 20/170 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS +K+++ + + L+G +A R ++ I + + Sbjct: 43 QLSTRLEEEVKQRQEETQRRETLEQALAGPLAAG----------RVTLINGRIGISGSVL 92 Query: 237 FDKSSSIPLPETIVVLQKIGE----VLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S PE +L+ + E L E++ + G+TD R DNW LS Sbjct: 93 FALNSDQLQPEGREILKTLIEPLAAYLKTHDEILMVSGYTDDQQVREGNRRFADNWDLSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 RA + + L+ GV + + F + ++ + + NRR++I Sbjct: 153 QRALTVTRALIDEGVPSATVFAAA-FGSEQPVASNADEEGRAKNRRVEIT 201 >gi|170723577|ref|YP_001751265.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619] gi|169761580|gb|ACA74896.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 240 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 10/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A GV + I + + F S+ P L + Sbjct: 88 DKQEAELRAQMANTGVEVQRQGDQIKLIM---PGNITFATDSANIAPSFYSPLNNLATSF 144 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I + G TD++ + N LS RA + L GV R+ + G Sbjct: 145 KQFNQNTIEVVGFTDST---GSRQHNMDLSQRRAQAVSAYLTSQGVDASRV-SVRGMGPD 200 Query: 319 RLKIASDPM--NSANRRIDILVE 339 + ++ + NRR+++ ++ Sbjct: 201 QPIASNADANGRAQNRRVEVNLK 223 >gi|114562313|ref|YP_749826.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114333606|gb|ABI70988.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400] Length = 225 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N F ++ VL + Sbjct: 84 YMDVQEAELRKQLKSTGVSVTRNGDNIVLNM---PNEVTFAVDQTVLSSRAKSVLNSVVL 140 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V + ++ G+TD+ N RLS RA Q + VS R+S +G Sbjct: 141 VAKEYDDTRLNVIGYTDS---SGSDSYNLRLSQVRASEVAQYMTSQKVSGSRVSS-TGMG 196 Query: 317 HHRLKIASDPM--NSANRRIDILVE 339 ++ S NRR++I++ Sbjct: 197 ESSPIASNSTEQGRSQNRRVEIVLT 221 >gi|60650175|ref|YP_209728.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343] gi|255010962|ref|ZP_05283088.1| putative outer membrane protein [Bacteroides fragilis 3_1_12] gi|313148766|ref|ZP_07810959.1| lipoprotein [Bacteroides fragilis 3_1_12] gi|317477470|ref|ZP_07936697.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA] gi|60495255|emb|CAH05749.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343] gi|313137533|gb|EFR54893.1| lipoprotein [Bacteroides fragilis 3_1_12] gi|316906390|gb|EFV28117.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA] Length = 213 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 19/195 (9%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + +++ + + L ++K + K + R L ++S N Sbjct: 34 DKEKDMIENNSNYSTASIVGGSAKLVKEERDKAIQEKIEARRNKLKAIDGLSISSYKDKN 93 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269 + ++ +F S E +L + ++ I I Sbjct: 94 GKEQFKAT------------AQSEILFKFDSYELNEEAQKMLSDLCNIITEIPNTKIKII 141 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 GHTD + N LS +RA + L +G+ + I++ G + + Sbjct: 142 GHTDNI---GEKQYNIILSKNRAAAVGNYLRTAGIETNNITE-DGKGYSEPIADNTSEAG 197 Query: 328 NSANRRIDILVEDRQ 342 + NRR++I + + + Sbjct: 198 RAKNRRVEIFITNDE 212 >gi|237707828|ref|ZP_04538309.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229458156|gb|EEO63877.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 213 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 19/195 (9%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + +++ + + L ++K + K + R L ++S N Sbjct: 34 DKEKDMIENNSNYSTASIVGGSAKLVKEERDKAIQEKIEARRNKLKAIDGLSISSYKDKN 93 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269 + ++ +F S E +L + ++ I I Sbjct: 94 GKEQFKAT------------AQSEILFKFDSYELNEEAQKMLSDLCNIITEIPNTKIKII 141 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-- 327 GHTD + N LS +RA + L +G+ + I++ G + + Sbjct: 142 GHTDNI---GEKQYNIILSKNRAAAVGNYLRTAGIETNNITE-DGKGYSEPIADNTSEAG 197 Query: 328 NSANRRIDILVEDRQ 342 + NRR++I + + + Sbjct: 198 RAKNRRVEIFITNDE 212 >gi|91215766|ref|ZP_01252736.1| OmpA family protein [Psychroflexus torquis ATCC 700755] gi|91186232|gb|EAS72605.1| OmpA family protein [Psychroflexus torquis ATCC 700755] Length = 231 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 8/142 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + G GI ++ D+ + F + S ++ + L K+ + Sbjct: 84 QAKEIEEEIPGAEVTRVGEGINVTF-DENSGVYFTTNKSNIEGKSEISLLKLIGIFQKYP 142 Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I + GHTD++ N LS RA S L +G+S RI + + + K Sbjct: 143 KTNIIVEGHTDST---GSDSYNMDLSKRRAQSVTDYLSNNGISSSRIKT-NWYGEEQPKF 198 Query: 323 ASDP--MNSANRRIDILVEDRQ 342 + S NRR+++ + + Sbjct: 199 DNTSPEERSKNRRVELAIVANE 220 >gi|331684442|ref|ZP_08385034.1| putative OmpA-family membrane protein [Escherichia coli H299] gi|331078057|gb|EGI49263.1| putative OmpA-family membrane protein [Escherichia coli H299] Length = 550 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 6/121 (4%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIAR 282 + + + +FD + + VL + + + G+TDA+ + Sbjct: 425 LQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEK 481 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 N +LSL RA + ++++ + G + +D + NRR++I + Sbjct: 482 SNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVP 541 Query: 341 R 341 R Sbjct: 542 R 542 >gi|167826566|ref|ZP_02458037.1| OmpA family membrane protein [Burkholderia pseudomallei 9] Length = 531 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 356 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 415 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 416 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 472 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 473 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 519 >gi|167722027|ref|ZP_02405263.1| OmpA family membrane protein [Burkholderia pseudomallei DM98] Length = 531 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 356 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 415 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 416 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 472 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 473 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 519 >gi|49187402|ref|YP_030654.1| chemotaxis protein motB, C-terminus [Bacillus anthracis str. Sterne] gi|227817292|ref|YP_002817301.1| chemotaxis protein MotB [Bacillus anthracis str. CDC 684] gi|254736614|ref|ZP_05194320.1| chemotaxis protein MotB [Bacillus anthracis str. Western North America USA6153] gi|254741652|ref|ZP_05199339.1| chemotaxis protein MotB [Bacillus anthracis str. Kruger B] gi|49181329|gb|AAT56705.1| chemotaxis protein motB, C-terminus [Bacillus anthracis str. Sterne] gi|227002900|gb|ACP12643.1| chemotaxis protein MotB [Bacillus anthracis str. CDC 684] Length = 156 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 75/156 (48%), Gaps = 12/156 (7%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 L+ L KKI ++ + + T G++++I++ +FD + E+ Sbjct: 1 MDELKALQKKIDQYINE---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLES 54 Query: 249 IVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VS 305 + + +++ +L + S I++ GHTD P N NW LS RA + QVL+++ + Sbjct: 55 LGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQ 114 Query: 306 EDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 ++ S I G+ +R +D + NRR+++ + Sbjct: 115 PEKFSAI-GYGEYRSIAPNDTQEGKAKNRRVEVFIL 149 >gi|209809406|ref|YP_002264944.1| putative outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] gi|208010968|emb|CAQ81375.1| putative outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] Length = 185 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 13/167 (7%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 S+++ A+K ++ L+ ++ D+I +L Sbjct: 19 QSTSEDETTAIKSTPTIESFITYHHDELNAIITDDIGSVAQVNDEIIVLL------NGDT 72 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD S + E+ L ++ ++L + I GHTD+ + N LS RA S Sbjct: 73 SFDSGSIVIKSESKDALTQLAQLLNNKPRSEVFIAGHTDS---SGSKQFNTSLSNKRANS 129 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 +L + GV +RI+ GF + + NRRI+I + Sbjct: 130 VLALLEQKGVDANRINTY-GFGEAEPIASNMNANGRKKNRRIEIRIT 175 >gi|71281842|ref|YP_271675.1| ompA family protein [Colwellia psychrerythraea 34H] gi|71147582|gb|AAZ28055.1| ompA family protein [Colwellia psychrerythraea 34H] Length = 222 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 55/145 (37%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + S + L GV + I + + F SSS VL + Sbjct: 80 YMDSQEAKLRKQLRDSGVSIQREGDKINLIM---PGNITFATSSSNINTNFTGVLNSVAL 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + + + GHTD+ A+ N +LS +RA S L + +R+ ++ GF Sbjct: 137 VLEEYNKTLVVVSGHTDS---SGSAQYNQKLSEERAGSVANYLRGQKILSERL-EVVGFG 192 Query: 317 HHRLKIASDPMNSA--NRRIDILVE 339 + + NRR++I + Sbjct: 193 EAQPVADNQSAGGRELNRRVEITLL 217 >gi|325473514|gb|EGC76707.1| OmpA family protein [Treponema denticola F0402] Length = 422 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 10/160 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 A + ++ + + V D ++ E T G+ ISI F +S+I Sbjct: 270 ARAKVIEVKKIDTAAEEEIKKSVEDLNLENTTIEKTDEGLTISI----ENIQFLPNSAIL 325 Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 L+KIGE+L + I GHT + +LS +RA + L+ G Sbjct: 326 RESEKEKLKKIGEILLKFPDREFLISGHT---ALAGTEEERQKLSEERAAAVANYLIDLG 382 Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 V + GF R A++ + NRR++I + D+ Sbjct: 383 VQKREHVYTRGFGARRPVAANNSPENMAKNRRVEITILDK 422 >gi|325300740|ref|YP_004260656.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324320293|gb|ADY38183.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170] Length = 209 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 18/160 (11%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-----------RNTPMFDKSSSIP 244 A+ I + +++ G++++ ID+ +N +F S Sbjct: 53 AELIKKEQEKAINKKLLERENKLKNIPGLVVTTIDETNGKKIFKATMQNEILFKFDSHEL 112 Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 +L ++ ++ I + GHTD + N LS +RA + L +G Sbjct: 113 NKNAKSILDEMIGIINEIPNTKIKVIGHTDNIGEKG---YNILLSQNRAAAVGNYLRNAG 169 Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 + I++ G ++ + NRR++I + + Sbjct: 170 IETKNITE-EGKGFDEPVSSNKTEAGRAKNRRVEIFLSND 208 >gi|311106822|ref|YP_003979675.1| OmpA family protein 2 [Achromobacter xylosoxidans A8] gi|310761511|gb|ADP16960.1| OmpA family protein 2 [Achromobacter xylosoxidans A8] Length = 216 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 20/173 (11%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 LS + +K+++ + + L+G +A R ++ I Sbjct: 39 AVQLQLSTQLEEEVKQRQVETQRRETLEQALAGPLAAG----------RVTLIDGRIGIS 88 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGE----VLAHSTEVISIRGHTDASPFRN---IARDNW 285 + +F +S PE VL+ + E L E++ + G+TD R DNW Sbjct: 89 GSVLFALNSDQLQPEGREVLKSLIEPLSAYLKSHNEILMVSGYTDDQQVREGNRRFADNW 148 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 LS RA + + L+ GV + + F + A+ + + NRR++I Sbjct: 149 DLSAQRALTVTRALIDEGVPSSAVFAAA-FGSEQPVAANTDEEGRAKNRRVEI 200 >gi|260890076|ref|ZP_05901339.1| hypothetical protein GCWU000323_01238 [Leptotrichia hofstadii F0254] gi|260860099|gb|EEX74599.1| OmpA family protein [Leptotrichia hofstadii F0254] Length = 155 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 5/108 (4%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 FD S+ P+ +L+ + + + + + I GHTD+ + N L + Sbjct: 46 DSGRLNFDFDKSVVKPQYFELLRNVKDYVEQNNLNLRIIGHTDS---KGTDAYNMALGMR 102 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 RA + L++ G+ RI + +D NRRI Sbjct: 103 RANAVKAKLLEFGLDPARIIGVESMGESDPIAPNDTEQGRFENRRIQF 150 >gi|119776228|ref|YP_928968.1| OmpA family protein [Shewanella amazonensis SB2B] gi|119768728|gb|ABM01299.1| OmpA family protein [Shewanella amazonensis SB2B] Length = 222 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ + F + P + VL + Sbjct: 82 YMDVQETKLRQQLQASGVSVTRNGDNIILNMPNDVT---FAVDKTDLSPRAMQVLDSVAL 138 Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V +++ G+TD+ N RLS RA L+ GV+ R+S G Sbjct: 139 VAKEYSKTRLNVLGYTDS---SGADSYNLRLSQVRASEVGNYLLSKGVAAARVST-QGMG 194 Query: 317 HHRLKIASDPM--NSANRRIDILVE 339 ++ + NRR++I++ Sbjct: 195 EASPIASNATAEGRAQNRRVEIILT 219 >gi|167921266|ref|ZP_02508357.1| OmpA family protein [Burkholderia pseudomallei BCC215] Length = 524 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMF 237 + RL+ I TL V G+ L +++D T +F Sbjct: 349 AQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRTASIAMQLDTVSLF 408 Query: 238 DKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 409 AAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAI 465 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 466 RDWFVDQGVLKTRFI-VQGAGDTHPIADNDSPSGRAQNRRVEVLLIPD 512 >gi|24376330|ref|NP_720438.1| outer membrane protein A [Shewanella oneidensis MR-1] gi|24345232|gb|AAN53038.1| outer membrane protein OmpA [Shewanella oneidensis MR-1] Length = 342 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 9/126 (7%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDA 274 + + + + N+ +F +SS+ + + L ++ GHTD+ Sbjct: 213 VVQIVEKRQFVYSEQKGNSLLFAHNSSVLNNTSQF--ADVVSFLKQHPTASAVITGHTDS 270 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 + + N LS RA S L+ GV +++ + G + + NR Sbjct: 271 T---GSDKYNQWLSERRAISVANYLVSQGVQSAQLTSV-GKGETASVADNTTENGRAMNR 326 Query: 333 RIDILV 338 R++I + Sbjct: 327 RVEITI 332 >gi|296328018|ref|ZP_06870553.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154974|gb|EFG95756.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 182 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 10/131 (7%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 +GV +++S+ +FD L + + L + + I I G+ Sbjct: 58 EGVTIRREGNNLILSM---PELILFDFDKYAVKDGIKPSLSTLAKALGENKDIHIKIDGY 114 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329 TD F N LS+ RA + L+ G I I G+ + S Sbjct: 115 TD---FIGTEAYNLDLSVKRARAIKDFLISKGAIGSNI-SIEGYGEQNPADTNQTAAGRS 170 Query: 330 ANRRIDILVED 340 NRR++ ++ Sbjct: 171 RNRRVEFIISR 181 >gi|218259786|ref|ZP_03475375.1| hypothetical protein PRABACTJOHN_01034 [Parabacteroides johnsonii DSM 18315] gi|218224914|gb|EEC97564.1| hypothetical protein PRABACTJOHN_01034 [Parabacteroides johnsonii DSM 18315] Length = 227 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 17/154 (11%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 K++ K++ +TL V + ++ + +F +SS + Sbjct: 72 KKMDKQKKELEATLPEETT------VETINNGEALKVTF---DSGILFATNSSTVSAASK 122 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSED 307 L+ + L + + I I GHTD + N LS RA S + LM+ GVS Sbjct: 123 SALRDLAASLNANPDTDIKIIGHTDNT---GKVDYNQTLSEKRAKSVFDYLMEDQGVSSK 179 Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 R+ G H + + NRR++IL+ Sbjct: 180 RM-TYEGKGVHEPVADNSTPEGRALNRRVEILIL 212 >gi|153215326|ref|ZP_01949939.1| lipoprotein, putative [Vibrio cholerae 1587] gi|153826671|ref|ZP_01979338.1| lipoprotein, putative [Vibrio cholerae MZO-2] gi|153829618|ref|ZP_01982285.1| putative lipoprotein [Vibrio cholerae 623-39] gi|183179599|ref|ZP_02957810.1| lipoprotein, putative [Vibrio cholerae MZO-3] gi|229515575|ref|ZP_04405034.1| outer membrane protein [Vibrio cholerae TMA 21] gi|229520377|ref|ZP_04409802.1| outer membrane protein [Vibrio cholerae TM 11079-80] gi|229525804|ref|ZP_04415209.1| outer membrane protein [Vibrio cholerae bv. albensis VL426] gi|229529718|ref|ZP_04419108.1| outer membrane protein [Vibrio cholerae 12129(1)] gi|254226715|ref|ZP_04920292.1| lipoprotein, putative [Vibrio cholerae V51] gi|262191649|ref|ZP_06049827.1| outer membrane protein [Vibrio cholerae CT 5369-93] gi|297578794|ref|ZP_06940722.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|124114769|gb|EAY33589.1| lipoprotein, putative [Vibrio cholerae 1587] gi|125620776|gb|EAZ49133.1| lipoprotein, putative [Vibrio cholerae V51] gi|148874894|gb|EDL73029.1| putative lipoprotein [Vibrio cholerae 623-39] gi|149739533|gb|EDM53761.1| lipoprotein, putative [Vibrio cholerae MZO-2] gi|183013010|gb|EDT88310.1| lipoprotein, putative [Vibrio cholerae MZO-3] gi|229333492|gb|EEN98978.1| outer membrane protein [Vibrio cholerae 12129(1)] gi|229339385|gb|EEO04402.1| outer membrane protein [Vibrio cholerae bv. albensis VL426] gi|229342475|gb|EEO07468.1| outer membrane protein [Vibrio cholerae TM 11079-80] gi|229347344|gb|EEO12304.1| outer membrane protein [Vibrio cholerae TMA 21] gi|262032491|gb|EEY51051.1| outer membrane protein [Vibrio cholerae CT 5369-93] gi|297536388|gb|EFH75221.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|327483893|gb|AEA78300.1| Outer membrane protein [Vibrio cholerae LMA3894-4] Length = 223 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 12/146 (8%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + D+ V+ V + + + N F +S L+ + Sbjct: 84 DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSNSYQLDSYIHKTLRGVA 138 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + + GHTD++ N LS RA S L+ GV+ R G Sbjct: 139 RILVEYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRSFLLSQGVAAGRAIA-RGN 194 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 +++ NRR++I + Sbjct: 195 GERFPLCSNNTAEGRACNRRVEIQIL 220 >gi|323159967|gb|EFZ45936.1| ompA family protein [Escherichia coli E128010] Length = 250 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 11/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + + + V + + + +FD + + VL Sbjct: 99 EQIRQPVLRAIRDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 153 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + + G+TDA+ + N +LSL RA + ++++ Sbjct: 154 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 210 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + G + +D + NRR++I + R Sbjct: 211 VQGLGESQPAATNDTPQGRAVNRRVEISLVPR 242 >gi|260889292|ref|ZP_05900555.1| outer membrane protein, porin F [Leptotrichia hofstadii F0254] gi|260860703|gb|EEX75203.1| outer membrane protein, porin F [Leptotrichia hofstadii F0254] Length = 269 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 88/249 (35%), Gaps = 8/249 (3%) Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 S+ + + I + +V T + N ++ + + +LT+D Sbjct: 18 PTVSEKMTTSDMRKDIIRANVADIQQDTANEVPTLDTPNPQKPVATADNPDLITVALTQD 77 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK-KRLQDLAKKISSTLSGLVAD 209 + + + + + L + + + + ++ + + Sbjct: 78 GTGTRIVNNRSSGTYQTSGKNAVNLSQQKTQAVQNNQPVTAASAQSEAEQTTATVSEIQE 137 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 + +I++ F K+S+ E VL+ I + + + ++SI Sbjct: 138 KPINNPQKVQISKSEIITLRSNDLN--FQKNSTDLKKEAYPVLRDIKDYIEKNDFLVSII 195 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 G+TD S + N RLSL RA L++ G+S+DR+ + G +D Sbjct: 196 GYTDKSGVSS---YNKRLSLRRAEKVSLKLIELGLSKDRVVDLIGRGESNPIKTNDTEEG 252 Query: 330 A--NRRIDI 336 NRR++ Sbjct: 253 REGNRRVEF 261 >gi|119385179|ref|YP_916235.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans PD1222] gi|119374946|gb|ABL70539.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222] Length = 463 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 8/131 (6%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDAS 275 +G+++ ++ + +F + + P +++ IG + AH +++ GHTD Sbjct: 334 RETSGLVVLVVRASDPEVFRSAKASLNPAYQPLVEAIGRTVVANAHRIGAVAVSGHTDNV 393 Query: 276 PF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331 P N N LS RA + Q L +GV + + G A + + + N Sbjct: 394 PVQRSNPFASNQGLSEARAETVAQALAAAGVPAE-LISAEGRADSQPVGDNATRDGRAQN 452 Query: 332 RRIDILVEDRQ 342 RRI+I +E RQ Sbjct: 453 RRIEIRIEKRQ 463 >gi|319786952|ref|YP_004146427.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1] gi|317465464|gb|ADV27196.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1] Length = 216 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 10/161 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 ++ RL + ++ + A V R ++ I R +F +S Sbjct: 41 QLQLSARLDEEVRQRQAEAKQRHALEQALAVPLADGRVTLVDGRIGIRGNVLFALNSDQL 100 Query: 245 LPETIVVLQKIGEVLAHS----TEVISIRGHTDASPF---RNIARDNWRLSLDRAYSAYQ 297 PE VL+ + LA +V+ + G TD P DNW LS RA + + Sbjct: 101 QPEGRQVLRSLAAPLARYLEAGEQVLMVSGFTDDRPVHEGNRRFADNWELSAQRALTVTR 160 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336 L++ GV D + + F + +D + NRR++I Sbjct: 161 ALIEEGVPADSVFAAA-FGAQQPVSPNDDEEGRARNRRVEI 200 >gi|163742880|ref|ZP_02150264.1| hypothetical protein RG210_12200 [Phaeobacter gallaeciensis 2.10] gi|161383844|gb|EDQ08229.1| hypothetical protein RG210_12200 [Phaeobacter gallaeciensis 2.10] Length = 655 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 97/308 (31%), Gaps = 17/308 (5%) Query: 50 VMWIINATDDDTKKAIEQY-FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 ++ ++ + A ++ +T + E ++ + L + Sbjct: 349 LLEALSKLEQANAAAADREVLQQRLLAALTEGEERAVEAAELASLAEQRAALLAQARASL 408 Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 ++ ++ + + RD+ + + + Sbjct: 409 STEQAVSEEAQRQTALLNQQVAALREQLGGLQTLLDDYKARDAAQSVQMQNLGQDLNAAL 468 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + KR + + + L ++ + + G+ I Sbjct: 469 ARAAAEERRRRLLEESERKRLEAEAEQLSSKAQDLEQYRSEFFGRLRDVLGNQEGVRIEG 528 Query: 229 IDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASP-- 276 + +F S+ P + K+ +L +I + GHTD +P Sbjct: 529 DRFVFASEVLFSPGSADLSPAGRAEIGKVAGILQAVAAAIPPEINWIIRVDGHTDDTPLG 588 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRR 333 DNW LS RA S + ++++ G+ +R+S +GF ++ + + NRR Sbjct: 589 IHPKFADNWELSQGRALSVVRYMVQALGIPPERLSA-NGFGEYQPVNPAPTAVARAQNRR 647 Query: 334 IDILVEDR 341 I++ +R Sbjct: 648 IELKFTER 655 >gi|153877096|ref|ZP_02004079.1| OmpA domain protein [Beggiatoa sp. PS] gi|152066440|gb|EDN65921.1| OmpA domain protein [Beggiatoa sp. PS] Length = 155 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 12/117 (10%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAY 293 +FD + S+ E +Q++ + +A I+GHTD+ N LS RA Sbjct: 42 VLFDTNKSMVKSEYYAEIQQVSDFMAKYPSTSTEIQGHTDS---SGSDDYNLNLSQQRAD 98 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRI----DILVEDRQG 343 + +VL+ +S R++ + G+ + + NRR+ + +V+ +G Sbjct: 99 AVLEVLISQFNISPSRLAAV-GYGESQPIADNSTREGRQQNRRVVARIETVVKQIEG 154 >gi|90416365|ref|ZP_01224297.1| OmpA domain protein [marine gamma proteobacterium HTCC2207] gi|90332090|gb|EAS47304.1| OmpA domain protein [marine gamma proteobacterium HTCC2207] Length = 324 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 8/102 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + L L I + ++ + GHTD+ + N LS RA + Sbjct: 215 FEFNKDTVLAVYGDQLDAIAAAMKAQDDIDLVLEGHTDSR---GADQYNMSLSDRRAKAV 271 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334 L++ G+ RIS + G+ + ++ + NRR+ Sbjct: 272 KAKLVEDYGIPAARISAV-GYGETQPIATNETDEGRARNRRV 312 >gi|148262285|ref|YP_001228991.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4] gi|146395785|gb|ABQ24418.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4] Length = 194 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 46/174 (26%), Gaps = 7/174 (4%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 K+E K + + Sbjct: 23 AKKEMVKGEEGVVPSAATEKPAVTPPAKPSMTEEVVKEQPIKEATTIAEASIKEQPVTAV 82 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWR 286 + FD S + + +L + L + I GH D N Sbjct: 83 AATELGKVYFDFDSFVLTQTSRDILSNNAKWLLKTGRAKVQIEGHCDER---GSDEYNLA 139 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338 L RA SA L+ GV D++ + + + ++ + NRR + ++ Sbjct: 140 LGEKRAKSAMNYLVTLGVPADQL-SVISYGKEKPADPGHNEAAWAKNRRAEFVI 192 >gi|254182815|ref|ZP_04889408.1| OmpA domain protein [Burkholderia pseudomallei 1655] gi|184213349|gb|EDU10392.1| OmpA domain protein [Burkholderia pseudomallei 1655] Length = 421 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 311 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 370 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA Q+L +GV R+ + G + + NRR++I V Sbjct: 371 RATQVMQMLQSAGVPASRLEAL-GKGGAAPIGDNRTPQGRALNRRVEITVAR 421 >gi|332703401|ref|ZP_08423489.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332553550|gb|EGJ50594.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 249 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 9/173 (5%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 + +++ +++ K + + V + I + + Sbjct: 80 DEQAVLIDQVKLQRQIMENQRKLFTEVQFYQNTKGLKGVVGAHFDKGIITLRVPSD---V 136 Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRN--IARDNWRLSLDRA 292 MF + + VL+ + ++L H+ + I+IRG TD +DNW +S R+ Sbjct: 137 MFAPGQVELTTQGVAVLRDLKDLLIKHADQRINIRGFTDDVRPSGNSRFKDNWEISAMRS 196 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 + +VLM G+ R++ +G A ++ + NRRI+I +E R G Sbjct: 197 VNVLRVLMSLGMEPTRLTA-TGLADLEPLFPNNSTENRARNRRIEITLEKRVG 248 >gi|126725798|ref|ZP_01741640.1| hypothetical protein RB2150_06318 [Rhodobacterales bacterium HTCC2150] gi|126705002|gb|EBA04093.1| hypothetical protein RB2150_06318 [Rhodobacterales bacterium HTCC2150] Length = 1017 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 79/206 (38%), Gaps = 15/206 (7%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVA 208 D D + T + + L S++K +A ++ L ++ S Sbjct: 813 DIANETDAAQGTQITVLTEELNTALLRTASEQKKIAKLEAAEVKRLEEEAKKLESFKSDF 872 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS------ 262 ++ VL I+ + +F + P + K+ ++L Sbjct: 873 FGQLRQVLAGREGVKIVGDRFVFSSEVLFPPGGAELSPAGEAEVAKVADILQDVIDKIPA 932 Query: 263 --TEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317 VI + GHTD F +NW LS RA S Q ++ S G+ DR+S +GF Sbjct: 933 NIDWVIRVDGHTDNVAFNGLGKYSNNWELSQGRALSVVQFMVSSFGLPPDRLSA-NGFGE 991 Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341 ++ +D + NRRI++ + ++ Sbjct: 992 YQPINLADTPEARAQNRRIELKLTEK 1017 >gi|114800290|ref|YP_762003.1| OmpA family protein [Hyphomonas neptunium ATCC 15444] gi|114740464|gb|ABI78589.1| OmpA family protein [Hyphomonas neptunium ATCC 15444] Length = 211 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L G+ E I +++ + F + S+ P L + Sbjct: 70 YMDRQEEKLRQQTAGTGIEVERQGDQIALTM---PSGISFQQGSAQIQPAFYQTLNDVAA 126 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + IRGH + N RLS RA + L GV R+S + G Sbjct: 127 TLNEYPSTAVDIRGHASSE---GARDFNQRLSQQRADAVRSYLTNQGVQGVRMSAV-GMG 182 Query: 317 HHRLKIASDPMNSA--NRRIDILVE 339 + NRR++I++ Sbjct: 183 IDYPVADNSTEAGRSQNRRVEIILT 207 >gi|158522220|ref|YP_001530090.1| peptidoglycan-associated lipoprotein [Desulfococcus oleovorans Hxd3] gi|158511046|gb|ABW68013.1| Peptidoglycan-associated lipoprotein [Desulfococcus oleovorans Hxd3] Length = 181 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S P +L+ L +++ + + GH D N L RA +A Sbjct: 80 FDFDKSTLTPAAREILRTKATWLRDNSDAAVVVEGHCDER---GTTEYNLALGDRRAKAA 136 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 L+ G+S R+S IS + R ++ + NRR ++ Sbjct: 137 KDFLVDMGISASRLSTIS-YGEERPLDPRSNETAWAKNRRAQFVLR 181 >gi|326800681|ref|YP_004318500.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] gi|326551445|gb|ADZ79830.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] Length = 650 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 N F + LP + L ++ ++L H+ + I GHTD + A+ N LS R Sbjct: 539 NNIFFPTNGYELLPTSESDLMELFQLLQHNKHIRIEITGHTDNT---GSAQANQVLSEKR 595 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + Y L+ G+ + R+ G+ + + NRR + + Sbjct: 596 ALAVYAYLLSKGIDKTRL-AYKGYGQNNPIADNTTEKGKQQNRRTEFKI 643 >gi|312130324|ref|YP_003997664.1| v-type h(+)-translocating pyrophosphatase [Leadbetterella byssophila DSM 17132] gi|311906870|gb|ADQ17311.1| V-type H(+)-translocating pyrophosphatase [Leadbetterella byssophila DSM 17132] Length = 878 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + S+ ++ ++ I +L + I + G+TD + N +LS +RA + Sbjct: 775 FKRGSNDIDESSMEEVKNIAAILKEYPQVKIKVGGYTDNT---GTPEGNLKLSEERATNV 831 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + L+ G+SEDR+S GF + NRRI I V ++ Sbjct: 832 KKALIALGISEDRLSS-EGFGQEHPVADNTTEEGRQKNRRIAISVREK 878 >gi|188575566|ref|YP_001912495.1| OmpA family domain protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520018|gb|ACD57963.1| OmpA family domain protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 268 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 77/233 (33%), Gaps = 8/233 (3%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + G + R+ NN+ S + + S + + + + Sbjct: 41 RPVIVEGVVPDQATKARILNNLRDTYGSARIVDRVQVESIPSPPNWGEYVAKMVSPGLKR 100 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 L + ++ + Q +L+ + + + + G+L + Sbjct: 101 VAAGKLEVNGQAVRISGQVVNEAQRQQVASDLSLASNTSYTVTNSLKLGGSEQGVLDQTL 160 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 R F SS P + +L ++ E ++ + I GHTD N LS Sbjct: 161 GNRIIE-FQSGSSRLTPLGMRILDEMVEKMSQMKDARFLIIGHTDNV---GQRESNLALS 216 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 RA + +++ G+ R++ + G + + + NRRI ++ Sbjct: 217 QARAQAVKDYIVQKGIDGARMN-VQGKGPDQPVADNASPDGRARNRRIQFKIQ 268 >gi|126727783|ref|ZP_01743613.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150] gi|126702910|gb|EBA02013.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150] Length = 630 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 36/320 (11%), Positives = 87/320 (27%), Gaps = 32/320 (10%) Query: 35 IVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSS 94 I Y+D + + ++ T + + + + + S Sbjct: 300 ITYSDAD-------VSLVALDTTPEADFDRVVGELKAALPEVFSLDAVLPKVVVLDGTGS 352 Query: 95 QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154 + + V L+ ++++Q + Sbjct: 353 DPALIEFFATKSPEGQVQLRGRLADERQQSTVTSFAQARFGADAVYSATRLDTDLPDGWA 412 Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 + + + P + +K + ++ + ++ L + + Sbjct: 413 LRVLAGVEAMSMLTHGVLIVQPEF-----VELKGESHVETVNDDVARLLGEKLGEGQNYR 467 Query: 215 VLFETTRTGI-------------LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + + IS F ++ ++ + K+ E Sbjct: 468 LNITYVEPPLPEDAPKSPEVCITNISTALASRKIAFAPGAADIEATSLSTIDKLTEAFQG 527 Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 +EV + I GHTD+ N LS RA + L+ GV ++ G+ Sbjct: 528 CSEVAMEIGGHTDSQ---GRETMNLNLSQQRADAVLNGLLARGVLTSNLTA-KGYGETVP 583 Query: 321 KIASDPMNSA--NRRIDILV 338 + NRRI+ ++ Sbjct: 584 IADNGTEEGREENRRIEFVL 603 >gi|325121713|gb|ADY81236.1| OmpA/MotB domain protein [Acinetobacter calcoaceticus PHEA-2] Length = 255 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++ +L ++ L I GHTD+ A N +LS DRA + Sbjct: 154 FESGSAVLTDAGQKILDEMAIALNKVGGKKVKIVGHTDS---SGDATKNLKLSQDRALAV 210 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ + D +S G + + NRRI+ V Sbjct: 211 KNYLISKSIPADHLST-EGLGSSKPVADNTSPEGRKKNRRIEFTVL 255 >gi|229121280|ref|ZP_04250511.1| OmpA/MotB domain protein [Bacillus cereus 95/8201] gi|228662125|gb|EEL17734.1| OmpA/MotB domain protein [Bacillus cereus 95/8201] Length = 224 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 75/215 (34%), Gaps = 9/215 (4%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + ++ F + + L K + + + + Sbjct: 6 RPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTI 65 Query: 180 KEKILAMKRKKRL-QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K + + ++ L V +N + V TG+ + I+D +FD Sbjct: 66 PDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNL---IFD 122 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQ 297 + PE ++ ++ I + GHTD+ P N NW LS RA + Sbjct: 123 TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH 182 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDPMNSAN 331 L++ V + R++ + G+A + + +D N Sbjct: 183 HLIEVYNVDDKRLAAV-GYADTKPVVPNDS--PQN 214 >gi|84624974|ref|YP_452346.1| putative lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84368914|dbj|BAE70072.1| putative lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 266 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 77/233 (33%), Gaps = 8/233 (3%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + G + R+ NN+ S + + S + + + + Sbjct: 39 RPVIVEGVVPDQATKARILNNLRDTYGSARIVDRVQVESIPSPPNWGEYVAKMVSPGLKR 98 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 L + ++ + Q +L+ + + + + G+L + Sbjct: 99 VAAGKLEVNGQAVRISGQVVNEAQRQQVASDLSLASNTSYTVTNSLKLGGSEQGVLDQTL 158 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 R F SS P + +L ++ E ++ + I GHTD N LS Sbjct: 159 GNRIIE-FQSGSSRLTPLGMRILDEMVEKMSQMKDARFLIIGHTDNV---GQRESNLALS 214 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 RA + +++ G+ R++ + G + + + NRRI ++ Sbjct: 215 QARAQAVKDYIVQKGIDGARMN-VQGKGPDQPVADNASPDGRARNRRIQFKIQ 266 >gi|255530915|ref|YP_003091287.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366] gi|255343899|gb|ACU03225.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366] Length = 175 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 + F+ +S + + VL +I + V + GH+ A N LS+ Sbjct: 67 NFSNVQFEFNSGVLKTASFEVLDRIAAEMKKDPAVKFVLNGHSS---IEGSAAHNMSLSV 123 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 DRA S L+ +GVS + I G+ + ++ + NRR++ Sbjct: 124 DRANSVKLYLVNAGVSAANL-SIKGYGATQPVASNSTEEGKAQNRRVEF 171 >gi|226946149|ref|YP_002801222.1| OmpA family protein [Azotobacter vinelandii DJ] gi|226721076|gb|ACO80247.1| OmpA family protein [Azotobacter vinelandii DJ] Length = 222 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV + I + + F S+ L + Sbjct: 76 DKQEAQLRQQMAGTGVEVQRQGNDIKLIM---PGNITFATGSAEIASNFYTPLNDLANSF 132 Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I + GHTD++ + N LS RA S L+ GV+ R++ G Sbjct: 133 KQYDQNSIEVIGHTDST---GSYQTNMSLSQRRAQSVANYLVAQGVNGARVTT-RGAGPD 188 Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343 ++ S NRR++I + G Sbjct: 189 SPVASNATESGRSQNRRVEINLRPLPG 215 >gi|254419256|ref|ZP_05032980.1| Rickettsia 17 kDa surface antigen family [Brevundimonas sp. BAL3] gi|196185433|gb|EDX80409.1| Rickettsia 17 kDa surface antigen family [Brevundimonas sp. BAL3] Length = 224 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + + A+ GV +++ + F + S P + VL + Sbjct: 82 QYMDRQQRAMEAELSGSGVGVARQGDNLVLRMPSDVT---FATNQSSIDPRFLPVLDDVA 138 Query: 257 EVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL I + GHTD++ N LS RA S L++ GV +R+ ++G Sbjct: 139 RVLQEYDRSTIDVIGHTDST---GGDAINQPLSERRAASVASELVRRGVIAERLY-VAGN 194 Query: 316 AHHRLKIASDPMN--SANRRIDILVE 339 + ++ + NRR++IL+ Sbjct: 195 SSRNPVASNATPEGKAQNRRVEILIR 220 >gi|150377808|ref|YP_001314403.1| OmpA/MotB domain-containing protein [Sinorhizobium medicae WSM419] gi|150032355|gb|ABR64470.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419] Length = 420 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + FD S P +L I L + + I GHTDA A N RLSL Sbjct: 77 DVHGLSFDTGQSTLQPSAKPLLDDIATALKNFPDWGLRIVGHTDA---SGSAESNERLSL 133 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 +RA + L++ G+ ++ G +R +++ + NRR++++ Sbjct: 134 ERADTIKAALVERGIDAGKLLAA-GAGQNRPIASNETDEGRALNRRVELM 182 >gi|218460723|ref|ZP_03500814.1| flagellar motor protein MotB [Rhizobium etli Kim 5] Length = 72 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 32/72 (44%), Positives = 48/72 (66%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M+ + + ++ II+K+ D + G+WKI YADFMT +MAFFLVMW++NA +++ Sbjct: 1 MSEGENHHHGRNEIIIVKRHGGGDHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANEE 60 Query: 61 TKKAIEQYFNPF 72 TK A+ YFNP Sbjct: 61 TKAAVATYFNPI 72 >gi|149190763|ref|ZP_01869029.1| outer membrane protein OmpA [Vibrio shilonii AK1] gi|148835419|gb|EDL52390.1| outer membrane protein OmpA [Vibrio shilonii AK1] Length = 338 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ +S+ T + ++ + ++I G+TD+ N R+S +RA S Sbjct: 223 FEFNSTKLNENTKSDYDPLIALMQDHPDSTVTITGYTDS---SGPEEVNQRISEERAESI 279 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 L G+ R+ +SG + + NRR++I V Sbjct: 280 AAYLESQGIDRSRM-TVSGMGEANPIADNSTKEGRAQNRRVEITV 323 >gi|153841945|ref|ZP_01993455.1| inner membrane lipoprotein YiaD [Vibrio parahaemolyticus AQ3810] gi|149745429|gb|EDM56680.1| inner membrane lipoprotein YiaD [Vibrio parahaemolyticus AQ3810] Length = 170 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 9/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L + GV + L ++ N F SS L+ + +L Sbjct: 31 DQQEAELRRALLNSGVQVQRVGENQL--LLRMENGIGFSSSSYQLDASIHNTLRGVARIL 88 Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + G+TD++ N LS RA S Q L+ V+ R G+ Sbjct: 89 VEYPDTSLVIDGYTDST---GSESYNQTLSERRAESVRQFLVSQKVAPGRAIA-RGYGER 144 Query: 319 RLKIASDPMNSA--NRRIDILVE 339 ++ NRR++I + Sbjct: 145 NPICSNQTSEGRACNRRVEIQIL 167 >gi|255019372|ref|ZP_05291483.1| outer membrane porin OprF [Acidithiobacillus caldus ATCC 51756] gi|254971192|gb|EET28643.1| outer membrane porin OprF [Acidithiobacillus caldus ATCC 51756] Length = 226 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + P+ + + ++ + + + + I + GHTD N +LS RA + Sbjct: 39 FDYNKATLRPDALKTVGELAQTMRQNPQLFIGLDGHTDNI---GGTDFNQKLSEARANAV 95 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 L+ G+ RI G + + + NRR++++ Sbjct: 96 KAALVAQGIDASRI-ATRGLGATQPVADNATDAGRAKNRRVEVV 138 >gi|122879266|ref|YP_202154.6| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Xanthomonas oryzae pv. oryzae KACC10331] Length = 270 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 77/233 (33%), Gaps = 8/233 (3%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + G + R+ NN+ S + + S + + + + Sbjct: 43 RPVIVEGVVPDQATKVRILNNLRDTYGSARIVDRVQVESIPSPPNWGEYVAKMVSPGLKR 102 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 L + ++ + Q +L+ + + + + G+L + Sbjct: 103 VAAGKLEVNGQAVRISGQVVNEAQRQQVASDLSLASNTSYTVTNSLKLGGSEQGVLDQTL 162 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 R F SS P + +L ++ E ++ + I GHTD N LS Sbjct: 163 GNRIIE-FQSGSSRLTPLGMRILDEMVEKMSQMKDARFLIIGHTDNV---GQRESNLALS 218 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 RA + +++ G+ R++ + G + + + NRRI ++ Sbjct: 219 QARAQAVKDYIVQKGIDGARMN-VQGKGPDQPVADNASPDGRARNRRIQFKIQ 270 >gi|238783060|ref|ZP_04627087.1| Inner membrane lipoprotein yiaD [Yersinia bercovieri ATCC 43970] gi|238716061|gb|EEQ08046.1| Inner membrane lipoprotein yiaD [Yersinia bercovieri ATCC 43970] Length = 219 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SS P L + Sbjct: 80 YMDVQEAKLREKMNGTGVSVTRQGDNIVLNM---PNNVTFDTDSSNLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G TD+ N LS RA S L+ GV+ +R+ + SG Sbjct: 137 VLKEYDKTAVNVTGFTDS---SGARAHNMTLSQQRADSVGSALIMQGVAANRV-RTSGAG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PDNPVASNSTAAGKAQNRRVEITL 216 >gi|331006223|ref|ZP_08329545.1| Outer membrane protein [gamma proteobacterium IMCC1989] gi|330419980|gb|EGG94324.1| Outer membrane protein [gamma proteobacterium IMCC1989] Length = 338 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 10/112 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARDNWRLSLDRAYSA 295 F +S + ++ + + ++ G HTD++ A N LS R Sbjct: 224 FASNSDKVPSAYLPEIENLATFMQQYPTATAVIGGHTDST---GSAEYNQSLSQRRVNEV 280 Query: 296 YQVL-MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID--ILVEDRQ 342 ++L GV R+S I G+ + +D + NRR++ I VE + Sbjct: 281 ARLLSANYGVDASRVSAI-GYGEAQPIAGNDTAVDRAKNRRVEASITVEVEE 331 >gi|332290734|ref|YP_004429343.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332168820|gb|AEE18075.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 293 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 76/244 (31%), Gaps = 11/244 (4%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 + + S K E E +E + T L Sbjct: 28 EARQQETQDLLNSATVKLNSCLEEKASATTRVKSLEERIAEMRKDKNELIQSSKDLTMLT 87 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD--NIVKGVLFETTRT 222 K L L ++ + + + L + ++ L + + + Sbjct: 88 KQGASNLEKSLESLKEKDLKINRLQDALTKKDSVTLALVTSLKKEVGINDTDIEINVEKG 147 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPF--RN 279 + IS+ D+ +F S +L K+ V+ + GHTD P+ Sbjct: 148 VVFISLSDK---VLFKSGSYNITSRAEEILGKVATVINGKPNFEALVEGHTDNVPYNKGG 204 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 + DNW LS RA + + L+ G + ++ G + + + + NRR I Sbjct: 205 VLIDNWDLSAKRATAIVRKLVDLGANPAQLIAA-GRSEFVPLVDNSTAENRSTNRRTKIY 263 Query: 338 VEDR 341 V + Sbjct: 264 VLPK 267 >gi|220917668|ref|YP_002492972.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955522|gb|ACL65906.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 259 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 8/177 (4%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGILI 226 + + P + + + ++ L K+I + V + V + + Sbjct: 71 DGPPSEGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTV 130 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDN 284 + FD + P+ + +L I + + + GHTD +P N Sbjct: 131 RLAATE---FFDPGQAALRPQALALLDAIAVEIVPLERPLRVEGHTDETPVGSGGRWMSN 187 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339 W LS RA + L ++ + + G + NRR+++++E Sbjct: 188 WELSATRAATVVGYLEQAHAARPALLAAVGLGSAHPLSTDATPEAHERNRRVELVLE 244 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 49/144 (34%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W + YADFMT+L AFF+VM+ ++ D+ + T G + P Sbjct: 16 WLVSYADFMTLLFAFFVVMYAVSRVDNKRIVQATESIRWAMHFSGTGGTGALPLFDGPPS 75 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 + ++ + +++ + S E + ++ + Sbjct: 76 EGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTVRLAAT 135 Query: 153 KGKDLCKSTDLEKSINKEENYFLP 176 + D ++ +++ + + Sbjct: 136 EFFDPGQAALRPQALALLDAIAVE 159 >gi|197116705|ref|YP_002137132.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem] gi|197086065|gb|ACH37336.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem] Length = 169 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 8/117 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 + +++ F + P + I ++ + + GHTD N + Sbjct: 56 VQNEKGPIKFKTGKAEIDPSCDKTMTAIAAIMTDYPGFHVQVDGHTDNV---GKPEANQK 112 Query: 287 LSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 LS DRA + + L+ V R+S GF + + + NRR+D V Sbjct: 113 LSQDRADAVVKYLVDKKAVDAKRLSA-KGFGDSKPIADNKTKAGQAKNRRVDFTVTK 168 >gi|331004883|ref|ZP_08328300.1| Outer membrane protein [gamma proteobacterium IMCC1989] gi|330421337|gb|EGG95586.1| Outer membrane protein [gamma proteobacterium IMCC1989] Length = 197 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ L + IS+ GH D+ N LS RA + Sbjct: 90 FATNSAELKDAGKAALNTFATRAKALNVSGISVVGHADSR---GAESYNQALSEKRANTV 146 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 L G+ + + G ++D + NRR+DI V Sbjct: 147 KSYLESQGIVGS-LIRAEGQGETSPVASNDTAEGRAQNRRVDITVRG 192 >gi|322417875|ref|YP_004197098.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18] gi|320124262|gb|ADW11822.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18] Length = 198 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 7/178 (3%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 K + + + P + + A + ++ + ST + + + V + Sbjct: 23 AKQQAVKADQAVAPSATAQPSAPVQPQQPAASQQASPSTTALSASSIKAEPVQPAAAGSQ 82 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 + D FD S + L L I + G+ D Sbjct: 83 QGAAAADALEKIYFDFDSDLLSDAARKTLTDNFVKLKAMPNVKIRVEGNCDER---GSDE 139 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338 N LS RA +A + L GV R+S I G+ + + SD + NRR + + Sbjct: 140 YNLALSERRAQAAVKYLTALGVPASRLSAI-GYGEEKPADSGHSDDAWARNRRDEFNI 196 >gi|282600293|ref|ZP_05973733.2| membrane protein OmpA-family [Providencia rustigianii DSM 4541] gi|282565742|gb|EFB71277.1| membrane protein OmpA-family [Providencia rustigianii DSM 4541] Length = 586 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 57/175 (32%), Gaps = 12/175 (6%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV----LFETTRTGILIS 227 ++ + LA L + + + Sbjct: 387 QQLQEDAAQLSRWEREGIPTAYSLALYQGERLLPYLHTLLGSWAPTQPKIIPNAPVLAPE 446 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 ++ + +FD + VL + + I + G+TD++ N + Sbjct: 447 MVTLDSLSLFDVGQYTLKTDATKVLVDALLNIKAKSGWLIVVSGYTDST---GNPELNQK 503 Query: 287 LSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 LSL RA S +++ S +S + G+ + +++ + NRR++I + Sbjct: 504 LSLKRAESVRDWMIQTSDISPT-CFAVQGYGQNNPVASNETSEGRAQNRRVEIRL 557 >gi|254449210|ref|ZP_05062659.1| outer membrane protein [gamma proteobacterium HTCC5015] gi|198261187|gb|EDY85483.1| outer membrane protein [gamma proteobacterium HTCC5015] Length = 229 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 58/204 (28%), Gaps = 14/204 (6%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 R + + K+ + ++AK+ + Sbjct: 28 SSGESVRTGTGDCVKTGQWEEAHKGQDCGMRANDSKRRIPTPVSKKPIDMDEVAKRKKAQ 87 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + + I +S + F S+ + L + L Sbjct: 88 EKAAAEQKAEEQKKALDSVRSINLS-----SGAAFSTGSAKLSSKGKESLDDLAMKLKAL 142 Query: 263 TE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + I GHTD+ N R+S RA + L++ GV + G+ + Sbjct: 143 GNGVKSVQIDGHTDSQ---GSESLNQRVSEQRAQAVKSYLVEQGVDGS-LINTKGYGESQ 198 Query: 320 LKIASDPM--NSANRRIDILVEDR 341 + + NRR++I V+ Sbjct: 199 PVADNATAAGRAQNRRVEISVDGD 222 >gi|149277299|ref|ZP_01883441.1| OmpA/MotB [Pedobacter sp. BAL39] gi|149232176|gb|EDM37553.1| OmpA/MotB [Pedobacter sp. BAL39] Length = 464 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ +SS+ E+ L K+ VL + +++ G+ + A N +LS DRA S Sbjct: 364 FEFNSSVLKTESYPTLDKLSSVLRENGGKVTLHGYASSE---GTAAYNVKLSKDRANSVK 420 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L+ SGV+ + G ++D NRR++ Sbjct: 421 TYLVNSGVNSSAVVT-KGHGEANPIASNDTEEGRIQNRRVE 460 >gi|120437200|ref|YP_862886.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] gi|117579350|emb|CAL67819.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] Length = 522 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 19/274 (6%) Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD-LKIGSTNQKKQYQRLENNIFYLSNS 137 SK F P S + + ++E T + L G ++ ++ L + Sbjct: 241 GSKLYFASDMPGGSGSFDIYVVDVNEDGTYGTPQNLGAGVNTAQRDQFPFISDEDVLYFT 300 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +L +G E + +++ E++ +R D Sbjct: 301 SDGHQGFGNLDIFRTEGDFSEVENLGESINSGSDDFAFVIKESEEMGYFASNRRGTDNLY 360 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + ++ V ET+ I I + FD + E+ VL + Sbjct: 361 QFTREENEIIE---APTVTDETSGQDI---IPIDGSKIYFDFDKATIKAESKPVLDSVVT 414 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + + + H DA N LS RA S L++ G+ + R++ G+ Sbjct: 415 YMNDYPNIKVKVESHADAR---GSDSYNMALSKRRAASTVDYLVEKGIDKARLTS-EGYG 470 Query: 317 HHRLKIA-------SDPMNSANRRIDILVEDRQG 343 R ++ + NRR +V +R G Sbjct: 471 ESRPTNDCTQPTGCTNEQYAKNRRSAFVVSNRNG 504 >gi|313674269|ref|YP_004052265.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312940967|gb|ADR20157.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 526 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 49/111 (44%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q + +F + +S + L ++ +L + I + GHTD + A+ N LS Sbjct: 417 QLKSVLFKRGTSEIKDGSFEELDRVYTMLKKNPTVEIELAGHTDNT---GSAKLNIELSQ 473 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 R+ + L++ G++ R+ G+ R ++ + NRR++ + Sbjct: 474 KRSDKIKEYLVEKGINPKRLQS-KGYGGARPIASNKSEATRKLNRRVEFTI 523 >gi|149915641|ref|ZP_01904167.1| OmpA/MotB [Roseobacter sp. AzwK-3b] gi|149810533|gb|EDM70376.1| OmpA/MotB [Roseobacter sp. AzwK-3b] Length = 218 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ L + E + GHTD N L RA + Sbjct: 74 FAFDSAHLDAAARNTLNAQASWIKQFPEVRFRVYGHTDKV---GSESYNRHLGQRRANAV 130 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L G+S R+ + + + + ++ NRR Sbjct: 131 VNYLTSHGISRSRLEAVVSYGETQPVVVTEGREPRNRR 168 >gi|325526573|gb|EGD04123.1| OmpA/MotB domain-containing protein [Burkholderia sp. TJI49] Length = 112 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290 R +FD + P + L ++ + ++ + G+TD+ N LSL Sbjct: 4 RGDALFDFDKANLKPAGVRALDEVIDNARGKRFRLVEVAGYTDSI---GSDSYNNALSLR 60 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA S L G+ +R+ + GF + + NRR++I++E Sbjct: 61 RAKSVADYLRAHGLDAERM-AVDGFGKSNPVASDATDAGRAQNRRVEIVLEQ 111 >gi|260774918|ref|ZP_05883819.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC BAA-450] gi|260609173|gb|EEX35331.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC BAA-450] Length = 321 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 7/109 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ PE+ + L+++ + + + + G+TD A N +LS RA Sbjct: 210 VSFKFDSAELTPESEMALKEVASFMGEYPQATVDVVGYTDT---SGPAVYNQKLSEQRAQ 266 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 S V+ + GV++ RI + G ++ + NRR ++ V + Sbjct: 267 SVADVIAEYGVNQSRIH-VEGAGESNPIATNETRDGRIENRRAEVTVNE 314 >gi|295085810|emb|CBK67333.1| Flagellar motor protein [Bacteroides xylanisolvens XB1A] Length = 256 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 20/217 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195 Q +L RD+ K + + ++N E L L +K + ++R + +L Sbjct: 25 GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 84 Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 I + + + + + +++ D+ +F S+ Sbjct: 85 QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 141 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302 L K+ EVL T++ I GHTD P +DNW LS+ RA S ++L+K+ Sbjct: 142 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 201 Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 V+ +I + SG + ++ S NRR +I+ Sbjct: 202 NVNPLQI-QPSGRGEYMPIDDNETIEGRSKNRRTEII 237 >gi|167905004|ref|ZP_02492209.1| OmpA family protein [Burkholderia pseudomallei NCTC 13177] Length = 524 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 18/167 (10%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT----------PMFD 238 + RL+ I TL V G+ L +++D +F Sbjct: 350 QARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLFA 409 Query: 239 KSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 + P + +LA+ + + I GH D+ N++LS RA + Sbjct: 410 AGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS---SGSDAANFQLSEARARAIR 466 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + GV + R + G +D + NRR+++L+ Sbjct: 467 DWFVDQGVLKTRFI-VQGAGDTHPIADNDSSSGRAQNRRVEVLLIPD 512 >gi|71907729|ref|YP_285316.1| hypothetical protein Daro_2103 [Dechloromonas aromatica RCB] gi|71847350|gb|AAZ46846.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 214 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 20/164 (12%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 ++++++ + + L+G +A T I IS +F + Sbjct: 46 SLESEIQKRQQEEQRRMALEKALAGPLASG-----RVTLTNGKIGIS-----GNVLFALN 95 Query: 241 SSIPLPETIVVLQKIGEVLAHSTE----VISIRGHTDASPFRNI---ARDNWRLSLDRAY 293 S PE +L+ + + +A ++ + G TD P R DNW LS RA Sbjct: 96 SDQLQPEGKQLLKSLSQPIAAYLGASEQMLMVSGFTDDMPVRGSNRQFADNWELSAQRAL 155 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335 + + L+ GV I + F + + + NRR++ Sbjct: 156 TVTRTLIDDGVPASSIFAAA-FGAQQPVADNAAAEGRARNRRVE 198 >gi|167576592|ref|ZP_02369466.1| hypothetical protein BthaT_00570 [Burkholderia thailandensis TXDOH] Length = 433 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 75/229 (32%), Gaps = 12/229 (5%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +Q ++ + + L +S + + + Sbjct: 205 EQIRQRLWTLITGARDAIQPELSPHWRGAEPGKLPLLRSVPAWATGSFVFLLLFGLFAFY 264 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------RN 233 + + + L+ I+ + +L + L+++ + R Sbjct: 265 QYRLLTERNALEARILAIAKDEPASPQQRLRLSILLKNEIARGLLTVDEDDTRSVVVFRG 324 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRA 292 MF S LPE VL K+ +A +++ GH+D P R +N LS RA Sbjct: 325 DSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNNLVLSEKRA 384 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 Q+L++ G D I G + + S NRR++I V Sbjct: 385 AYVAQILVQRGTPADHIRS-EGRGDAQPVAENTTPAGRSRNRRVEIAVT 432 >gi|309782503|ref|ZP_07677227.1| OmpA domain protein [Ralstonia sp. 5_7_47FAA] gi|308918840|gb|EFP64513.1| OmpA domain protein [Ralstonia sp. 5_7_47FAA] Length = 415 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 7/134 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V E T ++ MF + + +L KI + Sbjct: 282 LKDEIARGQVKVEEDATHSAVTFRGDD---MFAGGRADVNAKVQPLLDKIASEITKVPGK 338 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GH+D P + N LS +RA + L GV++ R+ + G + Sbjct: 339 VTVTGHSDNQPIKTAKFPSNQVLSEERAVHVSEYLASRGVAQGRLEAV-GKGDTEPVADN 397 Query: 325 DP--MNSANRRIDI 336 +ANRR+ I Sbjct: 398 STWNGRAANRRVQI 411 >gi|241663269|ref|YP_002981629.1| type VI secretion system OmpA/MotB family protein [Ralstonia pickettii 12D] gi|240865296|gb|ACS62957.1| type VI secretion system OmpA/MotB family protein [Ralstonia pickettii 12D] Length = 415 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 7/134 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V E T ++ MF + + +L KI + Sbjct: 282 LKDEIARGQVKVEEDATHSAVTFRGDD---MFAGGRADVNAKVQPLLDKIASEITKVPGK 338 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GH+D P + N LS +RA + L GV++ R+ + G + Sbjct: 339 VTVTGHSDNQPIKTAKFPSNQVLSEERAVHVSEYLASRGVAQGRLEAV-GKGDTEPVADN 397 Query: 325 DP--MNSANRRIDI 336 +ANRR+ I Sbjct: 398 STWNGRAANRRVQI 411 >gi|222055877|ref|YP_002538239.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] gi|221565166|gb|ACM21138.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] Length = 530 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 84/293 (28%), Gaps = 18/293 (6%) Query: 56 ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 A++++ K Q P +++ P + + I + Sbjct: 250 ASEEEEKDKKAQVVRPVKIMPISSLIKTALPAVPVSKLEVPVDPDKEEIVIKPFGQIVIP 309 Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 L + + Q K + + + E ++ ++ Sbjct: 310 AQPVAPPVVLPLMSREPKVQPVQPKVQPKVQPVVQPKVQEPKITKLETEITVEPKKEIPA 369 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 E+ A + S +S A I +L I Sbjct: 370 NLNPIEESSAEGVSPLYGIETRGDSLEISTAKAAPIATKMLVYRKFRFADI--------- 420 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAY 293 MF+ + E L ++ E + I GHTD+ N LS+ RA Sbjct: 421 MFEFGQADLSNEVKKSLSEVAEQARADKHWTYMRIDGHTDSI---GSTGYNMDLSVKRAI 477 Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 + L +K G+ ++ I G +L + NRR +IL +G Sbjct: 478 AIASYLIIKEGIDPSKVF-IKGLGKSKLIGDNSTTEGRRLNRRFEILFLVPKG 529 >gi|254464778|ref|ZP_05078189.1| OmpA/MotB [Rhodobacterales bacterium Y4I] gi|206685686|gb|EDZ46168.1| OmpA/MotB [Rhodobacterales bacterium Y4I] Length = 613 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 85/224 (37%), Gaps = 17/224 (7%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 Q+ +++ + DL ++ + + E+ + + Sbjct: 392 EQLGGLQAILDDYQTRDAAQQVQLQNLGQDLNAALARAASEERRRRLLEEQERKRLEAEA 451 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIV 250 + LA K + L ++ + T+ G+ I + +F S+ P V Sbjct: 452 EALASK-AQDLERYRSEFFGRLRDLLGTQEGVRIQGDRFVFASEVLFAPGSATLSPAGKV 510 Query: 251 VLQKIGEVLA--------HSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLM 300 + K+ +L + +I + GHTD +P DNW LS RA S + ++ Sbjct: 511 EIAKVVSILQSVVAAIPPEISWIIRVDGHTDDTPLVAHPKFNDNWELSQGRALSVVRYMV 570 Query: 301 KS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 ++ GV R+ +GF ++ ++ + NRRI++ ++ Sbjct: 571 EALGVPPSRL-AANGFGEYQPVNSAGTPEARAQNRRIELKFTEK 613 >gi|110597916|ref|ZP_01386198.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Chlorobium ferrooxidans DSM 13031] gi|110340493|gb|EAT58979.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Chlorobium ferrooxidans DSM 13031] Length = 229 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 10/142 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 N V GV E GI +++ + +F SS + ++K+ + Sbjct: 82 QAAEIRNEVNGVQVEREGEGIRVTM---DSGILFTSGSSTLTSTSRANIEKLARIFNRYN 138 Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GHTD + A N LS RA S ++L GVS+ R+S + G+ R Sbjct: 139 DTKVVIEGHTDNT---GSAASNQLLSERRAESVAKLLSAYGVSDRRLSPV-GYGQSRPVA 194 Query: 323 ASDPMNSA--NRRIDILVEDRQ 342 ++D NRR+++L+ + Sbjct: 195 SNDTEYGRQNNRRVEVLIYANE 216 >gi|91218366|ref|ZP_01255310.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC 700755] gi|91183504|gb|EAS69903.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC 700755] Length = 277 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 90/242 (37%), Gaps = 10/242 (4%) Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163 + N + + + + + LE+ + + + + K + ++G + + Sbjct: 27 TELEGNLNETESELVQTRLEKEDLESQMEQIEMRVEGYNNKIASLSTEKEGMMVQVPNEN 86 Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + L ++ K L+D + + T Sbjct: 87 LVLSENNKAAMRKTLKSVPAAKLEGAKSLKDSLNIAIAHNISKNMGESGSDLNISIEETM 146 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 + I+I D +F SS + +L +I +VL + + GHTD+ + + Sbjct: 147 VKINIDDNL---LFGDSSFRVGSDADEILSRIAKVLNSEPSLEVLVEGHTDSRTIKKDSY 203 Query: 283 --DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 DNW LS R+ + + L GV+ D++ ++G + + + +D + + NRR I+ Sbjct: 204 IIDNWDLSARRSAAIVRRLENKFGVASDQLI-VAGRSSYDPLVPNDTKDNMAKNRRTQIV 262 Query: 338 VE 339 + Sbjct: 263 IM 264 >gi|58427732|gb|AAW76769.1| outer membrane protein and related peptidoglycan-associated (lipo)proteins [Xanthomonas oryzae pv. oryzae KACC10331] Length = 272 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 77/233 (33%), Gaps = 8/233 (3%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 + G + R+ NN+ S + + S + + + + Sbjct: 45 RPVIVEGVVPDQATKVRILNNLRDTYGSARIVDRVQVESIPSPPNWGEYVAKMVSPGLKR 104 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 L + ++ + Q +L+ + + + + G+L + Sbjct: 105 VAAGKLEVNGQAVRISGQVVNEAQRQQVASDLSLASNTSYTVTNSLKLGGSEQGVLDQTL 164 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 R F SS P + +L ++ E ++ + I GHTD N LS Sbjct: 165 GNRIIE-FQSGSSRLTPLGMRILDEMVEKMSQMKDARFLIIGHTDNV---GQRESNLALS 220 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 RA + +++ G+ R++ + G + + + NRRI ++ Sbjct: 221 QARAQAVKDYIVQKGIDGARMN-VQGKGPDQPVADNASPDGRARNRRIQFKIQ 272 >gi|312173865|emb|CBX82119.1| putative type VI secretion system-associated hypothetical protein [Erwinia amylovora ATCC BAA-2158] Length = 551 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 15/164 (9%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-------RNTPMFD 238 + +++ + + + + + + + LI + +FD Sbjct: 374 ERWQRQGEPMRYGLGYYPGQRLWLVLQQAIDSWVPAPPSLIPVEKDTPQAVRLDALSLFD 433 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 P + +L K + I + GHTD + A N LS RA + Sbjct: 434 TGKYQLKPNSTKMLVKALMGIKAKPGWLIVVAGHTDNT---GEANANQVLSHKRAEALRH 490 Query: 298 V-LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L S VS + G+ R ++D + NRR++I + Sbjct: 491 WMLSTSDVSPT-CFAVQGYGATRPIASNDTVEGREANRRVEISL 533 >gi|292489687|ref|YP_003532577.1| putative type VI secretion system-associated protein [Erwinia amylovora CFBP1430] gi|292898097|ref|YP_003537466.1| outer membrane protein [Erwinia amylovora ATCC 49946] gi|291197945|emb|CBJ45046.1| putative outer membrane protein [Erwinia amylovora ATCC 49946] gi|291555124|emb|CBA23275.1| putative type VI secretion system-associated hypothetical protein [Erwinia amylovora CFBP1430] Length = 551 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 15/164 (9%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-------RNTPMFD 238 + +++ + + + + + + + LI + +FD Sbjct: 374 ERWQRQGEPMRYGLGYYPGQRLWLVLQQAIDSWVPAPPSLIPVEKDTPQAVRLDALSLFD 433 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 P + +L K + I + GHTD + A N LS RA + Sbjct: 434 TGKYQLKPNSTKMLVKALMGIKAKPGWLIVVAGHTDNT---GEANANQVLSHKRAEALRH 490 Query: 298 V-LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L S VS + G+ R ++D + NRR++I + Sbjct: 491 WMLSTSDVSPT-CFAVQGYGATRPIASNDTVEGREANRRVEISL 533 >gi|167826034|ref|ZP_02457505.1| ompA family protein [Burkholderia pseudomallei 9] Length = 247 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 18/247 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG------ 154 + + + G + L + + N + + Sbjct: 4 AGATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPN 63 Query: 155 --KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 ++ K + + + + + + + Q LA +++ L+ I Sbjct: 64 WSANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IK 121 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 G+ + G+L + R F+ S+ P+ +L ++ LA + I GH Sbjct: 122 NGLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGH 180 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329 TD N LS RA + L+ G++ +++ +G + +D + Sbjct: 181 TDN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRA 236 Query: 330 ANRRIDI 336 NRRI+ Sbjct: 237 RNRRIEF 243 >gi|116249829|ref|YP_765667.1| hypothetical protein RL0063 [Rhizobium leguminosarum bv. viciae 3841] gi|115254477|emb|CAK05551.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 418 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 7/133 (5%) Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI- 266 ++ K E + + F S P +L I L + + Sbjct: 52 QEDEAKHYSKEAMQQALQTRDQYDVYGLRFGVGKSTLQPGAETLLDDIATALKNFPDWSL 111 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 I GHTDA A N RLSL+RA + L++ GV+ DR+ G R +++ Sbjct: 112 RIVGHTDA---SGNAETNERLSLERANAIKAALVERGVNTDRLLAA-GAGQTRPIASNET 167 Query: 327 MNSA--NRRIDIL 337 NRR++++ Sbjct: 168 AEGKALNRRVELV 180 >gi|110680553|ref|YP_683560.1| hypothetical protein RD1_3382 [Roseobacter denitrificans OCh 114] gi|109456669|gb|ABG32874.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 659 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 75/222 (33%), Gaps = 16/222 (7%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + + + + SE L + E+ E L +EK RL Sbjct: 441 DDAKERDAAQQVQLQSLGSELNTALARVAAEERRRAALEEAERVRLQEEKARLEAEAARL 500 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 K + S + VL I + +F+ + + E + Sbjct: 501 TAQTKNLEQYRSEFFGRL--RDVLGRQEGVRIEGDRFVFSSEVLFEPARADLSSEGQEEI 558 Query: 253 QKIGEVLA--------HSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMK- 301 K+ +L+ +I + GHTD P DNW LS RA S + ++ Sbjct: 559 AKVARILSSVADEIPPEIDWIIRVDGHTDNLPLSGVGQFADNWELSQGRALSVVKYMVDT 618 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 G+ +R+ +GF + D + NRRI++ +R Sbjct: 619 LGIPPNRL-AANGFGEFQPVAVEDTPEARAQNRRIELKFTER 659 >gi|62185545|ref|YP_220330.1| putative peptidoglycan-associated protein (periplasmic) [Chlamydophila abortus S26/3] gi|62148612|emb|CAH64384.1| putative peptidoglycan-associated protein (periplasmic) [Chlamydophila abortus S26/3] Length = 191 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S E + + ++ + I GHTD A N L RA + Sbjct: 87 FATDSYTIKGEENLAILSSLVRQMQKSPKATLYIEGHTDER---GAAAYNLALGARRANA 143 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 Q L+K G+S DR+ +S + + + ++ NRR + + R Sbjct: 144 VKQHLIKQGISADRLFTVS-YGKEQPINSGHNELAWQQNRRTEFKIHAR 191 >gi|312887507|ref|ZP_07747103.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] gi|311299995|gb|EFQ77068.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] Length = 630 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 FD + E+ L K+ L + I + GHTD + N LS +R Sbjct: 524 KNIFFDTNKYDIKDESKTELAKLIAFLNDNPSVKIEVSGHTDNV---GVDAINQTLSQNR 580 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + YQ L+ +S +R+ G+ + + NRR + + Sbjct: 581 AKAVYQYLIGQHISPNRLV-YKGYGKAQPIAPNTNEEGRKLNRRTEFKI 628 >gi|167583014|ref|ZP_02375888.1| OmpA domain protein [Burkholderia thailandensis TXDOH] Length = 324 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 36/242 (14%), Positives = 78/242 (32%), Gaps = 13/242 (5%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC-- 158 S + G + + + + + + + Sbjct: 86 SSPPPANAAPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEVGNVATPPNWSANV 145 Query: 159 -KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 K + + + + + + + Q LA +++ L+ I G+ Sbjct: 146 QKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKNGLRV 203 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276 + G+L + R F+ S+ P+ +L ++ LA I GHTD Sbjct: 204 SASEQGLLDQTLANRTIE-FETGSATLTPQGRTILDQMAGALAKMPNRTVEIIGHTDN-- 260 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 N LS RA + L+ G++ +++ +G + ++D + NRRI Sbjct: 261 -SGNRASNIALSQSRADAVKGYLVTKGIASQQLTT-TGVGPDQPIASNDSADGRARNRRI 318 Query: 335 DI 336 + Sbjct: 319 EF 320 >gi|157889026|dbj|BAF80970.1| fibronectin-binding protein [Campylobacter lari] Length = 328 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + PE +Q++G+VL + + +I GHTD N +LSL+RA Sbjct: 224 FGFDQTDINPEFAQKIQEVGKVLEENPQYYTILEGHTDNI---GPKAYNQKLSLERAKVV 280 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + L K+GV++++I G+ + K ++D + NRR++ Sbjct: 281 AKELEKTGVTKEKI-ATKGYGFDKPKASNDTKEGRAQNRRVE 321 >gi|153870654|ref|ZP_02000009.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS] gi|152072883|gb|EDN69994.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS] Length = 187 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 9/107 (8%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 +FD S++ PE+ +L++ + L I I GHTD N LS R+ Sbjct: 81 LFDFDSAVIKPESYPLLREFAKALQSGLVDAQIIIAGHTDN---SGTETYNLNLSEQRSQ 137 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 S L+ G+++ R+ I + ++ + NRR++ + Sbjct: 138 SVKAFLISAYGIADTRL-TIKAHGESQPIEPNETESGRMKNRRVEFI 183 >gi|83716132|ref|YP_438328.1| hypothetical protein BTH_II0126 [Burkholderia thailandensis E264] gi|167614770|ref|ZP_02383405.1| hypothetical protein BthaB_00705 [Burkholderia thailandensis Bt4] gi|257141357|ref|ZP_05589619.1| hypothetical protein BthaA_19439 [Burkholderia thailandensis E264] gi|83649957|gb|ABC34021.1| OmpA domain protein [Burkholderia thailandensis E264] Length = 433 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 90/297 (30%), Gaps = 29/297 (9%) Query: 47 FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS-KGIFDEQNPPERSSQNKIDLSIDEH 105 FFL++ + TD I + + D + E+ Q L Sbjct: 161 FFLLIGRMA-TDPQEYVDILEILYRVLGLGFEGRYSVVADGRRHLEQIRQRLWTLITGAR 219 Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + + L + + S G L Sbjct: 220 DAIQPELSPHWRGAEPGKLPLLRSVPAW---------ATGSFVFLLLFGLFAFYQYRLLT 270 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N E L E +R + L +I+ L + D+ V+F Sbjct: 271 ERNALEARILAIAKDEPASPQQRLRLSILLKNEIARGLLTVDEDDARSVVVF-------- 322 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDN 284 R MF S LPE VL K+ +A +++ GH+D P R +N Sbjct: 323 ------RGDSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPIRRADIPNN 376 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 LS RA Q+L++ G D I G + + S NRR++I V Sbjct: 377 LVLSEKRAAYVAQILVQRGTPADHIRS-EGRGDAQPVAENTTPAGRSRNRRVEIAVT 432 >gi|325529870|gb|EGD06709.1| hypothetical protein B1M_00030 [Burkholderia sp. TJI49] Length = 214 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + A++ +++ K + L+G +A R ++ I + Sbjct: 42 QLTSKLEEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGNVL 91 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S PE +L+ + L E++ I G D R DNW LS Sbjct: 92 FALNSDQLQPEGRDLLKTLAGPLAAYLKTRDEILMISGFADDQQVRAGNRLFADNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +GV + + F + ++ D + NRR++I Sbjct: 152 KRALTVTRALIDAGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199 >gi|325287672|ref|YP_004263462.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324323126|gb|ADY30591.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 285 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 12/208 (5%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL---QDLA 196 + + ++ TDL + L L ++ + K + + Sbjct: 65 EDQNDFLKANNQVLVDNMGNLTDLSAKGAENLEKSLESLKEKDLTIRKLNDAITRRDSVN 124 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +L G++ + + + + + +SI D+ +F S VL K+ Sbjct: 125 LSLVQSLKGVLGNLDDEDIEISVEKGVVFVSISDKL---LFSSGSYNVATRAKEVLGKVA 181 Query: 257 EVLAHSTEV-ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKIS 313 +V+ + + + GHTDA P+R + DNW LS+ RA + ++L + GV R++ Sbjct: 182 QVVNNKPDFEFMVEGHTDAVPYRKGVLLDNWDLSVKRATAVVRILQNEYGVDPKRMTAA- 240 Query: 314 GFAHHRLKIASDPMNSANRRIDILVEDR 341 G + + ++D + NRR I+V + Sbjct: 241 GRSQYIPVSSTD--KARNRRTRIVVLPK 266 >gi|260220860|emb|CBA28849.1| Outer membrane protein A [Curvibacter putative symbiont of Hydra magnipapillata] Length = 203 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ E L + + + I GHTDA+ N +LS+ R+ Sbjct: 94 DAFFDFDKSVLKAEGKAKLDDLVSKVKAINLEVIIAVGHTDAT---GDDSYNQKLSVARS 150 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L+ G+ ++R+ G + + + NRR++I V + Sbjct: 151 EAVKAYLVSKGIEKNRVYT-EGKGEKQPVADNKTKEGRAKNRRVEIEVVGTR 201 >gi|118616129|ref|YP_904461.1| outer membrane protein a OmpA [Mycobacterium ulcerans Agy99] gi|118568239|gb|ABL02990.1| outer membrane protein a OmpA [Mycobacterium ulcerans Agy99] Length = 332 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F P++ VL ++ + L + +++ G+TD N LS RA + Sbjct: 231 FGNDGVSLTPDSNKVLTQVVDKLRACPDAKVTVNGYTDN---SGSEGLNIPLSAQRAQTV 287 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ GV+ D I+ G ++D NRR++I+V Sbjct: 288 ADFLVAHGVATDHITA-KGLGSANPIASNDTAEGRIKNRRVEIVV 331 >gi|317153382|ref|YP_004121430.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943633|gb|ADU62684.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 254 Score = 93.9 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 86/248 (34%), Gaps = 8/248 (3%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 + K + + + + ++ L + T + Sbjct: 2 ADKKSESKPQPELQAGVKPSQPKPDPGIPAWMATFADMVTLLLCFFVLLLSFTNTDITNF 61 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 + + ++ P + + + +++ + + + A ++ Sbjct: 62 RLLMGSIQEALGVQYEDSGALSNPFADSSFKERQSVRENREIVEVGARLKDFIRARDLTS 121 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 + ++G+++ N+ MF + S+ P+ L+ + + + + I GHTD Sbjct: 122 MARVSSDKSGVMLRFN---NSAMFQRGSAELSPQAKPALEVVIAGMENKNFNLVINGHTD 178 Query: 274 ASPFRNIAR-DNWRLSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 + + NW LS RA + + L S +S +R+ + G+A + + S + Sbjct: 179 SETPESDLYTSNWELSAARAATCLRYILTHSDISANRMKAV-GYAGAKPIVPSTSEENRQ 237 Query: 331 -NRRIDIL 337 NRR++ Sbjct: 238 INRRVEFF 245 >gi|197122876|ref|YP_002134827.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] gi|196172725|gb|ACG73698.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] Length = 259 Score = 93.9 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 8/177 (4%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGILI 226 + + P + + + ++ L K+I + V + V + + Sbjct: 71 DGPPSEGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTV 130 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDN 284 + FD + P+ + +L I + + + GHTD +P N Sbjct: 131 RLAATE---FFDPGQAALRPQALALLDAIAAEVVPLERPLRVEGHTDETPVGSGGRWMSN 187 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339 W LS RA + L ++ + + G + NRR+++++E Sbjct: 188 WELSAARAATVVGYLEQAHAARPALLAAVGLGSAHPLSTDATPEAHERNRRVELVLE 244 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 54/155 (34%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W + YADFMT+L AFF+VM+ ++ D+ + T G + P Sbjct: 16 WLVSYADFMTLLFAFFVVMYAVSRVDNKRVVQATESIRWAMHFSGTGGTGALPLFDGPPS 75 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 + ++ + +++ + S E + ++ + Sbjct: 76 EGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTVRLAAT 135 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + D ++ +++ + + E+ L ++ Sbjct: 136 EFFDPGQAALRPQALALLDAIAAEVVPLERPLRVE 170 >gi|120556561|ref|YP_960912.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8] gi|120326410|gb|ABM20725.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8] Length = 401 Score = 93.9 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +SS+ ++++ + + E I GHTD+ A N LS RA + Sbjct: 296 FPTNSSVIDNAYDNEIRRVADFMEEYPETTVEIAGHTDS---AGEAGYNQFLSQRRAEAV 352 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L GV DR+S + G+ +D + NRR++ ++ R+ Sbjct: 353 AGRLTGPLGVDPDRVSAV-GYGEAEPVATNDTPAGRAQNRRVEARIQVRR 401 >gi|149190419|ref|ZP_01868691.1| outer membrane protein A [Vibrio shilonii AK1] gi|148835798|gb|EDL52763.1| outer membrane protein A [Vibrio shilonii AK1] Length = 343 Score = 93.9 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 9/122 (7%) Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280 I + + ++ +F S E + L I L E ++ G+TD++ Sbjct: 218 PIITTRLPEVHSSVLFAFDSEKI--ENVEALNPIVYRLTRYPETRATVYGYTDST---GP 272 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 N LS RA + Y+ L +GVS +++ +++G+ + +D NRR+ + + Sbjct: 273 NEYNQSLSERRANAVYEYLKHAGVSTEQL-RVAGYGEDSPVVPNDTTEHRHMNRRVTVHI 331 Query: 339 ED 340 E+ Sbjct: 332 EE 333 >gi|253568033|ref|ZP_04845444.1| outer membrane protein [Bacteroides sp. 1_1_6] gi|298387668|ref|ZP_06997219.1| lipoprotein PG3 [Bacteroides sp. 1_1_14] gi|251842106|gb|EES70186.1| outer membrane protein [Bacteroides sp. 1_1_6] gi|298259524|gb|EFI02397.1| lipoprotein PG3 [Bacteroides sp. 1_1_14] Length = 260 Score = 93.9 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 10/155 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + + +F ++ L K Sbjct: 96 KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNATLSAAAKSALSKFA 154 Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + +SI G+TD +RN + N LS +RA S L+ GVS ++I Sbjct: 155 NNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSRQKNLNLSQERAQSVASYLLNCGVSSNQI 214 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G ++D NRR+++ + + Sbjct: 215 KGVQGMGESDPIASNDTAAGREQNRRVEVYMYASE 249 >gi|319785152|ref|YP_004144628.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171040|gb|ADV14578.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 335 Score = 93.9 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 85/264 (32%), Gaps = 8/264 (3%) Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + +++ PE Q + + S L++ S+ + + + +F ++ + Sbjct: 76 ERNAMKDRSGPEWLKQQGRASELRYELPPGSSSLEVASSYEADLKAKGFSILFSCADQEC 135 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 L E+ + + L ++ + + Sbjct: 136 LVGNLRDLYLLGEQLDPTNGISTAYADHVRYLLAKLERPEGAIYVSAMAGEDKDRAVVFV 195 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + V E + +FD + PE+ L +I +VL Sbjct: 196 RVLEAKGMDPAKVATAAPEDLSDSLASQGSVNLYGILFDYNQDAVKPESKPALDEIAKVL 255 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317 + I GHTD A N LS RA + L+ G+ R+ G Sbjct: 256 TDKPALRLKIIGHTDN---AGSAAYNLDLSTRRAANVSAALVGGYGIDPARL-SFEGAGL 311 Query: 318 HRLKIASDP--MNSANRRIDILVE 339 R ++D + NRR++++V+ Sbjct: 312 SRPIESNDTDEGRAKNRRVELVVQ 335 >gi|330500929|ref|YP_004377798.1| hypothetical protein MDS_0015 [Pseudomonas mendocina NK-01] gi|328915215|gb|AEB56046.1| hypothetical protein MDS_0015 [Pseudomonas mendocina NK-01] Length = 443 Score = 93.9 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 4/117 (3%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNW 285 S++ R +F S+ + +L +I E +A + I GH+D P NW Sbjct: 324 SVVTIRGDELFSSGSASIRDDFQPLLLRIAEAVAKVKGQVRITGHSDNQPIATLRFPSNW 383 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 LS RA Q+L +R S G + ++ + NRR++I V Sbjct: 384 ALSRARAEEVLQILAARTGQAERFSA-EGLSDTEPLASNATAEGRAKNRRVEITVLA 439 >gi|296271167|ref|YP_003653799.1| OmpA/MotB domain-containing protein [Thermobispora bispora DSM 43833] gi|296093954|gb|ADG89906.1| OmpA/MotB domain protein [Thermobispora bispora DSM 43833] Length = 176 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 18/151 (11%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-----RNTPMFDKSSSIPLPETIVVLQ 253 I ++ L + ++ + + + D+ + +F + + Sbjct: 26 IQESIRDLAVSDFIRDLTLTIEPLEVETQVGDRTTVSISSDVLFAFDKADLTEVAKRRIA 85 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 ++ + L + V+ + GHTDA A N RLS RA + + L K+ V +I + Sbjct: 86 ELAKRLQNVKGVVLVEGHTDAL---GSAAYNLRLSRLRANAVKEELSKA-VPGLQIKAV- 140 Query: 314 GFAHHRLKIASDP--------MNSANRRIDI 336 G+ R + + NRR+ I Sbjct: 141 GYGETRPIAPNKTKDGKDNPEGRAKNRRVTI 171 >gi|167721446|ref|ZP_02404682.1| ompA family protein [Burkholderia pseudomallei DM98] Length = 243 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 18/246 (7%) Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG------- 154 + + G + L + + N + + Sbjct: 1 GATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPNW 60 Query: 155 -KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 ++ K + + + + + + + Q LA +++ L+ I Sbjct: 61 SANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IKN 118 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272 G+ + G+L + R F+ S+ P+ +L ++ LA + I GHT Sbjct: 119 GLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHT 177 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330 D N LS RA + L+ G++ +++ +G + +D + Sbjct: 178 DN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRAR 233 Query: 331 NRRIDI 336 NRRI+ Sbjct: 234 NRRIEF 239 >gi|163737814|ref|ZP_02145231.1| hypothetical protein RGBS107_19823 [Phaeobacter gallaeciensis BS107] gi|161389340|gb|EDQ13692.1| hypothetical protein RGBS107_19823 [Phaeobacter gallaeciensis BS107] Length = 655 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 96/308 (31%), Gaps = 17/308 (5%) Query: 50 VMWIINATDDDTKKAIEQY-FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 ++ ++ + A ++ +T + E ++ + L + Sbjct: 349 LLDALSQLEQANAAAADREVLQQRLLAALTEGEERAVETAELASLAEQRAALLAQARASL 408 Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 ++ ++ + + RD+ + + + Sbjct: 409 STEQAVSEEAQRQTALLNQQVAALREQLGGLQTLLDDYKARDAAQSVQMQNLGQDLNAAL 468 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + KR + + + L ++ + + G+ I Sbjct: 469 ARAAAEERRRRLLEESERKRLETEAEQLSSKAQDLEQYRSEFFGRLRDVLGNQEGVRIEG 528 Query: 229 IDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASP-- 276 + +F S+ + K+ +L +I + GHTD +P Sbjct: 529 DRFVFASEVLFAPGSADLSSAGRAEIGKVAGILQAVAAAIPPEINWIIRVDGHTDDTPLG 588 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRR 333 DNW LS RA S + ++++ G+ +R+S +GF ++ + + NRR Sbjct: 589 IHPKFADNWELSQGRALSVVRYMVQALGIPPERLSA-NGFGEYQPVNPAPTAVARAQNRR 647 Query: 334 IDILVEDR 341 I++ +R Sbjct: 648 IELKFTER 655 >gi|260062002|ref|YP_003195082.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501] gi|88783564|gb|EAR14735.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501] Length = 375 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 7/108 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F+ + L ++ + L + + +RGHTD+ N +LS R + Sbjct: 263 LFEFDAHQLTDAGKEALHRVYDALRSDLSLFLELRGHTDSR---GAPAYNQQLSEQRCRA 319 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340 + L G+ RI + GF R + + NRR++ L+ Sbjct: 320 VARYLEGLGLDSVRI-RWIGFGAARPVAGNSSESGRRRNRRVEFLIRS 366 >gi|153950607|ref|YP_001399766.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP 31758] gi|152962102|gb|ABS49563.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758] Length = 573 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD P +I +L + I + GHTD A+ N LSL Sbjct: 442 DSLSLFDVGKFQLKPGSIKMLVDALMNIRAKPGWLIVVAGHTD---ITGDAQANQILSLK 498 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + L S VS + G+ R ++ NRR++I + Sbjct: 499 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPVATNESAEGRAANRRVEISL 548 >gi|294644876|ref|ZP_06722614.1| OmpA family protein [Bacteroides ovatus SD CC 2a] gi|294808230|ref|ZP_06766993.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b] gi|292639770|gb|EFF58050.1| OmpA family protein [Bacteroides ovatus SD CC 2a] gi|294444557|gb|EFG13261.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b] Length = 256 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 20/217 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195 Q +L RD+ K + + ++N E L L +K + ++R + +L Sbjct: 25 GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 84 Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 I + + + + + +++ D+ +F S+ Sbjct: 85 QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 141 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302 L K+ EVL T++ I GHTD P +DNW LS+ RA S ++L+K+ Sbjct: 142 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 201 Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 V+ +I + SG + ++ S NRR +I+ Sbjct: 202 NVNPLQI-QPSGRGEYMPVDDNETIEGRSKNRRTEII 237 >gi|307729050|ref|YP_003906274.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003] gi|307583585|gb|ADN56983.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003] Length = 168 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 6/111 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + S + V+ + +L S + I + G+TD N +LS R Sbjct: 52 PEKALFDFNKSDVRSDASGVIDRSAVLLKRSKKPIIVEGYTDNV---GTLEYNQQLSEAR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 A + L+ GV+ DRI + G A++ ++D + NRR +I+V Sbjct: 109 AVAVGYALVARGVAMDRI-RTKGNAYNNPVASNDTPEGRALNRRTEIVVRG 158 >gi|163753146|ref|ZP_02160270.1| outer membrane protein, peptidoglycan-associated lipoprotein [Kordia algicida OT-1] gi|161326878|gb|EDP98203.1| outer membrane protein, peptidoglycan-associated lipoprotein [Kordia algicida OT-1] Length = 543 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 58/152 (38%), Gaps = 15/152 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIID-----QRNTPMFDKSSSIPLPETIVVLQK 254 D+ V + + I D + FD + + E+ + L K Sbjct: 396 EEEFESFRGDDFKHTVTIKLPQAKAEIVKEDEKLMIKIENIYFDYNKWMLKDESTLSLNK 455 Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 I +VL + E+ I HTD A N +LS RA SA L+K+G+ R+ + Sbjct: 456 IIDVLNENPEMKIEINAHTDNR---GRATYNSKLSNKRAASARAYLLKNGIDASRVIS-N 511 Query: 314 GFAHHRLKIASDPM--NSA---NRRIDILVED 340 G+ + + NRRI+ L+ + Sbjct: 512 GYGESQPIEDCGTKCSEAQHETNRRIEFLIVE 543 >gi|116249130|ref|YP_764971.1| putative outer membrane porin involved in nitrogen fixation [Rhizobium leguminosarum bv. viciae 3841] gi|16326461|gb|AAL17783.1|AF361470_3 ImpK [Rhizobium leguminosarum bv. trifolii] gi|115253780|emb|CAK12174.1| putative outer membrane porin involved in nitrogen fixation [Rhizobium leguminosarum bv. viciae 3841] Length = 510 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 67/202 (33%), Gaps = 8/202 (3%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 + E+ L + E P ++ + L Sbjct: 283 NRASDGTFERLARLPPRDMPSVLVKVPEPPRQQPPVVVAETPPPPPPPQVKPPSRLDNLL 342 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + L + K V + +L+ I N+ +F S+ + +LQ+IG LA Sbjct: 343 AFLQPEVEKKLVTLSDSNGRLLVRI---SNSGLFATGSAEVSQKFHDLLQRIGGALAAEN 399 Query: 264 EVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + G+TD P R NW LS RA + ++L ++ G A Sbjct: 400 FRAVVVGYTDNVPIRTVQFPSNWHLSEARAKAVGEILSSFTGPGAILT--EGRADTDPIA 457 Query: 323 ASDPMNSA--NRRIDILVEDRQ 342 A+D NRR +ILV Sbjct: 458 ANDTPEGREMNRRTEILVLTDP 479 >gi|304309686|ref|YP_003809284.1| outer membrane porin f precursor [gamma proteobacterium HdN1] gi|301795419|emb|CBL43617.1| outer membrane porin f precursor [gamma proteobacterium HdN1] Length = 353 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 8/124 (6%) Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279 + + R F SS P +QKI + + + ++I GHTD + Sbjct: 228 CELVKTVMESIRLNVQFATGSSAVAPRYHAEVQKIADFMKKYPDLTVTIEGHTDNT---G 284 Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 A N RLS RA S + L+ GV+ +R++ + G+ R ++ NRR+ Sbjct: 285 GAALNERLSSARANSVREELVNRFGVAANRVTSV-GYGPSRPVASNATAAGRQENRRVVA 343 Query: 337 LVED 340 ++E Sbjct: 344 VLEK 347 >gi|29346604|ref|NP_810107.1| OmpA family outer membrane protein [Bacteroides thetaiotaomicron VPI-5482] gi|29338500|gb|AAO76301.1| outer membrane protein, OmpA family [Bacteroides thetaiotaomicron VPI-5482] Length = 266 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 10/155 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + + +F ++ L K Sbjct: 102 KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNATLSAAAKSALSKFA 160 Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + +SI G+TD +RN + N LS +RA S L+ GVS ++I Sbjct: 161 NNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSRQKNLNLSQERAQSVASYLLNCGVSSNQI 220 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G ++D NRR+++ + + Sbjct: 221 KGVQGMGESDPIASNDTAAGREQNRRVEVYMYASE 255 >gi|167912756|ref|ZP_02499847.1| ompA family protein [Burkholderia pseudomallei 112] Length = 248 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 18/247 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG------ 154 + + + G + L + + N + + Sbjct: 5 AGATVSSPPPANATPGQVVAGGKVADEATKAAVLQRLRDTYGAANVVDQIEIGNVATPPN 64 Query: 155 --KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 ++ K + + + + + + + Q LA +++ L+ I Sbjct: 65 WSANVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMANALNPTYT--IK 122 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 G+ + G+L + R F+ S+ P+ +L ++ LA + I GH Sbjct: 123 NGLRVSASEQGLLDQTLANRTIE-FETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGH 181 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329 TD N LS RA + L+ G++ +++ +G + +D + Sbjct: 182 TDN---SGNRTSNIALSQARADAVKGYLVTKGIASQQLTT-TGVGPDQPIAPNDSADGRA 237 Query: 330 ANRRIDI 336 NRRI+ Sbjct: 238 RNRRIEF 244 >gi|85858721|ref|YP_460923.1| peptidoglycan-associated lipopeptide [Syntrophus aciditrophicus SB] gi|85721812|gb|ABC76755.1| peptidoglycan-associated lipopeptide [Syntrophus aciditrophicus SB] Length = 210 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 15/190 (7%) Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST-LSGLVADNIVKG 214 ++ + + + + P L+ E++ A ++ + Q L ++ L+G A Sbjct: 32 QEGEAAVEKAAGAEVKPATEPGLTPEELAAREKALKEQALKEQQERERLAGEKAAAEKAA 91 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273 +L+ I F+ S PE+ +LQK LA + + GH D Sbjct: 92 AEAAARAGEVLVDIN-------FEFDQSSLTPESREILQKHAAWLAAHSGYSLVIEGHCD 144 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--N 331 N L RA A + L+ G+ RI IS + ++ + N Sbjct: 145 DL---GTTEYNLALGERRAAEAMRFLVALGIDRSRIKTIS-YGEEMPLDPAETEEARAKN 200 Query: 332 RRIDILVEDR 341 RR +V + Sbjct: 201 RRAHFVVTPK 210 >gi|254254565|ref|ZP_04947882.1| OmpA domain protein [Burkholderia dolosa AUO158] gi|124899210|gb|EAY71053.1| OmpA domain protein [Burkholderia dolosa AUO158] Length = 226 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F ++ P L K+ T ++I G+TD+ N LS R Sbjct: 120 GDALFATGAATLTPAARASLDKLLSARDDRTYSNVTITGYTDSV---GSDASNVALSKRR 176 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 A + L G+ + R ++G ++ + NRR++I ++ Sbjct: 177 AQAVAAYLNAHGL-KTRTLTVTGRGSADPVASNATADGRASNRRVEISLQR 226 >gi|332886461|gb|EGK06705.1| hypothetical protein HMPREF9456_00579 [Dysgonomonas mossii DSM 22836] Length = 224 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 10/142 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + V I ++ + +F +SS + L L ++ Sbjct: 80 KKELEQINGAQVESINDGQAIKVTF---ESGILFATNSSTLSSASQSALSNFAASLNNNP 136 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I GHTD + N LS RA + Y L GVS R+ GF + Sbjct: 137 DTDVQIYGHTDNT---GSDAINNPLSEKRAQAVYNFLQTKGVSGSRMVS-QGFGSTQPVA 192 Query: 323 ASDP--MNSANRRIDILVEDRQ 342 + + NRR+++ + + Sbjct: 193 DNSSVAGRAQNRRVEVYILPNE 214 >gi|317407132|gb|EFV87132.1| chemotaxis motB protein [Achromobacter xylosoxidans C54] Length = 218 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 68/174 (39%), Gaps = 20/174 (11%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 LS + +K+++ + + L+ +A R ++ I Sbjct: 41 AVQLELSTQLEQEVKQRQEETQRRQTLEHALAAPLAAG----------RVTLINGRIGIS 90 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGE----VLAHSTEVISIRGHTDASPFRN---IARDNW 285 + +F +S PE VL+ + E L + E++ + G TD R DNW Sbjct: 91 GSVLFALNSDQLQPEGREVLKSLIEPLSAYLKANDEILMVSGFTDDQQVREGNRRFADNW 150 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 LS RA + + L+ GV + + F + ++ + + NRR++I+ Sbjct: 151 DLSAQRALTVTRALIDEGVPSSLVFAAA-FGAEQPVASNADEEGRAKNRRVEIM 203 >gi|209519379|ref|ZP_03268177.1| OmpA/MotB domain protein [Burkholderia sp. H160] gi|209500193|gb|EEA00251.1| OmpA/MotB domain protein [Burkholderia sp. H160] Length = 217 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 68/169 (40%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +K+++ K + L+G +A R ++ I + Sbjct: 43 ELSSKLEQEVKQRQAETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGNVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S+ PE +L+ + L S +++ + G TD R DNW LS Sbjct: 93 FALNSAQLQPEGRALLKSLAGPLSAYLRASDQILMVSGFTDDQRLREGNRRFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ GV + + F + ++ +P + NRR++I Sbjct: 153 QRALTVTRALIDEGVPASSVFAAA-FGSEQPVSSNADEPGRAKNRRVEI 200 >gi|187925731|ref|YP_001897373.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] gi|187716925|gb|ACD18149.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 584 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 76/285 (26%), Gaps = 26/285 (9%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD---LKIGSTN 119 + P + + + + + + +TK + + + Sbjct: 313 QQPAAAIVPTQDSQFSFTVDAAGKPTLTATVGSEAEKTQLMDELTKRLGQYNFVPNITVD 372 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + + L + + + L + Sbjct: 373 PATKPADWLAHFDSLLPLLSLPGAEVKVAGTHIELSGTAADKKLGWLDKLKSLLGTSYQI 432 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 +A ++ I + L+ + V F Sbjct: 433 GSFDVAHAVADANENFRSAIKNLLAPDSSCAAADVVKVL------------NLQVINFAS 480 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVIS-----IRGHTDASPFRNIARDNWRLSLDRAYS 294 +S+ + L++ VL + G++D + N +LS RA + Sbjct: 481 ASAHVPASAVDDLKQSARVLNACAGNGKTARLEVAGYSDNV---GGEQANLQLSKQRANA 537 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 L+K+GV D + G+ R ++D + NRRI+ + Sbjct: 538 VRAYLVKTGVPADSLLA-QGYGQARPVASNDTASGRFANRRIEFV 581 >gi|227538150|ref|ZP_03968199.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC 33300] gi|227241993|gb|EEI92008.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC 33300] Length = 628 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 N F + LP + L + L + I I GHTD + + N LS +R Sbjct: 522 NNIFFALNKYDLLPSSKSDLNTLVLFLQENPLIRIEIGGHTDNT---GNDQLNKTLSDNR 578 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A + L+ G+S +R+ G+ ++ +D + NRR + + Sbjct: 579 AKAVVTYLIARGISANRLLA-KGYGSNQPLATNDTETGKALNRRTEFKI 626 >gi|150025563|ref|YP_001296389.1| lipoprotein YiaD precursor [Flavobacterium psychrophilum JIP02/86] gi|149772104|emb|CAL43580.1| Probable lipoprotein YiaD precursor [Flavobacterium psychrophilum JIP02/86] Length = 231 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 7/118 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I ++ N FD + S L K+ +V + I I G+TD+ N Sbjct: 104 IRLVLGENAIRFDTNKSTLTASAKANLDKLVKVFTEYPDTDIQIYGYTDS---SGADDYN 160 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 +LS RA S L G++ R + SG ++ + NRR++ + Sbjct: 161 LKLSEQRAASVKTYLSAKGLASTRFNT-SGLGEADPIAPNETADGKSQNRRVEFAITA 217 >gi|293369282|ref|ZP_06615869.1| OmpA family protein [Bacteroides ovatus SD CMC 3f] gi|292635612|gb|EFF54117.1| OmpA family protein [Bacteroides ovatus SD CMC 3f] Length = 256 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 20/217 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDL 195 Q +L RD+ K + + ++N E L L +K + ++R + +L Sbjct: 25 GNQLSAQVKNLLRDTTKMGNSIRQYQSMLNVNMTEQEKLNALLSQKKNELNERERTINEL 84 Query: 196 AKKISST----------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 I + + + + + +++ D+ +F S+ Sbjct: 85 QDMIKAQNDKVQNLLSNVKDALLGFSTDELTVREKDGKVYVAMSDKL---LFQSGSARLD 141 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS- 302 L K+ EVL T++ I GHTD P +DNW LS+ RA S ++L+K+ Sbjct: 142 KRGEEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNY 201 Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 V+ +I + SG + ++ S NRR +I+ Sbjct: 202 NVNPLQI-QPSGRGEYMPVDDNETIEGRSKNRRTEII 237 >gi|224823894|ref|ZP_03697003.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002] gi|224604349|gb|EEG10523.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002] Length = 221 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288 D + FD +L + L + + I GHTD++ N LS Sbjct: 109 DIPSDVSFDSGRYDIKSNMRPILDRFATTLNQNPVTTVKIIGHTDST---GSDAINGPLS 165 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 ++RA + L+ GV+ +RI I G ++ + NRR++I V Sbjct: 166 VNRASATRSYLVARGVAMNRI-SIDGRGSSEPIASNGTAAGRAKNRRVEIFV 216 >gi|218658643|ref|ZP_03514573.1| putative outer membrane porin involved in nitrogen fixation [Rhizobium etli IE4771] Length = 262 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 68/202 (33%), Gaps = 8/202 (3%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 + E+ +L + E P ++ + L Sbjct: 35 NRASDGTFERLANLPPRETPSVLVKVPEPPRESPPVIVAQTPPPPPPPQVKPPSRLDNLL 94 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + L + K V + +L+ I N+ +F S+ + +LQ+IG LA Sbjct: 95 AFLQPEVEKKLVTLSDSNGRLLVRI---SNSGLFATGSAEVSEKFHDLLQRIGGALAAEK 151 Query: 264 EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + G+TD P R I NW LS RA + ++L ++ G A Sbjct: 152 FRAVVVGYTDNVPIRTIQFPSNWHLSEARAKAVGEILASFTGPGAILT--EGRADSDPIA 209 Query: 323 ASDPMNSA--NRRIDILVEDRQ 342 +D NRR +ILV Sbjct: 210 GNDTQEGREMNRRTEILVLTDP 231 >gi|37521397|ref|NP_924774.1| outer membrane protein [Gloeobacter violaceus PCC 7421] gi|35212394|dbj|BAC89769.1| glr1828 [Gloeobacter violaceus PCC 7421] Length = 227 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 20/213 (9%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + +R E +++ E + P E + I+ Sbjct: 24 NPAPTTASRSGEPAVSTQPIGRSLVALDPSEVALMSPTGSETAADSAGGSATRSTQ--IA 81 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 ++ + +V + + T +GI++++ + +FD + P V LQK+ +V+ Sbjct: 82 ASETQVVNQILSDF-NAQRTASGIVVTLPED---ILFDFDKADLRPSAQVALQKMAQVIN 137 Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHH 318 I I GHTD+ + N LS RA + L + V+ R++ G Sbjct: 138 FYKNAPIEISGHTDS---KGADGYNRSLSERRAEAVRSYLANNFSVTTGRLTA-RGLGEG 193 Query: 319 RLKIASD--------PMNSANRRIDILVEDRQG 343 + + NRR++IL++++ G Sbjct: 194 KPVAPNTKPDGSDDPAGRQKNRRVEILIKNQPG 226 >gi|326772523|ref|ZP_08231807.1| hypothetical protein HMPREF0059_00908 [Actinomyces viscosus C505] gi|326637155|gb|EGE38057.1| hypothetical protein HMPREF0059_00908 [Actinomyces viscosus C505] Length = 417 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 17/130 (13%) Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276 G +I++ D +FD SS E L + V+ S I+GHTD+ Sbjct: 293 PVQSCGTVITLEDS---VLFDFGSSELRGEASTTLTNLATVIKDSKAPKVQIQGHTDSV- 348 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMN 328 + N +LS RA + L GV+ D + G+ + ++ Sbjct: 349 --SDDAFNQKLSEQRAQAVSSALKSDGVAAD--LEAVGYGETKPVAPNENPDGSDNPAGR 404 Query: 329 SANRRIDILV 338 NRR+++ V Sbjct: 405 RLNRRVEVFV 414 >gi|239814628|ref|YP_002943538.1| OmpA/MotB domain protein [Variovorax paradoxus S110] gi|239801205|gb|ACS18272.1| OmpA/MotB domain protein [Variovorax paradoxus S110] Length = 217 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + PE L + + + I GHTD+ N RLS+ RA + L+ Sbjct: 116 VLKPEGRAKLTDLVSKIRDVNLEVIIAVGHTDSI---GSDAYNQRLSVRRAEAVKAFLVS 172 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G+ +R+ G + + + NRR++I V + Sbjct: 173 KGIERNRVYT-EGKGEKQPVADNRTKEGRAKNRRVEIEVVGTR 214 >gi|152999646|ref|YP_001365327.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185] gi|217974400|ref|YP_002359151.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223] gi|151364264|gb|ABS07264.1| OmpA/MotB domain protein [Shewanella baltica OS185] gi|217499535|gb|ACK47728.1| OmpA/MotB domain protein [Shewanella baltica OS223] Length = 369 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 8/152 (5%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L I A V + + + F S++ P Sbjct: 213 LDSDNDGIYDDKDQCPATPATHKVDSVGCTIYENVKTKEDVGSIQFANDSAVVKPVFYKD 272 Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRI 309 ++++ L + E I GH N LS RA + ++L+ K G+S+ R+ Sbjct: 273 IERLANYLNKNPEFTVEIAGHASHV---GKPEYNMVLSDKRAAAVAKILVDKYGISQSRV 329 Query: 310 SKISGFAHHRLKIASDPMN--SANRRIDILVE 339 + G+ + +A D +ANRRI+ +V Sbjct: 330 TS-KGYGETQPLVAGDSKEAYAANRRIEAVVT 360 >gi|59713511|ref|YP_206286.1| outer membrane lipoprotein [Vibrio fischeri ES114] gi|197337177|ref|YP_002157921.1| inner membrane lipoprotein YiaD [Vibrio fischeri MJ11] gi|59481759|gb|AAW87398.1| predicted outer membrane lipoprotein [Vibrio fischeri ES114] gi|197314429|gb|ACH63878.1| inner membrane lipoprotein YiaD [Vibrio fischeri MJ11] Length = 222 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 49/143 (34%), Gaps = 9/143 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L + GV E L ++D F SS L + +L Sbjct: 83 DQQEKALRNELKSSGVQVERVGKNELKLVMDNGIG--FQSSSYQLDASIYNTLNGVARIL 140 Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I GHTD+ A N LS RA S L+K V+ R++ G+ Sbjct: 141 VEYPDTALQIDGHTDS---SGNATKNQTLSEQRADSVRTYLIKQDVAAGRVNA-RGYGAR 196 Query: 319 RLKIASDP--MNSANRRIDILVE 339 + + NRR++I + Sbjct: 197 YPVCDNSTKQGRACNRRVEITIL 219 >gi|332521405|ref|ZP_08397859.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332042804|gb|EGI79003.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 646 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 11/140 (7%) Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267 + + + T +++ N FD S P+ L+ I V+ + I Sbjct: 506 EVNAEETQVDLFLTPLIVDSEIVINPIFFDYDKSNIRPDAAYELENIVVVMREHPNMVIK 565 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---- 323 I HTD+ + N +LS RA S L G+++DRI G+ +L Sbjct: 566 IESHTDSR---GRDKYNEKLSDRRAKSTRDYLFSRGIAKDRIESAIGYGESQLLNKCSNG 622 Query: 324 ---SDPMNSANRRIDILVED 340 S+ + NRR ++ Sbjct: 623 VKCSEEEHQKNRRSKFIITS 642 >gi|89902522|ref|YP_524993.1| Type I secretion outer membrane protein TolC [Rhodoferax ferrireducens T118] gi|89347259|gb|ABD71462.1| Type I secretion outer membrane protein, TolC [Rhodoferax ferrireducens T118] Length = 609 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 66/208 (31%), Gaps = 22/208 (10%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + ++ +T +D+ D + + + L PL + + + + K Sbjct: 411 QVAAQARTLAGMGQLVTALGVNREDMPSLQDAGQDRSGIDPAELCPLEESMVDTLDKIKA 470 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 ++ +S+ +FD S E + Sbjct: 471 ------------ETVIPSRARAVAPVVQKPAPTKVSLSADT---LFDSGKSNLKAEGLRS 515 Query: 252 LQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L + + + I GHTD+ N RLSL RA S L+ GV R+ Sbjct: 516 LDSLLARIKGVQLDVVIAVGHTDSV---GSEEFNNRLSLARAESVRAYLVGKGVDVKRVR 572 Query: 311 KISGFAHHRLKIASDPMN--SANRRIDI 336 + G + + + NRR+D+ Sbjct: 573 AV-GKGESQPIADNATEAGHAKNRRVDV 599 >gi|323491313|ref|ZP_08096498.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546] gi|323314439|gb|EGA67518.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546] Length = 222 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 68/217 (31%), Gaps = 14/217 (6%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 L+ + C+ + +++ G+ S I + + + ++ + Sbjct: 7 ALAVAIALSGCQATQRQNATTGETETNSATQGALIGAIAGAAVGLATGDDAKERRKHALI 66 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-------FDKSSSIPL 245 G D + + +G+ + + + + F SS Sbjct: 67 GAAGGAAVGGGVGYYFDQQEAALRKQLLNSGVQVERVGENQLLLRLENGIGFQSSSYQLD 126 Query: 246 PETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 L+ + ++L + + GHTD++ N LS RA S L+ GV Sbjct: 127 SSIHNTLRGVAQILVEYPDTSLVIDGHTDST---GSDTTNQVLSERRAESVRSYLVSQGV 183 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + R G + NRR++I + Sbjct: 184 AAGRAIA-RGNGERYPLCTNSTTEGRACNRRVEIQIL 219 >gi|124004618|ref|ZP_01689462.1| OmpA family protein [Microscilla marina ATCC 23134] gi|123989741|gb|EAY29270.1| OmpA family protein [Microscilla marina ATCC 23134] Length = 247 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 7/176 (3%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 +I ++E + + ++ + + K + + + Sbjct: 74 AITEKEGKEIKRDTVSIVILDDDADGVPNFEDKCPKKKGSYANKGCPENSTPPVLKNSLS 133 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 ++ +F S T L I ++L + + I GHTD+ + N Sbjct: 134 QALAKYTKGLLFPSGSPQINSGTYTQLNAIVKLLKKYPKARLLIEGHTDSV---GNTQKN 190 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 LSL RA ++ G++ R+ + G ++D S NRRI++ + Sbjct: 191 KALSLKRASFVQAYFVRQGIAAHRLK-VIGKGATTPIASNDTAVGRSKNRRIEVRL 245 >gi|88800186|ref|ZP_01115754.1| peptidoglycan-associated lipoprotein [Reinekea sp. MED297] gi|88777032|gb|EAR08239.1| peptidoglycan-associated lipoprotein [Reinekea sp. MED297] Length = 188 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 55/167 (32%), Gaps = 8/167 (4%) Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + + L + LV +++ + E + ++D Sbjct: 25 TDDTDQGSTTTTEPAVEEVDTLELETDDESIELVVEDVEPVAVIEDAAEDVYNELLD-LT 83 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 FD S+ PE I +L E L + + + GH D N L RA Sbjct: 84 LVYFDFDKSVIRPEFIDMLNAHSEFLVANPTQMVVLEGHADER---GTREYNLALGERRA 140 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 LM GVS +I +S + + S NRR++I+ Sbjct: 141 KQVATYLMVQGVSAAQIDTVS-YGEEKPLAIGKTEAEYSQNRRVEIV 186 >gi|171315886|ref|ZP_02905116.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] gi|171098982|gb|EDT43770.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] Length = 220 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F S++ L K+ + + G+TDA+ N LS R Sbjct: 114 GDAYFATDSAVLTSAANAALDKLLNQQGDRHFARVEVDGYTDAT---GSDAHNQALSKRR 170 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 A + L + G+ D +G ++D + NRR++I ++ Sbjct: 171 ADAVAAYLREHGLKADSF-AATGHGEANPAASNDTVEGRARNRRVEISLQK 220 >gi|262193395|ref|YP_003264604.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262076742|gb|ACY12711.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 458 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 69/252 (27%), Gaps = 13/252 (5%) Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 + + ++ + + + + + RD Sbjct: 196 GPGEPAAPRTRRAEPVPYALASEPVDEDDDGVPDFSDACPSEPELYNRMDDEDGCPERDP 255 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + + + + E + + D + T +G ++ Sbjct: 256 DGDGLFGAADECPEEAEDFEGFEDEDGCPDVDNDGDGNPDSADECPNRAETDNGFEDEDG 315 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE-TIVVLQKIGEVLAHSTE-VISIR 269 + I + F S+ + +L + LA + I Sbjct: 316 CPDEVPTRVAEYIGV-----LEGIRFPSGSAKIRDRRSRRILGDVAATLAEYPSVRVRIS 370 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327 GHTD A N +LS +RA + L+ G+ RI G+ R + Sbjct: 371 GHTDDR---GRAEKNVQLSRERADAVKWFLVDKGIEHTRIVTA-GYGPERPLADNGTRAG 426 Query: 328 NSANRRIDILVE 339 + NRRI+ + Sbjct: 427 RAKNRRIEFELL 438 >gi|261856894|ref|YP_003264177.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] gi|261837363|gb|ACX97130.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] Length = 331 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 68/213 (31%), Gaps = 8/213 (3%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + Q H S + + + ++ + Sbjct: 123 WELANQGLQPLHGFAGHIGTSNYAIGAAGMDGVFHELTAHLQRPQGNVDLMLMVIDRDSA 182 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + G V + G+ + F S+ + Sbjct: 183 QGLQAPAVYLKLIEGQPMKTGEVTVTAKAISNGLAQNGHIALYGIHFATDSAALEASSDK 242 Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDR 308 L ++ ++L + I GHTD + N +LS DRA + + L+ + G+S +R Sbjct: 243 ELGEMAKMLKQEPSAHVYIVGHTDDT---GALPHNLKLSRDRADAVVKALITRYGISSNR 299 Query: 309 ISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 + G A ++ D + NRR++I+++ Sbjct: 300 LVA-EGVASFAPVASNASDQGRALNRRVEIVLQ 331 >gi|260061280|ref|YP_003194360.1| OmpA family protein [Robiginitalea biformata HTCC2501] gi|88785412|gb|EAR16581.1| OmpA family protein [Robiginitalea biformata HTCC2501] Length = 832 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 89/286 (31%), Gaps = 19/286 (6%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLS-IDEHITKNS--VDLKIGSTNQKKQYQRL 127 + G + +N + + K D S I + T+ ++G Y Sbjct: 549 DIFQVSFDEEIGFLEVENLGQPINSKKDDFSYIVDEATQKGFFASNRVGGKGDDDLYSFQ 608 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + + + + +T D+ + + + + + + + Sbjct: 609 RLLPEETNENAIAGVVTDLVTGDAIPEALVTLLDANNRKLKEIVTEADGSFVFQDLDSNT 668 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-----QRNTPMFDKSSS 242 R + L + A DN V + I + D + F+ Sbjct: 669 RYRILVEKATYSEQQEEVATRDNEQVDVELPMRKLQERIVVEDGVRKLKTGPIYFNFDKH 728 Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + L K+ V+ ++ I HTD+ + N LS RA S L++ Sbjct: 729 NIRSDAAEELDKLVAVMQEYPSMVIAIESHTDSR---GSSVYNRYLSDLRAKSTRAYLIE 785 Query: 302 SGVSEDRISKISGFAHHRLKIASD-------PMNSANRRIDILVED 340 +G+ RI G+ RL D + NRR + +V D Sbjct: 786 NGIDPSRIQSAKGYGEDRLLNDCDGSVRCTSQQHQLNRRSEFIVVD 831 >gi|307824145|ref|ZP_07654372.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] gi|307734929|gb|EFO05779.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] Length = 396 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 6/107 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S P+ L V+ + I ++GHT ++ N RLS RA + Sbjct: 293 FDNDKSNIKPQYYRELDNAVTVINQNPGVNIEVQGHTSST---GTVEYNQRLSERRALAV 349 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L R G+ + ++ NRR+ + V Sbjct: 350 KNYLSSKSAHAGRTLTARGYGLTQPIDTNETEEGRANNRRVQLEVLQ 396 >gi|289678953|ref|ZP_06499843.1| flagellar motor protein MotD [Pseudomonas syringae pv. syringae FF5] Length = 234 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 57/181 (31%), Gaps = 5/181 (2%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 ++ + + E+ + E+ A + L Sbjct: 57 NDTERTMKPIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLI 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + I I + +F ++P + +++K+ ++ I + G Sbjct: 117 KSDQMTVRGNELWIEIELNSSM---LFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEG 173 Query: 271 HTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 TD P NW LS R+ S ++L GV+ R++ + G+ + + + Sbjct: 174 FTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASV-GYGEFQPIVPNTSTAG 232 Query: 330 A 330 Sbjct: 233 R 233 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 30/232 (12%), Positives = 73/232 (31%), Gaps = 10/232 (4%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +++ + + W + YADF+T+L AFF+VM+ I++ ++ K + Q + Sbjct: 1 MARRRQVEEHENH--ERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFND 58 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 K P Q + + E + K+S G + + Sbjct: 59 TERTMK-------PIPIGEQRPVSVKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDA 111 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + ++ + + S+ L S + + + ++ +KR + Sbjct: 112 FGDLIKSDQMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHV 171 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK-SSSIPLP 246 + + + + + +D N P Sbjct: 172 EGFTDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQP 223 >gi|78221995|ref|YP_383742.1| OmpA/MotB [Geobacter metallireducens GS-15] gi|78193250|gb|ABB31017.1| OmpA/MotB [Geobacter metallireducens GS-15] Length = 457 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 76/240 (31%), Gaps = 12/240 (5%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 T ++ I + + QY+ + + D D ++ Sbjct: 217 TDLKIEFDIDKADIRPQYKDEVKRVADYMKQYPNTTAVIEGYTDDVGSDDYNMKLSQRRA 276 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + L+ K + Q L + I + ++ Sbjct: 277 EAVVNSLVDDFGIDRSRLSAKGYGKTQPLTSNATEAGKQ-KNRRIQAVIDCTLEDPKVIA 335 Query: 227 SIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282 + D+ + FD P+ + K+GE + + ++ GHTD Sbjct: 336 KLPDRLCVSLNIQFDTDKYTIKPQYHDEIAKVGEFMKQNPTTTAVIEGHTDRV---GSYD 392 Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 N +LSL RA S L G+ R+S G+ + R + + NRRI+ +++ Sbjct: 393 YNMKLSLRRAESVVTYLADKFGIERSRLSA-KGYGYTRPIGYNSDPKGRAMNRRINAIID 451 >gi|319794434|ref|YP_004156074.1| ompa/motb domain protein [Variovorax paradoxus EPS] gi|315596897|gb|ADU37963.1| OmpA/MotB domain protein [Variovorax paradoxus EPS] Length = 331 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 7/105 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD + PE+ L ++ +++ ++ +S+ GHTDA A+ N LS RA + Sbjct: 229 LFDLDKDVIRPESQPTLDEMTKLMRNNPPLKLSVVGHTDAQ---GEAKHNDDLSKRRAVA 285 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDIL 337 VL+K+GV R + G +D + NRR++++ Sbjct: 286 VIGVLVKAGVDPRRFTT-RGAGAAEPVAPNDNEAGRAKNRRVELV 329 >gi|150007641|ref|YP_001302384.1| outer membrane lipoprotein [Parabacteroides distasonis ATCC 8503] gi|149936065|gb|ABR42762.1| outer membrane protein, putative OmpA domain protein [Parabacteroides distasonis ATCC 8503] Length = 445 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S PE++ + +I +++ + + S+ GHTD++ N LS R+ + Sbjct: 344 FDVGKSTIKPESMGEINRIVKLMTDNPDLRFSVEGHTDST---GNEASNQTLSEARSNAI 400 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 L++ G+S DR+S SG + D + NRR++ + Sbjct: 401 VGKLVELGISADRLSA-SGKGQSSPIADNGTDEGRAKNRRVEFV 443 >gi|119504265|ref|ZP_01626345.1| peptidoglycan-associated lipoprotein [marine gamma proteobacterium HTCC2080] gi|119459773|gb|EAW40868.1| peptidoglycan-associated lipoprotein [marine gamma proteobacterium HTCC2080] Length = 182 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD SS + + VL + + + + GHTD N L RA + Sbjct: 84 FDFDSSSMTDTARMAVDAHIAVLLSNDDSVRLEGHTDER---GTREYNLALGERRANAVR 140 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 ++ +GV RI IS + +S+ S NRR+++ Sbjct: 141 DYMVANGVPSYRIESIS-YGEENPVAFGSSEANWSQNRRVEL 181 >gi|116694470|ref|YP_728681.1| hypothetical protein H16_B0519 [Ralstonia eutropha H16] gi|113528969|emb|CAJ95316.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 215 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 24/177 (13%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + L E + +R + L K +++ L+ + + Sbjct: 39 GVQMELSARLEAEVKQRQEEAQRRETLEKALAAPLAAGRVTLVNGRIGI----------- 87 Query: 229 IDQRNTPMFDKSSSIPLPETIVVL----QKIGEVLAHSTEVISIRGHTDASPFRN---IA 281 +F +S PE +L Q + L E++ + G TD R Sbjct: 88 ---SGNVLFALNSDQLQPEGRDLLKSLAQPLSAYLRSRDEILMVSGFTDDQQVREGNRRF 144 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 DNW LS RA + + L+ +G+ + + F + + + NRR++I Sbjct: 145 ADNWELSAQRALTVTRTLIDAGIPPTSVFSAA-FGSQQPVTPNADAEGRAKNRRVEI 200 >gi|256422985|ref|YP_003123638.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] gi|256037893|gb|ACU61437.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] Length = 1026 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + + ++ L K+ +L E + GHTD N LS R+ + Sbjct: 920 FASAKAEIAVSSLPSLDKMAALLQAHREWQLLLSGHTDNE---GTETFNQTLSEKRSEAV 976 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 Q L+ GV +RI+ G+ + + NRR+++ + Sbjct: 977 RQYLVTKGVDAERITT-KGYGQSKPLTTNSSEAGRGKNRRVEMEI 1020 >gi|256820420|ref|YP_003141699.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256582003|gb|ACU93138.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271] Length = 290 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 9/156 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 R + + +L G++ + + V + + + I+I D+ +F S Sbjct: 117 RRDSINLALVQSLKGVLGNLDDQDVDIKVEKGVVFINISDKM---LFSSGSYTISKNAKS 173 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSED 307 VL+K+ +V+ + + + GHTD + RDNW LS+ RA +VL K GV+ + Sbjct: 174 VLEKVAKVVKNKPDFEFMVEGHTDNVNIKTSCIRDNWDLSVMRATEIVRVLQKDFGVAPE 233 Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 R++ G +++ ++ + NRR I++ + Sbjct: 234 RMTAA-GRSYYVPLASNGDANGRALNRRTRIVILPK 268 >gi|146298022|ref|YP_001192613.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146152440|gb|ABQ03294.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 231 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 7/118 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I + N+ FD + S P L K+ V + I I G+TD + N Sbjct: 104 IHLTLNENSVRFDTNKSTLTPTAKANLDKLVPVFNEYGDTDIQIFGYTDNT---GKPEYN 160 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 LS RA S L+ G+ R SG +D + NRR++ + Sbjct: 161 LTLSGQRAASVQAYLVSKGLKSSRFKT-SGLGIADPIATNDTPEGRAQNRRVEFSITA 217 >gi|255013830|ref|ZP_05285956.1| outer membrane lipoprotein [Bacteroides sp. 2_1_7] Length = 435 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S PE++ + +I +++ + + S+ GHTD++ N LS R+ + Sbjct: 334 FDVGKSTIKPESMGEINRIVKLMTDNPDLRFSVEGHTDST---GNEASNQTLSEARSNAI 390 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 L++ G+S DR+S SG + D + NRR++ + Sbjct: 391 VGKLVELGISADRLSA-SGKGQSSPIADNGTDEGRAKNRRVEFV 433 >gi|332880160|ref|ZP_08447842.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681919|gb|EGJ54834.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 242 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 9/120 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARD-----N 284 + +F+ SSS L K + + + + + G+TD ++N N Sbjct: 111 DSGILFNTSSSALSSNATASLAKFASTVLNVNKDMDVAIKGYTDNQGWKNSTAAQSVQKN 170 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 LSL RA S L + GVS +I+ + G + NRR+++ + + Sbjct: 171 MDLSLQRANSVSNYLKQCGVSPTQITSVEGLGEADPVADNSTAAGREQNRRVEVYLYASE 230 >gi|171322789|ref|ZP_02911520.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] gi|171091861|gb|EDT37347.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] Length = 230 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + P L ++ +++ G+TD+ N LS RA + Sbjct: 125 FDTDRADLTPIARDRLDRLISASRGVRVRTVTVNGYTDSV---GSDDYNVGLSERRASAV 181 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 L G+S R G+ +++ + NRR+++ ++ + Sbjct: 182 DAYLQSHGLSAGRFV-GRGYGKADPVDSNETAVGRARNRRVEVRLDVDR 229 >gi|319426588|gb|ADV54662.1| OmpA/MotB domain protein [Shewanella putrefaciens 200] Length = 288 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 75/255 (29%), Gaps = 19/255 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 S + + D++ + + + +S ++++ ++ + + L Sbjct: 32 SSAPKMAEGISDIRTELNTLQAKNELAILAPAAISQAEEAVRAAEQPVKNEQLSQHLVFV 91 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 D + +I + ++K+LA R D ++ Sbjct: 92 ADRKVNIALAQAQSRFAEDQQKVLAKNRDDARLDARTTEANQAHQDARLARADAADARQE 151 Query: 221 RTGILISII------------DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267 + +FD + T L + L + Sbjct: 152 SDDAQAQLALLNARESERGWVVTLGDVLFDTGKANLKSSTSQHLTNLATFLGKYPQRGAI 211 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 I G+TD+ N LS RA S L GV R+S G ++ Sbjct: 212 IEGYTDSV---GTEEYNLGLSERRADSVSNFLQAQGVQSSRLSS-QGKGESFPVANNESA 267 Query: 328 --NSANRRIDILVED 340 NRR+++++ + Sbjct: 268 SGRQQNRRVEVIITN 282 >gi|300694450|ref|YP_003750423.1| transmembrane protein, ompa/motb motif [Ralstonia solanacearum PSI07] gi|299076487|emb|CBJ35807.1| putative transmembrane protein, OmpA/MotB motif [Ralstonia solanacearum PSI07] Length = 215 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 20/173 (11%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 LS + +K+++ K + L+G +A R ++ I Sbjct: 39 AVQLELSSKLADEVKQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGIS 88 Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNW 285 + +F +S PE +L+ + L E++ + G D DNW Sbjct: 89 GSVLFALNSDQLQPEGRELLKSLAGPLSAYLKSRDEILMVSGFADDQQVHAGNRRFADNW 148 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 LS RA + + L+ +G+ + + F + ++ D + NRR++I Sbjct: 149 ELSAKRALTVTRALIDAGIPGASVFAAA-FGSEQPVSSNTDDEGRAKNRRVEI 200 >gi|254516702|ref|ZP_05128761.1| OmpA/MotB [gamma proteobacterium NOR5-3] gi|219675125|gb|EED31492.1| OmpA/MotB [gamma proteobacterium NOR5-3] Length = 177 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS P + +L + + + GHTD N L RA + Sbjct: 79 FEFDSSTLTPAAQAAVDAHIALLKTNDRSVRLDGHTDER---GTRDYNMALGERRANAVR 135 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 ++ +GV+ RI +S + + + + S NRR+++ Sbjct: 136 DYMVVNGVASYRIETVS-YGEEQPVAYGSGESSWSQNRRVEL 176 >gi|332715427|ref|YP_004442893.1| OmpA-like porin [Agrobacterium sp. H13-3] gi|325062112|gb|ADY65802.1| OmpA-like porin [Agrobacterium sp. H13-3] Length = 503 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 8/144 (5%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + ++ L + K V + + I N+ +F S+ P+ ++Q+IG Sbjct: 335 LEKLMAFLQPEVDRKLVTLADVNGRLRVRIN---NSGLFTTGSADVSPQFRDLIQRIGGA 391 Query: 259 LAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 LA + G+TD P + + NW LS RA + +L + E ++ G A Sbjct: 392 LAAEKFRAVVIGYTDTVPIKTVEFPSNWHLSEARAKAVGDILSQFTGPEAILT--EGRAD 449 Query: 318 HRLKIASDPMNSA--NRRIDILVE 339 + NRR +I+V Sbjct: 450 SDPIADNKTEEGRQINRRTEIMVL 473 >gi|288801213|ref|ZP_06406668.1| lipoprotein PG3 [Prevotella sp. oral taxon 299 str. F0039] gi|288331824|gb|EFC70307.1| lipoprotein PG3 [Prevotella sp. oral taxon 299 str. F0039] Length = 225 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 55/150 (36%), Gaps = 9/150 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K++ + V ++ V + ++ + +F + ++ + L K Sbjct: 70 MDKVAQETAAKVKSAKIEEVTDANGLKAVKVTF---DSGILFSTNKAVLSQTSKNDLAKF 126 Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 +L + + + I GHTD++ N LS RA S L GV+ + + G Sbjct: 127 ATILKENRDCHVDIYGHTDST---GNDGINIPLSNSRARSVVNYLESCGVTGSQFKNVQG 183 Query: 315 FAHHRLKIASDPM--NSANRRIDILVEDRQ 342 ++ NRR+++ + Q Sbjct: 184 KGSSEPVASNSTASGRQQNRRVEVYLYASQ 213 >gi|325983492|ref|YP_004295894.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212] gi|325533011|gb|ADZ27732.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212] Length = 227 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 11/150 (7%) Query: 197 KKISSTLSGLVADNIVKGVLFET-TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +++ + GV + ++I FD + P +L Sbjct: 73 QRMEEQKREMETATAGTGVQVTQTEDNRLKLNIPSD---ISFDTGRADIKPGFRPILDNF 129 Query: 256 GEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + + I GHTD++ N LS++RA S L+ GVS RI +I G Sbjct: 130 ATTLISNEGTAVKIIGHTDST---GSDAINNPLSVNRAASTRDYLVSRGVSIKRI-QIDG 185 Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDRQ 342 +D + NRR++I V + Q Sbjct: 186 RGSREPMAENDTPENRAENRRVEIFVTETQ 215 >gi|27804808|gb|AAO22853.1| outer membrane protein A-like protein [Myxococcus xanthus] Length = 241 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 72/227 (31%), Gaps = 8/227 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 Q S ++ + TD + N ++ Sbjct: 10 GPAARQGCPIPDQDGDEVPDEIDSCPSDPGPADNRGCPVRDTDGDGIDNDKDECPNEAGP 69 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 E+ + + + S ++ + L I + F+ Sbjct: 70 IERNGCPESDTDKDGVPNRADSCVNEPGDAKNLGCPLHILPLVEIRPDRLVVMGKVFFEP 129 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + + + +L + V+ E+ + + HTD DN RLS RA + Q Sbjct: 130 TQARIQKRSYELLDWVARVIREHPEIPLVVVGAHTDDR---GFPDDNRRLSQGRAEAVRQ 186 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L+ ++ +R+ + G+ R ++ N NRR++ L+ D Q Sbjct: 187 YLIGRDIAPERLKAL-GYGQERPIDSNATSNGRENNRRVEFLLADPQ 232 >gi|332519368|ref|ZP_08395835.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332045216|gb|EGI81409.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 370 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 7/113 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F+ +I + +I L K+ L + I I GHTD +A+ N LSL R Sbjct: 262 KNILFEFDKAILVNTSIEELDKLNLHLKENKNLNIEIYGHTDNI---GLAKRNQELSLQR 318 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 A S + L+ G+ ++RI GF + + + + NRR++ + D+ Sbjct: 319 AKSVSEYLISKGLKKERIQWF-GFGSSKPLVKNSSEDNRAKNRRVEFKLIDKN 370 >gi|86750700|ref|YP_487196.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] gi|86573728|gb|ABD08285.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] Length = 451 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + S+ ++ VL+++ EV+AH I + GHTDA N LS RA + Sbjct: 350 FMRGSAEIAQASLPVLKQLAEVIAHCPAATIEVAGHTDA---AGKKAANEALSKRRAEAV 406 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 L K+G+ +++ + G+ + A+D + NRRI+ +V+ Sbjct: 407 ADNLTKAGIGSAKLTAV-GYGASKPLAANDSADGRAKNRRIEFVVK 451 >gi|120599047|ref|YP_963621.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1] gi|146292882|ref|YP_001183306.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32] gi|120559140|gb|ABM25067.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1] gi|145564572|gb|ABP75507.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32] Length = 288 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 74/255 (29%), Gaps = 19/255 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 S + + D++ + + +S ++++ ++ + + L Sbjct: 32 SSAPKMAEGISDIRTELNTLQANNELAILAPAAISQAEEAVRAAEQPVKNEQLSQHLVFV 91 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 D + +I + ++K+LA R D ++ Sbjct: 92 ADRKVNIALAQAQSRFAEDQQKVLAKNRDDARLDARTTEANQAHQDARLARADAADARQE 151 Query: 221 RTGILISII------------DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267 + +FD + T L + L + Sbjct: 152 SDDAQAQLALLNARESERGWVVTLGDVLFDTGKANLKSSTSQHLTNLAAFLGKYPQRGAI 211 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 I G+TD+ N LS RA S L GV R+S G ++ Sbjct: 212 IEGYTDSV---GTEEYNLGLSERRADSVSNFLQAQGVQSSRLSS-QGKGESFPVANNESA 267 Query: 328 --NSANRRIDILVED 340 NRR+++++ + Sbjct: 268 SGRQQNRRVEVIITN 282 >gi|283853198|ref|ZP_06370451.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B] gi|283571456|gb|EFC19463.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B] Length = 245 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 9/200 (4%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + + S+ + + + + +S A +++ + + + + S Sbjct: 46 DVKKFSDSFDSVQNALGSKGKSKQAAPVSGQEMSALVEQARIKQRIIGEQRRVFENFRSF 105 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + + I IS+ +F K E V L+ + E L + E Sbjct: 106 VSQKGLEGVLGATLESGTITISL---PTGVLFPKDGVDLTDEGKVRLRTLHEFLIKTAGE 162 Query: 265 VISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I+IRG TD P + RDNW +S RA + + ++ G++ +R++ +G A Sbjct: 163 RINIRGFTDDLPPAAGSRFRDNWEVSSLRAVAVLRYMLSLGMAPNRLTA-TGLADLEPLY 221 Query: 323 ASDPM--NSANRRIDILVED 340 + + N+R++ ++E Sbjct: 222 PNTTPEHRARNQRVEFVLER 241 Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 3/58 (5%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 D W AD +LM FF++++ ++ D F+ L + K Sbjct: 13 DEAEAPSEWLTTLADMSMLLMTFFILLFSMSTLDVKKF---SDSFDSVQNALGSKGKS 67 >gi|91787475|ref|YP_548427.1| OmpA/MotB [Polaromonas sp. JS666] gi|91696700|gb|ABE43529.1| OmpA/MotB [Polaromonas sp. JS666] Length = 227 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288 D + FD + P +L + L + ++I GHTD++ N LS Sbjct: 113 DIPSDVSFDVGRAAIKPNFAPILNQFATSLNQNQVTTVTIIGHTDST---GSDAINNPLS 169 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 +DRA +A L+ GV+ RI G ++ NRR++I V Sbjct: 170 VDRANAARDYLVSRGVARTRI-ATDGRGSREPVADNNTQQGRDKNRRVEIYV 220 >gi|213961761|ref|ZP_03390027.1| OmpA family protein [Capnocytophaga sputigena Capno] gi|213955550|gb|EEB66866.1| OmpA family protein [Capnocytophaga sputigena Capno] Length = 290 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 9/156 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 R + + +L G++ + + V + + + I+I D+ +F S Sbjct: 117 RRDSVNLALVQSLKGVLGNLDDQDVDVKVEKGVVFINISDKM---LFSSGSYTISKNAKS 173 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKS-GVSED 307 VL+K+ +V+ + + + GHTD + RDNW LS+ RA +VL K GV+ + Sbjct: 174 VLEKVAKVVKNKPDFEFMVEGHTDNVNIKTGCIRDNWDLSVMRATEIVRVLQKDFGVAPE 233 Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 R++ G +++ ++ + NRR I+V + Sbjct: 234 RMTAA-GRSYYVPLASNGDANGRALNRRTRIVVLPK 268 >gi|330959642|gb|EGH59902.1| hypothetical protein PMA4326_13904 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 220 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 13/155 (8%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + + K+ L D + + + D F S+ P Sbjct: 76 MDKRSAKLKEELRQKGMDATTSLDPVTGRQMMTVQAPSD----IAFATGSADLQPAAFQG 131 Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L + L + +++I GHTD++ + N LS RA + Q L +GV ++ Sbjct: 132 LSAVANALKDQKDLMLNITGHTDST---GSRQFNNLLSYARAQAVAQYLYAAGVPA-QVI 187 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 + G + NRR++I + +QG Sbjct: 188 AVRGVGPSMPVATDATSQGRAQNRRVEIQI--KQG 220 >gi|260768688|ref|ZP_05877622.1| outer membrane protein [Vibrio furnissii CIP 102972] gi|260616718|gb|EEX41903.1| outer membrane protein [Vibrio furnissii CIP 102972] Length = 229 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 64/208 (30%), Gaps = 9/208 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + +Q+ +S L + + + I A Sbjct: 25 AATQRQNATTGETETNSATKGALLGALAGAAVGLASGDDAKERRQRALIGAAGGAAVGGG 84 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + L + + GV E L+ + +N F +S L+ Sbjct: 85 VGYYFDQQEAALRQELLNSGVQVERVGENQLVLRM--QNGIGFQTNSYQLDSSIHNTLRG 142 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + ++L + + GHTD++ N LS RA S L+ GV+ R Sbjct: 143 VAKILVEYPDTSLVIDGHTDST---GSDTTNQILSERRAESVRSFLLSQGVAAGRAIA-R 198 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339 G + + NRR++I + Sbjct: 199 GNGERYPLCTNSTADGRSCNRRVEIQIL 226 >gi|37528060|ref|NP_931405.1| hypothetical protein plu4224 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787497|emb|CAE16596.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 558 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +FD S PE VL + E + + GHTD++ A N LSL R Sbjct: 439 SMSLFDVGQSRLKPEAAKVLVNALIEIKAKPEWMVVITGHTDST---GDAVKNRELSLAR 495 Query: 292 AYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A + L S VS + G + + + NRR++I + Sbjct: 496 AKAVRDWILQTSDVSPTCFV-VKGEGATQPIATNTTAVGRAVNRRVEISLMPP 547 >gi|2062640|gb|AAC35418.1| CadF precursor [Campylobacter coli] Length = 326 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F P +++I ++L + +I GHTD N +LS RA S Sbjct: 223 FGFDKVDINPAFEEKIKEIAQLLDENARYDTILEGHTDNI---GSRAYNQKLSERRAESV 279 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 + L K GV +DRI + G+ + + ++ NRR+D Sbjct: 280 AKELEKFGVDKDRIQTV-GYGQDKPRSRNETKEGRADNRRVD 320 >gi|90414007|ref|ZP_01221991.1| hypothetical outer membrane protein OmpA [Photobacterium profundum 3TCK] gi|90324929|gb|EAS41450.1| hypothetical outer membrane protein OmpA [Photobacterium profundum 3TCK] Length = 327 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S + I LQ I + L + E + + GHTD+ N LS +RA Sbjct: 218 FAFDSDTLSQQDIDQLQPIAQRLVNFPETELFVIGHTDSR---GAEAYNQNLSEERAAVV 274 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L G+ + RI G A+D + NRR+++ Sbjct: 275 AGYLATHFGIEQSRIQA-QGRGELEPVAANDTEDGRAQNRRVEVF 318 >gi|320536711|ref|ZP_08036721.1| OmpA family protein [Treponema phagedenis F0421] gi|320146448|gb|EFW38054.1| OmpA family protein [Treponema phagedenis F0421] Length = 412 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 10/168 (5%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ E + + + + ++ L+ + + ++ T GI ISI Sbjct: 252 TLTYEGTASAEITETKKLDKAAVAEDLTQKIEELGIENTTISQTDEGITISI----ENIQ 307 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ L LQKIG +L + + I GHT R A + +LS +RA S Sbjct: 308 FEADSARLLSSEKEKLQKIGRLLQGFPDKELLISGHT---ALRGTAAERQKLSEERADSV 364 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 + L + G+ + + GF R ++ + NRR++I + ++ Sbjct: 365 ARYLEEIGIRDTQHLYTRGFGARRPLAPNTNEENRARNRRVEITILEK 412 >gi|325272915|ref|ZP_08139241.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51] gi|324101950|gb|EGB99470.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51] Length = 145 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290 F S+ P L + + I + G TD++ + N LS Sbjct: 21 PGNITFATDSANIAPSFYQPLNNLASSFKQFNQNTIEVVGFTDST---GSRQHNMDLSQR 77 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 RA + L GV R+ + G + ++ + NRR+++ ++ Sbjct: 78 RAQAVSTYLTSQGVDSSRL-SVRGMGPDQPIASNADANGRAQNRRVEVNLK 127 >gi|255531961|ref|YP_003092333.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366] gi|255344945|gb|ACU04271.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366] Length = 631 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F+ + LP ++ L + ++L ++ I I+GHTD + N RLSL R Sbjct: 524 KNIFFNTNEYTLLPASLTELNTLQQLLKNNASLCIEIQGHTDNV---GNDQQNERLSLQR 580 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 A + Y L++ + R+ G+ ++ A+D NRR ++ Sbjct: 581 AKAVYDYLVQEKIEPQRL-TFKGYGENKPIAANDTDAHRRQNRRTSFIITK 630 >gi|309789304|ref|ZP_07683895.1| chemotaxis motB domain protein [Shigella dysenteriae 1617] gi|308922839|gb|EFP68355.1| chemotaxis motB domain protein [Shigella dysenteriae 1617] Length = 137 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 2/109 (1%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAY 293 MF S+ P +L+ I VL IS+ GHTD P+ + NW LS DRA Sbjct: 1 MFKTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRAN 60 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ + LM G+ ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 61 ASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQ 109 >gi|32265934|ref|NP_859966.1| hypothetical protein HH0435 [Helicobacter hepaticus ATCC 51449] gi|4809140|gb|AAD30109.1|AF134212_1 membrane-associated protein map18 [Helicobacter hepaticus] gi|32261983|gb|AAP77032.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 153 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 6/106 (5%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD + ++K L + + + GHTD+ N+ L RA + Sbjct: 50 VLFDFDKYDIRSDMEDRVEKSAAALKSTGAKVVLEGHTDSY---GSDAYNYALGTKRANA 106 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L GV+ +I +S + + SD NRR++ + Sbjct: 107 VKNALTTRGVNASQIKTVS-YGESKPTCTSDTPECNQENRRVEFKL 151 >gi|317051743|ref|YP_004112859.1| peptidoglycan-associated lipoprotein [Desulfurispirillum indicum S5] gi|316946827|gb|ADU66303.1| peptidoglycan-associated lipoprotein [Desulfurispirillum indicum S5] Length = 187 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S P+ VL L ++ + GH D + N L RA S Sbjct: 85 FDFDRSSIRPDARKVLDNNIAYLKNNPNARIVIEGHCDER---GSSDYNLALGDRRAQSV 141 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 L+ G+ R++ IS + R ++ NRR + + Sbjct: 142 KDYLVTGGIDASRLTTIS-YGKERPVDPRSNEWAWQKNRRGEFV 184 >gi|170703211|ref|ZP_02894016.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|170131877|gb|EDT00400.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] Length = 214 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + A++ +++ K + L+G +A R ++ I + Sbjct: 42 QLTSKLEEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGAVL 91 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S PE +L+ + L E++ + G D R DNW LS Sbjct: 92 FALNSDQLQPEGRDLLKTLAGPLAAYLKTRDEILMVSGFADDQQVRAGNRKFADNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +GV + + F + ++ D + NRR++I Sbjct: 152 KRALTVTRALIDAGVPARSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199 >gi|86609769|ref|YP_478531.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558311|gb|ABD03268.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 243 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 78/232 (33%), Gaps = 13/232 (5%) Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 + Q I Q+ S T D++ ++ TDLE I + + Sbjct: 14 ETNISPTQPASPTPPILPTLAPPQANPPVASPTADADPEENHESPTDLEAEIREIRQQVI 73 Query: 176 PPLSKEKILAMKRK----KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 L + + L + + + + ++ S+ + + T + I Sbjct: 74 QLLIRIEELESRLQRLRSQTAPEPVRESSTAAEIVPGEESTPAPTKTLTSFQVGTQTISL 133 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 +FD + PE +L ++ + L + + GHTD N LSL Sbjct: 134 PGDLLFDFDKAEIRPEAASLLAQVAKSLEAMPGARVQVNGHTDNI---GPLNYNLALSLR 190 Query: 291 RAYSAYQVLMKSGVSEDRISK--ISGFAHHRLKIASDPM--NSANRRIDILV 338 RA + L K + E SGF +D NRR+D+++ Sbjct: 191 RANAVKDYLTKL-LPEGHPISWTTSGFGPTLPVADNDTEAGRQRNRRVDLVI 241 >gi|146276274|ref|YP_001166433.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145554515|gb|ABP69128.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 642 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 41/127 (32%), Gaps = 7/127 (5%) Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR 278 I + F+ S+ P L + EV + + I GHTD+ Sbjct: 482 QECMTRIRRVLAGQKITFEPGSAEIDPSARGTLDGLAEVFKDCKGMPLEISGHTDSQ--- 538 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 N LS RA + L V R+ + G+ R + NRRI+ Sbjct: 539 GSEGGNKALSQARAEAVLMALQGRRVDVGRMKAV-GYGEERPIADNRDEAGREANRRIEF 597 Query: 337 LVEDRQG 343 + G Sbjct: 598 TLLGDDG 604 >gi|86141296|ref|ZP_01059842.1| OmpA family protein [Leeuwenhoekiella blandensis MED217] gi|85831855|gb|EAQ50310.1| OmpA family protein [Leeuwenhoekiella blandensis MED217] Length = 640 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 93/287 (32%), Gaps = 19/287 (6%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + NL D+ E NK S D K D+ + N K Sbjct: 363 FKDGIYGTPINLGPVMNTNSDDFAYLEGDEPNKGFFSSDRPGGKGGDDIYAFNYNLAKCV 422 Query: 125 QRLENNIFYLSNSQQSEHCKNSL-TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 Q + ++ L + + K ++ D ++ + D S+ +++ Sbjct: 423 QYISGTVYDLETKEPIKGAKVTVFDEDGKEYARIETGDDGSYSVELLCESTYTIEARKAG 482 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + D+ + ++ + + + I I + F+ Sbjct: 483 YSEDQLDFETDVLPDRKMNMVDFRLKDLSEIFVTDGDIEKIRI------DPIYFEYYRYN 536 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + L+++ EV+ E+I I HTD N LS +RA S L+++ Sbjct: 537 ITDVAAIQLRRVIEVMDAYPEMIIKIESHTDQR---GTDYFNKTLSTNRANSTKDWLIEN 593 Query: 303 GVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 G+ RI G+ + D S NRR + +V R Sbjct: 594 GIDPSRIQSAIGYGESQPINICDEEGKTCTELEYSENRRSEFIVVSR 640 >gi|319788654|ref|YP_004148129.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1] gi|317467166|gb|ADV28898.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1] Length = 348 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + LPE+ + ++ E+L + + + GHTD + A N RLS R+ + Sbjct: 247 FATDRTEILPESQPQIDQVVELLQQDPQLNLGVEGHTDDT---GDAGHNLRLSEGRSNAV 303 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + L+ G+ R++ GF R + + NRR++++ Sbjct: 304 VKALVARGIDAARLTSA-GFGSTRPVADNGSEEGKARNRRVELV 346 >gi|107025501|ref|YP_623012.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116693317|ref|YP_838850.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia HI2424] gi|170737407|ref|YP_001778667.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia MC0-3] gi|105894875|gb|ABF78039.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116651317|gb|ABK11957.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424] gi|169819595|gb|ACA94177.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3] Length = 221 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 7/118 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 +I ++ +F + P L ++ A T +++ G TD+ Sbjct: 107 VIERVNLSGDALFATDHATLAPTARESLDRLLSERADRTYSQVTVTGFTDSV---GSDDY 163 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 N LS RA S L G+ D I +SG ++ NRR++I ++ Sbjct: 164 NLALSKRRAESVAAYLKAHGLKTDSI-TVSGRGKADPVASNATPEGRASNRRVEIRLQ 220 >gi|323700140|ref|ZP_08112052.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132] gi|323460072|gb|EGB15937.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132] Length = 273 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 17/154 (11%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L L +N+ + + F ++R + I+ + +F PE L + +L Sbjct: 86 EPLQSLKWENVSQDINFSSSRF---VQILSINASLLFGPDGYTLSPEGRATLDRFLPLLE 142 Query: 261 HSTEVISIRGHTDASPF-------RNIARDN----WRLSLDRAYSAYQVLMKSGVSEDRI 309 + + GHT N W+LSL+R + Y+ L+ G+S D + Sbjct: 143 QVKYPLLLAGHTSDLRDELGMNYQPGDDSRNPDLSWKLSLNRTLAIYRYLLDKGMSPD-M 201 Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 ++ GF +R D + NRR+DI+++ R Sbjct: 202 LRVEGFGKYRPHYPPDTPENRARNRRVDIVLDKR 235 Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 2/89 (2%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + W + +AD MT+++ FF+++ + D K Sbjct: 3 KKKQKRNCEEMPLWMVTFADCMTLMLTFFILLVSMATIDQRRKLVALGSIIGTFGFNQAG 62 Query: 80 --SKGIFDEQNPPERSSQNKIDLSIDEHI 106 + D + E + DL + + Sbjct: 63 YDTFSQKDTKKTVEPGPIDTGDLEPLQSL 91 >gi|153949077|ref|YP_001403078.1| outer membrane lipoprotein [Yersinia pseudotuberculosis IP 31758] gi|152960572|gb|ABS48033.1| OmpA family protein [Yersinia pseudotuberculosis IP 31758] Length = 219 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD +SS P L + Sbjct: 80 YMDVQEAKLREKMSGTGVSVTRQGENIVLNM---PNNVTFDTNSSNLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N LS RA + L+ GV+ +RI + G Sbjct: 137 VLKEYDKTAVNVTGYTDST---GARAHNIVLSQQRADNVASALIVQGVAANRI-RTYGAG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PDNPVASNSTAAGKAQNRRVEITL 216 >gi|329888485|ref|ZP_08267083.1| inner membrane lipoprotein yiaD [Brevundimonas diminuta ATCC 11568] gi|328847041|gb|EGF96603.1| inner membrane lipoprotein yiaD [Brevundimonas diminuta ATCC 11568] Length = 224 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 10/146 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A+ GV +++ + F + S P + VL + Sbjct: 82 QYMDGQQRALEAELSGTGVGVARQGDNLVLRMPSDVT---FATNQSDLDPRFLPVLDDVA 138 Query: 257 EVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL ++ + GHTD+ N LS RA S L+ GV +RI ++G Sbjct: 139 RVLNQYDRSMVDVVGHTDS---SGGDAINQPLSERRAASVAAHLINRGVMRERIY-VAGM 194 Query: 316 AHHRLKIASDPMN--SANRRIDILVE 339 + ++ + NRR++IL+ Sbjct: 195 SARAPIGSNATPEGKAQNRRVEILIR 220 >gi|163732302|ref|ZP_02139748.1| hypothetical protein RLO149_02587 [Roseobacter litoralis Och 149] gi|161394600|gb|EDQ18923.1| hypothetical protein RLO149_02587 [Roseobacter litoralis Och 149] Length = 659 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 83/257 (32%), Gaps = 16/257 (6%) Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 + +L + + + + + + SE L Sbjct: 406 AQQEQISERAQRQTELLNQQVAALRTQLGDLQAVLDDAKERDTAQQVQLQSLGSELNTAL 465 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 + E+ + E L +EK RL K + S + VL Sbjct: 466 ARVAAEERRRAELEEAERLRLQEEKARLEAEAARLTAETKNLEQYRSEFFGRL--RDVLG 523 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIR 269 I + +F+ + + E + K+ +L+ +I + Sbjct: 524 RQEGVRIEGDRFVFSSEVLFEPARADLSAEGQQEIAKVARILSSIADEIPPEIDWIIRVD 583 Query: 270 GHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP 326 GHTD P DNW LS RA S + +++S G+ +R+ +GF + + Sbjct: 584 GHTDNLPLSGVGQFADNWELSQGRALSVVKYMVESLGIPPNRL-AANGFGEFQPVAVENT 642 Query: 327 --MNSANRRIDILVEDR 341 + NRRI++ +R Sbjct: 643 PQARAQNRRIELKFTER 659 >gi|167567883|ref|ZP_02360799.1| hypothetical protein BoklE_35363 [Burkholderia oklahomensis EO147] Length = 421 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 7/134 (5%) Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V + ++ MF ++ ++ KI + ++ Sbjct: 290 NEIAAGTVSVDEDSRHGSVTFRSD---AMFSPGAAAVNSTMGPLIAKIAGEIVKVPGKVT 346 Query: 268 IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + G+TD P ++ N LS +RA Q+L +GV R+ + G + Sbjct: 347 VTGYTDNVPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLESV-GKGDADPIGDNGT 405 Query: 327 --MNSANRRIDILV 338 + NRR+DI V Sbjct: 406 VQGRALNRRVDITV 419 >gi|124007996|ref|ZP_01692696.1| outer membrane protein [Microscilla marina ATCC 23134] gi|123986580|gb|EAY26379.1| outer membrane protein [Microscilla marina ATCC 23134] Length = 336 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 7/129 (5%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273 + + T I + N F SSS + L ++ L +++ + GHTD Sbjct: 211 IKVDLFVTPIEKGVKILLNNLFFGVSSSKIESTSFDELDRLVRTLNEYPKMVVQLNGHTD 270 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331 A N LS RA S L G++ R+ + GF + ++ N Sbjct: 271 NQ---GGATRNQLLSQHRARSVRNYLANKGIARHRVK-VKGFGASQPIADNNTLKGRIRN 326 Query: 332 RRIDILVED 340 RR++ V + Sbjct: 327 RRVEFEVLE 335 >gi|157963436|ref|YP_001503470.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC 700345] gi|157848436|gb|ABV88935.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345] Length = 224 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 10/203 (4%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 Q+ + + +++ + +I + I A + Sbjct: 23 QTTNPYTNESQNGKATNGALIGAIAGAAIGVASSSKSDRAKGALIGAASGAALGGGIGYY 82 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG-E 257 + + L GV + I++++ + F + VL + Sbjct: 83 MDVQEAELRKQLQSSGVSVTRSGDNIILNMPNDVT---FGVDQTDLSQRAKQVLNSVVLV 139 Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + +++ GHTD+ N RLS RA L + V R++ G Sbjct: 140 ALEYDETKLNVMGHTDS---SGAESYNLRLSQVRASEVANYLTRQKVPAQRVAS-HGMGE 195 Query: 318 HRLKIASDP--MNSANRRIDILV 338 + +++ + NRR++I++ Sbjct: 196 SKPIASNETKQGRAENRRVEIIL 218 >gi|78063303|ref|YP_373211.1| hypothetical protein Bcep18194_B2456 [Burkholderia sp. 383] gi|77971188|gb|ABB12567.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 214 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + A++ +++ K + L+G +A R ++ I + Sbjct: 42 QLTSKLEEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGNVL 91 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNIAR---DNWRLSL 289 F +S P +L+ +G L E++ I G D R DNW LS Sbjct: 92 FALNSDQLQPAGRDLLKTLAAPLGAYLKTRDEILMISGFADDQQVHAGNRQFTDNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +GV + + F + ++ D + NRR++I Sbjct: 152 KRALTVTRALIDAGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199 >gi|295681051|ref|YP_003609625.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] gi|295440946|gb|ADG20114.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] Length = 559 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 13/150 (8%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K++ L + A + + + + I N +FD + P L+ + Sbjct: 415 DKQLQVALERVTATSHSPSIAAHSPPLAVTI-----DNFLLFDTGKTTLKPGAEPRLKGV 469 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKIS 313 +++ + + I GHTD + N +LS RA + + + +S R I Sbjct: 470 LDLIRANPDKRILIAGHTDNV---GPSVANQKLSEARAQAIRDWFVNTASLSVTRF-AIQ 525 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVEDR 341 G+ R +++ NRR++I + Sbjct: 526 GYGDTRPIASNESRQGREMNRRVEISLIPD 555 >gi|254687000|ref|ZP_05150858.1| chemotaxis protein MotB [Bacillus anthracis str. CNEVA-9066] gi|254724563|ref|ZP_05186346.1| chemotaxis protein MotB [Bacillus anthracis str. A1055] gi|254754750|ref|ZP_05206785.1| chemotaxis protein MotB [Bacillus anthracis str. Vollum] gi|254757582|ref|ZP_05209609.1| chemotaxis protein MotB [Bacillus anthracis str. Australia 94] Length = 153 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 12/153 (7%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 ++ L KKI ++ + + T G++++I++ +FD + E++ + Sbjct: 1 MKALQKKIDQYINE---KQLSSSFQTKLTEKGLMVTILEN---VLFDSGKADVKLESLGI 54 Query: 252 LQKIGEVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDR 308 +++ +L + S I++ GHTD P N NW LS RA + QVL+++ + ++ Sbjct: 55 AKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEK 114 Query: 309 ISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 S I G+ +R +D + NRR+++ + Sbjct: 115 FSAI-GYGEYRSIAPNDTQEGKAKNRRVEVFIL 146 >gi|253701760|ref|YP_003022949.1| OmpA/MotB domain protein [Geobacter sp. M21] gi|251776610|gb|ACT19191.1| OmpA/MotB domain protein [Geobacter sp. M21] Length = 486 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 85/274 (31%), Gaps = 15/274 (5%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P ++ ++ + + + + + ++ N + ++ + Sbjct: 206 PNTQDKCPNTRKGLKVDKFGCPTDSDYDGVPEAQDLCPDTSRGVPVDKNGCPESAKVPVS 265 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP--------PLSKEK 182 + SL G+ + + F L K Sbjct: 266 APVPAPVPAPAAEGVSLPGLPPAGEVAASPLPMNPLHPTPKAAFADMDFLQPVGNLGPLK 325 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 K +L + + + ++ + T +F SS Sbjct: 326 SAPAKPTVQLPPSVQLPPPVQVPPSESASAPQPIITADPSSVVGKTLVGTVTVLFAVDSS 385 Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 P+ + ++KI ++L + + + GHTD + RDN +LSL RA + + L++ Sbjct: 386 DVSPKYLGQIKKIADLLKANPGSTALVEGHTDNT---GALRDNLKLSLRRAENLKRALVR 442 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333 GV R+ + G + ++ NRR Sbjct: 443 YGVDP-RLLAVKGEGSLQPVASNATEQGRQKNRR 475 >gi|78485864|ref|YP_391789.1| OmpA/MotB [Thiomicrospira crunogena XCL-2] gi|78364150|gb|ABB42115.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2] Length = 248 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 5/167 (2%) Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 ++ + + K + R + L S + + + Sbjct: 68 TEQINPIPMQSSKIEARPEKLKPLYESIAKTYEKSQQESNIEVTIDEERQQVKVS-FPER 126 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAY 293 F + P V L+ + L +T ++ GHTD P + NW LS RA Sbjct: 127 ISFPTGEADLKPGFSVQLR-KLKNLIDNTILVKAIGHTDKRPISSDRFRSNWELSSARAA 185 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338 + Q L+ + +++ G A +D + NRR+++++ Sbjct: 186 AVIQQLIDDKIITPDQAEVIGVADTHPVDEQENDAAYALNRRVEVVL 232 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 45/130 (34%) Query: 31 GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90 +W +AD M++LMA F++++ ++ D + I + + S+ + Sbjct: 9 PTWLATFADLMSLLMAVFVLLFAMSTLDAKKYEGIVESLTNTLGHGAGMSQVQLEYFKKT 68 Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 E+ + + S E + L ++ Q+ N + +Q Sbjct: 69 EQINPIPMQSSKIEARPEKLKPLYESIAKTYEKSQQESNIEVTIDEERQQVKVSFPERIS 128 Query: 151 SEKGKDLCKS 160 G+ K Sbjct: 129 FPTGEADLKP 138 >gi|326798930|ref|YP_004316749.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] gi|326549694|gb|ADZ78079.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] Length = 229 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 7/118 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286 I+ + +F + PE ++ + + L + + I GHTD + A N Sbjct: 104 IVKFDSGILFGFDQTALKPEAQTNIKNLVKSLNDNPDTDILIIGHTDN---KGTAEYNQG 160 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 LS RA + + G+S R +K G + + + + NRR++I++ + Sbjct: 161 LSERRAAAVKNYAVAQGLSSSR-AKTEGKSFNEPIADNSTEAGRAQNRRVEIVIVANE 217 >gi|317153788|ref|YP_004121836.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316944039|gb|ADU63090.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 247 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 71/196 (36%), Gaps = 9/196 (4%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 SE + ++ + A+ R++ ++ K + + Sbjct: 52 SETFSSVTQALQGKLEKVSTSRITQEEAGVLIDQAIMRRQIIESQRKVFAEVKTLQTKKG 111 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIR 269 + V I I + MF P+ + ++ + + + H + I I Sbjct: 112 VEGLVSANFEDGLITIRV---PGDVMFGSGQVNLSPKGVELVTALKDFFIQHRDQNIKII 168 Query: 270 GHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 G+TD + DNW +S RA + + L+ G+ R++ +G A+ + Sbjct: 169 GYTDNISPGKNSRFLDNWEISALRAVNVLRELLGMGIESTRLTA-TGLAYLNPIYPNTSE 227 Query: 328 --NSANRRIDILVEDR 341 + NRR++ ++E R Sbjct: 228 EFRAKNRRVEFVLEKR 243 >gi|157692040|ref|YP_001486502.1| flagellar motor protein MotB [Bacillus pumilus SAFR-032] gi|157680798|gb|ABV61942.1| flagellar motor protein B [Bacillus pumilus SAFR-032] Length = 254 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 81/206 (39%), Gaps = 10/206 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +Q N + D E++ N + +E + L + K Sbjct: 48 EQMAKSFNVVFTGGTGVMDQSSMQSTEETENSNQTKKAAEEDEEAKAKARDHAVLTKVKK 107 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 ++ S ++ + + + T G+LI+I D FD ++ P+ + + ++I + Sbjct: 108 QVDSFIAN---KKLGAKLETKLTDEGLLITIEDS---IFFDSGRAVIRPQDVPLAKEISK 161 Query: 258 VLAHSTEVISI-RGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + + GHTD P RN NW LS RA + +L+++ GF Sbjct: 162 LLVINPARDIVISGHTDNVPIRNSDFESNWYLSAIRAVNFLSILLENSNLNQENFSTKGF 221 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 + ++D NRR+++L+ Sbjct: 222 GEFKPIASNDTAEGRSKNRRVEVLIL 247 >gi|256839827|ref|ZP_05545336.1| outer membrane lipoprotein [Parabacteroides sp. D13] gi|298375585|ref|ZP_06985542.1| OmpA family protein [Bacteroides sp. 3_1_19] gi|256738757|gb|EEU52082.1| outer membrane lipoprotein [Parabacteroides sp. D13] gi|298268085|gb|EFI09741.1| OmpA family protein [Bacteroides sp. 3_1_19] Length = 428 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S PE++ + +I +++ + + S+ GHTD++ N LS R+ + Sbjct: 327 FDVGKSTIKPESMGEINRIVKLMTDNPDLRFSVEGHTDST---GNEASNQTLSEARSNAI 383 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 L++ G+S DR+S SG + D + NRR++ + Sbjct: 384 VGKLVELGISADRLSA-SGKGQSSPIADNGTDEGRAKNRRVEFV 426 >gi|288940353|ref|YP_003442593.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM 180] gi|288895725|gb|ADC61561.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180] Length = 608 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 34/284 (11%), Positives = 90/284 (31%), Gaps = 7/284 (2%) Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 + + + + ++ + ++ + + + + + +++ + Sbjct: 328 ELQTVLETARAEAGDEARKTERLAAAESRIQELESSLETVRAEAEEARTTLNAALEQARA 387 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + + +Q + + + ++++ + ++ Sbjct: 388 RLAELQQAAETTAQDENQALTEATARIAALEAELEQARAQDGDAEALSAAQARIDALEAE 447 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + ++ + + T T + + + F Sbjct: 448 LETARQSVQPEAPSADQSEAAAELARLRALQTRFAQLNGTFTERGLLLSLAESELSFPTG 507 Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 + + L++I E+L E I GHTD+ A N LSL RA + Q L Sbjct: 508 RATLPTGELASLERIAELLKAHPELTARIEGHTDSL---GSAALNQSLSLQRAEAVRQAL 564 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 ++ GV R+S G R + NRR+++ + DR Sbjct: 565 VERGVDGGRLSA-EGLGPTRPIADNATAEGRGKNRRVEVYILDR 607 >gi|149919402|ref|ZP_01907883.1| OmpA domain protein [Plesiocystis pacifica SIR-1] gi|149819708|gb|EDM79133.1| OmpA domain protein [Plesiocystis pacifica SIR-1] Length = 182 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S+ L ++ +L + EV+ E ++ I GHT + N LS RA + Sbjct: 70 FAHDSAEILEDSFEILDDVAEVMNAHPELPMLDIIGHTSTE---GSDKHNMELSTARAKA 126 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L GV R++ G NRR++ + + Sbjct: 127 VADYLAGHGVDASRVTS-EGKGETEPIADESTEEGKRQNRRVEFKIIKPE 175 >gi|94986926|ref|YP_594859.1| flagellar motor protein [Lawsonia intracellularis PHE/MN1-00] gi|94731175|emb|CAJ54537.1| Flagellar motor protein [Lawsonia intracellularis PHE/MN1-00] Length = 237 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 73/209 (34%), Gaps = 9/209 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + K L K+ D N + L ++ + ++ LA Sbjct: 27 AMTPPEVKEGLAAYFSSSDATFKTPDSSPISNNPLINQIDKLDTRQLKINETEQSHYALA 86 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 K+ L G+ + + ++ + F ++ PE V+ + Sbjct: 87 NKLKKMLMADAIPQSATGISADDVGVLLRVN-----SNSTFLPGTATLTPEGKKVMGTVL 141 Query: 257 EVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 VL + IRGH D + NW LS RA +A Q L++ G+ RI + G Sbjct: 142 AVLREYNLYLVIRGHADIGEITKGSPFASNWELSGARAAAAAQYLVEHGIKASRIRSV-G 200 Query: 315 FAHHRLKIASDPMNS-ANRRIDILVEDRQ 342 +A R S P S NRRI+ + Sbjct: 201 YADTRPLEPSSPEGSTKNRRIEFYFHRPE 229 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 35/80 (43%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 GSWK+ YADF+T +MAFFL+MWI+ T + K+ + YF+ T Sbjct: 2 SGSWKVAYADFVTAMMAFFLLMWILAMTPPEVKEGLAAYFSSSDATFKTPDSSPISNNPL 61 Query: 90 PERSSQNKIDLSIDEHITKN 109 + + ++ Sbjct: 62 INQIDKLDTRQLKINETEQS 81 >gi|78060486|ref|YP_367061.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383] gi|77965036|gb|ABB06417.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 220 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 F S++ L + + + + G+TDA+ N LS R Sbjct: 114 GDAYFATDSAVLTSAATAALDTLLNQQGDKHFSRVEVDGYTDAT---GSDAHNQVLSKRR 170 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 A + L + G+ + +G +++ + NRR++I ++ Sbjct: 171 ADAVAGYLREHGLKAESF-AATGHGETNPAASNETAEGRARNRRVEISLQK 220 >gi|307718975|ref|YP_003874507.1| hypothetical protein STHERM_c12930 [Spirochaeta thermophila DSM 6192] gi|306532700|gb|ADN02234.1| hypothetical protein STHERM_c12930 [Spirochaeta thermophila DSM 6192] Length = 395 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 12/149 (8%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +K+ + + D + ET+ G+ I + F S++ LPE L+KI Sbjct: 254 REKVREEVEAAIEDLQIPDAEVETSEEGVTIRL----ENIQFPPDSALLLPEEQEKLRKI 309 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS-EDRISKIS 313 ++L+ E + GHT LS++RA + LMK GV ++I I Sbjct: 310 AQILSRYPERDLLVEGHT---ALAGTPEGRLALSIERAKAVADFLMKLGVRRPEQIV-IR 365 Query: 314 GFAHHRLKIASDPMNS--ANRRIDILVED 340 G+ R + NRR++I + + Sbjct: 366 GYGATRPIADNTTEEGRSRNRRVEITILE 394 >gi|224436415|ref|ZP_03657435.1| flagellar motor protein MotB [Helicobacter cinaedi CCUG 18818] gi|313142933|ref|ZP_07805126.1| flagellar motor protein MotB [Helicobacter cinaedi CCUG 18818] gi|313127964|gb|EFR45581.1| flagellar motor protein MotB [Helicobacter cinaedi CCUG 18818] Length = 250 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 8/113 (7%) Query: 232 RNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEV--ISIRGHTD--ASPFRNIARDNWR 286 + F+ S+ + + LQ++ ++ + I +RG+TD + P + +DN+ Sbjct: 116 PSNLFFESGSAEINNSDVYLYLQRMTAIIKKLPDYVKIDVRGYTDNASLPIGSRYKDNYE 175 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 LS R+ + + L+K+G+S +RI SG+ H+ +D + N R++I Sbjct: 176 LSSARSLAVMKNLIKNGISPERI-SFSGYGEHQAVAPNDSTINRAKNNRVEIF 227 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 75/226 (33%), Gaps = 8/226 (3%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG----- 73 KK + P W + YADF+++L+A F+ +W I++T +A++ F Sbjct: 3 KKKKCPECPAG-EKWAVPYADFLSLLLALFIALWAISSTGSADSEALKTEFVKIFDFTLT 61 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 L + I D + E + ++ I + + + I + RL +N+F+ Sbjct: 62 SPLPSNQDDINDSEVENESGAISQTSSVTTAEIQQMAEEGGILEQMEMGLSLRLPSNLFF 121 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL--AMKRKKR 191 S S + + L ++ + + P+ + + Sbjct: 122 ESGSAEINNSDVYLYLQRMTAIIKKLPDYVKIDVRGYTDNASLPIGSRYKDNYELSSARS 181 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 L + I + +S G I+ +F Sbjct: 182 LAVMKNLIKNGISPERISFSGYGEHQAVAPNDSTINRAKNNRVEIF 227 >gi|86147507|ref|ZP_01065818.1| outer membrane protein [Vibrio sp. MED222] gi|218709202|ref|YP_002416823.1| putative outer membrane protein [Vibrio splendidus LGP32] gi|85834675|gb|EAQ52822.1| outer membrane protein [Vibrio sp. MED222] gi|218322221|emb|CAV18335.1| putative outer membrane protein [Vibrio splendidus LGP32] Length = 222 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 9/208 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +Q+ +S L + + + + I A Sbjct: 18 QATQRQNATTGESETNSATQGALIGAIAGAVAGAATGDDSKDRRKRALIGAAGGAAVGGG 77 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + L + + GV E L ++ N FD S L+ Sbjct: 78 IGYYFDQQEAALREELMNSGVQVERVGENQL--LLRLENGIGFDSGSYALESSIHKTLRG 135 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + + GHTD++ N LS RA S L+ V+ R Sbjct: 136 VARILVEYPDTSLVIEGHTDST---GSESSNQVLSERRAESVRAFLISQDVAAGRAIA-R 191 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVE 339 G ++ + NRR++I + Sbjct: 192 GNGERYPLCDNNTSQGRACNRRVEIQIL 219 >gi|188592172|ref|YP_001796770.1| hypothetical protein RALTA_B0336 [Cupriavidus taiwanensis LMG 19424] gi|170938546|emb|CAP63533.1| Putative transmembrane protein, OmpA/MotB motif [Cupriavidus taiwanensis LMG 19424] Length = 215 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 66/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS +K+++ + + L+G +A R ++ I + + Sbjct: 43 ELSARLEAEVKQRQEEAQRRETLEKALAGPLAAG----------RVTLVNGRIGISGSVL 92 Query: 237 FDKSSSIPLPETIVVLQKIGE----VLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S+ PE +L+ + + L E++ + G TD R DNW LS Sbjct: 93 FALNSAELQPEGRDLLRSLAQPLSAYLRSRDEILMVSGFTDDQQVREGNRRFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 RA + + L+ +G+ + + F + + + NRR++I Sbjct: 153 QRALTVTRTLIDAGIPPSSVFSAA-FGSQQPVTPNADAASRAKNRRVEI 200 >gi|291532054|emb|CBK97639.1| Flagellar motor protein [Eubacterium siraeum 70/3] Length = 339 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 73/196 (37%), Gaps = 14/196 (7%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIV 212 + + + N PP ++ ++ + L ++ S L +++ Sbjct: 59 NPFVMDEQPKNNAADTNGNAEAPPNTQNGGTTSEQTEGLPSDFNQLYSFLKTTTDKNDLG 118 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIR 269 + V E T T I I NT MFD +S++ E VL K + + + Sbjct: 119 QYVYIEQTPTRIFIRFN---NTIMFDGNSAVLKEEGKQVLNKFMPGIKAVNKYIKSCEVS 175 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN 328 GHT + ++W LS RA S + + V ++ + G A + + Sbjct: 176 GHTAKAV---SDVNDWDLSAARASSVVKYMDYNRCVDSEKF-TVEGKACYTPIADNSTAE 231 Query: 329 SA--NRRIDILVEDRQ 342 NRR++I++ Q Sbjct: 232 GRATNRRVEIMIVRAQ 247 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 11/109 (10%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 G+W YAD +T+L+ FF++++ ++ D+ + I Q F G + Sbjct: 3 KRRAGGGEEKGNWLDTYADMVTLLLCFFVLLYSASSVDETKWQYIYQSFTSSGSYI---- 58 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 NP Q K + + + + + G T ++ + Sbjct: 59 -------NPFVMDEQPKNNAADTNGNAEAPPNTQNGGTTSEQTEGLPSD 100 >gi|312174309|emb|CBX82562.1| putative outer membrane lipoprotein yiaD precursor [Erwinia amylovora ATCC BAA-2158] Length = 221 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SSS P L + Sbjct: 81 YMDVQEAKLRDKMKGTGVSVTRSGDNIVLNM---PNNVTFDSSSSTLKPAGANTLTGVAM 137 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD+ + N LS RA L+ GV+ +R+ + +G Sbjct: 138 VLKEYPKTAVNVVGYTDS---SGSRQLNMNLSQQRADGVGSALIAQGVAANRV-RTNGMG 193 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 194 SDNPVASNSSAEGKAQNRRVEITL 217 >gi|163755660|ref|ZP_02162779.1| OmpA/MotB [Kordia algicida OT-1] gi|161324573|gb|EDP95903.1| OmpA/MotB [Kordia algicida OT-1] Length = 635 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 10/120 (8%) Query: 225 LISIIDQ---RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNI 280 +++I D FD SS +L I L + I GH D+ Sbjct: 515 VVTIPDPAVGERKVYFDFDSSKLDKNAKEILDNIAANLKNDAGYNISIIGHADSR---GT 571 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 R N +LS++RA L +S I I+G + + NRR+++++ Sbjct: 572 DRYNDKLSIERAQVIKNYLDSKKLSNSNI-TITGKGESAPIAPNTTPEGRAKNRRVELII 630 >gi|315180390|gb|ADT87304.1| lipoprotein, hypothetical [Vibrio furnissii NCTC 11218] Length = 222 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 64/208 (30%), Gaps = 9/208 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + +Q+ +S L + + + I A Sbjct: 18 AATQRQNATTGETETNSATKGALLGALAGAAVGLASGDDAKERRQRALIGAAGGAAVGGG 77 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + L + + GV E L+ + +N F +S L+ Sbjct: 78 VGYYFDQQEAALRQELLNSGVQVERVGENQLVLRM--QNGIGFQTNSYQLDSSIHNTLRG 135 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + ++L + + GHTD++ N LS RA S L+ GV+ R Sbjct: 136 VAKILVEYPDTSLVIDGHTDST---GSDTTNQILSERRAESVRSFLLSQGVAAGRAIA-R 191 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339 G + + NRR++I + Sbjct: 192 GNGERYPLCTNSTADGRSCNRRVEIQIL 219 >gi|313610144|gb|EFR85455.1| chemotaxis protein MotB [Listeria monocytogenes FSL F2-208] Length = 170 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 14/166 (8%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 +L + +++++ K+I S ++ +N+ + + + G+LI+I D +F Sbjct: 1 AALLKKQNEEKIEAFKKQIDSYIAA---ENLGTKMTTKYSDEGLLITIRDD---ILFQSG 54 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297 S+ + ++IGE+ + + GHTD P NW LS+ RA + + Sbjct: 55 SAELTAGKREIAKEIGELFXQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFME 114 Query: 298 VLMKSG--VSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 +++ V+ S G+ R +D NRR++I+V Sbjct: 115 AIIQENSEVNPGEFSA-RGYGEFRPVAKNDIAANREKNRRVEIMVR 159 >gi|121603984|ref|YP_981313.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120592953|gb|ABM36392.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2] Length = 220 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288 D + FD S VL L + +SI GHTD++ N LS Sbjct: 107 DIPSDVSFDVGRSAIKSNFAPVLTNFATSLNQNPITTVSIIGHTDST---GSDSVNNPLS 163 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 +DRA +A L+ GV+ RI G + + NRR++I V Sbjct: 164 VDRANAARDYLVGRGVAAQRI-ATDGRGSREPIADNSSAQGRAKNRRVEIYV 214 >gi|114045658|ref|YP_736208.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7] gi|113887100|gb|ABI41151.1| OmpA/MotB domain protein [Shewanella sp. MR-7] Length = 487 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 8/145 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + G+ E I +F+ S LPE V++ + L Sbjct: 345 RVLEETELKDDRVGINLEALTDQIEAKGHVALEGLLFEYDSDKLLPEAQPVVEVLASYLK 404 Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHH 318 + + + GHTD + N LS RA + ++L G+ ++ + G H Sbjct: 405 ANPKRAFYVVGHTDD---KGNQAYNQGLSQRRAVAIVKLLTSSHGIQTQQLEAV-GIGEH 460 Query: 319 RLKIASDPMNS--ANRRIDILVEDR 341 ++ NRR+++++ Sbjct: 461 APVASNSDEAGQQQNRRVELVLRSD 485 >gi|311746464|ref|ZP_07720249.1| putative flagellar motor protein MotB [Algoriphagus sp. PR1] gi|126575359|gb|EAZ79691.1| putative flagellar motor protein MotB [Algoriphagus sp. PR1] Length = 282 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 92/271 (33%), Gaps = 14/271 (5%) Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 GI S+ K + + + + + + Sbjct: 8 TGILGASMMVSCVSKKKYTELESNLFKTQTELANTNQEKAELEEKMAIIEARVAEYNNRI 67 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD-----L 195 + S + L + L+K + + L+D + Sbjct: 68 NSLRAVNDELSGENASLYDIQGSTIMSKNSKEKMNETLAKVDQAKLAEAQTLEDSVNLAV 127 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + ++ D V + +T ++IS+ D+ +F+ S + +LQK+ Sbjct: 128 EYNLKQNITETTVDGEEDDVQIDIDQTVVMISVSDKL---LFNTGSYRINKKADPLLQKL 184 Query: 256 GEVLAHSTE-VISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKI 312 EV+ + I GHTD + +DNW LS+ RA S + L ++ V+ +++ Sbjct: 185 AEVINAEPSLQVMIEGHTDPRSISTGVLQDNWDLSVKRATSIVRKLQENYSVAPEKMIAA 244 Query: 313 SGFAHHRLKIASDPMN--SANRRIDILVEDR 341 G + + + +D + NRR I++ Sbjct: 245 -GRSSYMPLVENDTPENMAINRRTRIVLIPD 274 >gi|22127962|ref|NP_671385.1| putative outer membrane lipoprotein [Yersinia pestis KIM 10] gi|45443710|ref|NP_995249.1| putative outer membrane lipoprotein [Yersinia pestis biovar Microtus str. 91001] gi|51598197|ref|YP_072388.1| outer membrane lipoprotein [Yersinia pseudotuberculosis IP 32953] gi|108808999|ref|YP_652915.1| putative outer membrane lipoprotein [Yersinia pestis Antiqua] gi|108813881|ref|YP_649648.1| putative outer membrane lipoprotein [Yersinia pestis Nepal516] gi|145597343|ref|YP_001161418.1| putative outer membrane lipoprotein [Yersinia pestis Pestoides F] gi|150260986|ref|ZP_01917714.1| putative lipoprotein [Yersinia pestis CA88-4125] gi|162420588|ref|YP_001608097.1| putative outer membrane lipoprotein [Yersinia pestis Angola] gi|165926066|ref|ZP_02221898.1| OmpA family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936922|ref|ZP_02225488.1| OmpA family protein [Yersinia pestis biovar Orientalis str. IP275] gi|166009516|ref|ZP_02230414.1| OmpA family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213252|ref|ZP_02239287.1| OmpA family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398489|ref|ZP_02304013.1| OmpA family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421106|ref|ZP_02312859.1| OmpA family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425514|ref|ZP_02317267.1| OmpA family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467912|ref|ZP_02332616.1| OmpA family protein [Yersinia pestis FV-1] gi|170022281|ref|YP_001718786.1| putative outer membrane lipoprotein [Yersinia pseudotuberculosis YPIII] gi|186897420|ref|YP_001874532.1| putative outer membrane lipoprotein [Yersinia pseudotuberculosis PB1/+] gi|218931056|ref|YP_002348931.1| putative outer membrane lipoprotein [Yersinia pestis CO92] gi|229839783|ref|ZP_04459942.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841867|ref|ZP_04462023.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India 195] gi|229896745|ref|ZP_04511909.1| putative lipoprotein [Yersinia pestis Pestoides A] gi|229904405|ref|ZP_04519516.1| putative lipoprotein [Yersinia pestis Nepal516] gi|270488345|ref|ZP_06205419.1| OmpA family protein [Yersinia pestis KIM D27] gi|294505605|ref|YP_003569667.1| putative lipoprotein [Yersinia pestis Z176003] gi|21961106|gb|AAM87636.1|AE014011_3 putative outer membrane protein [Yersinia pestis KIM 10] gi|45438580|gb|AAS64126.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001] gi|51591479|emb|CAH23150.1| OmpA-OmpF family porin [Yersinia pseudotuberculosis IP 32953] gi|108777529|gb|ABG20048.1| lipoprotein [Yersinia pestis Nepal516] gi|108780912|gb|ABG14970.1| putative lipoprotein [Yersinia pestis Antiqua] gi|115349667|emb|CAL22647.1| putative lipoprotein [Yersinia pestis CO92] gi|145209039|gb|ABP38446.1| lipoprotein [Yersinia pestis Pestoides F] gi|149290394|gb|EDM40471.1| putative lipoprotein [Yersinia pestis CA88-4125] gi|162353403|gb|ABX87351.1| OmpA family protein [Yersinia pestis Angola] gi|165915164|gb|EDR33775.1| OmpA family protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921926|gb|EDR39103.1| OmpA family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165991438|gb|EDR43739.1| OmpA family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205550|gb|EDR50030.1| OmpA family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166961235|gb|EDR57256.1| OmpA family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050993|gb|EDR62401.1| OmpA family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055528|gb|EDR65321.1| OmpA family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169748815|gb|ACA66333.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII] gi|186700446|gb|ACC91075.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+] gi|229678523|gb|EEO74628.1| putative lipoprotein [Yersinia pestis Nepal516] gi|229691206|gb|EEO83259.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India 195] gi|229696149|gb|EEO86196.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700284|gb|EEO88319.1| putative lipoprotein [Yersinia pestis Pestoides A] gi|262363769|gb|ACY60490.1| putative lipoprotein [Yersinia pestis D106004] gi|262367705|gb|ACY64262.1| putative lipoprotein [Yersinia pestis D182038] gi|270336849|gb|EFA47626.1| OmpA family protein [Yersinia pestis KIM D27] gi|294356064|gb|ADE66405.1| putative lipoprotein [Yersinia pestis Z176003] gi|320017406|gb|ADW00978.1| putative lipoprotein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 219 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD +SS P L + Sbjct: 80 YMDVQEAKLREKMSGTGVSVTRQGENIVLNM---PNNVTFDTNSSNLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N LS RA + L+ GV+ +RI + G Sbjct: 137 VLKEYDKTAVNVTGYTDST---GARAHNIVLSQQRADNVASALIVQGVAANRI-RTYGAG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PDNPVASNSTAAGKAQNRRVEITL 216 >gi|319792464|ref|YP_004154104.1| ompa/motb domain protein [Variovorax paradoxus EPS] gi|315594927|gb|ADU35993.1| OmpA/MotB domain protein [Variovorax paradoxus EPS] Length = 216 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + PE L + E + + I GHTD+ N RLS+ RA + L+ Sbjct: 116 VLKPEGRAKLTDLVEKIRGVNLEVIIAVGHTDSI---GTDAYNQRLSVRRAEAVKAFLVS 172 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G+ +R+ G + + + NRR++I V + Sbjct: 173 KGIERNRVYT-EGKGEKQPVADNRTKEGRAKNRRVEIEVVGTR 214 >gi|29840731|ref|NP_829837.1| peptidoglycan-associated lipoprotein [Chlamydophila caviae GPIC] gi|29835081|gb|AAP05715.1| peptidoglycan-associated lipoprotein [Chlamydophila caviae GPIC] Length = 191 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S E + + ++ + I GHTD A N L RA + Sbjct: 87 FATDSYTIKGEENLAILSSLVRQMQKSPKTTLYIEGHTDER---GAAAYNLALGARRANA 143 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 Q L+K G+S DR+ IS + + + ++ NRR + V R Sbjct: 144 VKQHLIKQGISADRLFTIS-YGKEQPVNSGHNELAWQQNRRTEFKVHAR 191 >gi|91785602|ref|YP_560808.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans LB400] gi|91689556|gb|ABE32756.1| outer membrane porin, OmpA/MotB family [Burkholderia xenovorans LB400] Length = 584 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 11/108 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-----IRGHTDASPFRNIARDNWRLSLDR 291 F +S+ + L + VL + G++D N +LS R Sbjct: 478 FASASARVPASAVEDLNQSAHVLNACAGNGKTARLEVAGYSDNV---GGEAANLQLSKQR 534 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 A + L+++GV D + G+ R ++D + NRRI+ + Sbjct: 535 AEAVRAYLVRTGVPADSLIA-QGYGDARPVASNDTASGRFANRRIEFV 581 >gi|300716120|ref|YP_003740923.1| outer membrane protein A [Erwinia billingiae Eb661] gi|299061956|emb|CAX59072.1| Outer membrane protein A [Erwinia billingiae Eb661] Length = 357 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 25/133 (18%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L+ + + G+TD + N +LS Sbjct: 229 KSDVLFTFNKASLKPEGQQALDQLYTQLSSLDPKDGSVVVLGYTDRI---GSDQYNQKLS 285 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN---------RRIDI- 336 RA S L+ G+ ++IS G + D + N RR++I Sbjct: 286 EKRAQSVVDYLVSKGIPSNKISA-RGMGESNPVTGNTCDSVKGRNALIDCLAPDRRVEIE 344 Query: 337 ------LVEDRQG 343 +V QG Sbjct: 345 VKGIKDVVTQPQG 357 >gi|206562551|ref|YP_002233314.1| hypothetical protein BCAM0690 [Burkholderia cenocepacia J2315] gi|198038591|emb|CAR54550.1| putative outer membrane protein-OmpA family [Burkholderia cenocepacia J2315] Length = 214 Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + A++ ++ K + L+G +A R ++ I + Sbjct: 42 QLTSKLEEAVRARQLEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGNVL 91 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S P +L+ + L E++ + G D DNW LS Sbjct: 92 FALNSDQLQPAGRDLLKTLAVPLATYLKTRDEILMVSGFADDQQVHAGNRLFADNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +GV + + F + ++ D + NRR++I Sbjct: 152 KRALTVTRALIDAGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199 >gi|116327025|ref|YP_796745.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332316|ref|YP_802034.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119769|gb|ABJ77812.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116126005|gb|ABJ77276.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 667 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 8/149 (5%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 +S L+ N + V I Q N F+ S +PE+ L ++ E Sbjct: 523 PVSQNLNLNSKKNFSEKVEVLLQLPRIEERGTIQINNLFFESKSFRIIPESEPELNRLAE 582 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGF 315 ++ + ++ I GHTD +DN LS RA + + L K + +RI GF Sbjct: 583 IMKENPDIKIQIEGHTDNV---GKKKDNLLLSEKRAIAIAEYLSQKHSIPTERIKT-RGF 638 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + +D NRR++ + + Sbjct: 639 GDNFPLSKNDSEEGRRKNRRVNFTILKSK 667 >gi|260431631|ref|ZP_05785602.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415459|gb|EEX08718.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157] Length = 643 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 77/295 (26%), Gaps = 15/295 (5%) Query: 57 TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK------NS 110 TD + + + + E + + + Sbjct: 315 TDPALFDRVVGELENALPEVFALHAVLPKPETDKHDGPVEFTATRSPEGLVQLRGRLGDE 374 Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 + + + + + + + + + E L N Sbjct: 375 LQRDMVDSYARAAFGSDRVHTAARVVEELPQTWPVRVLAGLEALSWLTNGALTVTPDNVA 434 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 + +A ++L + S V + + I + Sbjct: 435 LSGISHDQDARAKIAGLLSEKLGEGQNFDLSITYQPVPEPA--ETRPDPDACEARIVEVQ 492 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289 F+ S+ ++ L +I E+L + I+GHTD+ N +LS Sbjct: 493 SGGKITFEPGSATVSADSRDSLNQIAEILRECGPIRMEIQGHTDSQ---GREEMNQQLSQ 549 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA S L V S + G+ + + NRRI+ + + Sbjct: 550 ARAQSILNELRARRVPTSSFSAV-GYGETQPIADNGTEEGREENRRIEFRLIRPE 603 >gi|300772773|ref|ZP_07082643.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761076|gb|EFK57902.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum ATCC 33861] Length = 628 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 N F + LP + L + L + I I GHTD + + N LS +R Sbjct: 522 NNIFFALNKYDLLPSSTSDLNTLVLFLQENPLIRIEIGGHTDNT---GNDQLNKTLSDNR 578 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A + L+ G+S +R+ G+ ++ ++ + NRR + + Sbjct: 579 AKAVVSYLIARGISANRLLA-KGYGSNQPLATNETETGKALNRRTEFKI 626 >gi|117918603|ref|YP_867795.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3] gi|117610935|gb|ABK46389.1| OmpA/MotB domain protein [Shewanella sp. ANA-3] Length = 487 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 8/145 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L + G+ E I +F+ S LPE V++ + L Sbjct: 345 RVLEETELKDDRVGINLEALTDQIEAKGHVALEGLLFEYDSDKLLPEAQPVVEVLASYLK 404 Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHH 318 + + + GHTD + N LS RA + ++L G+ ++ + G H Sbjct: 405 ANPKRAFYVVGHTDD---KGNQAYNQGLSQRRAVAIVKLLTTSHGIQTQQLEAV-GIGEH 460 Query: 319 RLKIASDPMNS--ANRRIDILVEDR 341 ++ NRR+++++ Sbjct: 461 APVASNSDEAGQQQNRRVELVLRSD 485 >gi|299768758|ref|YP_003730784.1| Outer membrane protein A precursor [Acinetobacter sp. DR1] gi|298698846|gb|ADI89411.1| Outer membrane protein A precursor [Acinetobacter sp. DR1] Length = 159 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 +FD +++ L ++ L + I GHTD A N +LS + Sbjct: 52 PERLLFDFNNAELKQSHEAELVRLANQLNKYDLNKLKIVGHTDDV---GDAAYNQKLSEE 108 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA S + + G ++ I + G + + + + NRR+ I+V Sbjct: 109 RAQSVANLFLARGFKKENIY-VIGRGSTQPYVPNTTNENRAINRRVAIVV 157 >gi|313674297|ref|YP_004052293.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312940995|gb|ADR20185.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 665 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ +S + +++ +L K+ V+ + + I GHTD N LS RA + Sbjct: 562 FELASDVIRAQSLPILDKVVTVMQENPDYKLKISGHTDNQ---GDDDANLLLSHKRAQAT 618 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + LM G++ R+ + G+ + ++D + NRR++ + Sbjct: 619 KKYLMDQGIAILRLDAV-GYGEMQPIESNDTAEGRAKNRRVEFEI 662 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 12/136 (8%) Query: 211 IVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-S 267 + + + E + I++ + + F ++ I + L + +L + ++ Sbjct: 374 LSEYLEKEQKLAMLPIAVGSEIPVHHITFVNNADIFRSDAYYELDRFASLLQSNPQMQVE 433 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 I GHT P +N RLS +RA + K V DR+ +I G ++ + Sbjct: 434 IIGHTAQLPL---EAENDRLSYNRAKAVADYFEKKNVHPDRL-RIKGAGQKLAFSSNMDV 489 Query: 328 NSAN-----RRIDILV 338 N RI I + Sbjct: 490 ALKNGIELEDRITIKI 505 >gi|167574381|ref|ZP_02367255.1| hypothetical protein BoklC_31379 [Burkholderia oklahomensis C6786] Length = 421 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 7/134 (5%) Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + V + ++ MF ++ ++ KI + ++ Sbjct: 290 NEIAAGTVSVDEDSRHGSVTFRSD---AMFSPGAAAVNSTMGPLIAKIAGEIVKVPGKVT 346 Query: 268 IRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + G+TD P + N LS +RA Q+L +GV R+ + G + Sbjct: 347 VTGYTDNVPINSRQFASNEALSEERATQVMQMLQSAGVPASRLESV-GKGDADPIGDNGT 405 Query: 327 --MNSANRRIDILV 338 + NRR+DI V Sbjct: 406 VQGRALNRRVDITV 419 >gi|148979919|ref|ZP_01815777.1| outer membrane protein [Vibrionales bacterium SWAT-3] gi|145961523|gb|EDK26825.1| outer membrane protein [Vibrionales bacterium SWAT-3] Length = 221 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 12/146 (8%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + ++ V+ + + + N FD S L+ + Sbjct: 82 DRQEAALREELMNSGVQVERVGENQLLLRLE-----NGIGFDSGSYALESSIHNTLRGVA 136 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + + GHTD++ N LS RA S L+ V+ R G Sbjct: 137 RILVEYPDTSLVIEGHTDST---GSESTNQILSERRAESVRAFLISQDVAAGRAIA-RGN 192 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 ++ NRR++I + Sbjct: 193 GERYPLCDNNTSRGRACNRRVEIQIL 218 >gi|104783066|ref|YP_609564.1| peptidoglycan-associated lipoprotein [Pseudomonas entomophila L48] gi|95112053|emb|CAK16780.1| peptidoglycan-associated lipoprotein precursor [Pseudomonas entomophila L48] Length = 165 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 66 FEYDSSDLKPEAMRSLDVHAKDLKSNGNRVVLEGNTDER---GTREYNMALGERRAKAVQ 122 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 163 >gi|17548982|ref|NP_522322.1| lipoprotein [Ralstonia solanacearum GMI1000] gi|17431232|emb|CAD17912.1| putative outer membrane protein [Ralstonia solanacearum GMI1000] Length = 277 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 73/246 (29%), Gaps = 12/246 (4%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 D + + + G + + + + + Sbjct: 34 PGDPAPASATSPVPGPVVAGGMVPDEATKASVLARLRELYGSANVVDQIEVGNVVSPPNW 93 Query: 157 LC---KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 K + + ++ + + Q LA +++TL Sbjct: 94 TGNVQKILSPQIKQVSRGQLNIDGTQVAVHGDVQNEAQRQQLASDMATTLGASYTIKNGL 153 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272 V + ++ + ++ ++ F+ S+ P+ +L ++ VL I GHT Sbjct: 154 RVAAVSEQSLLDQTLANRIIE--FETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHT 211 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA 330 D N LS RA + L+ G ++ I G + + D S Sbjct: 212 DN---SGSRAMNLNLSQARAETVKNYLISKGAEPGTLTAI-GVGPDQPVAPNATDEGRSR 267 Query: 331 NRRIDI 336 NRRI+ Sbjct: 268 NRRIEF 273 >gi|311108875|ref|YP_003981728.1| OmpA family protein 4 [Achromobacter xylosoxidans A8] gi|310763564|gb|ADP19013.1| OmpA family protein 4 [Achromobacter xylosoxidans A8] Length = 264 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 76/243 (31%), Gaps = 16/243 (6%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG--------KD 156 + +V + G L+ QQ N + + G + Sbjct: 23 TVVPANVIPQPGQVVASGAVPDEATKADVLARLQQVYGVGNVIDQIDVGGVVAPPNWSEH 82 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + K + ++ + Q +A +++L+ V Sbjct: 83 IGKLIGQPLKQINRGQLEIDGTQIRLRGEVQNEASRQQIASAFATSLNPTYKIVNGLRVS 142 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDAS 275 G+L ++ R F+ S+ +L K+ +V+ ++ + I GHTD+ Sbjct: 143 ASKDEQGLLDQVLTNR-VVEFETGSATLTTRGRELLDKVADVVPKLHSDKVQIIGHTDS- 200 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333 N LS RA + L+ G+ R + G + + + NRR Sbjct: 201 --SGSRSTNLALSQARADAVKTYLVDKGLPPARFETL-GAGPDQPLATNATAEGRAKNRR 257 Query: 334 IDI 336 I+ Sbjct: 258 IEF 260 >gi|258626412|ref|ZP_05721259.1| putative lipoprotein [Vibrio mimicus VM603] gi|258581464|gb|EEW06366.1| putative lipoprotein [Vibrio mimicus VM603] Length = 223 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 12/146 (8%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + D+ V+ V + + + N F SS L+ + Sbjct: 84 DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSSSYQLDSYIHKTLRGVA 138 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + + GHTD++ N LS RA S L+ GV+ R G Sbjct: 139 RILVAYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRAFLLSQGVAAGRAIA-RGN 194 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 +++ NRR++I + Sbjct: 195 GERFPLCSNNTAEGRACNRRVEIQIL 220 >gi|291558208|emb|CBL35325.1| Flagellar motor protein [Eubacterium siraeum V10Sc8a] Length = 339 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 14/196 (7%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIV 212 + + + N PP ++ ++ + L ++ S L +++ Sbjct: 59 NPFVMDEQPKNNAADTNGNAEAPPNTQNGGTTSEQTEGLPSDFNQLYSFLKTTTDKNDLG 118 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIR 269 + V E T T I I NT MFD +S++ E VL K + + S+ Sbjct: 119 QYVYIEQTPTRIFIRFN---NTIMFDGNSAVLKEEGKQVLNKFMPGIKAVNKYIKSCSVS 175 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN 328 GHT + ++W LS RA S + + V ++ + G A + + Sbjct: 176 GHTAKAV---SDVNDWDLSAARASSVVKYMDYNRCVDSEKF-TVEGKACYTPIADNSTAE 231 Query: 329 SA--NRRIDILVEDRQ 342 NRR++I++ Q Sbjct: 232 GRAANRRVEIMIVRAQ 247 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 11/109 (10%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 ++ G+W YAD +T+L+ FF++++ ++ D+ + I Q F G + Sbjct: 3 KRRAESGEEKGNWLDTYADMVTLLLCFFVLLYSASSVDETKWQYIYQSFTSSGSYI---- 58 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 NP Q K + + + + + G T ++ + Sbjct: 59 -------NPFVMDEQPKNNAADTNGNAEAPPNTQNGGTTSEQTEGLPSD 100 >gi|83717470|ref|YP_438322.1| hypothetical protein BTH_II0120 [Burkholderia thailandensis E264] gi|257141351|ref|ZP_05589613.1| hypothetical protein BthaA_19409 [Burkholderia thailandensis E264] gi|83651295|gb|ABC35359.1| unnamed protein product; Similar to putative exported protein [Burkholderia thailandensis E264] Length = 558 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 8/110 (7%) Query: 236 MFDKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F + P + +LA+ + + I GH+D+ N +LS RA Sbjct: 441 LFATGQATFSPGAAQRELQHALRMILANPEQRVLIVGHSDS---AGSDAVNLQLSKARAR 497 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + + GV + R + G + + NRR++IL+ Sbjct: 498 AIRDWFVDQGVLKTRFI-VQGAGDTHPVADNASPLGRAQNRRVEILLIPD 546 >gi|254249905|ref|ZP_04943225.1| Outer membrane protein [Burkholderia cenocepacia PC184] gi|124876406|gb|EAY66396.1| Outer membrane protein [Burkholderia cenocepacia PC184] Length = 221 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 7/118 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 +I ++ +F + P L ++ A T +++ G TD+ Sbjct: 107 VIERVNLSGDALFATDHATLAPTARESLDRLLSERADRTYSQVTVTGFTDSV---GSDDY 163 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 N LS RA + L G+ D + +SG ++ NRR++I ++ Sbjct: 164 NLALSKRRAEAVAAYLKAHGLKTDSM-TVSGRGKADPVASNATPEGRASNRRVEIRLQ 220 >gi|310780073|ref|YP_003968405.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926] gi|309749396|gb|ADO84057.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926] Length = 216 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 F SS VL + +L + + GHTD + N RLS + Sbjct: 107 PGNLTFRTGSSDINSGFYDVLDSVATILVEYKDTTIFVSGHTDNT---GSLATNQRLSQE 163 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA S + L GV RIS GF + ++ + NRR++I + Sbjct: 164 RANSVGRYLSSRGVLSSRISS-QGFDYQFPIASNSTASGREQNRRVEIEITGTN 216 >gi|221210851|ref|ZP_03583831.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] gi|221169807|gb|EEE02274.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] Length = 214 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + A++ +++ K + L+G +A R ++ I + Sbjct: 42 QLTSKLEEAVRARQQEAQQRKTLEQALAGPLAAG----------RVTLVNGRIGIAGNLL 91 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S P+ +L+ + L +++ + G D R DNW LS Sbjct: 92 FALNSDQLQPDGRELLKTLAGPLAAYLKTRDQILMVSGFADDQQVRAGNRMFADNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +GV + + F + ++ D + NRR++I Sbjct: 152 KRALTVTRALIDAGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199 >gi|126734944|ref|ZP_01750690.1| OmpA family domain protein [Roseobacter sp. CCS2] gi|126715499|gb|EBA12364.1| OmpA family domain protein [Roseobacter sp. CCS2] Length = 220 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 71/205 (34%), Gaps = 10/205 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + + +++++G + + + ++ ++ + Sbjct: 21 AACDPAGPNQNQNTQQGALIGAGAGAVLGALTNNDGSVRERNQAALIGAALGAGVGAGVG 80 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + V + + + + +F +S+ L+ + Sbjct: 81 NSLDRQAEDLRRQLRNDVGVSNNGRDLRVVLSEDL---LFATNSTQLSGTAQRELRIVAN 137 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +++ GHTD A N LS RA + VL+ GVS +RI I G Sbjct: 138 SLQQYPDSTVNVIGHTDNV---GEASFNQGLSERRASAVSSVLVGGGVSRNRIRTI-GAG 193 Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339 + + + ANRR++I++ Sbjct: 194 ENNPVASNLNAAGRQANRRVEIVIT 218 >gi|110598524|ref|ZP_01386793.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031] gi|110339828|gb|EAT58334.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031] Length = 170 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 FD SS E L++ E L +++ + I GH D+ A N L R Sbjct: 65 GDVFFDFDSSTLGTEAQGQLKQNSEWLGSNTAKGALIEGHCDSR---GTAEYNLALGERR 121 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVE 339 A +A + L+K GV+ R+ +S + R +D + NRR +++ Sbjct: 122 AATAKEYLVKLGVAASRLESVS-YGEERPFDAAQNDEAWAKNRRAHFVIK 170 >gi|127511841|ref|YP_001093038.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4] gi|126637136|gb|ABO22779.1| OmpA/MotB domain protein [Shewanella loihica PV-4] Length = 224 Score = 92.7 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N F S+ VL + Sbjct: 82 YMDVQEAELRKQLQSTGVSVTRNGDNIILNM---PNEVTFGVDQSVLSSRAKNVLDSVAL 138 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V E ++++ G TD+ N RLS RA LM + RIS + G Sbjct: 139 VAKEYDETMLNVMGFTDS---SGSESYNLRLSQVRAAEVANYLMSREIKSQRISSV-GMG 194 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 R + + NRR++I++ Sbjct: 195 ESRPIADNSTQQGRAQNRRVEIVL 218 >gi|315186462|gb|EFU20222.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578] Length = 395 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 12/149 (8%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +K+ + + D + ET+ G+ I + F S++ LPE L+KI Sbjct: 254 REKVREEVEAAIEDLQIPDAEVETSEEGVTIRL----ENIQFPPDSAVLLPEEQEKLRKI 309 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS-EDRISKIS 313 ++L+ E + GHT LS++RA + LMK GV ++I I Sbjct: 310 AQILSRYPERDLLVEGHT---ALAGTPEGRLALSIERAKAVADFLMKLGVRRPEQIV-IQ 365 Query: 314 GFAHHRLKIASDPM--NSANRRIDILVED 340 G+ R + S NRR++I + + Sbjct: 366 GYGATRPIADNATEAGRSRNRRVEITILE 394 >gi|325286251|ref|YP_004262041.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324321705|gb|ADY29170.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 701 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 93/277 (33%), Gaps = 19/277 (6%) Query: 80 SKGIFDEQNPPERSSQNKIDLS--IDEHITKN-SVDLKIGSTNQKKQYQRLENNIFYLSN 136 +G D N + + NK D S I+E K + G Y + ++ Sbjct: 427 EEGFKDVVNVGQPINSNKDDFSYIINEETQKGYFASNRKGGKGDDDIYSFKNLIVEEVNE 486 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + +T D + + + + E + + + K + Sbjct: 487 NAIAGVVTEIVTGDLMPNALVTLLDENNIKLKEIVTEEDGSFVFEDLDSNTKYKLQANKE 546 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIID-----QRNTPMFDKSSSIPLPETIVV 251 L+ +N V V + +I+I + + FD S + V Sbjct: 547 TFFDEELNTATKENQVVNVDIAMRKLHDMIAIENGIKKLKTEKIFFDFDKSYIRQDASVE 606 Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L K+ +V+ + I HTD R N LS RA S + ++ G+ E+RI Sbjct: 607 LDKLVDVMTEYPNMKIKIESHTD---VRGNNAYNKYLSDKRAKSTRKYIISKGIDENRII 663 Query: 311 KISGFAHHRLKIASD-------PMNSANRRIDILVED 340 G+ +L + + NRR + ++ + Sbjct: 664 SAIGYGEEQLINGCEDGVNCSREKHQENRRSEFIIVE 700 >gi|325279362|ref|YP_004251904.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324311171|gb|ADY31724.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712] Length = 235 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N +F + S P + L K L +S + +I GHTD + N R+S + Sbjct: 114 DNGILFATNKSELSPASREALTKFATSLKNSPDTDVTIYGHTDNT---GTRAVNERISKE 170 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 RA + L+ G+S R++ G A + + + NRR++I + Sbjct: 171 RADAVANFLVGQGISRSRLTT-EGLAFDQPVADNSTAEGRAQNRRVEIYITA 221 >gi|228941688|ref|ZP_04104235.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228817900|gb|EEM63978.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 153 Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 12/153 (7%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 ++ L KKI ++ + + T G++++I++ +FD + E++ + Sbjct: 1 MKALQKKIDQYINE---KQLSSSFQTKLTEKGLMVTILEN---ILFDSGKADVKLESLGI 54 Query: 252 LQKIGEVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG-VSEDR 308 +++ +L + S I++ GHTD P N NW LS RA + QVL+++ + ++ Sbjct: 55 AKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEK 114 Query: 309 ISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 S I G+ +R +D + NRR+++ + Sbjct: 115 FSAI-GYGEYRSIAPNDTQEGKAKNRRVEVFIL 146 >gi|254787334|ref|YP_003074763.1| peptidoglycan-associated lipoprotein [Teredinibacter turnerae T7901] gi|237684812|gb|ACR12076.1| peptidoglycan-associated lipoprotein [Teredinibacter turnerae T7901] Length = 166 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD SI + L EVL + + + + GH D N L RA + Sbjct: 67 FDFDQSILRADARSALMVYAEVLKAAPKSVRLEGHADER---GTREYNMALGERRANAVR 123 Query: 297 QVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILV 338 L+ GV I +S + R +S+ + NRR++I++ Sbjct: 124 DFLILQGVDSSLIETVS-YGEERPAQMGSSESSWAMNRRVEIVL 166 >gi|86133789|ref|ZP_01052371.1| OmpA family protein [Polaribacter sp. MED152] gi|85820652|gb|EAQ41799.1| OmpA family protein [Polaribacter sp. MED152] Length = 279 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 81/225 (36%), Gaps = 10/225 (4%) Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 +++ R + NS + ++ + + +K + K Sbjct: 45 QEEIDRRVEMYYDKINSLKDDNANLEEENALKFDVNSDNIVISDKGRAIMDATLAKVDPK 104 Query: 181 EKILAMKRKKRLQ-DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + A K L L+ I + G + + T ++IS+ D+ +F+ Sbjct: 105 KLAEAKTLKDSLNLALSYNIITQTLGEAELLNSDELDIDIDETVVMISVSDKL---LFNT 161 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQ 297 S + ++ KI ++ I I GHTD+ N +DNW LS+ RA S + Sbjct: 162 GSYRVKESALSLITKIADIAESEPSIDIMIEGHTDSQSISNATVQDNWDLSVKRATSIVR 221 Query: 298 VLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 +L + R+ SG + + + NRR I++ Sbjct: 222 LLQNKFKIDGSRLIA-SGRGDTVPLLPNTSSENRAKNRRTRIVIL 265 >gi|85704170|ref|ZP_01035273.1| flagellar motor protein [Roseovarius sp. 217] gi|85671490|gb|EAQ26348.1| flagellar motor protein [Roseovarius sp. 217] Length = 563 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 69/192 (35%), Gaps = 16/192 (8%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 +S+ E N L ++ E+ ++ L + L ++ + + G+ Sbjct: 373 QSLGNELNTALARVAAEERRRRIAEEERARLLEAEKEDLEKYRSEFFGRLRDVLGQQEGV 432 Query: 225 LI--SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDA 274 I + +F + + K+ +L + V+ + GHTD Sbjct: 433 QIVGDRFVFSSEVLFAPGEAELSLAGEGEIAKVAGILRNVIGDIPEGIDWVLQVDGHTDD 492 Query: 275 SPF--RNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNS 329 P DNW LS RA S + L G +R+S +G+ + D + Sbjct: 493 VPIVEGARFADNWALSQARALSVVRYLTGVLGFPAERLSA-NGYGEFQPVNPDDTAAARA 551 Query: 330 ANRRIDILVEDR 341 NRRI++ + R Sbjct: 552 QNRRIELKLTTR 563 >gi|148652191|ref|YP_001279284.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1] gi|148571275|gb|ABQ93334.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1] Length = 403 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 10/126 (7%) Query: 216 LFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 + + + + I D+ + FD S+ + + K+ E + SI GH Sbjct: 260 VVDENGCPVQVQIDDELKMELRVFFDNDKSVIKEQYKPEIAKVAEKMREYPNSSASIEGH 319 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA 330 + AR N RLS RA + +L GV+ +R+S + G+ + R +D Sbjct: 320 ASKTGP--SARYNQRLSEARAIAVKTMLTNEFGVAPNRLSTV-GYGYDRPIAPNDTEEGR 376 Query: 331 --NRRI 334 NRR+ Sbjct: 377 AMNRRV 382 >gi|88705612|ref|ZP_01103322.1| conserved hypothetical protein, secreted [Congregibacter litoralis KT71] gi|88700125|gb|EAQ97234.1| conserved hypothetical protein, secreted [Congregibacter litoralis KT71] Length = 181 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ S+ P + +L + + + GHTD N L RA + Sbjct: 83 FEFDSATLTPAAQAAVDAHIALLKTNDRSVRLDGHTDER---GTRDYNMALGERRANAVR 139 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 ++ +GV+ RI +S + + + + S NRR+++ Sbjct: 140 DYMVVNGVASYRIETVS-YGEEQPVAYGSGESSWSQNRRVEL 180 >gi|46201868|ref|ZP_00208284.1| COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Magnetospirillum magnetotacticum MS-1] Length = 262 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 8/122 (6%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIAR 282 I+ + N FD S L V+ I +++ + I + GHTD+ Sbjct: 13 QIARVSFSNQIFFDSDSDRILKSGESVIGAISRLISADQTKPHIMVIGHTDS---SGGDL 69 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 N LS RA + L+ GV + I + G + ++ + NRR++ L+ Sbjct: 70 YNLELSRRRAEAVAAQLVLQGVPHEHIQLV-GMGKSQPVASNSTAAGKAQNRRVEFLISA 128 Query: 341 RQ 342 R+ Sbjct: 129 RR 130 >gi|262281579|ref|ZP_06059357.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202] gi|262256955|gb|EEY75695.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202] Length = 159 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 +FD +++ L ++ L + I GHTD A N +LS + Sbjct: 52 PERLLFDFNNAELKQSHEAELVRLASQLNKYDLNKLKIVGHTDDV---GDAAYNQKLSEE 108 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA S + + G ++ I + G + + + + NRR+ I+V Sbjct: 109 RAQSVANLFLARGFKQENIY-VIGRGSTQPYVPNTTNENRAINRRVAIVV 157 >gi|260898695|ref|ZP_05907191.1| flagellar motor protein MotB [Vibrio parahaemolyticus Peru-466] gi|308086893|gb|EFO36588.1| flagellar motor protein MotB [Vibrio parahaemolyticus Peru-466] Length = 155 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 42/150 (28%), Gaps = 11/150 (7%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 D P L W +AD M++LM FF+++ + D K I Sbjct: 6 NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSM----------- 54 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K F QN E K I + + ++ + + + Sbjct: 55 KFAFGVQNQLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTMDITQQTLEFHEGESDR 114 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 G+ ST +S + Sbjct: 115 AGGTKRDEGKLTGGQSPETSTQSNQSAESD 144 >gi|117620195|ref|YP_854667.1| putative outer membrane lipoprotein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561602|gb|ABK38550.1| inner membrane lipoprotein YiaD [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 218 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV +++++ N FD SS+ L + Sbjct: 78 YMDVQEAKLREKLQGTGVSVTRNGDQLILNM---PNNVTFDSSSAQLKAAGANTLSGVAM 134 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V+ + ++ GHTD++ N +LS RA + L+ GV+ RIS SG Sbjct: 135 VVGEFDKTRLNVVGHTDST---GSRELNMKLSAQRADAVAAQLIGQGVTGSRIST-SGVG 190 Query: 317 HHRLKIASDPMN--SANRRIDILVE 339 + + + NRR+ I + Sbjct: 191 PDQPVATNSTAEGKAQNRRVTITLT 215 >gi|317486290|ref|ZP_07945122.1| OmpA family protein [Bilophila wadsworthia 3_1_6] gi|316922460|gb|EFV43714.1| OmpA family protein [Bilophila wadsworthia 3_1_6] Length = 340 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F PE +L + ++ + + G TD+ N +LS RA + Sbjct: 239 FAFDKYDLTPEAQGILNEAARIIMEHPNMKVQLLGWTDSI---GTDAYNLKLSQRRADAV 295 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L+ GV R+ I G + ++ NRR +++ D Sbjct: 296 KNYLVAQGVPASRMIAI-GKGKSF-RYDNNTEEGRYMNRRTELVFMD 340 >gi|315223432|ref|ZP_07865289.1| OmpA family protein [Capnocytophaga ochracea F0287] gi|314946605|gb|EFS98596.1| OmpA family protein [Capnocytophaga ochracea F0287] Length = 290 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 9/156 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 R + + +L G++ + + V + + I+I D+ +F S Sbjct: 117 RRDSVNLALVQSLKGVLGNLDDQDVDIRVEKGVVFINISDKM---LFSSGSYTISKNAKS 173 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKS-GVSED 307 VL+K+ +V+ + + + GHTD + RDNW LS+ RA +VL K GV+ + Sbjct: 174 VLEKVAKVVKNKPDFEFMVEGHTDNVNIKTSCIRDNWDLSVMRATEIVRVLQKDFGVAPE 233 Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 R++ G +++ ++ + NRR I+V + Sbjct: 234 RMTAA-GRSYYVPLASNGDANGRALNRRTRIVVLPK 268 >gi|262402450|ref|ZP_06079011.1| outer membrane protein [Vibrio sp. RC586] gi|262351232|gb|EEZ00365.1| outer membrane protein [Vibrio sp. RC586] Length = 223 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 12/146 (8%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + D+ V+ V + + + N F SS L+ + Sbjct: 84 DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSSSYQLDSYIHKTLRGVA 138 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + + GHTD++ N LS RA S L+ GV+ R G Sbjct: 139 RILVEYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRAFLLSQGVAAGRAIA-RGN 194 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 ++ NRR++I + Sbjct: 195 GERFPLCSNSTAEGRACNRRVEIQIL 220 >gi|152993615|ref|YP_001359336.1| hypothetical protein SUN_2037 [Sulfurovum sp. NBC37-1] gi|151425476|dbj|BAF72979.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 232 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 68/159 (42%), Gaps = 13/159 (8%) Query: 189 KKRLQDLAKKISSTLSGLVADNI--VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 ++ D+A+ + + ++ + + ++ + I D+ MF SS Sbjct: 74 DQQANDIARSLGTGVNNDPLAYLDPNQDLIVSNNGRYVKIMFRDRM---MFPTGSSRLTS 130 Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + K+G++L + I + G TD N+RLS +RA + L + G++ Sbjct: 131 SASYKVGKVGKILREYPQTIVQVAGFTDDR---GGYDYNYRLSRNRAKTVSDRLYREGIN 187 Query: 306 EDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 S ++G ++++ + ++ + NRR++I + Sbjct: 188 NP--SYVTGCSYNKPLVPNNSERNMALNRRVEIYLYPNN 224 >gi|329900833|ref|ZP_08272601.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium IMCC9480] gi|327549361|gb|EGF33931.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium IMCC9480] Length = 214 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + P+ L + L + I GHTD+ N +LS+ R+ + L+ Sbjct: 114 VLKPDGKAKLDDLASKLQGMNLEVIIAVGHTDSV---GSDAYNQKLSVRRSEAVKAYLVS 170 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 G+ +R+ G + + + NRR++I V + Sbjct: 171 KGIEANRVYT-EGKGEKQPVADNKSAAGRAKNRRVEIEVVGTR 212 >gi|218886501|ref|YP_002435822.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757455|gb|ACL08354.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 194 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 59/167 (35%), Gaps = 15/167 (8%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 +++ + A ++ D + + + Sbjct: 40 AGGAEQSLAAANESTQVTDRPAPPRVMPQQEIDRVFGSTLAAMPEPP--------KSFLL 91 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S+ P P + L + + + +S+ GH+D+ N +LS+ RA + Sbjct: 92 YFPTGSTEPEPTSRPALDEAADNIKCRAVSNVSVIGHSDS---AGDPAANQKLSMARAEA 148 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 ++L GV + +SG + + + P + NRR++ILV Sbjct: 149 VRRMLEARGVPAGAM-ALSGHGANDPLVPTAPGVAEARNRRVEILVR 194 >gi|120602698|ref|YP_967098.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4] gi|120562927|gb|ABM28671.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4] gi|311234162|gb|ADP87016.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1] Length = 344 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 49/150 (32%), Gaps = 13/150 (8%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L + K + + + D I++ F +S+ Sbjct: 202 ADLLNNEKALDKFVRDVFYDEQAPKAAAAPMEEVIVLR------NVQFALNSAKLDASAT 255 Query: 250 VVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + ++ + + GHT N +LS RA S L+K GV R Sbjct: 256 SILTEAARIIKANPGKKLLVAGHTCNL---GTDAYNLKLSDARAKSVKDFLVKQGVEASR 312 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDI 336 + GF + K + NRR+++ Sbjct: 313 LDTF-GFGESQPKYDNGTEQGRSMNRRVEL 341 >gi|152996565|ref|YP_001341400.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1] gi|150837489|gb|ABR71465.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1] Length = 209 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 58/168 (34%), Gaps = 8/168 (4%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + E + A + RL D + L + ++ +FD Sbjct: 22 AAESLYASNVQSRLADADRDGVIDARDLCPGTTEGAAVDNYGCPNQTTKLLSVELNILFD 81 Query: 239 KSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + L+ + + L + I GHTD+ A N LS RA + Sbjct: 82 TGKADIKQRFYSELKDLAKFLKEHPASTVVIEGHTDSQ---GSAELNQELSQQRASAIAD 138 Query: 298 VLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 VL+ S + DR+ I G+ R +D + NRR+ V +Q Sbjct: 139 VLVDSFRIQADRVKGI-GYGATRPIADNDTEDGRKLNRRVVAEVFAKQ 185 >gi|297748730|gb|ADI51276.1| Peptidoglycan-associated lipoprotein [Chlamydia trachomatis D-EC] gi|297749610|gb|ADI52288.1| Peptidoglycan-associated lipoprotein [Chlamydia trachomatis D-LC] Length = 202 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETI-VVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S E +L + L + I GHTD A N L RA + Sbjct: 98 FATDSYSIKGEDNLTILASLVRHLHKSPKATLYIEGHTDER---GAAAYNLALGARRANA 154 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 Q L+K G++ DR+ IS + ++ NRR + + R Sbjct: 155 VKQYLIKQGIAADRLFTIS-YGKEHPVHPGHNELAWQQNRRTEFKIHAR 202 >gi|262369124|ref|ZP_06062453.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262316802|gb|EEY97840.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 216 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 51/144 (35%), Gaps = 9/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV G + I+ FD + S P L K+ + Sbjct: 75 YLDNKEKKLRQQMAGTGVEVNRNPDGSVGLIM--PGNITFDTNKSNIKPNFYSTLNKVAQ 132 Query: 258 VL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + I + G+TD++ N LS RA S L GVS RI+ G Sbjct: 133 TLTEDNKSGILVTGYTDST---GNDSINIPLSQARAQSVASYLASQGVSTTRINA-QGQG 188 Query: 317 HHRLKIASDPMNSA--NRRIDILV 338 ++ NRR++I + Sbjct: 189 SANPIASNATAEGREQNRRVEISI 212 >gi|167614763|ref|ZP_02383398.1| unnamed protein product; Similar to putative exported protein [Burkholderia thailandensis Bt4] Length = 560 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 8/110 (7%) Query: 236 MFDKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F + P + +LA+ + + I GH+D+ N +LS RA Sbjct: 443 LFATGQATFSPGAAQRELQHALRMILANPEQRVLIVGHSDS---AGSDAVNLQLSKARAR 499 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + + GV + R + G + + NRR++IL+ Sbjct: 500 AIRDWFVDQGVLKTRFI-VQGAGDTHPVADNASPLGRAQNRRVEILLIPD 548 >gi|270047795|pdb|3KHN|A Chain A, Crystal Structure Of Putative Motb Like Protein Dvu_2228 From Desulfovibrio Vulgaris. gi|270047796|pdb|3KHN|B Chain B, Crystal Structure Of Putative Motb Like Protein Dvu_2228 From Desulfovibrio Vulgaris Length = 174 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 64/159 (40%), Gaps = 9/159 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +++ ++ + + + + + + I + + + +F + P Sbjct: 9 QRELIEAQRQTYNEXRTYFTVNGVEGVIGAVFDEGVITLRV---PSEVLFAPGAVELAPG 65 Query: 248 TIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLMKSGV 304 VL + + + + I+I+G TD AR DNW +S R+ + + + +G+ Sbjct: 66 ADRVLATLKDLFIRRREQNINIKGFTDDVQPSANARFKDNWEVSALRSVNVLRYFLGAGI 125 Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 R++ +G + D + NRR++ ++E R Sbjct: 126 EPARLTA-TGLGELDPLFPNTSDENRARNRRVEFVLERR 163 >gi|170723153|ref|YP_001750841.1| peptidoglycan-associated lipoprotein [Pseudomonas putida W619] gi|169761156|gb|ACA74472.1| peptidoglycan-associated lipoprotein [Pseudomonas putida W619] Length = 165 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 66 FEYDSSDLKPEAMRALDVHAKDLKSNGNRVVLEGNTDER---GTREYNMALGERRAKAVQ 122 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 163 >gi|194014658|ref|ZP_03053275.1| chemotaxis protein MotB (Motility protein B) [Bacillus pumilus ATCC 7061] gi|194013684|gb|EDW23249.1| chemotaxis protein MotB (Motility protein B) [Bacillus pumilus ATCC 7061] Length = 254 Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 81/206 (39%), Gaps = 10/206 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 +Q N + D E++ N + +E + L + K Sbjct: 48 EQMAKSFNVVFTGGTGVMDQTSMQSTEETENSNQTKKAAEEDEEAQAKARDHAVLTKVKK 107 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 ++ S ++ + + + T G+LI+I D FD +I P+ + + ++I + Sbjct: 108 QVDSFIAN---KKLGAKLETKLTDEGLLITIEDS---IFFDSGRAIIRPQDVPLAKEISK 161 Query: 258 VLAHSTEVISI-RGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + + GHTD P RN NW LS RA + +L+++ GF Sbjct: 162 LLVINPARDIVISGHTDNVPIRNSEFESNWYLSAIRAVNFLSILLENSNLNQENFSTKGF 221 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 + ++D NRR+++L+ Sbjct: 222 GEFKPIASNDTAEGRSKNRRVEVLIL 247 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + +K+ D + SW I YAD +T+L+A F+V++ ++ D + + + FN Sbjct: 1 MARKRKKHDHDDHVDESWLIPYADLLTLLLALFIVLFASSSIDAAKYEQMAKSFN----V 56 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLS 101 + T G+ D+ + + + Sbjct: 57 VFTGGTGVMDQTSMQSTEETENSNQT 82 >gi|288818260|ref|YP_003432608.1| hypothetical protein HTH_0948 [Hydrogenobacter thermophilus TK-6] gi|288787660|dbj|BAI69407.1| hypothetical protein HTH_0948 [Hydrogenobacter thermophilus TK-6] gi|308751857|gb|ADO45340.1| OmpA/MotB domain protein [Hydrogenobacter thermophilus TK-6] Length = 334 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 93/275 (33%), Gaps = 10/275 (3%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F ++ + + N ++ L ++ + G + + + + Sbjct: 63 FLASEQDGIGSKMFAIKSMNSASKALGGLKGLDSLNLLSHQEFEKLTGLSIAEVNERLMY 122 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + E K + D+ + + + + + L ++ L Sbjct: 123 LRENKGESCAPKELAKAEVAYDALVYEASKEQINQMVLLKLYNDAVNNSLLAKEKLDSAI 182 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + +L+ K+ ++ + + + + + + + FD E Sbjct: 183 ESKLECYTGKVELPVALKEEPKEQEEKVEKKMPQEEPLMVSARIH---FDFDKYSIKREY 239 Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 I +L ++ + L + + I G+TD N +L++ RA + L+K G+ E Sbjct: 240 IPLLNEVVKTLKENPNVRVRIEGYTDNI---GTKAYNDKLAMKRAKAVKDYLVKHGIEES 296 Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 RI + GF R +++ NRR D ++ Sbjct: 297 RIDTV-GFGKERYIASNETAIGRFTNRRADFIILR 330 >gi|33598186|ref|NP_885829.1| putative outer membrane protein [Bordetella parapertussis 12822] gi|33566744|emb|CAE38956.1| putative outer membrane protein [Bordetella parapertussis] Length = 208 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 10/126 (7%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + E + ++I + FD S P + VL + L E + GHTD+ Sbjct: 85 VVEMPDGSLKVNI---PSNVSFDTDKSQLKPALLPVLDSVARALNQHPELRTKVVGHTDS 141 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 + A N +LS++RA + L K GV++ R+ + G + + NR Sbjct: 142 T---GSAAHNQQLSVNRARAVTSYLGKQGVAQGRM-TVEGRGANDPVGDNATAEGRAANR 197 Query: 333 RIDILV 338 R+++ + Sbjct: 198 RVEVYL 203 >gi|320352974|ref|YP_004194313.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320121476|gb|ADW17022.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032] Length = 359 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 N +FD + PE L ++G +L + V + G D+ N RLS R Sbjct: 250 NNILFDFDKAFIRPEHHAQLDQLGRLLVANPHVYVVLSGFCDSL---GSEAYNIRLSQRR 306 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 A S + L K + +DRI + + + ++ NRR+ I++ + Sbjct: 307 AESVRRYLQKKFTIKKDRIL-LYWYGYANPVASNATEEGRQLNRRVTIVLRGTR 359 >gi|187929080|ref|YP_001899567.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12J] gi|187725970|gb|ACD27135.1| OmpA/MotB domain protein [Ralstonia pickettii 12J] Length = 167 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 10/162 (6%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + L+ + K+ + L+++I+ L+ + V T I IS F Sbjct: 2 EALSAQLAKQRESLSERIARALAP---EAGAAPVGISTKDDRIYISFNSDEG---FASGR 55 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLM 300 + + L ++ VLA + +++ GHTD +P N LS RA + + L Sbjct: 56 ADLMLMLARQLDRLATVLADTRGKVTVLGHTDDAPGPRDRMESNLALSTARATAVARHLQ 115 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 + G++ DR+ I G + NRR++I++E Sbjct: 116 ERGIASDRL-SIIGRGVKDPVGDNRTAAGRALNRRVEIILES 156 >gi|91779292|ref|YP_554500.1| hypothetical protein Bxe_B0804 [Burkholderia xenovorans LB400] gi|91691952|gb|ABE35150.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans LB400] Length = 215 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +K+++ K + L+G +A R ++ I + Sbjct: 43 ELSSKLEQEVKQRQLETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGNVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S P+ +L+ + L + E++ + G TD R DNW LS Sbjct: 93 FALNSDQLQPQGRDLLKSLAGPLSAYLRANDEILMVSGFTDDQRLREGNRRFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ GV + + F + ++ + + NRR++I Sbjct: 153 QRALTVTRALIDDGVPASSLFAAA-FGSGQPVSSNADEQGRARNRRVEI 200 >gi|78223039|ref|YP_384786.1| OmpA/MotB [Geobacter metallireducens GS-15] gi|78194294|gb|ABB32061.1| OmpA/MotB [Geobacter metallireducens GS-15] Length = 523 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 81/281 (28%), Gaps = 19/281 (6%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERS-SQNKIDLSIDEHITKNSVDLKIGSTNQK 121 + + Y P + ++ P + I + + + K+ T + Sbjct: 249 QGVGSYVKPVPRLGQGLDPLDEQKKKEPVKIRKIIPISSLLVSSLAPQAPANKLEVTVEP 308 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + ++ S Q K + E+ ++ + L Sbjct: 309 GKEEITIKPYGQVTISAQPAAAKAVSSATLEEVSLTQGGEEVRLASRVSGTLENSALEYT 368 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 K + ++ +I + ++ FD Sbjct: 369 LARLEGITPLYSVDVKGQNVQVASARDGDIADSMKVYRKFRFPDVT---------FDFDQ 419 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 E + ++ E++ T+ + + G+TD N LSL RA S L Sbjct: 420 WSLSAEGKKSISEVAELVRKDTKWVYLRVDGYTDNI---GSTDYNMDLSLKRAVSVASYL 476 Query: 300 MKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 + G+ +I I G + + + NRR +IL Sbjct: 477 VAREGIDAAKIF-IKGLGKSKPLADNATSDGRKLNRRCEIL 516 >gi|222106979|ref|YP_002547770.1| OmpA-type porin [Agrobacterium vitis S4] gi|221738158|gb|ACM39054.1| OmpA-type porin [Agrobacterium vitis S4] Length = 511 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 72/186 (38%), Gaps = 8/186 (4%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 ++ + ++ E P +++++ K ++ + ++ L + K V Sbjct: 290 PHEAPGVMITVPVPEPQPQPTVAQQEPEPQPVKPPEPPPPSRLKNLITFLQPEVEKKLVS 349 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 + + I N+ +FD S+ + +LQ+IG LA + G+TD P Sbjct: 350 LSDANGRLRVRIN---NSGLFDTGSADVKGQFRDLLQRIGGALAAEKFRAVVIGYTDNVP 406 Query: 277 FRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333 + NW LS RA + ++L + ++ G A +D NRR Sbjct: 407 IKTVQFPSNWHLSEARAKAVGEILSSFTGPDAILT--EGRADSDPIAGNDTPEGREMNRR 464 Query: 334 IDILVE 339 +ILV Sbjct: 465 TEILVL 470 >gi|296156377|ref|ZP_06839215.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] gi|295892976|gb|EFG72756.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] Length = 215 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +K+++ K + L+G +A R ++ I + Sbjct: 43 ELSSKLEQEVKQRQLETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGNVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S P+ +L+ + L + E++ + G TD R DNW LS Sbjct: 93 FALNSDQLQPQGRDLLKSLAGPLSAYLRANDEILMVSGFTDDQRLREGNRRFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ GV + + F + ++ + + NRR++I Sbjct: 153 QRALTVTRALIDDGVPASSLFAAA-FGSGQPVSSNADEQGRAKNRRVEI 200 >gi|284040044|ref|YP_003389974.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283819337|gb|ADB41175.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 668 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 79/299 (26%), Gaps = 10/299 (3%) Query: 48 FLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107 F+ T + + T F N + I + Sbjct: 373 FVATRSGGVTRVENMGQPINSPADDFGLIYTDPTKGFMASNRGGGKGDDDIYFFQEGPSV 432 Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 ++ ++ N K + + + + + + Sbjct: 433 DSTTIVQTPPANAPKIVRYFIAGTVSANETPIVPLDSARVRILDDATGQPIAEATTGQPG 492 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + + + ++ ++ + F + Sbjct: 493 TFGKYPLQEGKDYTILAERRGYLTRREQFTMQGKSIPAIFLTKAQTDTTFNVALLLDRAT 552 Query: 228 IIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + +D P+ L K+ +L + I + HTD R N Sbjct: 553 LNKTFVLENIYYDLDKFNIRPDAAEELDKLVTILKDNPTLKIELSSHTD---VRAPDAYN 609 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS---DPMNSANRRIDILVED 340 RLS +RA SA ++ GV R+ G+ +L + + + + NRR + + + Sbjct: 610 MRLSQNRAKSAVDYIVSKGVDASRMIA-KGYGETQLIVKNAKTEEEHQRNRRTEFKILE 667 >gi|325107821|ref|YP_004268889.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305] gi|324968089|gb|ADY58867.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305] Length = 280 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 79/253 (31%), Gaps = 22/253 (8%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC--KSTDLEKSI 167 ++ +T ++Q + ++ L QQ +N G ++ Sbjct: 16 ALSQTACNTPARRQLKMSQHRAMRLYAEQQMLEQENLQLAGQMHGYQQSMHAMAQERDAL 75 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 ++ L+ + +L + L + Sbjct: 76 GQQLAQAESRLAISRQRLDNLLAERGELQGRYKDLLIKARTQQNPMSNEATRKFQELARK 135 Query: 228 IIDQRNTP-----------MFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTD 273 D P +F S+ +L+ + ++ + + GHTD Sbjct: 136 YPDFEFDPYTGVSKFHADILFSSGSAELRDTAKPLLRDLAAIMNDGDARGLNLLVVGHTD 195 Query: 274 ASPF---RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMN 328 P R NW LS +RA S L SG+SE R+ G++ ++ + +D Sbjct: 196 DQPIASARGTHPTNWHLSTNRANSVVLALKNSGISEHRMGAA-GYSLNQPLVPNTNDHSR 254 Query: 329 SANRRIDILVEDR 341 NRR++I V Sbjct: 255 QRNRRVEIFVLAP 267 >gi|221197269|ref|ZP_03570316.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] gi|221203942|ref|ZP_03576960.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221176108|gb|EEE08537.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221183823|gb|EEE16223.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] Length = 214 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + A++ +++ K + L+G +A R ++ I + Sbjct: 42 QLTSKLEEAVRARQQEAQQRKTLEQALAGPLAAG----------RVTLVNGRIGIAGNLL 91 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S P+ +L+ + L +++ + G D R DNW LS Sbjct: 92 FALNSDQLQPDGRELLKTLAGPLAAYLKTRDQILMVSGFADDQQVRAGNRMFADNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ GV + + F + ++ D + NRR++I Sbjct: 152 KRALTVTRALIDEGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199 >gi|91976354|ref|YP_569013.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] gi|91682810|gb|ABE39112.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] Length = 434 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F++ S+ ++ VL+++ V+AH I + GHTDA N LS RA + Sbjct: 333 FERGSAEIEQASLPVLKQLAAVIAHCPAAQIEVAGHTDA---NGKKAANEALSKRRAEAV 389 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L K+G+ ++ + G+ + +D + NRRI+ V+ Sbjct: 390 ADSLTKAGIGSAKLIAV-GYGSAKPLGPNDTAEARAKNRRIEFAVK 434 >gi|293393749|ref|ZP_06638056.1| OmpA family protein [Serratia odorifera DSM 4582] gi|291423576|gb|EFE96798.1| OmpA family protein [Serratia odorifera DSM 4582] Length = 220 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SS P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDTDSSTLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N LS RA L+ GV+ +RI + G Sbjct: 137 VLKEYPKTAVNVVGYTDST---GARAHNMTLSQQRADGVASALITQGVAANRI-RTQGAG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PDNPIASNSTTEGKAQNRRVEITL 216 >gi|296137072|ref|YP_003644314.1| OmpA/MotB domain protein [Thiomonas intermedia K12] gi|294341249|emb|CAZ89650.1| putative OmpA family protein [Thiomonas sp. 3As] gi|295797194|gb|ADG31984.1| OmpA/MotB domain protein [Thiomonas intermedia K12] Length = 226 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 56/145 (38%), Gaps = 7/145 (4%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L A G + T+T ++ F S+ P +L+ + Sbjct: 80 QHLEKQKQDLQAQAQASGTGVQVTQTQDNRLKMNVPADAGFATGSAQLNPRMYPILESLA 139 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L + E + + G TD + N+ LS +RA + L+ GV+ R++ G Sbjct: 140 TGLNQNPSETVQVFGFTDNT---GTDAINYPLSENRALTVKNFLVSRGVAPQRVTT-QGL 195 Query: 316 AHHRLKIASDPM--NSANRRIDILV 338 ++ +ANRR++I V Sbjct: 196 GPQNPVASNATAQGRAANRRVEIYV 220 >gi|218461676|ref|ZP_03501767.1| flagellar motor protein MotB [Rhizobium etli Kim 5] Length = 75 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 40/74 (54%), Positives = 56/74 (75%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 IRGHTD ++ +NWRLS+DRA SAY +L++ G+ E RIS++SGFA RLK+ ++P Sbjct: 2 IRGHTDGRQYKGAQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPAEPF 61 Query: 328 NSANRRIDILVEDR 341 N+ANRRI+ILV+ Sbjct: 62 NAANRRIEILVQAD 75 >gi|75674700|ref|YP_317121.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255] gi|74419570|gb|ABA03769.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255] Length = 463 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + ++I +L ++ E L T I I GHTD+ A N LS RA + Sbjct: 361 FEAGQATLHLDSIGLLDQLTETALRCQTATIEIVGHTDSD---GDASFNQTLSERRAQAV 417 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 L+K+G+ +R + + G + +D + NRRID +V Sbjct: 418 VDFLVKAGLPANRFTPM-GRGSAQPIATNDTDEGKAKNRRIDFIVRQ 463 >gi|13472147|ref|NP_103714.1| hypothetical protein mlr2348 [Mesorhizobium loti MAFF303099] gi|14022892|dbj|BAB49500.1| mlr2348 [Mesorhizobium loti MAFF303099] Length = 442 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 81/246 (32%), Gaps = 11/246 (4%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 + + + QR I+ ++ + + + + Sbjct: 200 NADAEDAPLSPNWKGVIASDEPQRFIVPIWVMALAAVVVAAVAYIGLSMSLSSQAVELSA 259 Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 L +++ + + ++ + D A + + + Sbjct: 260 LVRTLPPASRADVARAAPKQDAPAPEPPQPVDFALLPAFKAEAPASLKDALSGTESVSLA 319 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPF-- 277 ++I N +F S ++Q I +V+ I+I GHTD Sbjct: 320 KLIIQ---SSNPELFQSSRPTLSQGYEPLIQSIAKVILANQELIGNITIVGHTDNVRLQR 376 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 N N RLS RA + +L+++GV ++RI G A + + NRR++ Sbjct: 377 SNPLASNQRLSEARAQTIADLLVQAGVPQERIHS-EGRADSDPVADNSTREGRALNRRVE 435 Query: 336 ILVEDR 341 +LVE R Sbjct: 436 VLVEKR 441 >gi|115526883|ref|YP_783794.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115520830|gb|ABJ08814.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53] Length = 465 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + +++ +L ++ E + S+ VI I GHTD A N LS RA + Sbjct: 363 FESGKATIDGDSLGLLDRLIETAMRCSSAVIEIAGHTDGD---GEAAANKALSERRAQAV 419 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 ++K+G+ DR + GF + + +D + NRRI+ V Sbjct: 420 VDYMVKAGLPADRFHPV-GFGSAQPVASNDNDEGKAQNRRIEFTVR 464 >gi|167750717|ref|ZP_02422844.1| hypothetical protein EUBSIR_01695 [Eubacterium siraeum DSM 15702] gi|167656396|gb|EDS00526.1| hypothetical protein EUBSIR_01695 [Eubacterium siraeum DSM 15702] Length = 339 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 14/196 (7%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIV 212 + + + N PP ++ ++ + L ++ S L +++ Sbjct: 59 NPFVMDEQPKNNAADTNGNAEAPPNTQNGGTTSEQTEGLPSDFNQLYSFLKTTTDKNDLG 118 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIR 269 + V E T T I I NT MFD +S++ E VL K + + S+ Sbjct: 119 RYVYIEQTPTRIFIRFN---NTIMFDGNSAVLKEEGKQVLNKFMPGIKAVNKYIKSCSVS 175 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN 328 GHT + ++W LS RA S + + V ++ + G A + + Sbjct: 176 GHTAKAV---SDVNDWDLSAARASSVVKYMDYNRCVDSEKF-TVEGKACYTPIADNSTAE 231 Query: 329 SA--NRRIDILVEDRQ 342 NRR++I++ Q Sbjct: 232 GRAANRRVEIMIVRAQ 247 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 11/109 (10%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 ++ G+W YAD +T+L+ FF++++ ++ D+ + I Q F G + Sbjct: 3 KRRAESGEEKGNWLDTYADMVTLLLCFFVLLYSASSVDETKWQYIYQSFTSSGSYI---- 58 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 NP Q K + + + + + G T ++ + Sbjct: 59 -------NPFVMDEQPKNNAADTNGNAEAPPNTQNGGTTSEQTEGLPSD 100 >gi|15605330|ref|NP_220116.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis D/UW-3/CX] gi|76789338|ref|YP_328424.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis A/HAR-13] gi|166154814|ref|YP_001654932.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 434/Bu] gi|166155689|ref|YP_001653944.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|237803028|ref|YP_002888222.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis B/Jali20/OT] gi|237804949|ref|YP_002889103.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis B/TZ1A828/OT] gi|255311421|ref|ZP_05353991.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 6276] gi|255317722|ref|ZP_05358968.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 6276s] gi|255348981|ref|ZP_05380988.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 70] gi|255503520|ref|ZP_05381910.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 70s] gi|255507198|ref|ZP_05382837.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis D(s)2923] gi|301336092|ref|ZP_07224336.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis L2tet1] gi|3329044|gb|AAC68202.1| Peptidoglycan-Associated Lipoprotein [Chlamydia trachomatis D/UW-3/CX] gi|76167868|gb|AAX50876.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis A/HAR-13] gi|165930802|emb|CAP04300.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 434/Bu] gi|165931677|emb|CAP07254.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|231273249|emb|CAX10164.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis B/TZ1A828/OT] gi|231274262|emb|CAX11057.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis B/Jali20/OT] gi|289525642|emb|CBJ15123.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis Sweden2] gi|296435206|gb|ADH17384.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis E/150] gi|296436135|gb|ADH18309.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis G/9768] gi|296437063|gb|ADH19233.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis G/11222] gi|296437995|gb|ADH20156.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis G/11074] gi|296438925|gb|ADH21078.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis E/11023] gi|297140497|gb|ADH97255.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis G/9301] Length = 188 Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETI-VVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S E +L + L + I GHTD A N L RA + Sbjct: 84 FATDSYSIKGEDNLTILASLVRHLHKSPKATLYIEGHTDER---GAAAYNLALGARRANA 140 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 Q L+K G++ DR+ IS + ++ NRR + + R Sbjct: 141 VKQYLIKQGIAADRLFTIS-YGKEHPVHPGHNELAWQQNRRTEFKIHAR 188 >gi|289665938|ref|ZP_06487519.1| OmpA family membrane protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 438 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 12/158 (7%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-------RNTPMFDKSSSIP 244 L+ +A I + + + E + + + MF S+ Sbjct: 278 LERVALPIPEAVRPATTPALAPLLAAEQRAGLLTVQTEGDGRSTVRLASASMFPSGSAEL 337 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG 303 + +L+++ L + + GHTD P R+ +DN+ LS RA S VL +G Sbjct: 338 DADQTSLLERVAAALEQVPGRVVVVGHTDDQPVRSLSFKDNFALSARRAESVGAVL-AAG 396 Query: 304 VSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338 + + R + SG + P + NRR++IL+ Sbjct: 397 LRDRRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434 >gi|325287126|ref|YP_004262916.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324322580|gb|ADY30045.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 343 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S ++ V+ +I +++ + E ISI GHTD A N +LS +RA + Sbjct: 242 FDTGKSRIKADSYEVISEISKMMKSNPELKISIEGHTDNV---GDASSNLKLSKNRAQAV 298 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 +++ G++E R+ GF + + + NRR+++ Sbjct: 299 LMAIVEEGINETRLKS-EGFGQTKPLDDNTTEEGKAQNRRVEL 340 >gi|317048731|ref|YP_004116379.1| DotU family type IV / VI secretion system protein [Pantoea sp. At-9b] gi|316950348|gb|ADU69823.1| type IV / VI secretion system protein, DotU family [Pantoea sp. At-9b] Length = 412 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 53/137 (38%), Gaps = 7/137 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V ++++ + +F ++ V+Q+I + + + Sbjct: 263 LKPEIDAGLVAVRDEADQSVVTL---KGDGLFTSGATTVRGRYEAVIQRIAAAMNNVSGK 319 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I + G++D P R+ N+ LSL RA S +L + R+ G + + Sbjct: 320 ILVVGYSDNVPIRSARFASNYELSLARAQSVQTLLQQQLTQPARVKA-EGRGESNPLVPN 378 Query: 325 DPM--NSANRRIDILVE 339 + NRR++I + Sbjct: 379 TSAENRARNRRVEITLL 395 >gi|319955259|ref|YP_004166526.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319423919|gb|ADV51028.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 283 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 80/208 (38%), Gaps = 12/208 (5%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL---QDLA 196 + + + E ++ T L + L L ++ + K + + Sbjct: 63 EDQNAFLKSNNQELINNMGNLTTLSSKGAQNLEKSLESLQEKDLTIRKLNDAITRRDSVN 122 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +L G++ + + + + + +SI D+ +F S VL K+ Sbjct: 123 LSLVQSLKGVLGNLDDEDIQISVEKGVVFVSISDKL---LFSSGSYNVTNRAKEVLGKVA 179 Query: 257 EVLAHSTEV-ISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKIS 313 +V+ + + + GHTD P+ DNW LS RA + ++L V R++ + Sbjct: 180 KVVNNKPDFDFMVEGHTDDVPYNGGILLDNWDLSAKRATAIVRILQNDYNVDPKRMTAAA 239 Query: 314 GFAHHRLKIASDPMNSANRRIDILVEDR 341 + + +D + NRR I+V + Sbjct: 240 -RSSYVPVSTTD--KAKNRRTRIVVLPK 264 >gi|332519230|ref|ZP_08395697.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332045078|gb|EGI81271.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 235 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 8/142 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + G E GI+++ D+ + FD + + L K+ V Sbjct: 86 QAQKIEEEIPGAEVERVDDGIVVTF-DENSGVYFDTAKYNINAASQATLSKLIGVFREYP 144 Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GHTD+ N LS +RAY+ L G+S R++ + F + Sbjct: 145 DTNILVVGHTDSV---GSEDSNMTLSKNRAYAVTNYLTNQGISNARVTT-NWFGEGQPTN 200 Query: 323 ASDP--MNSANRRIDILVEDRQ 342 + + NRR++I + Q Sbjct: 201 DNSTKEGRAKNRRVNIAIVPNQ 222 >gi|262375710|ref|ZP_06068942.1| type VI secretion system OmpA/MotB [Acinetobacter lwoffii SH145] gi|262309313|gb|EEY90444.1| type VI secretion system OmpA/MotB [Acinetobacter lwoffii SH145] Length = 217 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + FD + S P L K+ +VL + I + G+TD++ N LS Sbjct: 108 PGSITFDTNKSNIKPNFYGTLNKVAQVLTEDNQSGILVTGYTDST---GNDSINLPLSQA 164 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S L GVS RI+ G + NRR++I V Sbjct: 165 RANSVATYLAGQGVSRTRINA-QGLGSANPIADNTTAAGKEQNRRVEIAV 213 >gi|70732413|ref|YP_262169.1| OmpA family protein [Pseudomonas fluorescens Pf-5] gi|68346712|gb|AAY94318.1| OmpA family protein [Pseudomonas fluorescens Pf-5] Length = 252 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 49/146 (33%), Gaps = 10/146 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 L A GV + I + + F S+ P L + Sbjct: 86 YADQQEKKLRASMANTGVEVQRQGDQIKLIM---PGNITFATDSANIAPSFYQPLNNLAN 142 Query: 258 VLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + I I G+TD++ + N LS RA S L GVS +S G Sbjct: 143 SLREFNQNQIEIVGYTDST---GSRQHNMDLSQRRAQSVATYLTSQGVSGSNLSA-RGAG 198 Query: 317 HHRLKIASDP--MNSANRRIDILVED 340 ++ + NRR+++ ++ Sbjct: 199 PDNPIASNADVNGRAQNRRVEVNLKA 224 >gi|167565907|ref|ZP_02358823.1| hypothetical protein BoklE_25339 [Burkholderia oklahomensis EO147] Length = 215 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +K+++ K + L+G +A R ++ I + + Sbjct: 43 ELSSKLDAEVKQRQMETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGSVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S P +L+ + L + E++ + G D R DNW LS Sbjct: 93 FALNSDELQPAGRDLLKSLAGPLAAYLKANREILMVSGFADDQQVRAGNHRFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + + GV + + F + + D + NRR++I Sbjct: 153 KRALTVTRAFIAEGVPASSVFAAA-FGSEQPVSPNSDDEGRAKNRRVEI 200 >gi|261821727|ref|YP_003259833.1| hypothetical protein Pecwa_2465 [Pectobacterium wasabiae WPP163] gi|261605740|gb|ACX88226.1| type IV / VI secretion system protein, DotU family [Pectobacterium wasabiae WPP163] Length = 413 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 57/137 (41%), Gaps = 7/137 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V ++++ + +F +S+ VV++++ E + + Sbjct: 264 LKPEIDAGLVAVRDEADQSVVTL---KGDGLFASASTDVRGRYDVVIKRVAEAMNNVRGK 320 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA- 323 + + G++D P R+ N+ LSL RA S +L + R++ G + + Sbjct: 321 VLVIGYSDNVPIRSARFASNYELSLARAQSVQTLLQQQLTQPSRVTAA-GRGENHPLVPN 379 Query: 324 -SDPMNSANRRIDILVE 339 + + NRR++I + Sbjct: 380 TNAENRARNRRVEITLL 396 >gi|269119353|ref|YP_003307530.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386] gi|268613231|gb|ACZ07599.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386] Length = 178 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 13/157 (8%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 K++++ +I++ L+ + E +I + + + FD S PE Sbjct: 25 KQMRNDTIRINAMEVELINEKTEPAEKKEVKEEKKVIRLGEDKLY--FDFDDSRVKPEYY 82 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L+ EV+ +S+ ++I G+TD+ + A N +LSL RA + LM+ G++E+ I Sbjct: 83 GELRAAAEVIKNSSMRVNITGYTDS---KGSAEYNEKLSLRRAEAVKAKLMEFGLNENYI 139 Query: 310 SKISGFAHHRLKIASD--------PMNSANRRIDILV 338 + + G + + NRRI++ + Sbjct: 140 AGVRGLGESNPIAPNTKSDGKDNPEGRAKNRRIELEL 176 >gi|228474110|ref|ZP_04058851.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624] gi|228274624|gb|EEK13465.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624] Length = 668 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 14/199 (7%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 DS++ + K+ + + + +N + + A K + + I Sbjct: 475 DSQQKEITRKTNEANGTFDFGKNPVDCDDTFVFVRAQKEDYAVAEEQINIRQNGEIHQEI 534 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-I 268 + T + FD S P+ V L KI EV+ + I Sbjct: 535 FLKSIKKKVTVGDDLAKFF--NIEIIYFDFDKSNIRPDAAVDLAKIVEVMKEHPTIKIAI 592 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--AS-- 324 + HTD+ N LS RA S + +++ G+ R++ G+ +L ++ Sbjct: 593 KSHTDSR---GSDAYNLALSDRRAKSTLEWMVQQGIDRSRLTA-KGYGETQLVNGCSNGV 648 Query: 325 ---DPMNSANRRIDILVED 340 + + NRR + ++ + Sbjct: 649 PCSEEEHQKNRRSEFIITE 667 >gi|90407045|ref|ZP_01215235.1| outer membrane protein [Psychromonas sp. CNPT3] gi|90311916|gb|EAS40011.1| outer membrane protein [Psychromonas sp. CNPT3] Length = 383 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 9/102 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ S PE V+ ++L I + GHTD+ + N LS RA Sbjct: 287 FNSSKIKTSPELTNVVV---QLLQTKEGDIEVIGHTDSL---GSKKYNQWLSEKRAQVVA 340 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 L+K GV RI + G +++ + NRR+ I Sbjct: 341 DYLVKEGVDPSRII-VKGEGESSFVSSNETAEGRAKNRRVKI 381 >gi|187251342|ref|YP_001875824.1| outer membrane protein [Elusimicrobium minutum Pei191] gi|186971502|gb|ACC98487.1| Outer membrane protein [Elusimicrobium minutum Pei191] Length = 217 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290 +N +F S+ + I + + +V +I + GHTD++ A N LS + Sbjct: 99 KNDILFATGSAELSSQAINDIAAMSKVFKKYPYNIIVVEGHTDST---GSASFNQTLSEN 155 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA + Y L+ + V I G+ ++D + NRR+ + ++ + Sbjct: 156 RARAVYNQLIANNVKTYSIG-YRGYGASNPIASNDTAAGRAQNRRVTLNIKADK 208 >gi|167035188|ref|YP_001670419.1| peptidoglycan-associated lipoprotein [Pseudomonas putida GB-1] gi|166861676|gb|ABZ00084.1| peptidoglycan-associated lipoprotein [Pseudomonas putida GB-1] Length = 166 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 67 FEYDSSDLKPEAMRALDVHAKDLKSNGNRVVLEGNTDER---GTREYNMALGERRAKAVQ 123 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 124 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 164 >gi|119477093|ref|ZP_01617329.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [marine gamma proteobacterium HTCC2143] gi|119449456|gb|EAW30694.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [marine gamma proteobacterium HTCC2143] Length = 363 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 8/194 (4%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + K + D + + + + A+ + D + D Sbjct: 170 GGEKKAAPMAIDGDADSDGVTDSNDQCPTTPAGAAVDARGCALDSDNDGVADYQDACLDT 229 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-R 269 + E +L + F SS + + E + S+ Sbjct: 230 PAGRQVDERGCKYVLKRTEEVSLNVNFASDSSAVEGNYTSEISNVAEFMKKFAGATSVIE 289 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328 GHTD + A N LS RA + VL+ G+S +R+S G+ R +D + Sbjct: 290 GHTDDT---GSAIYNETLSQKRANAVMNVLVNRFGISAERLSA-KGYGEARPIQDNDSVE 345 Query: 329 SA--NRRIDILVED 340 NRR+ +++ Sbjct: 346 GRRANRRVVAVIKA 359 >gi|297537693|ref|YP_003673462.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301] gi|297257040|gb|ADI28885.1| OmpA/MotB domain protein [Methylotenera sp. 301] Length = 224 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 7/111 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D + F + P +L L + ++I GHTD++ N LS Sbjct: 104 DIPSDISFAVGRADVQPNFRAILDTFANGLVTNPNSNVTIIGHTDST---GSDAVNNPLS 160 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L+RA S L V+ +RI I G +A+D + NRR++I Sbjct: 161 LNRAASVRDYLTSKRVASNRI-TIDGRGSREPLVANDTAANKAKNRRVEIF 210 >gi|86134861|ref|ZP_01053443.1| OmpA family protein [Polaribacter sp. MED152] gi|85821724|gb|EAQ42871.1| OmpA family protein [Polaribacter sp. MED152] Length = 234 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 64/156 (41%), Gaps = 17/156 (10%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 KR+ + AKKI + + G + + G++ D+ + FD + S ++ Sbjct: 81 KRMDEQAKKIETEVPGAKVERVDDGIVVT----------FDENSGVYFDTNKSNINTKSQ 130 Query: 250 VVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L ++ + L I + GHTD + A N LS RA S L+ G++ R Sbjct: 131 QTLDRLAKVFLEFPDTKILVVGHTDNT---GNADYNLTLSEKRAKSVTNYLISDGIASPR 187 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + + + K + + NRR+++ + + Sbjct: 188 FQTL-WYGEAQPKYDNSTAEGRAKNRRVNVAIVPNE 222 >gi|319796493|ref|YP_004158133.1| ompa/motb domain protein [Variovorax paradoxus EPS] gi|315598956|gb|ADU40022.1| OmpA/MotB domain protein [Variovorax paradoxus EPS] Length = 219 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 7/113 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD + P VL + L ++ + I GHTD++ N LS+D Sbjct: 107 PSDVSFDVGRANIKPNFAPVLDQFASGLRNNPNAEVRIIGHTDST---GSDAINNPLSVD 163 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 RA S L+ GV+ +I G H + D + NRR++I V +R Sbjct: 164 RAASTRDYLVARGVNAAAF-RIEGRGSHEPVADNNSDAGRAQNRRVEIYVGER 215 >gi|260642406|ref|ZP_05415772.2| lipoprotein PG3 [Bacteroides finegoldii DSM 17565] gi|260622249|gb|EEX45120.1| lipoprotein PG3 [Bacteroides finegoldii DSM 17565] Length = 260 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 59/156 (37%), Gaps = 12/156 (7%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 ++ + + V+ + + ++ + +F ++ P L K Sbjct: 97 KMDKAAAEAKQIEGAQVEQITDNNGLKAVKVTF---DSGILFTTGNASLSPAAKSALSKF 153 Query: 256 GEVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDR 308 + + +SI G+TD +RN + N LS +RA S L+ GVS ++ Sbjct: 154 ANNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSRQKNLNLSQERAQSVASYLLNCGVSSNQ 213 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 I + G ++D NRR+++ + + Sbjct: 214 IKGVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 249 >gi|197117628|ref|YP_002138055.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem] gi|197086988|gb|ACH38259.1| OmpA family outer membrane protein, OprF domain-containing protein [Geobacter bemidjiensis Bem] Length = 434 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + P+ L+ + + L + GHTD N +LS RA + Sbjct: 328 FDTNKADLKPQYRPELKALADFLNEFPNATGVIEGHTDNV---GPKALNMKLSQSRADTI 384 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 L+K G++ +RI + G+ + ++ + NRRI+ Sbjct: 385 RNSLIKEFGIAPERIKAV-GYGPTKPVASNKDKAGKAKNRRIE 426 >gi|49081460|gb|AAT50132.1| PA0973 [synthetic construct] Length = 169 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L S + + + GHTD N L RA + Sbjct: 69 FEYDSSDLKPEAMRALDVHAKDLKGSGQRVVLEGHTDER---GTREYNMALGERRAKAVQ 125 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + NRR+++ Sbjct: 126 RYLVLQGVSPAQLELVS-YGKERPVATGHDEQSWAQNRRVEL 166 >gi|262378528|ref|ZP_06071685.1| OmpA/MotB [Acinetobacter radioresistens SH164] gi|262299813|gb|EEY87725.1| OmpA/MotB [Acinetobacter radioresistens SH164] Length = 485 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ +L + +L V+ +++GHTDA N LS+ RA + Sbjct: 365 FASGSAQVPDVNKPILDQAAALLQRVPNVVVTVKGHTDAE---GSEAVNNNLSVQRAQAV 421 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L+ GVS ++ + G+ + + NRRI+ + + Sbjct: 422 VNYLVSRGVSPSKLQAL-GYGQDQPVTDNATSQGKFQNRRIEFEILN 467 >gi|225025598|ref|ZP_03714790.1| hypothetical protein EIKCOROL_02500 [Eikenella corrodens ATCC 23834] gi|224941636|gb|EEG22845.1| hypothetical protein EIKCOROL_02500 [Eikenella corrodens ATCC 23834] Length = 183 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 68/185 (36%), Gaps = 19/185 (10%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + ++ + N P ++ L +S+ S L + + T Sbjct: 1 MPQTASDASNASAPAADEQASAVASASSALSAQGNSLSAQGSNLSSQGSG--LSATETGF 58 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIA 281 I I++ +FD + PE LQK +++ VI I GHTD+ + Sbjct: 59 NIEINLSSD---VLFDFDKAELKPEADADLQKAADIIRQKGQGVILITGHTDS---KGSD 112 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRR 333 N RLSL RA + G+ ++ ++ G R + + NRR Sbjct: 113 AYNQRLSLARAQAVKNWFEAKGLQQN--YQLEGLGATRPIAPNTHPDGSDNPEGRAQNRR 170 Query: 334 IDILV 338 ++I+V Sbjct: 171 VEIIV 175 >gi|46579833|ref|YP_010641.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449248|gb|AAS95900.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough] Length = 357 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 49/150 (32%), Gaps = 13/150 (8%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L + K + + + D I++ F +S+ Sbjct: 215 ADLLNNEKALDKFVRDVFYDEQAPKAAAAPMEEVIVLR------NVQFALNSAKLDASAT 268 Query: 250 VVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + ++ + + GHT N +LS RA S L+K GV R Sbjct: 269 SILTEAARIIKANPGKKLLVAGHTCNL---GTDAYNLKLSDARAKSVKDFLVKQGVEASR 325 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDI 336 + GF + K + NRR+++ Sbjct: 326 LDTF-GFGESQPKYDNGTEQGRSMNRRVEL 354 >gi|34541639|ref|NP_906118.1| lipoprotein PG3 [Porphyromonas gingivalis W83] gi|5081699|gb|AAD39495.1|AF145799_1 immunogenic 23 kDa lipoprotein PG3 [Porphyromonas gingivalis] gi|34397957|gb|AAQ67017.1| lipoprotein PG3 [Porphyromonas gingivalis W83] Length = 223 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 10/146 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ L A + IL++ + +F +SS P + L K Sbjct: 70 KKMDKQKKELEAAVPDATIQTVNDGEAILVTF---DSGILFATNSSTLSPNSRTALTKFA 126 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + + + I I GHTD + + N LS RA S Y L GVS R+ G Sbjct: 127 ANMNKNPDTDIRIVGHTDNT---GSDKINDPLSERRAASVYSFLNSQGVSMSRM-AAEGR 182 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 H + + NRR+++ + Sbjct: 183 GSHEPVADNSTVAGRSANRRVEVYIL 208 >gi|254511628|ref|ZP_05123695.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11] gi|221535339|gb|EEE38327.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11] Length = 634 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 87/307 (28%), Gaps = 23/307 (7%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + + T+ I ++ + PE N + Sbjct: 307 ITLVAAQDTNPLLFDRIVGELENALPDVFVLHAVL------PEPEPDNPVGPVEFTATRS 360 Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 +++ + + + ++ + + + + D + L+ + Sbjct: 361 PEGLVQLRGRVGDETLRDMADSFARAAFGSEQVYTATRIASDLPADWPVRVLAGLDALSH 420 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD----------NIVKGVLFE 218 + + + + S G D + Sbjct: 421 LHNGALTVTSDNVSLRGVSHDPEARAQIAGMLSDKLGDAQDFTLAITYHEPPPPADAPPD 480 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277 I+ + Q + F+ S+ + ++ L +I ++L + I+GHTD+ Sbjct: 481 PEICEEQIAEVQQGSKIAFEPGSATVVADSRAALDQIADILRECGPIRLEIQGHTDSQ-- 538 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 N +LS RA S L V S + G+ +D + NRRI+ Sbjct: 539 -GREEMNQQLSQARAQSILNELRGRRVPTSSFSAV-GYGETLPIADNDTEDGREANRRIE 596 Query: 336 ILVEDRQ 342 L+ + Sbjct: 597 FLLIRPE 603 >gi|104782507|ref|YP_609005.1| OmpA family outer membrane protein [Pseudomonas entomophila L48] gi|95111494|emb|CAK16214.1| putative outer membrane protein, OmpA family [Pseudomonas entomophila L48] Length = 257 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 84/242 (34%), Gaps = 14/242 (5%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 T S L + E++ +QQ++ S + + Sbjct: 19 GCAATPESPRLVEAREAFSALQGKPESHRIAALETQQAQAALGKAEEASLVSRKSPEVEQ 78 Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 L N+ + A R + ++ + L N +K + + T Sbjct: 79 LAYLANRRIETAEETIRLRTAEAGMRGIEARRAEARLEVRTAQL---NALKALKGKETDR 135 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIA 281 G +++ D +FD + + +Q++ + L + E + G TD++ Sbjct: 136 GTVVTFGD----VLFDTGRAELRSHSHDDIQRLAQFLRDNPERKVRVEGFTDST---GGD 188 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 N RLS +RA + L + GV RI G+ ++ +S NRR++++V Sbjct: 189 ALNLRLSENRAAAVAHALRRQGVDPARIVSA-GYGKASPVASNADAHSRQLNRRVEVIVS 247 Query: 340 DR 341 Sbjct: 248 RD 249 >gi|308126360|ref|ZP_07663727.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ4037] gi|308109365|gb|EFO46905.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ4037] Length = 161 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 2/106 (1%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAY 293 MF + + P +L + + T + I GHTDA PF+ + NW LS RA Sbjct: 1 MFSRGGAELTPFFEDLLLALAPLFEQVTNPLIISGHTDAIPFKKRFGRQSNWALSASRAD 60 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 A + L++ G+ +DR+ +++G + L +P +S NRRI++ + Sbjct: 61 VARKTLVEGGMPDDRVMQVTGMSDRALLNPDEPDSSENRRIELFIL 106 >gi|183222805|ref|YP_001840801.1| hypothetical protein LEPBI_I3466 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167781227|gb|ABZ99525.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 461 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F+++SS+ E+ + L I + L +++ + I GHTD DN LS +R Sbjct: 354 DSVYFERASSVLKSESSIPLDSIVDYLHENSDQKMKIIGHTD---LTGTYDDNMVLSKER 410 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 A S Q L+ GV +R+ G + + S NRR + ++ + Sbjct: 411 AESVKQYLVSKGVDPNRLVT-EGKGPTQPMVQGTDEASSKKNRRTEFVLLNP 461 >gi|189912837|ref|YP_001964392.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777513|gb|ABZ95814.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] Length = 423 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 ++ F+++SS+ E+ + L I + L +++ + I GHTD DN LS +R Sbjct: 316 DSVYFERASSVLKSESSIPLDSIVDYLHENSDQKMKIIGHTD---LTGTYDDNMVLSKER 372 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 A S Q L+ GV +R+ G + + S NRR + ++ + Sbjct: 373 AESVKQYLVSKGVDPNRLVT-EGKGPTQPMVQGTDEASSKKNRRTEFVLLNP 423 >gi|54302322|ref|YP_132315.1| outer membrane protein OmpA [Photobacterium profundum SS9] gi|46915744|emb|CAG22515.1| hypothetical outer membrane protein OmpA [Photobacterium profundum SS9] Length = 324 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S + I LQ I + L + E + + GHTD+ N LS +RA Sbjct: 215 FAFDSDTLSQQDIDQLQPIAQRLVNFPETELFVIGHTDSR---GAEAYNQNLSEERAAVV 271 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L G+ + RI G +D NRR+++ Sbjct: 272 AGYLATHFGIEQSRIQA-QGRGELEPVATNDTEDGRGQNRRVEVF 315 >gi|83749427|ref|ZP_00946420.1| Chemotaxis motB protein [Ralstonia solanacearum UW551] gi|207738949|ref|YP_002257342.1| outer membrane protein [Ralstonia solanacearum IPO1609] gi|83723907|gb|EAP71092.1| Chemotaxis motB protein [Ralstonia solanacearum UW551] gi|206592320|emb|CAQ59226.1| outer membrane protein [Ralstonia solanacearum IPO1609] Length = 215 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 20/173 (11%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 LS +K+++ K + L+G +A R ++ I Sbjct: 39 AVQLELSSRLDQEVKQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGIS 88 Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNW 285 + +F +S PE +L+ + L E++ + G D DNW Sbjct: 89 GSVLFALNSDQLQPEGRELLKSLAGPLSAYLRSRDEILMVSGFADDQQVHAGNRRFADNW 148 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 LS RA + + L+ +G+ + + F + ++ D + NRR++I Sbjct: 149 ELSAKRALTVTRALIDAGIPGASVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 200 >gi|15596170|ref|NP_249664.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa PAO1] gi|107100429|ref|ZP_01364347.1| hypothetical protein PaerPA_01001454 [Pseudomonas aeruginosa PACS2] gi|116048898|ref|YP_792301.1| peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|218893056|ref|YP_002441925.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa LESB58] gi|254239321|ref|ZP_04932644.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa C3719] gi|254245256|ref|ZP_04938578.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa 2192] gi|296390668|ref|ZP_06880143.1| peptidoglycan-associated lipoprotein [Pseudomonas aeruginosa PAb1] gi|81622520|sp|Q9I4Z4|PAL_PSEAE RecName: Full=Peptidoglycan-associated lipoprotein; Flags: Precursor gi|9946880|gb|AAG04362.1|AE004530_15 Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa PAO1] gi|115584119|gb|ABJ10134.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|126171252|gb|EAZ56763.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa C3719] gi|126198634|gb|EAZ62697.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa 2192] gi|218773284|emb|CAW29096.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa LESB58] Length = 168 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L S + + + GHTD N L RA + Sbjct: 69 FEYDSSDLKPEAMRALDVHAKDLKGSGQRVVLEGHTDER---GTREYNMALGERRAKAVQ 125 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + NRR+++ Sbjct: 126 RYLVLQGVSPAQLELVS-YGKERPVATGHDEQSWAQNRRVEL 166 >gi|260590691|ref|ZP_05856149.1| lipoprotein PG3 [Prevotella veroralis F0319] gi|260537352|gb|EEX19969.1| lipoprotein PG3 [Prevotella veroralis F0319] Length = 256 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 8/148 (5%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K++ + + + V V + ++ + +F + S L K+ Sbjct: 105 MDKVAREAAQQLPNASVDKVTDANGLECVKVTF---DSGILFPLNGSDLNAAAKNDLTKL 161 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++ ++ I+G+TDA + N LS RA S L GV+ +I + G Sbjct: 162 AGLMKRNSNCDVAIQGYTDA---SGNDKINIPLSQRRASSVSSYLQNQGVTSRQIRSVEG 218 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 F + ++ NRR+++ + Q Sbjct: 219 FGSQNPI-ENKTVSQKNRRVEVYLYASQ 245 >gi|254459056|ref|ZP_05072479.1| OmpA domain protein [Campylobacterales bacterium GD 1] gi|207084327|gb|EDZ61616.1| OmpA domain protein [Campylobacterales bacterium GD 1] Length = 254 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S E + LQ L + I G+TD+ A N LS +RA + Sbjct: 152 FAPSKYNVSEELVNDLQNFALFLKENPGYQILIYGYTDSI---GSAAANKTLSQNRANAV 208 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340 + L + G+ R++ I G + + NRRI++ + Sbjct: 209 KEALSRYGIKTTRMTAI-GKGEANPIADNTTKTGRAENRRIEVELLQ 254 >gi|32266001|ref|NP_860033.1| flagellar motor protein MotB [Helicobacter hepaticus ATCC 51449] gi|32262050|gb|AAP77099.1| flagellar motor component MotB [Helicobacter hepaticus ATCC 51449] Length = 251 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 8/162 (4%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 ++ + IS + S A+ + + + FD S+ Sbjct: 67 DQDDVNDSETENESGAISESSSVTSAEIEQMAEEGGILEQMEMGMSLRLPSNLFFDSGSA 126 Query: 243 IPL-PETIVVLQKIGEVLAHSTEV--ISIRGHTDA--SPFRNIARDNWRLSLDRAYSAYQ 297 + + LQ++ ++ + I +RG+TD P + +DN+ LS R+ S + Sbjct: 127 EINNSDVFLYLQRMSAIIKKLPDYVKIDVRGYTDNAPLPVGSRYKDNYELSSARSLSVMK 186 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L+K+G+S +RI SG+ H+ +D + N R++I Sbjct: 187 NLIKNGISPERI-SFSGYGEHQAIAPNDSALNRAKNNRVEIF 227 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ +W I++T + + ++ F +T Sbjct: 3 KKKKCPECPAG-EKWAVPYADFLSLLLALFIALWAISSTSNADSELLKTEFVKIFDFTLT 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 + + + +S +T ++ +Q + Sbjct: 62 SPLNSDQDDVNDSETENESGAISESSSVTSAEIEQMAEEGGILEQMEMGM 111 >gi|292490116|ref|YP_003533011.1| putative outer membrane lipoprotein yiaD [Erwinia amylovora CFBP1430] gi|292901121|ref|YP_003540490.1| outer membrane protein [Erwinia amylovora ATCC 49946] gi|291200969|emb|CBJ48108.1| putative outer membrane protein [Erwinia amylovora ATCC 49946] gi|291555558|emb|CBA24133.1| putative outer membrane lipoprotein yiaD precursor [Erwinia amylovora CFBP1430] Length = 221 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SSS P L + Sbjct: 81 YMDVQEAKLRDKMKGTGVSVTRSGDNIVLNM---PNNVTFDSSSSTLKPAGANTLTGVAM 137 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD+ + N LS RA L+ GV+ +R+ + +G Sbjct: 138 VLKEYPKTAVNVVGYTDS---SGSRQLNMNLSQQRADGVGSALIAQGVAANRV-RTNGMG 193 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 194 PDNPVASNSSAEGKAQNRRVEITL 217 >gi|330873229|gb|EGH07378.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 229 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A GV + I + + F SS L + L Sbjct: 87 DKQEAALRASMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLANSL 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L GV + + + G Sbjct: 144 KQFNQNNIEIIGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199 Query: 319 RLKIAS-DP-MNSANRRIDILVEDRQG 343 + ++ D + NRR+++ ++ G Sbjct: 200 QPIASNADTNGRAQNRRVEVNLKPIPG 226 >gi|313683568|ref|YP_004061306.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994] gi|313156428|gb|ADR35106.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994] Length = 412 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 76/286 (26%), Gaps = 24/286 (8%) Query: 59 DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118 + ++Q P + + + ++L LK G + Sbjct: 144 VRKYQGLDQDLKPLKNPQWQRKGNTYTLTARDVKGACIMMEL----------EKLKPGQS 193 Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178 + + + ++ K EK + T + ++ PP+ Sbjct: 194 ASSIAMADPMQPVIDVKPVKPTKPRKEEPAVPKEKETPVPDVTKTVMPEPEVKSQTTPPI 253 Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + + + + V N +F+ Sbjct: 254 ANVEPKIEPAAPVVAAKPAVEKPVVVVAKPATEKPVVEAAAPAPYFR-------NFQIFE 306 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF---RNIARDNWRLSLDRAYS 294 L++ ++ +I G+TD P + + N LS RA Sbjct: 307 SRVVALSEVGKERLREWAQLFKAGGYKSVTINGYTDNIPPQRLKALYATNAILSEARAQM 366 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ GV I ++G ++ NRRI+ ++ Sbjct: 367 VADYLVSIGVDSSAIK-VNGRGDVDPVAPNETEEGRSKNRRIEFIL 411 >gi|255319448|ref|ZP_05360662.1| outer membrane protein [Acinetobacter radioresistens SK82] gi|255303388|gb|EET82591.1| outer membrane protein [Acinetobacter radioresistens SK82] Length = 486 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ +L + +L V+ +++GHTDA N LS+ RA + Sbjct: 366 FASGSAQVPDVNKPILDQAAALLQRVPNVVVTVKGHTDAE---GSEAVNNNLSVQRAQAV 422 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L+ GVS ++ + G+ + + NRRI+ + + Sbjct: 423 VNYLVSRGVSPSKLQAL-GYGQDQPVTDNATSQGKFQNRRIEFEILN 468 >gi|312887218|ref|ZP_07746822.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] gi|311300530|gb|EFQ77595.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] Length = 177 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 54/157 (34%), Gaps = 8/157 (5%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGILISIIDQRNTPMFDKSSS 242 A K KK + + + + + V ++ + F+ S+ Sbjct: 22 PACKSKKEIAKPQPPLVEVVKKVPEEKKPEPQVEAPKEVAPVVEKPDYNFSNLQFEFDSA 81 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 I + +L K+ + V + G++ A N LS +RA S L+ Sbjct: 82 ILKTSSYPMLDKVARAMKLDASVKFVLNGYSSAE---GTPEHNLLLSEERANSVKTYLLN 138 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 +GV +++ G+ + NRR++I Sbjct: 139 AGVDASQLTA-KGYGDSNPITPNTTEEGRVLNRRVEI 174 >gi|262401486|ref|ZP_06078054.1| outer membrane protein A precursor [Vibrio sp. RC586] gi|262352307|gb|EEZ01435.1| outer membrane protein A precursor [Vibrio sp. RC586] Length = 109 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 7/106 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 MF S P E I L +I VL + + GHTD++ A N +S RA + Sbjct: 1 MFGFDSVEPSQEFIDQLTEISSVLISYPQAQAKVVGHTDST---GSALYNQNISEHRAQA 57 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L++ GV+ ++ + G + ++ NRR++I + Sbjct: 58 VVNKLIELGVTPTQL-EWRGEGEFQPVADNNTAEGRAANRRVEITI 102 >gi|322418762|ref|YP_004197985.1| OmpA/MotB domain-containing protein [Geobacter sp. M18] gi|320125149|gb|ADW12709.1| OmpA/MotB domain protein [Geobacter sp. M18] Length = 465 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 84/264 (31%), Gaps = 16/264 (6%) Query: 88 NPPERSSQNKIDLSIDEHITKNS----VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 P + + ++ T + L+ + + ++ + ++ Sbjct: 201 GEPAPAKEPPLEPVPAAEPTPGHYKYCITLQGEFDIDQAIIRTELHDQIAQVGNFMKKYP 260 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 + + + +++ S + E + + I + + + I+ Sbjct: 261 TTTAVIEGHTDNVGSYNHNMDLSQRRAEAVVSHLVEQYGIDRSRLSAKGYGFTRPIADNA 320 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVL 259 + + + +R FD + P+ + K+ + + Sbjct: 321 TEEGRQKNRRIEAVIDCAFDVQQVTPAERLCMALVLDFDSGKADIKPQYRDEIAKVADYM 380 Query: 260 AHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317 T ++ GHTD + N +LS RA + L+ + G+ R+S G+ Sbjct: 381 KRYTTTTAVIEGHTDNT---GSPSQNMKLSQQRAQNVVDYLVNNFGIERSRLSA-KGYGA 436 Query: 318 HRLKIASDP--MNSANRRIDILVE 339 R +D NRRI+ +++ Sbjct: 437 TRRVAYNDTPEGRQKNRRINAVID 460 >gi|228474126|ref|ZP_04058867.1| inner membrane lipoprotein YiaD [Capnocytophaga gingivalis ATCC 33624] gi|228274640|gb|EEK13481.1| inner membrane lipoprotein YiaD [Capnocytophaga gingivalis ATCC 33624] Length = 231 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 8/142 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + G + GI+++ D+++ F+ + + E +L K+ VL Sbjct: 83 QAKKIEEEIPGAEVKRVDDGIVVTF-DEKSGVTFEFNKADLTSEAKTLLTKMAGVLKEYP 141 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + + GHTD+ + N LS RA + SG+ R + F + Sbjct: 142 DTNVIVAGHTDS---KGKPAYNMGLSERRAKAVTNFFTASGLKASRFTT-KWFGATQPAY 197 Query: 323 ASDPM--NSANRRIDILVEDRQ 342 + + NRR++I + + Sbjct: 198 DNSTEEGRAKNRRVNIAIVPNE 219 >gi|206564258|ref|YP_002235021.1| putative outer membrane protein A precursor [Burkholderia cenocepacia J2315] gi|198040298|emb|CAR56283.1| putative outer membrane protein A precursor [Burkholderia cenocepacia J2315] Length = 220 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 7/203 (3%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + S + + D ++ + ++ + L K Sbjct: 21 ASGPTFSASELQPRDGVRTFQVDCHGLLSGPQTCMKAARKICGDEPVRAVDSARALRDKS 80 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 ++ ++ +F + P L ++ Sbjct: 81 DPATLVFQCGAAPAEAASAAEPAAAVVERVNLSGDALFATDHATLAPTARESLDRLLSER 140 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 A T +++ G TD+ N LS RA S L G+ D + +SG Sbjct: 141 ADRTYSQVTVTGFTDSV---GSDDYNLALSKRRAESVAAYLKAHGLKTDSM-TVSGRGKA 196 Query: 319 RLKIASDPMNSA--NRRIDILVE 339 ++ NRR++I ++ Sbjct: 197 DPVASNATPEGRASNRRVEIRLQ 219 >gi|26987958|ref|NP_743383.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas putida KT2440] gi|148546495|ref|YP_001266597.1| peptidoglycan-associated lipoprotein [Pseudomonas putida F1] gi|60392879|sp|P0A138|PAL_PSEPK RecName: Full=Peptidoglycan-associated lipoprotein; Flags: Precursor gi|60392880|sp|P0A139|PAL_PSEPU RecName: Full=Peptidoglycan-associated lipoprotein; Flags: Precursor gi|24982671|gb|AAN66847.1|AE016313_6 peptidoglycan-associated lipoprotein OprL [Pseudomonas putida KT2440] gi|663068|emb|CAA52294.1| OprL protein [Pseudomonas putida] gi|148510553|gb|ABQ77413.1| Peptidoglycan-associated lipoprotein [Pseudomonas putida F1] gi|313497575|gb|ADR58941.1| OprL [Pseudomonas putida BIRD-1] Length = 166 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 67 FEYDSSDLKPEAMRALDVHAKDLKANGNRVVLEGNTDER---GTREYNMALGERRAKAVQ 123 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 124 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 164 >gi|332292401|ref|YP_004431010.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332170487|gb|AEE19742.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 652 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 11/121 (9%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + + FD + P+ + L KI +L+ + I I HTDA N Sbjct: 534 LKIKVGIIFFDLNKDYIRPDAAMELNKIVTLLSQQPSIEIRIESHTDAR---ADDNYNME 590 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVE 339 LS RA S L++ G++++RI GF +L + + NRR + ++E Sbjct: 591 LSQRRAISTKNYLIRQGIAKERILSAQGFGETQLLNDCSNGVQCDEVQHQINRRSEFIIE 650 Query: 340 D 340 Sbjct: 651 K 651 >gi|325953789|ref|YP_004237449.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] gi|323436407|gb|ADX66871.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] Length = 337 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 11/141 (7%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVL 259 ++ L + + + I + D+ + FD + + + +I + L Sbjct: 199 INILQKEGFKQTISML-KADQIQKDLNDKGKAVLHINFDTDKATLKADGKEAVAEITKAL 257 Query: 260 A-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ISI G+TD + + N LS RA + + L+KSG+ +R+S GF + Sbjct: 258 NTDKMLKISINGYTDNT---GDEKHNLDLSKQRAETVKKELIKSGIDVNRLSS-EGFGQN 313 Query: 319 RLKIASDPMNSA--NRRIDIL 337 ++ NRR++++ Sbjct: 314 NPIADNNTEEGKSQNRRVELI 334 >gi|254506121|ref|ZP_05118265.1| outer membrane protein [Vibrio parahaemolyticus 16] gi|219550939|gb|EED27920.1| outer membrane protein [Vibrio parahaemolyticus 16] Length = 211 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 7/155 (4%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + + + L + L + + + F+ S Sbjct: 59 QQIVTQGEVTPEMAWLKEELKAIGLSLNCTEYLLTNSEVRLSND-PEVIARVYFNFDQST 117 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 ++ VL ++ ++ ++ + + GHTD A N+ L L R+ S L+ G Sbjct: 118 LTQQSEYVLTRVIRMVESNSSNLELAGHTDNV---GDAGYNFSLGLKRSKSVEDYLIDQG 174 Query: 304 VSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 V R++ S + + + + D NRR++I Sbjct: 175 VDPKRVTTTS-YGETKPFVDNMSDENRKLNRRVEI 208 >gi|254452952|ref|ZP_05066389.1| OmpA/MotB [Octadecabacter antarcticus 238] gi|198267358|gb|EDY91628.1| OmpA/MotB [Octadecabacter antarcticus 238] Length = 668 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 89/265 (33%), Gaps = 17/265 (6%) Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 ++S D + + + QR + + + E + + Sbjct: 406 QTSVAAADSDRQAALLALANNALTQEQALSADNQRQVALLNEQVAALRGEMGRLQALLNL 465 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 E D+ + +E L E+ + L+ +A + + L +D + Sbjct: 466 ENEADVTANVQIETLTQNLNTAMARALLAERRARVLEDAELERMAAE-AVELERYRSDFL 524 Query: 212 VKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS------- 262 G+ I + +F++ ++ + + K+ +L Sbjct: 525 GLLRNVLEDVDGVRIEGDRFVFSSEVLFEQGAARLSADGQREIAKVAAILRDVAGDIPES 584 Query: 263 -TEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 VI + GHTD P +NW LS RA S ++ + DR+ +GF + Sbjct: 585 IDWVIRVDGHTDNVPLSGAGEFANNWELSQARALSVVLYMVNFLAIPPDRL-AANGFGQY 643 Query: 319 RLKIASDP--MNSANRRIDILVEDR 341 + D + NRRI++ + +R Sbjct: 644 QPINLEDTTEARAQNRRIELKLTER 668 >gi|110640101|ref|YP_680311.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110282782|gb|ABG60968.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 670 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F +S+ + + L ++ EVL + I + GHTD A N LS R Sbjct: 565 KNVFFHQSTPNLIETSYPELDRMVEVLKTNPTVRIELDGHTDNQ---GDAALNLALSEKR 621 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + L+ G+ RI+ F + ++ + NRR++I++ Sbjct: 622 VETVKAYLVSKGIDNKRITT-RAFGGTKPIAPNNTEENRKKNRRVEIIIL 670 >gi|153952340|ref|YP_001398779.1| fibronectin-binding protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939786|gb|ABS44527.1| fibronectin-binding protein [Campylobacter jejuni subsp. doylei 269.97] Length = 319 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + +++I +VL + +I GHTD N +LS RA S Sbjct: 216 FDFDKTTINLTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L K GV + RI + G+ + +++ NRR+D Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNPRSSNNTKEGRADNRRVD 313 >gi|329943316|ref|ZP_08292090.1| ompA family protein [Chlamydophila psittaci Cal10] gi|332287892|ref|YP_004422793.1| putative peptidoglycan-associated protein [Chlamydophila psittaci 6BC] gi|313848464|emb|CBY17468.1| putative peptidoglycan-associated protein (periplasmic) [Chlamydophila psittaci RD1] gi|325507092|gb|ADZ18730.1| putative peptidoglycan-associated protein [Chlamydophila psittaci 6BC] gi|328814863|gb|EGF84853.1| ompA family protein [Chlamydophila psittaci Cal10] gi|328915156|gb|AEB55989.1| outer membrane protein, OmpA family [Chlamydophila psittaci 6BC] Length = 191 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S E + + ++ + I GHTD A N L RA + Sbjct: 87 FATDSYTIKGEENLAILSSLVRQMQKSPKMTLYIEGHTDER---GAASYNLALGARRANA 143 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341 Q L+K G+S DR+ +S + + ++ NRR + + R Sbjct: 144 VKQHLIKQGISADRLFTVS-YGKEQPINLGHNELAWQQNRRTEFKIHAR 191 >gi|192358872|ref|YP_001981881.1| putative agglutination protein [Cellvibrio japonicus Ueda107] gi|190685037|gb|ACE82715.1| probable agglutination protein [Cellvibrio japonicus Ueda107] Length = 599 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 8/121 (6%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIA 281 ++ + + +FD SS+ P L + + ++ +V I + GHTD + Sbjct: 481 LITDVNNLSGDALFDVGSSVLKPGATQKLDALIAQIKNTPKVVGIRVEGHTDNT---GTD 537 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 N LS RA + +G+ E+ + GF R ++ +ANRR++I + Sbjct: 538 ALNIPLSKARAQRVRDYAVLNGL-ENIPVSVDGFGASRPVADNNTEAGRAANRRVEISIT 596 Query: 340 D 340 Sbjct: 597 R 597 >gi|225012476|ref|ZP_03702912.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A] gi|225003453|gb|EEG41427.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A] Length = 322 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 7/114 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 I +N +F SSS+ L+K+ +L I I GHT A N + Sbjct: 211 IKSNQNKILFKASSSVLDKGGRATLEKVKMLLNTYQNTAIIIEGHTSTD---GSASYNQK 267 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 LS RA + L+ + RIS I G+ ++ + + +RR I + Sbjct: 268 LSEQRASAIKDYLISQTIDASRISTI-GYGENQPIGDNKTVKGRAESRRAKIKI 320 >gi|110636642|ref|YP_676849.1| outer membrane porin F [Cytophaga hutchinsonii ATCC 33406] gi|110279323|gb|ABG57509.1| outer membrane protein, porin F precursor [Cytophaga hutchinsonii ATCC 33406] Length = 669 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 N FD + E+ L ++ +L ++ + I G+TD+ N +LS R Sbjct: 561 NNVFFDFNKYELKSESYPELDRLVTLLKNNNAMKIEISGYTDSI---GTKSYNDKLSGRR 617 Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 A + L+ KS + + RI + F ++ NRR++ + ++ Sbjct: 618 AQAVATYLITKSAIDKSRI-TVKAFGEENPVTSNKTAKGRELNRRVEFKITNK 669 >gi|308126352|ref|ZP_07663724.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ4037] gi|308109323|gb|EFO46863.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ4037] Length = 182 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 53/155 (34%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ K+ A + G+WK+ +ADFM LMA FLV+W++ D + +KAI + + Sbjct: 3 KQEHVVFKRAKAHGHDEPHGGAWKVAFADFMIALMALFLVLWVMQVVDKEERKAIVAHLH 62 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + Q+ + + G + + + Sbjct: 63 SSSVFDKSYGNPFDTSQSISPIDLAQDSSVPSKHNSNHVVSSYFQGDGDGPEINSLVPGT 122 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 +TR ++ + + D + Sbjct: 123 FDTQEQLAALAKVIEEMTRADQRARKRQRYCDTAR 157 >gi|270264140|ref|ZP_06192407.1| hypothetical protein SOD_g00710 [Serratia odorifera 4Rx13] gi|270041789|gb|EFA14886.1| hypothetical protein SOD_g00710 [Serratia odorifera 4Rx13] Length = 219 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SS+ P L + Sbjct: 79 YMDVQEAKLRDKMKGTGVSVTRQGDNIVLNM---PNNVTFDSSSATLKPAGANTLTGVAM 135 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD+ N LS RA L+ GV+ +RI + SG Sbjct: 136 VLKEYPKTAVNVIGYTDS---SGSRALNMTLSQQRADGVGSALITQGVAANRI-RTSGAG 191 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 192 PDNPIASNSTAEGKAQNRRVEITL 215 >gi|284035576|ref|YP_003385506.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283814869|gb|ADB36707.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 306 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 67/184 (36%), Gaps = 7/184 (3%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + + + + + P + + K + + +++ + + V++ Sbjct: 126 TATPKPTSSATASAAKPTPASPPPVVAKPVSQPPAVKTVAANSERVVPPKTLDAKVVYTP 185 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278 + Q F +S + LP+ L+++ + + I + GHTD Sbjct: 186 PLVVAPVGKTTQLQALQFVQSKTELLPDAQPALEQLLQFMQSQPTAEIELSGHTDNQ--- 242 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336 N LS R L+K+G+ RI+ G+ R +++ NRR+++ Sbjct: 243 GDFDQNLLLSKQRVEVIKAYLVKNGIPASRITT-RGYGPTRPIASNNSETTRQQNRRVEM 301 Query: 337 LVED 340 +V Sbjct: 302 IVLK 305 >gi|157736296|ref|YP_001488979.1| hypothetical protein Abu_0025 [Arcobacter butzleri RM4018] gi|157698150|gb|ABV66310.1| hypothetical protein, OmpA domain [Arcobacter butzleri RM4018] Length = 316 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%) Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR 278 +LI+ I + F++ SSIP ++ +++I ++L + + GHTD+ Sbjct: 197 PEIQLLINNILKDRKISFERKSSIPTEQSQNTIKEIAKILNENPNFKVEVAGHTDSR--- 253 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 A N ++S DRA S +L+ SGV+E RI I G+ D + NRR++ Sbjct: 254 GEAALNKQISQDRANSVKNILVNSGVNETRIKAI-GYGEEFPIAKDDENGLSEINRRVEF 312 Query: 337 LV 338 ++ Sbjct: 313 II 314 >gi|329296508|ref|ZP_08253844.1| outer membrane protein A [Plautia stali symbiont] Length = 356 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L+ + + G TD + N +LS Sbjct: 228 KSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRI---GSDQYNQKLS 284 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN---------RRIDIL 337 RA S L+ G+ ++IS G + D + N RR++I Sbjct: 285 EKRAQSVVDYLVSKGIPANKISA-RGMGESNPVTGNTCDSVKGRNALIDCLAPDRRVEID 343 Query: 338 VED 340 V+ Sbjct: 344 VKG 346 >gi|71064914|ref|YP_263641.1| outer membrane protein [Psychrobacter arcticus 273-4] gi|71037899|gb|AAZ18207.1| probable outer membrane protein [Psychrobacter arcticus 273-4] Length = 394 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 10/140 (7%) Query: 210 NIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 V+ + + + I D+ + FD S + + K+ E + Sbjct: 245 GTPMNVVVDARGCPVPVDITDELKMELRVFFDNDKSAIKTQYKPEIAKVAEKMREYPNST 304 Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324 + GH + AR N RLS RA + +L G++ +R+S + G+ + + + Sbjct: 305 ARVEGHASKTGP--SARYNQRLSEARAVAVKSMLTNEFGIAPNRLSTV-GYGYDQPIADN 361 Query: 325 DPMNSA--NRRIDILVEDRQ 342 + NRR+ ++ + Sbjct: 362 NTEEGRAMNRRVYAIITGDK 381 >gi|78777214|ref|YP_393529.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251] gi|78497754|gb|ABB44294.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251] Length = 240 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 75/203 (36%), Gaps = 11/203 (5%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + K S S G ++ ++K P+ + + + L + Sbjct: 18 DAKKVSEAIGSLSGAMSVLEGGIKTEVSKRRIQESTPIESTDETSEQVNRISAALKEMNE 77 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + V E + G +I + + +F S++ E ++ K ++ Sbjct: 78 IQEAQASTQGSAAVVSLEEAQDGFVIEL---PASLLFKPGSAVIQNEDSLLFLKRVALII 134 Query: 261 ---HSTEVISIRGHTDAS--PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + +S+ GHTD + +DNW LS RA S Q L+ GV RIS G+ Sbjct: 135 GELPNETTLSVCGHTDDQGPSVKGPYKDNWELSSARAISVLQELLLDGVDPKRISAA-GY 193 Query: 316 AHHRLKIASDPMNSA--NRRIDI 336 A K + + NRR+++ Sbjct: 194 AEFSPKATNATESGREQNRRVEL 216 >gi|33603081|ref|NP_890641.1| putative outer membrane protein [Bordetella bronchiseptica RB50] gi|33568712|emb|CAE34470.1| putative outer membrane protein [Bordetella bronchiseptica RB50] Length = 215 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 10/126 (7%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + E + ++I + FD S P + VL + L E + GHTD+ Sbjct: 92 VVEMPDGSLKVNI---PSNVSFDTDKSQLKPALLPVLDSVARALNQHPELRTKVVGHTDS 148 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 + A N +LS++RA + L K GV++ R+ + G + + NR Sbjct: 149 T---GSAAHNQQLSVNRARAVTSYLGKQGVAQGRM-TVEGRGANDPVGDNATAEGRAANR 204 Query: 333 RIDILV 338 R+++ + Sbjct: 205 RVEVYL 210 >gi|160896293|ref|YP_001561875.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1] gi|160361877|gb|ABX33490.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1] Length = 244 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D + FD + S +L + E L ++ + I GHTD++ N LS Sbjct: 103 DIPSDISFDTNRSDIKGNFAPILDRFAEGLRNNPNAEVRIIGHTDST---GSDAINNPLS 159 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 LDRA S L GVS RI G H+ ++D + NRR++I V Sbjct: 160 LDRANSTRNYLTMRGVSGARI-ATEGRGSHQPVASNDSASGRAMNRRVEIFV 210 >gi|119773836|ref|YP_926576.1| Outer membrane protein-related peptidoglycan-associated (lipo)protein [Shewanella amazonensis SB2B] gi|119766336|gb|ABL98906.1| Outer membrane protein-related peptidoglycan-associated (lipo)protein [Shewanella amazonensis SB2B] Length = 481 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + +FD S LPE+ VL+ + L + GHTD + N LSL R Sbjct: 371 DGLLFDFDSDRMLPESQPVLEVLATYLKQHPAKGFYVVGHTDD---KGERAYNQSLSLRR 427 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 A + Q L + + +++ G + + ++ + NRR+++++ Sbjct: 428 ADAVIQSLTQQYHIPASQLTA-HGNGEYSPVASNENESGQALNRRVELVLRSD 479 >gi|331007308|ref|ZP_08330507.1| Flagellar motor rotation protein MotB [gamma proteobacterium IMCC1989] gi|330418870|gb|EGG93337.1| Flagellar motor rotation protein MotB [gamma proteobacterium IMCC1989] Length = 434 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 99/287 (34%), Gaps = 27/287 (9%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 KK + I + +N ++ ++K +N ++ K+ + Sbjct: 148 KKQLANTEQEKLAAQAGLKAEIDEIKNQLVQTEKDKNQSQEALSTIRNELEEKLVIKETE 207 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + Q + N F +Q+ E K L + + + + + + + E L L+K+ Sbjct: 208 YEKQIAQLNEFSSLINQKYEATKAQLDEELVRIAEFSATIETLEERLQREKTALSELTKQ 267 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 L K L ++ LI + D +F S Sbjct: 268 LALLDKTNAELSSEKSRLVQQFKDGTT----------------LIRLEDT---ILFSSGS 308 Query: 242 SIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAY 296 + L + + LA ISI GHTD P + NW LS RA A Sbjct: 309 ASLNARGQKTLSLVADTLAEFPNHLISIEGHTDHRPIVSTLAEKYPTNWELSAARASFAI 368 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 + LM+ G+ + + GFA+ R S NRRI+IL+ Sbjct: 369 RHLMEKGLPAKQFQAV-GFANTRPIAMDVDYASQKKNRRIEILLHPP 414 >gi|119357899|ref|YP_912543.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119355248|gb|ABL66119.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266] Length = 417 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 81/291 (27%), Gaps = 25/291 (8%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 KK G + S+ F + P R S LS+ + N Sbjct: 141 KKVDADNLGSLGLMSLLNSQKSFVQSAAPSRLSGVLGLLSLSQLGGMPPSSPTGIPGNIP 200 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + L L+ + +S + +TD + S Sbjct: 201 SFLKGLWPFFLILAALFLLINTCSSPSGQETPPATEAVATDTVTAPETAPAPLPADTSAV 260 Query: 182 KILAMKRKKR--------LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 A+ + L I L + D L+ Sbjct: 261 TSDALGAFEEYALPNGVKLNIPELGIERKLIAFIQDATKPADKETWFSFDRLV------- 313 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD S + + L IGE+L + I G+TD + N +LS RA Sbjct: 314 ---FDTGKSTLMATSQEQLNNIGEILKAYPAVELKIGGYTDNV---GDPQANKKLSQARA 367 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + L+K G+ R+ G+ + NRR+D V + Sbjct: 368 ETVMAELVKLGIDNIRL-AAEGYGIEHPVADNATEEGRQQNRRVDCRVTKK 417 >gi|315635427|ref|ZP_07890693.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315480185|gb|EFU70852.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 316 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%) Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR 278 +LI+ I + F++ SSIP ++ +++I ++L + + GHTD+ Sbjct: 197 PEIQLLINNILKDKKISFERKSSIPTEQSQNTIKEIAKILNENPNFKVEVAGHTDSR--- 253 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 A N ++S DRA S +L+ SGV+E RI I G+ D + NRR++ Sbjct: 254 GEAALNKQISQDRANSVKNILVNSGVNETRIKAI-GYGEEFPIAKDDENGLSEINRRVEF 312 Query: 337 LV 338 ++ Sbjct: 313 II 314 >gi|319778078|ref|YP_004134508.1| ompa/motb domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171797|gb|ADV15334.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 369 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 50/115 (43%), Gaps = 7/115 (6%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 +++ + F +S+ ++ +L ++ V+ + + GHTD+ + Sbjct: 252 RFAVLSRTGAIYFRTASARLDSQSRPLLAEVVGVVGKCPGLKVEVSGHTDSD---GSPIE 308 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 N RLS RA + ++ +G+ +I +G+ R +D + NRRI+ Sbjct: 309 NKRLSERRAQAVADAIVAAGIPRTQI-AATGYGEERPVADNDTPKNKALNRRIEF 362 >gi|161521586|ref|YP_001585013.1| hypothetical protein Bmul_5051 [Burkholderia multivorans ATCC 17616] gi|189352247|ref|YP_001947874.1| hypothetical protein BMULJ_03465 [Burkholderia multivorans ATCC 17616] gi|160345636|gb|ABX18721.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616] gi|189336269|dbj|BAG45338.1| putative flagellar motor protein [Burkholderia multivorans ATCC 17616] Length = 214 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L + A++ +++ K + L+G +A R ++ I + Sbjct: 42 QLRSKLEEAVRARQQEAQQRKTLEQALAGPLAAG----------RVTLVNGRIGIAGNLL 91 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S P+ +L+ + L +++ + G D R DNW LS Sbjct: 92 FALNSDQLQPDGRELLKTLAGPLAAYLKTRDQILMVSGFADDQQVRAGNRMFADNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +GV + + F + ++ D + NRR++I Sbjct: 152 KRALTVTRALIDAGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199 >gi|53716748|ref|YP_105773.1| hypothetical protein BMAA1115 [Burkholderia mallei ATCC 23344] gi|53722286|ref|YP_111271.1| hypothetical protein BPSS1264 [Burkholderia pseudomallei K96243] gi|67640638|ref|ZP_00439437.1| OmpA family protein [Burkholderia mallei GB8 horse 4] gi|76817712|ref|YP_335426.1| hypothetical protein BURPS1710b_A0267 [Burkholderia pseudomallei 1710b] gi|121597371|ref|YP_989733.1| hypothetical protein BMASAVP1_0116 [Burkholderia mallei SAVP1] gi|124383227|ref|YP_001024134.1| hypothetical protein BMA10229_0310 [Burkholderia mallei NCTC 10229] gi|126444000|ref|YP_001062783.1| hypothetical protein BURPS668_A1788 [Burkholderia pseudomallei 668] gi|126447861|ref|YP_001078471.1| hypothetical protein BMA10247_A1285 [Burkholderia mallei NCTC 10247] gi|126458362|ref|YP_001075736.1| hypothetical protein BURPS1106A_A1702 [Burkholderia pseudomallei 1106a] gi|134283770|ref|ZP_01770468.1| ompA family protein [Burkholderia pseudomallei 305] gi|167004053|ref|ZP_02269827.1| OmpA family protein [Burkholderia mallei PRL-20] gi|167723789|ref|ZP_02407025.1| hypothetical protein BpseD_32535 [Burkholderia pseudomallei DM98] gi|167742753|ref|ZP_02415527.1| hypothetical protein Bpse14_32062 [Burkholderia pseudomallei 14] gi|167819935|ref|ZP_02451615.1| hypothetical protein Bpse9_32712 [Burkholderia pseudomallei 91] gi|167828320|ref|ZP_02459791.1| hypothetical protein Bpseu9_31854 [Burkholderia pseudomallei 9] gi|167849768|ref|ZP_02475276.1| hypothetical protein BpseB_31255 [Burkholderia pseudomallei B7210] gi|167898369|ref|ZP_02485770.1| hypothetical protein Bpse7_31831 [Burkholderia pseudomallei 7894] gi|167906730|ref|ZP_02493935.1| hypothetical protein BpseN_31160 [Burkholderia pseudomallei NCTC 13177] gi|167915084|ref|ZP_02502175.1| hypothetical protein Bpse112_31676 [Burkholderia pseudomallei 112] gi|167922922|ref|ZP_02510013.1| hypothetical protein BpseBC_30487 [Burkholderia pseudomallei BCC215] gi|217418998|ref|ZP_03450505.1| OmpA family protein [Burkholderia pseudomallei 576] gi|226198078|ref|ZP_03793650.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9] gi|237510063|ref|ZP_04522778.1| OmpA/MotB domain protein [Burkholderia pseudomallei MSHR346] gi|242311463|ref|ZP_04810480.1| OmpA family protein [Burkholderia pseudomallei 1106b] gi|254174540|ref|ZP_04881202.1| ompA family protein [Burkholderia mallei ATCC 10399] gi|254183624|ref|ZP_04890216.1| ompA family protein [Burkholderia pseudomallei 1655] gi|254191105|ref|ZP_04897610.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237] gi|254193505|ref|ZP_04899939.1| ompA family protein [Burkholderia pseudomallei S13] gi|254200586|ref|ZP_04906951.1| OmpA family protein [Burkholderia mallei FMH] gi|254262357|ref|ZP_04953222.1| ompA family protein [Burkholderia pseudomallei 1710a] gi|254301765|ref|ZP_04969208.1| ompA family protein [Burkholderia pseudomallei 406e] gi|254356764|ref|ZP_04973039.1| OmpA family protein [Burkholderia mallei 2002721280] gi|52212700|emb|CAH38731.1| OmpA family membrane protein [Burkholderia pseudomallei K96243] gi|52422718|gb|AAU46288.1| ompA family protein [Burkholderia mallei ATCC 23344] gi|76582185|gb|ABA51659.1| ompA family protein [Burkholderia pseudomallei 1710b] gi|121225169|gb|ABM48700.1| ompA family protein [Burkholderia mallei SAVP1] gi|124291247|gb|ABN00517.1| ompA family protein [Burkholderia mallei NCTC 10229] gi|126223491|gb|ABN86996.1| OmpA family protein [Burkholderia pseudomallei 668] gi|126232130|gb|ABN95543.1| OmpA family protein [Burkholderia pseudomallei 1106a] gi|126240715|gb|ABO03827.1| ompA family protein [Burkholderia mallei NCTC 10247] gi|134244952|gb|EBA45048.1| ompA family protein [Burkholderia pseudomallei 305] gi|147748198|gb|EDK55273.1| OmpA family protein [Burkholderia mallei FMH] gi|148025791|gb|EDK83914.1| OmpA family protein [Burkholderia mallei 2002721280] gi|157811639|gb|EDO88809.1| ompA family protein [Burkholderia pseudomallei 406e] gi|157938778|gb|EDO94448.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237] gi|160695586|gb|EDP85556.1| ompA family protein [Burkholderia mallei ATCC 10399] gi|169650258|gb|EDS82951.1| ompA family protein [Burkholderia pseudomallei S13] gi|184214157|gb|EDU11200.1| ompA family protein [Burkholderia pseudomallei 1655] gi|217398302|gb|EEC38317.1| OmpA family protein [Burkholderia pseudomallei 576] gi|225929954|gb|EEH25969.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9] gi|235002268|gb|EEP51692.1| OmpA/MotB domain protein [Burkholderia pseudomallei MSHR346] gi|238521399|gb|EEP84851.1| OmpA family protein [Burkholderia mallei GB8 horse 4] gi|242134702|gb|EES21105.1| OmpA family protein [Burkholderia pseudomallei 1106b] gi|243060517|gb|EES42703.1| OmpA family protein [Burkholderia mallei PRL-20] gi|254213359|gb|EET02744.1| ompA family protein [Burkholderia pseudomallei 1710a] Length = 215 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +++++ K + L+ +A R ++ I + + Sbjct: 43 ELSSKLDAEVRQRQLESQRRKTLEQALAAPLAAG----------RVTLVNGRIGISGSVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S P +L+ + L + E++ + G D R DNW LS Sbjct: 93 FALNSDELQPAGRDLLKSLAGPLAAYLNANHEILMVSGFADDLQVRAGNRRFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336 RA + + + GV + + F + ++D + NRR++I Sbjct: 153 KRALTVTRAFIDEGVPASSVFAAA-FGSEQPVSPNSNDAGRAKNRRVEI 200 >gi|95930003|ref|ZP_01312743.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684] gi|95133972|gb|EAT15631.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684] Length = 176 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 7/108 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 T F+ E L + L + + GH D N L R Sbjct: 70 GTVYFEFDQYTLSAEARDTLAENMRYLQANPGTTLVIEGHCDER---GSDEYNLALGERR 126 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337 A +A Q L GV+ DR+S IS + + +++ + NRR + + Sbjct: 127 AVAAQQYLTSMGVATDRLSTIS-YGEEKPVDMASTEEAWAKNRRAEFV 173 >gi|330995812|ref|ZP_08319709.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841] gi|329574542|gb|EGG56107.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841] Length = 242 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 9/120 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARD-----N 284 + +F+ SSS L K + + + + + G+TD ++N N Sbjct: 111 DSGILFNTSSSALSSNATASLAKFASTVLNVNKDMDVAIKGYTDNQGWKNSTAAQSVQKN 170 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 LSL RA S L + GVS +I+ + G + NRR+++ + + Sbjct: 171 MDLSLQRANSVSNYLKQCGVSSTQITSVEGLGEADPVADNSTAAGREQNRRVEVYLYASE 230 >gi|255036344|ref|YP_003086965.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254949100|gb|ACT93800.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 502 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +I + L K+ E+L T + GHTDA N LS R +A Sbjct: 385 FDTDKAIIRNASKETLSKVVELLNMRTNCRIVLVGHTDAR---ASDAYNVSLSRRRVDAA 441 Query: 296 YQVLMKSGV-SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + L+++G+ RI + +R + + NRR++I + Sbjct: 442 KRFLVRAGLTDPSRIIA-EYYGEYRPIAENTTVEGLQSNRRVEIKILPNN 490 >gi|126732831|ref|ZP_01748624.1| hypothetical protein SSE37_02990 [Sagittula stellata E-37] gi|126706670|gb|EBA05743.1| hypothetical protein SSE37_02990 [Sagittula stellata E-37] Length = 605 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 62/194 (31%), Gaps = 19/194 (9%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + G+ + ++ P+ + RL D+ + Sbjct: 423 QQAGRTQNGIAMMHFNLPDVTIERSAPVERTPPPPPVVVDRLDDIRTALE---------- 472 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + V + ILI + F + + + IG VL I I G Sbjct: 473 -GQEVEVDVKNEWILIRLGSALR---FASGRAELENDLSALATAIGVVLNEQPGPIRIVG 528 Query: 271 HTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327 H+D+ P R + N LS RA + L+ + + + + G + Sbjct: 529 HSDSVPLSGRGRFKTNEELSQARAQTVTD-LVTANLDDKERVSVEGKGPVDPIADNATAE 587 Query: 328 -NSANRRIDILVED 340 + NRR++I++ Sbjct: 588 GRARNRRVEIMIRR 601 >gi|188995861|ref|YP_001930113.1| immunoreactive 23 kDa antigen [Porphyromonas gingivalis ATCC 33277] gi|188595541|dbj|BAG34516.1| immunoreactive 23 kDa antigen [Porphyromonas gingivalis ATCC 33277] Length = 223 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 10/146 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ L A + IL++ + +F +SS P + L K Sbjct: 70 KKMDKQKKELEAAVPDATIQTVNDGEAILVTF---DSGILFATNSSTLSPNSRTALTKFA 126 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + + + I I GHTD + + N LS RA S Y L GVS R+ G Sbjct: 127 ANMNKNPDTDIRIVGHTDNT---GSDKINDPLSERRAASVYSFLNSQGVSMSRM-AAEGR 182 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 H + + NRR+++ + Sbjct: 183 GSHEPVADNSTVAGRSANRRVEVYIL 208 >gi|229591493|ref|YP_002873612.1| hypothetical protein PFLU4061 [Pseudomonas fluorescens SBW25] gi|229363359|emb|CAY50495.1| putative outer membrane protein [Pseudomonas fluorescens SBW25] Length = 257 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 78/235 (33%), Gaps = 13/235 (5%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + Q + + E S D L TD + Sbjct: 23 PPENPQLLQARSQFSSLQQKPESNTLAAVETRIASNAVDRANQLSLHNRTDPQIDQLAYL 82 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV--KGVLFETTRTGILISII 229 L+++ I++ K +L ++A + + + + + T G +++ Sbjct: 83 ATQKIALAEQTIVSRKTDAQLDNIAVDRTQVQLDVRTAQLKALQAMKARPTERGQVVTFG 142 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288 D +FD + P + Q + L + E + G TD++ N LS Sbjct: 143 D----VLFDTGRAELKPGSQRDFQGLATFLLQNPERQVRVEGFTDST---GGDAFNQSLS 195 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 RA + + L + GV R+ + G+ + NRR++++V + Sbjct: 196 ERRAQAVARGLQQLGVGPQRM-AVMGYGKQFPVADNVSAQSRQLNRRVEVIVSND 249 >gi|329297799|ref|ZP_08255135.1| putative outer membrane lipoprotein [Plautia stali symbiont] Length = 177 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 10/142 (7%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SS+ P L + Sbjct: 37 YMDVQEAKLRDKMRGTGVSVTRQGDNIVLNM---PNNVTFDSSSANLKPAGANTLTGVAM 93 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G TD++ N RLS RA S L+ GV+++R+ + G Sbjct: 94 VLKEYPKAAVNVVGFTDST---GTRALNMRLSQQRAESVASALIVQGVAQNRL-RTQGMG 149 Query: 317 HHRLKIASDPMN--SANRRIDI 336 ++ + NRR++I Sbjct: 150 PDNPVASNSTEAGKAQNRRVEI 171 >gi|84684107|ref|ZP_01012009.1| OmpA/MotB domain protein [Maritimibacter alkaliphilus HTCC2654] gi|84667860|gb|EAQ14328.1| OmpA/MotB domain protein [Rhodobacterales bacterium HTCC2654] Length = 481 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 78/274 (28%), Gaps = 22/274 (8%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN-SVDLKIGSTNQKKQYQ 125 + G+ L + P + D++ D T L ++ Sbjct: 216 ELIYDAGEGLSAFGTVPENFDAPAMAEALGFTDIAGDTTTTFGMDAALPERLSDLPGLLP 275 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 LE Q S D ++T + + + P + Sbjct: 276 DLERLSLRDEGGQIIATGVASPGLDPGYVTSELRATLGDDARIEITAGDAPDDWVTRTNR 335 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 ++ + + I F S+ Sbjct: 336 ATGADQVASAGYWLPVYDFEISKQACNDAAAQVQAGRQIQ-----------FVTGSAELD 384 Query: 246 PETIVVLQKIGEVLAHSTE----VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 ++ ++ + +L H T+ ++I GHTD+ +N+RLS+ RA + L+ Sbjct: 385 TASMSIINDMAGLLLHCTDKIGMRVTIGGHTDSQ---GDDNENYRLSVARANAVRDALVA 441 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333 GV R+ + GF +D NRR Sbjct: 442 RGVPAGRMQAL-GFGETEPIADNDTEEGRAANRR 474 >gi|120600257|ref|YP_964831.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1] gi|146291813|ref|YP_001182237.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32] gi|120560350|gb|ABM26277.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1] gi|145563503|gb|ABP74438.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32] gi|319425048|gb|ADV53122.1| OmpA/MotB domain protein [Shewanella putrefaciens 200] Length = 228 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N F + VL + Sbjct: 88 YMDVQETKLRQQLASTGVSVTRNGDNIILNM---PNEVTFGVDQTELSDGASRVLNSVAL 144 Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V +++ G+TD+ N RLS RA LM G++ R+ G Sbjct: 145 VAKEYSKTQLNVLGYTDS---SGSDAYNLRLSQVRASEVANYLMSKGIAASRVKS-KGMG 200 Query: 317 HHRLKIASDPM--NSANRRIDILVE 339 ++ + NRR++I++ Sbjct: 201 KASPIASNASAEGRAQNRRVEIVLT 225 >gi|258622653|ref|ZP_05717674.1| putative lipoprotein [Vibrio mimicus VM573] gi|262171774|ref|ZP_06039452.1| outer membrane protein [Vibrio mimicus MB-451] gi|258585109|gb|EEW09837.1| putative lipoprotein [Vibrio mimicus VM573] gi|261892850|gb|EEY38836.1| outer membrane protein [Vibrio mimicus MB-451] Length = 223 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 12/146 (8%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + D+ V+ V + + + N F SS L+ + Sbjct: 84 DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSSSYQLDSYIHKTLRGVA 138 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + + GHTD++ N LS RA S L+ GV+ R G Sbjct: 139 RILVAYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRAFLLSQGVAAGRAIA-RGN 194 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 ++ NRR++I + Sbjct: 195 GERFPLCSNSTAEGRACNRRVEIQIL 220 >gi|167589926|ref|ZP_02382314.1| hypothetical protein BuboB_31618 [Burkholderia ubonensis Bu] Length = 215 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + A+K++++ K + L+G +A R ++ I + Sbjct: 42 QLTSKLEEAIKQRQQEAQQRKTLERALAGPLAAG----------RVTLVNGRIGIAGNVL 91 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S PE +L+ + L E++ I G D DNW LS Sbjct: 92 FALNSDQLQPEGKELLKTLAGPLSAYLKTRDEILMISGFADDQQVHAGNRLFADNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + + +GV + + F + ++ D + NRR++I Sbjct: 152 KRALTVTRAFIDAGVPAASVFAAA-FGSEQPVSSNADDAGRAKNRRVEI 199 >gi|213025961|ref|ZP_03340408.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 65 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 34/65 (52%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 K++ GSWKI YADFMT +MAFFLVMW+I+ + I +YF + Sbjct: 1 KRRRHKPHGGGAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAV 60 Query: 78 TASKG 82 T G Sbjct: 61 TGEIG 65 >gi|84685242|ref|ZP_01013141.1| OmpA domain protein [Maritimibacter alkaliphilus HTCC2654] gi|84666974|gb|EAQ13445.1| OmpA domain protein [Rhodobacterales bacterium HTCC2654] Length = 797 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 85/301 (28%), Gaps = 11/301 (3%) Query: 49 LVMWIINATDDDTKKAIEQYFNP--FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106 + + + + + + A+K + R + + Sbjct: 307 VTLVAPASVEQQNFDRVVGELEADLPDVFSLHATKTQAESTEGEGRPEFSATLSPEGQVQ 366 Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 + + + T + + ++ E+ + + D + Sbjct: 367 LRGRLGDEQQRTITESVARARFGMDKVYMAARLDENLPRGWSVRVLAAVEALSYLDNGVA 426 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 I + E L + + + + L + + + D + + + + Sbjct: 427 IVQPELVELRGKTGDPNANTEISRLLSEKLGEAQDYRVNVSYDEALDPIASLPSPEECVA 486 Query: 227 SIIDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 I + + F S + KI +VL E + I GHTD+ Sbjct: 487 MINETIAGSKITFAPGSVEIEASAAATIDKIADVLRDCAEVPMEIGGHTDSQ---GSEEL 543 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 N LS RA S L+ + I G+ +D NRRI+ + + Sbjct: 544 NKALSQQRANSVLNALLARRILTSNIVA-HGYGEEVPIADNDTEAGREANRRIEFRLISQ 602 Query: 342 Q 342 + Sbjct: 603 R 603 >gi|93005202|ref|YP_579639.1| OmpA/MotB [Psychrobacter cryohalolentis K5] gi|92392880|gb|ABE74155.1| OmpA/MotB [Psychrobacter cryohalolentis K5] Length = 392 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 10/140 (7%) Query: 210 NIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 V+ + + + I D+ + FD S + + K+ E + Sbjct: 243 GTPMNVVVDERGCPVPVDITDELKMELRVFFDNDKSAIKTQYKPEIAKVAEKMREYPNST 302 Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324 + GH + AR N RLS RA + +L G++ +R+S + G+ + + + Sbjct: 303 ARVEGHASKTGP--SARYNQRLSEARAVAVKSMLTNEFGIAPNRLSTV-GYGYDQPIADN 359 Query: 325 DPMNSA--NRRIDILVEDRQ 342 + NRR+ ++ + Sbjct: 360 NTEEGRAMNRRVYAIITGDK 379 >gi|313105860|ref|ZP_07792123.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa 39016] gi|310878625|gb|EFQ37219.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa 39016] Length = 169 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L S + + + GHTD N L RA + Sbjct: 70 FEYDSSDLKPEAMRALDVHAKDLKGSGQRVVLEGHTDER---GTREYNMALGERRAKAVQ 126 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + NRR+++ Sbjct: 127 RYLVLQGVSPAQLELVS-YGKERPVATGHDEQSWAQNRRVEL 167 >gi|115360144|ref|YP_777282.1| hypothetical protein Bamb_5401 [Burkholderia ambifaria AMMD] gi|115285432|gb|ABI90948.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 214 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 67/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + A++ +++ K + L+G +A R ++ I + Sbjct: 42 QLTSKLEEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGAVL 91 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S P+ +L+ + LA E++ I G D R DNW LS Sbjct: 92 FALNSDQLQPDGRDLLKTLAGPLAAYLTTRDEILMISGFADDQQVRAGNRQFADNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +GV + + F + ++ D + NRR++I Sbjct: 152 KRALTVTRALIDAGVPARSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199 >gi|207722387|ref|YP_002252823.1| outer membrane protein [Ralstonia solanacearum MolK2] gi|206587566|emb|CAQ18148.1| outer membrane protein [Ralstonia solanacearum MolK2] Length = 215 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 20/173 (11%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 LS +K+++ K + L+G +A R ++ I Sbjct: 39 AVQLELSSRLDQEVKQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGIS 88 Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNW 285 + +F +S PE +L+ + L E++ + G D DNW Sbjct: 89 GSVLFALNSDQLQPEGRELLKSLAGPLSAYLQSRDEILMVSGFADDQQVHAGNRRFADNW 148 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 LS RA + + L+ +G+ + + F + ++ D + NRR++I Sbjct: 149 ELSAKRALTVTRALIDAGIPGASVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 200 >gi|323497435|ref|ZP_08102453.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326] gi|323317518|gb|EGA70511.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326] Length = 222 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 69/217 (31%), Gaps = 14/217 (6%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 L+ + C+ + +++ G+ ST I + + + +++ + Sbjct: 7 ALAVAIALSGCQATQRQNATTGESETNSTTTGAIIGALAGAAVGVATGDDAKDRRKRALI 66 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-------FDKSSSIPL 245 + G D + + E +G+ + + + + F +S Sbjct: 67 GATGGAVVGGGVGYYFDKQEEALRQELLNSGVQVERVGENQLLLRLENGIGFATASHTLD 126 Query: 246 PETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 L + +L + + G TD++ N LS RA S L+ GV Sbjct: 127 SGIRNTLNGVARILVEYPDTSLVIDGFTDST---GSDTTNQLLSERRAESVRSYLVSQGV 183 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + R G + NRR++I + Sbjct: 184 AAGRAIA-RGNGERHPLCTNSTAEGRACNRRVEIQIL 219 >gi|255624443|ref|XP_002540477.1| Inner membrane lipoprotein yiaD precursor, putative [Ricinus communis] gi|223495460|gb|EEF21906.1| Inner membrane lipoprotein yiaD precursor, putative [Ricinus communis] Length = 225 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 71/196 (36%), Gaps = 11/196 (5%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + R ++ + ++ + ++ E + R + Sbjct: 27 NAARQRDEIRLQARTAEANQARMSAEQAKAQADQAKADADAARAQADAAANSAREEQAKN 86 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 + + + T G++I++ D +F+ + E + QK+ +VL Sbjct: 87 AALQQQLADLQAKQTDRGLIITLND----VLFNVDRAELSAEGMRTAQKLADVLLQEPQS 142 Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 V+ + G TD++ + N LS RA + L+ GV ++I G+ ++ Sbjct: 143 VVLVEGFTDST---GTSSHNLDLSQRRAEAVRNALIGLGVPGNKI-ATRGYGEAYPVASN 198 Query: 325 DPM--NSANRRIDILV 338 NRR++I++ Sbjct: 199 ADAGSRQLNRRVEIVL 214 >gi|170703354|ref|ZP_02894140.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|170131738|gb|EDT00280.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] Length = 243 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 64/222 (28%), Gaps = 7/222 (3%) Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 Q + Q + + + + + + Sbjct: 24 TTQSAPTYTVRAIKAPDQPGPVFRVTCEGLVSSTRSCDAAAQKVCAGKPVTLLQAVDRVR 83 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 ++ +++ VA V + + + + + F Sbjct: 84 RGAAMGDPRELTFMCGVPPQASVEPPVAAQPQPVVQTQPVAAPVAQRQVLLQGSANFTFD 143 Query: 241 SSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ P L + + +++ G+TD+ N RLS RA + L Sbjct: 144 SAALTPSARQELNRFLDANRDARFSRVTVTGYTDSQ---GAHAHNVRLSEARARAVATYL 200 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 G+ +R + + G +++ + NRR++I +E Sbjct: 201 RTGGLRAERFTTV-GKGAAEPVVSNATAEGRAQNRRVEIELE 241 >gi|304312291|ref|YP_003811889.1| hypothetical protein HDN1F_26630 [gamma proteobacterium HdN1] gi|301798024|emb|CBL46246.1| Hypothetical protein HDN1F_26630 [gamma proteobacterium HdN1] Length = 224 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 7/117 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNW 285 S+ ++ +F+ S S + + ++K+ +VL ISI GHTD A N Sbjct: 97 SVTITGDSILFESSQSNVSRKGMPFIRKVADVLNAYPRSSISIEGHTDNM---GEANYNQ 153 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340 +LS RA S L K+GV R+S +GF + + + NRR++I+V Sbjct: 154 KLSEARANSVMNALNKAGVESSRMSA-TGFGMSKPLVENTSSSNRRTNRRVEIVVTG 209 >gi|188575822|ref|YP_001912751.1| OmpA family membrane protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520274|gb|ACD58219.1| OmpA family membrane protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 438 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 12/158 (7%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-------RNTPMFDKSSSIP 244 L+ +A I + + + + E + + + MF S+ Sbjct: 278 LERVALPIPAAVRAATIPALAPLLAAEQRAGLLTVHTDGDGRSTVRLASASMFPSGSAEL 337 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG 303 + +L+++ L + + GHTD P R+ +DN+ LS RA S VL +G Sbjct: 338 DADQTHLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAESVGAVL-AAG 396 Query: 304 VSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338 + + R + SG + P + NRR++IL+ Sbjct: 397 LRDRRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434 >gi|154490195|ref|ZP_02030456.1| hypothetical protein PARMER_00427 [Parabacteroides merdae ATCC 43184] gi|154089087|gb|EDN88131.1| hypothetical protein PARMER_00427 [Parabacteroides merdae ATCC 43184] Length = 214 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 17/154 (11%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 K++ K++ +TL V + ++ + +F +SS + Sbjct: 59 KKMDKQKKELEATLPEETT------VETINNGEALKVTF---DSGILFATNSSTVSAASK 109 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSED 307 L+ + L + + I I GHTD + N LS RA S + LM+ GVS Sbjct: 110 SALRDLAASLNANPDTDIKIIGHTDNT---GKVDYNQTLSEKRAKSVFDYLMEDQGVSSK 166 Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 R+ G H + + NRR++IL+ Sbjct: 167 RM-TYEGKGVHEPVADNSTPEGRALNRRVEILIL 199 >gi|117621166|ref|YP_856420.1| OmpA family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562573|gb|ABK39521.1| OmpA family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 162 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 7/114 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288 D N +F ++ P+T VV++K+G+ L I GHTD+ A N +LS Sbjct: 52 DFSNRVLFANNADALTPKTRVVVEKLGKTLQEVGLNRARIDGHTDS---NGAADYNDQLS 108 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 RA S VL+ G+ + + I G + + NRR+ I++ + Sbjct: 109 YKRAQSVADVLVSVGMPQANLD-IRGRGERDPIADNKTAAGRAENRRVAIVISN 161 >gi|322418107|ref|YP_004197330.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18] gi|320124494|gb|ADW12054.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18] Length = 196 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 13/175 (7%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 ++ P ++ A + K + + + +VA ++ + T Sbjct: 30 TEEQAPAVTAPSTETAKPAREAKPEQKAPVTEQTPVREPVVAQDLRETTKAPATD----- 84 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285 + Q F+ SS E+ L + E L+ + I G+ D N Sbjct: 85 -LQSQLQKVYFNFDSSDLSEESRNTLSRNAEYLSKQGSLKVLIEGNCDER---GSDDYNM 140 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338 L RA +A L+ G++ +RIS IS + + + + NRR + +V Sbjct: 141 ALGERRAKAAKDYLVNLGIASERISTIS-YGEEKPADPGHDEAAWAKNRRAEFVV 194 >gi|172065209|ref|YP_001815921.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6] gi|171997451|gb|ACB68368.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 220 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F S++ L K+ + + G+TDA+ N LS R Sbjct: 114 GDAYFATDSAVLTSAATAALDKLLNQQGDRHFARVEVDGYTDAT---GSDAHNQALSKRR 170 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 A + L G+ D +G ++D + NRR++I ++ Sbjct: 171 ADAVAAYLRGHGLKADAF-AATGHGEANPAASNDTVEGRARNRRVEISLQK 220 >gi|153868783|ref|ZP_01998526.1| outer membrane OmpA family protein [Beggiatoa sp. PS] gi|152074626|gb|EDN71462.1| outer membrane OmpA family protein [Beggiatoa sp. PS] Length = 533 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 79/232 (34%), Gaps = 16/232 (6%) Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 K+ N+ + + S ++ ++ + + + Sbjct: 20 PKVEPGTTAAYQALFLNSQGIIMAAGAKRGQNASGDQNGGFFTQGFLTSLKTELESPHPS 79 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + + ++ + ++ ++ I + + DN L +DQ Sbjct: 80 WDTIMANTKEWVQEQKPSQIPQTQVAIQVIGNNIGDDNEYLPPLPSEPTVTTRKLTVDQ- 138 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE----VISIRGHTDASPFRNIARDNWRLS 288 FD +S+ P LQ+ + L S + + GHTD+ +N LS Sbjct: 139 ----FDTNSAELKPFHKSQLQQWEQGLTSSKSLTPPSVRVEGHTDSR---GTDENNMTLS 191 Query: 289 LDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 RA S + L++ G S DR I + +L + + NRR++I+ Sbjct: 192 ERRATSVKKHLVEELGASSDRFDIIP-YGESQLTASEETEEGRALNRRVEIV 242 >gi|27462205|gb|AAO15380.1|AF330622_1 outer membrane protein [Helicobacter bizzozeronii] Length = 172 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + F +SS P+ VL++ E L ++ GH D N L R Sbjct: 62 DRVFFSLNSSSIEPDAEHVLKRQAEWLLRYPHYFVTVEGHADDR---GTREYNLALGQRR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 + + L+ GVS R+ IS + R + + NRR+ + + +G Sbjct: 119 SVAVRDYLVSLGVSSQRMRTIS-YGKERPVAVCDDNSCWNQNRRVVLTINSVKG 171 >gi|39996844|ref|NP_952795.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA] gi|39983732|gb|AAR35122.1| OmpA domain protein [Geobacter sulfurreducens PCA] gi|298505859|gb|ADI84582.1| OmpA family outer membrane protein [Geobacter sulfurreducens KN400] Length = 524 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 36/109 (33%), Gaps = 9/109 (8%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDR 291 FD E L ++ E + + I GH D N LSL R Sbjct: 413 DVSFDFDQWSLSAEGKKALSEVAEQIRRDKRWVYLRIDGHADNIGSVG---YNMDLSLKR 469 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 A S L+ G+ R+ + G + + NRR +IL Sbjct: 470 AISVASYLIAREGIDPSRLF-VKGLGKSKPIGDNKTAEGRKLNRRGEIL 517 >gi|171319197|ref|ZP_02908315.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] gi|171095577|gb|EDT40539.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] Length = 214 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 67/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + A++ +++ K + L+G +A R ++ I + Sbjct: 42 QLTSKLEEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGAVL 91 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S PE +L+ + LA E++ + G D R DNW LS Sbjct: 92 FALNSDQLQPEGRDLLKTLAGPLAAYLTTRDEILMVSGFADDQQVRAGNRQFADNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +GV + + F + ++ D + NRR++I Sbjct: 152 KRALTVTRALIDAGVPARSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199 >gi|159045920|ref|YP_001534714.1| chemotaxis protein MotB [Dinoroseobacter shibae DFL 12] gi|157913680|gb|ABV95113.1| chemotaxis protein MotB [Dinoroseobacter shibae DFL 12] Length = 272 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 1/135 (0%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 + +IIK+K + ++ G+WK+ YADF+T +MAFF++MW++NAT + +K I YF Sbjct: 4 DTPAPVIIKRKKVVAGGGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGIADYF 63 Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDL-SIDEHITKNSVDLKIGSTNQKKQYQRLE 128 NP + G S + + + S L+ ++ + Q L Sbjct: 64 NPTIPVNRISGGGEGMFGGDNIFSDVSLARSGTGGSENSSRSSQLEALRAAEEARMQALS 123 Query: 129 NNIFYLSNSQQSEHC 143 ++ LS Sbjct: 124 EDLLGLSGESDVAEQ 138 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 1/186 (0%) Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 ++ L +S E + A + + + + VA+ + + Sbjct: 83 DNIFSDVSLARSGTGGSENSSRSSQLEALRAAEEARMQALSEDLLGLSGESDVAEQLRRH 142 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274 V T G+++ + DQ +F S+ +L+ I EV + +SI GH + Sbjct: 143 VSTRVTDRGLVVDLFDQGEATVFVPGSTELTLLGKALLKVIHEVFSVVDNPLSITGHVPS 202 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 P RD W +S RA+ A L G +E RI K++G A + D ++S N R+ Sbjct: 203 QPVVLRERDAWEVSTSRAHVARSTLESYGFAESRIMKVAGQADRKPAAYPD-ISSKNNRL 261 Query: 335 DILVED 340 +I++ Sbjct: 262 EIVLLR 267 >gi|242309734|ref|ZP_04808889.1| chemotaxis protein motB [Helicobacter pullorum MIT 98-5489] gi|239523735|gb|EEQ63601.1| chemotaxis protein motB [Helicobacter pullorum MIT 98-5489] Length = 258 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 11/172 (6%) Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 P+ I A + ++ + + + + V FE GI+I I + Sbjct: 71 PPQPIQATPIQAETEMDNVMNIFASLITEYNEINKLANGPAVEFEEAEKGIIIRIPEDL- 129 Query: 234 TPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVISIR--GHTDASPFR--NIARDNWRLS 288 +F+ S+ I L++I L H + I I+ GHTD +P + DN LS Sbjct: 130 --LFESGSATLSNSNGITFLKRISLELNHLPKEILIKAIGHTDNTPMKKNATFADNLELS 187 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 + R + +L+ G+ ++RI G +D + + NRR+D+ V Sbjct: 188 IARGVNVANLLISQGIDKERII-GGGEGEFSPIANNDIPELRAKNRRVDLYV 238 >gi|149188853|ref|ZP_01867143.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1] gi|148837273|gb|EDL54220.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1] Length = 217 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 6/106 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + P L ++ + L I+I GHTD++ N L L RA + Sbjct: 107 FGFDQANLTPMGDEALNRLADTLGKQASNITIDGHTDST---GPEGYNQALGLKRALTTS 163 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L+ GV ++ I + F + + + NRR +I V Sbjct: 164 DGLISKGVDKNHIV-VRSFGETKPIATNSTTEGRAQNRRSEIWVSS 208 >gi|73537739|ref|YP_298106.1| hypothetical protein Reut_B3905 [Ralstonia eutropha JMP134] gi|72121076|gb|AAZ63262.1| OmpA/MotB [Ralstonia eutropha JMP134] Length = 215 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 24/177 (13%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + L KE + +R + L K +++ L+ + + Sbjct: 39 GAQMELTARLEKEAKQRQEEMQRRESLEKALAAPLAAGRVTLVNGRIGIN---------- 88 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---A 281 + +F +S P+ VL+ + L E++ + G TD R Sbjct: 89 ----GSVLFAINSDQLQPQGRDVLKSLAGPLSAYLRSRDEILMVSGFTDDQQVRERNRRF 144 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 DNW LS RA + + L+ +G+ + + F + ++ + + NRR++I Sbjct: 145 ADNWELSAQRALTVTRALIDAGIPAASVFSAA-FGAEQPVTSNADEAGRARNRRVEI 200 >gi|300714997|ref|YP_003739800.1| outer membrane protein [Erwinia billingiae Eb661] gi|299060833|emb|CAX57940.1| Outer membrane protein [Erwinia billingiae Eb661] Length = 564 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 8/115 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 I+ + +FD ++ P ++ +L + I + GHTD++ N + Sbjct: 426 IVRLDSLSLFDTGKAVLKPGSLKMLVTALVDIKARPGWLIVVAGHTDST---GNVLANQQ 482 Query: 287 LSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 LSL RA + L S VS + GF R +D + NRR++I + Sbjct: 483 LSLTRADALRDWMLSTSDVSPT-CFAVQGFGASRPIATNDTPAGRALNRRVEISL 536 >gi|111223535|ref|YP_714329.1| hypothetical protein FRAAL4134 [Frankia alni ACN14a] gi|111151067|emb|CAJ62776.1| conserved hypothetical protein; putative OmpA/MotB domain [Frankia alni ACN14a] Length = 252 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 73/259 (28%), Gaps = 18/259 (6%) Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 S + T + + + L Q + Sbjct: 4 AGGCGGSPGSRGDASTAPRTSRAAATAQPAASTPSADPSASALPPGAQPGLHDVTGDGTP 63 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + ++ + E + L L L+G+ +N+ Sbjct: 64 DPTCGTQDFGAGLVLRLPCGDFSQYAHTPEDGTRLVAN-SLYRLPGPDDVDLTGISGENL 122 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 ++ + +T F S+ L TI ++ I +RGH Sbjct: 123 AATDAAGRETFILIFNSDALFDTGSFAIGSTDTLDATIRLINSHYA-----GGDIQVRGH 177 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------- 324 TDA+ A N LS RA + + L+ G+ ++ + G Sbjct: 178 TDAT---GSAASNQTLSERRADTVRRYLVDHGIRASSVTSV-GLGSTHPLAEEANPDGSP 233 Query: 325 DPMNSA-NRRIDILVEDRQ 342 DP NRR++++V Q Sbjct: 234 DPEGQRFNRRVELVVRSHQ 252 >gi|325927851|ref|ZP_08189076.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas perforans 91-118] gi|325541841|gb|EGD13358.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas perforans 91-118] Length = 368 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293 MF S+ + +L+++ L + + GHTD P R+ +DN+ LS RA Sbjct: 258 SMFPSGSAELDADQTRLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAQ 317 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338 S VL +G+ + R + SG + P + NRR++IL+ Sbjct: 318 SVGAVL-AAGLRDPRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 364 >gi|300698137|ref|YP_003748798.1| transmembrane protein, OmpA/MotB motif [Ralstonia solanacearum CFBP2957] gi|299074861|emb|CBJ54429.1| putative transmembrane protein, OmpA/MotB motif [Ralstonia solanacearum CFBP2957] Length = 215 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 20/173 (11%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 LS +K+++ K + L+G +A R ++ I Sbjct: 39 AVQLELSSRLDQEVKQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGIS 88 Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNW 285 + +F +S PE +L+ + L E++ + G D DNW Sbjct: 89 GSVLFALNSDQLQPEGRELLKSLAGPLSAYLQSRDEILMVSGFADDQQVHAGNRRFADNW 148 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 LS RA + + L+ +G+ + + F + ++ D + NRR++I Sbjct: 149 ELSAKRALTVTRALIDAGIPGASVFAAA-FGSEQPVGSNADDEGRAKNRRVEI 200 >gi|167572993|ref|ZP_02365867.1| hypothetical protein BoklC_24368 [Burkholderia oklahomensis C6786] Length = 215 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS +K+++ K + L+G +A R ++ I + + Sbjct: 43 ELSSRLDAEVKQRQMETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGSVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S P +L+ + L + E++ + G D R DNW LS Sbjct: 93 FALNSDELQPAGRDLLKSLAGPLAAYLKANREILMVSGFADDQQVRAGNHRFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + + GV + + F + + D + NRR++I Sbjct: 153 KRALTVTRAFIAEGVPASSVFAAA-FGSEQPVSPNSDDEGRAKNRRVEI 200 >gi|28868377|ref|NP_790996.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213967171|ref|ZP_03395320.1| ompA family protein [Pseudomonas syringae pv. tomato T1] gi|301381094|ref|ZP_07229512.1| ompA family protein [Pseudomonas syringae pv. tomato Max13] gi|302062421|ref|ZP_07253962.1| ompA family protein [Pseudomonas syringae pv. tomato K40] gi|302133214|ref|ZP_07259204.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851615|gb|AAO54691.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213928013|gb|EEB61559.1| ompA family protein [Pseudomonas syringae pv. tomato T1] gi|330965011|gb|EGH65271.1| ompA family protein [Pseudomonas syringae pv. actinidiae str. M302091] gi|331018068|gb|EGH98124.1| ompA family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 229 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A GV + I + + F SS L + L Sbjct: 87 DKQEAALRASMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLANSL 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L GV + + + G Sbjct: 144 KQFNQNNIEIIGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199 Query: 319 RLKIASDPM--NSANRRIDILVEDRQG 343 + ++ + NRR+++ ++ G Sbjct: 200 QPIASNADANGRAQNRRVEVNLKPIPG 226 >gi|115523809|ref|YP_780720.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115517756|gb|ABJ05740.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53] Length = 446 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ E++ VL+K+G +L I + GHTD N LS RA + Sbjct: 343 FQPRSAEISKESLPVLEKLGAILVQCPAVTIEVAGHTD---GGGKKAKNQALSERRAEAV 399 Query: 296 YQVLMKS--GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L K+ GV +++ + G+ + ++D NRRI+ +V+ Sbjct: 400 VASLTKAKIGVGSAKLTAV-GYGSAKPIASNDTPEGRANNRRIEFVVK 446 >gi|303240559|ref|ZP_07327075.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2] gi|302591961|gb|EFL61693.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2] Length = 556 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 61/186 (32%), Gaps = 14/186 (7%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 E S E++L + A + + Sbjct: 381 SQEVSSKGYLGNVKNSEGIEELLVGAVDSEISGSASQAEEKKKEFKQQDAQSIEKNTERV 440 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280 + I +D + E+I VL ++ E+L+ E I HTD Sbjct: 441 AKVDIP------PVYYDSGKATVKAESIAVLNQVKEMLSQFPEYYLIIDAHTDTV---GN 491 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDIL 337 +N +LS DRA + L++ GV E RI G+ R + + + NRR + + Sbjct: 492 NENNLKLSKDRADEVKKYLVQKGVDEKRIIA-RGWGEDRPIVPKESTEGDKAKNRRTEFI 550 Query: 338 VEDRQG 343 + G Sbjct: 551 LTREIG 556 >gi|149916697|ref|ZP_01905199.1| OmpA domain protein [Plesiocystis pacifica SIR-1] gi|149822414|gb|EDM81803.1| OmpA domain protein [Plesiocystis pacifica SIR-1] Length = 520 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 61/235 (25%), Gaps = 11/235 (4%) Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 + +G K + + + ++ Sbjct: 280 LSFTLGRQKPKPIVPEDPDRDKDGFENAVDSCPDTPGVSPDGCPPRDTDEDGWIDTEDEC 339 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 I L D I + + Sbjct: 340 PYEAGVEPDGCPIRDTDGDGILDDTDACIDE---PEKVNGYKDEDGCPDEVPIAVREFTG 396 Query: 231 QRNTPMFDKSSSIPLPE-TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288 F+ +S+ + VL +VL E+ + GHTD N +LS Sbjct: 397 VIEGIEFEYNSATIREGKSKEVLDAAIKVLEEYPEIRIKVVGHTDNQ---GTPEYNKKLS 453 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 DRA + Q L + G++EDRI G ++ + NRR + + + Sbjct: 454 TDRADAVKQYLAEGGIAEDRIETF-GAGQSDPLTTNETEEGRAKNRRTEFEIIKK 507 >gi|71733414|ref|YP_273324.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|289627857|ref|ZP_06460811.1| ompA family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648335|ref|ZP_06479678.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|71553967|gb|AAZ33178.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|330868443|gb|EGH03152.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330988549|gb|EGH86652.1| ompA family protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008919|gb|EGH88975.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 229 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A GV + I + + F SS L + L Sbjct: 87 DKQEAALRASMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLANSL 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L GV + + + G Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199 Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR+++ ++ G Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226 >gi|254254994|ref|ZP_04948311.1| Flagellar motor protein [Burkholderia dolosa AUO158] gi|124899639|gb|EAY71482.1| Flagellar motor protein [Burkholderia dolosa AUO158] Length = 214 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + A++ +++ K + L+G +A R ++ I + Sbjct: 42 QLTSQLDEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGNVL 91 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S PE +L+ + L E++ + G D R DNW LS Sbjct: 92 FALNSDQLQPEGRALLKTLAGPLAAYLKTRDEILMVSGFADDQQVRAGNRLFADNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +GV + + F ++ D + NRR++I Sbjct: 152 KRALTVTRSLIDAGVPASSVFAAA-FGSEHPVSSNADDEGRAKNRRVEI 199 >gi|85712856|ref|ZP_01043898.1| OprF [Idiomarina baltica OS145] gi|85693320|gb|EAQ31276.1| OprF [Idiomarina baltica OS145] Length = 362 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 66/200 (33%), Gaps = 8/200 (4%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + D +G N P + + ++ D Sbjct: 153 EGGVQQGFDEDYTEGFANVGLQYFFGGRNAVTEAKPRPAAAQPTETTPAPQQTMDSDNDG 212 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 AD + + T + ++ FD SS + + + ++ E + Sbjct: 213 VIDSRDKCADTPRRYSVDADGCTMYENETVREQLLVEFDFDSSQVRKDAMEPIAEMAEFM 272 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAH 317 + ++I GHTD A N LS RA S VL++ G+S RI+ + G Sbjct: 273 NEHPQLDLTIHGHTDKI---GDAEYNQWLSQRRAESVKNVLVESYGISASRINTV-GHGE 328 Query: 318 HRLKIASDP--MNSANRRID 335 + K+ D NRRI+ Sbjct: 329 SQPKVKGDSPADRQENRRIE 348 >gi|153834734|ref|ZP_01987401.1| inner membrane lipoprotein YiaD [Vibrio harveyi HY01] gi|148868823|gb|EDL67889.1| inner membrane lipoprotein YiaD [Vibrio harveyi HY01] Length = 222 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 60/208 (28%), Gaps = 9/208 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +Q+ +S L + + I A Sbjct: 18 QATQRQNATTGEYETNSTTQGALIGAIAGAAIGLAVGDNAKERRKGALIGAAAGGATGAG 77 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + L + GV E L ++ N F SS L+ Sbjct: 78 VGYYFDQQEAELRRALLNSGVQVERVGENQL--LLRMENGIGFSSSSYQLDSSIHNTLRG 135 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + + G+TD++ N LS RA S Q L+ V+ R Sbjct: 136 VARILVEYPDTSLVIDGYTDST---GSDSYNQTLSERRAESVRQYLVSQNVAPGRAIA-R 191 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339 G+ ++ NRR++I + Sbjct: 192 GYGERNPICSNQTSEGRACNRRVEIQIL 219 >gi|83643665|ref|YP_432100.1| outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] gi|83631708|gb|ABC27675.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] Length = 494 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 70/234 (29%), Gaps = 12/234 (5%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + ++ Q + +E L ++ E Sbjct: 265 EARLAEAVQPVVSEIPFEKGSAQVKESINEALNRLQQEKLTLRHALTEAEVREVQSAASL 324 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + ++ + ++ ++I + + +LI Sbjct: 325 ETMKQEMEQKLLAVQLETDAVKRANEEIQRRFEFVQELFTLTEADVYRQNANVLIRAHGF 384 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 + F SS + + +L KI + + I GHTD N LS Sbjct: 385 K----FASGSSEVQRDNVTLLNKIIDAIEAFPNCKIRISGHTDNR---GDRALNQSLSEK 437 Query: 291 RAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA + + L G + RI GF R +D +ANRR+++L+ + Sbjct: 438 RASNVAKFLANVGSIDSSRIEA-EGFGASRPVANNDTKEGRAANRRVEVLIIND 490 >gi|315123150|ref|YP_004065156.1| hypothetical protein PSM_B0207 [Pseudoalteromonas sp. SM9913] gi|315016910|gb|ADT70247.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913] Length = 426 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 7/151 (4%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + +++ L + + V GI I+I + +F + S LP Sbjct: 276 NQTVDKKDQQLRVLEQLLQTEIKMGIVAVAKNSDGIRITINSEN---LFKQGDSQLLPSF 332 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSED 307 +L+K+ L + + I GHTD P NW LSL RA ++ KS Sbjct: 333 QPILEKLALSLEGTKGRVLITGHTDDLPISTDKYPSNWHLSLARATQVANLMAKSTNLSG 392 Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDI 336 R+ G ++ S NRRI+I Sbjct: 393 RLWP-EGKGAAEPIASNSDSASRSLNRRIEI 422 >gi|225024496|ref|ZP_03713688.1| hypothetical protein EIKCOROL_01371 [Eikenella corrodens ATCC 23834] gi|224942771|gb|EEG23980.1| hypothetical protein EIKCOROL_01371 [Eikenella corrodens ATCC 23834] Length = 217 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 18/121 (14%) Query: 234 TPMFDKSS---SIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288 +F P L ++ L I++ GHTD + N LS Sbjct: 97 DVLFAFDRSSEQDLQPRGREELTELAAQLRNFEQLNSITVIGHTD---YLGSDAYNQNLS 153 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-------NRRIDILVE 339 RA + + L G+ D+I + G + + S NRR++I V+ Sbjct: 154 QQRAETVRRYLAAQGLPADKIRAV-GMGESQPVKQCDNHGGRSQLIACLQPNRRVEIQVD 212 Query: 340 D 340 Sbjct: 213 G 213 >gi|77918775|ref|YP_356590.1| MotB-like flagellar protein [Pelobacter carbinolicus DSM 2380] gi|77544858|gb|ABA88420.1| MotB-like flagellar protein [Pelobacter carbinolicus DSM 2380] Length = 247 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 10/159 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 A + L ++ S L+ L D + + R +++ + D +FD S+ Sbjct: 76 APMDDDYVSRLYNRVQSMLARLRID---RDIDLVKDRGAVILRVKDA---ILFDAGSTEL 129 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P + +L+++ ++ ++ I GHTD N A NW +S+ RA + + + Sbjct: 130 KPTALPILREVAGLVKPLPLLLRIEGHTDNQKPANPAITNWDISVQRAVAVLKFFAGEDL 189 Query: 305 SE-DRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 DR+S + G+ R + NRR++ ++E+ Sbjct: 190 LPLDRLSAV-GYGDQRPVAPGLGPEQQALNRRVEFVLEN 227 >gi|317491882|ref|ZP_07950317.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920316|gb|EFV41640.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 163 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 7/117 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 + +F + S PE+ ++K+G+ LA + G TD N + Sbjct: 51 MFGLSEKVLFGNNKSNLTPESTETVKKMGKTLAQINILHARLDGFTDNY---GDESYNQQ 107 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 LSL RA + L + G+ ++ G ++ S NRR+ I++E Sbjct: 108 LSLKRANTVADALSQGGIPRMNLTT-RGMGESHPIASNSTKQGRSENRRVAIVIEAP 163 >gi|183222506|ref|YP_001840502.1| hypothetical protein LEPBI_I3161 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912543|ref|YP_001964098.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777219|gb|ABZ95520.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780928|gb|ABZ99226.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 475 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 78/264 (29%), Gaps = 9/264 (3%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 T + E+ PE I + T + + + ++ + Sbjct: 215 TGTVFFNAEKGVPEFKEVKLSYTFIYPNGTVQEANFLVKGVYFLRNQVNAKDKESIREDI 274 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + + + N+ LPP S E Sbjct: 275 LNDLIVGYTRDGLPNGKRIQKRQRPGLGDPNQNLEGRLPPQSTEIPEMTDGVTHPDVKEN 334 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + D I+ ++ +FD + S + + KI E Sbjct: 335 P---DPNSPIDDPNQIAEQLPVKVRTTEDGIVFSLDSILFDFNDSKLKVDAESAVAKIAE 391 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 +L + I + GHTD N +LS +RA S L+ + +++ G+A Sbjct: 392 ILKKYPDREIRVSGHTDNI---GKKEYNQKLSEERAKSVLHSLVDNHKMDEKHISFRGYA 448 Query: 317 HHRLKIASDPMNSA--NRRIDILV 338 +D + NRR++I + Sbjct: 449 DEFPVAPNDSEENRHKNRRVEITL 472 >gi|226945712|ref|YP_002800785.1| peptidoglycan-associated outer membrane lipoprotein [Azotobacter vinelandii DJ] gi|226720639|gb|ACO79810.1| peptidoglycan-associated outer membrane lipoprotein [Azotobacter vinelandii DJ] Length = 179 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L L + + + GHTD N L RA + Sbjct: 80 FEYDSSDLKPEAMRALDVHARDLKGNGARVVLEGHTDER---GTREYNMALGERRAKAVQ 136 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 + L+ GVS ++ +S + R A + + NRR+++ Sbjct: 137 RYLVLQGVSPAQLELVS-YGEERPVAGGADEQSWAQNRRVEL 177 >gi|313201307|ref|YP_004039965.1| ompa/motb domain-containing protein [Methylovorus sp. MP688] gi|312440623|gb|ADQ84729.1| OmpA/MotB domain protein [Methylovorus sp. MP688] Length = 222 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 7/116 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLS 288 D + FD S P VL + L A+ ++I GHTD + N LS Sbjct: 104 DIPSDISFDSGKSDIKPNFRPVLDSFAQSLVANPATKVTIVGHTDNT---GTDAVNNPLS 160 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+RA A L+ GV+ R + G H + ++ + NRR++I V + Q Sbjct: 161 LNRANHARDYLVTRGVASSRFTT-EGRGSHEPLVENNSDANRAKNRRVEIFVAEPQ 215 >gi|254411320|ref|ZP_05025097.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420] gi|196181821|gb|EDX76808.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420] Length = 293 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 86/261 (32%), Gaps = 14/261 (5%) Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 GI P + + L + H + + +T QQ + Sbjct: 44 GIVLATFYPRTNPEKPFFLKMASHFEEQMPVVSPHTTPTSIPEPTGSPPQLTPVQRQQVQ 103 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 L + + +++ ++ L + + ++ Sbjct: 104 AQLTQLQGQLRSLSEGVATLEVQLGSSRPNESLEARLQAIALQLEGVQPPPEEATSN--- 160 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + A + + + +++ +F+ ++S+ PE ++L KI L + Sbjct: 161 -GNNPNATVMAASSDSFGSSQTLKVTLPSD---VLFEGNNSLLRPEAGLILDKIIADLRN 216 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 I I HTD+ DN LS RA + Q ++ + R + G+ R Sbjct: 217 YPSSTIRIAAHTDSQ---GEPEDNRELSFRRAKAVEQYFARALGDDYRWL-VVGYGEIRP 272 Query: 321 KIASDPMN--SANRRIDILVE 339 +A+D NRRI+I VE Sbjct: 273 LVANDTDANQQRNRRIEISVE 293 >gi|330961787|gb|EGH62047.1| ompA family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 229 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A GV + I + + F SS L + L Sbjct: 87 DKQEAALRASMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLANSL 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L GV + + + G Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199 Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR+++ ++ G Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226 >gi|167576586|ref|ZP_02369460.1| unnamed protein product; Similar to putative exported protein [Burkholderia thailandensis TXDOH] Length = 541 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%) Query: 236 MFDKSSSIPLPETIVVLQKI--GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F + P + + +LA+ + + I GH+D+ N +LS RA Sbjct: 424 LFATGQATFSPGAVQRELQHALRMILANPEQRVLIVGHSDS---AGSDAVNLQLSKARAR 480 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + + GV + R + G + + NRR++IL+ Sbjct: 481 AIRDWFVDQGVLKTRFI-VQGAGDTHPVADNASPLGRALNRRVEILLIPD 529 >gi|302189107|ref|ZP_07265780.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642] Length = 229 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV + I + + F SS L + L Sbjct: 87 DKQEAALRESMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L GV + + + G Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199 Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR+++ ++ G Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226 >gi|294673757|ref|YP_003574373.1| OmpA family protein [Prevotella ruminicola 23] gi|294474249|gb|ADE83638.1| OmpA family protein [Prevotella ruminicola 23] Length = 226 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 7/149 (4%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ A + + + +F + + + LQ+ Sbjct: 70 KKMDKAKKEAEAVKNAQVETITDANGLEAVKVTFDSG-ILFATNKADLNASSKSSLQQFA 128 Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL +++ I GHTD + N LS++RA S L GV +I + G Sbjct: 129 TVLKNNSACDVAIYGHTDNT---GSDAINNPLSVNRAKSVSNYLKSLGVPASQIKSVDGQ 185 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + NRR+++ + + Sbjct: 186 GSTNPVADNSTAEGRKQNRRVEVYMYASE 214 >gi|163855060|ref|YP_001629358.1| putative lipoprotein [Bordetella petrii DSM 12804] gi|163258788|emb|CAP41087.1| putative lipoprotein [Bordetella petrii] Length = 215 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD ++ P + VL + L E + GHTD++ A N LS + Sbjct: 105 PSNVSFDTDKAVLKPALLPVLDSVARALNQHPELRAKVVGHTDST---GSAAHNQTLSEN 161 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S L K GV+ R+ I G A + NRR+++ + Sbjct: 162 RARSVTDYLGKQGVAPARM-TIEGRAARDPIGDNATAEGRAANRRVEVYL 210 >gi|187919198|ref|YP_001888229.1| hypothetical protein Bphyt_4485 [Burkholderia phytofirmans PsJN] gi|187717636|gb|ACD18859.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 215 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +K+++ K + L+G +A R ++ I + Sbjct: 43 ELSSKLEQEVKQRQLETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGNVL 92 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPFRN---IARDNWRLSL 289 F +S P+ +L+ + L+ + G TD R DNW LS Sbjct: 93 FALNSDQLQPQGRDLLKSLAGPLSAYLGANDEILMVSGFTDDQRLREGNRRFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ GV + + F + ++ + + NRR++I Sbjct: 153 QRALTVTRALIDDGVPASSLFAAA-FGSGQPVSSNTDEQGRAKNRRVEI 200 >gi|261210647|ref|ZP_05924939.1| outer membrane protein [Vibrio sp. RC341] gi|260840132|gb|EEX66712.1| outer membrane protein [Vibrio sp. RC341] Length = 223 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 12/146 (8%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + D+ V+ V + + + N F SS L+ + Sbjct: 84 DQQEAELRKALLDSGVQVVRVGENQLLLRME-----NGIGFTSSSYQLDSYIHKTLRGVA 138 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + + GHTD++ N LS RA S L+ GV+ R G Sbjct: 139 RILVEYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRAFLLAQGVAAGRAIA-RGN 194 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 ++ NRR++I + Sbjct: 195 GERFPLCSNSTAEGRACNRRVEIQIL 220 >gi|163741717|ref|ZP_02149107.1| OmpA family protein [Phaeobacter gallaeciensis 2.10] gi|161384890|gb|EDQ09269.1| OmpA family protein [Phaeobacter gallaeciensis 2.10] Length = 183 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 48/139 (34%), Gaps = 11/139 (7%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + V + +I + F + L++ + Sbjct: 50 VMDDGAEGFMTPHVTRDGKPVCRRGNICGVMPSDQFFATNRHRISAAGQQRLREFFQTAN 109 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + I GHTD+ N RLS RA + +V G RI ++ G+ Sbjct: 110 ARS--FIITGHTDSR---ASDEYNMRLSQRRANAVAKVGQSVG---ARILEVRGYGERDP 161 Query: 321 KIASDPMN--SANRRIDIL 337 ++ +D + NRR++I+ Sbjct: 162 RVPNDSAANMAQNRRVEII 180 >gi|307823763|ref|ZP_07653991.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] gi|307735057|gb|EFO05906.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] Length = 322 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 81/281 (28%), Gaps = 10/281 (3%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 + ++G+ + K + + + + LE Sbjct: 44 HESANAPKKTNEGLELKHTQSPAVDDGLQPPITQLQGEVTQNQAKGLTESAQNKGLELEP 103 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + Q + + K L +ST + + + S+ I + + Sbjct: 104 TQSPVDEGSQPPITQPQGEVTPDLAKGLTESTQNKGLELEPTQSPIDEGSQSAITQPQGE 163 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 S + + + +S++ F P Sbjct: 164 VTPDQAKGLTESAQPAGDSGFPTPAAEGKRSSQHEPVSLL-VLGGGFFSSGQITPRANIQ 222 Query: 250 VVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSG 303 + I ++ + + + GH D + N +SL RA + QVL K G Sbjct: 223 DAIDNIIPLIQTRPLDNVVVEGHADKWVPFGASPAQVSKLNENISLRRANAIAQVLKKKG 282 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 ++ DRI + G ++ + NRR++I + Q Sbjct: 283 IASDRII-VHGLGDTVPLASNLTYDGRMKNRRVEIKLLPAQ 322 >gi|300718501|ref|YP_003743304.1| OmpA family protein [Erwinia billingiae Eb661] gi|299064337|emb|CAX61457.1| OmpA family protein [Erwinia billingiae Eb661] Length = 500 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 11/153 (7%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + R + LAK + + + + GI+ + D MFD S+ + Sbjct: 78 QNREKALAKIAAEEHIVISSSPLQAQESGGKKDVGIVAQVEDN---GMFDTDSAQLSVDG 134 Query: 249 IVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + ++K+ V+ V+ I GHTDA+ A N +LS RA S +VL ++G++ Sbjct: 135 LRQVRKLAAVMKQDDQQGVVLIVGHTDAT---GNASWNQKLSESRAQSVGRVLQQAGLNP 191 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 R+ G R + + NRR++I+ Sbjct: 192 QRLY-FQGAGSSRPIADNATLAGRSANRRVEIV 223 >gi|152986859|ref|YP_001349884.1| peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa PA7] gi|150962017|gb|ABR84042.1| peptidoglycan associated lipoprotein OprL [Pseudomonas aeruginosa PA7] Length = 169 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L S + + + GHTD N L RA + Sbjct: 70 FEYDSSDLKPEAMRALDVHAKDLKGSGQRVVLEGHTDER---GTREYNMALGERRAKAVQ 126 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + NRR+++ Sbjct: 127 RYLVLQGVSPAQLELVS-YGKERPVATGHDEQSWAQNRRVEL 167 >gi|320325748|gb|EFW81809.1| ompA family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327336|gb|EFW83350.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330881603|gb|EGH15752.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 229 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A GV + I + + F SS L + L Sbjct: 87 DKQEAALRASMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L GV + + + G Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199 Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR+++ ++ G Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226 >gi|326403344|ref|YP_004283425.1| hypothetical protein ACMV_11960 [Acidiphilium multivorum AIU301] gi|325050205|dbj|BAJ80543.1| hypothetical protein ACMV_11960 [Acidiphilium multivorum AIU301] Length = 215 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 11/146 (7%) Query: 197 KKISSTLSGLVADNIVKGVLFETT-RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + L GV T + +++ F S+ P +L ++ Sbjct: 69 QHLEAQKQALQRTAQGTGVQVSQTADNRLKLNVPADAG---FATGSATLNPRLYPILDQL 125 Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 G+ L + E + I G+TD++ N+ LS +RA S L+ G+S RI G Sbjct: 126 GQGLQQNPTETVQIIGYTDST---GSNAINYPLSDNRAASVKTYLVSRGISGQRI-ATRG 181 Query: 315 FAHHRLKIASDPM--NSANRRIDILV 338 ++ +ANRR+DI V Sbjct: 182 MGPQDPVASNATAAGRAANRRVDIYV 207 >gi|58582662|ref|YP_201678.1| hypothetical protein XOO3039 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58427256|gb|AAW76293.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 438 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 12/158 (7%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-------RNTPMFDKSSSIP 244 L+ +A I + + + + E + + + MF S+ Sbjct: 278 LERVALPIPAAVRAATIPALAPLLAAEQRAGLLTVHTDGDGRSTVRLASASMFPSGSAEL 337 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSG 303 + +L+++ L + + GHTD P R+ +DN+ LS RA S VL +G Sbjct: 338 DADQTHLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAESVGAVL-AAG 396 Query: 304 VSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338 + + R + SG + P + NRR++IL+ Sbjct: 397 LRDRRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434 >gi|110639902|ref|YP_680112.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110282583|gb|ABG60769.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 505 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + +F+++S L ++ L ++ V+ +I + GHTD A+ N LS +R Sbjct: 398 HNVLFERTSYELLSSSLPALDQLVTVMNQYPGMIIELSGHTDNV---GSAKKNMELSKNR 454 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 SA + L+ G+S DRI + G+ ++D + NRR+++ + Sbjct: 455 VESAKKYLVSKGISADRIKSV-GYGSKYPVASNDGEQTRKYNRRVELRI 502 >gi|153007835|ref|YP_001369050.1| OmpA/MotB domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151559723|gb|ABS13221.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188] Length = 200 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 15/134 (11%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGH 271 + T I++S+ +FD S+ + L I ++L + + + G+ Sbjct: 71 GNITMRETEDSIVLSVTSD---VLFDFDSAKLTGKAKATLTDIAKILESMPDSAVRVVGY 127 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD------ 325 TD+ + N +LS RA + + L+ +GV R+ G ++ Sbjct: 128 TDS---KGADSYNDKLSKSRADAVTKFLVNNGVQSARLKP-EGRGESEPVAPNEIKGKDN 183 Query: 326 -PMNSANRRIDILV 338 + NRR++ ++ Sbjct: 184 PDGRAQNRRVEFVL 197 >gi|83646323|ref|YP_434758.1| outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] gi|83634366|gb|ABC30333.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] Length = 483 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 77/208 (37%), Gaps = 12/208 (5%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + K + + + + L D + ++ EK M +++R + I Sbjct: 279 DQPNKEVVRQVNANIQGLMVDRDSALLALENAKTREMRVASEKDELMAQQQREDQRKQAI 338 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 ++ + + + K + +LI F S E ++ KI E + Sbjct: 339 TAKFAVVQSLFTDKEADVYRQKDNVLIRAHGFN----FPSGKSEIQGENFALVNKIIEAV 394 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAH 317 + + GHTD N LS RA ++L + G + D+I+ + G+ Sbjct: 395 KEFPNAQVVVSGHTDNR---GSTELNQGLSQQRAEEVAKMLNEIGRIPSDKITAM-GYGE 450 Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQG 343 R +D M NRR+++L+ + G Sbjct: 451 QRPVSTNDTMEGRADNRRVEVLIVNEGG 478 >gi|319952094|ref|YP_004163361.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319420754|gb|ADV47863.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 370 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 8/133 (6%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 V + + +FD + + L + L + + + + GH Sbjct: 231 DMVSVTLIPSYTQNQLY-VIEELLFDFDETSIEIDYNQQLSDLVTYLKSNPKLNVYLYGH 289 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NS 329 TDA + N LS RA + L+KSG+S++RI GF + ++++ Sbjct: 290 TDAM---GSVKYNDDLSEKRAATVASFLVKSGLSKNRI-SWKGFGFKKPVVSNEKEDIRF 345 Query: 330 ANRRIDILVEDRQ 342 NRR++ LV + Q Sbjct: 346 KNRRVEFLVAEPQ 358 >gi|330951040|gb|EGH51300.1| OmpA/MotB [Pseudomonas syringae Cit 7] Length = 229 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV + I + + F SS L + L Sbjct: 87 DKQEAALRESMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L GV + + + G Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPD 199 Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR+++ ++ G Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226 >gi|316935074|ref|YP_004110056.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315602788|gb|ADU45323.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1] Length = 446 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 7/118 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 ++ + F++ S++ + +L K+ + I + G+TDA Sbjct: 333 RVTAVASAEKINFERRSAVIDKASQPLLGKLAAAIKQCPAVTIEVAGYTDA---AGKKST 389 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 N LS RA + L K+G+ ++ G+ + ++D + NRRI+ +V+ Sbjct: 390 NLALSKRRAEAVVASLTKAGIGSVKLVA-EGYGSAKPIASNDTAEGRAQNRRIEFVVK 446 >gi|322830754|ref|YP_004210781.1| OmpA/MotB domain protein [Rahnella sp. Y9602] gi|321165955|gb|ADW71654.1| OmpA/MotB domain protein [Rahnella sp. Y9602] Length = 220 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD +SS P L + Sbjct: 80 YMDVQEAKLRDKMKGTGVSVTRQGDNIVLNM---PNNVTFDTNSSTLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N +LS RA L+ GV R+ +G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GTRALNMKLSQQRADGVGSALITQGVEGSRVHT-TGAG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 + + NRR++I + Sbjct: 193 PDNPIAGNSTEAGKAQNRRVEITL 216 >gi|298481010|ref|ZP_06999205.1| lipoprotein PG3 [Bacteroides sp. D22] gi|298273033|gb|EFI14599.1| lipoprotein PG3 [Bacteroides sp. D22] Length = 255 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + + +F ++ L K Sbjct: 91 KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 149 Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + +SI G+TD ++N N LS +RA S L+ GVS ++I Sbjct: 150 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 209 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G ++D NRR+++ + + Sbjct: 210 KSVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 244 >gi|28871116|ref|NP_793735.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. tomato str. DC3000] gi|71736967|ref|YP_275906.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487003|ref|ZP_05641044.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289626503|ref|ZP_06459457.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650949|ref|ZP_06482292.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. aesculi str. 2250] gi|298488202|ref|ZP_07006238.1| peptidoglycan-associated outer membrane lipoprotein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|301384813|ref|ZP_07233231.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. tomato Max13] gi|302063533|ref|ZP_07255074.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. tomato K40] gi|302130603|ref|ZP_07256593.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28854366|gb|AAO57430.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. tomato str. DC3000] gi|71557520|gb|AAZ36731.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157260|gb|EFH98344.1| peptidoglycan-associated outer membrane lipoprotein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320323045|gb|EFW79134.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. glycinea str. B076] gi|320329683|gb|EFW85672.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] gi|330868619|gb|EGH03328.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330872646|gb|EGH06795.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330877972|gb|EGH12121.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] gi|330964831|gb|EGH65091.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. actinidiae str. M302091] gi|330988976|gb|EGH87079.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009355|gb|EGH89411.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331016446|gb|EGH96502.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 166 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 67 FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 123 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 124 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 164 >gi|115360943|ref|YP_778080.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD] gi|115286271|gb|ABI91746.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 239 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F S++ L K+ + + G+TDA+ A N LS R Sbjct: 133 GDAYFATDSAVLTSAATAALDKLLNQQGDRHFARVDVDGYTDAT---GSAAHNQALSKRR 189 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 A + L + G+ D +G ++D + NRR++I ++ Sbjct: 190 ADAVAAYLREHGLKADAF-AATGHGEANPAASNDTAEGRARNRRVEISLQK 239 >gi|163784521|ref|ZP_02179383.1| OmpA domain protein [Hydrogenivirga sp. 128-5-R1-1] gi|159880207|gb|EDP73849.1| OmpA domain protein [Hydrogenivirga sp. 128-5-R1-1] Length = 75 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 6/77 (7%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 I GHTD + + N LSL RA ++ + G S D + + G+ R + Sbjct: 2 IEGHTDNT---GSYKLNLDLSLKRALYIMKMFISCGFSPD-LLSVRGYGPSRPIADNSTP 57 Query: 327 -MNSANRRIDILVEDRQ 342 + NRR++ +++ ++ Sbjct: 58 KGRAKNRRVEFVIKTKE 74 >gi|172062592|ref|YP_001810243.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6] gi|171995109|gb|ACB66027.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 214 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 67/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + A++ +++ K + L+G +A R ++ I + Sbjct: 42 QLTSKLEEAVRARQQEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGAVL 91 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S P+ +L+ + LA E++ I G D R DNW LS Sbjct: 92 FALNSDQLQPDGRDLLKTLAGPLAAYLTTRDEILMISGFADDQQVRAGNRQFADNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +GV + + F + ++ D + NRR++I Sbjct: 152 KRALTVTRALIDAGVPARSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199 >gi|332527567|ref|ZP_08403614.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus JA2] gi|332111970|gb|EGJ11947.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus JA2] Length = 214 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 7/102 (6%) Query: 244 PLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 PE L + + I GHTDA+ N +LS+ RA + L+ Sbjct: 114 LKPEAKAKLDDLAAKAKAVNLEVVIAVGHTDAT---GPDGYNQKLSVKRADAVKAYLVDQ 170 Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G+ ++R+ G + + + NRR++I V + Sbjct: 171 GIEKNRVYT-EGKGEKQPVADNKTREGRAKNRRVEIEVVGTR 211 >gi|289668951|ref|ZP_06490026.1| OmpA family protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 200 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293 MF S+ + +L+++ L + + GHTD P R+ +DN+ LS RA Sbjct: 90 SMFPSGSAELDADQTRLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAQ 149 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338 S VL +G+ + R + SG + P + NRR++IL+ Sbjct: 150 SVGAVL-AAGLRDPRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 196 >gi|163786625|ref|ZP_02181073.1| putative flagellar motor protein MotB [Flavobacteriales bacterium ALC-1] gi|159878485|gb|EDP72541.1| putative flagellar motor protein MotB [Flavobacteriales bacterium ALC-1] Length = 283 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 88/254 (34%), Gaps = 17/254 (6%) Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 E I ++++ + K +++D Sbjct: 29 ENGEIKSELTKTRVEKEDLENKFAIIEKRVSDYNTKIQSLNEDVEGLAIENKAKFEVSKD 88 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + K N + ++ A K + + S N Sbjct: 89 GTVASGVSKEKMRATLQNVDP--------EKLAGAKTLKDSMNLAVQHNLSKAMNTEDLN 140 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269 + ++ + T ++ISI D +F+ +S + +L+K+ +V+ + + Sbjct: 141 EDEDIVVDINDTVVMISIADDM---LFNTASYRVSNKADKILKKLADVINSEPSLDVMVE 197 Query: 270 GHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP- 326 GHTD+ DNW LS+ RA S + L K V+ +++ SG + ++ + +D Sbjct: 198 GHTDSRSINTAKVSDNWELSVLRATSVVKKLQKQFKVAPEQLIA-SGRSSYQPLVENDSR 256 Query: 327 -MNSANRRIDILVE 339 + NRR I++ Sbjct: 257 DNRAKNRRTRIILM 270 >gi|46580633|ref|YP_011441.1| motB protein [Desulfovibrio vulgaris str. Hildenborough] gi|120602060|ref|YP_966460.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4] gi|46450052|gb|AAS96701.1| motB protein, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562289|gb|ABM28033.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4] gi|311234364|gb|ADP87218.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1] Length = 244 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 64/159 (40%), Gaps = 9/159 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +++ ++ + + + + + + I + + + +F + P Sbjct: 87 QRELIEAQRQTYNEMRTYFTVNGVEGVIGAVFDEGVITLRV---PSEVLFAPGAVELAPG 143 Query: 248 TIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLMKSGV 304 VL + + + + I+I+G TD AR DNW +S R+ + + + +G+ Sbjct: 144 ADRVLATLKDLFIRRREQNINIKGFTDDVQPSANARFKDNWEVSALRSVNVLRYFLGAGI 203 Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 R++ +G + D + NRR++ ++E R Sbjct: 204 EPARLTA-TGLGELDPLFPNTSDENRARNRRVEFVLERR 241 >gi|126461330|ref|YP_001042444.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126102994|gb|ABN75672.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 213 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ PE L++ + + E + GHTD N RL L RA + Sbjct: 69 FPFDSAALTPEAQATLRRQADWIRQFPEVRFRVYGHTD---LVGSEAYNKRLGLRRAKAV 125 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L G+S R+ + + R I NRR Sbjct: 126 VAYLASQGISPARLEALVSYGETRPVIPVAAPEERNRR 163 >gi|86130772|ref|ZP_01049371.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85818183|gb|EAQ39343.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 293 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 91/251 (36%), Gaps = 10/251 (3%) Query: 95 QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154 Q++ D + +I + + + + N + + + S E Sbjct: 33 QSEYDTTKVTLTKTKVEKEEIKAKYAAIEQRVDDYNNKINALKDTNTDLQASNDSKFEIT 92 Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 + ++ K + + P + ++ L K + + +N + Sbjct: 93 TNGTVMSENTKKKLRAALANVDPSELAQAQTLEDSMNLAVSHKLKRNLDRDVYGNNASQD 152 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTD 273 + + T + ISI D+ +F S E +L++I V+ + + GHTD Sbjct: 153 INIDIDDTVVQISISDKM---LFRSGSYRVSKEADDLLKRIAAVVNSEPAVEVMVEGHTD 209 Query: 274 ASPFRNIAR--DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN-- 328 + + + DNW LS+ RA + + L V ++ SG + + + ++ Sbjct: 210 SRTVKKGSYLKDNWDLSVQRATAIVRELQNNHNVDPAKLIA-SGRSSYVPLVENNSKENM 268 Query: 329 SANRRIDILVE 339 S NRR IL+ Sbjct: 269 SRNRRTRILIL 279 >gi|311696306|gb|ADP99179.1| OmpA/MotB domain protein [marine bacterium HP15] Length = 402 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +SS+ ++++ + + + E I I GH+D+ A N LS RA + Sbjct: 297 FPTNSSVIGNAYDEEIRRVADFMQENPETIVEIAGHSDSR---GDADYNQFLSQRRAEAV 353 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 L GV R+ + G+ + +++ +ANRR++ ++ R+ Sbjct: 354 AGRLTGPLGVDPARVEAV-GYGEEQPIASNNTADGRAANRRVEARIQVRR 402 >gi|323528476|ref|YP_004230628.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001] gi|323385478|gb|ADX57568.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001] Length = 217 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +K+++ K + L+G +A R ++ I + Sbjct: 46 ELSNKLEQEVKQRQLETQRRKTLEEALAGPLAAG----------RVTLVNGRIGISGNVL 95 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S P+ +L+ + L + +++ + G TD R DNW LS Sbjct: 96 FALNSDQLQPQGRDLLKSLAGPLSAYLRANDQLLMVSGFTDDQRLREGNRRFADNWELSA 155 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +GV + + F + ++ + + NRR++I Sbjct: 156 QRALTVTRALIDAGVPASSVFAAA-FGSAQPVSSNADEQGRARNRRVEI 203 >gi|262165460|ref|ZP_06033197.1| outer membrane protein [Vibrio mimicus VM223] gi|262025176|gb|EEY43844.1| outer membrane protein [Vibrio mimicus VM223] Length = 193 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 12/146 (8%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L + D+ V+ V + + + N F SS L+ + Sbjct: 54 DQQEAELRKALLDSGVQVVRVGENQLMLRME-----NGIGFTSSSYQLDSYIHKTLRGVA 108 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + + GHTD++ N LS RA S L+ GV+ R G Sbjct: 109 RILVAYPDTSLVIEGHTDST---GSDTTNQVLSEKRAESVRAFLLSQGVAAGRAIA-RGN 164 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 ++ NRR++I + Sbjct: 165 GERFPLCSNSTAEGRACNRRVEIQIL 190 >gi|311748659|ref|ZP_07722444.1| outer membrane protein, peptidoglycan-associated lipoprotein [Algoriphagus sp. PR1] gi|126577188|gb|EAZ81436.1| outer membrane protein, peptidoglycan-associated lipoprotein [Algoriphagus sp. PR1] Length = 643 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 8/139 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 L+ + + +++ +D + P+ V L K+ ++L + Sbjct: 504 EDLIQEVTNITLDTTIVLDQLILDKSIVLENIYYDLDKADIRPDAAVELDKLVQILKDNP 563 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + HTD + N LS RA SA ++ G+S DR+ G+ +L I Sbjct: 564 SIKIELSSHTDDR---SSDEYNQDLSQRRAQSAVDYIVSQGISADRLVA-KGYGESQLII 619 Query: 323 ASDPMNSA---NRRIDILV 338 + NRR + V Sbjct: 620 ENATTEEEHQTNRRTEFKV 638 >gi|110639097|ref|YP_679306.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110281778|gb|ABG59964.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 648 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270 V+ + T T I+ + T F+ + + E L ++G L E + I G Sbjct: 522 KDSVIHKVTDTIKTIAAAEIAKTVYFESNRADLNAEAKTELNQLGIYLDTHKEANVYISG 581 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MN 328 H DA A N LS RA +A L G+S RI + F + + Sbjct: 582 HADAL---GSAAINNALSQKRAQAAAVYLKAKGISAARIK-VESFGSEKPVETNATVEGR 637 Query: 329 SANRRIDILVE 339 + NRR+ I+V+ Sbjct: 638 AKNRRVQIVVK 648 >gi|149276390|ref|ZP_01882534.1| possible outer membrane protein [Pedobacter sp. BAL39] gi|149232910|gb|EDM38285.1| possible outer membrane protein [Pedobacter sp. BAL39] Length = 620 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 7/128 (5%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + E + + FD + LPE++ L + +L + + I+GHTD Sbjct: 496 VVEIYLQKLKVGTNMVLKNIFFDTNDFKLLPESVSELSTLLNLLKSNPNVQMEIQGHTDN 555 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 + N +LSL+RA + Y+ L+ + + R+ + G+ + +A+D NR Sbjct: 556 V---GNDQLNEQLSLNRAKAVYEYLLDNQIDPQRL-QYKGYGAKKPVVANDTEDNRRLNR 611 Query: 333 RIDILVED 340 R ++ Sbjct: 612 RTSFVITK 619 >gi|126739844|ref|ZP_01755535.1| hypothetical protein RSK20926_14189 [Roseobacter sp. SK209-2-6] gi|126719076|gb|EBA15787.1| hypothetical protein RSK20926_14189 [Roseobacter sp. SK209-2-6] Length = 791 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 72/220 (32%), Gaps = 16/220 (7%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + G+DL + S + K + Sbjct: 573 DDYEARDAAQRVQLQNLGQDLNAALARAASEERRRRLLEEKERKRLEAEAAALASKAEEL 632 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQK 254 + + L ++ + + G+ I + +F S+ + K Sbjct: 633 ENKAQDLERYRSEFFGRLRDVLGKQEGVRIEGDRFVFASEVLFPPGSADLSAAGQAEIGK 692 Query: 255 IGEVLA--------HSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMKS-G 303 + ++L +I + GHTD + DNW LS RA S + ++++ G Sbjct: 693 VAQILQSVVVEIPAEINWIIRVDGHTDNTTMLGHPKYSDNWELSQGRALSVVRYMIENLG 752 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + R+ +GF + ++D + NRRI++ +R Sbjct: 753 IPPGRL-AANGFGEFQPVNSADTPEARAQNRRIELKFTER 791 >gi|330829325|ref|YP_004392277.1| OmpA family protein [Aeromonas veronii B565] gi|328804461|gb|AEB49660.1| OmpA family protein [Aeromonas veronii B565] Length = 162 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 7/114 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288 D N +F + P+T ++K+G+ L + + GHTD + + N +LS Sbjct: 52 DLANRVLFANNVGALNPQTRQSVEKLGKTLLGVGLDKARVDGHTDNT---GESSYNQQLS 108 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L RA S VL+ G+ + +I G + +ANRR+ I++ D Sbjct: 109 LKRAQSVADVLVSVGMKPANL-EIHGRGETMPLADNKTREGRAANRRVAIVISD 161 >gi|90577944|ref|ZP_01233755.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14] gi|90441030|gb|EAS66210.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14] Length = 352 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ E L+ I + L + + + GHTD+ N +LS +RA + Sbjct: 236 FAFDSNTLTAEDQARLEPIAQRLVNFPNSELVVIGHTDSR---GSEAYNQKLSEERAKTV 292 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 LMK + R+ G ++D + NRR+D+ Sbjct: 293 AVYLMKHFNIDASRVK-GEGRGELDPVASNDTAEGRAQNRRVDVT 336 >gi|330975320|gb|EGH75386.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 167 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 68 FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 124 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 125 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 165 >gi|171911103|ref|ZP_02926573.1| outer membrane protein [Verrucomicrobium spinosum DSM 4136] Length = 479 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 14/162 (8%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLP 246 ++L + I LS L+ADN + T ++ + + + F+ ++ P Sbjct: 321 EMEKLASGWRIIGLNLSRLLADNARSSAMVGIPYTPLVQNPKGGESIALYFEYDQAVLHP 380 Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 L + +L S I GHTDA + + N LS RA + Q + GV Sbjct: 381 RAQAQLNIVASILKASPSKNLKIGGHTDA---KGSDQYNVALSQRRAAAVKQYFLDQGVP 437 Query: 306 EDRISKISGFAHHRLKIASD--------PMNSANRRIDILVE 339 ++ + GF + S NRR +IL++ Sbjct: 438 PLQVETV-GFGKALPLSPNANPDGSDNPEGRSRNRRAEILLD 478 >gi|299069126|emb|CBJ40378.1| putative outer membrane protein; OmpA/MotB domain [Ralstonia solanacearum CMR15] Length = 279 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 73/246 (29%), Gaps = 12/246 (4%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 D + + + G + + + + + Sbjct: 36 PGDPAPVSAASPVPGQVVAGGMVPDEATKANVLARLRELYGSANVVDQIEVGNVVSPPNW 95 Query: 157 LC---KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 K + + ++ + + Q LA +++TL Sbjct: 96 TGNVQKILSPQIKQVSRGQLNIDGTQVAVHGDVQNEAQRQQLASDMATTLGASYTIKNGL 155 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272 V + ++ + ++ ++ F+ S+ P+ +L ++ VL I GHT Sbjct: 156 RVAAVSEQSLLDQTLANRIIE--FETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHT 213 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA 330 D N LS RA + L+ G ++ I G + + D S Sbjct: 214 DN---SGSRAMNLNLSQARAETVKSYLISKGAEPGTLTAI-GVGPDQPVAPNATDEGRSR 269 Query: 331 NRRIDI 336 NRRI+ Sbjct: 270 NRRIEF 275 >gi|146275632|ref|YP_001165792.1| OmpA/MotB domain-containing protein [Novosphingobium aromaticivorans DSM 12444] gi|145322323|gb|ABP64266.1| OmpA/MotB domain protein [Novosphingobium aromaticivorans DSM 12444] Length = 291 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 74/268 (27%), Gaps = 9/268 (3%) Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 G Q P ++ T + +I + +++ +++ Sbjct: 23 GSVIAQQDPANDPNIIVNGEAIPDTTAMTAGPEIKGIITARSGDKMKVTTAEGASTVVFI 82 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK--KI 199 + + K +N + +LA + + DL I Sbjct: 83 NEATEIKGSGGLFGSSRKKLTAAALLNGLPVTVKTMQAGPALLASQISLKSNDLKTATMI 142 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + A+ I I FD P+ L Sbjct: 143 RNGTAQGFAEQTAATEALRGRMGDIDKYNIKSTTNVYFDTGKYNLSPQAKAELCNAATTA 202 Query: 260 AHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317 + + G+TD+ N LS RA S L ++ R+ +G A Sbjct: 203 EGIDNALMLVVGYTDSV---GDDEYNQTLSEKRANSVINYLQQACRWKPYRMLTPTGMAK 259 Query: 318 HRLKIASDPMN--SANRRIDILVEDRQG 343 ++D + NRR+ + V +G Sbjct: 260 ADPLASNDTEEGKAQNRRVAVNVLVSKG 287 >gi|254461268|ref|ZP_05074684.1| flagellar motor protein [Rhodobacterales bacterium HTCC2083] gi|206677857|gb|EDZ42344.1| flagellar motor protein [Rhodobacteraceae bacterium HTCC2083] Length = 760 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 88/265 (33%), Gaps = 19/265 (7%) Query: 95 QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154 + +I ++ + + T+Q + N +Q S + Sbjct: 497 DDATQQAILLAAARDELVQEQERTSQAQLQTEALNQQVAALRAQLSSLQAILDEAKIQDD 556 Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST---LSGLVADNI 211 + +L +N K + L +KRL+ A + L ++ Sbjct: 557 ASQVQLQNLGSELNAALARVAADERKRRELEEAERKRLEVEALALQEQTKDLERYRSEFF 616 Query: 212 VKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQKIGEVL--------AH 261 + + G+ I + +F + PE + K+ +L Sbjct: 617 GRLRDVLGRQDGVRIEGDRFVFSSEVLFPPGRAALSPEGRGEVAKVASILLAVADDIPDG 676 Query: 262 STEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 +I + GHTD P DNW LS RA S + ++ G+ R+ +GF Sbjct: 677 IDWIIRVDGHTDNVPLSGLGEFADNWELSQARALSVVKYMVNFLGIQPTRL-AANGFGQF 735 Query: 319 RLKI--ASDPMNSANRRIDILVEDR 341 + SD + NRRI++ ++ Sbjct: 736 QPVNLEDSDEARAQNRRIELKFTEK 760 >gi|312195438|ref|YP_004015499.1| OmpA/MotB domain protein [Frankia sp. EuI1c] gi|311226774|gb|ADP79629.1| OmpA/MotB domain protein [Frankia sp. EuI1c] Length = 440 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 76/287 (26%), Gaps = 21/287 (7%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + F + + S + + T+ + Sbjct: 22 LALQFEFANQGTESISPADLGTDPLTHVIAFLVDLPRGTGYATQRTPQANPDIDGSGPDE 81 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 R + Q+E + + D + K+ + Sbjct: 82 ARASATTEKDVAAGQTETVTLVFPAPPAEATSMLVLVDGFVPVEVPIQAQGSAALKDDPV 141 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 +L ++ + D + R + +F SS Sbjct: 142 LHVPSSPPNELDPPVAPLVCATETDPAAATPAQTSFRL---------PSDVLFAFGSSTL 192 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P + + + ++ ++I G+TD+ DN LSL RA + Q + + + Sbjct: 193 SPSAARAIDALAHQITATSGTVTIAGYTDSI---GTDADNQALSLARASAVRQA-IAATL 248 Query: 305 SEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVEDRQG 343 D K GF + + NRR+++ V+ G Sbjct: 249 GPDFTYKAVGFGETSPVAPNTHQDGSDNPDGRARNRRVELTVDAATG 295 >gi|78047693|ref|YP_363868.1| OmpA family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036123|emb|CAJ23814.1| OmpA family membrane protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 438 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293 MF S+ + +L+++ L + + GHTD P R+ +DN+ LS RA Sbjct: 328 SMFPSGSAELDADQTRLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAQ 387 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338 S VL +G+ + R + SG + P + NRR++IL+ Sbjct: 388 SVGAVL-AAGLRDPRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434 >gi|327398898|ref|YP_004339767.1| OmpA/MotB domain-containing protein [Hippea maritima DSM 10411] gi|327181527|gb|AEA33708.1| OmpA/MotB domain protein [Hippea maritima DSM 10411] Length = 310 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 66/180 (36%), Gaps = 8/180 (4%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + + + P S+ ++ + R + I + +VK + +T + Sbjct: 133 SEQNKDHFYISAQSPDKSEYIMVYVGEGYRGRPGKAAIGIVKLKQIETGLVKIINAKTMK 192 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI 280 I FD + + P + +++I +L + + + GHTD+ Sbjct: 193 KEIETKGHVPIYGIYFDFNKATIKPSSEPTIKEIARLLKENPSLKLYVVGHTDSI---GD 249 Query: 281 ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 N +LS RA + L+K ++ +R+ G ++ NRR++++ Sbjct: 250 LNYNMKLSKKRAKAVVDELVKKYNINPNRLKAF-GVGPLAPVASNKTEEGRSKNRRVELI 308 >gi|319953135|ref|YP_004164402.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319421795|gb|ADV48904.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 683 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 91/274 (33%), Gaps = 19/274 (6%) Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSV---DLKIGSTNQKKQYQRLENNIFYLSNS 137 G + +N + + NK D S + G Y + ++N+ Sbjct: 410 DGFQEVKNVGKPVNSNKDDFSYIVSEKSQKGYFASNRAGGKGDDDIYSFERLTVEEVNNT 469 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + +T D + + + + E+ E + K+ + + Sbjct: 470 AIAGVVTELVTGDVMPKALVVLLDENNIKLKEIESADDGSFVFEDLEGDKKYTIKTNRKE 529 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIID-----QRNTPMFDKSSSIPLPETIVVL 252 + N + V + LI + D + + F+ S + L Sbjct: 530 YFEELKEVMTTLNDTEIVEVSLKKLKELIVVEDGIRKLKTDMIYFNFDKSFIREDASKEL 589 Query: 253 QKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 K+ EV++ E+ I I HTD+ + N LS RA S+ ++ G+ DRI Sbjct: 590 NKLVEVMSEYPEMVIKIESHTDSR---GASDYNRYLSDKRAKSSRDYIISQGIDADRIES 646 Query: 312 ISGFAHHRLKIASD-------PMNSANRRIDILV 338 G+ RL D + NRR + ++ Sbjct: 647 AIGYGEDRLLNDCDGSVKCTREKHELNRRSEFII 680 >gi|149913423|ref|ZP_01901956.1| OmpA domain protein [Roseobacter sp. AzwK-3b] gi|149812543|gb|EDM72372.1| OmpA domain protein [Roseobacter sp. AzwK-3b] Length = 638 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ SS ++ I E+L ++ I GHTD+ N RLS +RA + Sbjct: 499 FEPGSSTIDGNGAAIMDDIAEILRECGDIRIEIGGHTDSQ---GREEMNERLSQERAQAV 555 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L V + G+ + +D NRRI+ + Q Sbjct: 556 LNELRARRVLTSSFTA-KGYGESQPIADNDTEEGREANRRIEFRLLRPQ 603 >gi|326796261|ref|YP_004314081.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] gi|326547025|gb|ADZ92245.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] Length = 213 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 8/156 (5%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +RL+D K D +K ++ + + F+ P+ Sbjct: 34 ERLKDQDKDGVIDARDTCPDTPLKSLIDNNGCPSHTVKTLSSELDVHFETGKYNLKPKYY 93 Query: 250 VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSED 307 L ++G+ L + I I GHTD N LS RA S + L + + + Sbjct: 94 PGLVELGKFLQKNPNTIAIITGHTDDI---GDEESNEILSQRRAQSIAKALSEKFKIDIE 150 Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RI + G+ R ++ NRR+ V + Sbjct: 151 RIVAL-GYGESRPMYPNETDVERRKNRRVQASVVSK 185 >gi|308449675|ref|XP_003088039.1| hypothetical protein CRE_17774 [Caenorhabditis remanei] gi|308250191|gb|EFO94143.1| hypothetical protein CRE_17774 [Caenorhabditis remanei] Length = 216 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 52/144 (36%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV G + I+ + FD + S P L K+ + Sbjct: 76 YLDNKEKKLRQQMQGTGVEVNRNPDGSVALIM--PGSITFDTNKSTIKPNFYGTLNKVAQ 133 Query: 258 VL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + VI + G+TD + N LS +RAYS L GV RI G+ Sbjct: 134 TLMEDNKSVILVTGYTDNT---GNDSINIPLSQNRAYSVANYLKGKGV-ASRIDT-QGYG 188 Query: 317 HHRLKIASDPMNSA--NRRIDILV 338 + NRR++I + Sbjct: 189 SQNPIADNSTAAGREQNRRVEISI 212 >gi|149925997|ref|ZP_01914260.1| hypothetical protein LMED105_03075 [Limnobacter sp. MED105] gi|149825285|gb|EDM84496.1| hypothetical protein LMED105_03075 [Limnobacter sp. MED105] Length = 454 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 75/245 (30%), Gaps = 19/245 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + T S+ + +R+ +L S S Sbjct: 226 QPNSTNTPTSLHPDFWQSKAPGNNRRMRQIPLWLPISALSTLGALFFIGLYFNLNTQSDH 285 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 E + + E + + + L ++I + L L V+ Sbjct: 286 AFAEIVSIQFPSPQFAQTQSEPVPVTQGPELPIQLREEIVAGLLTLKQIGNKSTVILT-- 343 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN- 279 +F+ S+ I +++K+ LA I++ G+TD P R+ Sbjct: 344 ------------GDGLFNSGSAELNDSAIPLVEKVARKLALHPGQITVTGYTDNQPIRSI 391 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 NW+LS +RA Q + + G +D + NRR++I+ Sbjct: 392 RFPSNWQLSAERAEHVGQRIAT--FLPNTAIATEGAGAANPIAPNDSAQGRARNRRVEIM 449 Query: 338 VEDRQ 342 + Q Sbjct: 450 LTHNQ 454 >gi|66044664|ref|YP_234505.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] gi|289674679|ref|ZP_06495569.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. syringae FF5] gi|302187150|ref|ZP_07263823.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. syringae 642] gi|63255371|gb|AAY36467.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] gi|330896136|gb|EGH28357.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. japonica str. M301072PT] gi|330936710|gb|EGH40898.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. pisi str. 1704B] gi|330959272|gb|EGH59532.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. maculicola str. ES4326] gi|330968884|gb|EGH68950.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 167 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 68 FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 124 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 125 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 165 >gi|317153134|ref|YP_004121182.1| peptidoglycan-associated lipoprotein [Desulfovibrio aespoeensis Aspo-2] gi|316943385|gb|ADU62436.1| peptidoglycan-associated lipoprotein [Desulfovibrio aespoeensis Aspo-2] Length = 183 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S E +L ++ T+ + + GH D N L RA +A Sbjct: 82 FAFDSYELNSEARSILALKANIMRRYTDVRVVVEGHCDER---GTEEYNLALGERRARAA 138 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 Y+ L+ GV R+S +S F + + ++ + NRR + +V Sbjct: 139 YEHLVILGVDPGRMSIVS-FGEEKPLDSAHNETAWAKNRRAEFVVR 183 >gi|78061292|ref|YP_371200.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383] gi|77969177|gb|ABB10556.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 220 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F + P L ++ A T +S+ G TD+ N LS R Sbjct: 114 GDALFATDHATLAPTARESLDRLLSERADHTYSQVSVTGFTDSV---GSDDYNLALSKRR 170 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 A S L G+ D + ++G ++ NRR++I ++ Sbjct: 171 AESVATYLKAHGLKTDSL-TVTGRGKADPVASNATPEGRASNRRVEIRLQ 219 >gi|115359322|ref|YP_776460.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD] gi|115284610|gb|ABI90126.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 224 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F + P L K+ T +++ GHTD+ N LS R Sbjct: 118 GDALFATGLATLTPAARASLDKLLSEREDRTYTQVTVTGHTDSV---GNDAANLALSKRR 174 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 A + L G++ + +SG ++ NRR+DI ++ Sbjct: 175 AETVAGYLKAHGLNA-QTVSVSGRGSADPVASNATAEGRASNRRVDISLQR 224 >gi|330831642|ref|YP_004394594.1| outer membrane lipoprotein [Aeromonas veronii B565] gi|328806778|gb|AEB51977.1| Outer membrane lipoprotein [Aeromonas veronii B565] Length = 218 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV +++++ N FD SSS L + Sbjct: 78 YMDVQEAKLREKLQGTGVSVTRNGNELILNM---PNNVTFDSSSSQLKAAGANTLSGVAM 134 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V+A +++ GHTD++ N +LS DRA + L+ GV+ RIS +G Sbjct: 135 VVAEFDKTRLNVVGHTDST---GSRDLNMKLSRDRADAVAAQLIGQGVAGSRIST-TGVG 190 Query: 317 HHRLKIASDPMN--SANRRIDILVE 339 + + + NRR+ I + Sbjct: 191 PDQPVATNSTAAGKAQNRRVTITLT 215 >gi|46578465|ref|YP_009273.1| chemotaxis protein MotB [Desulfovibrio vulgaris str. Hildenborough] gi|120603951|ref|YP_968351.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4] gi|46447876|gb|AAS94532.1| chemotaxis protein MotB [Desulfovibrio vulgaris str. Hildenborough] gi|120564180|gb|ABM29924.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4] gi|311232393|gb|ADP85247.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1] Length = 246 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 74/187 (39%), Gaps = 9/187 (4%) Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 + ++ + + L L + ++ L G+ A + + Sbjct: 58 RQPGDLAGTPEAPRTDVSKRLRDLLMDAEALSANAVEIRSLLFPPQVLPPGVEARTVERD 117 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274 V G++I++ +F + P ++ +L + +VLA +++ HTDA Sbjct: 118 VEVLENPEGVVIALTHDL---LFPQGQDRLPPASLRLLDTLTDVLAGLDADVNVSAHTDA 174 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANR 332 + D W LS RA S + ++ G+ R +SG+ R AS + NR Sbjct: 175 TEGG---ADPWDLSDRRALSVLEHFLQRGMDPARF-SVSGYGPDRPLDASASPEAAQRNR 230 Query: 333 RIDILVE 339 R++ILV+ Sbjct: 231 RVEILVK 237 Score = 41.9 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 27/70 (38%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 +K W + Y+D +T+L+AFF+++ +++ D + + G Sbjct: 6 RKTRRKPHQHIPQQGWMLTYSDLVTLLLAFFVLLVSMSSVDRVQFERMASSLRQPGDLAG 65 Query: 78 TASKGIFDEQ 87 T D Sbjct: 66 TPEAPRTDVS 75 >gi|209516113|ref|ZP_03264972.1| OmpA/MotB domain protein [Burkholderia sp. H160] gi|209503397|gb|EEA03394.1| OmpA/MotB domain protein [Burkholderia sp. H160] Length = 228 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 9/152 (5%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 L + ++ QD K++S+ L L + + G+ I I + Sbjct: 64 QTLETKTVQQSAPAPAGGAQQDARKQLSALLDALREKGL---ITVTDVPHGVEIGINAK- 119 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 +F+ + LP++ VL +I +VL ST + + GHTD+ P NW LS Sbjct: 120 --ILFNAGDARLLPDSFEVLNQIAQVLQKDSTGNVLVEGHTDSVPISTAKYASNWELSSA 177 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 RA + + L++ G+ R++ I G A + + Sbjct: 178 RAGAVVRYLVERGIEPHRLAAI-GRADNFPLV 208 Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 21/57 (36%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88 W I YAD +T +M FL ++++ + Q + +Q+ Sbjct: 29 RWLISYADLITTMMVLFLALYVLQLAKSKQLELRYQTLETKTVQQSAPAPAGGAQQD 85 >gi|77462452|ref|YP_351956.1| OmpA/MotB family outer membrane protein [Rhodobacter sphaeroides 2.4.1] gi|221638315|ref|YP_002524577.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131] gi|332560336|ref|ZP_08414658.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N] gi|77386870|gb|ABA78055.1| outer membrane protein, OmpA/MotB family [Rhodobacter sphaeroides 2.4.1] gi|221159096|gb|ACM00076.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131] gi|332278048|gb|EGJ23363.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N] Length = 213 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ PE L++ + + E + GHTD N RL L RA + Sbjct: 69 FPFDSAALTPEAQATLRRQADWIRQFPEVRFRVYGHTD---LVGSEAYNKRLGLRRAKAV 125 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L G+S R+ + + R I NRR Sbjct: 126 VAYLASQGISPARLEALVSYGETRPVIPVAAPEERNRR 163 >gi|127511566|ref|YP_001092763.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4] gi|126636861|gb|ABO22504.1| OmpA/MotB domain protein [Shewanella loihica PV-4] Length = 481 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 8/145 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + + E + I + +F S LPE V+ + L Sbjct: 339 KVVEETKLVDDRVVIDLEGLKDKIAQQGHVALDGLLFKFDSDQMLPEADEVITTLATYLK 398 Query: 261 HST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHH 318 + + GHTD + N LS RA + L G+++ ++ G + Sbjct: 399 SHPKQHFYVVGHTDDQGKQG---YNKGLSEQRAKAVVATLTQSHGINKAQL-SPMGVGEY 454 Query: 319 RLKIAS--DPMNSANRRIDILVEDR 341 + + NRR+++++ Sbjct: 455 VPVANNLDEAGRQRNRRVELVLRSD 479 >gi|330448104|ref|ZP_08311752.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492295|dbj|GAA06249.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 352 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S E L+ I + L + + + GHTD+ N +LS +RA + Sbjct: 238 FAFDSDKLTAEDEARLEPIAQRLVNFPNAELVVIGHTDSR---GSEAYNQKLSEERAKTV 294 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 LMK + R+ G ++D + NRR+D+ Sbjct: 295 ALYLMKHFNIDASRVK-GEGRGELDPVASNDTAEGRAQNRRVDVT 338 >gi|327481279|gb|AEA84589.1| ompA family protein [Pseudomonas stutzeri DSM 4166] Length = 265 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 31/253 (12%), Positives = 82/253 (32%), Gaps = 21/253 (8%) Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163 + + ++ + + + + + + + + Sbjct: 15 AGCSSQDTEHELAQASAALERIQADGMVQRGAPKDLQRALETLQRAERFNDYWGGAEDAR 74 Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA----------DNIVK 213 + + E + ++ RL+ ++ L ++ + Sbjct: 75 HYAYLSRRYSEIAAQQGELLQHQEQVARLEMERDRLRRMLQDAQLMTAEQQGRWLEDQMM 134 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272 + T G+++++ D +F S+ L K+ L + + I G++ Sbjct: 135 SLAASETDRGLVMTLGD----VLFHPDSAELGNSANRTLLKLVHFLQLNPQRKVRIEGYS 190 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330 D+ + N LS RA + +L+ G+ +R+ ++ G+ + + Sbjct: 191 DSR---GDPQANLELSRARAQTVADLLISLGIEAERV-EVRGYGERFPIAENASARGRAQ 246 Query: 331 NRRIDILVEDRQG 343 NRR++IL D G Sbjct: 247 NRRVEILFSDAAG 259 >gi|262407869|ref|ZP_06084417.1| outer membrane protein [Bacteroides sp. 2_1_22] gi|294646781|ref|ZP_06724404.1| OmpA family protein [Bacteroides ovatus SD CC 2a] gi|262354677|gb|EEZ03769.1| outer membrane protein [Bacteroides sp. 2_1_22] gi|292637941|gb|EFF56336.1| OmpA family protein [Bacteroides ovatus SD CC 2a] Length = 255 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + + +F ++ L K Sbjct: 91 KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 149 Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + +SI G+TD ++N N LS +RA S L+ GVS ++I Sbjct: 150 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 209 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G ++D NRR+++ + + Sbjct: 210 KSVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 244 >gi|326404482|ref|YP_004284564.1| hypothetical protein ACMV_23350 [Acidiphilium multivorum AIU301] gi|325051344|dbj|BAJ81682.1| hypothetical protein ACMV_23350 [Acidiphilium multivorum AIU301] Length = 456 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 7/149 (4%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L + V T +I I NT +F S+ + ++ KIG Sbjct: 310 NVLDRLRGFLQPEITKGEVAVLGTVNAPVIRIN---NTGLFASGSATVESTALPLISKIG 366 Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + LA + + G+TD+ P +N LS DRA +A VL ++ + RI+ G Sbjct: 367 QALAREKGKVQVIGYTDSQPIHTLRFPNNLVLSEDRAKAAAAVLDRAIGDQSRITA-EGR 425 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQ 342 + + NRRI+I++ + Sbjct: 426 GAADPIATNATPQGRALNRRIEIVLIRSE 454 >gi|322509420|gb|ADX04874.1| Outer membrane protein [Acinetobacter baumannii 1656-2] gi|323519441|gb|ADX93822.1| putative lipoprotein precursor [Acinetobacter baumannii TCDC-AB0715] Length = 154 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 +FD + + L ++ L + I GHTD N +LS + Sbjct: 47 PERLLFDFNDATLKQSHEAELTRLANQLNKYDLNKLKIVGHTDDV---GNPEYNQKLSEE 103 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA S + + G ++ I + G + + + + NRR+ I++ Sbjct: 104 RAQSVANLFLTHGFKKENIY-VIGRGSTQPYVPNTTNENRAINRRVAIVI 152 >gi|194434867|ref|ZP_03067114.1| OmpA domain protein [Shigella dysenteriae 1012] gi|194416886|gb|EDX33008.1| OmpA domain protein [Shigella dysenteriae 1012] gi|332089116|gb|EGI94226.1| ompA family protein [Shigella dysenteriae 155-74] Length = 550 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 51/152 (33%), Gaps = 11/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + + + V + + + +FD + + VL Sbjct: 399 EHIRQPVLRAIHDWRPPEQKMEVTASLQAQTVRL-----DSMSLFDVGQARLKDGSTKVL 453 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + + G+TDA+ + N +LSL RA + ++++ Sbjct: 454 VDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFA 510 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + G + +D + NRR+ I + R Sbjct: 511 VQGLGESQPAATNDTPQGRAVNRRVKISLVPR 542 >gi|169794682|ref|YP_001712475.1| putative lipoprotein precursor [Acinetobacter baumannii AYE] gi|213157946|ref|YP_002320744.1| OmpA/MotB [Acinetobacter baumannii AB0057] gi|215482270|ref|YP_002324452.1| Outer membrane protein A precursor [Acinetobacter baumannii AB307-0294] gi|239504137|ref|ZP_04663447.1| Outer membrane protein A precursor [Acinetobacter baumannii AB900] gi|260554079|ref|ZP_05826342.1| outer membrane protein A [Acinetobacter sp. RUH2624] gi|260558111|ref|ZP_05830321.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC 19606] gi|301345841|ref|ZP_07226582.1| Outer membrane protein A precursor [Acinetobacter baumannii AB056] gi|301512157|ref|ZP_07237394.1| Outer membrane protein A precursor [Acinetobacter baumannii AB058] gi|301597153|ref|ZP_07242161.1| Outer membrane protein A precursor [Acinetobacter baumannii AB059] gi|332851565|ref|ZP_08433542.1| OmpA family protein [Acinetobacter baumannii 6013150] gi|332867764|ref|ZP_08437836.1| OmpA family protein [Acinetobacter baumannii 6013113] gi|332873499|ref|ZP_08441450.1| OmpA family protein [Acinetobacter baumannii 6014059] gi|169147609|emb|CAM85470.1| putative lipoprotein precursor [Acinetobacter baumannii AYE] gi|193078408|gb|ABO13390.2| putative lipoprotein precursor [Acinetobacter baumannii ATCC 17978] gi|213057106|gb|ACJ42008.1| OmpA/MotB [Acinetobacter baumannii AB0057] gi|213987976|gb|ACJ58275.1| Outer membrane protein A precursor [Acinetobacter baumannii AB307-0294] gi|260404818|gb|EEW98325.1| outer membrane protein A [Acinetobacter sp. RUH2624] gi|260408384|gb|EEX01692.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC 19606] gi|332729910|gb|EGJ61242.1| OmpA family protein [Acinetobacter baumannii 6013150] gi|332733770|gb|EGJ64922.1| OmpA family protein [Acinetobacter baumannii 6013113] gi|332738324|gb|EGJ69200.1| OmpA family protein [Acinetobacter baumannii 6014059] Length = 159 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 +FD + + L ++ L + I GHTD N +LS + Sbjct: 52 PERLLFDFNDATLKQSHEAELTRLANQLNKYDLNKLKIVGHTDDV---GNPEYNQKLSEE 108 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA S + + G ++ I + G + + + + NRR+ I++ Sbjct: 109 RAQSVANLFLTHGFKKENIY-VIGRGSTQPYVPNTTNENRAINRRVAIVI 157 >gi|126643008|ref|YP_001085992.1| putative lipoprotein precursor [Acinetobacter baumannii ATCC 17978] gi|184159508|ref|YP_001847847.1| outer membrane protein [Acinetobacter baumannii ACICU] gi|183211102|gb|ACC58500.1| Outer membrane protein [Acinetobacter baumannii ACICU] Length = 126 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 +FD + + L ++ L + I GHTD N +LS + Sbjct: 19 PERLLFDFNDATLKQSHEAELTRLANQLNKYDLNKLKIVGHTDDV---GNPEYNQKLSEE 75 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA S + + G ++ I + G + + + + NRR+ I++ Sbjct: 76 RAQSVANLFLTHGFKKENIY-VIGRGSTQPYVPNTTNENRAINRRVAIVI 124 >gi|153006367|ref|YP_001380692.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152029940|gb|ABS27708.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5] Length = 307 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 73/216 (33%), Gaps = 12/216 (5%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + + + E L + ++++ Sbjct: 55 ARGEAASATRGLHEARAALDDARTQRADLATRLGQAEVERRDLLAVKDELSQDVQQKEQE 114 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + L + + A+ V + I + ++D+ +FD S + V Sbjct: 115 IAALRGEFDELQEKMKAEIEKGNVRLSQEKGRIKVDMVDE---ILFDVGDSSISAQGAEV 171 Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFR----NIARDNWRLSLDRAYSAYQVLMKS-GVS 305 L ++G VLA ++ I + GHTD P NW LS RA + + L + GV Sbjct: 172 LSRVGAVLARMSDKHIQVSGHTDDLPISKRLVERFPTNWELSAARAITVVRFLEERAGVP 231 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 R+ + + + + NRRI+IL+ Sbjct: 232 GRRLVGAA-HSQYDPISTGKTAKERARNRRIEILLT 266 >gi|256422968|ref|YP_003123621.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] gi|256037876|gb|ACU61420.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] Length = 499 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 7/106 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F +SS L + + + + + + GHTD + N LS+ RA + Sbjct: 393 LFKFNSSELNKNLYSSLDSLIKRIPRDGSIQLQVNGHTDN---AGTSAYNNSLSMKRANA 449 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 + + G+ D I I+G + + NRR++I++ Sbjct: 450 VAGYMQEHGLGND-IRLITGVGESQPVADNQSAAGRRRNRRVEIII 494 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 36/105 (34%), Gaps = 6/105 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +F + + + + I + G+ + N +S D+A + Sbjct: 265 LFTVDKNSLNDRYKQQIDEALNRYKGNRARIQLIGYA---WQKASEEYNRIISADKAKAV 321 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILV 338 L+ G S D ++ G + + + N R+++++ Sbjct: 322 ANYLVYNEGYSFDDF-EVQGAGKTKPRYDTAGNTAGENNRVEMII 365 >gi|187923217|ref|YP_001894859.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] gi|187714411|gb|ACD15635.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 168 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 6/111 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 T +FD + S + V+ + +L S + I + G+TD N LS R Sbjct: 52 PETALFDFNKSEVRSDAAAVIDRSAVLLKRSKKPIVVEGYTDNV---GTLEYNQHLSEAR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 A +A L+ G++ DRI + G A++ ++D + NRR +I+V Sbjct: 109 ASAAGYALVARGIAMDRI-RTKGNAYNNPVASNDTPEGRALNRRTEIVVRG 158 >gi|84391232|ref|ZP_00991563.1| outer membrane protein [Vibrio splendidus 12B01] gi|84376521|gb|EAP93399.1| outer membrane protein [Vibrio splendidus 12B01] Length = 222 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 61/208 (29%), Gaps = 9/208 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +Q+ +S L + + + + I A Sbjct: 18 QATQRQNATTGESETNSATQGALIGAIAGAVAGAATGDDSKDRRKRALIGAAGGAAVGGG 77 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + L + + GV E L ++ N F S L+ Sbjct: 78 IGYYFDQQEAALREELMNSGVQVERVGENQL--LLRLENGIGFGSGSYALESSIHNTLRG 135 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + + GHTD++ N LS RA S L+ V+ R Sbjct: 136 VARILVEYPDTSLVIDGHTDST---GSESSNQILSERRAESVRAFLISQDVAAGRAIA-R 191 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVE 339 G ++ + NRR++I + Sbjct: 192 GNGERYPLCDNNTSQGRACNRRVEIQIL 219 >gi|326797243|ref|YP_004315063.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] gi|326548007|gb|ADZ93227.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] Length = 201 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 58/164 (35%), Gaps = 8/164 (4%) Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 P ++ + +L D K + A+ + + ++ Sbjct: 19 TPSMAGSVYGDRIKASQLADNDKDGVINVRDRCANTPRGAKVDNYGCPTVNKRLLSVELN 78 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 +FD + P ++K+ + + + + GHTD A N LS +RA Sbjct: 79 ILFDSGKYVVKPRFYGEVKKLADFMKSNAGSSVVIEGHTDDV---GAADYNEALSQNRAD 135 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334 + VL+ S + R+ I G+ + ++ + NRR+ Sbjct: 136 AIADVLINSFKIDRKRVEAI-GYGESKPIADNETIDGRATNRRV 178 >gi|149372847|ref|ZP_01891868.1| OmpA family protein [unidentified eubacterium SCB49] gi|149354544|gb|EDM43109.1| OmpA family protein [unidentified eubacterium SCB49] Length = 235 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 9/143 (6%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 ++ + G E GI+I+ D+ + FD + + L K+ VL Sbjct: 86 QAQEIESEIPGAEVERVDDGIVITF-DENSGVYFDTAKYNINTASQQNLDKLAGVLQEYV 144 Query: 264 EVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK 321 + + GHTD+ N LS RA + G+S R + + + Sbjct: 145 DTNVLVVGHTDSV---GSEDSNMLLSQRRAQAVTNYFTSTKGLSSSRFTT-NWYGEQTPV 200 Query: 322 IASDP--MNSANRRIDILVEDRQ 342 + + NRR++I++ + Sbjct: 201 GDNATPEGRAQNRRVNIVIVPNE 223 >gi|85374727|ref|YP_458789.1| hypothetical protein ELI_09500 [Erythrobacter litoralis HTCC2594] gi|84787810|gb|ABC63992.1| hypothetical protein ELI_09500 [Erythrobacter litoralis HTCC2594] Length = 170 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 8/117 (6%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + ++ +N FD LQ + L+ ++I GH D N Sbjct: 57 VRAVNGQNIIYFDTDRFNIDSADAAALQTQAQYLSQYPNVTVTIEGHADER---GTRDYN 113 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR-IDILV 338 L RA +A L+ G+ RIS +S + R + + NRR + +++ Sbjct: 114 LALGERRANAAKNYLVSLGIPATRISTVS-YGEERPVATASTPEAWAQNRRAVTVVI 169 >gi|116748592|ref|YP_845279.1| OmpA/MotB domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697656|gb|ABK16844.1| OmpA/MotB domain protein [Syntrophobacter fumaroxidans MPOB] Length = 182 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 58/158 (36%), Gaps = 13/158 (8%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT------PMFDKSSSI 243 + +D K ++ T G + + V T G I + +F S+ Sbjct: 26 ESSKDANKSLAPTAGGYIERQEAELVQRMTRADGTSIQREQDKLCITFNCGVLFPDDSTE 85 Query: 244 PLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ + + EVLA I + G TD + + + ++ RA + VL+ Sbjct: 86 LKPDAPARIAPVAEVLAKYPATSIKVDGFTDRT---GSEKYDHEITESRATAVRDVLVGK 142 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 G+ RI + GF + + NRR+ I + Sbjct: 143 GIDPARI-RARGFGDSKPLTTNATDEGRRTNRRVTITI 179 >gi|87121178|ref|ZP_01077069.1| Thrombospondin type 3 repeat:OmpA/MotB [Marinomonas sp. MED121] gi|86163670|gb|EAQ64944.1| Thrombospondin type 3 repeat:OmpA/MotB [Marinomonas sp. MED121] Length = 200 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 10/113 (8%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 F+ S+ + ++K+ + + + + GHTD N LS RA Sbjct: 77 VFFETDSTEIRFQYYKEIKKLADFMKDNPSSKVVIEGHTDN---SGRQSYNQSLSYKRAQ 133 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI--DILVEDR 341 + +L++S +S R+ I G++ R ++ NRR+ +I ++ + Sbjct: 134 AIADILIQSFKISAKRVKAI-GYSESRPIASNASAEGKKKNRRVVAEISIQTK 185 >gi|166712215|ref|ZP_02243422.1| hypothetical protein Xoryp_12360 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 438 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293 MF S+ + +L+++ L + + GHTD P R+ +DN+ LS RA Sbjct: 328 SMFPSGSAELDADQTHLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAE 387 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338 S VL +G+ + R + SG + P + NRR++IL+ Sbjct: 388 SVGAVL-AAGLRDRRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434 >gi|163786090|ref|ZP_02180538.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteriales bacterium ALC-1] gi|159877950|gb|EDP72006.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteriales bacterium ALC-1] Length = 627 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 10/114 (8%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 FD + P+ L + +L + I + HTD+ N LS R Sbjct: 518 ENIYFDFAKWDIKPQAARTLDILVALLKKYPRMEIQLGAHTDSR---AGFEFNMDLSHKR 574 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-----SDPMNSANRRIDILVED 340 A + + L+++G+S R++ G+ + + ++ S NRR + L+ Sbjct: 575 AKATLEYLVENGISRARLTS-KGYGETQPLVPCGDNCTETEFSINRRCEFLILK 627 >gi|330820746|ref|YP_004349608.1| putative outer membrane protein A precursor [Burkholderia gladioli BSR3] gi|327372741|gb|AEA64096.1| putative outer membrane protein A precursor [Burkholderia gladioli BSR3] Length = 222 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 7/117 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARD 283 +I ++ +F + P L ++ E +S+ G+TD+ Sbjct: 108 VIEHVNLSGDVLFASDHATLAPSARESLDQLLSERTDRVYSEVSVTGYTDSV---GSDEY 164 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 N LS RA S L G+ + +SG ++ NRR++I + Sbjct: 165 NLDLSKRRAESVAAYLSAHGLKTGSMK-VSGRGKADPVASNMTAEGRASNRRVEITL 220 >gi|253999219|ref|YP_003051282.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4] gi|253985898|gb|ACT50755.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4] Length = 222 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 7/116 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLS 288 D + FD S P VL + L A+ ++I GHTD + N LS Sbjct: 104 DIPSDISFDSGKSDIKPNFRPVLDSFAQSLVANPATRVTIVGHTDNT---GTDAVNNPLS 160 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+RA A L+ GV+ R + G H + ++ + NRR++I V + Q Sbjct: 161 LNRANHARDYLVTRGVASSRFTT-EGRGSHEPLVENNSDANRAKNRRVEIFVAEPQ 215 >gi|253997300|ref|YP_003049364.1| OmpA/MotB domain-containing protein [Methylotenera mobilis JLW8] gi|253983979|gb|ACT48837.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8] Length = 217 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 7/117 (5%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLS 288 D + FD + VL L + +++ GHTD + N LS Sbjct: 104 DIPSDISFDVGRADIKANFRAVLDTFATSLVNNPASNVTVIGHTDNT---GSDAVNNPLS 160 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 ++RA S ++ GV RI I G +A+D + NRR++I V + G Sbjct: 161 VNRAASVRDYVVARGVQHSRI-TIEGRGAREPLVANDTAANRAKNRRVEIFVAEPAG 216 >gi|50956519|gb|AAT90766.1| conserved hypothetical protein [uncultured proteobacterium QS1] Length = 372 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 6/110 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD S+ P + VL + + I I GHTD + A N ++S Sbjct: 254 DSLSLFDAGSTELKPGSTKVLINALANIKAQSGWLIEIVGHTDTT---GNAEQNLQISYA 310 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA + + + G + G A + ++D +ANRR+DI + Sbjct: 311 RASAVRDWMQRMGDIPSNCFVVQGAAGSQPITSNDTASGRAANRRVDIRL 360 >gi|114321676|ref|YP_743359.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114228070|gb|ABI57869.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 216 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 15/120 (12%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSL 289 + +F S P L+ + E + + I + GHTD A N LS Sbjct: 99 DSEALFGFDSDELTPGGRANLRNVIERINAMERVDSIRVNGHTDHI---GSAAYNQELSE 155 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---ASDPMNSA------NRRIDILVED 340 RA + +++ GV ++ I+ G+ R + ++ NRR++I VE Sbjct: 156 RRAAAVRTFMVQQGVDDNLITS-RGYGEDRPVKECPDNLSGSALIECLAPNRRVEIHVEG 214 >gi|162454125|ref|YP_001616492.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56'] gi|161164707|emb|CAN96012.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 274 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 8/116 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSL 289 +FD S + P + L+ + + + E + I GHTDA + N LS Sbjct: 71 EGKIVFDTSKATIRPGSEKTLETLLQFIKEHPEVTRLRIEGHTDAQ---SSEEHNQALSA 127 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 RA + L+ V+ DR+ + GF R ++ NRR++ V + G Sbjct: 128 RRALAVADWLVDHEVASDRLIAV-GFGESRPLGPNEIAAGRSENRRVEFHVAEVNG 182 >gi|148926911|ref|ZP_01810589.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni subsp. jejuni CG8486] gi|145844488|gb|EDK21596.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni subsp. jejuni CG8486] gi|284925406|gb|ADC27758.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. jejuni IA3902] Length = 165 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 8/118 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284 + D N FD P+ V+ + I++ G+ D N Sbjct: 52 QLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEW---GTDEYN 108 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 L L RA + + L+ GV+ DRI + + + NRR + + Sbjct: 109 QALGLKRAKAVKEALIAKGVNADRI-AVKSYGETNPVCTEKTKACDAQNRRAEFKLSR 165 >gi|153952154|ref|YP_001397367.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. doylei 269.97] gi|152939600|gb|ABS44341.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. doylei 269.97] Length = 165 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 8/118 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284 + D N FD P+ V+ + I++ G+ D N Sbjct: 52 QLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEW---GTDEYN 108 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 L L RA + + L+ GV+ DRI + + + NRR + + Sbjct: 109 QALGLKRAKAVKEALIAKGVNADRI-AVKSYGETNPVCTEKTKACDAQNRRAEFKLSR 165 >gi|107027050|ref|YP_624561.1| hypothetical protein Bcen_4708 [Burkholderia cenocepacia AU 1054] gi|116691753|ref|YP_837286.1| hypothetical protein Bcen2424_3655 [Burkholderia cenocepacia HI2424] gi|170736247|ref|YP_001777507.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia MC0-3] gi|254248991|ref|ZP_04942311.1| Flagellar motor protein [Burkholderia cenocepacia PC184] gi|105896424|gb|ABF79588.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116649753|gb|ABK10393.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424] gi|124875492|gb|EAY65482.1| Flagellar motor protein [Burkholderia cenocepacia PC184] gi|169818435|gb|ACA93017.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3] Length = 214 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + A++ ++ K + L+G +A R ++ I + Sbjct: 42 QLTSKLEEAVRARQLEAQQRKSLEQALAGPLAAG----------RVTLVNGRIGISGNVL 91 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S P +L+ + L E++ I G D DNW LS Sbjct: 92 FALNSDQLQPAGRDLLKTLAGPLATYLKTRDEILMISGFADDQQVHAGNRLFADNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + ++ +GV + + F + ++ D + NRR++I Sbjct: 152 KRALTVTRAMIDAGVPASSVFAAA-FGSEQPVSSNADDEGRAKNRRVEI 199 >gi|57237120|ref|YP_178132.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni RM1221] gi|86149517|ref|ZP_01067747.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151400|ref|ZP_01069615.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. jejuni 260.94] gi|86153754|ref|ZP_01071957.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597159|ref|ZP_01100394.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. jejuni 84-25] gi|121612869|ref|YP_999837.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. jejuni 81-176] gi|157414426|ref|YP_001481682.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. jejuni 81116] gi|167004808|ref|ZP_02270566.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni subsp. jejuni 81-176] gi|205356488|ref|ZP_03223252.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni subsp. jejuni CG8421] gi|218561794|ref|YP_002343573.1| peptidoglycan associated lipoprotein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283955557|ref|ZP_06373052.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni subsp. jejuni 1336] gi|315123715|ref|YP_004065719.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|1063274|emb|CAA58288.1| precursor of peptidoglycane associated lipoprotein [Campylobacter jejuni] gi|57165924|gb|AAW34703.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni RM1221] gi|85839785|gb|EAQ57044.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841747|gb|EAQ58994.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. jejuni 260.94] gi|85842715|gb|EAQ59927.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. jejuni HB93-13] gi|87250340|gb|EAQ73298.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. jejuni 81-176] gi|88190220|gb|EAQ94194.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni subsp. jejuni 84-25] gi|112359500|emb|CAL34284.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|157385390|gb|ABV51705.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni subsp. jejuni 81116] gi|205345675|gb|EDZ32314.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni subsp. jejuni CG8421] gi|283793018|gb|EFC31792.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni subsp. jejuni 1336] gi|307747070|gb|ADN90340.1| Peptidoglycan associated lipoprotein (Omp18) [Campylobacter jejuni subsp. jejuni M1] gi|315017437|gb|ADT65530.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315057553|gb|ADT71882.1| Outer membrane lipoprotein omp16 precursor [Campylobacter jejuni subsp. jejuni S3] gi|315926949|gb|EFV06311.1| peptidoglycan-associated lipoprotein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929959|gb|EFV09113.1| peptidoglycan-associated lipoprotein [Campylobacter jejuni subsp. jejuni 305] gi|315931507|gb|EFV10474.1| peptidoglycan-associated lipoprotein [Campylobacter jejuni subsp. jejuni 327] Length = 165 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 8/118 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284 + D N FD P+ V+ + I++ G+ D N Sbjct: 52 QLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEW---GTDEYN 108 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 L L RA + + L+ GV+ DRI + + + NRR + + Sbjct: 109 QALGLKRAKAVKEALIAKGVNADRI-AVKSYGETNPVCTEKTKACDAQNRRAEFKLSR 165 >gi|57168718|ref|ZP_00367850.1| omp18 [Campylobacter coli RM2228] gi|305432654|ref|ZP_07401815.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter coli JV20] gi|1245150|gb|AAC35420.1| omp18 [Campylobacter coli] gi|4454089|emb|CAA10786.1| PAL protein, putative [Campylobacter jejuni] gi|57019999|gb|EAL56679.1| omp18 [Campylobacter coli RM2228] gi|304444365|gb|EFM37017.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter coli JV20] Length = 165 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 8/118 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284 + D FD P+ V+ + + I++ G+ D N Sbjct: 52 QLNDTLGKVYFDFDKFNIRPDMQNVVNTNANIFNNEVSGVSITVEGNCDEW---GTDEYN 108 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 L L RA + + L+ GV+ DRI + + + NRR + + Sbjct: 109 QALGLKRAKAVKEALIAQGVNSDRI-AVKSYGETNPVCTEKTKACDAQNRRAEFKLSR 165 >gi|330892247|gb|EGH24908.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. mori str. 301020] Length = 150 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 51 FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 107 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 108 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 148 >gi|283955279|ref|ZP_06372779.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni subsp. jejuni 414] gi|283793193|gb|EFC31962.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni subsp. jejuni 414] Length = 165 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 8/118 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284 + D N FD P+ V+ + I++ G+ D N Sbjct: 52 QLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVNITVEGNCDEW---GTDEYN 108 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 L L RA + + L+ GV+ DRI + + + NRR + + Sbjct: 109 QALGLKRAKAVKEALIAKGVNADRI-AVKSYGETNPVCTEKTKACDAQNRRAEFKLSR 165 >gi|149921395|ref|ZP_01909848.1| OmpA domain protein [Plesiocystis pacifica SIR-1] gi|149817715|gb|EDM77180.1| OmpA domain protein [Plesiocystis pacifica SIR-1] Length = 224 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 66/200 (33%), Gaps = 12/200 (6%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 +E +T + + P + L D + Sbjct: 25 ASDTEPTQSLAEAPGSTALATSEQPTDAPVLAQASPEAAPPSDLDQDGIPDTLDQCPEDP 84 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + G ++ +L I I F S P + +L+ I VL Sbjct: 85 EDVDGDADEDGCPDLLCRLDPCEIAI-----FEKVYFAYDESTIEPRSFPLLKDIAFVLG 139 Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 +S + I I GHTD+ + + N LS R S + L+ GV++ ++S + G+ Sbjct: 140 YSPQVTIQIAGHTDS---KGRSEYNEGLSQRRVDSVREHLLSLGVNDQQLSSV-GYGEMT 195 Query: 320 LKIASDPMNSA--NRRIDIL 337 + NRR++ L Sbjct: 196 PIDTNRTEAGRAHNRRVEFL 215 >gi|86740618|ref|YP_481018.1| OmpA/MotB [Frankia sp. CcI3] gi|86567480|gb|ABD11289.1| OmpA/MotB [Frankia sp. CcI3] Length = 363 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F ++ P + L ++ L V+ + GH DA A N LSLDRA Sbjct: 260 FPVGAATLSPPARLWLDRVAAALRAGRVVVLVGGHADA---SGSATLNQALSLDRAQVIA 316 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 L GV D + +++GF + +ANRR++I+ Sbjct: 317 DYLTDRGVRPD-LIRVAGFGSRWPVADNATPRGRAANRRVEIV 358 >gi|302381938|ref|YP_003817761.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] gi|302192566|gb|ADL00138.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 356 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 8/118 (6%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIAR 282 +++ FD + P+ L ++ E++ + T I+I GHTD+ Sbjct: 219 RGTVVALSGDVTFDFDQATIRPDARPTLDRLAELIQATGGTGRIAIEGHTDSE---GTDA 275 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 N LS RA + L+ G S DR+ + G R +A+ D NRR+++++ Sbjct: 276 YNHDLSERRAEAVKAYLVPRGTSGDRLEAM-GIGEARPAVANDDDAGRRRNRRVEVIL 332 >gi|293611455|ref|ZP_06693750.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826239|gb|EFF84609.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123511|gb|ADY83034.1| OmpA/MotB [Acinetobacter calcoaceticus PHEA-2] Length = 159 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 +FD +++ L ++ L + I GHTD A N +LS + Sbjct: 52 PERLLFDFNNAQLKQSHEAELVRLANQLNKYDLNKLKIVGHTDDV---GDATYNQKLSEE 108 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA S + + G ++ I + G + + + + NRR+ I+V Sbjct: 109 RAQSVANLFLTRGFKKENIY-VIGRGSTQPYVPNTTNENRAINRRVAIVV 157 >gi|172064119|ref|YP_001811770.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6] gi|171996636|gb|ACB67554.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 224 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F + P L K+ A T +++ GHTD+ N LS R Sbjct: 118 GDALFATGLATLTPAARASLDKLLSERADRTYTQVTVTGHTDSV---GNDAANLALSKRR 174 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 A + L G++ + +SG ++ NRR+DI ++ Sbjct: 175 AETVAGYLKAHGLNA-QTVSVSGRGSADPVASNATAEGRASNRRVDISLQR 224 >gi|325267796|ref|ZP_08134446.1| OmpA family protein [Kingella denitrificans ATCC 33394] gi|324980677|gb|EGC16339.1| OmpA family protein [Kingella denitrificans ATCC 33394] Length = 221 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 10/157 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 A+ + + L GV E I +++ + F +S+ Sbjct: 62 ALACGAVGAGVGGYMDYQERKLREQLANTGVEVERKGNQIKLTMPENIT---FATNSAAL 118 Query: 245 LPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + L E LA E ++ GHTD++ N LS +RA + L + G Sbjct: 119 SAQAQNALATAAETLAKYNETTITVVGHTDST---GNDAINNPLSYNRANAVSSFLAQHG 175 Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 V+ R+ + G + ++ + NRR++IL+ Sbjct: 176 VATQRM-TVLGQGSRQPIADNNTEAGRAQNRRVEILI 211 >gi|261416894|ref|YP_003250577.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373350|gb|ACX76095.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326780|gb|ADL25981.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 774 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 10/112 (8%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS----IRGHTDASPFRNIARDNW 285 ++ F S+ +L+ I + L I+GHTD A+ N Sbjct: 647 EKLEGISFKSGSATVNANAKRILKGIAQKLKEDEAYKDLKIVIQGHTDNR---GKAKKNL 703 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 +LS RA + + L K GV+++RI + G + + NRRI+ Sbjct: 704 KLSDRRAKAVMKQLTKFGVAKNRIKAV-GLGSTCPVDDNSTADGREMNRRIE 754 >gi|170725705|ref|YP_001759731.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908] gi|169811052|gb|ACA85636.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908] Length = 190 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ + + + V +I L + + GHTD+ N LS RA + Sbjct: 88 FEFAQAEVMFAQWQVFTRIKRFLQEHDVKLCLLGHTDSV---GAEAGNMALSHLRALNVK 144 Query: 297 QVLM-KSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 ++L+ G + DR ++ G A ++D + NRR+++ VE Sbjct: 145 RILVDDLGFNPDRF-QVKGMADTHPVASNDFPEGRAMNRRVELFVE 189 >gi|165940436|ref|ZP_02228930.1| PAL/OmpA-family membrane protein [Yersinia pestis biovar Orientalis str. IP275] gi|165911633|gb|EDR30316.1| PAL/OmpA-family membrane protein [Yersinia pestis biovar Orientalis str. IP275] Length = 307 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + +L + I + GHTD A+ N LSL Sbjct: 172 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 228 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + L S VS + G+ R +D + NRR++I + Sbjct: 229 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 278 >gi|93005138|ref|YP_579575.1| OmpA/MotB [Psychrobacter cryohalolentis K5] gi|92392816|gb|ABE74091.1| OmpA/MotB [Psychrobacter cryohalolentis K5] Length = 533 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 57/175 (32%), Gaps = 7/175 (4%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 +N + L L + A + + + ++ + + + Sbjct: 312 VNAADTAALTKLVSDLQAAAPAMTVIAEGPLNEQTEIADSLTASEAAMDNLGQNPDPRDV 371 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 + F+ ++ +L + +++ + I GHTD + A N Sbjct: 372 ARALSLQVVNFEVDKAVIPDANKALLDRAVKLMEQVPNMTLMIIGHTDKT---ADAAYNL 428 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 +LS +RA + L+ GV ++ G + NRRI+ +V Sbjct: 429 KLSEERAQAMKAYLVAQGVDPSKLMT-KGMGETDPIADNTTDQGRFRNRRIEFVV 482 >gi|146276360|ref|YP_001166519.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145554601|gb|ABP69214.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 212 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ PE VL++ + E + GHTD A N L L RA + Sbjct: 68 FPFDSARLTPEAQRVLREQANWIRQFPEVRFRVYGHTD---LVGSASYNKSLGLRRAKAV 124 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 G+S R+ + + R I NRR Sbjct: 125 VAFFASQGISPSRLEALVSYGETRPVIPVATPEERNRR 162 >gi|237800227|ref|ZP_04588688.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806415|ref|ZP_04593119.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023084|gb|EGI03141.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027528|gb|EGI07583.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 167 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 68 FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 124 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 125 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 165 >gi|146299407|ref|YP_001193998.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146153825|gb|ABQ04679.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 666 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 78/240 (32%), Gaps = 14/240 (5%) Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 G+ ++ + L N L + + + K + Sbjct: 430 EQQISGTITDQETNETLSNVALILFDEAGKTAVEAKSDANGNYVFSNVKCGKKYYIKTAK 489 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 E+Y +S A L KK + V + + + Sbjct: 490 EDYLFKEVSITLKKATGSASLPIALEKKPKPITAIPVVIKTNNSIKPVKVTIAVGTDLGK 549 Query: 231 QRNTPM--FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRL 287 PM FD + ++ LQK+ ++L + IR HTD+ + + N L Sbjct: 550 LLKIPMNFFDLGKATIKKSSVPQLQKMVDMLNQYPTIKVDIRSHTDSR---SSSESNQIL 606 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 S RA S L+ G++ DR++ GF +L ++ + NRR + ++ Sbjct: 607 SDKRAQSTKDWLVSKGINADRLTA-KGFGETQLVNKCADGVKCTEQQHQQNRRSEFIIVS 665 >gi|253991307|ref|YP_003042663.1| hypothetical protein PAU_03834 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782757|emb|CAQ85922.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 577 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD S + VL + + + GHTD++ N LSL Sbjct: 437 NSMSLFDVGQSRLKAGSAKVLMNALIDIKAKPGWLIVISGHTDST---GNTEKNRVLSLA 493 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA + L+++ + G R + +ANRR++I + Sbjct: 494 RAEAVRDWLLQTSDIPLACFAVQGEGATRPVATNSTAAGRAANRRVEIRL 543 >gi|237799776|ref|ZP_04588237.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022631|gb|EGI02688.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6] Length = 229 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV + I + + F SS L + L Sbjct: 87 DKQEAALRESMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L GV + + + G Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQTHL-SVRGAGPD 199 Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR+++ ++ G Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226 >gi|224023377|ref|ZP_03641743.1| hypothetical protein BACCOPRO_00070 [Bacteroides coprophilus DSM 18228] gi|224016599|gb|EEF74611.1| hypothetical protein BACCOPRO_00070 [Bacteroides coprophilus DSM 18228] Length = 239 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 10/155 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + +F SS+ L K Sbjct: 74 KKMDKAAQQAQQIEGAEVEQVTDNNGLQAVKVTFDSG-ILFTTSSATLSSAAKASLSKFA 132 Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + ++I G+TD +RN ++ N LS +RA S L+ GVS +I Sbjct: 133 NNVLNQNRDMDVAIYGYTDNQGWRNSTKEQSVQKNLNLSQERAQSVSSYLLGCGVSASQI 192 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G + NRR+++ + Q Sbjct: 193 KSVEGMGESNPVADNSTEAGRQENRRVEVYMYASQ 227 >gi|163789308|ref|ZP_02183749.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteriales bacterium ALC-1] gi|159875376|gb|EDP69439.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteriales bacterium ALC-1] Length = 680 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 22/136 (16%) Query: 226 ISIIDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFR 278 I D + FD S + + +QK+ VL I IR HTD Sbjct: 541 IEPCDDLAKILDIPIIYFDFDKSNIRYDAEIEIQKVLAVLNKYPTMHIDIRSHTDCR--- 597 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------SDP-----M 327 A N +LS RA S Q L+ G++ +R++ G+ RL ++ Sbjct: 598 GPASYNEKLSDRRAKSTRQYLIDKGIAAERLTA-KGYGESRLVNDCGCEPTNESSCSQEE 656 Query: 328 NSANRRIDILVEDRQG 343 + NRR + ++ G Sbjct: 657 HQLNRRSEFIITSING 672 >gi|148261080|ref|YP_001235207.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5] gi|146402761|gb|ABQ31288.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5] Length = 456 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 7/149 (4%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L + V T +I I NT +F S+ + ++ KIG Sbjct: 310 NVLDRLRGFLQPEITKGEVAVLGTVNAPVIRIN---NTGLFASGSATVESTALPLISKIG 366 Query: 257 EVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + LA + + G+TD+ P +N LS DRA +A VL ++ + RI+ G Sbjct: 367 QALAREKGKVQVIGYTDSQPIHTLRFPNNLVLSEDRAKAAAAVLDRAIGDQSRITA-EGR 425 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQ 342 + + NRRI+I++ + Sbjct: 426 GAADPIATNATPQGRALNRRIEIVLIRSE 454 >gi|144900280|emb|CAM77144.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Magnetospirillum gryphiswaldense MSR-1] Length = 319 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289 + FD + S PE V+ + + T + + GH D + N LSL Sbjct: 212 KNFIVFFDFNKSDITPEASKVITQAVDTAKKGKTTRVDLTGHADR---SGPDKYNMALSL 268 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338 RA + ++K G+ D+I + G + NRR++I++ Sbjct: 269 KRANAVKAAMVKQGIPADQI-SVVGKGEAVPLVQTPDGVREPQNRRVEIVL 318 >gi|332186728|ref|ZP_08388471.1| type IV / VI secretion system , DotU family domain protein [Sphingomonas sp. S17] gi|332013380|gb|EGI55442.1| type IV / VI secretion system , DotU family domain protein [Sphingomonas sp. S17] Length = 475 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYS 294 +F S P + +IG + + I GH D +P DN LS RA + Sbjct: 367 LFRSGSDELEPGREPLFHRIGRAIEDEKGGVVIEGHADNTPVATVRFPDNMALSEARAET 426 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 +++ R++ G ++ NRR++I+V R Sbjct: 427 VAKLIRSDLSDPSRVTT-KGLGDTVPIASNADAAGKSQNRRVEIVVPRR 474 >gi|170691850|ref|ZP_02883014.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] gi|170143134|gb|EDT11298.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] Length = 168 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 6/111 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD S + V+ + +L S + I + G+TD N +LS R Sbjct: 52 PEKALFDFDKSAVRADASAVVDRSAVLLKRSKKPIIVEGYTDNV---GTLEYNQQLSEAR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 A + L+ GV +R+ + G A++ ++D + NRR +I+V Sbjct: 109 AVAVGYALVGRGVPMERV-RTKGNAYNNPIASNDTPEGRALNRRTEIVVRG 158 >gi|156974345|ref|YP_001445252.1| hypothetical protein VIBHAR_02060 [Vibrio harveyi ATCC BAA-1116] gi|156525939|gb|ABU71025.1| hypothetical protein VIBHAR_02060 [Vibrio harveyi ATCC BAA-1116] Length = 219 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 61/208 (29%), Gaps = 9/208 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +Q+ +S L + + I A Sbjct: 15 QATQRQNATTGEYETNSTTQGALIGAIAGAAIGLAVGDNAKERRKGALIGAAAGGATGAG 74 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + L + GV E L ++ N F SS L+ Sbjct: 75 VGYYFDQQEAELRRALLNSGVQVERVGENQL--LLRMENGIGFSSSSYQLDSSIHNTLRG 132 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + + G+TD++ N LS RA S Q L+ V+ R Sbjct: 133 VARILVEYPDTSLVIDGYTDST---GSDSYNQTLSERRAESVRQYLVSQKVAPGRAIA-R 188 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVE 339 G+ ++ + NRR++I + Sbjct: 189 GYGERNPICSNQTSDGRACNRRVEIQIL 216 >gi|146282939|ref|YP_001173092.1| ompA family protein [Pseudomonas stutzeri A1501] gi|145571144|gb|ABP80250.1| ompA family protein [Pseudomonas stutzeri A1501] Length = 263 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 97/249 (38%), Gaps = 14/249 (5%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN--SLTRDSEKGKDL 157 + + + S L+ + Q ++ L Q++E + D+ L Sbjct: 18 QDTEHELAQASAALERIQADGMVQRGAPKDLQRALETLQRAERFNDYWGGAEDARHYAYL 77 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 + + E +++ ++ + ++ LQD A+ +++ G ++ + + Sbjct: 78 SRRYSEIAARQGELLQHQEQVARLEMERDRLRRMLQD-AQLMTAEQQGRWLEDQMMSLAA 136 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276 T G+++++ D +F S+ L K+ L + + I G++D+ Sbjct: 137 SETDRGLVMTLGD----VLFHPDSAELGNSANRTLLKLVHFLQLNPQRKVRIEGYSDSR- 191 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 + N LS RA + +L+ G+ +R+ ++ G+ + + NRR+ Sbjct: 192 --GDPQANLELSRARAQTVADLLISLGIEAERV-EVRGYGERFPIAENASARGRAQNRRV 248 Query: 335 DILVEDRQG 343 +IL D G Sbjct: 249 EILFSDAAG 257 >gi|78189654|ref|YP_379992.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins-like [Chlorobium chlorochromatii CaD3] gi|78171853|gb|ABB28949.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins-like protein [Chlorobium chlorochromatii CaD3] Length = 211 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 +FD S + + LQ + + +I H D+ + N L R Sbjct: 106 GDILFDFDKSFIRKDAVPQLQDVAAWMKEHPTKNVTIEAHCDS---KGSEAYNIALGKRR 162 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 A +A L+ G+ +R+ IS + + + + + NRR+ +VE Sbjct: 163 ADAAKAYLVNKGIDSNRLKTIS-YGKDKPLMNGIDESARARNRRVHFVVE 211 >gi|330811386|ref|YP_004355848.1| OmpA family lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379494|gb|AEA70844.1| Putative OmpA family lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 165 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 66 FEYDSSDLKPEAMRALDVHAKDLKSNGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 163 >gi|254483240|ref|ZP_05096472.1| OmpA family protein [marine gamma proteobacterium HTCC2148] gi|214036463|gb|EEB77138.1| OmpA family protein [marine gamma proteobacterium HTCC2148] Length = 329 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 73/260 (28%), Gaps = 19/260 (7%) Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 D Q + + +S L+ K+ + S + Sbjct: 79 IDTQGTTSLMRPSDCSNAEAGSYFPSSGSLQASEPEGKETVFAIIAKAPLTSAETLLNNS 138 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 +T D L + + ++ L LAM I + Sbjct: 139 PGYVTLDETGTNQLLGDIRMAAASSQLALAETSYLVGNSQLAMSDPDLQYTTRGIIRKVV 198 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 A+ + + E + I+ F+ S + I L + G L Sbjct: 199 ESTEAEEGLNDAIGEVSFDVQSIN---------FEFGSDELAADGIRQLDEFGAALVSPE 249 Query: 264 EVI---SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHR 319 + GHTD N LS RA + L + V R+ ++ G + Sbjct: 250 LEQLKLRVAGHTDDQ---GEESYNLDLSQRRAKAVALYLESNYEVDSGRL-EVVGMGEEK 305 Query: 320 LKIASDP--MNSANRRIDIL 337 + + NRR++++ Sbjct: 306 PLVPDASLEARAKNRRVEMV 325 >gi|66044258|ref|YP_234099.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] gi|63254965|gb|AAY36061.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] gi|330945118|gb|EGH46848.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B] gi|330969323|gb|EGH69389.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT] Length = 229 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV + I + + F SS L + L Sbjct: 87 DKQEAALRESMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L GV + + + G Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQAHL-SVRGAGPD 199 Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR+++ ++ G Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226 >gi|256424721|ref|YP_003125374.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] gi|256039629|gb|ACU63173.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] Length = 677 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 14/201 (6%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 D+E + +++ ++ F P L + + + V + Sbjct: 480 DNEGNFHFALDSLTAYALDGQKPLFRPELGVAVTTNGLTESAVLHRDLYLEKIEVETVVN 539 Query: 210 NIVKGVLFETTRTGILISIID--QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI- 266 + V + I + + FD + P+ L K+ ++ + Sbjct: 540 KPKEPVPAKGIGAPRKIELGNKFNPQNIYFDLGKADIRPDVAKELDKLIALMKENANWKV 599 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--- 323 + HTD+ + N +LS RA S + G+ + R++ G+ +L Sbjct: 600 DMSFHTDSR---SDDNYNMKLSQRRATSTLNYFLSKGIDKKRLTA-KGYGETKLINRCAN 655 Query: 324 ----SDPMNSANRRIDILVED 340 ++ + ANRR + V + Sbjct: 656 GVNCTEEEHKANRRAEFTVLE 676 >gi|217979014|ref|YP_002363161.1| type VI secretion system OmpA/MotB family protein [Methylocella silvestris BL2] gi|217504390|gb|ACK51799.1| type VI secretion system OmpA/MotB family protein [Methylocella silvestris BL2] Length = 493 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 7/144 (4%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 ++ + L + + + T I+I IID+ +F S L + ++ I Sbjct: 350 QLDHVRNVLAPNIQSGALSVDATANQIVIRIIDR---ALFQPGKSTMLDDVKPLMMYIAM 406 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + + GH+D +P N N+ LSL+RA +L +S +R+ G Sbjct: 407 ALDDDRGAVKVIGHSDNTPISNARFASNFELSLERANVVGALLKQSLSHPERVET-EGKG 465 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 +D + NRR++I+V Sbjct: 466 ADAPIAPNDTPEGRAKNRRVEIVV 489 >gi|113969260|ref|YP_733053.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4] gi|113883944|gb|ABI37996.1| OmpA/MotB domain protein [Shewanella sp. MR-4] Length = 485 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 8/111 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S LPE+ VL+ + L + + GHTD + N LS RA + Sbjct: 378 LFDYDSERMLPESKPVLEVLASYLKQNPTLSFYVVGHTDD---KGERSYNQSLSERRAAA 434 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + L + +++ G + ++ NRR+++++ + Sbjct: 435 VIKQLSDGFKIPSAQLTA-HGNGEYSPVASNTNDAGQKLNRRVELVLRSDK 484 >gi|295700038|ref|YP_003607931.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] gi|295439251|gb|ADG18420.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] Length = 217 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 20/168 (11%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 LS + +K+++ K + L+G +A R ++ I +F Sbjct: 44 LSNKLEHEVKQRQAETQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGNVLF 93 Query: 238 DKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSLD 290 +S+ PE +L+ + L S +++ + G TD R DNW LS Sbjct: 94 ALNSAQLQPEGRALLKSLAGPLSAYLRASDQILMVSGFTDDQRLREGNRRFADNWELSAQ 153 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ G+ + + F + ++ + + NRR++I Sbjct: 154 RALTVTRALIDEGLPASSVFAAA-FGSEQPVSSNADESGRAKNRRVEI 200 >gi|296157423|ref|ZP_06840258.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] gi|295892195|gb|EFG71978.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] Length = 584 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 11/108 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-----IRGHTDASPFRNIARDNWRLSLDR 291 F +S+ + L + VL + G++D + N +LS R Sbjct: 478 FASASARVPASAVEDLNQSAHVLNACAGNGKTARLEVAGYSDNV---GGEQANLQLSKQR 534 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 A + L+K+GV D + G+ R ++D + NRRI+ + Sbjct: 535 AEAVRAYLVKTGVPADSLIA-QGYGGARPVASNDTASGRFANRRIEFV 581 >gi|90020235|ref|YP_526062.1| OmpA domain-containing protein [Saccharophagus degradans 2-40] gi|89949835|gb|ABD79850.1| OmpA/MotB [Saccharophagus degradans 2-40] Length = 381 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 81/272 (29%), Gaps = 15/272 (5%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID--EHITKNSVDLKIGSTNQKKQYQR 126 + P+ + + D + N + D++ Sbjct: 105 WKPYLVSGIGGRNVDVDGFGDSSSTFVNAGVGIKGLLAENFQVRGDVRALHDLDDSFNDV 164 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 N +++ K ++ + S + + + P K Sbjct: 165 GVNVGLAYVFGGKAKASKPTVKPAATTPAKPMDSDNDGVANTLDACPATPANVKVDAKGC 224 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 +A S + + + + I++ Q FD +S++ Sbjct: 225 ALDSDNDGVADYQDSCANTAATHKVDAKGCSLSLTETVAINLSIQ-----FDNNSAVVKE 279 Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304 ++++ + + +S+ G+TD A N +LS RA + L+ + Sbjct: 280 SYYAEVKRVADFMNQYANTQVSVEGYTDDR---GSAAYNKQLSQKRADAVKATLVSQFNI 336 Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRI 334 R++ +GF +D +ANRR+ Sbjct: 337 DAARVTA-TGFGEINPIDTNDTAAGRAANRRV 367 >gi|257125599|ref|YP_003163713.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b] gi|257049538|gb|ACV38722.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b] Length = 256 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 78/216 (36%), Gaps = 9/216 (4%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 ++ N + ++ E ++ D + P S+++ Sbjct: 40 DIEKDSENNVPILDTPNPEKLTDNDNPDLITVTLPQNEKNTSLLDKGGTQPEQSPKSQDQ 99 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + +++ ++ + S + + I + D F K+S Sbjct: 100 DVISQQQGIRSEIKESASLDTNTQENSINNPQKVQILKSEIITLRAEDLN----FHKNSI 155 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 E VL+ I + + ++SI G+TD IA N RLSL RA L++ Sbjct: 156 NLKEEAYSVLKDIKNYIEENDYLVSIVGYTDE---SGIAAYNNRLSLRRAEKVSSKLLEL 212 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 G+S+DRI + G + +++ NRR++ Sbjct: 213 GLSKDRILDLIGRGENNPINSNETKEGRERNRRVEF 248 >gi|91792625|ref|YP_562276.1| OmpA/MotB [Shewanella denitrificans OS217] gi|91714627|gb|ABE54553.1| OmpA/MotB [Shewanella denitrificans OS217] Length = 223 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 62/196 (31%), Gaps = 10/196 (5%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 ++++ +I I A + + + Sbjct: 31 GEEQNAKATNGAMIGAIAGAAIGVASASKKDRAKGALIGAASGAAVGTGIGYYMDVQEAK 90 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L GV + I++++ + F ++ VL + V + Sbjct: 91 LRKQLKSTGVSVTRSGDNIILNMPNDVT---FGVDETVLSSRAKEVLASVALVAKEFDDT 147 Query: 266 I-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I G+TD+ N RLS RA Q LM+ V+ +R+ SG + Sbjct: 148 RLHITGYTDS---SGSDSYNLRLSQVRANEVGQYLMQQKVAANRVVS-SGRGESSPIADN 203 Query: 325 DP--MNSANRRIDILV 338 + NRR++I++ Sbjct: 204 GTPAGRAQNRRVEIVL 219 >gi|17549701|ref|NP_523041.1| hypothetical protein RS03061 [Ralstonia solanacearum GMI1000] gi|17431956|emb|CAD18633.1| putative outer membrane transmembrane protein [Ralstonia solanacearum GMI1000] Length = 215 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 20/173 (11%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 LS +K+++ K + L+G +A R ++ I Sbjct: 39 AVQLELSSRLENEVKQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGIS 88 Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNW 285 + +F +S PE + +L+ + L E++ + G D DNW Sbjct: 89 GSVLFALNSDQLQPEGLELLKSLAGPLSAYLRSRDEILMVSGFADDQQVHAGNRRFADNW 148 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 LS RA + + L+ +G+ + + F + ++ D + NRR++I Sbjct: 149 ELSAKRALTVTRALIDAGIPGASVFAAA-FGSEQPVSSNADDAGRAKNRRVEI 200 >gi|103488577|ref|YP_618138.1| OmpA/MotB [Sphingopyxis alaskensis RB2256] gi|98978654|gb|ABF54805.1| OmpA/MotB [Sphingopyxis alaskensis RB2256] Length = 230 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 64/200 (32%), Gaps = 11/200 (5%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + R K L + + +++ + A + + Sbjct: 26 DPVTGERKISKAAIGGVGGALGGYLLGDLIGGRSDRTEKIVGAGIGAVAGAGVGYYMDQQ 85 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L G+ E +++++ FD +S++ + L + LA Sbjct: 86 EKKLRERTAGTGIDVERQGDQLVLNMPGDVT---FDLNSAMVKSQFRSALDNVAATLAEY 142 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I + GHTD++ N LS RA S L G+ R+ G+ +LK Sbjct: 143 PSTYIDVYGHTDST---GSETYNQGLSERRAASVADYLAGRGIQRARM-ATLGYGESQLK 198 Query: 322 -IASDPMN--SANRRIDILV 338 NRR++I + Sbjct: 199 CAPERTEADYQCNRRVEIRI 218 >gi|268679796|ref|YP_003304227.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268617827|gb|ACZ12192.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 266 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 79/189 (41%), Gaps = 16/189 (8%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 + T ++N + K+K +L+++A+ + + Sbjct: 63 PEETTPVMNLNVKSGDAGKEKEKDKGNVGGMSAQLEEIARMAQMIEKMSLGEG------- 115 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVISIR--GHTDA 274 + I +I +F S+ ++++ L++I +++ + + + G TD Sbjct: 116 -SLDQKIDGAIFKLPTKMLFAPGSAEITNSDSMLFLKRISDIITMLPQNVDVVVKGFTDT 174 Query: 275 SPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330 +P + +DN LS RA + +VL+++G++++R+S G+ + ++D Sbjct: 175 TPPPRGSKYQDNLELSSARANAVIRVLIRNGIAKERLSSA-GYGDTKAIASNDTDEGREK 233 Query: 331 NRRIDILVE 339 N R++ + Sbjct: 234 NSRVEFTMR 242 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 39/97 (40%), Gaps = 1/97 (1%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM 77 KKK + P W + YADF+++L+A F+ ++ + + + + KA+++ F Sbjct: 3 KKKCKPTECPAG-EKWAVPYADFLSLLLALFIALYALASVNTEKMKALKEEFVKIYDYSA 61 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 + + K ++ S L+ Sbjct: 62 KPEETTPVMNLNVKSGDAGKEKEKDKGNVGGMSAQLE 98 >gi|84624549|ref|YP_451921.1| hypothetical protein XOO_2892 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84368489|dbj|BAE69647.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 438 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293 MF S+ + +L+++ L + + GHTD P R+ +DN+ LS RA Sbjct: 328 SMFPSGSAELDADQTYLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAE 387 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPM-NSANRRIDILV 338 S VL +G+ + R + SG + P + NRR++IL+ Sbjct: 388 SVGAVL-AAGLRDRRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434 >gi|298207484|ref|YP_003715663.1| OmpA family protein [Croceibacter atlanticus HTCC2559] gi|83850120|gb|EAP87988.1| OmpA family protein [Croceibacter atlanticus HTCC2559] Length = 626 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 61/163 (37%), Gaps = 10/163 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + ++ + +S D + + I+ N +FD S Sbjct: 468 EQAYQAQVNIDDYESNSVTMAATKDATKELTVRLKPIEAIVTEDRVILNPILFDYDKSNI 527 Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 P+ L K+ +V+ E+ I + HTD + N LS RA S Q ++ G Sbjct: 528 KPQAAFELDKLVQVMNKYPEMEIFVESHTDN---KGPNDYNMSLSERRAKSTVQYVVSKG 584 Query: 304 VSEDRISKISGFAHHRLKIA-----SDPMNSANRRIDILVEDR 341 ++++RI GF + + SD NRR + ++ + Sbjct: 585 IAKERI-SGKGFGESKPAVECGENCSDEQRQTNRRSEFVIIKK 626 >gi|325286633|ref|YP_004262423.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324322087|gb|ADY29552.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 235 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 65/212 (30%), Gaps = 17/212 (8%) Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 + + K + + E + + R+ Sbjct: 25 DAVQNANNKQKGGAIGAAGGAILGAIIGNNVGKGGNGELGAVIGGVVGGGAGVLIGNRMD 84 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 A+KI + G + + G++ D+ + FD + + L Sbjct: 85 KQAQKIEEEIPGAQVERVDDGIVVT----------FDENSGVFFDTAKYNINGASKTSLD 134 Query: 254 KIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 K+ V + + GHTD+ A N LS +RA + L G++ R + Sbjct: 135 KLANVFIEYPDTNILVVGHTDS---SGAADYNMTLSKNRANAVTSYLTAKGIAASRFTT- 190 Query: 313 SGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 F + + + NRR+++ + + Sbjct: 191 EWFGEEKPTHDNSTPEGRAKNRRVNVAILPNE 222 >gi|213969192|ref|ZP_03397331.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. tomato T1] gi|213926190|gb|EEB59746.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. tomato T1] Length = 151 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 52 FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 108 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 109 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 149 >gi|89070721|ref|ZP_01157983.1| flagellar motor protein [Oceanicola granulosus HTCC2516] gi|89043679|gb|EAR49884.1| flagellar motor protein [Oceanicola granulosus HTCC2516] Length = 1022 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 99/305 (32%), Gaps = 21/305 (6%) Query: 51 MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN- 109 M + T ++ ++A+ A + +R + Sbjct: 725 MAALEQTTEEEREALRARLAEAVAARDAARQLADSRLTDLQRRDALLATANAALEGEAAI 784 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 S + + +Q RL N + L ++ + + + L ++ + Sbjct: 785 SAEAQREIALLNEQVTRLRNQVGSLQALLDVAEDEDRANQVQFEALGAQLNNALARAAAE 844 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 E ++ + L + + QDL + S L + +L I Sbjct: 845 ERRRRELEEAERRRLEEEAARLEQDLQQFRSDFFGQL------RQLLEGREGVQIAGDRF 898 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGHTDASPFRNI- 280 + +F S+ + + ++L VI + GHTD P Sbjct: 899 VFSSEVLFAPGSATLSNAGRAQIASVADLLRDIADDIPDGIDWVIRVDGHTDDLPLSGTG 958 Query: 281 -ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 DNW LS RA S + + G DR+ +GF H+ I D + NRRI++ Sbjct: 959 EYADNWELSQARALSVVRYMEDFLGFPPDRL-AANGFGEHQPLIDEDTEEARAANRRIEL 1017 Query: 337 LVEDR 341 + +R Sbjct: 1018 KLTER 1022 >gi|308186535|ref|YP_003930666.1| type VI secretion system, core protein [Pantoea vagans C9-1] gi|308057045|gb|ADO09217.1| Putative type VI secretion system, core protein [Pantoea vagans C9-1] Length = 412 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 55/137 (40%), Gaps = 7/137 (5%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + V ++++ + +F +++ I V+++I + + + Sbjct: 263 LKPEIDAGLVAVRDEADRSVVTL---KGDGLFASAATEVRGGYIDVIRRIAAAMNNVSGQ 319 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I + G++D P R+ N+ LSL RA S +L + R+ G + + Sbjct: 320 IQVIGYSDNVPIRSARFASNFELSLARARSVQTLLQQQLAQPSRVKA-EGRGESNPLVPN 378 Query: 325 DPM--NSANRRIDILVE 339 + NRR++I + Sbjct: 379 TSAENRARNRRVEITLL 395 >gi|268316337|ref|YP_003290056.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252] gi|262333871|gb|ACY47668.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252] Length = 253 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 67/173 (38%), Gaps = 13/173 (7%) Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + +P + + + K++L+ + L N+ V T G+ + I Sbjct: 65 QSEAVIPSIKNQVVQRRLSKEQLEK----YEELIQYLQEHNLEGKVQVNLTDKGLHLIIT 120 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLS 288 D MF + + + +L+ + ++ E + + GHTD P NW LS Sbjct: 121 DS---IMFRSGEAEIIEPSRTILRILAGIIDDRIESVVVEGHTDNRPIHTARFPSNWELS 177 Query: 289 LDRAYSAYQVLMKS--GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 RA + + L++ + R + G+ + + + NRR++IL Sbjct: 178 AARAAAVVRFLLEQTDALPPSRYMAV-GYGEFHPRDTNATPEGRARNRRVEIL 229 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 19/41 (46%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 W ++D T+L+ FF+++ ++ + K +F Sbjct: 18 APFWMTTFSDMATLLLTFFVMIVAMSEVEVKKFKEALSFFQ 58 >gi|222054709|ref|YP_002537071.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] gi|221563998|gb|ACM19970.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] Length = 474 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD ++ E + ++GE + + ++ GHTD N LS RA S Sbjct: 243 FDIDKALIRAEDHREIARVGEFMQRYPDTTAVIEGHTDNV---GTDEHNLDLSRRRAESV 299 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ G+ R+S +G+ + NRRID +++ Sbjct: 300 TNYLVDKFGIDRSRLSS-TGYGFKHPVADNGTEAGKQKNRRIDAIID 345 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 11/138 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLA 260 N + + IS ++ + F+ + P + K+ E + Sbjct: 331 EAGKQKNRRIDAIIDCAFDVTKISPPERLCMSLLMEFETGRAEIQPRYHDEIAKVAEYMK 390 Query: 261 HSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHH 318 + I GHTD + A N +LS +RA + L++ G+ R+S G+ Sbjct: 391 RYPTTTALIEGHTDNT---GTADFNQKLSQERAENVVNYLVEKLGIERSRLSA-KGYGAS 446 Query: 319 RLKIASDPMNSA--NRRI 334 R + NRRI Sbjct: 447 RRLAYNTTAEGRKKNRRI 464 >gi|84500108|ref|ZP_00998374.1| flagellar motor protein [Oceanicola batsensis HTCC2597] gi|84392042|gb|EAQ04310.1| flagellar motor protein [Oceanicola batsensis HTCC2597] Length = 852 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 89/282 (31%), Gaps = 16/282 (5%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 +L + ER+++ + + ++ S + Sbjct: 572 DLRRQLAAALAAKLEAERAAEESMSEAEQRAALLRQATQELESEQASSADAARRTTVLNQ 631 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +Q + + + +S+ + N L + E+ + ++ + Sbjct: 632 QVAQLRAQLSSLQALLDDYKDRDAANQVQIQSLGSDLNAALAQKAAEERRRRQLEEAERR 691 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILI--SIIDQRNTPMFDKSSSIPLPETIVVL 252 + + L ++ + + G+ I + +FD + + Sbjct: 692 RLEAEAERLQKYRSEFFGQLRDVFAGQEGVKIVGDRFVFSSEVLFDPGQADLSEGGQRQI 751 Query: 253 QKIGEVLAH--------STEVISIRGHTDASPFRN--IARDNWRLSLDRAYSAYQVLMK- 301 I L V+ + GHTD P +DNW LS RA S + + Sbjct: 752 AGIAATLRSLADEIPEGIDWVLRVDGHTDDVPLSGQGEFQDNWELSQARALSVVRYMEDF 811 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 G DR+ +GF H+ + D + NRRI++ +R Sbjct: 812 LGFPPDRL-AANGFGEHQPIASGDSEAARAANRRIELKFTER 852 >gi|15835503|ref|NP_297262.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum Nigg] gi|7190917|gb|AAF39684.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum Nigg] Length = 202 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETI-VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S E +L + L S + I GHTD A N L RA + Sbjct: 98 FATDSYSIKGEDNLTILASLVRHLRKSPKTTLYIEGHTDER---GAAAYNLALGARRANA 154 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 Q L+K G++ DR+ IS + + ++ NRR + + R Sbjct: 155 VKQYLIKQGIASDRLFTIS-YGKEHPVHSGHNELAWQQNRRTEFKIHAR 202 >gi|117919364|ref|YP_868556.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3] gi|117611696|gb|ABK47150.1| OmpA/MotB domain protein [Shewanella sp. ANA-3] Length = 485 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 8/111 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S LPE+ VL+ + L + + + GHTD + N LS RA + Sbjct: 378 LFDYDSERMLPESKPVLEVLASYLKQNPKLSFYVVGHTDD---KGERSYNQSLSERRAAA 434 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + L + +++ G + ++ NRR+++++ + Sbjct: 435 VIKQLSDGFKIPSAQLTA-HGNGEYSPVASNTNDAGQKLNRRVELVLRSDK 484 >gi|326800605|ref|YP_004318424.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] gi|326551369|gb|ADZ79754.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] Length = 441 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 8/106 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F + LPE+ VL+ I +LA I + GHTDA + N LS RA + Sbjct: 337 LFSTGQATILPESEGVLKFIASILAEDQAAKIQVVGHTDAV---GDDKSNQILSERRAEA 393 Query: 295 AYQVL-MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 + L + G++E + SG + + NRR++ + Sbjct: 394 VKRALTTRYGIAEISLQT-SGKGESEPVADNQTVKGRTRNRRVEFI 438 >gi|320015664|gb|ADV99235.1| putative exported protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 578 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + +L + I + GHTD A+ N LSL Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + L S VS + G+ R +D + NRR++I + Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549 >gi|313200172|ref|YP_004038830.1| ompa/motb domain-containing protein [Methylovorus sp. MP688] gi|312439488|gb|ADQ83594.1| OmpA/MotB domain protein [Methylovorus sp. MP688] Length = 170 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +FD + ++ + +QK+ + L + I GH DA+ N LS R Sbjct: 63 DKLLFDTNQAVLNDRSRGAVQKVSKALQSVGLNKMRIEGHADAT---GRESYNVELSEQR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A++ ++SG+ + I + G ++ + NRR+ I+V Sbjct: 120 AWAVADAFIQSGMPKSGII-VRGMGSQSPVASNATVAGRAENRRVSIIVVTD 170 >gi|223039685|ref|ZP_03609971.1| putative chemotaxis protein MotB [Campylobacter rectus RM3267] gi|222879068|gb|EEF14163.1| putative chemotaxis protein MotB [Campylobacter rectus RM3267] Length = 369 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 109/351 (31%), Gaps = 41/351 (11%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVM-------WIINATDDDTKK--------AI 65 + + ++ I YAD M LM F+++ ++++ +D + I Sbjct: 2 KTRSEGKSGDQTFWISYADLMAGLMFVFMLIIGAVVVKYVLSQSDLAKLQKDLSEREKQI 61 Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 N + + + + + + + + K TN + Y+ Sbjct: 62 ASSQNELVRKENVIKEIFSNLDRAKSENKELADINRLVNEMLEGVKKEKNELTNLTQTYE 121 Query: 126 RLENNIFYLSNSQQS---EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 N+ Q + + RD E I F +S+ Sbjct: 122 INLNDANKTIADLQDRVLQLGQILAQRDETLKDVNATLAQKEDVIKVLNEKFNSEISRYL 181 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 L K + S + + G + ++S+ + +FD S Sbjct: 182 ALEEDFNKTKDKIKDLSSLRSNVISNLRAKLGGKVNIDPSSGVVSLPES---ILFDTGSY 238 Query: 243 IPLPETIVVLQK----------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 E V L++ E + + I I GHT++ N LS RA Sbjct: 239 ELKDEAKVRLKEILQTYFEAILNSEEIIKHIDRIVIEGHTNSV---GSYMYNLDLSQKRA 295 Query: 293 YSAYQVLMKSGVSE--DRISKISGFAHHRLKIAS---DPMNSANRRIDILV 338 YS + + +R SG + L I + DP S RRI+I + Sbjct: 296 YSVLDFIYSWNKDKRLERYLIASGRSFSDLVIKNGKEDPDAS--RRIEIKI 344 >gi|209809374|ref|YP_002264912.1| outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] gi|208010936|emb|CAQ81341.1| outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] Length = 212 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 71/189 (37%), Gaps = 12/189 (6%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG-- 214 D ++ + + + + L ++ VA+ + + Sbjct: 28 PKTKEDAPYPTFEDPYVESQEKVIDVVDSKEVTSALTGPNGELKDDDMRKVAEQLTQMGI 87 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273 V E + ++I+I ++ + F + + P +L ++ ++A E+ + GHTD Sbjct: 88 VYHEMSDDQLVITIQEKVH---FASAQATLTPLATSLLNQLISIMATKPELALVLDGHTD 144 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--N 331 A +N LS R+ + L+ + ++ ++ GF + ++ N Sbjct: 145 ---ISGNAINNQNLSEKRSNEVRRYLLDNNLNASQLYS-RGFGEYLPLCDNETTLGRKCN 200 Query: 332 RRIDILVED 340 RR++I V Sbjct: 201 RRVEITVLK 209 >gi|157368311|ref|YP_001476300.1| putative outer membrane lipoprotein [Serratia proteamaculans 568] gi|157320075|gb|ABV39172.1| OmpA/MotB domain protein [Serratia proteamaculans 568] Length = 220 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMKGTGVSVTRQGDNIVLNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + ++I G+TD++ N LS RA L+ GV+ +R+ + SG Sbjct: 137 VLKEYPKTAVNIIGYTDST---GSRALNMTLSQQRADGVGSALITQGVAANRV-RTSGAG 192 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 ++ + NRR++I + Sbjct: 193 PDNPIASNSTTEGKAQNRRVEITL 216 >gi|77460622|ref|YP_350129.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1] gi|77384625|gb|ABA76138.1| putative OmpA family lipoprotein [Pseudomonas fluorescens Pf0-1] Length = 165 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 66 FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 163 >gi|332291485|ref|YP_004430094.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332169571|gb|AEE18826.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 293 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 96/281 (34%), Gaps = 10/281 (3%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 I + MTA Q++ D + +I + + Sbjct: 3 ISRVTKNTLLIAMTAGALTSCVSKKKYTQLQSEYDTTKVTLTKTKVEKEEIEAKYAAIEQ 62 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + + N S + + S E + ++ K + + P + Sbjct: 63 RVDDYNTKINSLRDTNVDLQASNDAKFEITTNGTVMSENTKQKLRAALANVDPSELAQAQ 122 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 ++ L K + + N + + + T + ISI D+ +F S Sbjct: 123 TLEDSMNLAVSHKLKRNLNKDIYGANALDDINIDIDDTVVQISISDKM---LFRSGSYRV 179 Query: 245 LPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLM- 300 E +L++I V+ + + GHTD+ + + DNW LS+ RA + + L Sbjct: 180 SKEADALLRRIAAVVNSEPAVEVMVEGHTDSRTVKKGSYLKDNWDLSVQRATAIVRELQT 239 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 K V ++ SG + + + +D S NRR IL+ Sbjct: 240 KHNVDPSKLIA-SGRSSYVPLVENDSKENMSRNRRTRILIL 279 >gi|170699332|ref|ZP_02890380.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|170135762|gb|EDT04042.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] Length = 219 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F S++ L K+ + + G+TDA+ N LS R Sbjct: 113 GDAYFATDSAVLTSAATAALDKLLNQQGDRHFARVEVDGYTDAT---GSDGHNQALSKRR 169 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 A + L + G+ D +G ++D + NRR++I ++ Sbjct: 170 ADAVAGYLREHGLKADAF-AATGHGEANPAASNDTVEGRARNRRVEISLQK 219 >gi|170702768|ref|ZP_02893624.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|170132317|gb|EDT00789.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] Length = 222 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F + P L K+ T +++ GHTD+ N LS R Sbjct: 116 GDALFATGLATLTPAARASLDKLLSEREDRTYTQVTVTGHTDSV---GNDAANLALSKRR 172 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 A + L G+ + +SG ++ NRR+DI ++ Sbjct: 173 AETVAGYLKAHGLKA-QTVSVSGRGSADPVASNATAEGRASNRRVDISLQR 222 >gi|146291559|ref|YP_001181983.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32] gi|145563249|gb|ABP74184.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32] Length = 481 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 8/111 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S LPE+ VL+ + L + + GHTD + N LS RA + Sbjct: 374 LFDYDSERMLPESKPVLEVLATYLKQNPALSFYVVGHTDD---KGERSYNQSLSERRAAA 430 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342 + L ++ + +++ G + + +D NRR+++++ + Sbjct: 431 VIKQLNEAFNIPSVQLTA-HGNGEYSPVASNANDTGQRLNRRVELVLRSDK 480 >gi|294670063|ref|ZP_06735018.1| OmpA family protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308146|gb|EFE49389.1| OmpA family protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 162 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 F +SS L + L + +I GHTD + N LS Sbjct: 42 PENVTFPTNSSTLNANAQNALAAAAQTLTQYHDTTLTINGHTDNT---GSDAINDPLSQR 98 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 RA + L GVS R++ I G + ++ + NRR++IL+ Q Sbjct: 99 RAQAVASYLQSRGVSASRMN-IFGHGSRQPIASNATVEGRAQNRRVEILINPDQ 151 >gi|237721048|ref|ZP_04551529.1| outer membrane protein [Bacteroides sp. 2_2_4] gi|293372983|ref|ZP_06619352.1| OmpA family protein [Bacteroides ovatus SD CMC 3f] gi|229449883|gb|EEO55674.1| outer membrane protein [Bacteroides sp. 2_2_4] gi|292632051|gb|EFF50660.1| OmpA family protein [Bacteroides ovatus SD CMC 3f] gi|295084441|emb|CBK65964.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Bacteroides xylanisolvens XB1A] Length = 238 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + + +F ++ L K Sbjct: 74 KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 132 Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + +SI G+TD ++N N LS +RA S L+ GVS ++I Sbjct: 133 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 192 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G ++D NRR+++ + + Sbjct: 193 KSVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 227 >gi|186470892|ref|YP_001862210.1| DotU family type IV/VI secretion system protein [Burkholderia phymatum STM815] gi|184197201|gb|ACC75164.1| type IV / VI secretion system protein, DotU family [Burkholderia phymatum STM815] Length = 410 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 7/156 (4%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + + + + L + V +S+ R +F+ S Sbjct: 257 RQAEPPVSPIDALAGRLAGHLADEVNAGTVTLAENAQHTTLSL---RLEGIFEAGQSSVN 313 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGV 304 P ++ IG+ +A + + + GHTD+ PF N LS RA Q+L+ +GV Sbjct: 314 PWVKPLITTIGQEVAKTPGRVLVTGHTDSQPFSHMQRSSNLALSDARAQEVAQILVSAGV 373 Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + DRI +G + + NRR++I V Sbjct: 374 ATDRIDS-TGKGNAEPAADNATPQGRLRNRRVEITV 408 >gi|224438536|ref|ZP_03659456.1| hypothetical protein HcinC1_11101 [Helicobacter cinaedi CCUG 18818] gi|313144962|ref|ZP_07807155.1| membrane-protein map18 [Helicobacter cinaedi CCUG 18818] gi|313129993|gb|EFR47610.1| membrane-protein map18 [Helicobacter cinaedi CCUG 18818] Length = 157 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 7/107 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD + L+K L + + + GHTD+ N+ L RA + Sbjct: 53 VLFDFDKYDIRQDMEDGLEKSVAALKSTGAKVVLEGHTDSY---GSDAYNYALGTKRANA 109 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMN--SANRRIDILV 338 L GVS +I +S + + + D NRR++ + Sbjct: 110 VKNALTTRGVSASQIKTVS-YGESKPACTSGDTPECNQENRRVEFKL 155 >gi|126663670|ref|ZP_01734666.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteria bacterium BAL38] gi|126624253|gb|EAZ94945.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteria bacterium BAL38] Length = 625 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 9/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDR 291 F+ + S E L K+ V+ E++ HTD+ N +LS R Sbjct: 516 QPIYFEFNKSNITAEGAAELDKLVAVMNEYPEMVIFAKSHTDSR---GSDSYNMKLSDRR 572 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNSANRRIDILVEDR 341 A S Q L+ G++++RI GF K+A ++ ++ NRR + L+ + Sbjct: 573 AKSTVQYLISKGIAKERI-SGQGFGESEPKVACKSCTEEEHAQNRRSEFLIVKK 625 >gi|242281268|ref|YP_002993397.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] gi|242124162|gb|ACS81858.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] Length = 242 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 69/163 (42%), Gaps = 9/163 (5%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + ++++ R++DL + + + + G+ + + D+ MF Sbjct: 78 ERPWEVLEKQNRIKDLLFPDDVLPPDMDRATLDENLKVLAKPEGVALVLTDKL---MFPL 134 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S ++L ++ VL + ++I G+TD + N+RLS +RA + Sbjct: 135 GKSELDERAKILLYQLVPVLDYLGSADVNIAGYTDN--VGGMRPSNFRLSGERAMAVLTY 192 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 ++ G+ DR+ +S ++ + NRR++IL++ Sbjct: 193 FVEQGIMNDRL-TVSACGPTFPLYSNTTPEGRAQNRRVEILIK 234 >gi|189218838|ref|YP_001939479.1| Outer membrane protein or related peptidoglycan-associated (lipo)protein [Methylacidiphilum infernorum V4] gi|189185696|gb|ACD82881.1| Outer membrane protein or related peptidoglycan-associated (lipo)protein [Methylacidiphilum infernorum V4] Length = 342 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 33/284 (11%), Positives = 72/284 (25%), Gaps = 10/284 (3%) Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 + + + + S P++ + + + Sbjct: 61 KRAELPASIFQARADTQSPSVTPIPALEAPKQIKAINPLVQDVTQANPVRIPMPSVVPGG 120 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + L + Q + + T S S P+ Sbjct: 121 APEVAVLSPTPPTEVSPYQEDPKSHFQTLISHLLTGQTSPGVPNTSNILPAGLGHDPIPG 180 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + +++ + +FD Sbjct: 181 ASAPGQAGTHPTGTSGGEGIPGVDDIQTQFKAAANFDPRVPQPVVLRLPSD---ILFDFD 237 Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ P +L ++ E+L + I GHTD N +LS RA++ Q L Sbjct: 238 SATIKPNAEPLLFQVLEILKKYNRADVEIGGHTDTF---GDEMYNLQLSEQRAFAVQQWL 294 Query: 300 MKSGVSEDRISKISGFAHHRLKIA---SDPMNSANRRIDILVED 340 +G+ + S + NRR++I++ Sbjct: 295 EAHLPQGMYNFHATGYGKSHPIVNPRGSIEEQARNRRVEIVIRA 338 >gi|89056663|ref|YP_512114.1| chemotaxis protein MotB [Jannaschia sp. CCS1] gi|88866212|gb|ABD57089.1| chemotaxis protein MotB [Jannaschia sp. CCS1] Length = 277 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 1/125 (0%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG-KNLMTASKGI 83 ++ G+WK+ YADF+T +MAFF++MW++NAT ++ +K + YF+P ++ Sbjct: 19 GGGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTENQRKGLADYFSPTIPVARISGGGDG 78 Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 + P D S + +G + ++ E N+ + + E Sbjct: 79 AFGGDSPFSEDVLSQDGSGATSLRPTEGRQALGLEGTEHDAEQEEANLTEIEGALMGEGG 138 Query: 144 KNSLT 148 + L+ Sbjct: 139 DSVLS 143 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 81/227 (35%), Gaps = 2/227 (0%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 +T +++ + L + S+ E Sbjct: 51 TTENQRKGLADYFSPTIPVARISGGGDGAFGGDSPFSEDVLSQDGSGATSLRPTEGRQAL 110 Query: 177 PLSKEKILAMKRKKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 L + A + + L ++ + +++D + T G++I + + P Sbjct: 111 GLEGTEHDAEQEEANLTEIEGALMGEGGDSVLSDLARPHIETRLTDEGLVIEVFSRPGQP 170 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +FD + +P P + + ++ +++ H A P W+ + +RA Sbjct: 171 IFDPDTGLPQPWLEELTVSMADLFGTVLNRVAVEAHIAAEPLVRTTESGWQRTTERAQII 230 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +L G++ RI++++G + ++ P+ N RI++++ + Sbjct: 231 RALLEDGGLNAQRIARVTGHSDREPFVS-PPIAPRNDRIEVILLRER 276 >gi|153949846|ref|YP_001401475.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP 31758] gi|152961341|gb|ABS48802.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758] Length = 578 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + +L + I + GHTD A+ N LSL Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVDALMNIRAKPGWLIVVAGHTD---ITGDAQANHILSLK 499 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + L S VS + G+ R +D + NRR++I + Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549 >gi|134292796|ref|YP_001116532.1| hypothetical protein Bcep1808_4087 [Burkholderia vietnamiensis G4] gi|134135953|gb|ABO57067.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4] Length = 214 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 64/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + A++ +++ + L+G +A R ++ I + Sbjct: 42 QLTSKLEEAVRARRQEAQQRASLEQALAGPLAAG----------RVTLVNGRIGISGNVL 91 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S P +L+ + L E++ + G D R DNW LS Sbjct: 92 FALNSDQLQPAGRDLLKTLAGPLAAYLKTRDEILMVSGFADDQQVRAGNRLFADNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +GV + + F + ++ D + NRR++I Sbjct: 152 KRALTVTRALIDAGVPAPSVFAAA-FGSQQPVSSNADDEGRAKNRRVEI 199 >gi|262369640|ref|ZP_06062968.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315708|gb|EEY96747.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 485 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +SS +L + ++ + +V ++ GHTDA+ A N LS +RA + Sbjct: 365 FDTASSTIPDVNKSILDQAAALMQKAPQVKLTVMGHTDAT---GDAAVNKTLSQNRAQAV 421 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340 L+ GV ++ I G+ + + NRRI+ V + Sbjct: 422 VDYLIFKGVDPAQLRAI-GYGQEKPIADNQTDEGKFKNRRIEFEVLN 467 >gi|319424730|gb|ADV52804.1| OmpA/MotB domain protein [Shewanella putrefaciens 200] Length = 480 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 8/111 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S LPE+ VL+ + L + + GHTD + N LS RA + Sbjct: 373 LFDYDSERMLPESKPVLEVLATYLKQNPALSFYVVGHTDD---KGERSYNQSLSERRAAA 429 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342 + L ++ + +++ G + + +D NRR+++++ + Sbjct: 430 VIKQLNEAFNIPSVQLTA-HGNGEYSPVASNANDTGQRLNRRVELVLRSDK 479 >gi|262368251|ref|ZP_06061580.1| inner membrane lipoprotein yiaD [Acinetobacter johnsonii SH046] gi|262315929|gb|EEY96967.1| inner membrane lipoprotein yiaD [Acinetobacter johnsonii SH046] Length = 254 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 8/129 (6%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269 + + I+ + R F+ S++ +L ++ L I Sbjct: 128 LNAQLSVNQAEQQIIDEALKNRIIE-FESGSAVLAVSGTQILDEMAVALNKVGGKKVKII 186 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 GHTD+ N LS +RA + L+ ++ +R+ + G ++ + + Sbjct: 187 GHTDS---SGDVAKNLALSKERAVAVKNYLINKSIAAERL-SVEGLGSNKPVADNATADG 242 Query: 330 A--NRRIDI 336 NRRI+ Sbjct: 243 RKKNRRIEF 251 >gi|332668302|ref|YP_004451090.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332337116|gb|AEE54217.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 1170 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 83/272 (30%), Gaps = 18/272 (6%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + +++ KG F Q + + D + + E Sbjct: 911 ALQAVVSGGKGPFRYQWSDPAGIGPEATAIGAGTYSLTVTDAVGAQKTAQITLTQPEAMS 970 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 L K ++ D K L + L + R Sbjct: 971 IAL-------TKKYGVSEDEVKDGLAAVQVKGGSGTLTYAWSNGETLPTAQKLGLGRNTL 1023 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + AK ++T+ + + + R G I I + FD S I + Sbjct: 1024 VVTDAKGCTATIGVEITKKNIPELTAGRIRNGQAIRIEQLQ----FDVDSINIKSSFIPI 1079 Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L ++ E L + +I + GHT+ RLS RA S + L+K G+ R+ Sbjct: 1080 LDEVFEFLTDNPGIIVEVGGHTNGLCQ---DEFCIRLSTARAKSVAEYLIKKGIDAKRV- 1135 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILVED 340 + G+ + N+R++I + Sbjct: 1136 QFKGYGRSVPIATNSTPEGRQKNQRVEIKIVR 1167 >gi|330811620|ref|YP_004356082.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379728|gb|AEA71078.1| Conserved hypothetical protein, putative lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 244 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 49/149 (32%), Gaps = 10/149 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 L A GV + I + + F S+ L + Sbjct: 86 YADQQEKKLRASMANTGVEVQRQGDQIKLIM---PGNITFATDSANIASSFYQPLNNLAN 142 Query: 258 VLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + I I G+TD++ + N LS RA S L GVS +S G Sbjct: 143 SLKEFNQNQIEIVGYTDST---GSRQHNMDLSQRRAQSVATYLTSQGVSGANLSA-RGAG 198 Query: 317 HHRLKIASDP--MNSANRRIDILVEDRQG 343 ++ + NRR+++ ++ G Sbjct: 199 PDNPVASNADVNGRAQNRRVEVNLKAIPG 227 >gi|24375456|ref|NP_719499.1| OmpA family protein [Shewanella oneidensis MR-1] gi|24350304|gb|AAN56943.1|AE015827_15 OmpA family protein [Shewanella oneidensis MR-1] Length = 228 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N F + VL + Sbjct: 88 YMDVQETKLRQQLASTGVSVTRSGDNIILNM---PNEVTFGVDQTELSDGAKRVLNSVAL 144 Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V +++ G+TD+ N RLS RA LM GV+ R+ G Sbjct: 145 VAKEYSKTQLNVLGYTDS---SGSDSYNLRLSQVRASEVGNYLMSKGVASARVKS-KGMG 200 Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339 + + + NRR++I++ Sbjct: 201 EASPIASNANAEGRAQNRRVEIVLT 225 >gi|152990728|ref|YP_001356450.1| hypothetical protein NIS_0983 [Nitratiruptor sp. SB155-2] gi|151422589|dbj|BAF70093.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 225 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 13/136 (9%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----STEVISIRGH 271 T ++I + + F +S L++I +VL I I G+ Sbjct: 93 QLSITTKYVMIRLFNDIV---FKDTSYQLTDRAKQTLKEIAQVLKKLPKNQKFYIKINGY 149 Query: 272 T---DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDP- 326 DAS D W LS+ RA + LMK G+ R ISG+ R + ++P Sbjct: 150 ATIKDASKLPPDIVDAWDLSIKRAEAVAFYLMKQGIDPSRFF-ISGYGDTRPIYSWNNPL 208 Query: 327 MNSANRRIDILVEDRQ 342 +N N R++I +E Q Sbjct: 209 LNRRNDRVEIYIEVDQ 224 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 23/50 (46%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ W + + D M++L+ FF++++ ++ D YF Sbjct: 3 KKKPEECPSIPGWLVSFGDLMSLLLTFFILLYAMSTVDVTKALKFLSYFQ 52 >gi|325066515|ref|ZP_08125188.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Actinomyces oris K20] Length = 359 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 17/130 (13%) Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276 G +I++ D +FD SS E L + VL S ++GHTD+ Sbjct: 235 PVQSCGTVITLEDS---VLFDFGSSDLRGEASTTLTNLATVLKDSKAPKVQVQGHTDSV- 290 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--------MN 328 + N +LS RA + L +G + D + G+ + ++ Sbjct: 291 --SDDAFNQKLSEQRAQAVSSALKSNGATAD--LEAVGYGETKPVAPNENPDGSDNPGGR 346 Query: 329 SANRRIDILV 338 NRR+++ V Sbjct: 347 RLNRRVEVFV 356 >gi|148259686|ref|YP_001233813.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5] gi|146401367|gb|ABQ29894.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5] Length = 227 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 11/146 (7%) Query: 197 KKISSTLSGLVADNIVKGVLFETT-RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + L GV T + +++ F S+ P +L ++ Sbjct: 81 QHLEAQKQALQRTAQGTGVQVSQTADNRLKLNVPADAG---FATGSATLNPRLYPILDQL 137 Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 G+ L + E + I G+TD++ N+ LS +RA S L+ G+S RI G Sbjct: 138 GQGLQQNPTETVQIIGYTDST---GSNAINYPLSDNRAASVKTYLVSRGISGQRI-ATRG 193 Query: 315 FAHHRLKIASDPM--NSANRRIDILV 338 ++ +ANRR+DI V Sbjct: 194 MGPQDPVASNATAAGRAANRRVDIYV 219 >gi|260426127|ref|ZP_05780106.1| OmpA domain protein [Citreicella sp. SE45] gi|260420619|gb|EEX13870.1| OmpA domain protein [Citreicella sp. SE45] Length = 649 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 85/302 (28%), Gaps = 13/302 (4%) Query: 49 LVMWIINATDDDTKKAIEQYFN---PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH 105 + + T+ + P L I + N + Sbjct: 308 VALLAPEGTEQGLFDRVVGELESALPEVFALKAVLPEIPEASNQGPPEFTATLSPEGSVQ 367 Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + T R ++ Y + + N R + L + ++ Sbjct: 368 LRGRVHSEIARQTADSFARARFGSDAVYTAARVDPDLPANWSARVLAGLEALGELSNGVV 427 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI- 224 + + A L + ++ L + + + T Sbjct: 428 RVTPDMVTVSGNTGSTDANAEISGLLADKLGQGAEFEINVLYQEKLDPTLGIPTPDECEA 487 Query: 225 -LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 ++ I+ R F+ S+ V+ I E+L + + I+GHTD+ Sbjct: 488 QIVEIVGDRKIN-FEPGSANLDASAKDVMDDIAELLKLCGDIPLEIQGHTDSQ---GRES 543 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 N +LS DRA + L V ++ G+ + + NRRI+ + Sbjct: 544 MNQQLSQDRAQAVLDALRNRRVLTAS-YRVRGYGEEQPIADNKTEEGREANRRIEFRLIR 602 Query: 341 RQ 342 + Sbjct: 603 PE 604 >gi|189461399|ref|ZP_03010184.1| hypothetical protein BACCOP_02054 [Bacteroides coprocola DSM 17136] gi|189431928|gb|EDV00913.1| hypothetical protein BACCOP_02054 [Bacteroides coprocola DSM 17136] Length = 239 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 8/154 (5%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + SSS+ + + Sbjct: 74 KKMDKAAEQAAQIQGAEVEQVTDNNGLQAVKVTFDSGILFSTSSSSLSTSAKSSLSKFAN 133 Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRIS 310 VL + ++ I G+TD + ++N + N LS RA S L+ GVS +I Sbjct: 134 NVLNQNRDMDVAIYGYTDNTGWKNSTAEQSVQKNQELSQARAQSVSSYLLGCGVSASQIK 193 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G + NRR+++ + Q Sbjct: 194 TVEGMGESNPVADNSTEAGRKENRRVEVYMYASQ 227 >gi|270285686|ref|ZP_06195080.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum Nigg] gi|270289694|ref|ZP_06195996.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum Weiss] gi|301337081|ref|ZP_07225283.1| peptidoglycan-associated lipoprotein [Chlamydia muridarum MopnTet14] Length = 188 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETI-VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S E +L + L S + I GHTD A N L RA + Sbjct: 84 FATDSYSIKGEDNLTILASLVRHLRKSPKTTLYIEGHTDER---GAAAYNLALGARRANA 140 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 Q L+K G++ DR+ IS + + ++ NRR + + R Sbjct: 141 VKQYLIKQGIASDRLFTIS-YGKEHPVHSGHNELAWQQNRRTEFKIHAR 188 >gi|241767706|ref|ZP_04765331.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN] gi|241361321|gb|EER57865.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN] Length = 219 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 65/210 (30%), Gaps = 21/210 (10%) Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + E + + G + I L ++++++ + Sbjct: 5 DDALDEGAGQTAPVWAVFGDLMAGLLGAFVLILVGVLVVQIDLVASLKQEVEKRQQEEQR 64 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL--- 252 + L+ +A I IS + +F S PE +L Sbjct: 65 RMALEKALAIPLASG-----RVTVHNGRIGIS-----GSVLFATGSDELRPEGRQLLKSL 114 Query: 253 -QKIGEVLAHSTEVISIRGHTDA----SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + L E++ + G TD DN LS RA + + L+ G+ Sbjct: 115 VPPLQVYLRERDEMLMVSGFTDNTTLLRGPHQRFADNLELSAQRALTVARALIDEGMPSS 174 Query: 308 RISKISGFAHHRLKIAS--DPMNSANRRID 335 ++ + F + + + + NRR++ Sbjct: 175 QVFAAA-FGAEQPVADNADEKGRAQNRRVE 203 >gi|84683658|ref|ZP_01011561.1| flagellar motor protein [Maritimibacter alkaliphilus HTCC2654] gi|84668401|gb|EAQ14868.1| flagellar motor protein [Rhodobacterales bacterium HTCC2654] Length = 617 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 77/220 (35%), Gaps = 16/220 (7%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + + + G L + + + L++E+ + ++ + Sbjct: 399 DEAEAREEEAQVQVEALGSRLNSALAQVAAEQRALAASQAALAEEERARAELERAEAERL 458 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQK 254 + ++ L ++ + R GI I + +F + + + Sbjct: 459 RAEAADLENYRSEFFGRLRQVLGDRDGIRIEGDRFVFSSEVLFPVGGADLSAAGRQQIAR 518 Query: 255 IGEVLAHS--------TEVISIRGHTDASPFRNIARD--NWRLSLDRAYSAYQVLMKS-G 303 + L ++ + GHTD+ PFR A NW LS RA S + + G Sbjct: 519 VAGTLRDVASEIPPEINWILRVDGHTDSQPFRGNAEYADNWELSQARALSVVRYMQDQLG 578 Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 DR+ GF + D +ANRRI++ + ++ Sbjct: 579 FPPDRLVAA-GFGEWQPIAEGDSDEALAANRRIELKLTEK 617 >gi|319900153|ref|YP_004159881.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] gi|319415184|gb|ADV42295.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] Length = 419 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ PE++ + +I +++ + S+ GHTD++ A N LS R+ S Sbjct: 318 FDVGKSVIKPESMGEINRIVQLMTENPTLKFSVEGHTDST---GNATSNQTLSEARSKSI 374 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 L++ G++ DR++ SG + D + NRR++ + Sbjct: 375 VDKLVEMGIAADRLTS-SGKGQTTPIADNATDEGRAKNRRVEFV 417 >gi|2251192|emb|CAA90573.1| outer membrane protein [Pseudomonas aeruginosa] gi|162319694|gb|ABX84373.1| OprL [Pseudomonas aeruginosa] Length = 168 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L S + + + GHTD N L RA + Sbjct: 69 FEYDSSDLKPEAMRALDVHAKDLKGSGQRVVLEGHTDER---GTREYNMALGERRAKAVQ 125 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS + +S + R + NRR+++ Sbjct: 126 RYLVLQGVSPATLELVS-YGKERPVATGHDEQSWAQNRRVEL 166 >gi|304312414|ref|YP_003812012.1| Predicted OmpA family protein [gamma proteobacterium HdN1] gi|301798147|emb|CBL46369.1| Predicted OmpA family protein [gamma proteobacterium HdN1] Length = 244 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L E +++ L + + L+ +A R I IS + + Sbjct: 46 TLQTEITKRQAEEQQRVALEEALEIALADPLASG-----RITLDRGRIGIS-----GSVL 95 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPFRN---IARDNWRLSL 289 F +S+ PE + +L+++ L E + G TD P + DNW LS Sbjct: 96 FALNSAELQPEGLALLREVSAPLRKYLEQRQELLMVSGFTDDLPIQKGNHSFTDNWALSA 155 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336 +RA + + L+ +G+ + + F + ++ + NRR++I Sbjct: 156 ERALTVTRALIDNGLPSTLVFAAA-FGAEQPIASNSDAEGRAKNRRVEI 203 >gi|117919117|ref|YP_868309.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3] gi|117611449|gb|ABK46903.1| OmpA/MotB domain protein [Shewanella sp. ANA-3] Length = 230 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N F + VL + Sbjct: 89 YMDVQETKLRQQLASTGVSVTRDGDNIVLNM---PNEVTFGVDQTELSDGAKRVLNSVAL 145 Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V +++ G+TD+ N RLS RA LM GV+ R+ G Sbjct: 146 VAKEYSKTQLNVLGYTDS---SGSDSYNLRLSQVRASEVGNYLMSKGVASARVKS-KGMG 201 Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339 + + + NRR++I++ Sbjct: 202 EASPIASNANAAGRAQNRRVEIVLT 226 >gi|114561780|ref|YP_749293.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114333073|gb|ABI70455.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400] Length = 479 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 8/146 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + +N G+ + I + + +F S LPE +++ + + L Sbjct: 337 RIIEETTLNNNRVGIDLQGLTDEIAKTGHVALDGLLFKYDSDELLPEAYPIVEVVAQYLQ 396 Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHH 318 + + GH+D N LS RA + L+K +S ++ G + Sbjct: 397 THPKQLFYVVGHSDDQ---GSQAYNQTLSEKRATAIKTRLIKQFSISAQQVEA-KGVGEY 452 Query: 319 RLKIASDPMNS--ANRRIDILVEDRQ 342 + NRR+++++ Sbjct: 453 SPIANNLDEAGQKQNRRVELVIRSDN 478 >gi|256421238|ref|YP_003121891.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] gi|256036146|gb|ACU59690.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] Length = 594 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 13/119 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 +D + S P + L ++ +L ++ I + HTD+ + N +LS R Sbjct: 480 ENVYYDFNESYLQPASFPSLDRLVAMLKKYPKIVIELSAHTDS---KGSNDLNEKLSDAR 536 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVEDRQ 342 A S L+ G+ R+ G+A + + NRR + + R+ Sbjct: 537 AKSCVDYLVSQGIESTRLQA-KGYAASHPVAPNTNKDGSDNPEGRARNRRTEFKILSRE 594 >gi|238752234|ref|ZP_04613714.1| Outer membrane protein and peptidoglycan-associated (lipo)protein [Yersinia rohdei ATCC 43380] gi|238709502|gb|EEQ01740.1| Outer membrane protein and peptidoglycan-associated (lipo)protein [Yersinia rohdei ATCC 43380] Length = 153 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +FD ++ IG L + + + GHTD++ N +LS R Sbjct: 47 NKVLFDTDIRELNSTGKQTVESIGRALHNVGINHLRVDGHTDST---GEDGYNQQLSYQR 103 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 A + L SG+ RI + G + + NRR+ I+V Sbjct: 104 AAAVADSLSASGIPRARID-VRGRGELEPAADNKTAQGRAENRRVAIIVTA 153 >gi|89055277|ref|YP_510728.1| OmpA/MotB [Jannaschia sp. CCS1] gi|88864826|gb|ABD55703.1| OmpA/MotB [Jannaschia sp. CCS1] Length = 481 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 7/106 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S+ + + ++ + + + GHTDA N LS +RA + Sbjct: 377 LFDFDSATLRRAGLQAVSELAAAIRSGQVSQVIVDGHTDA---AGSDAYNQTLSQERAVA 433 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 Q LM GV++ + F R + NRR+++L+ Sbjct: 434 VAQALMVQGVAQG-LLTTRAFGESRPVADNGSEAGAQQNRRVEVLL 478 >gi|51597552|ref|YP_071743.1| PAL/OmpA family membrane protein [Yersinia pseudotuberculosis IP 32953] gi|186896682|ref|YP_001873794.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis PB1/+] gi|51590834|emb|CAH22486.1| Putative PAL/OmpA-family membrane protein [Yersinia pseudotuberculosis IP 32953] gi|186699708|gb|ACC90337.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+] Length = 578 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + +L + I + GHTD A+ N LSL Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + L S VS + G+ R +D + NRR++I + Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549 >gi|22126581|ref|NP_670004.1| hypothetical protein y2702 [Yersinia pestis KIM 10] gi|22127241|ref|NP_670664.1| hypothetical protein y3365 [Yersinia pestis KIM 10] gi|45443207|ref|NP_994746.1| OmpA family membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|108806286|ref|YP_650202.1| OmpA family membrane protein [Yersinia pestis Antiqua] gi|108812671|ref|YP_648438.1| OmpA-family membrane protein [Yersinia pestis Nepal516] gi|145597850|ref|YP_001161926.1| OmpA-family membrane protein [Yersinia pestis Pestoides F] gi|149367019|ref|ZP_01889052.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125] gi|218928146|ref|YP_002346021.1| putative OmpA family membrane protein [Yersinia pestis CO92] gi|229840896|ref|ZP_04461055.1| putative OmpA-family membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842543|ref|ZP_04462698.1| putative OmpA-family membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229903796|ref|ZP_04518909.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516] gi|270486867|ref|ZP_06203941.1| OmpA family protein [Yersinia pestis KIM D27] gi|270487580|ref|ZP_06204654.1| OmpA family protein [Yersinia pestis KIM D27] gi|294502870|ref|YP_003566932.1| putative OmpA-family membrane protein [Yersinia pestis Z176003] gi|21959587|gb|AAM86255.1|AE013873_3 hypothetical [Yersinia pestis KIM 10] gi|21960312|gb|AAM86915.1|AE013938_3 hypothetical [Yersinia pestis KIM 10] gi|45438075|gb|AAS63623.1| putative OmpA-family membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|108776319|gb|ABG18838.1| OmpA-family membrane protein [Yersinia pestis Nepal516] gi|108778199|gb|ABG12257.1| putative OmpA-family membrane protein [Yersinia pestis Antiqua] gi|115346757|emb|CAL19641.1| putative OmpA-family membrane protein [Yersinia pestis CO92] gi|145209546|gb|ABP38953.1| OmpA-family membrane protein [Yersinia pestis Pestoides F] gi|149290633|gb|EDM40709.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125] gi|229679566|gb|EEO75669.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516] gi|229690853|gb|EEO82907.1| putative OmpA-family membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229697262|gb|EEO87309.1| putative OmpA-family membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|262361491|gb|ACY58212.1| putative OmpA-family membrane protein [Yersinia pestis D106004] gi|262365418|gb|ACY61975.1| putative OmpA-family membrane protein [Yersinia pestis D182038] gi|270335371|gb|EFA46148.1| OmpA family protein [Yersinia pestis KIM D27] gi|270336084|gb|EFA46861.1| OmpA family protein [Yersinia pestis KIM D27] gi|294353329|gb|ADE63670.1| putative OmpA-family membrane protein [Yersinia pestis Z176003] gi|320013943|gb|ADV97514.1| putative OmpA-family membrane protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 578 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + +L + I + GHTD A+ N LSL Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + L S VS + G+ R +D + NRR++I + Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549 >gi|50083884|ref|YP_045394.1| putative lipoprotein [Acinetobacter sp. ADP1] gi|49529860|emb|CAG67572.1| putative lipoprotein precursor [Acinetobacter sp. ADP1] Length = 159 Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 +F+ S P + ++ L + + G+TD N +LS Sbjct: 52 PERLLFEFDKSEVNPAHQQEIIRLANQLNKYGLHKLKVVGYTDNI---GNRDYNLKLSQA 108 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA S + + + + + I +I G ++ + + +ANRR+ I++ Sbjct: 109 RAQSVAAIFINNSFTPNHI-QIIGRGSNQPLLPNTTEENRAANRRVAIVI 157 >gi|237716264|ref|ZP_04546745.1| outer membrane protein [Bacteroides sp. D1] gi|294807688|ref|ZP_06766481.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b] gi|229443911|gb|EEO49702.1| outer membrane protein [Bacteroides sp. D1] gi|294445124|gb|EFG13798.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b] Length = 238 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + + +F ++ L K Sbjct: 74 KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 132 Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + +SI G+TD ++N N LS +RA S L+ GVS ++I Sbjct: 133 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 192 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G ++D NRR+++ + + Sbjct: 193 KSVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 227 >gi|94314001|ref|YP_587210.1| hypothetical protein Rmet_5082 [Cupriavidus metallidurans CH34] gi|93357853|gb|ABF11941.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 217 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 10/161 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 M+ RL++ K+ L R + I +F +S Sbjct: 41 QMELSARLENEVKQRQEELKRRQTLEEALAGPLAAGRVTLKDGRIGISGNVLFALNSDQL 100 Query: 245 LPETIVVLQKIGEVLAHSTE----VISIRGHTDASPFRN---IARDNWRLSLDRAYSAYQ 297 PE +L+ + L+ ++ + G TD R DN LS RA + + Sbjct: 101 QPEGRALLKSLAAPLSAYLGARDEILMVSGFTDDQQVREGNRRFADNLELSAQRALTVTR 160 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 L+++G+ I + F + ++ + NRR++I Sbjct: 161 ALIEAGLPPASIFSAA-FGSQQPVASNATEESRAKNRRVEI 200 >gi|94500908|ref|ZP_01307434.1| hypothetical protein RED65_11730 [Oceanobacter sp. RED65] gi|94427027|gb|EAT12009.1| hypothetical protein RED65_11730 [Oceanobacter sp. RED65] Length = 2033 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 95/286 (33%), Gaps = 13/286 (4%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 F L SKG ++ + D S + I + + +L++ Sbjct: 672 TDFVVKLKPPSKGQVTQRLSSRIEPVTERDKSNAKDIALALNQKIVYRVDLTGTGVKLKD 731 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + S T D + K + + + E + + Sbjct: 732 LRSLIMLPPGVSYKTGSATLDGNTIQAPKKYDEQTLLFSLNDPGEDWGHLLEFEAWITEQ 791 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLP 246 + +L+ + + N V + ++ + P F S Sbjct: 792 AKAGELSTRSVAMFDSPSEANQRTPVAITSALLSLVPENKEVHKPEEAPKFSSFSRDLSQ 851 Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVLMK 301 I ++ + E L + I + GHTD P +N+ LSL RA SA LM+ Sbjct: 852 ADINAMKSVLEQLRGLEDLRIEVAGHTDNVPIAKRSRHIFNNNYELSLARARSAADYLMR 911 Query: 302 S-GVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI-LVEDRQG 343 + +++ ISG+ R ++ + NRR+++ ++ R G Sbjct: 912 ELELGPEQV-TISGYGSQRPVTNNGNEQSRALNRRVEVNILAARDG 956 >gi|254524607|ref|ZP_05136662.1| hypothetical protein SSKA14_3746 [Stenotrophomonas sp. SKA14] gi|219722198|gb|EED40723.1| hypothetical protein SSKA14_3746 [Stenotrophomonas sp. SKA14] Length = 250 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ P + +L ++ +A + I GHTD N LS RA + Sbjct: 149 FQSGSARLTPFGMSILDEMVAKMAQMPDSRFLIIGHTDNV---GQRESNLTLSHARALAV 205 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 +M G+ + + G + + + NRRI+ ++ Sbjct: 206 KNYMMSKGIPGSHMD-VLGKGPDEPVADNTSNDGRARNRRIEFKIQ 250 >gi|298368928|ref|ZP_06980246.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282931|gb|EFI24418.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314] Length = 216 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 71/205 (34%), Gaps = 15/205 (7%) Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 + E +++ ++ S + P++ A +S+ + Sbjct: 14 GQKPDEPAAQQQQASPVQASTTETPQTQPEPVAPSAPAHATTPAPASAPATAQNSSAAAQ 73 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEV 265 + + T TG I I + +FD + PE LQK +++ + Sbjct: 74 GSSLTAQSSSLSGTETGFNIQIN-LSSDVLFDFDKAELKPEADRELQKAADIIRQKGKGL 132 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 I I G+TD+ + N RLSL RA + G+ ++ + G + Sbjct: 133 ILISGYTDS---KGTDAYNKRLSLVRAQAVKNWFEAQGLHQN--YQTEGLGAANPVAPNT 187 Query: 326 --------PMNSANRRIDILVEDRQ 342 + NRR++I+V + Sbjct: 188 NDDGSDNPEGRAKNRRVEIIVNKTK 212 >gi|146344294|ref|YP_001202150.1| hypothetical protein pQBR0404 [Pseudomonas fluorescens SBW25] gi|146188106|emb|CAM96436.1| hypothetical protein pQBR0404 [Pseudomonas fluorescens SBW25] Length = 220 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 9/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S+ L + + TG + I+ F +S+ P L I L Sbjct: 80 SAKLKEELRQKGMDATTSLDPVTGRQMMTIEAPADIAFATASADLQPAAFQGLSAIATAL 139 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + I GHTD + + N LS RA + Q L +GV ++ + G Sbjct: 140 KDQKDLRLEITGHTDGT---GSRQFNNVLSYARAQAVAQYLYAAGVPA-QVIAVRGVGPS 195 Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343 + NRR++I + +QG Sbjct: 196 MPVATDATTQGRAQNRRVEIQI--KQG 220 >gi|145301089|ref|YP_001143930.1| outer membrane lipoprotein [Aeromonas salmonicida subsp. salmonicida A449] gi|142853861|gb|ABO92182.1| outer membrane lipoprotein [Aeromonas salmonicida subsp. salmonicida A449] Length = 218 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV +++++ N FD SS+ L + Sbjct: 78 YMDVQEAKLREKLQGTGVSVTRNGDELILNM---PNNVTFDSSSAQLKAAGANTLSGVAM 134 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V+A +++ GHTD++ N +LS RA + L+ GV+ RIS G Sbjct: 135 VVAEFDKTRLNVVGHTDST---GSRDLNMKLSAQRADAVAAQLIGHGVTGSRIST-QGVG 190 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 + + + NRR+ I + Sbjct: 191 PDQPVATNSTAAGKAQNRRVTITL 214 >gi|325297821|ref|YP_004257738.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324317374|gb|ADY35265.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170] Length = 239 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 10/155 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + +F SSS L K Sbjct: 74 KKMDKAAEQAAQIEGAEVEQVTDNNGLQAVKVTFDSG-ILFATSSSDLSTSAKSALSKFA 132 Query: 257 EV--LAHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + ++I G+TD + ++N + N LS RA S L + G + +I Sbjct: 133 NNVLIQNPDMDVAIYGYTDNTGWKNSTAEQSVQKNLELSQSRAQSVSNYLRECGTTTSQI 192 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G + NRR+++ + Q Sbjct: 193 KTVEGLGESNPVADNSTEAGRQENRRVEVYMYASQ 227 >gi|123440951|ref|YP_001004940.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087912|emb|CAL10700.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 169 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +FD + +Q IG L + + + GHTDA N +LS R Sbjct: 62 NKVLFDSDVRKLNASGVQTVQNIGRALHNVGINHMRVDGHTDAI---GEDGYNQQLSFQR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A + L G+ I ++ G + + NRR+ I+V Sbjct: 119 ASAVADTLAAIGIPRTNI-EVRGRGKLEPVADNRTAKGRAENRRVAIIVTAP 169 >gi|160876689|ref|YP_001556005.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195] gi|160862211|gb|ABX50745.1| OmpA/MotB domain protein [Shewanella baltica OS195] gi|315268889|gb|ADT95742.1| OmpA/MotB domain protein [Shewanella baltica OS678] Length = 485 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 8/111 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S LPE+ VL + L + GHTD + N LS RA + Sbjct: 378 LFDYDSERMLPESKPVLDVLASYLKQHPALSFYVVGHTDD---KGERSYNQSLSERRAAA 434 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + L + +++ G + ++ NRR+++++ + Sbjct: 435 VIKQLSDGFQIPSAQLTA-HGNGEYSPVASNTNDAGQKLNRRVELVLRSDK 484 >gi|83717671|ref|YP_439345.1| hypothetical protein BTH_II1148 [Burkholderia thailandensis E264] gi|167577759|ref|ZP_02370633.1| hypothetical protein BthaT_06461 [Burkholderia thailandensis TXDOH] gi|167615886|ref|ZP_02384521.1| hypothetical protein BthaB_06301 [Burkholderia thailandensis Bt4] gi|257142466|ref|ZP_05590728.1| hypothetical protein BthaA_25103 [Burkholderia thailandensis E264] gi|83651496|gb|ABC35560.1| ompA family protein [Burkholderia thailandensis E264] Length = 215 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +++++ K + L+G +A R ++ I + + Sbjct: 43 ELSSKLDAEVRQRQWESQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGSVL 92 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S P +L+ + LA E++ + G D R DNW LS Sbjct: 93 FALNSDELQPAGRDLLKSLAGPLAAYLDANHEILMVSGFADDLQVRAGNRRFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + + GV + + F + + D + NRR++I Sbjct: 153 KRALTVTRAFIDEGVPASSVFAAA-FGSEQPVSPNSDDAGRAKNRRVEI 200 >gi|71282150|ref|YP_271418.1| ompA family protein [Colwellia psychrerythraea 34H] gi|71147890|gb|AAZ28363.1| ompA family protein [Colwellia psychrerythraea 34H] Length = 367 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + ++ + ++ K+ + + + ++I+GH+ A + A N LS RA + Sbjct: 256 FDSNKAVVKEKYKPIMVKVAKFMEAYPDLSLTIKGHSSA---KGSAAYNQTLSAKRAQAV 312 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 VL+ GV R++ I G+ L + + NRRI+ + Sbjct: 313 VDVLINDFGVDASRLNSI-GYGESELLNTDNTAAAHEQNRRIEATISTTN 361 >gi|119383378|ref|YP_914434.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans PD1222] gi|119373145|gb|ABL68738.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222] Length = 768 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 86/300 (28%), Gaps = 15/300 (5%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + ++ + + + P + + S Sbjct: 325 VALFAPADVEAAQFDEAVGRLEAAL----PPAFTLAARHEKPGEAEAGPAEFSALVDPGG 380 Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT---RDSEKGKDLCKSTDLEK 165 S+ +I + + L F +S R + L E Sbjct: 381 VSLRGRITDERMRDAVESLARARFGQVDSALRSDVSVPEGWTLRAIAALEALDGLARGEA 440 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI- 224 + ++ + M + Q L L+ + + + + Sbjct: 441 KVTRDLVRISGVSGSQTASDMAAARLAQRLGAGARYELAIRYDRRMDPLLGLPSGIECVD 500 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARD 283 ++ Q++ F+ + S+ + L+++ E + + I GHTD+ Sbjct: 501 RLNAAMQQSEIGFEPNKSVIAGDPGPTLERLAETMKLCADFRIEIGGHTDSQ---GSEGF 557 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 N LS RA + + +G+ ++ G+ + +D NRRI+ L+ Sbjct: 558 NAELSRARAQAVLAAMTAAGIDTANMTA-KGYGESQPIADNDTDAGREANRRIEFLLLAD 616 >gi|83949579|ref|ZP_00958312.1| OmpA family protein [Roseovarius nubinhibens ISM] gi|83837478|gb|EAP76774.1| OmpA family protein [Roseovarius nubinhibens ISM] Length = 171 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +F S+ P LQ+ + I GHTD+ N LSL RA S Sbjct: 73 LFATDSANISPSGRARLQQFFRDANAVS--YIITGHTDSR---ASDAYNMNLSLRRANSV 127 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 +V +++G RI+ + G+ K ++ ANRR++I+ Sbjct: 128 ARVAVQTG---ARIADVRGYGERMPKASNATAAGMQANRRVEII 168 >gi|38422322|emb|CAE45324.1| unnamed protein product [Magnetospirillum gryphiswaldense] gi|144897900|emb|CAM74764.1| Outer membrane protein and related peptidoglycan-associated (lipo) [Magnetospirillum gryphiswaldense MSR-1] Length = 163 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 I + + FD + L K L +I GH D N Sbjct: 52 IANVGDRVFFDFDKYALRADAKGSLDKQAAWLKKYPTYSLTIEGHADER---GTREYNLA 108 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 L RA S + L+ +GV R+ IS + R +++ S NRR Sbjct: 109 LGERRANSVKEYLVGAGVPAARVKTIS-YGKERPVALGSNEAAWSQNRR 156 >gi|237806321|ref|ZP_04593025.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027434|gb|EGI07489.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6] Length = 194 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV + I + + F SS L + L Sbjct: 52 DKQEAALRESMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 108 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L GV + + + G Sbjct: 109 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQTHL-SVRGAGPD 164 Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR+++ ++ G Sbjct: 165 QPIASNADVNGRAQNRRVEVNLKPIPG 191 >gi|90022173|ref|YP_528000.1| peptidoglycan-associated lipoprotein [Saccharophagus degradans 2-40] gi|89951773|gb|ABD81788.1| OmpA/MotB [Saccharophagus degradans 2-40] Length = 163 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 ++I FD ++ E L +V+ + I + GH D N Sbjct: 52 RDALIGVDTVFYFDFDQAMLRSEARAALLIHAKVIKETNASIRLEGHADER---GSREYN 108 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDI 336 L RA + L+ GV I +S + R +++ S NRR++I Sbjct: 109 MALGERRANAVRDFLVLQGVPSYSIETVS-YGEERAAQVGSNESAWSKNRRVEI 161 >gi|77747768|ref|NP_636149.2| hypothetical protein XCC0758 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761295|ref|YP_244539.2| hypothetical protein XC_3475 [Xanthomonas campestris pv. campestris str. 8004] Length = 403 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 16/123 (13%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD 283 +I++ D+ +FD + P+ VL + L + + +RGHTDA + Sbjct: 288 VITLSDR---ILFDFDKADIRPDAARVLDTLAAALGKVSVAQMEVRGHTDA---KGGDDY 341 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------DP-MNSANRRIDI 336 N LS RA + L G ++ + G+ + + +P NRR+++ Sbjct: 342 NQALSERRANAVLAALRTRGTAQS--ASAKGYGESQPLAPNTVKGQDNPGGRQLNRRVEL 399 Query: 337 LVE 339 + Sbjct: 400 FLR 402 >gi|320353100|ref|YP_004194439.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320121602|gb|ADW17148.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032] Length = 1326 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 35/281 (12%), Positives = 88/281 (31%), Gaps = 10/281 (3%) Query: 59 DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118 + + A + + + ++Q + + + + L+ Sbjct: 1048 AEQRAAKAEATVQQLSASQSENSRKVKALEDQLAAAQKQAQQDLVPTLNQQIATLRDQLA 1107 Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178 + +++ ++ + + +S+ +D + T + + + E P Sbjct: 1108 QMEAASAQMKKSLTENAQAAESKTQALQAEKDGLQQSLTASQTTIAELRKQLEQLKAQPQ 1167 Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + D K + + L + + I+ N F Sbjct: 1168 PEAVAPLTAATPAADDQDKDGVADAADLCPGSPAGSPVNGLGCPAGKGIILQGVN---FA 1224 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 +++ E+ L + LAH ++ + G+TD+ + N LS RA S Sbjct: 1225 SGTAVFTQESRKNLDTVAAALAHVPQMRVEVAGYTDS---AGDPKKNLDLSAQRAQSVVD 1281 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 L GV+ +++ G+ + NRR+++ Sbjct: 1282 YLQTKGVARAQLTA-KGYGKENPIADNATAAGKQKNRRVEL 1321 >gi|332283816|ref|YP_004415727.1| OmpA/MotB domain protein [Pusillimonas sp. T7-7] gi|330427769|gb|AEC19103.1| OmpA/MotB domain protein [Pusillimonas sp. T7-7] Length = 223 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 10/161 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 ++ +L++ ++ ++ I + +F +S+ Sbjct: 41 QLELSAKLEEEVLHRQEETQRRISLEQALARPLAEGSVTLIDGRIGISGSVLFALNSAQL 100 Query: 245 LPETIVVLQKIGEVLAHS----TEVISIRGHTDASPF---RNIARDNWRLSLDRAYSAYQ 297 E VL+ + L+ +++ + G TD DNW LS RA + + Sbjct: 101 QAEGHDVLESLVAPLSDYLQSHDQILMVSGFTDDQQVLQGNRRFDDNWDLSAQRALTVTR 160 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 L+ +G+ + + F + ++ + + NRR++I Sbjct: 161 ALIAAGIPSSSVFAAA-FGAEQPVASNADEQGRAKNRRVEI 200 >gi|326388398|ref|ZP_08209994.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370] gi|326207130|gb|EGD57951.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370] Length = 172 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ E+ +LQ + LA +I GH D N L RA +A Sbjct: 70 FELDKYNVDTESQGILQSQAQWLAKYPGKKITIEGHCDER---GTREYNLALGERRANAA 126 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILVE 339 L+ GV RI+ +S + R + + + NRR + I VE Sbjct: 127 KTYLVGLGVDASRINTVS-YGKERPIALGSDEASWAKNRRAVTITVE 172 >gi|170023051|ref|YP_001719556.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis YPIII] gi|169749585|gb|ACA67103.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII] Length = 578 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + +L + I + GHTD A+ N LSL Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + L S VS + G+ R +D + NRR++I + Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549 >gi|126729072|ref|ZP_01744886.1| OmpA/MotB [Sagittula stellata E-37] gi|126710062|gb|EBA09114.1| OmpA/MotB [Sagittula stellata E-37] Length = 297 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 6/109 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290 +F SS +P+ L ++ +A + + GHTDA+ N LS + Sbjct: 190 DGAVLFAHDSSDLMPDAKAALDELAAQIADANLSAFRVVGHTDAT---GSDAYNLTLSQE 246 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 RA + V + G +++ NRR++I+ Sbjct: 247 RAAAVRDYYASMDVLTNVSISSEGRGESNPLASNETEEGREQNRRVEII 295 >gi|319406244|emb|CBI79881.1| Outer membrane lipoprotein omp16 [Bartonella sp. AR 15-3] Length = 168 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 7/113 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + F SS + +L + E L +I GH D N L R Sbjct: 58 DRIFFSLDSSSIESDAEYILARQAEWLLRYPHYFITIEGHADER---GTREYNLALGQRR 114 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342 A + L+ GVS R++ +S + R + + NRR ++V + + Sbjct: 115 AVAVRDYLISLGVSSQRMNTVS-YGKERPVAICDNISCWNQNRRAVLVVNNTR 166 >gi|285019096|ref|YP_003376807.1| outer membrane protein [Xanthomonas albilineans GPE PC73] gi|283474314|emb|CBA16815.1| hypothetical outer membrane protein [Xanthomonas albilineans] Length = 216 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 10/154 (6%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L ++ + V T R ++ I R +F +S P+ Sbjct: 47 KLDAQMRQQQREAQQRKTLELALAVPLATGRVTLIDGRIGIRGNVLFALNSDQLQPQGRD 106 Query: 251 VLQ----KIGEVLAHSTEVISIRGHTDASPFRNIAR---DNWRLSLDRAYSAYQVLMKSG 303 +L + L E++ + G TD R R DNW LS +RA + + L+ +G Sbjct: 107 LLDSLATPLAGYLKARNEILMVSGFTDDRQVRVGNRQFVDNWELSAERALTVTRALIDAG 166 Query: 304 VSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335 V D I + F + ++ D ++NRR++ Sbjct: 167 VPADAIFAAA-FGAQQPVASNADDAGRASNRRVE 199 >gi|162451106|ref|YP_001613473.1| hypothetical protein sce2834 [Sorangium cellulosum 'So ce 56'] gi|161161688|emb|CAN92993.1| putative membrane protein [Sorangium cellulosum 'So ce 56'] Length = 634 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 39/258 (15%), Positives = 76/258 (29%), Gaps = 8/258 (3%) Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 P R + +N ++ + L Sbjct: 381 PGARDACPYAHGPASADAKRNGCPVEDEDEDGVADQDDLCPRAAAGPGGGDPSRRGCPAD 440 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 +D + D + EK + + L D A Sbjct: 441 QDGDGLPDALDACPAEKGDAAGGATRPGCPPAPRQPTDQDGDGLPDDADACPREKGPASG 500 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI 268 D G G I +++ + + P++ VL ++ +V+ E + I Sbjct: 501 DARASGCPTRVRVQGEQIVLLEPVVFRVLKNDPAPIDPKSEAVLAEVRDVIEQHPEWVKI 560 Query: 269 R--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 HTD AR N L+ RA + + L+ G++ +R+ G+ + Sbjct: 561 EVSAHTD---GAGNARFNETLTTARAEAVRRWLVGKGIAAERLVA-KGYGASQPISDDRS 616 Query: 327 MNSA--NRRIDILVEDRQ 342 NRR+ +LV +++ Sbjct: 617 AAGREKNRRVQLLVLEKR 634 >gi|299145363|ref|ZP_07038431.1| lipoprotein PG3 [Bacteroides sp. 3_1_23] gi|298515854|gb|EFI39735.1| lipoprotein PG3 [Bacteroides sp. 3_1_23] Length = 238 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + + +F ++ L K Sbjct: 74 KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 132 Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + +SI G+TD ++N N LS +RA S L+ GVS ++I Sbjct: 133 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 192 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G ++D NRR+++ + + Sbjct: 193 KSVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 227 >gi|291336865|gb|ADD96397.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C206] Length = 189 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 8/154 (5%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--------FGKNLM 77 P +W +AD T+LMAFF+++ + K I Sbjct: 19 PPAGAPAWMATFADMATLLMAFFVLILSFAEFNVPKFKQISGSLREAFGVQKVVPVVEQP 78 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + I E +P + + ++L+ + + + + N + Sbjct: 79 KGTTVISLEFSPSPTPAITDTLRQQTTELQAPELELQTKTEDSPDGSETDKQNKSDFAGE 138 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + T +++ K + ++ + E Sbjct: 139 GGEGADQLDATELAKQLKKAIDTGEVTVEMLGEN 172 >gi|153946939|ref|YP_001399719.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP 31758] gi|152958434|gb|ABS45895.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758] Length = 578 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + +L + I + GHTD A+ N LSL Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + L S VS + G+ R +D + NRR++I + Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549 >gi|45441186|ref|NP_992725.1| hypothetical protein YP_1360 [Yersinia pestis biovar Microtus str. 91001] gi|51595824|ref|YP_070015.1| OmpA family outer membrane protein [Yersinia pseudotuberculosis IP 32953] gi|108806760|ref|YP_650676.1| hypothetical protein YPA_0763 [Yersinia pestis Antiqua] gi|145598791|ref|YP_001162867.1| hypothetical protein YPDSF_1507 [Yersinia pestis Pestoides F] gi|149366559|ref|ZP_01888593.1| putative exported protein [Yersinia pestis CA88-4125] gi|167467063|ref|ZP_02331767.1| hypothetical protein YpesF_04015 [Yersinia pestis FV-1] gi|218928612|ref|YP_002346487.1| hypothetical protein YPO1469 [Yersinia pestis CO92] gi|229841445|ref|ZP_04461604.1| putative exported protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843557|ref|ZP_04463700.1| putative exported protein [Yersinia pestis biovar Orientalis str. India 195] gi|294503448|ref|YP_003567510.1| hypothetical protein YPZ3_1338 [Yersinia pestis Z176003] gi|45436046|gb|AAS61602.1| putative exported protein [Yersinia pestis biovar Microtus str. 91001] gi|51589106|emb|CAH20726.1| OmpA family of outer membrane porins [Yersinia pseudotuberculosis IP 32953] gi|108778673|gb|ABG12731.1| hypothetical protein YPA_0763 [Yersinia pestis Antiqua] gi|115347223|emb|CAL20117.1| putative exported protein [Yersinia pestis CO92] gi|145210487|gb|ABP39894.1| hypothetical protein YPDSF_1507 [Yersinia pestis Pestoides F] gi|149290933|gb|EDM41008.1| putative exported protein [Yersinia pestis CA88-4125] gi|229689165|gb|EEO81228.1| putative exported protein [Yersinia pestis biovar Orientalis str. India 195] gi|229697811|gb|EEO87858.1| putative exported protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|262364848|gb|ACY61405.1| hypothetical protein YPD8_0715 [Yersinia pestis D182038] gi|294353907|gb|ADE64248.1| hypothetical protein YPZ3_1338 [Yersinia pestis Z176003] Length = 578 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + +L + I + GHTD A+ N LSL Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + L S VS + G+ R +D + NRR++I + Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 549 >gi|254283478|ref|ZP_04958446.1| OmpA family protein [gamma proteobacterium NOR51-B] gi|219679681|gb|EED36030.1| OmpA family protein [gamma proteobacterium NOR51-B] Length = 199 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 10/131 (7%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIR 269 +GV E +LI + T F S++ + +L + VL + +I I Sbjct: 53 AREGVSVERRDDHLLIVM---PGTASFASDSALLKSNMLGLLDDLSTVLQEFNKSLIFIG 109 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 GH+D+ N LS RA + L K G+ R+ + GF + +D + Sbjct: 110 GHSDSLGDSG---YNLYLSRQRALAVGTHLSKVGIDSWRLV-VRGFGDAKPIATNDTESG 165 Query: 330 A--NRRIDILV 338 NRRI++ V Sbjct: 166 RAGNRRIELTV 176 >gi|113969010|ref|YP_732803.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4] gi|113883694|gb|ABI37746.1| OmpA/MotB domain protein [Shewanella sp. MR-4] Length = 230 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N F + VL + Sbjct: 89 YMDVQETKLRQQLASTGVSVTRDGDNIILNM---PNEVTFGVDQTELSDGAKRVLNSVAL 145 Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V +++ G+TD+ N RLS RA LM GV+ R+ G Sbjct: 146 VAKEYSKTQLNVLGYTDS---SGSDSYNLRLSQVRASEVGNYLMSKGVASARVKS-KGMG 201 Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339 + + + NRR++I++ Sbjct: 202 EASPIASNANAAGRAQNRRVEIVLT 226 >gi|330443988|ref|YP_004376974.1| peptidoglycan-associated lipoprotein [Chlamydophila pecorum E58] gi|328807098|gb|AEB41271.1| peptidoglycan-associated lipoprotein [Chlamydophila pecorum E58] Length = 189 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPL-PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ S E + +L + + S +V I GHTD A N L RA + Sbjct: 85 FETDSYSIKGEENLSILTTLVHHMKKSPKVTLYIEGHTDER---GAASYNLALGSRRANA 141 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 L+K G+S +R+ IS + + NRR + + R Sbjct: 142 VKNYLIKQGISAERLFTIS-YGKEHPRNPGHDELAWQQNRRTEFKIYAR 189 >gi|329114347|ref|ZP_08243109.1| Outer membrane protein [Acetobacter pomorum DM001] gi|326696423|gb|EGE48102.1| Outer membrane protein [Acetobacter pomorum DM001] Length = 376 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290 FD S+ ++ + + H I + G+TD S P + N LSL Sbjct: 267 VFFDWDKSVLTARARQIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNLGLSLR 326 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA S L++ GV I + G+ + + + NRR++I++ Sbjct: 327 RADSVKAELIRDGVPASAID-VHGYGEAHPLVPTGPNTREPQNRRVEIIL 375 >gi|258541881|ref|YP_003187314.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01] gi|256632959|dbj|BAH98934.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01] gi|256636016|dbj|BAI01985.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-03] gi|256639071|dbj|BAI05033.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-07] gi|256642125|dbj|BAI08080.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-22] gi|256645180|dbj|BAI11128.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-26] gi|256648235|dbj|BAI14176.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-32] gi|256651288|dbj|BAI17222.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654279|dbj|BAI20206.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-12] Length = 375 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290 FD S+ ++ + + H I + G+TD S P + N LSL Sbjct: 266 VFFDWDKSVLTARARQIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNLGLSLR 325 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA S L++ GV I + G+ + + + NRR++I++ Sbjct: 326 RADSVKAELIRDGVPASAID-VHGYGEAHPLVPTGPNTREPQNRRVEIIL 374 >gi|149277661|ref|ZP_01883801.1| possible outer membrane protein [Pedobacter sp. BAL39] gi|149231349|gb|EDM36728.1| possible outer membrane protein [Pedobacter sp. BAL39] Length = 174 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 5/108 (4%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 N F+ +S + + +L ++ + V + S N LS+D Sbjct: 67 NFNNIQFEFNSDVLKTASFEILDQVVREMKKDLTVGFVLN--GNSSAEGSVEHNLSLSVD 124 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 RA S L+ +G+ + I GF + +D NRR++I Sbjct: 125 RANSVKSYLVNAGIPAANL-SIKGFGATKPITTNDSEEGRALNRRVEI 171 >gi|258405704|ref|YP_003198446.1| peptidoglycan-associated lipoprotein [Desulfohalobium retbaense DSM 5692] gi|257797931|gb|ACV68868.1| peptidoglycan-associated lipoprotein [Desulfohalobium retbaense DSM 5692] Length = 199 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 7/145 (4%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + +++S D + ++ + R FD S P+ VLQ Sbjct: 57 MDMETSVSEEPKDVDEWEAKESSGAAEEEKALSNLREEIYFDFDSFELKPDARDVLQDKA 116 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L + I GH D N L RA +AY+ L+ G+ +R+ +S + Sbjct: 117 ALLDDNPGYKMIIEGHCDER---GTQEYNLALGERRARAAYEFLILLGIDANRLQIVS-Y 172 Query: 316 AHHRLKI--ASDPMNSANRRIDILV 338 R + +++ + NRR + + Sbjct: 173 GEERPAVEGSNEAAWAKNRRCEFKI 197 >gi|120597137|ref|YP_961711.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1] gi|120557230|gb|ABM23157.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1] Length = 481 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 8/111 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S LPE+ VL+ + L + + GHTD + N LS RA + Sbjct: 374 LFDYDSERMLPESKPVLEVLATYLKQNPALSFYVVGHTDD---KGERSYNQSLSERRAAA 430 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342 + L ++ + +++ G + + +D NRR+++++ + Sbjct: 431 VIKQLNETFNIPSVQLTA-HGNGEYSPVASNANDTGQRLNRRVELVLRSDK 480 >gi|329915272|ref|ZP_08276241.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium IMCC9480] gi|327544948|gb|EGF30290.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium IMCC9480] Length = 212 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 18/166 (10%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +++ + + L+ + T R + I + Sbjct: 42 ELSSSLQDEIAKRQAEEQRRMTLEKALA----------IPLATGRITLNNGRIGISGQVL 91 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPF-RNIARDNWRLSLDR 291 F +S PE +L + + L + G TD DNW LS R Sbjct: 92 FGLNSDQLQPEGRQLLTTLVKPLQAYLTTRDELLMVSGFTDDISIRGGRFADNWELSAQR 151 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335 A + + L+ G+ + + F + + D + NRR++ Sbjct: 152 ALTVTRALIDEGMPSAMVFAAA-FGAEQPVSPNTDDAARAQNRRVE 196 >gi|319796166|ref|YP_004157806.1| ompa/motb domain protein [Variovorax paradoxus EPS] gi|315598629|gb|ADU39695.1| OmpA/MotB domain protein [Variovorax paradoxus EPS] Length = 273 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 82/277 (29%), Gaps = 10/277 (3%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 ++ Y L G Q ++ + + + ++ + Sbjct: 1 MKSYLRVLSFTLGLVMVGAVQAQTAAAPGARVETTPAASAKGEQVVAGGQVPDEATRVAV 60 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 I+ S N+++ + ++ + + + Sbjct: 61 IEALRRIYGPSGVVDKIEVVNTVSMPANWSANVQRLITPALKDIHRGQFQIEGTQMALSG 120 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + + Q + ++++L+ V I + T F+ S+ Sbjct: 121 EVGNEALRQKIVSDMANSLNPTYTIKNSLRVPVSEQ---ITVDQALANRTIEFELGSATL 177 Query: 245 LPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + +L ++ +L T + GHTD N LS RA + L+ G Sbjct: 178 TRKGRDILDEMAPILQKLTNKSVAVIGHTDN---AGSRASNLALSQSRAEAVKGYLVGKG 234 Query: 304 VSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 + ++ SG + + D S NRRI+ V Sbjct: 235 IDPMTLTT-SGVGPDQPVANNATDEGRSRNRRIEFRV 270 >gi|298372894|ref|ZP_06982884.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275798|gb|EFI17349.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058] Length = 587 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 76/290 (26%), Gaps = 16/290 (5%) Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 K I K +QN + + +D E T Sbjct: 300 KIKNITDKTETAYKTNANGEYTAKLKQNKTYSITASAVDYLDAEPKVIEKDTYVAEKTPS 359 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 K ++ G + + + Sbjct: 360 VKHDIYMQKKESAKPTEYTVMGKVMDEDSGKTIGNAVVTVENNTNGTEQNYLTNSFGEYS 419 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---- 236 + A + + + S D L + + Sbjct: 420 VALKAYETYTISATAPECLPSEGKKFKKDTYDPSKTSTVENNIYLKRVKKNEAIRLDNVH 479 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +D + + P+ L ++ + L + ++ + HTD+ N RLS RA + Sbjct: 480 YDLNKATIRPDARPELDRLVKYLKDNPKIRVEMSSHTDSR---GSDAYNQRLSQQRADAV 536 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI-----ASDPMN--SANRRIDILV 338 L++ G++ RI + G+ +L ++ NRR ++ V Sbjct: 537 KLYLVEKGIAPSRIKSV-GYGETKLLNNCGNGSNCTEEQHQLNRRTEMKV 585 >gi|322418016|ref|YP_004197239.1| OmpA/MotB domain-containing protein [Geobacter sp. M18] gi|320124403|gb|ADW11963.1| OmpA/MotB domain protein [Geobacter sp. M18] Length = 459 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + P+ + K+ + + ++ GHTD N +LS +RA SA Sbjct: 352 FDTGKADIGPQYKGEMAKVADYMKQYPTTTAVIEGHTDNV---GGYEYNMKLSRERAESA 408 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 + L+ + G+ + R+S G+ + R + + NRRI+ +++ Sbjct: 409 VRYLVDNFGIEKSRLSA-KGYGYTRRVAYNRTAEGRAKNRRINAIID 454 >gi|162454713|ref|YP_001617080.1| hypothetical protein sce6431 [Sorangium cellulosum 'So ce 56'] gi|161165295|emb|CAN96600.1| Putative outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 293 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 77/236 (32%), Gaps = 18/236 (7%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 S +Q + + E + + L L ++ + + + L Sbjct: 47 SQHQTTEGRLAETQKELEAAQAKVAELTKQLEAAGVDIGKLNENLQATSTQVSQLSSTLE 106 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 K R ++L+ + + + L + + G+ ++IS+ + Sbjct: 107 EREKALAEFKARARQLEAIKARFET-LKKKLDELTKLGLAVNIRNNRMVISL---PGDVL 162 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE----VISIRGHTDASP-FRNIARDNWRLSLDR 291 FD E +L K+ V+ + + GHTD P RDNW LSL R Sbjct: 163 FDSGRETLKKEGKEILLKVATVVKNDKSLLQRDYQVAGHTDNKPLVGGQFRDNWGLSLMR 222 Query: 292 AYSAYQVLMK-------SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A L+ G +GFA +D NRR D++V Sbjct: 223 AREVLVFLVSPADVKGGGGALPVANWSAAGFADTDPVATNDTDEGRQKNRRCDLIV 278 >gi|190574725|ref|YP_001972570.1| hypothetical protein Smlt2808 [Stenotrophomonas maltophilia K279a] gi|190012647|emb|CAQ46275.1| putative OmpA family membrane protein [Stenotrophomonas maltophilia K279a] Length = 212 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 67/173 (38%), Gaps = 20/173 (11%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 LS+ +K+++ + + L+G +A R ++ I Sbjct: 39 AVQLELSQRLDQEVKQRQAEAKRLQTLEQALAGPLAAG----------RVTLVDGRIGIS 88 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPFRN---IARDNW 285 + +F +S PE +L+ + LA + G TD +P R DNW Sbjct: 89 GSVLFALNSDQLQPEGQELLRSLAAPLAAYLGSREEILMVSGFTDDAPVREGNRRFADNW 148 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336 LS R+ + + L+ GV D + + F + A++ + NRR++I Sbjct: 149 ELSAQRSLTVTRTLIADGVPADAVFAAA-FGSEQPVSSNANEEGRARNRRVEI 200 >gi|167625617|ref|YP_001675911.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167355639|gb|ABZ78252.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4] Length = 224 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 51/144 (35%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG- 256 + + L GV + I++++ + F + VL + Sbjct: 82 YMDVQEAELRKLLQSSGVSVTRSGDNIILNMPNDVT---FGVDQTDLSQRAQQVLNSVVL 138 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +++ G+TD+ N RLS RA L V R++ G Sbjct: 139 VALEYDETKLNVMGYTDS---SGAESYNLRLSQVRASEVANYLTNHKVPAQRVAS-HGMG 194 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 + ++ + NRR++I++ Sbjct: 195 ESKPIASNQTKQGRAENRRVEIIL 218 >gi|325106387|ref|YP_004276041.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] gi|324975235|gb|ADY54219.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] Length = 666 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 12/130 (9%) Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFR 278 T ++I ++ + + P + L + +++ + ++ + HTD Sbjct: 541 CLTPLVIDKPIVLKDIYYEFNKAELTPMSAQALDILADIMMDNPKITIELSSHTDGI--- 597 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-------PMNSAN 331 N LS RA S L+ G+S +I G+ + + N Sbjct: 598 GSDAYNLDLSQRRAQSCVDYLIAKGISAGKIQA-KGYGKSMPIAPNTINGKDNPEGRALN 656 Query: 332 RRIDILVEDR 341 RR + V + Sbjct: 657 RRTEFKVIKK 666 >gi|224370138|ref|YP_002604302.1| Pal [Desulfobacterium autotrophicum HRM2] gi|223692855|gb|ACN16138.1| Pal [Desulfobacterium autotrophicum HRM2] Length = 197 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 67/186 (36%), Gaps = 16/186 (8%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 K E E P + + K++ + + ++ + S L + K Sbjct: 25 AKKPVVSEPMGAALEGTVDPDAAAKAAALAKQRAMEEAMLREKALKESALKDAELAKQAA 84 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275 + T I F S+ P + +L++ L + ++ + GH D Sbjct: 85 ARSRFTNQNIH---------FAYDSADLTPMSRTLLKEKALWLGENPGVMVVVEGHCDDR 135 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333 N L RA+SA + L G++E R+S IS + R ++ + NRR Sbjct: 136 ---GTMEYNLALGDRRAFSAKKFLTDLGIAESRLSTIS-YGEERPIDPANNETAWAKNRR 191 Query: 334 IDILVE 339 +++ Sbjct: 192 AQFVIK 197 >gi|192361426|ref|YP_001981532.1| outer membrane protein [Cellvibrio japonicus Ueda107] gi|190687591|gb|ACE85269.1| outer membrane protein [Cellvibrio japonicus Ueda107] Length = 154 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 6/106 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + FD E+ VL + L ++ + + GH D N L RA Sbjct: 51 HVVYFDFDQYALTAESRAVLLAHADKLKGASVAVRLEGHADER---GSREYNMALGEKRA 107 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 + L+ GVS + ++ F + + S NRR++I Sbjct: 108 NAVRDFLVTQGVSGSSL-EVVSFGEEQPVALGHDESAWSQNRRVEI 152 >gi|229588474|ref|YP_002870593.1| hypothetical protein PFLU0931 [Pseudomonas fluorescens SBW25] gi|229360340|emb|CAY47197.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 257 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 45/140 (32%), Gaps = 10/140 (7%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L GV + I + + F +S L + L Sbjct: 90 DQQEKKLRESMANTGVEVQRQGDQIKLIM---PGNITFATNSDAISSSFYQPLNNLANSL 146 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L GV+ +S G Sbjct: 147 KQFNQNTIQIVGYTDST---GSRQLNMDLSQRRAQSVANYLTSQGVNGANLSA-RGAGPD 202 Query: 319 RLKIASDP--MNSANRRIDI 336 ++ + NRR+++ Sbjct: 203 NPIASNADVNGRAQNRRVEV 222 >gi|222869877|gb|EEF07008.1| predicted protein [Populus trichocarpa] Length = 219 Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D + FD + S +L + E L ++ + I GHTD++ N LS Sbjct: 81 DIPSDISFDTNRSDIKGNFAPILDRFAEGLRNNPNAEVRIIGHTDST---GSDAINNPLS 137 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 LDRA S L GVS RI G H+ ++D + NRR++I V Sbjct: 138 LDRANSTRNYLTMRGVSGARI-ATEGRGSHQPVASNDSASGRAMNRRVEIFV 188 >gi|332290809|ref|YP_004429418.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332168895|gb|AEE18150.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 674 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 76/289 (26%), Gaps = 12/289 (4%) Query: 60 DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119 + L ++ D+ + I D ++ Sbjct: 389 SKYDDFSLSYYSDNNGLYATNRNGTDDDIYSFVQTGEIITREFKTQFEIRDADTDELISD 448 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + + Y + + + LT D + + + + P Sbjct: 449 AAIKILGYQGKEVYADRKEDAAPFQVPLTVDDYTFIASGDNHEEGRMDIQIRGIQTAPYV 508 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL-ISIIDQRNTPMFD 238 + + K +S L + + FD Sbjct: 509 IKVKRIFTDSELALMKEKNLSKDLKEKDPSRFELLTDVNAPQVVEKEGKLFMDVAPIYFD 568 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + ++ VL ++ L + I HTD+ A N LS RA S + Sbjct: 569 FDLHVVREDSQAVLDRLAAKLTKYKRIKIKISSHTDSR---GPAAYNMPLSEKRAKSTFD 625 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRRIDILVED 340 L+ G+ RI + G+ + I ++ + NRR + + Sbjct: 626 YLVSKGIDASRI-QYQGYGDTKPVINCPVGKCTEDDHQLNRRSEFEITG 673 >gi|186894908|ref|YP_001872020.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis PB1/+] gi|186697934|gb|ACC88563.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+] Length = 581 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + +L + I + GHTD A+ N LSL Sbjct: 446 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 502 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + L S VS + G+ R +D + NRR++I + Sbjct: 503 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 552 >gi|124005068|ref|ZP_01689910.1| peptidoglycan-associated cytoplasmic membrane protein, putative [Microscilla marina ATCC 23134] gi|123989320|gb|EAY28881.1| peptidoglycan-associated cytoplasmic membrane protein, putative [Microscilla marina ATCC 23134] Length = 680 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 10/129 (7%) Query: 217 FETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDA 274 + I D+ +F S P I L I L TE++ I GHTD Sbjct: 551 VKEDIPLTKIKPGDKLGLQVLFGFDSYQIQPRYISHLDSIANYLKEYTEMVVEISGHTDN 610 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASD--PMNSAN 331 N L+ R+ + L+ K G+ ++ G+A + + + N Sbjct: 611 I---GNRWYNNLLAKRRSQAVINYLINKKGIPAAQVV-FKGYADSKPLGTNTTVTGRALN 666 Query: 332 RRID-ILVE 339 RR+D I+++ Sbjct: 667 RRVDGIVIK 675 >gi|108810029|ref|YP_653945.1| putative lipoprotein [Yersinia pestis Antiqua] gi|108810484|ref|YP_646251.1| lipoprotein [Yersinia pestis Nepal516] gi|145600441|ref|YP_001164517.1| lipoprotein [Yersinia pestis Pestoides F] gi|165927314|ref|ZP_02223146.1| ompA family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936533|ref|ZP_02225101.1| ompA family protein [Yersinia pestis biovar Orientalis str. IP275] gi|166009010|ref|ZP_02229908.1| ompA family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212007|ref|ZP_02238042.1| ompA family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167418991|ref|ZP_02310744.1| ompA family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426023|ref|ZP_02317776.1| ompA family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|270487963|ref|ZP_06205037.1| OmpA family protein [Yersinia pestis KIM D27] gi|294502545|ref|YP_003566607.1| lipoprotein [Yersinia pestis Z176003] gi|108774132|gb|ABG16651.1| lipoprotein [Yersinia pestis Nepal516] gi|108781942|gb|ABG16000.1| putative lipoprotein [Yersinia pestis Antiqua] gi|145212137|gb|ABP41544.1| lipoprotein [Yersinia pestis Pestoides F] gi|165915649|gb|EDR34258.1| ompA family protein [Yersinia pestis biovar Orientalis str. IP275] gi|165920776|gb|EDR38024.1| ompA family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992349|gb|EDR44650.1| ompA family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206753|gb|EDR51233.1| ompA family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166962985|gb|EDR59006.1| ompA family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167054946|gb|EDR64746.1| ompA family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|270336467|gb|EFA47244.1| OmpA family protein [Yersinia pestis KIM D27] gi|294353004|gb|ADE63345.1| lipoprotein [Yersinia pestis Z176003] Length = 165 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +FD E + +QKIG +L+ + + + GHTD+ N +LS R Sbjct: 58 NKVLFDSDVKKLNSEGMQTVQKIGRILSDVGIKHMRVDGHTDSV---GKDDYNQQLSYQR 114 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A + L G+ + I + G + + NRR+ I++ Sbjct: 115 ALAVADTLATVGIPKSNID-VRGRGKLEPVADNRTSKGRAENRRVAIIITAS 165 >gi|33600833|ref|NP_888393.1| putative lipoprotein [Bordetella bronchiseptica RB50] gi|33568433|emb|CAE32345.1| putative lipoprotein [Bordetella bronchiseptica RB50] Length = 200 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRG 270 +GV + + I+++ +FD + L LQ I +++ T +++I G Sbjct: 69 HEGVSVRQGKDAVTIAMM---GDVLFDFDKADILAAAEPTLQDIAKLIKSPATGIVAIEG 125 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--------I 322 HTD+ + N LSL RA + Q L GV ++ + G R Sbjct: 126 HTDS---KGSDSYNKGLSLRRAQAVAQWLGAHGVDAAKL-SVRGLGAARPVQPNQLANGA 181 Query: 323 ASDPMNSANRRIDILVEDR 341 + + NRR++ ++ +R Sbjct: 182 DNPQGRAQNRRVEFVLPNR 200 >gi|323698024|ref|ZP_08109936.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. ND132] gi|323457956|gb|EGB13821.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans ND132] Length = 184 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S E+ +L + +L +V + GH D N L RA +A Sbjct: 83 FAFNSYELSDESRSILAQKATILRKFADVNVVIEGHCDER---GTEEYNLALGERRARAA 139 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 Y+ L+ GV +R+ +S + ++ + NRR + +++ Sbjct: 140 YEHLVILGVEPERMKIVS-YGEEYPVDPGHNETAWAKNRRDEFVIK 184 >gi|157373855|ref|YP_001472455.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3] gi|157316229|gb|ABV35327.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3] Length = 226 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 11/150 (7%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + L GV + I++++ N F + VL + Sbjct: 84 YMDTQEAELRKQLQSTGVSVTRSGDNIVLNM---PNEVTFGVDQTDLSSGAKRVLNSVAL 140 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V + ++ G+TD+ N RLS RA L+ + R+ G Sbjct: 141 VAKEYDQTQLNVLGYTDS---SGAESYNLRLSKIRAIEVGNYLVAQKIEYGRVKS-EGLG 196 Query: 317 HHRLKIASDPM--NSANRRIDILVED-RQG 343 R + + NRR++I++ QG Sbjct: 197 ESRPIATNATAEGRAQNRRVEIVLSPLPQG 226 >gi|254475344|ref|ZP_05088730.1| OmpA/MotB [Ruegeria sp. R11] gi|214029587|gb|EEB70422.1| OmpA/MotB [Ruegeria sp. R11] Length = 208 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 4/105 (3%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D T F S+ E +L + + E + GHTDA N L Sbjct: 58 DVPTTINFAFDSAQLDAEARAILDQQAHWIRQFPEVRFRVYGHTDAV---GSNSYNKTLG 114 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L RA +A L+ G+S R+ + F + I + NRR Sbjct: 115 LRRARAAVSYLVSRGISRSRLQAVVSFGETQPLIPTSDRERRNRR 159 >gi|167839895|ref|ZP_02466579.1| hypothetical protein Bpse38_24699 [Burkholderia thailandensis MSMB43] Length = 215 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +++++ K + L+G +A R ++ I + + Sbjct: 43 ELSSKLDAEVRQRQLESQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGSVL 92 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S P +L+ + LA E++ + G D R DNW LS Sbjct: 93 FALNSDELQPAGRDLLKSLAGPLAAYLDANHEILMVSGFADDLQVRTGNRRFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + + GV + + F + + D + NRR++I Sbjct: 153 KRALTVTRAFIDEGVPAASVFAAA-FGSEQPVSPNSDDAGRAKNRRVEI 200 >gi|148264196|ref|YP_001230902.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4] gi|146397696|gb|ABQ26329.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4] Length = 520 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 76/270 (28%), Gaps = 15/270 (5%) Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K + + + ++ + + + I S+ + + + + Sbjct: 257 KAVPKLASENDEKNKKQEIVKPVKIIPITSLIKTAVPIVPASKLEIPVDPDKEEIVIKPY 316 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA--KK 198 S + + + E P L + L+ + Sbjct: 317 GQITIPSQPVSTPVVMPLLPREAKVIQLESEIPVEPKAEIATELNPVAESSLEGVTPLYG 376 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I + N + + D MF+ E L ++ E Sbjct: 377 IEVKGDNIEVSNAKPTQISQKMSVYRKFRFPD----IMFEFGQIELSNEVKKALSEVAEQ 432 Query: 259 LAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGF 315 + I GHTD+ N LS+ RA + L +K G+ R+ + G Sbjct: 433 ARTDKTWLYLRIDGHTDSIGSVG---YNMDLSIKRAIAIASYLIIKEGIDPTRVF-VKGM 488 Query: 316 AHHRLKIASDPMNSA--NRRIDILVEDRQG 343 +L + + NRR ++L +G Sbjct: 489 GKSKLIADNSTTDGRRMNRRFEVLFLVPKG 518 >gi|1000844|gb|AAA78948.1| 18.5 kDa protein [Bartonella bacilliformis] Length = 171 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 41/117 (35%), Gaps = 10/117 (8%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + F SS+ + +L + E L I GH D N L R Sbjct: 31 DRVFFSLDSSVIEADAQRILVRQAEWLLLYPHHTIMIEGHADDR---GTREYNLALGQRR 87 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED---RQG 343 A + L+ GVS R+ +S + R + NRR+ I + R+G Sbjct: 88 AIAVRDYLVSLGVSPQRMKTMS-YGKERPVAVCDDISCWNQNRRVVISITSGAVRKG 143 >gi|229894342|ref|ZP_04509525.1| Outer membrane protein [Yersinia pestis Pestoides A] gi|229703740|gb|EEO90756.1| Outer membrane protein [Yersinia pestis Pestoides A] Length = 327 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + +L + I + GHTD A+ N LSL Sbjct: 192 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 248 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + L S VS + G+ R +D + NRR++I + Sbjct: 249 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 298 >gi|134292200|ref|YP_001115936.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4] gi|134135357|gb|ABO56471.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4] Length = 224 Score = 89.6 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 +F + P L K+ T +++ G+TD+ N LS R Sbjct: 118 GDALFATGQATLTPAARASLDKLLSEREDHTYTEVTVTGYTDS---AGSDAANLALSKRR 174 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 A + L G+ + ++G ++ NRR++I ++ Sbjct: 175 ADVVARYLHAHGLKAHTM-AVAGRGSADPVGSNATAEGRAANRRVEISLKR 224 >gi|78189006|ref|YP_379344.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins-like [Chlorobium chlorochromatii CaD3] gi|78171205|gb|ABB28301.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins-like protein [Chlorobium chlorochromatii CaD3] Length = 183 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S L++ + I I GH D N L RA Sbjct: 79 DVFFDFNKSELGTTRNEQLKRNANWIKAHPTSNIIIEGHCDER---GTNEYNIALGERRA 135 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 SA ++ GV R++ +S + + +++ + NRR+ + Sbjct: 136 NSAKDYMVTLGVDPARLTTVS-YGEEKPVAIGSTEEAWAQNRRVHFI 181 >gi|99082187|ref|YP_614341.1| OmpA/MotB [Ruegeria sp. TM1040] gi|99038467|gb|ABF65079.1| OmpA family protein [Ruegeria sp. TM1040] Length = 207 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ E VL + + E + GHTDA N RL L RA +A Sbjct: 66 FDFDSARLDGEARRVLDTQAKWIRQFPEVRFRVYGHTDAV---GSQTYNKRLGLRRARAA 122 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L+ G+S R+ ++ F + I +D NRR Sbjct: 123 VNYLVSRGISRSRLEAVASFGETQPLIVTDQRERRNRR 160 >gi|238794810|ref|ZP_04638412.1| OmpA family protein [Yersinia intermedia ATCC 29909] gi|238725890|gb|EEQ17442.1| OmpA family protein [Yersinia intermedia ATCC 29909] Length = 169 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +FD P + +QKIG LA+ + + GHTD+ N +LSL+R Sbjct: 62 NKVLFDSDVRELNPSGVQRVQKIGRALANVGIHHMRVDGHTDSI---GEDGYNQQLSLER 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A + L G+ I + G + + NRR+ ++V Sbjct: 119 ASAVADALATIGIPRANID-VRGRGKLEPVADNHTPKGRAENRRVSMIVTAP 169 >gi|237753154|ref|ZP_04583634.1| OmpA/MotB domain-containing protein [Helicobacter winghamensis ATCC BAA-430] gi|229375421|gb|EEO25512.1| OmpA/MotB domain-containing protein [Helicobacter winghamensis ATCC BAA-430] Length = 466 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 6/103 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F +SS P +I + + I I GHTD + + N +LS RA + Sbjct: 121 FKSASSTLNPNAKDYYTQIAKTYQVKDKKILIVGHTDDT---GNSAFNQKLSEKRARAVG 177 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 +V ++GVS I G + K ++ + NRR++I+ Sbjct: 178 KVFAQNGVSTKNIY-YQGAGSTQPKADNNTEKGRAENRRVEII 219 >gi|186893942|ref|YP_001871054.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis PB1/+] gi|186696968|gb|ACC87597.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+] Length = 168 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +FD E + +QKIG +L+ + + + GHTD+ N +LS R Sbjct: 61 NKVLFDSDVKKLNSEGMQTVQKIGRILSDVGIKHMRVDGHTDSV---GKDDYNQQLSYQR 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A + L G+ + I + G + + NRR+ I++ Sbjct: 118 ALAVADTLATVGIPKSNID-VRGRGKLEPVADNRTSKGRAENRRVAIIITAS 168 >gi|114048845|ref|YP_739395.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7] gi|113890287|gb|ABI44338.1| OmpA/MotB domain protein [Shewanella sp. MR-7] Length = 230 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV I++++ N F + VL + Sbjct: 89 YMDVQETKLREQLASTGVSVTRDGDNIILNM---PNEVTFGVDQTELSDGAKRVLNSVAL 145 Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V +++ G+TD+ N RLS RA LM GV+ R+ G Sbjct: 146 VAKEYSKTQLNVLGYTDS---SGSDSYNLRLSQVRASEVGNYLMSKGVASARVKS-KGMG 201 Query: 317 HHRLKIA--SDPMNSANRRIDILVE 339 + + + NRR++I++ Sbjct: 202 EASPIASNANAAGRAQNRRVEIVLT 226 >gi|149909537|ref|ZP_01898191.1| outer membrane protein [Moritella sp. PE36] gi|149807442|gb|EDM67393.1| outer membrane protein [Moritella sp. PE36] Length = 211 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 6/105 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD ++ ++ VL I ++L + + + GH D + A N+ L L R+ Sbjct: 110 RVYFDFDNAHLTDKSKYVLDTIMQLLKLNNNNLVVEGHADTT---GTADYNFSLGLKRSR 166 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 S Q L + GV + R+ S +D NRR++I Sbjct: 167 SVAQYLKQLGVEKGRLEATS-VGDTMPISDNDTEAGRQLNRRVEI 210 >gi|21111774|gb|AAM40073.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575109|gb|AAY50519.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 431 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 16/123 (13%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD 283 +I++ D+ +FD + P+ VL + L + + +RGHTDA + Sbjct: 316 VITLSDR---ILFDFDKADIRPDAARVLDTLAAALGKVSVAQMEVRGHTDA---KGGDDY 369 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------DP-MNSANRRIDI 336 N LS RA + L G ++ + G+ + + +P NRR+++ Sbjct: 370 NQALSERRANAVLAALRTRGTAQS--ASAKGYGESQPLAPNTVKGQDNPGGRQLNRRVEL 427 Query: 337 LVE 339 + Sbjct: 428 FLR 430 >gi|88810227|ref|ZP_01125484.1| OmpA/MotB [Nitrococcus mobilis Nb-231] gi|88791857|gb|EAR22967.1| OmpA/MotB [Nitrococcus mobilis Nb-231] Length = 263 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 73/210 (34%), Gaps = 9/210 (4%) Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 +S Q+ + ++ + + L + I + E + + + + +R Sbjct: 57 AQDSLQAAQTAWTEEQNQARAEHLAYTAQRHAEIAQAEAAKQAAIVQSQQIMKQRDTLRL 116 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 ++ T + + + +T I + + +F S+ L Sbjct: 117 QSRSQLVETQQRQIEVLREQLAELKPKQTEQGIML--TLSHVLFAFDSARLQSAAQAPLD 174 Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 K+ L ++ I G+TD++ A N RLS RA S + + GV + ++ Sbjct: 175 KLATYLRERPQIQVKIVGYTDST---GAANYNQRLSKRRAQSVADAMAQRGVERASM-RV 230 Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVED 340 G ++ NRR++ + + Sbjct: 231 VGRGESNPVASNATEQGRQLNRRVEFTLLN 260 >gi|110638113|ref|YP_678322.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110280794|gb|ABG58980.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 631 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 N F +S ++I L+K+ + + + + + G+TD A N +LS R Sbjct: 526 NNIFFQTNSYQLEEKSISELKKLINFIQINPAQRVELAGYTDNV---GTAEANLKLSAMR 582 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 A + Y L++ G+ I G+ ++ NRR++I + Sbjct: 583 AKAVYDYLIQHGIKPAGI-TYKGYGAASPVADNNSEEGRQKNRRLEIKIL 631 >gi|299069861|emb|CBJ41142.1| putative transmembrane protein, OmpA/MotB motif [Ralstonia solanacearum CMR15] Length = 215 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 20/173 (11%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 LS +++++ K + L+G +A R ++ I Sbjct: 39 AVQLELSSRLENEVEQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGIS 88 Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNW 285 + +F +S PE + +L+ + L E++ + G D DNW Sbjct: 89 GSVLFALNSDQLQPEGLELLKSLAGPLSAYLRSRDEILMVSGFADDQQVHAGNRRFADNW 148 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 LS RA + + L+ +G+ + + F + ++ D + NRR++I Sbjct: 149 ELSAKRALTVTRTLIDAGIPGASVFAAA-FGSEQPVSSNADDAGRAKNRRVEI 200 >gi|4580965|gb|AAD24552.1|AF117960_1 OprF [Pseudomonas agarici] Length = 322 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P + ++ + + + + ++ G+TD N +LS RA++ Sbjct: 221 FDFDKSVVKPNSYADIKNLADFMKQYPQTSTVVKGYTDNV---GTDAYNQKLSERRAHAV 277 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 QVL GV + R+S + G+ + ++ NRR++ Sbjct: 278 AQVLTNQYGVEQSRVSSL-GYGKNNPAASNATKEGQAINRRVE 319 >gi|294672984|ref|YP_003573600.1| OmpA family protein [Prevotella ruminicola 23] gi|294473810|gb|ADE83199.1| OmpA family protein [Prevotella ruminicola 23] Length = 374 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 7/108 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 N +F+ + PE++ +QK+ + + + ++GHTD + N LS R Sbjct: 269 NNILFETGKATLKPESMEEIQKVADYMKKNPSVRFEVQGHTDNQ---GSDKINDPLSQQR 325 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 A + + L + G E + + G H + D + NRR++ + Sbjct: 326 AEAVVKALAQLGCDEFNLRAV-GKGSHEPVADNKTDAGRAQNRRVEFI 372 >gi|23013938|ref|ZP_00053784.1| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum MS-1] Length = 218 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 16/178 (8%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 + + + ++ L S L + + V GI++++ + Sbjct: 45 EQVQQGMAKDIGLRETKTPLQDLRSEMLGQVTGAGVEDTVDVGRDDKGIVLNL---ASGT 101 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIAR-DNWRLSLDR 291 MF S+ PE + ++++I L I I+GHTD +P R NW LS R Sbjct: 102 MFKPGSAEVRPEILPLMKEISATLKQERFLNYQIDIQGHTDDTPVRTPQFPSNWDLSAAR 161 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPM------NSANRRIDILVEDR 341 A S +V+ + G+ +R+ ++ A ++ + D + NRR++I + R Sbjct: 162 ALSTLKVMNELGIPTNRMK-LAALADTAPRVPNRSDTGKAYPENQAINRRVEIHIYPR 218 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 54/156 (34%), Gaps = 10/156 (6%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF---------NPFG 73 + W + YAD +T+LMAFF+V+ ++ D + + ++Q Sbjct: 5 HKENKEAAEDWLLSYADMITLLMAFFIVLVSMSKIDKNKYEQVQQGMAKDIGLRETKTPL 64 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 ++L + G + + D I ++ ++ K GS + + L I Sbjct: 65 QDLRSEMLGQVTGAGVEDTVDVGRDDKGIVLNLASGTM-FKPGSAEVRPEILPLMKEISA 123 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 ++ + + + ++ ++ Sbjct: 124 TLKQERFLNYQIDIQGHTDDTPVRTPQFPSNWDLSA 159 >gi|157737365|ref|YP_001490048.1| hypothetical protein Abu_1119 [Arcobacter butzleri RM4018] gi|157699219|gb|ABV67379.1| hypothetical outer membrane protein [Arcobacter butzleri RM4018] Length = 854 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 5/110 (4%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 +F+ +S++ ET + L + E +I GH P A N +LS RA Sbjct: 747 VLFENNSAVIKEETKGKVLSFARYLLDNKEFNTIIEGHASKDPTA-SAAHNQKLSEQRAA 805 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + +L+ +GV RI I G H+ + NRRID ++ + Sbjct: 806 AIKNLLISNGVEASRIQSI-GKGHNEPIADNSTAEGQALNRRIDAILIRK 854 >gi|126664143|ref|ZP_01735136.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteria bacterium BAL38] gi|126623857|gb|EAZ94552.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteria bacterium BAL38] Length = 621 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 92/260 (35%), Gaps = 16/260 (6%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 N E + +K D + + TK ++ + N + Sbjct: 372 NVGEPVNTSKDDFAFTYNTTKKVGFFSSNRDGNDDIFKADPICKVQALVRVKDAKTGNVI 431 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GL 206 + D ++T +S L A K+ + +++ + + Sbjct: 432 EGATVMLVDEKQTTITNQSTASNGETLSGVLCNTAYSAQVSKQGYESGVFEVAKAENDQV 491 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 V + ++ ++ T +++ F+ S + L K+ V+ + +I Sbjct: 492 VVEALLNPIMPIITEKEVILQ------PIYFEYDKSNITADGAAELNKLIIVMNENPNMI 545 Query: 267 SIR-GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-- 323 HTD+ + N +LS RA + Q L+ G++++RI GF K+A Sbjct: 546 IFAKSHTDSR---GSDKYNMKLSDRRAKATVQYLLSKGIAKERI-SGQGFGESEPKVACK 601 Query: 324 --SDPMNSANRRIDILVEDR 341 ++ ++ NRR + L+ + Sbjct: 602 SCTEEEHAQNRRSEFLIVKK 621 >gi|51594942|ref|YP_069133.1| OmpA/OmpF family outer membrane porin [Yersinia pseudotuberculosis IP 32953] gi|51588224|emb|CAH19831.1| putative OmpA/OmpF family outer membrane porin [Yersinia pseudotuberculosis IP 32953] Length = 168 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +FD E + +QKIG +L+ + + + GHTD+ N +LS R Sbjct: 61 NKVLFDSDVKKLNSEGMQTVQKIGRILSDVGIKHMRVDGHTDSV---GKDDYNQQLSYQR 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A + L G+ + I + G + + NRR+ I++ Sbjct: 118 ALAVADTLATVGIPKSNID-VRGRGKLEPVADNRTSKGRAENRRVAIIITAS 168 >gi|218960421|ref|YP_001740196.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167729078|emb|CAO79989.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 781 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 6/105 (5%) Query: 237 FDKSSSIPLPETIVVLQKIG-EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S++ E+ +L +I +L + T + I GHT + + N LS +RA + Sbjct: 678 FDYDSAVLKAESYPILNEIALTLLNNPTIRVEISGHTCENQ--GGEKYNTTLSENRAAAV 735 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L GV+ +R+ + G+ R + + NRR+++ + Sbjct: 736 LSYLKGKGVNANRMISV-GYGLSRPLNNNLSEEDKALNRRVEVKI 779 >gi|91785192|ref|YP_560398.1| OmpA family outer membrane protein [Burkholderia xenovorans LB400] gi|91689146|gb|ABE32346.1| outer membrane protein, OmpA family [Burkholderia xenovorans LB400] Length = 267 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + F S++ P L + + G+TDA+ N LS Sbjct: 159 QGNANFATDSAVLSPIAKKNLDDFMRANQGVNLHRVMVVGYTDAT---GSEAHNLNLSQA 215 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 RA + Q L G+ ++ G ++ NRR+D+ V Sbjct: 216 RAAAVVQYLRDGGLRAEQFVA-RGLGSADPVASNATAEGRMQNRRVDVRVLA 266 >gi|323357271|ref|YP_004223667.1| outer membrane protein [Microbacterium testaceum StLB037] gi|323273642|dbj|BAJ73787.1| outer membrane protein [Microbacterium testaceum StLB037] Length = 165 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 13/114 (11%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +FD S+ P+ VL + +L + ++ GHTDA +N LS R Sbjct: 52 DAVLFDFDSAEIRPDAAGVLDSLAALLTQGAVPAATVSGHTDAI---GTDAENQVLSERR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-------PMNSANRRIDILV 338 A + L + G D G+ R A++ NRR++ILV Sbjct: 109 AQAVVDALRRRGTQTD--WTAEGYGESRPVAANELDGVDNPAGRQLNRRVEILV 160 >gi|281420329|ref|ZP_06251328.1| lipoprotein PG3 [Prevotella copri DSM 18205] gi|281405631|gb|EFB36311.1| lipoprotein PG3 [Prevotella copri DSM 18205] Length = 248 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 7/143 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + V + V+ V + + ++ + +F + S L + VL Sbjct: 100 KAEAEQVKNAQVETVTDANGLSAVKVTF---ASGILFPTNGSTLSSSAKTDLAQFAGVLK 156 Query: 261 HSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 ++T+ +SI+G+TDA+ N LS RA + Y L GV+ ++ + GF Sbjct: 157 NNTDCEVSIQGYTDAT---GNDGINLPLSQKRAEAVYNYLASCGVTSRQVKNVQGFGSAN 213 Query: 320 LKIASDPMNSANRRIDILVEDRQ 342 + + + NRR+++ + Q Sbjct: 214 PVVNTTAACAQNRRVEVYMYASQ 236 >gi|298529291|ref|ZP_07016694.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510727|gb|EFI34630.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 359 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ E +L + + T+ + + GHT N LS RA S Sbjct: 258 FDFDSAAIKDEYAEILNEAARQIQDRTDPHVVVEGHTCNI---GPEDYNMELSQRRADSV 314 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L++ GV ED I R + +D NRR+++ +E Sbjct: 315 ADYLVEQGVDEDAIDT-EAHGLTRPEFDNDTREGRQLNRRVEMRLE 359 >gi|209965094|ref|YP_002298009.1| outer membrane lipoprotein omp16 [Rhodospirillum centenum SW] gi|209958560|gb|ACI99196.1| outer membrane lipoprotein omp16 [Rhodospirillum centenum SW] Length = 163 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + F PE L + L +++ GH D N L R Sbjct: 58 DRVFFGFDRFDLTPEATATLDRQAAWLKQYPNVTVTVEGHADER---GTREYNLALGERR 114 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + L GV R+ IS + R + + + + NRR Sbjct: 115 ATAVKNYLTALGVDTARVQTIS-YGKERPAVLGSDESAWAQNRR 157 >gi|152994404|ref|YP_001339239.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1] gi|150835328|gb|ABR69304.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1] Length = 359 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 89/297 (29%), Gaps = 30/297 (10%) Query: 55 NATDDDTKKAIEQYFNPFGKNLM-----TASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 N D D + Y P N+ A G D N + ++ + Sbjct: 83 NNVDVDQYRLDGLYHLPTISNVNLTPYLAAGVGTTDFSNASGHDNVQVNAGGGLKYALND 142 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 +V L+ +N+ L + T + + + +++ + Sbjct: 143 TVSLRADFRLVNDVEDHHLDNVTSLGVQMTFGGSSRNSTSNDDDYTPVEQTSYTQVEPAA 202 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + P A + ++ + T I I Sbjct: 203 QPQQATQPEVISSEPAEQVQEEPITASPMAEETTQQPEI--------VAEPPGKINIQ-- 252 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 F + + + ++KI L + + I GHTD A N +LS Sbjct: 253 -------FGLNKTNVEQKFYPEIEKIAIFLKENPGSTVMIEGHTDN---SGAASYNQKLS 302 Query: 289 LDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA + +VL + +S R+ I G+ R + +D NRR+ ++ + Sbjct: 303 EKRAKAIAEVLTNTFEISATRVEAI-GYGEERPFVENDTEAHREANRRVVAIISTSE 358 >gi|269964125|ref|ZP_06178424.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269831140|gb|EEZ85300.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 197 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 7/120 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285 S + + +F SS P + + + L I ++G+T N Sbjct: 67 SSQEMQIRVLFANDSSEIDPVFAKQISDLSDFLKEYPTTSIELQGYTS---ITGTDEYNL 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 LS RA S Q L+ +G+S DR+ +I GF L + ++ NRR+ V +G Sbjct: 124 ALSKRRAESVRQELINNGISPDRL-RIVGFGETNLASTGTDETSHALNRRVTATVVGYKG 182 >gi|153833086|ref|ZP_01985753.1| outer membrane protein [Vibrio harveyi HY01] gi|148870654|gb|EDL69561.1| outer membrane protein [Vibrio harveyi HY01] Length = 208 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 7/113 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 +F SS P + + + + L I ++G+T N LS RA Sbjct: 85 RVLFANDSSAIDPVFVNQISDLSDFLKEYPTTSIELQGYTS---ITGTDEYNLALSKRRA 141 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 S Q L+ +G+S +R+ +I GF L + ++ NRR+ V +G Sbjct: 142 ESVRQELINNGISPERL-RIVGFGETNLASQGTDETSHALNRRVTATVVGYKG 193 >gi|329945590|ref|ZP_08293324.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328528682|gb|EGF55644.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 321 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 57/181 (31%), Gaps = 9/181 (4%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 E + K A K + + D ++ T + Sbjct: 114 PESGLFEGVPVVRDGKLSEDAKKALEDVYDTESTPDPVALETFTASVDGASDTRVTGKSV 173 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 I++ +FD S+ + L+K + L+ ++I GHTD Sbjct: 174 TITLASD---VLFDSDSADLSAQADTTLKKAADQLSTYPGGQVTIVGHTDDV---ADDAH 227 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 N LS RA + L + +SG ++ +D NRR++I + Sbjct: 228 NQDLSQRRAQAVSDRLGQLASMSAYSVSVSGKGESEPRVPNDSDENRQLNRRVEITLVPT 287 Query: 342 Q 342 Q Sbjct: 288 Q 288 >gi|158422035|ref|YP_001523327.1| outer membrane protein [Azorhizobium caulinodans ORS 571] gi|158328924|dbj|BAF86409.1| outer membrane protein [Azorhizobium caulinodans ORS 571] Length = 381 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 79/237 (33%), Gaps = 10/237 (4%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 N L++ + + IF ++ N D + + + D ++ Sbjct: 147 PPNRTSLEVLENYRTALQAAGASEIFTCAHRACGGRDFNIAQVDPQNYTRMGDNYDDQRY 206 Query: 167 INKEENYFLPPLSKEK--ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + + + +D + D + V I Sbjct: 207 LAARLQAPGKDVYVALFITRSQSGAAADKDRIFTQLHVIEVKSMDANMVVVDASRMADSI 266 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 + +FD +S++ PE+ L +I +L + + + + GHTD Sbjct: 267 GKTGSVALYGILFDFNSAVIKPESKATLDEIASLLRKAPDLKLVVVGHTDNV---GGMDS 323 Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 N +LS RA + + L++ ++ R+ G ++ D + NRR++++ Sbjct: 324 NMKLSQARAEAVRRALVEQYAIAAARLQAW-GAGFMAPVASNRTDEGRAKNRRVELV 379 >gi|90412166|ref|ZP_01220172.1| Conserved hypothetical outer membrane protein [Photobacterium profundum 3TCK] gi|90326890|gb|EAS43275.1| Conserved hypothetical outer membrane protein [Photobacterium profundum 3TCK] Length = 220 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 6/144 (4%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 A ++ + + + + F S PE+ VL+ I Sbjct: 80 AALLALITETNIGSQCWEYLNTAGLLNTTRTQDKNLIARVYFAFDSQHLTPESQTVLKTI 139 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + L +S + +++ GHTD+ N+ L L RA S+ Q L+ + V + + + + Sbjct: 140 AQKLKNSPQTVTLNGHTDSV---GPQGYNYTLGLQRAKSSMQYLIDNEVKDTNLKSKT-Y 195 Query: 316 AHHRLKIASDP--MNSANRRIDIL 337 + ++ + NRR+D++ Sbjct: 196 GETQPIESNTTSQGRAMNRRVDVV 219 >gi|89068018|ref|ZP_01155435.1| OmpA family protein [Oceanicola granulosus HTCC2516] gi|89046257|gb|EAR52314.1| OmpA family protein [Oceanicola granulosus HTCC2516] Length = 218 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 50/146 (34%), Gaps = 7/146 (4%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-RNTPMFDKSSSIPLPETI 249 + + ++S +NI + D+ + F S+ PE Sbjct: 26 DAEAGSTYLASDFGAATVNNIAVQADGTNYVLILAQRFADEVPSMVNFAFDSANLGPEAR 85 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + E S+ GHTD N RL RA + L GVS DR Sbjct: 86 AILDVQASWINQFPELRFSVYGHTD---LVGSDAYNRRLGERRARAVVAYLASRGVSTDR 142 Query: 309 ISKISGFAHHRLKI-ASDPMNSANRR 333 + + F + + DP + NRR Sbjct: 143 LEALVSFGETQPLVLTQDPERA-NRR 167 >gi|255319440|ref|ZP_05360655.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens SK82] gi|262379403|ref|ZP_06072559.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens SH164] gi|255303508|gb|EET82710.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens SK82] gi|262298860|gb|EEY86773.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens SH164] Length = 190 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 7/105 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD SS E LQ + L + +++ GHTD N L RA Sbjct: 80 VYFDYDSSDLSNEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAK 136 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 + L+ +GV+ +++ +S + + NRR++I Sbjct: 137 AVQSYLVTNGVNPNQLEAVS-YGKEMPINPGHDEAAWKENRRVEI 180 >gi|162452165|ref|YP_001614532.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] gi|161162747|emb|CAN94052.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 467 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 87/296 (29%), Gaps = 10/296 (3%) Query: 52 WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSV 111 + A P + P R + + + + Sbjct: 176 LAPSIAATAPFVAAPARERPHDAVSSAPPRTAAYSTPHPSREGPPRQRQTREWLLPTLLA 235 Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 +G + +RL+ ++ ++ + + E Sbjct: 236 AAVLGGLWAFVRERRLDRTAAAPTHEAPVAAAPREDLAQPVAPPPQPEAPPPQPEAPRAE 295 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKIS-STLSGLVADNIVKGVLFETTRTGILISIID 230 S+ A + ++L+ A +++ L D Sbjct: 296 APTAAAPSEAPPNAPEVVEQLRITAGEMTLPGGKVLSVDEHSSEAEIARYLDAGAAEGPR 355 Query: 231 QRNT--PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287 + + F ++ + L+ + ++L + I GHTDA A N L Sbjct: 356 RFSMEGINFQFGTTELTEASRPKLEALADILDAYPTARVRIEGHTDAV---GGAEGNRSL 412 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 SL RA L ++ DRI +++G ++ +D + NRRID+ V R Sbjct: 413 SLARAQEVRNELTARQIAPDRI-EVAGMGANQPVAPNDTAGGRAQNRRIDVTVLSR 467 >gi|192360671|ref|YP_001983282.1| OmpA family protein [Cellvibrio japonicus Ueda107] gi|190686836|gb|ACE84514.1| OmpA family protein [Cellvibrio japonicus Ueda107] Length = 217 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 59/174 (33%), Gaps = 10/174 (5%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + + A + + + L A+ GV + + + Sbjct: 51 DNAKDRRERALKGAAIGGVIGGGVGNYMDRQEAKLRAELQGTGVQVRREGNNLYLIM--- 107 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 F SS+ + VL + +V+A + I + GHTD++ N LS Sbjct: 108 PGNITFATSSADIRSDFFPVLNSVAKVVAEFNQTSIRVTGHTDST---GSDSINQPLSER 164 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 RA S L V+ RI G+ ++D NRR+++ + + Sbjct: 165 RADSVAMYLRSQKVASARIQAY-GYGSRYPVASNDTPTGREQNRRVELELIPNE 217 >gi|330899613|gb|EGH31032.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT] Length = 133 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290 F SS L + L + I I G+TD++ + N LS Sbjct: 20 PGNITFATDSSAIASSFYSPLNNLASSLKQFNQNNIEIVGYTDST---GSRQHNMDLSQQ 76 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 RA S L GV + + + G + ++ + NRR+++ ++ G Sbjct: 77 RAQSVATYLTSQGVDQAHL-SVRGAGPDQPIASNADVNGRAQNRRVEVNLKPIPG 130 >gi|253998106|ref|YP_003050169.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4] gi|253984785|gb|ACT49642.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4] Length = 170 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +FD + ++ + +QK+ + L + + I GH DA+ N LS R Sbjct: 63 DKLLFDTNQAVLNDRSRGAVQKVSKALQSVGLDKMRIEGHADAT---GRESYNVELSEQR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A++ ++SG+ + I + G ++ + NRR+ I+V Sbjct: 120 AWAVADAFIQSGMPKSGII-VRGMGSQSPVASNATVAGRAENRRVSIIVVTD 170 >gi|254525016|ref|ZP_05137071.1| OmpA family protein [Stenotrophomonas sp. SKA14] gi|219722607|gb|EED41132.1| OmpA family protein [Stenotrophomonas sp. SKA14] Length = 212 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 66/173 (38%), Gaps = 20/173 (11%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 LS+ +K+++ + + L+G +A R ++ I Sbjct: 39 AVQLELSQRLDQEVKQRQAEAKRLQTLEQALAGPLAAG----------RVTLIDGRIGIS 88 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPFRN---IARDNW 285 + +F +S PE +L+ + LA + G TD +P R DNW Sbjct: 89 GSVLFALNSDQLQPEGQELLRSLAAPLAAYLGSREEILMVSGFTDDAPVREGNRRFADNW 148 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 LS R+ + + L+ GV D + + F + ++ + NRR++I Sbjct: 149 ELSAQRSLTVTRTLIADGVPADAVFAAA-FGSEQPVSSNASEDGRARNRRVEI 200 >gi|315124911|ref|YP_004066915.1| outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018633|gb|ADT66726.1| outer membrane fibronectin-binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 319 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 216 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 272 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L K GV + RI + G+ + ++D NRR+D Sbjct: 273 ANELEKYGVEKSRIKTV-GYGQDNSRSSNDTKEGRADNRRVD 313 >gi|254506333|ref|ZP_05118476.1| outer membrane protein [Vibrio parahaemolyticus 16] gi|219550813|gb|EED27795.1| outer membrane protein [Vibrio parahaemolyticus 16] Length = 225 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 60/208 (28%), Gaps = 9/208 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +Q+ +S + + + + I A Sbjct: 21 QATQRQNATTGESETNSATSGAIIGAIAGAAIGVATGDDAKDRRKRALIGAAGGAAVGGG 80 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + L + + GV E L ++ N F SS L+ Sbjct: 81 VGYYFDQQEAALRQELLNSGVQVERVGENQL--LLRLENGIGFSSSSYQLDSSIHNTLRG 138 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + + GHTD++ N LS RA S L+ GV+ R Sbjct: 139 VARILVEYPDTSLVIEGHTDST---GSDTTNQILSERRAESVRSYLVSQGVAAGRAIA-R 194 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVE 339 G + NRR++I + Sbjct: 195 GNGERYPLCTNSTAEGRACNRRVEIQIL 222 >gi|212633550|ref|YP_002310075.1| OmpA protein [Shewanella piezotolerans WP3] gi|212555034|gb|ACJ27488.1| OmpA [Shewanella piezotolerans WP3] Length = 222 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG- 256 + + L GV + I++++ + F + VL + Sbjct: 82 YMDVQEAELRKQLQSSGVSVTRSGDTIILNMPNDVT---FGVDQTDLSQRAKQVLNSVAL 138 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +++ GHTD+ A N RLS RA LM V R+ G Sbjct: 139 VALEYDETKLNVMGHTDS---SGAASYNMRLSQVRASEVASYLMSRKVPSARVVS-HGVG 194 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 R +++ + NRR++I++ Sbjct: 195 EDRPVASNETKAGRAENRRVEIIL 218 >gi|156974655|ref|YP_001445562.1| hypothetical protein VIBHAR_02373 [Vibrio harveyi ATCC BAA-1116] gi|156526249|gb|ABU71335.1| hypothetical protein VIBHAR_02373 [Vibrio harveyi ATCC BAA-1116] Length = 208 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 7/113 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 +F SS P + + + L I ++G+T N LS RA Sbjct: 85 RVLFANDSSAIEPVFVNQISDLSNFLKEYPTTSIELQGYTS---ITGTDEYNLALSKRRA 141 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 S Q L+ +G+S +R+ +I GF L + ++ NRR+ V +G Sbjct: 142 ESVRQELINNGISPERL-RIVGFGETNLASQGTDETSHALNRRVTATVVGYKG 193 >gi|152995997|ref|YP_001340832.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1] gi|150836921|gb|ABR70897.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1] Length = 311 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 84/251 (33%), Gaps = 14/251 (5%) Query: 95 QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154 Q L + N + + + + + + L ++ +++ S+ + +R Sbjct: 44 QGDSQLIQLAPLEFNEAEQAVKTAEEPRTDEMLGRHLMFVAYSKVEIAENRAKSR----M 99 Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 L + ++ L + AM+ K + L + + + + Sbjct: 100 LVLERKQLSQQRNEATLAARNRELGVARNDAMQSKADAEKLR--MEANAERNRSQEFQRQ 157 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTD 273 + + I+ F + P ++ L K+ L + + G+TD Sbjct: 158 LGMLNAKATNRGMIM-TLGDLSFATGKAKLQPSVLIDLDKLVVFLNKYADRSIVIEGNTD 216 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--N 331 + N RLS RA + L+ G++ R+ + +D N Sbjct: 217 SV---GSEALNLRLSQHRASAVRDYLVGKGINSARL-TVVANGEGNPLDTNDSKLGRQHN 272 Query: 332 RRIDILVEDRQ 342 RR+DI++ + + Sbjct: 273 RRVDIVISNTE 283 >gi|332994178|gb|AEF04233.1| TolC family type I secretion outer membrane protein [Alteromonas sp. SN2] Length = 616 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 9/110 (8%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 F +SS PE + L ++ + L + I GH A N RLS RA Sbjct: 508 NISFASNSSKISPEYVSSLSQVIDALEKYDNAGVIIHGHAS---LDGDAAYNQRLSERRA 564 Query: 293 YSAYQVLMK--SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + +L++ + + RI+ + G+ R + + N+ NRRI+ + Sbjct: 565 SAVAALLIESTNDIDSRRITSV-GYGETRPLVDEESPAANAKNRRIEATI 613 >gi|88802743|ref|ZP_01118270.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P] gi|88781601|gb|EAR12779.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P] Length = 289 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 92/245 (37%), Gaps = 15/245 (6%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 TK + Q N++ + +++T + E L + Sbjct: 32 TNTKGDLQKTTIEKEQLAAKFSAIEARVENYNTKINSLKSDNVTLERENEVKLSMVGNAA 91 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQD-----LAKKISSTLSGLVADNIVKGVLFET 219 + L+K + A+ + K L+D +A + ++ L + + Sbjct: 92 VISTQTRALMNETLTKVDVNALSKAKTLKDSLNLAIAYNLKKSIDILEIE-SSDDIDINI 150 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFR 278 +T ++IS+ D+ +F+ +S ++ K+ V+ + + I GHTD+ Sbjct: 151 DQTVVMISVSDKL---LFNTASYRVKKGAYKLIAKLAAVIKSEPSMDVMIEGHTDSRTIS 207 Query: 279 NIA-RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334 N +DNW LS+ RA S ++L K V R+ SG + + NRR Sbjct: 208 NAVVQDNWDLSVKRATSIVRLLESKYKVEGSRLIA-SGRGSTMPLVDNSSSENRRKNRRT 266 Query: 335 DILVE 339 I++ Sbjct: 267 KIVIL 271 >gi|91975364|ref|YP_568023.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] gi|91681820|gb|ABE38122.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] Length = 464 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 85/285 (29%), Gaps = 13/285 (4%) Query: 58 DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 D ++AI NL ++ P Q D V Sbjct: 190 DLGGREAIAAALR----NLPEGYSVAENDIKAPPYVFQANKDPVASTLTLTGYVPDNAVH 245 Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + + + N + S + I + L Sbjct: 246 AALADTAGQKFFSEKVVDNLKASIGAPQGFANAVKPALGALSRLSTGTLIVSDREVRLSG 305 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + + + + L + + + L V + + ++T F Sbjct: 306 DALFEAAVSQIRAELNKDMPQGWTVKADLSVKPAASPVDATVCQQLFNDLLG--KSTVRF 363 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 D +S+ ++ +L ++ E I + GHTD+ A N LS RA + Sbjct: 364 DSASASIDKDSAGLLDRLIETAMRCPGAAIEVAGHTDS---AGEAGSNQALSERRARAVV 420 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 ++++G+S +R G+ ++ + NRRID ++ Sbjct: 421 DYMVRAGLSPERFRAF-GYGSKIPLEGNETDAGKAKNRRIDFMIR 464 >gi|325286304|ref|YP_004262094.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324321758|gb|ADY29223.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 372 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S + E L+++ L + ++I GH+D A+ N LSL+RA S Sbjct: 253 LFTSDSYVINKEAKGQLRELVRHLKRNPRLNVTIYGHSDNE---GDAKYNKLLSLNRAKS 309 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 + L+ +G++ DRI G+ ++ NRR++ +V + + Sbjct: 310 VGEFLLDNGLTFDRIK-WQGYGDEIPLATNNSETGRLKNRRVEFVVSESK 358 >gi|308186299|ref|YP_003930430.1| Outer membrane protein A precursor [Pantoea vagans C9-1] gi|308056809|gb|ADO08981.1| Outer membrane protein A precursor [Pantoea vagans C9-1] Length = 356 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L+ + + G TD + N +LS Sbjct: 228 KSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRI---GSEQYNQKLS 284 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN---------RRIDIL 337 RA S L+ G+ ++IS G + D + N RR++I Sbjct: 285 EKRAQSVVDYLVSKGIPSNKISA-RGMGKSNPVTGNTCDSVKGRNALIDCLSPDRRVEID 343 Query: 338 VED 340 V+ Sbjct: 344 VKG 346 >gi|317047599|ref|YP_004115247.1| OmpA domain-containing protein transmembrane region-containing protein [Pantoea sp. At-9b] gi|316949216|gb|ADU68691.1| OmpA domain protein transmembrane region-containing protein [Pantoea sp. At-9b] Length = 356 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L+ + + G TD + N +LS Sbjct: 228 KSDVLFNFNKATLKPEGQQALDQLYSQLSSLDPKDGSVVVLGFTDRI---GSEQYNQKLS 284 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN---------RRIDIL 337 RA S L+ G+ ++IS G + D + N RR++I Sbjct: 285 EKRAQSVVDYLVSKGIPANKISA-RGMGKSNPVTGNTCDSVKGRNALIDCLAPDRRVEID 343 Query: 338 VED 340 V+ Sbjct: 344 VKG 346 >gi|170692926|ref|ZP_02884087.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] gi|170141924|gb|EDT10091.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] Length = 218 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 68/169 (40%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +K+++ K + L+G +A R ++ I + Sbjct: 46 ELSNKLEQEVKQRQVETQRRKTLEEALAGPLAAG----------RVTLVNGRIGISGNVL 95 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S P+ +L+ + L S +++ + G TD R DNW LS Sbjct: 96 FALNSDQLQPQGRDLLKSLAGPLSAYLRASDQILMVSGFTDDQRLREGNRRFADNWELSA 155 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+++GV + + F + ++ + + NRR++I Sbjct: 156 QRALTVTRALIEAGVPAPSLFAAA-FGSGQPVSSNADEQGRARNRRVEI 203 >gi|163742214|ref|ZP_02149602.1| OmpA family protein [Phaeobacter gallaeciensis 2.10] gi|161384544|gb|EDQ08925.1| OmpA family protein [Phaeobacter gallaeciensis 2.10] Length = 211 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ VL + + E + GHTDA A N L L RA +A Sbjct: 68 FAFDSAQLDGNAHAVLDQQAHWIRQFPEVRFRVFGHTDAV---GSASYNKALGLRRARAA 124 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L+ G+S R+ + F + I + NRR Sbjct: 125 VNYLVGRGISRSRLQAVVSFGETQPLIPTSDRERRNRR 162 >gi|254480140|ref|ZP_05093388.1| OmpA family protein [marine gamma proteobacterium HTCC2148] gi|214039702|gb|EEB80361.1| OmpA family protein [marine gamma proteobacterium HTCC2148] Length = 213 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 64/168 (38%), Gaps = 20/168 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS+ + R++ QD + L+ +A R + I + + Sbjct: 42 ELSQSLQQEVTRREAEQDRRMVLEEALAAPLASG----------RITLRDGRIGISGSVL 91 Query: 237 FDKSSSIPLPETIVVLQKIGEVLA----HSTEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S E +L + L +++ + G TD P ++ DNW LS Sbjct: 92 FALNSDQLQAEGRELLSSLIPPLKLYLLEQNDLLMVSGFTDDLPIQDGNLHFNDNWELSA 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335 RA + + L++ G+ + + F + +A+ S NRR++ Sbjct: 152 QRALTVTRALIEEGMPPSLVFAAA-FGAEQPVVANTDSESRSRNRRVE 198 >gi|261855938|ref|YP_003263221.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] gi|261836407|gb|ACX96174.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] Length = 207 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD P L K+ + + I + G+TD+ + N LS RA + Sbjct: 100 FDFDKYNLKPAGKEALDKLISEMGDMNSIAKIKVVGYTDSI---GTEKYNIGLSERRANT 156 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 + L + D+I G ++ + NRR+ + Sbjct: 157 VAKYLTAHNIPADKIET-QGMGEADPVASNKTKEGRAKNRRVVVT 200 >gi|253698930|ref|YP_003020119.1| OmpA/MotB domain protein [Geobacter sp. M21] gi|251773780|gb|ACT16361.1| OmpA/MotB domain protein [Geobacter sp. M21] Length = 204 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 T FD SS+ L E L + + I GH+D N LS R Sbjct: 98 ETIYFDFDSSLLNDAARATLVANLEKLKANPKASLRIEGHSDER---GSDDYNLALSERR 154 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 A SA + L G +++ + G+ R + + + NRR + ++ Sbjct: 155 AQSAKKYLQALGFPAEKL-SVLGYGEERPAVKGESEEFWAKNRRDEFVIAR 204 >gi|170725100|ref|YP_001759126.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908] gi|169810447|gb|ACA85031.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908] Length = 497 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F+ S LPE V++ + L + + GHTD N LS R Sbjct: 387 DGLLFEFDSDKMLPEAKAVVKVVASYLKSHPKQRFYVIGHTDDQ---GKQSYNQLLSDKR 443 Query: 292 AYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 A + + L + +D++ G + + NRR+++++ Q Sbjct: 444 AKAVVKQLTTAHQIPKDQL-TGKGVGEYSPVANNSNEAGQKLNRRVELVLRSDQ 496 >gi|22127605|ref|NP_671028.1| outer membrane protein [Yersinia pestis KIM 10] gi|45443467|ref|NP_995006.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001] gi|150260516|ref|ZP_01917244.1| putative lipoprotein [Yersinia pestis CA88-4125] gi|153949584|ref|YP_001402443.1| ompA family protein [Yersinia pseudotuberculosis IP 31758] gi|162419496|ref|YP_001605396.1| ompA family protein [Yersinia pestis Angola] gi|167401635|ref|ZP_02307129.1| ompA family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167468843|ref|ZP_02333547.1| ompA family protein [Yersinia pestis FV-1] gi|170025832|ref|YP_001722337.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis YPIII] gi|218927645|ref|YP_002345520.1| putative lipoprotein [Yersinia pestis CO92] gi|229836972|ref|ZP_04457137.1| putative lipoprotein [Yersinia pestis Pestoides A] gi|229840332|ref|ZP_04460491.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842412|ref|ZP_04462567.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India 195] gi|229900672|ref|ZP_04515796.1| putative lipoprotein [Yersinia pestis Nepal516] gi|21960714|gb|AAM87279.1|AE013976_7 putative outer membrane protein [Yersinia pestis KIM 10] gi|45438336|gb|AAS63883.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001] gi|115346256|emb|CAL19127.1| putative lipoprotein [Yersinia pestis CO92] gi|149289924|gb|EDM40001.1| putative lipoprotein [Yersinia pestis CA88-4125] gi|152961079|gb|ABS48540.1| ompA family protein [Yersinia pseudotuberculosis IP 31758] gi|162352311|gb|ABX86259.1| ompA family protein [Yersinia pestis Angola] gi|167049017|gb|EDR60425.1| ompA family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|169752366|gb|ACA69884.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII] gi|229682011|gb|EEO78103.1| putative lipoprotein [Yersinia pestis Nepal516] gi|229690722|gb|EEO82776.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India 195] gi|229696698|gb|EEO86745.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705915|gb|EEO91924.1| putative lipoprotein [Yersinia pestis Pestoides A] gi|262360575|gb|ACY57296.1| putative lipoprotein [Yersinia pestis D106004] gi|262364521|gb|ACY61078.1| putative lipoprotein [Yersinia pestis D182038] gi|320016989|gb|ADW00561.1| putative lipoprotein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 168 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +FD E + +QKIG +L+ + + + GHTD+ N +LS R Sbjct: 61 NKVLFDSDVKKLNSEGMQTVQKIGRILSDVGIKHMRVDGHTDSV---GKDDYNQQLSYQR 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A + L G+ + I + G + + NRR+ I++ Sbjct: 118 ALAVADTLATVGIPKSNID-VRGRGKLEPVADNRTSKGRAENRRVAIIITAS 168 >gi|330819528|ref|YP_004348390.1| type IV / VI secretion system protein, DotU family [Burkholderia gladioli BSR3] gi|327371523|gb|AEA62878.1| type IV / VI secretion system protein, DotU family [Burkholderia gladioli BSR3] Length = 469 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 17/165 (10%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 P + K L+ L + + V + + Sbjct: 313 PPPQANAAPKPAGKSLKSLLAPLEQAGALAVDEQPDGRATVRL------------AAGLL 360 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295 F + P I +L+++ L + + GHTD P R+ +DN+ LS RA + Sbjct: 361 FPSGGADIAPAEIPLLRQVAAALNQVKGRVIVVGHTDDQPIRSLKFKDNFALSTARAQNT 420 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP---MNSANRRIDIL 337 +L G+ + R + +G + + NRR++IL Sbjct: 421 LAIL-AQGLDDPRRLEANGAGSSQPIATPPSLPENRARNRRVEIL 464 >gi|146306310|ref|YP_001186775.1| OmpA domain-containing protein [Pseudomonas mendocina ymp] gi|330502226|ref|YP_004379095.1| OmpA domain-containing protein [Pseudomonas mendocina NK-01] gi|145574511|gb|ABP84043.1| OmpA domain protein [Pseudomonas mendocina ymp] gi|328916512|gb|AEB57343.1| OmpA domain-containing protein [Pseudomonas mendocina NK-01] Length = 166 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS E + L + L + + + GH D N L RA + Sbjct: 67 FEYDSSDLKAEAMRALDVHAKDLKGNGARVVLEGHADER---GTREYNMALGERRAKAVQ 123 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 124 RYLVLQGVSPAQLELVS-YGEERPVATGNDEQSWAQNRRVEL 164 >gi|186471185|ref|YP_001862503.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815] gi|184197494|gb|ACC75457.1| OmpA/MotB domain protein [Burkholderia phymatum STM815] Length = 215 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS A+K+++ K + L+G +A R ++ I + Sbjct: 43 ELSARLDDAVKQRQMEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGISGNVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S P+ +L+ + L E++ + G D R DNW LS Sbjct: 93 FALNSDQLQPQGRDLLKSLAAPLSAYLRSHDEILMVSGFADDQQVRAGNRRFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + + SG+ + + F + ++ + NRR++I Sbjct: 153 QRALTVTRAFIDSGIPASSVFAAA-FGSEQPVSSNADSEGRAKNRRVEI 200 >gi|194366042|ref|YP_002028652.1| hypothetical protein Smal_2266 [Stenotrophomonas maltophilia R551-3] gi|194348846|gb|ACF51969.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3] Length = 212 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 20/173 (11%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 LS+ +K+++ + + L+G +A R ++ I Sbjct: 39 AVQLELSQRLDQEVKQRQAEAKRLQTLEQALAGPLAAG----------RVTLVDGRIGIS 88 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPFRN---IARDNW 285 + +F +S PE +L+ + LA + G TD +P R DNW Sbjct: 89 GSVLFALNSDQLQPEGQELLRSLAAPLAAYLGTREEILMVSGFTDDAPVREGNRRFADNW 148 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 LS R+ + + L+ GV D + + F + ++ + + NRR++I Sbjct: 149 ELSAQRSLTVTRTLIADGVPADAVFAAA-FGSEQPVSSNADEAGRARNRRVEI 200 >gi|45659294|ref|YP_003380.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602540|gb|AAS72017.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 428 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S L + +L + L + + I GHTD ++DN LS +RA + Sbjct: 325 FSLGSYEILENSFSILDNLNSYLKENLNIKIKITGHTD---LNGDSQDNLILSRNRANAV 381 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 L+K G+ RI G + + + NRR + + R Sbjct: 382 KDYLVKRGIDSQRIIT-DGKGSSEPIVPMKNPETDYKNRRTEFQIISR 428 >gi|24217036|ref|NP_714517.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601] gi|24198445|gb|AAN51535.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601] Length = 428 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S L + +L + L + + I GHTD ++DN LS +RA + Sbjct: 325 FSLGSYEILENSFSILDNLNSYLKENLNIKIKITGHTD---LNGDSQDNLILSRNRANAV 381 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 L+K G+ RI G + + + NRR + + R Sbjct: 382 KDYLVKRGIDSQRIIT-DGKGSSEPIVPMKNPETDYKNRRTEFQIISR 428 >gi|319943060|ref|ZP_08017343.1| lipoprotein [Lautropia mirabilis ATCC 51599] gi|319743602|gb|EFV96006.1| lipoprotein [Lautropia mirabilis ATCC 51599] Length = 319 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 9/145 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 +++ + GV TR +L +D + F +S+ LP +L + Sbjct: 99 RQMEEQKRAMEEATAGTGVQVTQTRENLL--QLDIPSDISFRVNSAAILPNFQPILDRFA 156 Query: 257 EVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + L A+ + I GHTD++ N LS++RA SA L+ GV RI I G Sbjct: 157 QTLVANPATTVQIIGHTDST---GTDAINNPLSVNRAASARDYLVARGVQVSRIM-IDGR 212 Query: 316 AHHRLKIASDP--MNSANRRIDILV 338 + + NRR++I V Sbjct: 213 GSRDPIADNSTPAGRAQNRRVEIYV 237 >gi|83311658|ref|YP_421922.1| flagellar motor protein [Magnetospirillum magneticum AMB-1] gi|82946499|dbj|BAE51363.1| Flagellar motor protein [Magnetospirillum magneticum AMB-1] Length = 220 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 16/178 (8%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 + + + ++ L S L + + V GI++++ + Sbjct: 47 EQVQQGMAKDIGLRETKTPLQDLRSEVLGQVAGAGVEDTVDVGRDDKGIVLNL---ASGT 103 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIAR-DNWRLSLDR 291 MF S+ PE + ++++I L I I+GHTD +P R NW LS R Sbjct: 104 MFKPGSAEVRPEILPLMKEISGTLKQERFLNYQIDIQGHTDDTPVRTPQFPSNWDLSAAR 163 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPM------NSANRRIDILVEDR 341 A S +V+ + G+ R+ ++ A ++ + D + NRR++I + R Sbjct: 164 ALSTLKVMNELGIPTSRMK-LAALADTAPRVPNRSDTGKAYPENQAINRRVEIHIYPR 220 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 24/208 (11%), Positives = 58/208 (27%), Gaps = 17/208 (8%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP------- 71 K + W + YAD +T+LMAFF+V+ ++ D + + ++Q Sbjct: 3 KSKFHKENKEAAEDWLLSYADMITLLMAFFIVLVSMSKIDKNKYEQVQQGMAKDIGLRET 62 Query: 72 --------FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 A G+ D + ++L+ S +++ K+ Sbjct: 63 KTPLQDLRSEVLGQVAGAGVEDTVDVGRDDKGIVLNLASGTMFKPGSAEVRPEILPLMKE 122 Query: 124 YQRLENNIFYLSN--SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +L+ Q + + ++ +P + Sbjct: 123 ISGTLKQERFLNYQIDIQGHTDDTPVRTPQFPSNWDLSAARALSTLKVMNELGIPTSRMK 182 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVAD 209 R+ + + + + Sbjct: 183 LAALADTAPRVPNRSDTGKAYPENQAIN 210 >gi|87122282|ref|ZP_01078164.1| OmpA family protein [Marinomonas sp. MED121] gi|86162425|gb|EAQ63708.1| OmpA family protein [Marinomonas sp. MED121] Length = 204 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 8/158 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + RL D K + D + + + ++ +FD P Sbjct: 28 RARLADADKDGVIDVRDKCKDTLYGTNVDHYGCSQKSTKLLSVELKVLFDTGKHEVKPAF 87 Query: 249 IVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSE 306 L+++ L + + I GHTD N LS RA + V+ ++ Sbjct: 88 YSELRELASFLKKNPASSVIIEGHTDNV---GSKTSNQTLSFQRASAIAAVITDKFKIAP 144 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 +R+ GF +++ ANRR+ V RQ Sbjct: 145 NRVQA-KGFGETSPIASNETHSGREANRRVVAEVFSRQ 181 >gi|323720608|gb|EGB29686.1| outer membrane protein A ompA [Mycobacterium tuberculosis CDC1551A] Length = 291 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F + +P +L ++ + L + ++I G+TD + N LS R Sbjct: 186 GPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNT---GSEGINIPLSAQR 242 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A L+ GV+ D I+ + G ++ + NRR++I+V Sbjct: 243 AKIVADYLVARGVAGDHIATV-GLGSVNPIASNATPEGRAKNRRVEIVV 290 >gi|262376393|ref|ZP_06069622.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262308532|gb|EEY89666.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 255 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 7/118 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARD 283 +I + F+ S++ I +L ++ L + I GHTD+ Sbjct: 142 IIDAALKNRIIEFESGSAVLATSGIQILDEMVSALNKVSGKKIRIIGHTDS---SGDINK 198 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339 N LS RA + L+ V + G + + + NRRI+ V Sbjct: 199 NLMLSQQRAEAVKSYLIAKNV-PTHLLSTKGSGSSKPVADNATADGRKRNRRIEFEVL 255 >gi|255038084|ref|YP_003088705.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254950840|gb|ACT95540.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 648 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 80/276 (28%), Gaps = 11/276 (3%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 F + KG D ++ ++ N K + R Sbjct: 376 FFASNRDGGKGDDDIYYFAAPEDEDTTTVAKHTDPNDPLNPNNPNYINGKPKVVRYFLAG 435 Query: 132 FYLSNSQQSEHCKNSLTRD-SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + N + +++ R + K + S + ++ K Sbjct: 436 TVVENGETPSPIDSAVVRILPDTSDTQIAEYPTAKDGKFGKQSVEEGKSYQLLVQRKGYI 495 Query: 191 RLQDLAKKISSTLSG--LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ + L + + ++ +D P+ Sbjct: 496 SKREPFSMAGRNIPPIFLTKELTDTTFNVTIKLDKLELNKTFVLENIYYDLDKYNIRPDA 555 Query: 249 IVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + L K+ ++L + + + HTDA N LS +RA SA L G+ D Sbjct: 556 AIELDKLVQILKDNPTMTIELSSHTDAR---ATDAYNMTLSQNRAESAVAYLNSKGIEAD 612 Query: 308 RISKISGFAHHRLKIAS---DPMNSANRRIDILVED 340 R+ G+ L I + + + NRR + + Sbjct: 613 RMEA-KGYGERELIIPNAKTEEEHQRNRRTEFTILS 647 >gi|126175870|ref|YP_001052019.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155] gi|152999218|ref|YP_001364899.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185] gi|160873831|ref|YP_001553147.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195] gi|217971891|ref|YP_002356642.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223] gi|304411219|ref|ZP_07392834.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|307306514|ref|ZP_07586257.1| OmpA/MotB domain protein [Shewanella baltica BA175] gi|125999075|gb|ABN63150.1| OmpA/MotB domain protein [Shewanella baltica OS155] gi|151363836|gb|ABS06836.1| OmpA/MotB domain protein [Shewanella baltica OS185] gi|160859353|gb|ABX47887.1| OmpA/MotB domain protein [Shewanella baltica OS195] gi|217497026|gb|ACK45219.1| OmpA/MotB domain protein [Shewanella baltica OS223] gi|304350412|gb|EFM14815.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|306910805|gb|EFN41233.1| OmpA/MotB domain protein [Shewanella baltica BA175] gi|315266058|gb|ADT92911.1| OmpA/MotB domain protein [Shewanella baltica OS678] Length = 230 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 10/145 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N F + VL + Sbjct: 89 YMDVQETKLRQQLASTGVSVTRSGDNIILNM---PNEVTFGVDQTELSDGAKRVLNSVAV 145 Query: 258 VLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V +++ G+TD+ N RLS RA LM GV+ R+ G Sbjct: 146 VAKEYSKTQLNVLGYTDS---SGSDSYNLRLSQVRAGEVGNYLMSKGVASARVKS-KGMG 201 Query: 317 HHRLKIASDPM--NSANRRIDILVE 339 ++ + NRR++I++ Sbjct: 202 EASPIASNANANGRAQNRRVEIVLT 226 >gi|39934843|ref|NP_947119.1| porin [Rhodopseudomonas palustris CGA009] gi|39648693|emb|CAE27215.1| OmpA/MotB domain, possible porin [Rhodopseudomonas palustris CGA009] Length = 441 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 7/118 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 +S + F++ S++ + +L K+ + I + G+TD Sbjct: 328 RVSALASAEKISFERRSAVIDKASQPLLDKLAAAIKQCPAVTIEVAGYTD---GAGKKSA 384 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 N LS RA + L K G+ ++ G+ + A+D + NRRI+ +V+ Sbjct: 385 NIALSKRRAEAVVASLTKVGIGSVKLVA-EGYGSAKPIAANDTAEGRAQNRRIEFVVK 441 >gi|308273523|emb|CBX30125.1| hypothetical protein N47_D29340 [uncultured Desulfobacterium sp.] Length = 212 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 63/173 (36%), Gaps = 8/173 (4%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 L + KI G + +N + +T ++++ ++ Sbjct: 19 KSLAESFGSLTDKAASSAHPEVDKGKILEKALGGINENANDDIGIKTGAGREVLTMGEK- 77 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDR 291 +F + + PE+ +L+K+G + + I GHTD NW +S Sbjct: 78 --ALFYTNRHLLKPESFALLKKVGNFINQGNYKVLIVGHTDNRDAQEKGYNSNWEISSLM 135 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A + ++ + DRI+ G+ + ++D NRRI+I+ Sbjct: 136 AVQLQKYFIEECKIKPDRITAY-GYGSQQPAASNDTPESRQKNRRIEIIFNSD 187 >gi|171322883|ref|ZP_02911587.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] gi|171091749|gb|EDT37280.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] Length = 222 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F + P L K+ T +++ GHTD+ N LS R Sbjct: 116 GDALFATGLATLTPAARASLDKLLSEREDRTYTQVTVIGHTDSV---GNDAANLTLSKRR 172 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 A + L G++ + +SG ++ ++NRR+DI ++ Sbjct: 173 AETVAGYLKSHGLNA-QTVSVSGRGSADPVASNATPDGRASNRRVDISLQR 222 >gi|149377921|ref|ZP_01895649.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter algicola DG893] gi|149357811|gb|EDM46305.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter algicola DG893] Length = 402 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +SS+ ++++ + E + I GH+D+ A N LS RA + Sbjct: 297 FPTNSSVIGNAFDNEIRRVANFMLEYPETNVEIAGHSDSI---GEAEYNRFLSQRRAEAV 353 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 L + G+SEDR++ + G+ ++D + NRR++ ++ R+ Sbjct: 354 ATRLTDALGISEDRVNAV-GYGESEPVASNDTAAGRAENRRVEARIQVRR 402 >gi|77460924|ref|YP_350431.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1] gi|77384927|gb|ABA76440.1| putative OmpA family outer membrane protein [Pseudomonas fluorescens Pf0-1] Length = 237 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 10/146 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 L A GV + I + + F S+ L + Sbjct: 86 YADQQEKKLRASMANTGVEVQRQGDQIKLIM---PGNITFATDSANIASSFYQPLNNLAN 142 Query: 258 VLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + I I G+TD++ + N LS RA S L GVS +S G Sbjct: 143 SLKEFNQNQIEIVGYTDST---GSRQHNMDLSQRRAQSVATYLTSQGVSGANLSA-RGAG 198 Query: 317 HHRLKIASDP--MNSANRRIDILVED 340 ++ + NRR+++ ++ Sbjct: 199 PDNPIASNGDVNGRAQNRRVEVNLKA 224 >gi|119774051|ref|YP_926791.1| OmpA/MotB [Shewanella amazonensis SB2B] gi|119766551|gb|ABL99121.1| OmpA/MotB [Shewanella amazonensis SB2B] Length = 368 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 8/154 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 ++ L A V + F +SS+ P + + Sbjct: 213 DSDNDGVNDDLDKCPATPADHKVDAYGCTVYKDDVTTHNLGSLRFANNSSVINPSSYESV 272 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 +K+ + + I GH N LS RA +A ++L++ G+S +R++ Sbjct: 273 EKLANYMNQHPGSTVEIGGHASNV---GNPDYNMTLSEKRANAAAKLLVEKYGISANRVT 329 Query: 311 KISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 G+ R + + +ANRR++ +V + Sbjct: 330 A-KGYGITRPVMDGNTAEAHAANRRVEAVVTGSE 362 >gi|188992991|ref|YP_001905001.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv. campestris str. B100] gi|167734751|emb|CAP52961.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv. campestris] Length = 431 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 16/123 (13%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD 283 +I++ D+ +FD + P+ VL + L + + +RGHTDA + Sbjct: 316 VITLSDR---ILFDFDKAAIRPDAARVLDTLAAALGKVSVAQMEVRGHTDA---KGGDDY 369 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------DP-MNSANRRIDI 336 N LS RA + L G ++ + G+ + + +P NRR+++ Sbjct: 370 NQALSERRANAVLAALRTRGTAQS--ASAKGYGESQPLAPNTVKGQDNPGGRQLNRRVEL 427 Query: 337 LVE 339 + Sbjct: 428 FLR 430 >gi|94311184|ref|YP_584394.1| OmpA/MotB [Cupriavidus metallidurans CH34] gi|93355036|gb|ABF09125.1| putative outer membrane lipoprotein [Cupriavidus metallidurans CH34] Length = 167 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 7/111 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290 + +F E L ++ L + + + + GHTD N +LS+ Sbjct: 59 PDKVLFGFDDDTVSAEQQNALARVARTLRDAGIDALRVDGHTDNV---GTIEYNQQLSMR 115 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 RA + +VL+ G + D + + GF R + + NRR+ I+V Sbjct: 116 RAEAVARVLLTCGFARDHLD-VRGFGKTRPIADNGTALGRAENRRVAIIVT 165 >gi|326799502|ref|YP_004317321.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] gi|326550266|gb|ADZ78651.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] Length = 647 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 67/204 (32%), Gaps = 20/204 (9%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS--------TLS 204 + D S+ E+ L + E + + ++ + + + Sbjct: 447 DKETEEPLADANVSLLDEQGTLLAKKTSESAGRFEFEVDVEQAYQVLGEKVGYIADSAFT 506 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 N V + + + +D + V+L + +++ + Sbjct: 507 NTNGLNPGDTVKVALYLDQLKQGKTFRLDNIYYDFDKFNIRKDAAVILDGLVKIMKDNPT 566 Query: 265 -VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I + HTD+ + N LS RA +A L+ G++ DR+ G+ +L Sbjct: 567 LKIELSSHTDSR---GRDKYNMTLSQKRAQAAVDYLVSRGIARDRMIA-KGYGESKLLNR 622 Query: 324 -------SDPMNSANRRIDILVED 340 S+ + NRR + V + Sbjct: 623 CANGIKCSEAEHQLNRRTEFTVLE 646 >gi|325274366|ref|ZP_08140461.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] gi|324100500|gb|EGB98251.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] Length = 163 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287 D +F ++ ++++IG+ L + + + GHTD+ A N L Sbjct: 52 YDLSGKVLFGSDLDSLNSQSQAIVERIGKALLGVGIQRVRVDGHTDS---SGKAAYNQEL 108 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 S RA S + L+ G+ I G + + NRR+ I+V Sbjct: 109 SERRAQSVAKALVGVGMQPQNIQS-QGLGSSQPVADNRTSAGRTENRRVSIVV 160 >gi|315637079|ref|ZP_07892302.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315478615|gb|EFU69325.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 854 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 5/110 (4%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 +F+ +S++ ET + L + E +I GH P A N +LS RA Sbjct: 747 VLFENNSAVIKEETKGKVLSFARYLVDNKEFNTIIEGHASKDPTA-SAAHNQKLSEQRAS 805 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + +L+ +GV RI I G H+ + NRRID ++ + Sbjct: 806 AIKNLLISNGVEASRIQSI-GKGHNEPIADNSTAEGQALNRRIDAILIRK 854 >gi|262360905|gb|ACY57626.1| hypothetical protein YPD4_0717 [Yersinia pestis D106004] Length = 208 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + +L + I + GHTD A+ N LSL Sbjct: 73 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 129 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + L S VS + G+ R +D + NRR++I + Sbjct: 130 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 179 >gi|163739042|ref|ZP_02146455.1| OmpA family protein [Phaeobacter gallaeciensis BS107] gi|161387847|gb|EDQ12203.1| OmpA family protein [Phaeobacter gallaeciensis BS107] Length = 183 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 11/139 (7%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + V + I + F + L++ + Sbjct: 50 VMDDGAEGFMTPHVTRDGKPVCRRGDICGVMPSDQFFATNRHRISAAGQQRLREFFQTAN 109 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + I GHTD+ N RLS RA + +V G RI + G+ Sbjct: 110 ARS--FIITGHTDSR---ASDEYNMRLSQRRANAVAKVGQSVG---ARILEARGYGERDP 161 Query: 321 KIASDPMN--SANRRIDIL 337 ++ +D + NRR++I+ Sbjct: 162 RVPNDSAANMAQNRRVEII 180 >gi|163788754|ref|ZP_02183199.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteriales bacterium ALC-1] gi|159875991|gb|EDP70050.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteriales bacterium ALC-1] Length = 636 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 11/109 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 N FD S + L+ I +V+ +I I HTD+ + N +LS R Sbjct: 521 NPIFFDFDKSKIRTDAQYELENIVDVMRRHKSMIIKIESHTDSR---GRDKYNLKLSDRR 577 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRR 333 A S L+ GV +RI G+ +L ++ + NRR Sbjct: 578 AKSTRDYLISRGVEANRIESAIGYGETQLLNNCGNRVKCTEEEHQVNRR 626 >gi|114765063|ref|ZP_01444210.1| Possible outer membrane protein, OmpA family [Pelagibaca bermudensis HTCC2601] gi|114542610|gb|EAU45635.1| Possible outer membrane protein, OmpA family [Roseovarius sp. HTCC2601] Length = 452 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 8/130 (6%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDAS 275 + + +I +F + + ++ I +V+ + E I + GHTD+ Sbjct: 323 REDVSLAVVVIQATQPEVFRSAKADINDVYSPLVGSIAQVIRDNIEFIGAVRVVGHTDSI 382 Query: 276 PF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331 P N R N LS RA + +L GV + + G A + + N Sbjct: 383 PVQTSNPFRSNQGLSEARAKTIADMLRAQGVPAE-LVSSEGRAAEDPIADNGTRDGRARN 441 Query: 332 RRIDILVEDR 341 RR++++++ + Sbjct: 442 RRVEVILQKK 451 >gi|91776742|ref|YP_546498.1| OmpA/MotB [Methylobacillus flagellatus KT] gi|91710729|gb|ABE50657.1| OmpA/MotB [Methylobacillus flagellatus KT] Length = 1402 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 9/130 (6%) Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275 +L +++ F+ + ++ L+++ L I I GHTD Sbjct: 96 VPQAEPQVLTRLVENSGAAQFESGKADLTDSSVAALEQLAAQLQGKKNVRIDIAGHTDNQ 155 Query: 276 PFRNIAR----DNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN-- 328 AR DN LS R+ + L K G+ + ++ ISG+ + ++D Sbjct: 156 RLSPNARKIFRDNQGLSEARSLAVAAFLKQKLGLEDSQL-SISGYGESQPVTSNDTPEGM 214 Query: 329 SANRRIDILV 338 + NRR+ I V Sbjct: 215 AQNRRVIIRV 224 >gi|307727249|ref|YP_003910462.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003] gi|307587774|gb|ADN61171.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003] Length = 219 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 67/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +K+++ K + L+G +A R ++ I + Sbjct: 46 ELSNKLEQEVKQRQLETQRRKTLEEALAGPLAAG----------RVTLVNGRIGISGNVL 95 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S P+ +L+ + L + E++ + G TD R DNW LS Sbjct: 96 FALNSDQLQPQGRDLLKSLAGPLSAYLRANDEMLMVSGFTDDQRLREGNRRFADNWELSA 155 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ +GV + + F + ++ + + NRR++I Sbjct: 156 QRALTVTRALIDAGVPVSSVFAAA-FGSGQPVSSNADEQGRARNRRVEI 203 >gi|229592593|ref|YP_002874712.1| putative lipoprotein [Pseudomonas fluorescens SBW25] gi|229364459|emb|CAY52284.1| putative putative lipoprotein [Pseudomonas fluorescens SBW25] Length = 163 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +F + ++Q+IG+ L E + I GHTDA N +LSL R Sbjct: 56 GKVLFGSDVEALNQPSTDIVQRIGKALLGVGIERVRIDGHTDA---SGKETYNQQLSLRR 112 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 A S VLM G+ E+ I ++ G ++D NRR+ I+V Sbjct: 113 AKSVATVLMSVGMKEENI-QLRGLGSSEPVASNDTAAGRTENRRVSIVVMSD 163 >gi|329893686|ref|ZP_08269820.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma proteobacterium IMCC3088] gi|328923613|gb|EGG30925.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma proteobacterium IMCC3088] Length = 182 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 6/123 (4%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS 275 + + F+ SS VL K +L ++ + + GHTD Sbjct: 63 QVAAELRRLQDDARMAGSVVYFEFDSSTLTDTGRAVLDKHVALLKNTGASVRLEGHTDER 122 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 N L RA + +M G+ R+ IS F + +S+ S NRR Sbjct: 123 ---GTREYNMALGERRANAVRDYMMVKGIPGYRLESIS-FGEEKPVSYGSSEVSWSQNRR 178 Query: 334 IDI 336 ++I Sbjct: 179 VEI 181 >gi|300693692|ref|YP_003749665.1| outer membrane protein; ompa/motb domain [Ralstonia solanacearum PSI07] gi|299075729|emb|CBJ35033.1| putative outer membrane protein; OmpA/MotB domain [Ralstonia solanacearum PSI07] Length = 280 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 74/246 (30%), Gaps = 12/246 (4%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 D + T + G + + + + + Sbjct: 37 PGDPAPASAATPVPGQVVAGGMVPDEATKASVLARLRELYGSANVVDQIEVGNVVSPPNW 96 Query: 157 LC---KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 K + + ++ + + Q LA +++TL Sbjct: 97 TGNVQKILSPQIKQVNRGQLNIDGTQVAMHGDVQNEAQRQQLASDMATTLGASYTIKNGL 156 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272 V + ++ + ++ ++ F+ S+ P+ +L ++ VL I GHT Sbjct: 157 RVAAVSEQSLLDQTLANRIIE--FETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHT 214 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA 330 D N LS RA + L+ G ++ I G + A+ D S Sbjct: 215 DN---SGSRAMNLNLSQTRAETVKNYLISKGAEPGTLTAI-GVGPDQPVAANTTDEGRSR 270 Query: 331 NRRIDI 336 NRRI+ Sbjct: 271 NRRIEF 276 >gi|327402922|ref|YP_004343760.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327318430|gb|AEA42922.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 321 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 88/223 (39%), Gaps = 10/223 (4%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + + + + + ++S + + + +++ + + +S + L Sbjct: 91 SQNEVYEQKLDQMRMKGQKESANYQADIDSKNQELQRKEDALKTLESELIAKEKLLIERE 150 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + KR D K++ + +S + KG+ I +S+ +F Sbjct: 151 ERVTELEEMIKRKDDAMKQLKTRVSAALKGFENKGLTVVEKNGKIYVSL---EAKLLFAS 207 Query: 240 SSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAY 296 S+ E L + +VL I + GHTD + A + NW LS+ R+ + Sbjct: 208 GSTTVEAEGKKALVDLAKVLENEKDLEIIVEGHTDTDKLASTAHPKSNWELSVLRSTAVV 267 Query: 297 QVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 ++++ S ++ ++ G + A D + NRRI++++ Sbjct: 268 EIMIGNSKMNPMQLMAA-GRGEYHPVDAKD--KAKNRRIEVII 307 >gi|115353202|ref|YP_775041.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD] gi|115283190|gb|ABI88707.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 243 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 27/223 (12%), Positives = 64/223 (28%), Gaps = 7/223 (3%) Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 Q + QQ + + + + + + Sbjct: 24 ATQSGPTYTVRAIKATDQQGPVFRVTCEGLVSSTRSCEAAAQKVCAGKPVTPLQAVDRVR 83 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 ++ ++++ V V + + + + + F Sbjct: 84 GGAAMGDPRELTFMCGVPPQASVAPPVVAQPQPVVQAQPAAEPVAQRHVLLQGSANFAFD 143 Query: 241 SSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ P L + +V +++ G+TD+ N RLS RA + L Sbjct: 144 SAALTPSARQELDRFLDVNREARFRRVTVTGYTDSQ---GAHAHNVRLSEARARAVATYL 200 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 G+ + + + G ++ + NRR++I +E Sbjct: 201 RTGGLHAEHFTTV-GKGAAEPVASNATAEGRAQNRRVEIELEK 242 >gi|262275459|ref|ZP_06053269.1| lipoprotein precursor OmpA family [Grimontia hollisae CIP 101886] gi|262220704|gb|EEY72019.1| lipoprotein precursor OmpA family [Grimontia hollisae CIP 101886] Length = 223 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + P +L I + + S+ ++I GHTD+ N L L RA S Sbjct: 114 FGFDKASLTPTGKKILAGIVDSITTSSTPLTITGHTDSV---GSHAYNLTLGLKRAESVK 170 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L+ +G + +I +S + ++ + NRR+D++ Sbjct: 171 GYLVDAGKNNAQIKTVSA-GETKPVTTNETAKGRAENRRVDVV 212 >gi|312959042|ref|ZP_07773561.1| OmpA/MotB [Pseudomonas fluorescens WH6] gi|311286812|gb|EFQ65374.1| OmpA/MotB [Pseudomonas fluorescens WH6] Length = 256 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 45/140 (32%), Gaps = 10/140 (7%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L GV + I + + F +S L + L Sbjct: 89 DQQEKKLRESMANTGVEVQRQGDQIKLIM---PGNITFATNSDAISSSFYQPLNNLANSL 145 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L GV+ +S G Sbjct: 146 KQFNQNTIQIVGYTDST---GSRQLNMDLSQRRAQSVANYLTSQGVNGANLSA-RGAGPD 201 Query: 319 RLKIASDP--MNSANRRIDI 336 ++ + NRR+++ Sbjct: 202 NPIASNADVNGRAQNRRVEV 221 >gi|320093629|ref|ZP_08025513.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp. oral taxon 178 str. F0338] gi|319979417|gb|EFW10895.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp. oral taxon 178 str. F0338] Length = 402 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 14/116 (12%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ +FD S + L K+ VL + + GHTD+ N LS Sbjct: 289 DDSVLFDFGESTVRADAADTLAKLASVLTDAGAPTAHVYGHTDSV---GDDASNQTLSEQ 345 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILV 338 RA + L K+G + GF + + ANRR++I + Sbjct: 346 RAKAVVDELKKNGATTA--LDWKGFGETQPIAPNTNDDGSDNPAGRQANRRVEIYI 399 >gi|71907808|ref|YP_285395.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71847429|gb|AAZ46925.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 261 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ ++ P V+L ++ + + GHTD+ + N LSL RA S Sbjct: 158 FEVGAATLTPAGRVILDEMYAAIKQIGTPKVQVIGHTDS---SGSRQANIALSLSRANSV 214 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 L++ G+ D ++ + G + ++D + NRRI+ + Sbjct: 215 RSYLIEKGLPADGLTAV-GSGPDQPVGSNDSSEGRAKNRRIEFKL 258 >gi|83748126|ref|ZP_00945154.1| Hypothetical Protein RRSL_01752 [Ralstonia solanacearum UW551] gi|207739125|ref|YP_002257518.1| outer membrane protein [Ralstonia solanacearum IPO1609] gi|83725208|gb|EAP72358.1| Hypothetical Protein RRSL_01752 [Ralstonia solanacearum UW551] gi|206592498|emb|CAQ59404.1| outer membrane protein [Ralstonia solanacearum IPO1609] Length = 277 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 74/246 (30%), Gaps = 12/246 (4%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 D ++ + G + + + + + Sbjct: 34 PGDPALATTANPVPGQVVAGGMVPDEATKASVLARLRELYGSANVVDQIEVGNVVSPPNW 93 Query: 157 LC---KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 K + + ++ + + Q LA +++TL Sbjct: 94 TGNVQKILSPQIKQVNRGQLNIDGTQVAVHGDVQNEAQRQQLASDMATTLGASYTIKNGL 153 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272 V + ++ + ++ ++ F+ S+ P+ +L ++ VL I GHT Sbjct: 154 RVAAVSEQSLLDQTLANRIIE--FETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHT 211 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA 330 D N LS RA + L+ G ++ I G + A+ D S Sbjct: 212 DN---SGSRAMNLNLSQARAETVKSYLINKGAEPGTLTAI-GVGPDQPVAANTTDEGRSR 267 Query: 331 NRRIDI 336 NRRI+ Sbjct: 268 NRRIEF 273 >gi|323700864|ref|ZP_08112776.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132] gi|323460796|gb|EGB16661.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132] Length = 392 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 78/263 (29%), Gaps = 15/263 (5%) Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 D + S ++D+ T+ L+ S Q+ + + + Sbjct: 130 DGTTLDDSSVTIQVDVFAAGSGTRLWTMLQSASIEQRDPEDFIYFVHETRMSHSPFDQII 189 Query: 145 NSLTRDSE---KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 ++ RD K + E + Q ++ Sbjct: 190 RAIARDMAVPLKAWLPDPDATYPYASTPEAVKAGLEAGPSATAQGRDLPPEQTAGTPAAA 249 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 V + E IS +D FD + P ++ VL +GE L Sbjct: 250 PAGQPVQGAAARKEPAEDEAPRPGISGVDLNIQ--FDFDKATIQPASLAVLDALGETLNS 307 Query: 262 STEV---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317 I + GHTDA A N LS RA + L+ ++ D I + GF Sbjct: 308 PEFKGRSIIVGGHTDA---SGGAEYNLTLSKQRAEAVKSYLVDKWHINPDLIEAV-GFGK 363 Query: 318 HRLKIASDPMN--SANRRIDILV 338 R NRR++I + Sbjct: 364 SRPLTEGTTAADQQRNRRVEIRL 386 >gi|228910334|ref|ZP_04074150.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200] gi|229032155|ref|ZP_04188131.1| OmpA/MotB domain protein [Bacillus cereus AH1271] gi|228729161|gb|EEL80161.1| OmpA/MotB domain protein [Bacillus cereus AH1271] gi|228849286|gb|EEM94124.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200] Length = 123 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 +FD + E++ + +++ +L + S I++ GHTD P N NW LS Sbjct: 6 ENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNWELSTQ 65 Query: 291 RAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 RA + QVL+++ + ++ S I G+ +R +D + NRR+++ + Sbjct: 66 RAVNFMQVLLQNKELQPEKFSAI-GYGEYRSIAPNDTQEGKAKNRRVEVFIL 116 >gi|317153383|ref|YP_004121431.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943634|gb|ADU62685.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 254 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 85/253 (33%), Gaps = 8/253 (3%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 ++ ++ + + + D + F++ +E + Sbjct: 2 ARKAEEVVQRKPLREPPRDEGLPPWMATFADMMTLLLCFFVLLLSFAEQSEEKYRDALGS 61 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 K +L + + SKE + + +RL +L + + Sbjct: 62 LKGAFGVRELRTVSDDMAPFNTSQSSKELMAKISTDERLLLGVVMRIKSLMEDEDIKLKE 121 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 G R G+ I + +F ++ + VL K+ VL + +RGHTD Sbjct: 122 GTGVAADRDGV---IFSADSAMLFAPGTADLAADADTVLDKVVTVLKDYNLSLVVRGHTD 178 Query: 274 ASPFRN-IARDNWRLSLDRAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 P NW LS RA A L +SG+ R + G+A R +D + Sbjct: 179 DRPISTLKFPSNWELSSARAAVALDYILRESGIGISRAKAV-GYADTRPAAPNDSDENRL 237 Query: 331 -NRRIDILVEDRQ 342 N+R++ + Q Sbjct: 238 KNQRVEFYLHMPQ 250 Score = 37.6 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 14/33 (42%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTV 43 + ++ +K + L W +AD MT+ Sbjct: 4 KAEEVVQRKPLREPPRDEGLPPWMATFADMMTL 36 >gi|157960752|ref|YP_001500786.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC 700345] gi|157845752|gb|ABV86251.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345] Length = 356 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 9/118 (7%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + T +FD SS L + E L + +I+G+TD++ A N Sbjct: 236 VVFPALTVTSLFDFDSSELTNS--DSLTAVIERLNQVPTAIANIKGYTDST---GAAAYN 290 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 LS RA + L+ +G+ ++I ++ GF + +D NRR+ I ++ Sbjct: 291 QALSERRAQAVADDLIAAGIKPEQI-EVHGFGEQFPVMKNDTSEHRHENRRVLIHIQS 347 >gi|307293378|ref|ZP_07573224.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1] gi|306881444|gb|EFN12660.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1] Length = 291 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 34/279 (12%), Positives = 71/279 (25%), Gaps = 8/279 (2%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 + S + P S+ + I S + Q Sbjct: 13 MIALLSGAASGSLSAQTQDAPAAPSADVSATAYLPAEKVAGPEIKGIISARSGDKMQVTA 72 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + ++ + +T L + + Sbjct: 73 ADGSKSVIQIDDATKISASKGLFGLNRSKLAATSLLNGLPVTVKTLQTGGGLLASQINLQ 132 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 K L+ A I + + + I + FD ++ + Sbjct: 133 NKDLK-TASMIHNGTAQGFEEQTAATAALRGRMGEIDQYNVKSTTNVNFDTGKAVLSAQA 191 Query: 249 IVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSE 306 L + + + G+TD++ N LS RA L ++ G Sbjct: 192 KNDLCATASTAEGMSNALLLVVGYTDST---GGDEFNQELSEKRAGRVVNYLQQACGWKP 248 Query: 307 DRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343 R+ +G A ++D + NRR+ + + +G Sbjct: 249 YRMLTPTGMAKADPLASNDTAEGKAQNRRVAVNILVSKG 287 >gi|145588679|ref|YP_001155276.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047085|gb|ABP33712.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 187 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 7/106 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 ++D + S PE L KI L+ + I G+TD+ N L RA S Sbjct: 81 LYDFNKSDLKPEGKATLDKIAADLSKIKLEVIIAVGNTDSV---GTDAYNMALGQRRAQS 137 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 L+ GV RI ++ + NRR DI V Sbjct: 138 VKTYLVSKGVDASRIYT-ESKGKSNPVASNATAEGRAKNRRTDIEV 182 >gi|326563483|gb|EGE13746.1| OmpA family protein [Moraxella catarrhalis 103P14B1] gi|326572976|gb|EGE22955.1| OmpA family protein [Moraxella catarrhalis CO72] gi|326573791|gb|EGE23748.1| OmpA family protein [Moraxella catarrhalis 101P30B1] Length = 551 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 8/154 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + D+ ++ ++ + G E ILI+ + F S+ E Sbjct: 380 EAEPELDINTAVADSIETARVAIVALGDTVEENEMDILINAL-NTQIINFALDSTEIPQE 438 Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L E L E I GHTD N LS RA + + L+ GV+ Sbjct: 439 NKEILDLAAEKLKAVPETTLRIIGHTDTQ---GTHEYNQDLSESRAAAVKEYLVSKGVAA 495 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +R++ G + ++ NRRI+ ++ Sbjct: 496 ERLNT-QGASFDYPVASNATEQGRFQNRRIEFVL 528 >gi|313677086|ref|YP_004055082.1| membrane protein [Marivirga tractuosa DSM 4126] gi|312943784|gb|ADR22974.1| putative membrane protein [Marivirga tractuosa DSM 4126] Length = 504 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 10/202 (4%) Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 T+ ++K L + DL + +S K L + ++K + + I S+ Sbjct: 306 GTQIAQKNFSLGFAVDLHLENAAQMASTEFSVSIFKRLPITKQKEVANDEYAIGSSREFE 365 Query: 207 VADNIVKGVLFETTRTGILISI---IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + V +S + R + + + E L I ++ + Sbjct: 366 DDNFQDQPVKVIEKEYQTSVSRDFSFELRKNFNYGFNETNLNDEAKSYLDDIAVMMEANP 425 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GHTD N ++S +RA L G++ +R+ G Sbjct: 426 ALKLKVTGHTDNI---GTEDANQKISEERAKGVRDYLESIGIAAERL-SYEGKGATAPLY 481 Query: 323 ASDPM--NSANRRIDILVEDRQ 342 ++ + NRR++ L+ + Sbjct: 482 KNNTEENRAKNRRVEFLIYAEK 503 >gi|304397112|ref|ZP_07378991.1| OmpA domain protein transmembrane region-containing protein [Pantoea sp. aB] gi|304355261|gb|EFM19629.1| OmpA domain protein transmembrane region-containing protein [Pantoea sp. aB] Length = 356 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L+ + + G TD + N +LS Sbjct: 228 KSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRI---GSEQYNQKLS 284 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSAN---------RRIDIL 337 RA S L+ G+ ++IS G + D + N RR++I Sbjct: 285 EKRAQSVVDYLVSKGIPSNKISA-RGMGKSNPVTGNTCDSVKGRNALIDCLSPDRRVEID 343 Query: 338 VED 340 V+ Sbjct: 344 VKG 346 >gi|120436189|ref|YP_861875.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] gi|117578339|emb|CAL66808.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] Length = 620 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 86/255 (33%), Gaps = 12/255 (4%) Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 +N E + N D + + + + Q ++ Sbjct: 363 GIENLGEPVNSNMDDFAYFQVSDSKEGYISTNREGGSDDIFVFNKLNPLILKGQVTDAVN 422 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 S + ++ EE + ++++K ++ K+ + + ST+ Sbjct: 423 GSPIAAATVRLMDENKKEIAFLETDEEGNYETEIARDKKFPVEAKEIEYETFEGEISTMD 482 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 + ++ + + + + + + FD S P+ L K+ ++ Sbjct: 483 SDEKEEMIYDIELSPVKD---VEYLAEIDNIYFDFDKSNIRPDAATELDKLVALMKDEYP 539 Query: 265 VISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I HTD N +L+ RA S Y L+ G+SEDRI + G+ + I Sbjct: 540 ELVIEIGSHTDRR---GTNSYNEKLAERRAKSTYDYLVSKGISEDRIVEFKGYGETKPAI 596 Query: 323 A----SDPMNSANRR 333 S+ + NRR Sbjct: 597 DCDRCSEKDHQLNRR 611 >gi|23015570|ref|ZP_00055342.1| COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Magnetospirillum magnetotacticum MS-1] Length = 161 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + FD S + L K L ++ GH D N L R Sbjct: 56 DRVFFDFDKSSLRADAKATLDKQAAWLKAYPNYSLTVEGHADER---GTREYNLALGEKR 112 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A S + L +GV+ R+ +S + R +++ S NRR Sbjct: 113 ANSVAEYLKAAGVAAARVKTVS-YGKERPVALGSNEAAWSQNRR 155 >gi|325525950|gb|EGD03642.1| putative OmpA/MotB family outer membrane protein [Burkholderia sp. TJI49] Length = 405 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 9/157 (5%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 ++ +R+ L + V +++ R MF + P Sbjct: 251 RQAQRMSPFDSLARDLEQRLRDEVAAGNVELIRDPGRHALTL---RFVGMFVPGAVTVAP 307 Query: 247 ETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG 303 V+ G +A E +R G+ D++P + + N LS RA + ++L+ +G Sbjct: 308 WGASVVASAGREIASIAEGTVVRVVGYADSAPAGSARQVSNQALSEARAENVARILVAAG 367 Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + + ++ G + + NRR++++V Sbjct: 368 IPAHGL-RVEGRGDADALADNGTESGRARNRRVEVIV 403 >gi|260425871|ref|ZP_05779850.1| OmpA family protein [Citreicella sp. SE45] gi|260420363|gb|EEX13614.1| OmpA family protein [Citreicella sp. SE45] Length = 203 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 10/103 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F S P+ +++ + I GHTDA N RLS +RA S Sbjct: 106 FATDSYAISPQGQARIREFFR--NATAFGFIITGHTDAR---ASDAYNRRLSYNRANSVA 160 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 +V +G RI + G+ + + NRR++IL Sbjct: 161 RVARSAG---ARIVDVRGYGESYPVATNSTAEGMARNRRVEIL 200 >gi|197116693|ref|YP_002137120.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem] gi|197086053|gb|ACH37324.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem] Length = 204 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 41/117 (35%), Gaps = 7/117 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 S D T FD SS+ L E L I G+TD N Sbjct: 92 SQADALETIYFDFDSSLLSDTARATLAANLEKLKAKPGAALRIEGNTDER---GSDDYNL 148 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 LS RA SA + L G ++ + G+ + + + + NRR + ++ Sbjct: 149 ALSERRAQSAKKYLQALGFPASKL-SVVGYGEEKPAVKGEGEEIWAKNRRDEFVIVR 204 >gi|33596991|ref|NP_884634.1| putative lipoprotein [Bordetella parapertussis 12822] gi|33566442|emb|CAE37695.1| putative lipoprotein [Bordetella parapertussis] Length = 200 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 16/136 (11%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRG 270 +GV + + I+++ +FD + L LQ I +++ T +++I G Sbjct: 69 HEGVSVRQGKDAVTIAMM---GDVLFDFDKADILAAAEPTLQDIAKLIKSPATGIVAIEG 125 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--------I 322 HTD+ + N LSL RA + Q L GV ++ + G R Sbjct: 126 HTDS---KGSDSYNKGLSLRRAQAVAQWLGAHGVDAAKL-SVRGLGAARPVQPNQLANGA 181 Query: 323 ASDPMNSANRRIDILV 338 + + NRR++ ++ Sbjct: 182 DNPQGRAQNRRVEFVL 197 >gi|325286203|ref|YP_004261993.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324321657|gb|ADY29122.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 276 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 96/241 (39%), Gaps = 9/241 (3%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS-QQSEHCKNSLTRDSEKGKDLCKSTDL 163 + + + K T + + LE + N+LT D++ + Sbjct: 25 ELQQAHGETKSQLTKTAVEKEELEAKFAKIEARVADYNSKINALTEDNDAKLISADGAVI 84 Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 ++ + L +S E+++ K K +LA +S L + N + Sbjct: 85 SNNVKAKMRETLKNVSPEQLMGAKTLKDSMNLA--LSHNLKKSIGTNSLNEDEDIAIDID 142 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR 282 + +I + +F+ +S + +LQK+ +V+ + + + GHTD+ Sbjct: 143 DTVVMISISDKLLFNTASYNVSNKADAILQKLADVINSEPSIEVMVEGHTDSRSISTPKV 202 Query: 283 -DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 DNW LS+ RA S + L K V+ +++ SG + + ++D + NRR I++ Sbjct: 203 TDNWDLSVLRATSIVRKLQTKYNVAPEKLIA-SGRSSYVPLASNDTKEDRAKNRRTRIVI 261 Query: 339 E 339 Sbjct: 262 L 262 >gi|300313671|ref|YP_003777763.1| OmpA family protein [Herbaspirillum seropedicae SmR1] gi|300076456|gb|ADJ65855.1| OmpA family protein [Herbaspirillum seropedicae SmR1] Length = 241 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + FD + PE VL + L + ++I GHTD + N LSL Sbjct: 107 PSDISFDTGRADIKPEMRPVLDRFAATLVENPATTVTIVGHTDNT---GSDAINDPLSLQ 163 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA L GV+ +R I G H +A+ D + NRR++I V Sbjct: 164 RASRTRDYLSSRGVAANRF-SIQGRGSHEPLVANTSDANRARNRRVEIFV 212 >gi|145299366|ref|YP_001142207.1| OmpA family protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142852138|gb|ABO90459.1| OmpA family protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 162 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 7/114 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLS 288 D N +F S P+T V+++K+G L I GHTD+ N +LS Sbjct: 52 DFSNRVLFANDSEALNPDTRVLVEKLGMTLLGVGLNKARIDGHTDS---NGPEAYNDQLS 108 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 L RA S VL+ G+ + I G + + NRR+ I++ + Sbjct: 109 LKRAKSVADVLVPVGMQPANLD-IRGRGERDPVADNKTAAGRAENRRVGIIISN 161 >gi|294139179|ref|YP_003555157.1| OmpA family protein [Shewanella violacea DSS12] gi|6141577|dbj|BAA85891.1| unnamed protein product [Shewanella violacea] gi|293325648|dbj|BAJ00379.1| OmpA family protein [Shewanella violacea DSS12] Length = 220 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 49/144 (34%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N F P VL + Sbjct: 80 YMDVQEAELRKQLRSTGVSVTRSGDNIVLNM---PNEVTFGVDEVHLNPGAKNVLNSVAL 136 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V I+I G+TD+ N RLS RA L+ V R+ G Sbjct: 137 VAKEYDNTQINILGYTDS---SGSESYNLRLSKVRAVEVADYLISQKVEYARVRS-EGIG 192 Query: 317 HHRLKIASDPMNSA--NRRIDILV 338 R ++ NRR++I++ Sbjct: 193 EARPIASNSTAQGRTQNRRVEIIL 216 >gi|326571329|gb|EGE21346.1| OmpA family protein [Moraxella catarrhalis BC8] Length = 551 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 8/154 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + D+ ++ ++ + G E ILI+ + F S+ E Sbjct: 380 EAEPELDINTAVADSIETARVAIVALGDTVEENEMDILINAL-NTQVINFALDSTEIPQE 438 Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L E L E I GHTD N LS RA + + L+ GV+ Sbjct: 439 NKEILDLAAEKLKAVPETTLRIIGHTDTQ---GTHEYNQDLSESRAAAVKEYLVSKGVAA 495 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +R++ G + ++ NRRI+ ++ Sbjct: 496 ERLNT-QGASFDYPVASNATEQGRFQNRRIEFVL 528 >gi|309779564|ref|ZP_07674325.1| OmpA family protein [Ralstonia sp. 5_7_47FAA] gi|308921805|gb|EFP67441.1| OmpA family protein [Ralstonia sp. 5_7_47FAA] Length = 217 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +K+++ K + L+G +A R ++ I + Sbjct: 43 ELSSKLENEVKQREAEAQRRKTLEQALAGPLAAG----------RVTLVNGRIGINGNVL 92 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S PE +++ + LA E++ + G +D R DNW LS Sbjct: 93 FAINSDQLQPEGRALMKSLAGPLAAYLTSREEILMVSGFSDDQQVRAGNRLFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L+ G+ + + F + ++ D + NRR++I Sbjct: 153 KRALTVTRALIDEGIPASSVFAAA-FGSQQPVSSNADDVGRAKNRRVEI 200 >gi|296113686|ref|YP_003627624.1| OmpA family protein [Moraxella catarrhalis RH4] gi|295921380|gb|ADG61731.1| OmpA family protein [Moraxella catarrhalis RH4] Length = 551 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 8/154 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + D+ ++ ++ + G E ILI+ + F S+ E Sbjct: 380 EAEPELDINTAVADSIETARVAIVALGDTVEENEMDILINAL-NTQIINFALDSTEIPQE 438 Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L E L E I GHTD N LS RA + + L+ GV+ Sbjct: 439 NKEILDLAAEKLKAVPETTLRIIGHTDTQ---GTHEYNQDLSESRAAAVKEYLVSKGVAA 495 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +R++ G + ++ NRRI+ ++ Sbjct: 496 ERLNT-QGASFDYPVASNATEQGRFQNRRIEFVL 528 >gi|227115434|ref|ZP_03829090.1| putative porin [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 505 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 11/153 (7%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + R + LAK + + T G++ + D MFD +S+ + Sbjct: 78 QNREEALAKIAQEENIAMTTRALQSQEKSGTETVGLVAQVQDS---GMFDTNSAQLSTDG 134 Query: 249 IVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + ++KI + + VI + GHTDA+ A N RLS RA + +VL ++G+S Sbjct: 135 LRQVKKIATAMKEGDQSGVILVVGHTDAT---GSAEWNQRLSEQRAQNVGRVLEQAGLSA 191 Query: 307 DRISKISGFAHHRLKIASD--PMNSANRRIDIL 337 ++ G R + +ANRR++I+ Sbjct: 192 QKLY-FQGAGSARPVADNATVTGRTANRRVEIV 223 >gi|304312214|ref|YP_003811812.1| hypothetical protein HDN1F_25860 [gamma proteobacterium HdN1] gi|301797947|emb|CBL46169.1| Hypothetical protein HDN1F_25860 [gamma proteobacterium HdN1] Length = 222 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 12/152 (7%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 Q +A +++ L + + V E I+I I + F +++ P+ + VL Sbjct: 77 QQVAVRVALALKAPIERGL---VEVEAVGRYIVIRIPEAT---CFPTNAATLRPQCLPVL 130 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARD-NWRLSLDRAYSA-YQVLMKSGVSEDRI 309 I L + ++ GH+D P NW + RA + ++L +G S D Sbjct: 131 VTIRSALQGLEKARYTVAGHSDDVPINTARYSSNWEFAAARAGAVLVELLKATGFSADHF 190 Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVE 339 + S + R +A+ + NRR++++VE Sbjct: 191 TLAS-YGPTRPLVANTSADNRARNRRVEVVVE 221 >gi|226940371|ref|YP_002795445.1| Outer membrane protein A [Laribacter hongkongensis HLHK9] gi|226715298|gb|ACO74436.1| Outer membrane protein A [Laribacter hongkongensis HLHK9] Length = 226 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 16/154 (10%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ +D +++++ + + + + IL+++ Q FD +S+ P Sbjct: 81 DRQARDFQRQLATQIRD------GQIFVVKRADNSILVTMTSQTA---FDTNSASLKPGF 131 Query: 249 IVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + + I ++ + I GHTD++ R N LS +RA + L+ V Sbjct: 132 MPTINTISRIVNQYGKTTLDITGHTDST---GNDRINVPLSQNRAAAVQNALLSRNVHPQ 188 Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 R+S G + + ++ NRR++IL+E Sbjct: 189 RLSAY-GMGASQPRASNASEAGRQLNRRVEILIE 221 >gi|326562428|gb|EGE12747.1| OmpA family protein [Moraxella catarrhalis 7169] gi|326562797|gb|EGE13092.1| OmpA family protein [Moraxella catarrhalis 46P47B1] gi|326569136|gb|EGE19198.1| OmpA family protein [Moraxella catarrhalis BC1] gi|326570622|gb|EGE20658.1| OmpA family protein [Moraxella catarrhalis BC7] gi|326574786|gb|EGE24720.1| OmpA family protein [Moraxella catarrhalis O35E] Length = 551 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 8/154 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + D+ ++ ++ + G E ILI+ + F S+ E Sbjct: 380 EAEPELDINTAVADSIETARVAIVALGDTVEENEMDILINAL-NTQIINFALDSTEIPQE 438 Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L E L E I GHTD N LS RA + + L+ GV+ Sbjct: 439 NKEILDLAAEKLKAVPETTLRIIGHTDTQ---GTHEYNQDLSESRAAAVKEYLVSKGVAA 495 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +R++ G + ++ NRRI+ ++ Sbjct: 496 ERLNT-QGASFDYPVASNATEQGRFQNRRIEFVL 528 >gi|298208824|ref|YP_003717003.1| putative flagellar motor protein MotB [Croceibacter atlanticus HTCC2559] gi|83848751|gb|EAP86620.1| putative flagellar motor protein MotB [Croceibacter atlanticus HTCC2559] Length = 280 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 89/237 (37%), Gaps = 10/237 (4%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 N+ + +K++ Q N+I + ++ D++ + E Sbjct: 34 NTRSTLTKTQVEKEELQAKYNSIQDRVEAYNTKINSLKDESDAKFETVGDVAVISENQKK 93 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + ++ A + + + D + + T ++IS+ Sbjct: 94 QMRKTLQNVDPQKLANAKTLQDSINLAVGYSLTKSMRENFDGNDEDIDVNIDETVVMISV 153 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR--DNW 285 D+ +F+ S + +L+++ V+ + I GHTD + + DNW Sbjct: 154 SDKL---LFNSGSYRVSNKANSLLERLAAVINSEPAIEVMIEGHTDDRTVKQGSYIKDNW 210 Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 LS +RA + + L V+ +++ G + ++ +A+D +ANRR IL+ Sbjct: 211 DLSTERATAIIRKLADDYNVAPEKMIAA-GRSSYKPLVANDSNENRAANRRTRILIL 266 >gi|37527138|ref|NP_930482.1| hypothetical protein plu3255 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786572|emb|CAE15629.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 575 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 8/108 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAY 293 +FD + + VL + + I GHTD++ A N LSL RA Sbjct: 443 ALFDVGQAKLKAGSTKVLVNALINIRAKPGWMILIAGHTDST---GDATKNQVLSLARAE 499 Query: 294 SAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + L S +S + G + +ANRR++I + Sbjct: 500 AVRDWMLQTSDISPA-CFTVQGKGATSPIATNTTAAGRAANRRVEIRL 546 >gi|308376544|ref|ZP_07439229.2| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu008] gi|308350673|gb|EFP39524.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu008] Length = 320 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F + +P +L ++ + L + ++I G+TD + N LS R Sbjct: 215 GPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNT---GSEGINIPLSAQR 271 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A L+ GV+ D I+ + G ++ + NRR++I+V Sbjct: 272 AKIVADYLVARGVAGDHIATV-GLGSVNPIASNATPEGRAKNRRVEIVV 319 >gi|149277383|ref|ZP_01883524.1| outer membrane protein 3a [Pedobacter sp. BAL39] gi|149231616|gb|EDM36994.1| outer membrane protein 3a [Pedobacter sp. BAL39] Length = 657 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 43/118 (36%), Gaps = 13/118 (11%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +++ + + L + +L + + I + HTD + A N LS R Sbjct: 544 KDVLYEFDKADLTELSKGKLDYLYTILIDNPDIDIELSAHTDN---KGTAEYNMDLSNRR 600 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVEDR 341 A S L+ G+ +R++ G+ + + + NRR + V + Sbjct: 601 AQSCLDYLVTKGIPAERMTS-KGYGLTKPVAPNQFSDGKDNPEGRAMNRRTEFKVLKK 657 >gi|46203195|ref|ZP_00208848.1| COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Magnetospirillum magnetotacticum MS-1] Length = 170 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 + F+ SS P L K L + I GH D N+ L R Sbjct: 60 DRVFFESDSSDLTPTATATLDKQASWLQRYSRYSFLIEGHADER---GTREYNYSLGARR 116 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A + L G++ R+ +S + R +D S NRR Sbjct: 117 AQAVLDYLTSRGIAPSRMRTVS-YGKERPVAVCNDISCWSQNRR 159 >gi|312198597|ref|YP_004018658.1| OmpA/MotB domain protein [Frankia sp. EuI1c] gi|311229933|gb|ADP82788.1| OmpA/MotB domain protein [Frankia sp. EuI1c] Length = 371 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 6/107 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + F S++ L + L T + GHTD++ A N LSL RA Sbjct: 265 HPVTFASDSAVLSDRDRAALDLVAAALRAGTAPALVAGHTDST---GPASLNEALSLGRA 321 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 +A L+ GV R+ + G+ R + +ANRR++I+ Sbjct: 322 QAAVGYLVSQGVPAGRLRAV-GYGASRPAADNATPAGRAANRRVEIV 367 >gi|229592294|ref|YP_002874413.1| putative OmpA family lipoprotein [Pseudomonas fluorescens SBW25] gi|126214996|emb|CAM35533.1| OprL protein [Pseudomonas fluorescens] gi|229364160|emb|CAY51808.1| putative OmpA family lipoprotein [Pseudomonas fluorescens SBW25] Length = 166 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TDA N L RA + Sbjct: 67 FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDAR---GTREYNMALGERRAKAVQ 123 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GV+ ++ +S + R + + NRR+++ Sbjct: 124 RYLVLQGVAPGQLELVS-YGKERPVATGNDEQSWAQNRRVEL 164 >gi|85709715|ref|ZP_01040780.1| outer membrane protein [Erythrobacter sp. NAP1] gi|85688425|gb|EAQ28429.1| outer membrane protein [Erythrobacter sp. NAP1] Length = 231 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 63/205 (30%), Gaps = 17/205 (8%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + ++R + L + + K+ D ++ Sbjct: 25 DPNTGERKVSRTAIGAGVGGTLGYLLGGVIGGNTARIIGAGIGGSAGAVVGKQFDDQIRE 84 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + L G D V + IL+ + D F S+ P L + Sbjct: 85 LDEELEGTGVD-----VEEIGDQDAILVRLPDGVT---FASGSATINPGFYDSLNSVANS 136 Query: 259 LAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + G TD + N RLS RA + L GV+ R+ G+ Sbjct: 137 LIQYPNSLVDVYGFTDTT---GSDSLNQRLSEQRAQAVADYLASRGVARSRL-ATRGYGE 192 Query: 318 H----RLKIASDPMNSANRRIDILV 338 R+K A NRR++I + Sbjct: 193 SYDYLRIKTADGVAEPLNRRVEIKI 217 >gi|126733592|ref|ZP_01749339.1| peptidoglycan-associated lipoprotein, putative [Roseobacter sp. CCS2] gi|126716458|gb|EBA13322.1| peptidoglycan-associated lipoprotein, putative [Roseobacter sp. CCS2] Length = 173 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F +S PE +L + L + + ++ GH D N L R Sbjct: 62 DRVLFAVDTSTITPEGQTILDGQAQWLLTNADYRAVIEGHADEQ---GTREYNLALGQRR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + + L+ GV R+ +++ F R + + + NRR Sbjct: 119 ANAVREYLVSRGVPSTRL-QVTSFGKERPIAICSEESCYAQNRR 161 >gi|15608039|ref|NP_215414.1| outer membrane protein A OMPA [Mycobacterium tuberculosis H37Rv] gi|15840318|ref|NP_335355.1| OmpA family protein [Mycobacterium tuberculosis CDC1551] gi|31792087|ref|NP_854580.1| outer membrane protein A OMPA [Mycobacterium bovis AF2122/97] gi|121636822|ref|YP_977045.1| putative outer membrane protein A ompA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660677|ref|YP_001282200.1| outer membrane protein A [Mycobacterium tuberculosis H37Ra] gi|148822109|ref|YP_001286863.1| outer membrane protein A ompA [Mycobacterium tuberculosis F11] gi|167967701|ref|ZP_02549978.1| outer membrane protein A ompA [Mycobacterium tuberculosis H37Ra] gi|215402698|ref|ZP_03414879.1| outer membrane protein A ompA [Mycobacterium tuberculosis 02_1987] gi|215426166|ref|ZP_03424085.1| outer membrane protein A ompA [Mycobacterium tuberculosis T92] gi|215429757|ref|ZP_03427676.1| outer membrane protein A ompA [Mycobacterium tuberculosis EAS054] gi|215445042|ref|ZP_03431794.1| outer membrane protein A ompA [Mycobacterium tuberculosis T85] gi|219556764|ref|ZP_03535840.1| outer membrane protein A ompA [Mycobacterium tuberculosis T17] gi|224989293|ref|YP_002643980.1| putative outer membrane protein A [Mycobacterium bovis BCG str. Tokyo 172] gi|253800076|ref|YP_003033077.1| hypothetical protein TBMG_03089 [Mycobacterium tuberculosis KZN 1435] gi|254231205|ref|ZP_04924532.1| outer membrane protein A ompA [Mycobacterium tuberculosis C] gi|254363830|ref|ZP_04979876.1| outer membrane protein A ompA [Mycobacterium tuberculosis str. Haarlem] gi|254549877|ref|ZP_05140324.1| hypothetical protein Mtube_05346 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185796|ref|ZP_05763270.1| hypothetical protein MtubCP_07170 [Mycobacterium tuberculosis CPHL_A] gi|260199919|ref|ZP_05767410.1| hypothetical protein MtubT4_07255 [Mycobacterium tuberculosis T46] gi|260204103|ref|ZP_05771594.1| hypothetical protein MtubK8_07315 [Mycobacterium tuberculosis K85] gi|289442311|ref|ZP_06432055.1| outer membrane protein A ompA [Mycobacterium tuberculosis T46] gi|289446466|ref|ZP_06436210.1| outer membrane protein A ompA [Mycobacterium tuberculosis CPHL_A] gi|289555318|ref|ZP_06444528.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 605] gi|289568867|ref|ZP_06449094.1| outer membrane protein A ompA [Mycobacterium tuberculosis T17] gi|289573527|ref|ZP_06453754.1| outer membrane protein A ompA [Mycobacterium tuberculosis K85] gi|289744630|ref|ZP_06504008.1| outer membrane protein A ompA [Mycobacterium tuberculosis 02_1987] gi|289749421|ref|ZP_06508799.1| outer membrane protein A ompA [Mycobacterium tuberculosis T92] gi|289752954|ref|ZP_06512332.1| outer membrane protein A ompA [Mycobacterium tuberculosis EAS054] gi|289756985|ref|ZP_06516363.1| outer membrane protein A ompA [Mycobacterium tuberculosis T85] gi|294996380|ref|ZP_06802071.1| hypothetical protein Mtub2_18234 [Mycobacterium tuberculosis 210] gi|297633418|ref|ZP_06951198.1| hypothetical protein MtubK4_04816 [Mycobacterium tuberculosis KZN 4207] gi|297730403|ref|ZP_06959521.1| hypothetical protein MtubKR_04896 [Mycobacterium tuberculosis KZN R506] gi|306775025|ref|ZP_07413362.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu001] gi|306782060|ref|ZP_07420397.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu002] gi|306783573|ref|ZP_07421895.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu003] gi|306787937|ref|ZP_07426259.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu004] gi|306792274|ref|ZP_07430576.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu005] gi|306796673|ref|ZP_07434975.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu006] gi|306806741|ref|ZP_07443409.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu007] gi|306966938|ref|ZP_07479599.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu009] gi|306971133|ref|ZP_07483794.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu010] gi|307078861|ref|ZP_07488031.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu011] gi|307083420|ref|ZP_07492533.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu012] gi|313657730|ref|ZP_07814610.1| hypothetical protein MtubKV_04886 [Mycobacterium tuberculosis KZN V2475] gi|54040011|sp|P65594|Y923_MYCBO RecName: Full=Uncharacterized protein Mb0923 gi|54042590|sp|P65593|Y899_MYCTU RecName: Full=Uncharacterized protein Rv0899/MT0922 gi|1314039|emb|CAA97374.1| OUTER MEMBRANE PROTEIN A OMPA [Mycobacterium tuberculosis H37Rv] gi|13880481|gb|AAK45169.1| OmpA family protein [Mycobacterium tuberculosis CDC1551] gi|31617675|emb|CAD93784.1| PROBABLE OUTER MEMBRANE PROTEIN A OMPA [Mycobacterium bovis AF2122/97] gi|114199356|gb|ABI54278.1| outer membrane protein A [Mycobacterium bovis] gi|121492469|emb|CAL70937.1| probable outer membrane protein A ompA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600264|gb|EAY59274.1| outer membrane protein A ompA [Mycobacterium tuberculosis C] gi|134149344|gb|EBA41389.1| outer membrane protein A ompA [Mycobacterium tuberculosis str. Haarlem] gi|148504829|gb|ABQ72638.1| outer membrane protein A [Mycobacterium tuberculosis H37Ra] gi|148720636|gb|ABR05261.1| outer membrane protein A ompA [Mycobacterium tuberculosis F11] gi|224772406|dbj|BAH25212.1| putative outer membrane protein A [Mycobacterium bovis BCG str. Tokyo 172] gi|253321579|gb|ACT26182.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 1435] gi|289415230|gb|EFD12470.1| outer membrane protein A ompA [Mycobacterium tuberculosis T46] gi|289419424|gb|EFD16625.1| outer membrane protein A ompA [Mycobacterium tuberculosis CPHL_A] gi|289439950|gb|EFD22443.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 605] gi|289537958|gb|EFD42536.1| outer membrane protein A ompA [Mycobacterium tuberculosis K85] gi|289542621|gb|EFD46269.1| outer membrane protein A ompA [Mycobacterium tuberculosis T17] gi|289685158|gb|EFD52646.1| outer membrane protein A ompA [Mycobacterium tuberculosis 02_1987] gi|289690008|gb|EFD57437.1| outer membrane protein A ompA [Mycobacterium tuberculosis T92] gi|289693541|gb|EFD60970.1| outer membrane protein A ompA [Mycobacterium tuberculosis EAS054] gi|289712549|gb|EFD76561.1| outer membrane protein A ompA [Mycobacterium tuberculosis T85] gi|308216378|gb|EFO75777.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu001] gi|308325291|gb|EFP14142.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu002] gi|308331576|gb|EFP20427.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu003] gi|308335389|gb|EFP24240.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu004] gi|308339194|gb|EFP28045.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu005] gi|308342931|gb|EFP31782.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu006] gi|308346757|gb|EFP35608.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu007] gi|308355333|gb|EFP44184.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu009] gi|308359272|gb|EFP48123.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu010] gi|308363182|gb|EFP52033.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu011] gi|308366838|gb|EFP55689.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu012] gi|326904881|gb|EGE51814.1| outer membrane protein A ompA [Mycobacterium tuberculosis W-148] gi|328459815|gb|AEB05238.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 4207] Length = 326 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F + +P +L ++ + L + ++I G+TD + N LS R Sbjct: 221 GPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNT---GSEGINIPLSAQR 277 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A L+ GV+ D I+ + G ++ + NRR++I+V Sbjct: 278 AKIVADYLVARGVAGDHIATV-GLGSVNPIASNATPEGRAKNRRVEIVV 325 >gi|94495568|ref|ZP_01302148.1| hypothetical protein SKA58_05950 [Sphingomonas sp. SKA58] gi|94424956|gb|EAT09977.1| hypothetical protein SKA58_05950 [Sphingomonas sp. SKA58] Length = 290 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 30/272 (11%), Positives = 75/272 (27%), Gaps = 9/272 (3%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 T + + + + I + +++ +N+ Sbjct: 18 TGPMASPLAAQDAPPADLSATITEPEPAPAEAVKGPTIEGFISARSGDQMQVTGEDGANN 77 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA- 196 + + ++ + +N + ++A + + +DL Sbjct: 78 VVAIGEATVVRASGGFLGLGRETLGPDALLNGLPVSVETVQGAQGLVATRIALKNKDLKT 137 Query: 197 -KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I + + A+ I + FD + P+ L Sbjct: 138 ASMIRNGTAQGFAEQSAATEALRGRVADIDQYNVKATTNVNFDTGKTALSPQAKSDLCAT 197 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKIS 313 + + G+TD++ N LS RA L + R+ + Sbjct: 198 AASAEQMDNALLLVVGYTDST---GPEEYNQMLSEKRAGRVVNYLQQHCNWKPYRMLTPT 254 Query: 314 GFAHHRLKIASDPMN--SANRRIDILVEDRQG 343 G + + ++D + NRR+ + + +G Sbjct: 255 GMSEAQPIASNDTEQGKAENRRVSVNILVSKG 286 >gi|163745646|ref|ZP_02153006.1| OmpA domain protein [Oceanibulbus indolifex HEL-45] gi|161382464|gb|EDQ06873.1| OmpA domain protein [Oceanibulbus indolifex HEL-45] Length = 641 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 90/315 (28%), Gaps = 19/315 (6%) Query: 35 IVYADF-MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 I +AD +T+L A TD D+ + ++ + + ++P Sbjct: 300 ISFADADITLLAA--------PGTDSDSFDRVVGELENALPDVFALTAKLPKVEDPNAGP 351 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 + LS + + G + Y + + + + + + Sbjct: 352 PEFTATLSPEGQVQLRGRLTTEGLRDLADSYAKSHFGSSNVYTAARLDETLPADWATRVL 411 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL--QDLAKKISSTLSGLVADNI 211 ++ S+ + + K A L L + ++ + + Sbjct: 412 TGLEAMASLANGSVTVTPDRLEVTGNTGKKEANTTVASLLADKLGESADYSIDITYQEKL 471 Query: 212 VKGVLFETTRTGIL-ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269 T I I F+ ++ + + I EVL + + I+ Sbjct: 472 DPIAGLPTPEECEAEIGEILTIGKITFEPGNATIDASALGTMDDIAEVLKRCGDIPLEIQ 531 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 G+TD+ N LS RA S L V G+ + Sbjct: 532 GYTDSQ---GRETMNLSLSQSRAESVLNELRARRVLTSSFLA-KGYGEENPIADNQTEEG 587 Query: 330 A--NRRIDILVEDRQ 342 NRRI+ + Q Sbjct: 588 REANRRIEFRLIQAQ 602 >gi|90023231|ref|YP_529058.1| HAD family hydrolase [Saccharophagus degradans 2-40] gi|89952831|gb|ABD82846.1| OmpA/MotB [Saccharophagus degradans 2-40] Length = 380 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 6/101 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +SS+ PE ++K+ + +A + + GHTD A N LS RA + Sbjct: 269 FDSNSSVVKPEYFAEIRKVADFMAQYENSVVVIEGHTDTR---GAAAYNKSLSQKRADAV 325 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 VL+ R G+ + ANRR+ Sbjct: 326 AAVLVSEMNVAKRRVTSVGYGEEQPIADESTREGLVANRRV 366 >gi|163755848|ref|ZP_02162966.1| outer membrane protein, peptidoglycan-associated lipoprotein [Kordia algicida OT-1] gi|161324369|gb|EDP95700.1| outer membrane protein, peptidoglycan-associated lipoprotein [Kordia algicida OT-1] Length = 648 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 18/165 (10%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSSIP 244 R + L D ++ V + + I D + FD S Sbjct: 488 RASKKDYNSAEALLPKQEDPGLREVTLLLEKEEVPFEIGDDLAVTLNIPIIYFDFDKSNI 547 Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 P+ L K+ V+ I +R HTD+ N LS R S ++ G Sbjct: 548 RPDAAAELAKVIAVMKKYPTLKIDVRSHTDSR---GSDSYNMALSQRRNQSTRDYIISKG 604 Query: 304 VSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341 + R+ G+ R S+ + NRR + +V ++ Sbjct: 605 IDASRL-TGRGYGETRHVNKCSNGVKCSEEEHQLNRRSEFIVVEK 648 >gi|114797292|ref|YP_760148.1| OmpA family membrane protein [Hyphomonas neptunium ATCC 15444] gi|114737466|gb|ABI75591.1| membrane protein, OmpA family [Hyphomonas neptunium ATCC 15444] Length = 544 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 12/115 (10%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAY 293 +FD PE L ++ L I + GHTD++ A N LS +RA Sbjct: 431 LFDVGKYEIKPEAESALAELAAQLQTYGADIRVTVEGHTDST---GSAASNQTLSENRAR 487 Query: 294 SAYQVLMKSG--VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE-DRQG 343 S + L V ED I G+ R + + NRR+DIL+ ++G Sbjct: 488 SVWDNLSGKISPVPED--VTIRGYGASRPVADNATEEGRAENRRVDILILPGKKG 540 >gi|213964216|ref|ZP_03392450.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sputigena Capno] gi|213953135|gb|EEB64483.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sputigena Capno] Length = 919 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F S + L+ I +L + I + G+TD + A N +LS R Sbjct: 811 DRTYFKTGSDELTEGSEQQLKNIVAILKAYPKAAIRLGGYTDNT---GSAEGNLKLSERR 867 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMN--SANRRIDILVEDR 341 A S L+ G ++ ++S G+ +D + NRRIDI + + Sbjct: 868 ANSVLNKLVALGANKAQLSA-QGYGQEHPVCPANDTDECKAKNRRIDIRLTAK 919 >gi|149773177|dbj|BAF64763.1| outer membrane protein A [Shewanella livingstonensis] Length = 385 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 8/154 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D +++ + V ++ +F S+ + L Sbjct: 230 DDDKDGVTNNIDKCPDTPSTHKVDATGCSVYENVTTKYDLGGILFANDSAEIRAGSFADL 289 Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 +K+ + L + S++GH A N +LS RA + L K G+S RIS Sbjct: 290 EKLADHLTKYPQHTVSVQGHASNV---GKAEYNMKLSERRAVAVASALNKKYGISISRIS 346 Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 + G+ + + + NRRI+ +V + Sbjct: 347 SV-GYGVTKPVMQGSSAEANRVNRRIEAIVTGTE 379 >gi|114564063|ref|YP_751577.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114335356|gb|ABI72738.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400] Length = 376 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 8/154 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D +++ + V ++ +F S+ + L Sbjct: 221 DDDKDGVTNNIDKCPDTPSTHKVDATGCSVYENVTTKYDLGGILFANDSAEIRAGSFADL 280 Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 +K+ + L + S++GH A N +LS RA + L K G+S RIS Sbjct: 281 EKLADHLTKYPQHTVSVQGHASNV---GKAEYNMKLSERRAVAVASALNKKYGISISRIS 337 Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 + G+ + + + NRRI+ +V + Sbjct: 338 SV-GYGVTKPVMQGSSAEANRVNRRIEAIVTGTE 370 >gi|134292850|ref|YP_001116586.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4] gi|134136007|gb|ABO57121.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4] Length = 226 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 6/162 (3%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + K + + A R L +++ + L+ L A + GI Sbjct: 52 QLAKYNALDARYQTLARHDAAARGTAAVTLPERVPAWLASLDALKTAGRIALVRAPHGIE 111 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARD 283 I I + +F+ + LP+ VL +I L+ + I + GHTD P N Sbjct: 112 IGIDAK---VLFNVGDARLLPDAAPVLTQIARALSEHASGDILVEGHTDNVPIANAKYES 168 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 NW LS RA S + L + GV+ R++ I G A + + D Sbjct: 169 NWELSSARAGSVVRYLAERGVAPHRLAAI-GRADTQPLVTGD 209 Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 17/34 (50%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIIN 55 + G W I YAD +T LM FL ++++ Sbjct: 19 DDEGDDAQTGRWLISYADLITTLMVLFLALYVLQ 52 >gi|170695384|ref|ZP_02886530.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] gi|170139784|gb|EDT07966.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] Length = 248 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + F S+ P L + +++ G+TD + N LS Sbjct: 140 QGNANFATDSATLSPIAKENLDHFMAANKGANLRRVTVTGYTDKT---GSEAHNLALSKA 196 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + Q L G+ ++ G ++ NRR+D+ V Sbjct: 197 RAEAVVQYLRDGGLEGEQFVA-QGLGSADPVASNATAEGRSQNRRVDVRV 245 >gi|260777706|ref|ZP_05886599.1| protein F-related protein [Vibrio coralliilyticus ATCC BAA-450] gi|260605719|gb|EEX32004.1| protein F-related protein [Vibrio coralliilyticus ATCC BAA-450] Length = 205 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 10/119 (8%) Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNI 280 I++ + D F+ SS+ P+++ L +G LA + + GH D++ Sbjct: 88 NHIMVKLTDTIK---FNTGSSMVKPDSMYWLDMMGRYLATQPGIDIVIDGHADST---GA 141 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 N LS+ RA + + L+ + V+ + I G+ + ++ NRR+++L Sbjct: 142 PTFNDSLSMKRAKAVKKQLVSNNVAMNSIYT-RGYGEYVPACSNTTSAGKACNRRVEVL 199 >gi|162456085|ref|YP_001618452.1| OmpA domain-containing protein [Sorangium cellulosum 'So ce 56'] gi|161166667|emb|CAN97972.1| OmpA domain protein [Sorangium cellulosum 'So ce 56'] Length = 210 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294 F+ + E+ +L ++ + T + I GH A N +LS RA + Sbjct: 95 FEYDQATIRTESHSLLDEVVGTIKKHTHIKKIAIEGHASAE---GSEDHNLKLSDRRAKA 151 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 + L+ G++ + GF + +D NRR++ + + Sbjct: 152 VMKYLVDHGIAAG-MLTAKGFGKSKPIADNDTPEGREKNRRVEFNIVE 198 >gi|332528553|ref|ZP_08404541.1| peptidoglycaN-associated lipoprotein [Hylemonella gracilis ATCC 19624] gi|332042064|gb|EGI78402.1| peptidoglycaN-associated lipoprotein [Hylemonella gracilis ATCC 19624] Length = 189 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 49/140 (35%), Gaps = 7/140 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + A SI D FD SS PE V++ + Sbjct: 52 AAPEAKPAQASAPTPAAAVPVAKPADSIADVAKLVYFDYDSSAIKPEFRAVIEAHARFMQ 111 Query: 261 HSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + +I GH D N L RA + Q+L+ GV+ +I IS F + Sbjct: 112 SNPARSVTIAGHADER---GGTEYNLALGQRRADAVRQMLVLLGVNSSQIETIS-FGKEK 167 Query: 320 LKI--ASDPMNSANRRIDIL 337 + +++ + NRR +I Sbjct: 168 PAVRGSNEAAWAKNRRAEIT 187 >gi|296536326|ref|ZP_06898436.1| outer membrane protein [Roseomonas cervicalis ATCC 49957] gi|296263348|gb|EFH09863.1| outer membrane protein [Roseomonas cervicalis ATCC 49957] Length = 368 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 7/108 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD + ++ + + + I + GH D + N RLS RA Sbjct: 265 VFFDFDRADLTDRARQIIAEAAQNSSRVQATRIEVAGHADR---AGSPQYNQRLSQRRAD 321 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 + L++ GV+ I + F R + + NRR++I++ Sbjct: 322 AVAAELVRLGVARSAI-TVQAFGESRPLVPTADGVREPQNRRVEIVLR 368 >gi|261251125|ref|ZP_05943699.1| protein F-related protein [Vibrio orientalis CIP 102891] gi|260937998|gb|EEX93986.1| protein F-related protein [Vibrio orientalis CIP 102891] Length = 205 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 10/119 (8%) Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNI 280 +++ + D F+ SS P++ L +G LA + + GH D++ Sbjct: 88 NHVMVKLKDTIK---FNTGSSNVSPDSQYWLDMMGSYLATQPGIDIVIDGHADST---GA 141 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 N LS+ RA + + L+++ V+ D I G+ + ++ NRR+++L Sbjct: 142 PTFNDGLSMKRASAVKRQLVRNNVAMDSIFT-RGYGEYVPACSNKTKAGKACNRRVEVL 199 >gi|172064633|ref|YP_001812283.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6] gi|171998118|gb|ACB69034.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 248 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F + PE L + E + ++I G+TDA+ A N LS R Sbjct: 141 GDALFAPGQATLTPEARKSLNALMEQQQGTFFSRVTIIGYTDAT---GSAALNDVLSQRR 197 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A + L G+ D + ++ G + +++ + NRR++I + + Sbjct: 198 AQAVASYLRTRGLKYD-VIEVEGRGSAQSVASNETAQGRAKNRRVEIQLVAK 248 >gi|284037429|ref|YP_003387359.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283816722|gb|ADB38560.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 704 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 +F +S LP L K+ +++ + + I GHTD N +L+ D Sbjct: 596 MREVLFQQSQFTLLPGADTELDKMADMMETHPTMELLIEGHTDNQ---GDWEPNMKLAED 652 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 R + L+K G+ +RI + + +++ NRR++ + Sbjct: 653 RVRVVKEYLLKKGIKPERIQT-KAWGPSKPIASNETEEKRKLNRRVEFTILK 703 >gi|330903399|gb|EGH33971.1| flagellar motor protein MotB [Pseudomonas syringae pv. japonica str. M301072PT] Length = 50 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 1/50 (2%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDD 59 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W++++ Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLMSSATP 50 >gi|119385422|ref|YP_916478.1| putative chemotaxis MotB protein [Paracoccus denitrificans PD1222] gi|119375189|gb|ABL70782.1| putative chemotaxis MotB protein [Paracoccus denitrificans PD1222] Length = 266 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 8/200 (4%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 TR G + D E + K L+ +D+A+ I L+G Sbjct: 70 QSTRSGHDGPFGGEVQDAETNSGKGAGASRDSLAARTQDGRDTG--FEDMARHIQDQLTG 127 Query: 206 LVAD-----NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 A+ N+++ V+ T G++I + D + P+F S+ P P + + VL Sbjct: 128 SGAESLQKVNLLRHVVTRMTDEGLVIELTDLMDEPLFVGDSAQPTPAMKELAGILSGVLG 187 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 I++ GH A P I W LS RA++ +L +G RI +++ FA R Sbjct: 188 RVRNEIALTGHVRAYPEMLIQSPVWALSDARAHALRNLLEGAGFDTTRIQRVTAFADRRN 247 Query: 321 KIASDPMNSANRRIDILVED 340 + + PM+ N RI++++ Sbjct: 248 RSVN-PMDPDNNRIEVILLR 266 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 6/184 (3%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 IIIKK D ++ G+WK+ YADF+T +MAFFL+MW++NAT + ++ + Sbjct: 2 AGNGGSAPIIIKKVQGGGDAGHHGGAWKVAYADFVTAMMAFFLLMWLLNATTEKQRQGLA 61 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 YFNP + + P + + + + L + + + Sbjct: 62 DYFNPTLIQSTRSGH------DGPFGGEVQDAETNSGKGAGASRDSLAARTQDGRDTGFE 115 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + + + + + + S + AM Sbjct: 116 DMARHIQDQLTGSGAESLQKVNLLRHVVTRMTDEGLVIELTDLMDEPLFVGDSAQPTPAM 175 Query: 187 KRKK 190 K Sbjct: 176 KELA 179 >gi|325279770|ref|YP_004252312.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324311579|gb|ADY32132.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712] Length = 625 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD PE+ L+++ L + E I I GHTD + + N+RLS +RA+ Sbjct: 523 FFDVDDYRLRPESYPELRQLVVFLKQNPEVKIEISGHTDNT---GSDQHNYRLSENRAFE 579 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 Y+ L + + ++R+ + G+ R +D NRR +I V Sbjct: 580 VYKYLFLNHIQKERM-EYKGYGKDRPLRTNDTEEGRKENRRTEIRVR 625 >gi|313681736|ref|YP_004059474.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994] gi|313154596|gb|ADR33274.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994] Length = 282 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 81/254 (31%), Gaps = 13/254 (5%) Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 PE + K + + + ++++ +T Sbjct: 10 PECPAGEKWAVPTADFFSLLLALFIALFAIASVNKEKIKAVKEEFVKIYDYAPAPQEITP 69 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + + D + K + + +KI L Sbjct: 70 VVDMVSENNPTPDATANAAGSAPVTDGGSLLVGAPPTKSTEAASEAIQKIQQDLKNASMG 129 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VIS 267 + + + SI + +I E + L+++ +++ IS Sbjct: 130 SGPLDQSMDGVLLKLPTSIPFKGANA------TIDNEELHLFLRRVTDIINTLPPTVDIS 183 Query: 268 IRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 IRG+TD P +DN LS RA + + L+++GV+ +R+S GF + + Sbjct: 184 IRGYTDNQPLPPGAGYKDNIELSSRRAETVMRELIRNGVAPERLSTA-GFGAAKPVAENT 242 Query: 326 PM--NSANRRIDIL 337 + NRR++ Sbjct: 243 TEENRAKNRRVEFY 256 >gi|290559940|pdb|2KGW|A Chain A, Solution Structure Of The Carboxy-Terminal Domain Of Ompatb, A Pore Forming Protein From Mycobacterium Tuberculosis Length = 129 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F + +P +L ++ + L + ++I G+TD + N LS R Sbjct: 24 GPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNT---GSEGINIPLSAQR 80 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A L+ GV+ D I+ + G ++ + NRR++I+V Sbjct: 81 AKIVADYLVARGVAGDHIATV-GLGSVNPIASNATPEGRAKNRRVEIVV 128 >gi|83312309|ref|YP_422573.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Magnetospirillum magneticum AMB-1] gi|82947150|dbj|BAE52014.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Magnetospirillum magneticum AMB-1] Length = 161 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + FD S + L K L ++ GH D N L R Sbjct: 56 DRVFFDFDKSSLRADAKATLDKQAAWLKAYPNYSLTVEGHADER---GTREYNLALGEKR 112 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + L +G++ R+ +S + R +++ S NRR Sbjct: 113 ANAVASYLKSAGIAAARVKTVS-YGKERPVALGSNEAAWSQNRR 155 >gi|146301711|ref|YP_001196302.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146156129|gb|ABQ06983.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 642 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 57/162 (35%), Gaps = 16/162 (9%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-----QRNTPMFDKSSSIPLP 246 ++ ++T +V LI D + FD S Sbjct: 483 IEASKDNFTTTTKAIVTPENSGITQVPIGLDPSLIERKDGLLKIKIGIIFFDLDKSDVRY 542 Query: 247 ETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + + L K+ +++ V I I HTD+ + N LS RA + ++ G++ Sbjct: 543 DAAIELNKVVLLMSQYPSVVIKIESHTDSR---ANDQYNLELSDRRAKATRDYIISQGIA 599 Query: 306 EDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 +RI G+ +L ++ + NRR + ++ Sbjct: 600 PERIESAIGYGETQLINNCSNGVPCTEAQHQMNRRSEFIITK 641 >gi|326572627|gb|EGE22616.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis CO72] Length = 186 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD S P+ +L + + L + + + GHTD N L Sbjct: 81 PSLVYFDFDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDER---GSREYNMSLGER 137 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 RA + L+ G+++ + IS F R ++ S NRR ++ Sbjct: 138 RAVAVRNYLLGKGINQASVEIIS-FGEERPIAFGTNEEAWSQNRRAEL 184 >gi|296115020|ref|ZP_06833663.1| outer membrane protein OmpA [Gluconacetobacter hansenii ATCC 23769] gi|295978438|gb|EFG85173.1| outer membrane protein OmpA [Gluconacetobacter hansenii ATCC 23769] Length = 392 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD---ASPFRNIARDNWRLSLD 290 FD + ++ + + H I + G+TD A P + N LSL Sbjct: 283 VFFDWDGAALTGRAREIVAEAAQASTHVQTTRIEVNGYTDNSAAQPGPRGQQYNMGLSLR 342 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA S L++ GV + I I G+ + + D NRR++I++ Sbjct: 343 RANSVKAELIRDGVPANAID-IQGYGEAHPLVPTGPDTREPQNRRVEIIL 391 >gi|297183087|gb|ADI19231.1| flagellar motor protein [uncultured delta proteobacterium HF0200_14D13] Length = 211 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 18/133 (13%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPFRNIAR- 282 I+ +F + I VL + + E ++ GH D P Sbjct: 65 IVSLPQDFLFRSGDAELKAGAIRVLTPFFQKIRDLPEHQGDLVTVEGHADNLPIHTDKYP 124 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------S-------DPMNS 329 NW LS RA + +L+ ++G++ R K++ + + Sbjct: 125 SNWELSTARATNVATMLINRMGYASDTLSVNGYSDTRPKVSYKDARGNALRGTALEVARR 184 Query: 330 ANRRIDILVEDRQ 342 NRR++I++ Sbjct: 185 TNRRVEIVITTPP 197 Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 23/40 (57%), Gaps = 7/40 (17%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINA 56 ++++ G+W I +AD MT++ FF+++ +++ Sbjct: 1 MRRR-------EGGGAWVITFADLMTLMFCFFVLLTVLST 33 >gi|300310091|ref|YP_003774183.1| outer membrane protein and related peptidoglycan-associated (lipo)proteins [Herbaspirillum seropedicae SmR1] gi|300072876|gb|ADJ62275.1| outer membrane protein and related peptidoglycan-associated (lipo)proteins [Herbaspirillum seropedicae SmR1] Length = 271 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 67/188 (35%), Gaps = 10/188 (5%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 + + + + + + Q +A ++S+L+ N Sbjct: 89 NNHVQSLISPNLKAVSRGQLKIDGTTVSITGEVANEAQRQQIASDMASSLNSSYTVNNG- 147 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHT 272 + T+ G+L + + R F+ + PE +L +I +L + I G+T Sbjct: 148 -LRVSTSEQGLLDNALANR-VVSFESGQATLTPEGKRILDEIAATMLKLKGRHVEIIGNT 205 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330 D + N LSL RA + L GV E + SG R ++ + Sbjct: 206 DNE---GLRASNISLSLARADAVKAYLGAKGVDES-LLSTSGQGPDRPVASNATAEGRAK 261 Query: 331 NRRIDILV 338 NRRI+ + Sbjct: 262 NRRIEFRI 269 >gi|300727039|ref|ZP_07060458.1| immunogenic 23 kDa lipoprotein PG3 [Prevotella bryantii B14] gi|299775583|gb|EFI72174.1| immunogenic 23 kDa lipoprotein PG3 [Prevotella bryantii B14] Length = 229 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 8/140 (5%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + ++ V++ V+ V I ++ FD S L K L Sbjct: 81 KAEIAQQVSNAKVEEVTDANGLKAIKVTFDSGLQ---FDLGKSTLKSAAKNDLAKFASTL 137 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + I+G+TDA+ N LS RA + L+ GVS + ++G+A Sbjct: 138 KNDPMLAVDIQGYTDAT---GGDAINLPLSDKRAKAVSSYLVSQGVSSSQFKNVAGYASA 194 Query: 319 RLKIASDPMNSANRRIDILV 338 + + + NRR+++ + Sbjct: 195 NPIV-NATVAPENRRVEVYL 213 >gi|207724483|ref|YP_002254880.1| outer membrane protein [Ralstonia solanacearum MolK2] gi|206589704|emb|CAQ36665.1| outer membrane protein [Ralstonia solanacearum MolK2] Length = 277 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 73/246 (29%), Gaps = 12/246 (4%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 D + + G + + + + + Sbjct: 34 PGDPAPATAANPVPGQVVAGGMVPDEATKASVLARLRELYGSANVVDQIEVGNVVSPPNW 93 Query: 157 LC---KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 K + + ++ + + Q LA +++TL Sbjct: 94 TGNVQKILSPQIKQVNRGQLNIDGTQVAVHGDVQNEAQRQQLASDMATTLGASYTIKNGL 153 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272 V + ++ + ++ ++ F+ S+ P+ +L ++ VL I GHT Sbjct: 154 RVAAVSEQSLLDQTLANRIIE--FETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHT 211 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA 330 D N LS RA + L+ G ++ I G + A+ D S Sbjct: 212 DN---SGSRAMNLNLSQARAETVKSYLINKGAEPGTLTAI-GVGPDQPVAANTTDEGRSR 267 Query: 331 NRRIDI 336 NRRI+ Sbjct: 268 NRRIEF 273 >gi|259417968|ref|ZP_05741887.1| OmpA/MotB [Silicibacter sp. TrichCH4B] gi|259346874|gb|EEW58688.1| OmpA/MotB [Silicibacter sp. TrichCH4B] Length = 207 Score = 88.5 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ VL + + E + GHTDA N RL L RA +A Sbjct: 66 FDFDSARLDGNARQVLDAQADWIRQFPEVRFRVYGHTDAV---GSQSYNKRLGLRRARAA 122 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L+ G++ +R+ ++ F + + +D NRR Sbjct: 123 VNYLVARGIARNRLEAVASFGETQPLVLTDQRERRNRR 160 >gi|253701635|ref|YP_003022824.1| OmpA/MotB domain protein [Geobacter sp. M21] gi|251776485|gb|ACT19066.1| OmpA/MotB domain protein [Geobacter sp. M21] Length = 432 Score = 88.5 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + P+ L+ + + L + GHTD N +LS RA Sbjct: 326 FDTNKADLKPQYRAELKALADFLNEFPNATGVIEGHTDNV---GPKALNMKLSQLRADKI 382 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 L+K G++ +RI I G+ + ++ + NRRI+ Sbjct: 383 RNSLIKEFGIAPERIKAI-GYGPAKPVASNKDKAGKAKNRRIE 424 >gi|319763679|ref|YP_004127616.1| ompa/motb domain protein [Alicycliphilus denitrificans BC] gi|317118240|gb|ADV00729.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC] Length = 217 Score = 88.5 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 26/178 (14%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + L E+ ++ +RL L + ++ L+ + Sbjct: 43 GMQMELAERLKTEQRQRAEQARRLTTLEQALAGPLAAGRVTLQDGRIGI----------- 91 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN----- 279 + +F +S PE +L+ + L E++ + G TD P R Sbjct: 92 ---SGSVLFAFNSDELQPEGRQLLRSLSAPLAAYLRERGEILMVSGFTDDRPMRGGGGNA 148 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335 DNW LS RA + + L+ G+ ++ + F + ++ + NRR++ Sbjct: 149 RFADNWELSAQRALTVTRALIDEGIPSAQVFAAA-FGAEQAVASNADAEGRARNRRVE 205 >gi|289207478|ref|YP_003459544.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] gi|288943109|gb|ADC70808.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] Length = 213 Score = 88.5 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 9/114 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLD 290 +FD S+ PE L+++ L + + GHT A N LS Sbjct: 101 QALFDFDSADLRPEGRDALRELARSLTADDVEYSSVLVEGHTCTI---GPADYNQGLSER 157 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA S L GV ED I + G+ R + NRR+++ + RQ Sbjct: 158 RAQSVADFLASEGVREDDIRTV-GYGEDRPTADNSTREGREANRRVEVTSDVRQ 210 >gi|298293019|ref|YP_003694958.1| OmpA/MotB domain protein [Starkeya novella DSM 506] gi|296929530|gb|ADH90339.1| OmpA/MotB domain protein [Starkeya novella DSM 506] Length = 344 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 93/272 (34%), Gaps = 21/272 (7%) Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 S ++ + + + E ++ + Sbjct: 74 ANDSESESQMGALRASLLRLEQERDALQAAATAVASPEEIAAAQARSADLARELGQEKDA 133 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 ++ + ++ ++ L + + + RL DL ++++ L+ V + Sbjct: 134 AAQAAAQIAILNQQIAALRRQIAALEQALDISEQKDKESQSRLADLGRRLNVALAQRVQE 193 Query: 210 NIVKGVLFETTRTGILISIIDQR---------NTPMFDKSSSIPLPETIVVLQKIGEVL- 259 F IL D R + FD++S+ P+ + L K+ E L Sbjct: 194 LTRYRSEFFGRLRAILGDRPDVRIVGDRFVFQSEIFFDRASADLRPDAMPALDKLAEALV 253 Query: 260 -------AHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + V+ + GHTD P NW+LS R+ + Q L GVS + Sbjct: 254 ALEKEIPSDISWVLRVDGHTDNRPIATPLFPSNWQLSAARSIAVVQYLAGKGVSPQHLVA 313 Query: 312 ISGFAHHRLK--IASDPMNSANRRIDILVEDR 341 GF ++ SD + NRRI++ + +R Sbjct: 314 A-GFGEYQPIDDADSDDARARNRRIELKLTER 344 >gi|114046457|ref|YP_737007.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7] gi|113887899|gb|ABI41950.1| OmpA/MotB domain protein [Shewanella sp. MR-7] Length = 485 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 8/111 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S LPE+ VL+ + L + + GHTD + N LS RA + Sbjct: 378 LFDYDSERLLPESKPVLEVLASYLKQNPTLSFYVVGHTDD---KGERSYNQSLSERRAAT 434 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + L + +++ G + ++ NRR+++++ + Sbjct: 435 VIKQLSDGFKIPSAQLTA-HGNGEYSPVASNTNDAGQKLNRRVELVLRSDK 484 >gi|300313316|ref|YP_003777408.1| lipoprotein [Herbaspirillum seropedicae SmR1] gi|300076101|gb|ADJ65500.1| lipoprotein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 83/251 (33%), Gaps = 18/251 (7%) Query: 99 DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK----- 153 S +++ G + L+ ++ + + S Sbjct: 22 TTSDAQNLAPPVATPAPGQVLVTGTVPDEASKAAALTRLRELYGHDRVVDQISVGPVVLP 81 Query: 154 ---GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + K ++ + + + + + Q +A ++++L+ N Sbjct: 82 ANWNNHVQKLISPNLKAVRQGQLKIDGTNVSISGEVSHEAQRQQIASDMATSLNSSYIIN 141 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIR 269 + T+ G+L + + R F+ + PE +L +I +L + I Sbjct: 142 NG--LRVSTSEQGVLDNTLANR-VVSFESGRATLTPEGKRILDEIAATMLQLKGRRVEII 198 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--M 327 G+TD + N LSL RA + L GV + + SG R ++ Sbjct: 199 GNTDNE---GLRASNISLSLARADAVKAYLSTKGVDDS-LLTTSGQGPDRPVASNATSEG 254 Query: 328 NSANRRIDILV 338 + NRRI+ + Sbjct: 255 RARNRRIEFRI 265 >gi|330993347|ref|ZP_08317282.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1] gi|329759377|gb|EGG75886.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1] Length = 407 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD---ASPFRNIARDNWRLSLD 290 FD + ++ + + H I + G+TD A P + N LSL Sbjct: 298 VFFDWDGAALTGRAREIVAEAAQASTHVQTTRIEVNGYTDNSAAQPGPRGQQYNLGLSLR 357 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA S L++ GV I + G+ R + + D NRR++I++ Sbjct: 358 RADSVKAELIRDGVPASAIG-VQGYGEARPLVPTGPDTREPQNRRVEIIL 406 >gi|159045040|ref|YP_001533834.1| hypothetical protein Dshi_2499 [Dinoroseobacter shibae DFL 12] gi|157912800|gb|ABV94233.1| hypothetical protein Dshi_2499 [Dinoroseobacter shibae DFL 12] Length = 240 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 50/132 (37%), Gaps = 5/132 (3%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISI 268 +++ +L I+ T +FD S+ E ++ I E L + + Sbjct: 17 LIRLILAPAVLVWGAIAQAQDLGTVLFDFDSASLDAEAATQVRAIAEALEATPSYKPTIV 76 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 G+TDA N L RA + L GV RI I+ L +A Sbjct: 77 VGYTDAV---GSTGYNLALGQRRAQTVADALTAQGVPVSRIGSIASRGESDLVVAVATAE 133 Query: 329 SANRRIDILVED 340 NRR+++ ++D Sbjct: 134 RRNRRVNVALDD 145 >gi|237706550|ref|ZP_04537031.1| OmpA family membrane protein [Escherichia sp. 3_2_53FAA] gi|226899590|gb|EEH85849.1| OmpA family membrane protein [Escherichia sp. 3_2_53FAA] Length = 146 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 5/107 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + T V++ + + A +I + G+TDA+ + N +LSL RA + Sbjct: 35 FATGVRLKDGSTKVLVDALVNIRAKPGWLILVAGYTDAT---GDEKSNQQLSLRRAEAVR 91 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 ++++ + G + +D + NRR++I + R Sbjct: 92 NWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLVPR 138 >gi|146301218|ref|YP_001195809.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146155636|gb|ABQ06490.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 645 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 11/119 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 FD P+ I L K+ ++ + I HTD+ N +LS Sbjct: 530 DVQPIYFDYDKYDITPKAIEELTKVVFIMQKFPNIKIKIESHTDSR---GKDSYNLKLSD 586 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341 +RA S ++ G+ RI G+ RL ++ + NRR D ++ + Sbjct: 587 NRAKSTRDYILSQGIDASRIESAIGYGESRLINKCKNGVKCTEEEHLLNRRSDFIIIQK 645 >gi|294146707|ref|YP_003559373.1| OmpA-family protein [Sphingobium japonicum UT26S] gi|292677124|dbj|BAI98641.1| OmpA-family protein [Sphingobium japonicum UT26S] Length = 288 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 71/261 (27%), Gaps = 8/261 (3%) Query: 87 QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146 Q ++ + T I S + Q + + ++ Sbjct: 28 QTQEAPAADVSATAYLPAEKTAGPEIKGIISARSGDKMQVTAADGTKSVIAINDATKISA 87 Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 ++ +T L + + K L+ A I + + Sbjct: 88 SKGLFGLNRNRLAATSLLNGLPVTVKTLQSGEGLVASQINLQNKDLK-TASMIHNGTAQG 146 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 + I + FD ++ + L + + Sbjct: 147 FEEQTAATAALRGRMGEIDQYNVKSTTNVNFDTGKAVLSAQAKNDLCATAATAEGMSNAL 206 Query: 267 S-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324 + G+TD++ N LS RA L ++ G R+ +G A ++ Sbjct: 207 LLVVGYTDST---GDDEFNQELSEKRAGRVVNYLQQACGWKPYRMLTPTGMAEADPVASN 263 Query: 325 DP--MNSANRRIDILVEDRQG 343 D + NRR+ + + +G Sbjct: 264 DTIEGKAQNRRVAVNILVSKG 284 >gi|262066137|ref|ZP_06025749.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC 33693] gi|291380232|gb|EFE87750.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC 33693] Length = 93 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 5/96 (5%) Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 +L + + + + +++ GHTD+ + N LS RA + L++ G++E+ Sbjct: 1 YFEMLNNLKDFIEQNNYEVTLEGHTDSI---GSNQYNIGLSRRRAEAVKAKLIEFGLAEE 57 Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 RI I ++ NRR++ + R Sbjct: 58 RIVGIEAKGEEYPVATNETPEGRLQNRRVEFRLVQR 93 >gi|325920959|ref|ZP_08182848.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas gardneri ATCC 19865] gi|325548579|gb|EGD19544.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas gardneri ATCC 19865] Length = 400 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 13/116 (11%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 +FD + P+ VL + L +T+ + +RGHTDA + N LS Sbjct: 289 NERILFDFDKAGIRPDAARVLDVLAAALGKVNTKDMQVRGHTDA---KGSNAYNQALSER 345 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------DP-MNSANRRIDILVE 339 RA + L G ++ + G+ + + +P NRR++I + Sbjct: 346 RADAVLAALRTRGAAQS--AGAKGYGESQPVAPNTLNGQDNPGGRQLNRRVEIFLR 399 >gi|254284085|ref|ZP_04959053.1| peptidoglycan-associated lipoprotein [gamma proteobacterium NOR51-B] gi|219680288|gb|EED36637.1| peptidoglycan-associated lipoprotein [gamma proteobacterium NOR51-B] Length = 180 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 6/115 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD 283 + + + + F SS + + + +L S E I + GHTD Sbjct: 69 LKDAAMAAGSVFYFAFDSSELNDASRMAIDAHIALLLVSDESIRLEGHTDER---GTREY 125 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 N L RA + ++ +GV RI IS + + + S NRR+++ Sbjct: 126 NLALGERRANAVRDYMVANGVPSYRIETIS-YGEENPIAFGSGEANWSENRRVEL 179 >gi|126662535|ref|ZP_01733534.1| OmpA family protein [Flavobacteria bacterium BAL38] gi|126625914|gb|EAZ96603.1| OmpA family protein [Flavobacteria bacterium BAL38] Length = 621 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 15/147 (10%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + +V + ++ ++ T +++ F+ + S + L K+ V+ Sbjct: 485 KAENEQVVVEALLNPIIPIITEKEVILQ------PIFFEFNKSNITADGAAELDKLVAVM 538 Query: 260 AHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E++ HTD+ N +LS RA S Q L+ GV+++RI GF Sbjct: 539 NEYPEMVIFAKSHTDSR---GSDSYNIKLSDRRAKSTVQYLISKGVAKERI-SGQGFGES 594 Query: 319 RLKIA----SDPMNSANRRIDILVEDR 341 K+A ++ ++ NRR + L+ + Sbjct: 595 EPKVACKSCTEEEHAQNRRSEFLIVKK 621 >gi|94500541|ref|ZP_01307072.1| motility protein, MotA family protein [Oceanobacter sp. RED65] gi|94427331|gb|EAT12310.1| motility protein, MotA family protein [Oceanobacter sp. RED65] Length = 336 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 2/210 (0%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + + K + G ++ S + L E + RL+ Sbjct: 64 DPAAYEDGNKVPSKWVIDLGGSPSVQDNVAVSETVDPTKVLQAEEIESAAEAIERARLES 123 Query: 195 LA-KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 L + + + + + TR G+ I I+D+ N PMF+ SS +L Sbjct: 124 LQSEVMDKINASATLTPYKDQLKVDITREGLRIQIVDKTNRPMFNPGSSRLKYYAEDILY 183 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARD-NWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 ++ +L ISI GHTD+S N NW LS RA +A + L +G+ ++I+++ Sbjct: 184 EMAPILQAVPNRISITGHTDSSGSANPWDTGNWELSAGRANAARRALADAGLDSEKIAQV 243 Query: 313 SGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 G DP + NRRI I+V +++ Sbjct: 244 VGMGDKAHFNIEDPTDPVNRRIAIVVLNKR 273 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 1/197 (0%) Query: 8 NQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 ++ + Q IIIK+ + G+WK+ ADF +MA FL++W+IN+++ + +A+ Sbjct: 2 DKFDQQQIIIKRVKKGGHGHH-GGAWKVALADFAMAMMALFLILWLINSSNQEEIEAVAG 60 Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YFN + S + + + + + + Sbjct: 61 YFNDPAAYEDGNKVPSKWVIDLGGSPSVQDNVAVSETVDPTKVLQAEEIESAAEAIERAR 120 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 ++ + + + +D K + ++ F P S+ K A Sbjct: 121 LESLQSEVMDKINASATLTPYKDQLKVDITREGLRIQIVDKTNRPMFNPGSSRLKYYAED 180 Query: 188 RKKRLQDLAKKISSTLS 204 + + + + + +S Sbjct: 181 ILYEMAPILQAVPNRIS 197 >gi|39937842|ref|NP_950118.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris CGA009] gi|192293627|ref|YP_001994232.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1] gi|39651702|emb|CAE30224.1| OmpA/MotB domain [Rhodopseudomonas palustris CGA009] gi|192287376|gb|ACF03757.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1] Length = 464 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ +S+ ++ +L ++ E I + GHTD+ N LS RA Sbjct: 363 FESASASIDKDSAALLDRLIETAMRCPNAKIEVAGHTDSD---GDPAFNQSLSEKRAREV 419 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 ++++G+S +R+ G+ +D + NRRID +V Sbjct: 420 VDYMVRAGLSPERLQAF-GYGSKIPVAGNDTDAGKAKNRRIDFVVR 464 >gi|153833252|ref|ZP_01985919.1| outer membrane protein [Vibrio harveyi HY01] gi|148870523|gb|EDL69438.1| outer membrane protein [Vibrio harveyi HY01] Length = 216 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 61/161 (37%), Gaps = 11/161 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-----FDK 239 A R+ LQ + SS L +A+ G+ T I Q++ + F Sbjct: 50 AQHRQGFLQIEQQSESSKLRQRLAEESKLGLDKSGCMTWISNQNNHQQSDGLVARLHFGF 109 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S P L ++ L+ I++ GHTD+ + N L L RA + +VL Sbjct: 110 DQSSLTPMGNKALTQLASSLSEGDSPITVEGHTDS---KGSEGYNQELGLQRALTTSKVL 166 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 GV RI + + ++ + NRR ++ V Sbjct: 167 STDGVERTRIV-VRSLGETQPIASNSTVEGRAQNRRSEVWV 206 >gi|332528097|ref|ZP_08404128.1| hypothetical protein RBXJA2T_19116 [Rubrivivax benzoatilyticus JA2] gi|332112668|gb|EGJ12461.1| hypothetical protein RBXJA2T_19116 [Rubrivivax benzoatilyticus JA2] Length = 215 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 25/174 (14%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 L E +R + L ++ L+ + Sbjct: 45 DLAERLRAEVQQRQAEAQRREALEHALAVPLAAGRVTLAGGRIGI--------------S 90 Query: 233 NTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFR----NIARDN 284 +F +S+ PE +L+ + L+ EV+ + G TD R DN Sbjct: 91 GNVLFAFNSAELQPEGRQLLKSLAGPLAAYLSARDEVLMVSGFTDDRQVRDGGRARFADN 150 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 W LS RA + + L++ GV + + F + ++ NRR++I Sbjct: 151 WELSAQRALTVTRALIEDGVPSSAVFAAA-FGAEQPVASNADAAGRALNRRVEI 203 >gi|126090250|ref|YP_001041705.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155] gi|125999881|gb|ABN63950.1| OmpA/MotB domain protein [Shewanella baltica OS155] Length = 333 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 9/128 (7%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR---GHT 272 + ++ + ++ ++ + I L ++ EVL + GH Sbjct: 198 TVIVETSPQTLTFSSKSMNVIWGFDATKLSHDFIEQLAEVVEVLNTYPQARVAVLAVGHA 257 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSA 330 D+ N LS RA + L++ GVS +I ++ G + + Sbjct: 258 DSI---GSEAYNQALSEKRAQTVANKLLELGVSPAQI-EVQGEGESHPVANNQTADGRAK 313 Query: 331 NRRIDILV 338 NRR+++ + Sbjct: 314 NRRVEVSI 321 >gi|253990531|ref|YP_003041887.1| hypothetical protein PAU_03057 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638897|emb|CAR67512.1| similar to putative membrane protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781981|emb|CAQ85145.1| similar to putative membrane protein [Photorhabdus asymbiotica] Length = 583 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 59/151 (39%), Gaps = 11/151 (7%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + L ++ + ++ VA+ K + I ++ + +FD + + Sbjct: 407 QGERLRPRLQAAIASDVAEPSEKKPVTTAVPQTISLN-----SLALFDVGQAKLKVGSTK 461 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 VL + I+I G+TD++ A N LSL RA + L+++ Sbjct: 462 VLVNALINIRAKPGWLIAITGYTDST---GDAAKNRALSLARAEAVRDWLLQTSDIPLAC 518 Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILV 338 + G R + +ANRR++I + Sbjct: 519 FAVQGEGATRPVATNSTAAGRAANRRVEIRL 549 >gi|110681204|ref|YP_684211.1| OmpA domain-containing protein [Roseobacter denitrificans OCh 114] gi|109457320|gb|ABG33525.1| OmpA domain protein [Roseobacter denitrificans OCh 114] Length = 625 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ + + +I +VL + + ++GHTD+ N LS RA S Sbjct: 497 FEPGSATIDAAALTTMDQIADVLRVCGDLKLEVQGHTDSQ---GREEMNRSLSQARAQSV 553 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L V G+ +D NRRI+ + + Sbjct: 554 LNELRARRVLTSNFIA-KGYGESNPIADNDTEEGREANRRIEFKLIRPE 601 >gi|296113590|ref|YP_003627528.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis RH4] gi|295921284|gb|ADG61635.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis RH4] Length = 171 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD S P+ +L + + L + + + GHTD N L Sbjct: 66 PSLVYFDFDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDER---GSREYNMSLGER 122 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 RA + L+ G+++ + IS F R ++ S NRR ++ Sbjct: 123 RAVAVRNYLLGKGINQASVEIIS-FGEERPIAFGTNEEAWSQNRRAEL 169 >gi|319778099|ref|YP_004134529.1| type IV / vi secretion system protein, dotu family [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171818|gb|ADV15355.1| type IV / VI secretion system protein, DotU family [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 440 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 79/246 (32%), Gaps = 14/246 (5%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 D + + QR I+ ++ + + + Sbjct: 201 DADAEGAPLSPNWKGVIASDEPQRFIVPIWVMALGAAVAAMTIHVGLSMALSSQAVELSA 260 Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 L +++ + S + K L + + + L + + Sbjct: 261 LVRALPPPARGDITRTSPKVDAPPPEKVDFALLPEFQAGAPADLRSALSG---TESVSLA 317 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPF-- 277 + I N +F S ++ + +V+ I++ GHTD+ P Sbjct: 318 KLTIQ---ASNPELFQSSRPQLTEGFEPLIGSLAKVILANQELIGNITVVGHTDSVPLQK 374 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 N N RLS RA + +L+++GV DR+ G A + NRR++ Sbjct: 375 TNPLSTNQRLSEARAQTIADMLVQNGVPRDRVHS-EGRAATDPVATDSTREGRALNRRVE 433 Query: 336 ILVEDR 341 +LVE R Sbjct: 434 VLVEKR 439 >gi|310816653|ref|YP_003964617.1| flagellar motor protein [Ketogulonicigenium vulgare Y25] gi|308755388|gb|ADO43317.1| flagellar motor protein [Ketogulonicigenium vulgare Y25] Length = 510 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 85/301 (28%), Gaps = 26/301 (8%) Query: 60 DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119 A+ + + + D + L + Sbjct: 190 AELTAMTLSLESERARAEETLTLLAAARAAQAELEGARDTALTDAEAQAALLALAQQQLS 249 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 ++++ N+Q + + + I + L+ Sbjct: 250 EQQEMSSQAQLQVEALNAQAAALRNQLGDLQGLLDASAVADSVAQVQIESLGSQLNAALA 309 Query: 180 KEKILAM-----KRKKRLQDLAKKISSTLSGLVADNIV-------KGVLFETTRTGILIS 227 + + +R++ + + + +L I+ Sbjct: 310 RVAAEERRARTLEEAERIRLEEEARRLAEEAESLEQYRSEFFGSLRALLDGQDGVQIVGD 369 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--------HSTEVISIRGHTDASPFRN 279 + +F+ S+ + + +L VI + GHTD +P Sbjct: 370 RFVFSSEVLFEAGSATLSAAGDAEIANVAALLRRIASEIPSQIDWVIRVDGHTDNTPLSG 429 Query: 280 I--ARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334 +NW LS RA S ++++ G+ +R+ +GF ++ ++ + NRRI Sbjct: 430 TGEFANNWELSQARALSVVLYMIQNEGIPPNRL-AANGFGEYQPLNPANTPEARAQNRRI 488 Query: 335 D 335 D Sbjct: 489 D 489 >gi|311748785|ref|ZP_07722570.1| putative OmpA family protein [Algoriphagus sp. PR1] gi|311748788|ref|ZP_07722573.1| putative OmpA family protein [Algoriphagus sp. PR1] gi|126577322|gb|EAZ81570.1| putative OmpA family protein [Algoriphagus sp. PR1] gi|126577325|gb|EAZ81573.1| putative OmpA family protein [Algoriphagus sp. PR1] Length = 805 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 11/113 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ L++ +L ++ I GHTD N LS RA + Sbjct: 684 FDFDKSMLRSVHKKELERTAIMLKRMPNLMLYIEGHTDQR---GDDAYNQSLSERRADAV 740 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRRIDILVEDRQ 342 L K G+ +R+ + + F + + M+ NRR ++ V Q Sbjct: 741 KAYLTKRGIEGERMEE-TWFGETKPVNDCSELDCTSAMHQLNRRTELRVGKSQ 792 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 49/122 (40%), Gaps = 12/122 (9%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARDNW 285 + + +D + VL K+GE++ + + G HTD+ N Sbjct: 526 QLPVYVDIVYYDLDKYQIREDAKPVLDKLGELMNRYEFLDLLVGSHTDSR---ASDEYNI 582 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRRIDILV 338 LS +RA + + + + + +RI ++ F +L + + NRR ++++ Sbjct: 583 TLSNNRAEAVTEYMAQYNIPAERI-RLEWFGEQQLVNDCGDGVPCPETDHQLNRRSELVL 641 Query: 339 ED 340 E Sbjct: 642 EA 643 >gi|226229138|ref|YP_002763244.1| hypothetical protein GAU_3732 [Gemmatimonas aurantiaca T-27] gi|226092329|dbj|BAH40774.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 457 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + PE+ L++I +L+ + + I GHTD A N LS RA + Sbjct: 355 FDTGKDVIRPESTPTLKEIAAMLSEHADLQLIIEGHTDNV---GAAPANLALSQRRADAV 411 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 L+ G+ R++ G A+ NRR++++ Sbjct: 412 RSALVSDYGIDGGRLTA-KGLGQTVPATANTTPEGRQQNRRVELV 455 >gi|302381967|ref|YP_003817790.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] gi|302192595|gb|ADL00167.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 200 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 11/165 (6%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + R ++ T + VL E ++ D F Sbjct: 43 DQVAVVDGRVDATDQRVAQVEGTAGQALERANAAQVLAEGKFMYEVVLSDDSVK---FPS 99 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 PE L ++ + L + + I+GHTDA N L RA + + Sbjct: 100 DRDALSPEAEQRLAELAQRLKAENKNVYLEIQGHTDA---AGPESYNDALGEARAEAVRR 156 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 L + G++ +R++ IS + + + NRR+ I+V Sbjct: 157 SLSRQGIALNRMATIS-YGEEAPVADNATPEGRAQNRRVAIVVLS 200 >gi|90407861|ref|ZP_01216037.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3] gi|90311036|gb|EAS39145.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3] Length = 339 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 8/125 (6%) Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275 + ++ I ++ F SS+ E++ L + E L + + + GHTDA Sbjct: 209 VKEKVQDKMMKIASEKVQVAFPFGSSVLSEESMQQLTPVIEHLKAYPDAKLFLVGHTDA- 267 Query: 276 PFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332 A N S+ RA + L + + + R+ +SG +D + NR Sbjct: 268 --SGPAEYNQTFSVKRADALATYLSEEFSIDKSRM-TVSGEGESMPIATNDTTEGRAMNR 324 Query: 333 RIDIL 337 R+ + Sbjct: 325 RVSVF 329 >gi|37704634|gb|AAR01589.1| OprF [Pseudomonas sp. MFY79] Length = 296 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P + ++ + + + + ++ GHTD+ N +LS RA + Sbjct: 214 FDFDKSVVKPNSYADVKNLADFMKQYPQTTTVVEGHTDSV---GPDAYNQKLSQRRADAV 270 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI 322 QVL+K G+ R+S + G+ R Sbjct: 271 KQVLVKDGIDAGRVSSV-GYGESRPVA 296 >gi|86608243|ref|YP_477005.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556785|gb|ABD01742.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 357 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 7/105 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S L +I +++ T+ I + GHTDA+ N LS RA + Sbjct: 249 LFAYDSDQIEAAAEPTLAEIAKLMRERTDLSILVVGHTDAT---GSFDYNLGLSRRRAEA 305 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L++ G+ + R+ + G ++ + NRR++++ Sbjct: 306 VVNRLVQLGIEQRRLYPV-GVGFSAPVASNTTEEGRAKNRRVELV 349 >gi|254467364|ref|ZP_05080775.1| OmpA/MotB [Rhodobacterales bacterium Y4I] gi|206688272|gb|EDZ48754.1| OmpA/MotB [Rhodobacterales bacterium Y4I] Length = 209 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ VL + + E + GHTDA N L L RA +A Sbjct: 66 FDFDSAQLDQTARAVLDQQAHWIRQFPEVRFRVFGHTDAV---GSDAYNRALGLRRARAA 122 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L+ G+S R+ + + I + NRR Sbjct: 123 VNYLVSRGISRSRLEAVISHGETQPLIPTPERERRNRR 160 >gi|189179677|dbj|BAG39458.1| outer membrane protein [Gluconacetobacter intermedius] Length = 364 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290 FD + + ++ + + H I + G+TD + P + N LS+ Sbjct: 255 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTSAHPGPRGEKYNLGLSMR 314 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA S L++ GV + I + G+ + + D NRR++I++ Sbjct: 315 RADSVKAELIRDGVPANAID-VHGYGEAHPLVPTGPDTREPQNRRVEIIL 363 >gi|170750721|ref|YP_001756981.1| peptidoglycan-associated lipoprotein [Methylobacterium radiotolerans JCM 2831] gi|170657243|gb|ACB26298.1| peptidoglycan-associated lipoprotein [Methylobacterium radiotolerans JCM 2831] Length = 164 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 40/114 (35%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ S+ P L K L I GH D N+ L R Sbjct: 54 DRVFFESDSTDLTPTATATLDKQAAWLQRYPRYTFIIEGHADER---GTREYNFSLGARR 110 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRRIDILVEDRQG 343 A + L G++ R+ +S + R +D S NRR I+++ G Sbjct: 111 AQAVNDYLATRGIAASRMRTVS-YGKERPVAVCNDISCWSQNRRAVIVLDRGAG 163 >gi|225012050|ref|ZP_03702487.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A] gi|225003605|gb|EEG41578.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A] Length = 299 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 7/117 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285 I +F+ I E ++ L+++ +L I + GHTD + N Sbjct: 187 QIPGLIQLILFETDQDILTEEALISLEEVYSILIQYPNLNIIVEGHTDDT---GGVNYNQ 243 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 LS + + L+ G+S +I + + R + NRR+ + + Sbjct: 244 ELSEKIVATVLRFLINRGISSSKIKSAA-YGETRPLRTNSTSEGRRYNRRVQFNINE 299 >gi|300902742|ref|ZP_07120699.1| OmpA family protein [Escherichia coli MS 84-1] gi|300405215|gb|EFJ88753.1| OmpA family protein [Escherichia coli MS 84-1] Length = 211 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 10/139 (7%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + G Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALITQGVDASRI-RTQGLG 192 Query: 317 HHRLKIASDPMN--SANRR 333 ++ + NRR Sbjct: 193 PANPIASNSTAEGKAQNRR 211 >gi|255038851|ref|YP_003089472.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254951607|gb|ACT96307.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 673 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 86/262 (32%), Gaps = 11/262 (4%) Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 +N + D I+ T + ++ + + N Sbjct: 415 PENLGPAINSPLWDAFINIPATGDYAYFSASDKVLGQEDIFRIRMTPEIKPDPVAVVSGN 474 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS----S 201 ++ K + D + S N P + E L + K+ + A S Sbjct: 475 VFEAETTKPVKSEITADFKNSNNTFAKANFDPETGEYRLILPLKEVYRISASGEGYFPVS 534 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L+ DN + + I + + MF +SS+ P ++V L +I E + Sbjct: 535 EDMDLLGDNAFRTIRKNIYLHPIKAGQQIRLSNTMFSQSSAEVTPASLVELDRIAETMQT 594 Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + I + GHTD + N +LS DR + L+ G+ RI + R Sbjct: 595 YPTMEILLEGHTDNQ---GEVQKNVKLSADRVEQVKKYLLSKGIDGRRIQT-KAWGPARP 650 Query: 321 KIASDPM--NSANRRIDILVED 340 ++ NRR++ + Sbjct: 651 IASNLTEQTRQKNRRVEFTILK 672 >gi|149369527|ref|ZP_01889379.1| outer membrane protein, peptidoglycan-associated lipoprotein [unidentified eubacterium SCB49] gi|149356954|gb|EDM45509.1| outer membrane protein, peptidoglycan-associated lipoprotein [unidentified eubacterium SCB49] Length = 631 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 13/143 (9%) Query: 207 VADNIVKGVLFETTRTGILISIIDQR---NTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 V + V I I + + N FD P+ L K+ ++ Sbjct: 492 VPAGHDENVRVTIALKPIEDIIKEDKIVLNPIYFDYDKHNIKPQAAFELDKVVTLMKKYP 551 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 ++ HTD+ N LS RA + Q ++ GV E RIS + G Sbjct: 552 TMVVRAESHTDSR---ATEAYNLALSNRRAQATVQYIISKGVDEARISGV-GKGESTPIN 607 Query: 323 A-----SDPMNSANRRIDILVED 340 + +D +S NRR + + + Sbjct: 608 SCGDKCTDEQHSKNRRSEFTIVE 630 >gi|328947766|ref|YP_004365103.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489] gi|328448090|gb|AEB13806.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489] Length = 490 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 14/170 (8%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 L KE++ + + + + V TGI I++ + R F Sbjct: 322 LDKEQLEHKVSVPKKDKNYYIAYHQIKKYFFERKIPDVDLNEVLTGIQITMQNLR----F 377 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 S LP+ + +I E L + I I GHT N LS+ RA Sbjct: 378 IADSYELLPQEKPRIAQIAESLKKATSSGEYTILIEGHTADVNKPNGQ---MTLSIQRAQ 434 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + L+ +G+ ++ + GF + + + NRR++I++ + Sbjct: 435 EIIKELVSNGIDKN-LFTYRGFGGTKPVADNSTPQGRALNRRVEIIIMPK 483 >gi|257091971|ref|YP_003165612.1| hypothetical protein CAP2UW1_0326 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044495|gb|ACV33683.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 214 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 17/158 (10%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGI---LISIIDQR----NTPMFDKSSSIPLP 246 +LA + + + + + L + + +++ + R + +F +S P Sbjct: 42 ELATHLEAEVQKRQMEEKRRMALEKALAIPLATGRVTLNNGRIGISGSVLFALNSDQLQP 101 Query: 247 ETIVVLQKIGEVLAHSTEVI----SIRGHTDASPF---RNIARDNWRLSLDRAYSAYQVL 299 ++L+ + L + G TD P + DNW LS RA + + L Sbjct: 102 AGRLLLKSLVAPLRVYLGERDELLMVSGFTDDVPIQHGNSRFVDNWELSAQRALTVTRAL 161 Query: 300 MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335 + G+ I + F + ++ D S NRR++ Sbjct: 162 IDEGMPSSLIFAAA-FGTEQPVASNADDRGRSQNRRVE 198 >gi|153873003|ref|ZP_02001734.1| outer membrane protein ompA [Beggiatoa sp. PS] gi|152070531|gb|EDN68266.1| outer membrane protein ompA [Beggiatoa sp. PS] Length = 301 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 9/111 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARD-----NWRLSLD 290 F+ S++ + LQKI VL ++ ++GH+DA P+R ++ N +LS Sbjct: 192 FNTSTTTLKQASTRQLQKIASVLKMVDPTMVKVKGHSDAQPWRGRSQSESKRLNLKLSQQ 251 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPM-NSANRRIDILVE 339 RA S VL+ G +++ G+ + + + P + NRR++I V+ Sbjct: 252 RAESVKNVLVNEGF-PKNLTQAKGYGSNDPLVLGNSPAIWAKNRRVEIEVK 301 >gi|269103827|ref|ZP_06156524.1| putative OmpA family protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268163725|gb|EEZ42221.1| putative OmpA family protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 229 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 10/143 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L G+ I++++ N F + + L + Sbjct: 89 YMDVQAAKLRKQLASSGITVTRNGNNIVLNM---PNEITFGVDQTTLNQRAMNALHNVAL 145 Query: 258 VLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V +++ G TD++ A N RLS RA L++ GV+ +R+ G Sbjct: 146 VAKEYNKTQLNVYGFTDST---GAASYNQRLSQVRAAEVGNYLIRQGVAANRVVS-QGMG 201 Query: 317 HHRLKIASDPM--NSANRRIDIL 337 + + NRR+ I+ Sbjct: 202 EASPIATNSTAAGRAENRRVQIV 224 >gi|312796631|ref|YP_004029553.1| Chemotaxis motB protein [Burkholderia rhizoxinica HKI 454] gi|312168406|emb|CBW75409.1| Chemotaxis motB protein [Burkholderia rhizoxinica HKI 454] Length = 216 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + +++++ K + L+G +A R ++ I + + Sbjct: 43 QLSAKLENEVRQRQMETQRRKTLEQVLAGPLAAG----------RVTLVNGRIGISGSVL 92 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS----TEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S PE +L+ + + L E++ + G D R DNW LS Sbjct: 93 FALNSDQLQPEGRELLKSLAKPLRSYLSARDEILMVSGFADDQQVRAGNRRFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + + GV + + F + ++ D + NRR++I Sbjct: 153 QRALTVTRAFISEGVPASSVFAAA-FGSEQPVSSNADDAGRARNRRVEI 200 >gi|303245612|ref|ZP_07331895.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ] gi|302492875|gb|EFL52740.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ] Length = 345 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 8/143 (5%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 I L + + L I I+ + FD PE + VL++ Sbjct: 203 NCIELGEELLRNEAARERFLECALYEWIEDEIV-VFRSIYFDFDKYNIKPEFVPVLEEGT 261 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 ++ + I G+TD+ + N +L RA S +K G+ RI IS Sbjct: 262 AIIKSKPTMKVILEGNTDSI---GTPQYNMKLGQRRADSVKAFFVKKGIDASRIEAIS-L 317 Query: 316 AHHRLKIASDPM--NSANRRIDI 336 + + NRR I Sbjct: 318 GLTDPVATNKTAQGRALNRRCVI 340 >gi|153806760|ref|ZP_01959428.1| hypothetical protein BACCAC_01032 [Bacteroides caccae ATCC 43185] gi|149131437|gb|EDM22643.1| hypothetical protein BACCAC_01032 [Bacteroides caccae ATCC 43185] Length = 238 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + + +F ++ L K Sbjct: 74 KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 132 Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + +SI G+TD ++N N LS +RA S L+ GVS ++I Sbjct: 133 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 192 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G ++D NRR+++ + + Sbjct: 193 KGVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 227 >gi|58040218|ref|YP_192182.1| Outer membrane protein [Gluconobacter oxydans 621H] gi|58002632|gb|AAW61526.1| Outer membrane protein [Gluconobacter oxydans 621H] Length = 379 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 7/111 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290 FD S ++ + + H I + G+TD S P + N LS Sbjct: 270 VFFDWDKSDLTGRAREIVAQAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNLGLSNR 329 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 RA S L++ GV I I G+ + + + + NRR++I+++ Sbjct: 330 RASSVKAELIRDGVPAAAID-IHGYGESKPLVPTGPNTREPQNRRVEIILK 379 >gi|78063205|ref|YP_373113.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383] gi|77971090|gb|ABB12469.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 226 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 3/93 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSL 289 +F+ + LP++ VL +I + L+ T I + GHTD+ P N NW LS Sbjct: 115 DAKILFNVGDARLLPDSSPVLNQIAQALSDHATGDILVEGHTDSVPIANAKYESNWELSS 174 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 RA S + L + GV+ R++ I G A + + Sbjct: 175 ARAGSVVRYLTERGVAPHRLAAI-GRADTQPLV 206 Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 18/36 (50%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIIN 55 + + G W I YAD +T LM FL ++++ Sbjct: 13 RDDDELEGAQSGRWLISYADLITTLMVLFLALYVLQ 48 >gi|312968985|ref|ZP_07783192.1| outer membrane protein A [Escherichia coli 2362-75] gi|312286387|gb|EFR14300.1| outer membrane protein A [Escherichia coli 2362-75] Length = 346 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|307552789|gb|ADN45564.1| outer membrane protein A [Escherichia coli ABU 83972] Length = 350 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 222 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|218688793|ref|YP_002397005.1| outer membrane protein A [Escherichia coli ED1a] gi|218426357|emb|CAR07182.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli ED1a] Length = 346 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|215486075|ref|YP_002328506.1| outer membrane protein A [Escherichia coli O127:H6 str. E2348/69] gi|215264147|emb|CAS08491.1| outer membrane protein A (3a; II*; G; d) [Escherichia coli O127:H6 str. E2348/69] Length = 346 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|161520471|ref|YP_001583898.1| DotU family type IV/VI secretion system protein [Burkholderia multivorans ATCC 17616] gi|189353338|ref|YP_001948965.1| putative OmpA/MotB family outer membrane protein [Burkholderia multivorans ATCC 17616] gi|160344521|gb|ABX17606.1| type IV / VI secretion system protein, DotU family [Burkholderia multivorans ATCC 17616] gi|189337360|dbj|BAG46429.1| putative OmpA/MotB family outer membrane protein [Burkholderia multivorans ATCC 17616] Length = 405 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 60/157 (38%), Gaps = 9/157 (5%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + +RL + L + V ++++ R MF + P Sbjct: 251 REAQRLSPFDALARNLERRLRDEVAAGNVELIRDPARHVLTL---RFAGMFVPGAVTVAP 307 Query: 247 ETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG 303 V+ G +A E + +R G+ D++P + + N LS RA ++L+ +G Sbjct: 308 WGASVVASAGREIASIAEGMVVRVVGYADSAPAGSARQVSNQALSEARAEDVARILVAAG 367 Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 V + ++ G + + NRR++++V Sbjct: 368 VPAHGL-RVEGRGDADALADNGTESGRARNRRVEVIV 403 >gi|218557855|ref|YP_002390768.1| outer membrane protein A [Escherichia coli S88] gi|7188818|gb|AAF37887.1|AF234269_1 outer membrane protein A [Escherichia coli RS218] gi|218364624|emb|CAR02310.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli S88] gi|294493105|gb|ADE91861.1| outer membrane protein A [Escherichia coli IHE3034] gi|323953341|gb|EGB49207.1| OmpA transmembrane domain-containing protein [Escherichia coli H252] gi|323958256|gb|EGB53965.1| OmpA transmembrane domain-containing protein [Escherichia coli H263] Length = 346 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|218778894|ref|YP_002430212.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760278|gb|ACL02744.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] Length = 215 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +S P L + VL + +SI GH + + A N LSL RA + Sbjct: 111 FDLNSMELNPAARSALDAVSSVLHVNKAVKLSIEGHACS--AGDNAAYNNYLSLQRAQAV 168 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 L+ GV R+ ++G+ ++ ++ NRR++I+ Sbjct: 169 KDYLISRGVDGARM-SVTGYGANQPVKDNNSRAHRIQNRRVEIV 211 >gi|110641146|ref|YP_668876.1| outer membrane protein A [Escherichia coli 536] gi|331657022|ref|ZP_08357984.1| outer membrane protein A [Escherichia coli TA206] gi|110342738|gb|ABG68975.1| outer membrane protein A [Escherichia coli 536] gi|222032681|emb|CAP75420.1| Outer membrane protein A [Escherichia coli LF82] gi|331055270|gb|EGI27279.1| outer membrane protein A [Escherichia coli TA206] Length = 346 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|86747898|ref|YP_484394.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] gi|86570926|gb|ABD05483.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] Length = 464 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 79/276 (28%), Gaps = 9/276 (3%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 + +NL ++ P Q D V R Sbjct: 195 EAIGAALRNLPEGYAVAANDIKAPPYVFQANKDPVASTLTLTGYVPDNNVHAALAAAAGR 254 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + + S + + L + + Sbjct: 255 KFFSEKVVDQLKASIGAPQGFAGAVAPALGALSRLSTGTLVVSDREVRLSGDALFEAAVS 314 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + + L + + + L V + + ++T F+ +S+ Sbjct: 315 QIRSELNKDMPQGWTVKAELSVKPAASPVDASVCQQLFDDLLG--KSTVRFESASATIDK 372 Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 ++ +L ++ E I + GHTD+ N LS RA + ++++G++ Sbjct: 373 DSAGLLDRLIETAMRCPGASIEVAGHTDSDGEAG---FNQALSEKRARAVVDYMVRAGLT 429 Query: 306 EDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 +R G+ +D + NRRID ++ Sbjct: 430 PERFQAF-GYGSRIPLAGNDSDAGKAKNRRIDFVIR 464 >gi|189347858|ref|YP_001944387.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245] gi|189342005|gb|ACD91408.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245] Length = 416 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 88/308 (28%), Gaps = 31/308 (10%) Query: 44 LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103 +MA F++ + K+ + G + S+ ++ P LS+ Sbjct: 130 MMAPFVMAVL-------GKQVTSDNLDSEGLTSLLNSQKSAVQRAAPAGLPGVLGLLSLS 182 Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ-------QSEHCKNSLTRDSEKGKD 156 + N + L + ++ Q + + Sbjct: 183 QLGGAPPTVPIGIPGNIASFAKGLWPFLLGIAALAMLMKTCGQPPVKETPPPAAAVAPDT 242 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 ++D + L + +L I L + D Sbjct: 243 TAAASDTSTAAPDSAAVAADSLGAFGEYELPNGVKLNIPEFGIERKLIAFIEDATKPADK 302 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDAS 275 L+ FD + PE+ + I E+L + V G+TD Sbjct: 303 ETWFSFDRLV----------FDTGKATLKPESQEQIGNINEILKAFSAVSLKFGGYTDNV 352 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333 + N RLS DRA + ++K G+ + R+ G+ + NRR Sbjct: 353 ---GDPQANLRLSKDRAEAVMTEIVKLGIDKARLDA-EGYGAEHPVADNATEEGRQKNRR 408 Query: 334 IDILVEDR 341 +D V + Sbjct: 409 VDCRVTKK 416 >gi|302037886|ref|YP_003798208.1| putative OmpA/MotB family outer membrane protein [Candidatus Nitrospira defluvii] gi|300605950|emb|CBK42283.1| putative Outer membrane protein, ompA family [Candidatus Nitrospira defluvii] Length = 301 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F+ +S++ + V+ K+ L + E +I I GHTD+ N +LS R Sbjct: 194 EHIAFESNSAVLTSKGRAVVDKLVPALKRAPEAIIEIGGHTDSY---GDPEYNLQLSRTR 250 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 A + Q L++ V +R++ + G+ R + NRRI+ V++ + Sbjct: 251 AEAVRQYLVEHQV-PNRLTAV-GYGSTRPLSQDRTRAASKKNRRIEFRVKEER 301 >gi|254440394|ref|ZP_05053888.1| OmpA family protein [Octadecabacter antarcticus 307] gi|198255840|gb|EDY80154.1| OmpA family protein [Octadecabacter antarcticus 307] Length = 315 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 75/212 (35%), Gaps = 10/212 (4%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + + T + + +E+ L + + ++ Sbjct: 108 AVEIAGLATGKAEQEVLFGGLDQTLNDLITMVSEIQRQEQESGGATLDEALNQMARAIEK 167 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 ++ +++ + L + + V E + +S+ F S+ + ++ Sbjct: 168 AREAEEQLRANLQSEIEQGL---VTVEQRDGIVFVSLG---AGGAFPSGSADLTQQASII 221 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 ++++G V + + + GHTD P + RDNW L+ RA S Q + + + R Sbjct: 222 IEELGAVTSDPASRVIVSGHTDNVPISFGALYRDNWDLAAARAASVVQAIEATNPVQGRT 281 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 F + + NRRI+I +E Sbjct: 282 MSAVSFGQTQPIADNFTAEGREQNRRIEIEIE 313 >gi|330861523|emb|CBX71733.1| putative lipoprotein yfiB [Yersinia enterocolitica W22703] Length = 169 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +FD + +Q IG L + + + G+TDA N +LS R Sbjct: 62 NKVLFDSDVRKLNASGVQTVQNIGRALHNVGINHMRVDGYTDAI---GEDGYNQQLSFQR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A + L G+ I ++ G + + NRR+ I+V Sbjct: 119 ASAVADTLAAIGIPRANI-EVRGRGKLEPVADNRTAKGRAENRRVAIIVTAP 169 >gi|326559589|gb|EGE10003.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis 7169] gi|326562671|gb|EGE12973.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis 103P14B1] gi|326564691|gb|EGE14909.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis 46P47B1] gi|326565509|gb|EGE15680.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis 12P80B1] gi|326567731|gb|EGE17837.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis BC1] gi|326568633|gb|EGE18704.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis BC7] gi|326574224|gb|EGE24172.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis 101P30B1] gi|326575009|gb|EGE24938.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis O35E] Length = 171 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD S P+ +L + + L + + + GHTD N L Sbjct: 66 PSLVYFDFDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDER---GSREYNMSLGER 122 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 RA + L+ G+++ + IS F R ++ S NRR ++ Sbjct: 123 RAVAVRNYLLGKGINQASVEIIS-FGEERPIAFGTNEEAWSQNRRAEL 169 >gi|255318428|ref|ZP_05359661.1| OmpA/MotB domain protein [Acinetobacter radioresistens SK82] gi|262378658|ref|ZP_06071815.1| outer membrane protein [Acinetobacter radioresistens SH164] gi|255304420|gb|EET83604.1| OmpA/MotB domain protein [Acinetobacter radioresistens SK82] gi|262299943|gb|EEY87855.1| outer membrane protein [Acinetobacter radioresistens SH164] Length = 253 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++ +L+++ L I GHTD+ N+ LS +RA + Sbjct: 152 FESGSAVLTAAGRQILEEMAVALHKVGGKKVKIIGHTDS---SGDGNKNFLLSQERAMAV 208 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ + + +S G + + NRRI+ V Sbjct: 209 CNYLIAKNIKAENLST-EGMGSSKPVADNTTAEGRKKNRRIEFEVL 253 >gi|295690756|ref|YP_003594449.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756] gi|295432659|gb|ADG11831.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756] Length = 189 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 8/114 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLS 288 ++ F +++ PE L + E L + + I+GHTD N L Sbjct: 80 SDDSVKFPVNAATLSPEAEQRLSEFTEKLKADNKNVYLEIQGHTDN---SGSKEYNDELG 136 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA + + L + GV+ +R++ IS + ++ + NRR+ ++V Sbjct: 137 EKRAETVRKFLSQHGVALNRMATIS-YGQEAPVAPNETREGRAQNRRVVVMVLS 189 >gi|124008177|ref|ZP_01692874.1| OmpA family protein [Microscilla marina ATCC 23134] gi|123986276|gb|EAY26098.1| OmpA family protein [Microscilla marina ATCC 23134] Length = 515 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 6/114 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++T F ++ T +L I +L ++ + GHT N LS Sbjct: 402 KSTAYFYYTNDDINKATESLLNDIVVILKKHPDIYLELEGHTCN--IGETEDANQNLSER 459 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 RA + + L+ G+ E+R+ + G+ R ++ NRR+ + + Sbjct: 460 RASAVKKYLVNKGIDENRLKTV-GYGSKRPVASNKTEFGKIRNRRVKFKLVKTE 512 >gi|88798977|ref|ZP_01114558.1| OmpA/MotB [Reinekea sp. MED297] gi|88778204|gb|EAR09398.1| OmpA/MotB [Reinekea sp. MED297] Length = 300 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 107/299 (35%), Gaps = 17/299 (5%) Query: 50 VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 +++ I+ I Y + ++ Q E + Q + Sbjct: 10 LIFSISTLIVSLLVNILLY----QSHNDKNAELAEQAQTITELNDQLTQQRQLKSTQFAR 65 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQ--SEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 ++ T Q+L+ + LS QQ +E + + + + + K+ Sbjct: 66 LDEMTGQQTELASIIQQLQGELKTLSQQQQSSAETARQAQQQLATARSRIQTLDQELKTA 125 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + + ++ + ++ ++S+ L+ ++ + LI+ Sbjct: 126 QQSLEQARVTIHNQQRALRQTSATQASVSTELSTELAAQLSSYDRDISITTAADGTTLIN 185 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI----AR 282 I T +F ++ + VL + EVL + + GH DA P + Sbjct: 186 I---PLTLLFANTNLDLANDAETVLTSLSEVLKQHPDRRVQVIGHADARPIVSDLAQTYP 242 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVE 339 NW LS RA L+ GVS+ R+ SG A ++ A++ S NRRI++ ++ Sbjct: 243 TNWELSSARASRVVTFLIDQGVSDHRLLA-SGRAANQPVRDGANEEDWSVNRRIEVQIQ 300 >gi|329943863|ref|ZP_08292134.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328531569|gb|EGF58405.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 384 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 67/229 (29%), Gaps = 10/229 (4%) Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178 + +N ++ +Q+ + D++ + E + Sbjct: 105 STTDGSGANDNGFLEVTPGEQTTSYLSFGKVDTDTVTVMVPMAGFTTVSVLEADAAKKAG 164 Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + + + + + + T I +++ F Sbjct: 165 VDLNAASSELDQFPGAATELAAPVAIERYTRALDDSTSTHTGGQDITVTLASDVT---FA 221 Query: 239 KSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 S+ P LQ + + L +SI GHTD N LS RA + Sbjct: 222 SDSADLTPAADTQLQTVADQLNQYPDGGTLSIVGHTDDIQ---DDAYNQPLSEKRANAVK 278 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 L + + +G ++ +D +ANRR++I + G Sbjct: 279 DRLQQLTTLDKWSPTTTGKGESEPRVKETTDEARAANRRVEITLTPTGG 327 >gi|197336986|ref|YP_002157822.1| outer membrane protein [Vibrio fischeri MJ11] gi|197314238|gb|ACH63687.1| outer membrane protein [Vibrio fischeri MJ11] Length = 255 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 6/105 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ S + VL K+ + + + GHTD+ + + N+ L L RA Sbjct: 152 RVYFNFDKSTLTKRSEYVLDKLYSKMGEKDIKLKVEGHTDS---KGSSTYNYDLGLKRAN 208 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 YQ L++ G ++ S ++ + N NRR++I Sbjct: 209 IVYQYLVQQGAEPNQFSVVT-KGEREPIKTNKTANGREKNRRVEI 252 >gi|59713413|ref|YP_206188.1| outer membrane protein [Vibrio fischeri ES114] gi|59481661|gb|AAW87300.1| outer membrane protein [Vibrio fischeri ES114] Length = 253 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 6/105 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ S + VL K+ + + + GHTD+ + + N+ L L RA Sbjct: 150 RVYFNFDKSTLTKRSEYVLDKLYSKMGEKDIKLKVEGHTDS---KGSSTYNYDLGLKRAN 206 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 YQ L++ G ++ S ++ + N NRR++I Sbjct: 207 IVYQYLVQQGAEPNQFSVVT-KGEREPIKTNKTANGREKNRRVEI 250 >gi|159045641|ref|YP_001534435.1| OmpA domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157913401|gb|ABV94834.1| OmpA domain protein [Dinoroseobacter shibae DFL 12] Length = 617 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 78/292 (26%), Gaps = 15/292 (5%) Query: 57 TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116 T+ + + F + + + + + P + + V L+ Sbjct: 311 TNAALFERVAAEFEADLPAVFSLTSTLPRPEAPRPGIFDPNLTRFTATLSPEGLVQLRGH 370 Query: 117 STNQ-KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 T+ +K+ + + + S + + L L N Sbjct: 371 VTDTIRKEVTATMAKAMFGAPNVYSATTVAEDVPEGWSVRVLAGLEALGHLHNGSVTITP 430 Query: 176 PPLS-KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE------TTRTGILISI 228 + + A + L + S L D +L I Sbjct: 431 EFMRIGGRTGAEDGPAEIAGLLARRLPEESDLRLDVTYDPILDPATALPTPEECYARIDA 490 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287 I F+ SS E ++ +I +VL + I GHTD N L Sbjct: 491 IQAEGKITFEPGSSQIAAEAEAIMDRIAQVLVDCSHVEFEIAGHTDNQ---GREVMNLNL 547 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 S RA + L + + + G+ + NRRI Sbjct: 548 SQARADAVLAALSERRILTGNLVA-RGYGEAMPIADNSTAEGREANRRISFT 598 >gi|71064857|ref|YP_263584.1| OmpA family outer membrane protein [Psychrobacter arcticus 273-4] gi|71037842|gb|AAZ18150.1| possible outer membrane protein, OmpA family [Psychrobacter arcticus 273-4] Length = 533 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 56/175 (32%), Gaps = 7/175 (4%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 +N + L L + A + + + ++ + + + Sbjct: 312 VNAADTAALNKLVSDLQAAAPAMTVIAEGPLNEQTEIADSLTASEAAMDNLGQNPDPRDV 371 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 + F+ ++ +L + +++ + I GHTD + A N Sbjct: 372 ARALSLQVVNFEVDKALIPDANKALLDRAVKLMEQVPNMTLMIIGHTDKT---ADAAYNL 428 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 +LS +RA + L+ G ++ G + NRRI+ +V Sbjct: 429 KLSEERAQAMKAYLVAQGADPSKLMT-KGMGETDPIADNTTDQGRFRNRRIEFVV 482 >gi|332292047|ref|YP_004430656.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332170133|gb|AEE19388.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 650 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 48/131 (36%), Gaps = 18/131 (13%) Query: 226 ISIIDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278 I+I D + FD P+ + L+K+ V+ V+ R HTD+ Sbjct: 524 INIGDDLAKVLELNPIYFDFDRFNIRPDAALELEKVIAVMREYPNLVLDARSHTDSR--- 580 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSAN 331 N LS RA + ++ G+S RI G+ + S+ + N Sbjct: 581 GKDSYNLSLSDKRAKATVAYIINQGISSSRI-SGQGYGEKQPVNTCSNGVNCSEEEHQLN 639 Query: 332 RRIDILVEDRQ 342 RR + +V Sbjct: 640 RRSEFIVISNN 650 >gi|296162992|ref|ZP_06845769.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] gi|295886786|gb|EFG66627.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] Length = 248 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + F S++ P L V +++ G+TDA+ N LS Sbjct: 140 QGNANFATDSAMLSPIAKKNLDHFMSVNQGINLHRLTVVGYTDAT---GSEAHNLNLSQA 196 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + Q L G+ D+ G ++ NRR+D+ V Sbjct: 197 RAAAVVQYLRDGGLHVDQFVA-RGLGSADPVASNATAEGRMQNRRVDVRV 245 >gi|156977399|ref|YP_001448305.1| hypothetical protein VIBHAR_06186 [Vibrio harveyi ATCC BAA-1116] gi|156528993|gb|ABU74078.1| hypothetical protein VIBHAR_06186 [Vibrio harveyi ATCC BAA-1116] Length = 216 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 61/161 (37%), Gaps = 11/161 (6%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-----FDK 239 A R+ LQ + SS L +A+ G+ T I Q++ + F Sbjct: 50 AQHRQGFLQIEQQSESSKLRQRLAEVSKLGLDKSGCMTWISNQNNHQQSDGLVARLHFGF 109 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S P L ++ L+ I++ GHTD+ + N L L RA + +VL Sbjct: 110 DQSSLTPMGNKALTQLASSLSEGDSPITVEGHTDS---KGSEGYNQELGLQRALTTSKVL 166 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 GV RI + + ++ + NRR ++ V Sbjct: 167 STDGVERTRIV-VRSLGETQPIASNSTVEGRAQNRRSEVWV 206 >gi|146283137|ref|YP_001173290.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas stutzeri A1501] gi|145571342|gb|ABP80448.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas stutzeri A1501] gi|327481490|gb|AEA84800.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas stutzeri DSM 4166] Length = 167 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + GHTD N L R+ + Sbjct: 68 FEYDSSDLKPEAMRALDVHAKDLKGNGARVVLEGHTDER---GTREYNMALGERRSKAVQ 124 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 + L+ GVS ++ +S + R + + NRR+++ Sbjct: 125 RYLVLQGVSPAQLELVS-YGEERPVAMGNDEQSWAQNRRVEL 165 >gi|90417117|ref|ZP_01225045.1| outer membrane protein OprL precursor [marine gamma proteobacterium HTCC2207] gi|90331133|gb|EAS46389.1| outer membrane protein OprL precursor [marine gamma proteobacterium HTCC2207] Length = 177 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 6/113 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 + ++ FD ++ PE+ L + L +S + + GH D N Sbjct: 68 VEVMTADTVFYFDFDKALLKPESRAALLEHSASLQNSPRNVRLEGHADER---GTREYNM 124 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 L RA + + L+ GVS + ++ + R ++D NRR+++ Sbjct: 125 ALGERRANAVKEFLVLQGVSPG-LIEVISYGEERAAAYGSNDDAWGLNRRVEL 176 >gi|59713370|ref|YP_206145.1| flagellar motor protein MotB2 [Vibrio fischeri ES114] gi|59481618|gb|AAW87257.1| flagellar motor protein MotB2 [Vibrio fischeri ES114] Length = 213 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 63/153 (41%), Gaps = 12/153 (7%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +++++ + +V + V+ GI I D + ++D S+ PE ++ + Sbjct: 64 MQELTADIQEIVEQKNLDSVVVTAVTDGIRI---DLNSENLYDSGSASLKPEGKALISEF 120 Query: 256 GEVLAHST---EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 E + I + GH+D P NW LS RA + L+K V + ++ Sbjct: 121 AEAMKEVDLNGRSIIVEGHSDDLPIHTKQFDSNWELSGARAIEVTKQLIKFNVDKSQLRA 180 Query: 312 ISGFAHHRLKI----ASDPMNSANRRIDILVED 340 ++ +A + + + NRR+ I ++ Sbjct: 181 VA-YADAQPRADKALPIEQQRQLNRRVVIYIKR 212 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 21/212 (9%), Positives = 60/212 (28%), Gaps = 1/212 (0%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + W + Y+D +T+L+AFF+++ ++ ++ + ++ + + Sbjct: 3 RTRPKVELKDDNDWMMTYSDAITLLLAFFVLIVAVSQVNEGKLEELKDGWGKV-VDTAAH 61 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + E Q +D + +T L+ L + Sbjct: 62 LPMQELTADIQEIVEQKNLDSVVVTAVTDGIRIDLNSENLYDSGSASLKPEGKALISEFA 121 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + L S + + + E + + + + + Sbjct: 122 EAMKEVDLNGRSIIVEGHSDDLPIHTKQFDSNWELSGARAIEVTKQLIKFNVDKSQLRAV 181 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + + AD + ++I I Sbjct: 182 AYADAQPRADKALPIEQQRQLNRRVVIYIKRN 213 >gi|78484555|ref|YP_390480.1| OmpA/MotB [Thiomicrospira crunogena XCL-2] gi|78362841|gb|ABB40806.1| OmpA family protein [Thiomicrospira crunogena XCL-2] Length = 314 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 72/273 (26%), Gaps = 20/273 (7%) Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ-----S 140 Q P SS +++ T + +Q + ++ + L N Sbjct: 24 AQPPTPPSSFTAEKTLLEKAPTPEKLSSLYRDLDQDGVVDKQDHCLNSLPNQPVNAFGCE 83 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + D + E + L + + Sbjct: 84 ADEDHDGVVDRLDQCHKTPIGISVNEVGCEGDADLDGIIDSLDQCPGTLPGVVVNKAGCR 143 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSSIPLPETIVVLQK 254 + T G+ ++ + FD S P+ +L K Sbjct: 144 LDTDLDRDGVLNNKDQCPNTPIGVTVNQYGCEPKSLVVTNIVFDLGSYKIRPDQKPILDK 203 Query: 255 IGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311 L + I I G TD+ N +LS +RA + L++ I Sbjct: 204 DISQLRSLKDHERIVITGFTDSL---GSESSNLKLSWNRAQATKDYLVRKFKYDPASIL- 259 Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G + NRRI ++ D+Q Sbjct: 260 VLGKGEANPVATNKTKEGRKQNRRISFMIMDQQ 292 >gi|300697371|ref|YP_003748032.1| outer membrane protein; OmpA/MotB domain [Ralstonia solanacearum CFBP2957] gi|299074095|emb|CBJ53637.1| putative outer membrane protein; OmpA/MotB domain [Ralstonia solanacearum CFBP2957] Length = 279 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 86/278 (30%), Gaps = 10/278 (3%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 AI+ F P L + + + + + + K Sbjct: 5 LDAIKHGFRPAILALAATAACLGAALPAYGAPGDPAPATAANSVPGQVVAGGMVPDEATK 64 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 ++ +N N ++ + G K + + Sbjct: 65 ASVLARLRELYGSANVVDQIEVGNVVSPPNWTGNVQ-KILSPQIKQVNRGQLNIDGTQVA 123 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 ++ + + Q LA +++TL V + ++ + ++ ++ F+ S Sbjct: 124 VHGDVQNEAQRQQLASDMATTLGASYTIKNGLRVAAVSEQSLLDQTLANRIIE--FETGS 181 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + P+ +L ++ VL I GHTD N LS RA + L+ Sbjct: 182 ATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDN---SGSRAMNLNLSQARAETVKSYLI 238 Query: 301 KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 G ++ I G + A+ D S NRRI+ Sbjct: 239 NKGAEPGTLTAI-GVGPDQPVAANTTDEGRSRNRRIEF 275 >gi|197336843|ref|YP_002157778.1| chemotaxis MotB protein [Vibrio fischeri MJ11] gi|197314095|gb|ACH63544.1| chemotaxis MotB protein [Vibrio fischeri MJ11] Length = 213 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 63/153 (41%), Gaps = 12/153 (7%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +++++ + +V + V+ GI I D + ++D S+ PE ++ + Sbjct: 64 MQELTADIQEIVEQKNLDSVVVTAVTDGIRI---DLDSENLYDSGSASLKPEGKALISEF 120 Query: 256 GEVLAHST---EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 E + I + GH+D P NW LS RA + L+K V + ++ Sbjct: 121 AEAMKEVDLNGRSIIVEGHSDDLPIHTKQFDSNWELSGARAIEVTKQLIKFNVDKSQLRA 180 Query: 312 ISGFAHHRLKI----ASDPMNSANRRIDILVED 340 ++ +A + + + NRR+ I ++ Sbjct: 181 VA-YADAQPRADKALPIEQQRQLNRRVVIYIKR 212 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 21/212 (9%), Positives = 60/212 (28%), Gaps = 1/212 (0%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + W + Y+D +T+L+AFF+++ ++ ++ + ++ + + Sbjct: 3 RTRPKVELKDDNDWMMTYSDAITLLLAFFVLIVAVSQVNEGKLEELKDGWGKI-VDTAAH 61 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + E Q +D + +T L+ L + Sbjct: 62 LPMQELTADIQEIVEQKNLDSVVVTAVTDGIRIDLDSENLYDSGSASLKPEGKALISEFA 121 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + L S + + + E + + + + + Sbjct: 122 EAMKEVDLNGRSIIVEGHSDDLPIHTKQFDSNWELSGARAIEVTKQLIKFNVDKSQLRAV 181 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + + AD + ++I I Sbjct: 182 AYADAQPRADKALPIEQQRQLNRRVVIYIKRN 213 >gi|319409315|emb|CBI82959.1| Outer membrane lipoprotein omp16 homolog [Bartonella schoenbuchensis R1] Length = 173 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + F +SS + VL++ E L ++ GH D N L R Sbjct: 62 DRVFFSLNSSSIELDAEYVLKRQAEWLLRYPHYFVTVEGHADDR---GTREYNLALGQRR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 + + L+ GVS R+ IS + R + NRR+ + + G Sbjct: 119 SIAVRDYLVSLGVSSQRMKTIS-YGKERPVAVCDDISCWNQNRRVVLTINSGNG 171 >gi|308049357|ref|YP_003912923.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] gi|307631547|gb|ADN75849.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] Length = 354 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F SS + + I +L + + I+G D++ ++ N LS RA + Sbjct: 249 FGFDSSELTDLSPLS-DIIERLLRYPDAQVFIQGFADST---GRSQYNLSLSHRRAQAVA 304 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 L GV DRI +I F I + + NRR+ + + Sbjct: 305 DYLQSQGVEPDRI-RIEDFGERLPVIDNATAEHRAQNRRVHLYI 347 >gi|189179676|dbj|BAG39457.1| outer membrane protein [Gluconacetobacter intermedius] Length = 373 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290 FD + + ++ + + H I + G+TD + P + N LS+ Sbjct: 264 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTSAHPGPRGEKYNLGLSMR 323 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA S L++ GV + I + G+ + + D NRR++I++ Sbjct: 324 RADSVKAELIRDGVPANAID-VHGYGEAHPLVPTGPDTREPQNRRVEIIL 372 >gi|129138|sp|P24754|OMPA_ESCHE RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II gi|146987|gb|AAA24234.1| outer membrane protein II [Escherichia hermannii] gi|146995|gb|AAA24238.1| outer membrane protein II [Escherichia hermannii] Length = 243 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 124 KSDVLFNFNKATLKPEGQQALDQMYTQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 180 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 181 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 239 Query: 338 VED 340 V+ Sbjct: 240 VKG 242 >gi|325855004|ref|ZP_08171720.1| OmpA family protein [Prevotella denticola CRIS 18C-A] gi|327313291|ref|YP_004328728.1| OmpA family protein [Prevotella denticola F0289] gi|325483982|gb|EGC86922.1| OmpA family protein [Prevotella denticola CRIS 18C-A] gi|326945391|gb|AEA21276.1| OmpA family protein [Prevotella denticola F0289] Length = 225 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 55/144 (38%), Gaps = 8/144 (5%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K++ + + + V V + ++ + +F + S L K Sbjct: 74 MDKVARETAQTLPNARVDKVTDANGLECVKVTF---DSGILFPLNGSKLSASAKNDLTKF 130 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++ ++ I+G+TDA N LS RA + L GV+ +I + G Sbjct: 131 AALMKRNSNCDVAIQGYTDA---SGNDNINLPLSQRRAEAVSSYLKGRGVTGRQIRSVQG 187 Query: 315 FAHHRLKIASDPMNSANRRIDILV 338 F + ++ ANRR+++ + Sbjct: 188 FGSSNPI-ENKTISQANRRVEVYL 210 >gi|255264472|ref|ZP_05343814.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62] gi|255106807|gb|EET49481.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62] Length = 227 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ VL++ + + E + GHTD N +L L RA + Sbjct: 82 FPFNSNALDENARAVLRQQADWIRQFPEVRFKVYGHTD---LVGGTAYNRQLGLRRAQAV 138 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L G+S R+ ++ F R I ++ NRR Sbjct: 139 VIYLTSQGISRSRLEAVASFGETRPVIQTNGQERRNRR 176 >gi|326568759|gb|EGE18829.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis BC8] Length = 171 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD S P+ +L + + L + + + GHTD N L Sbjct: 66 PSLVYFDFDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDER---GSREYNMSLGER 122 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 RA + L+ G+++ + IS F R ++ S NRR ++ Sbjct: 123 RAVAVRNYLLGKGINQASVEIIS-FGEERPIAFGTNEEAWSQNRRAEL 169 >gi|194337185|ref|YP_002018979.1| peptidoglycan-associated lipoprotein [Pelodictyon phaeoclathratiforme BU-1] gi|194309662|gb|ACF44362.1| peptidoglycan-associated lipoprotein [Pelodictyon phaeoclathratiforme BU-1] Length = 173 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 FD S+ E L + G + + + I GH D + N L R Sbjct: 68 GDVFFDYDSATLSAEAQEQLHQNGVWMGSNARKGALIEGHCDER---GTSEYNLALGDRR 124 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339 A SA + L++ GV+ R+ +S + R +++ + NRR +V+ Sbjct: 125 AISAKEYLVRFGVAPSRLETVS-YGEERPFAAGSNEESWAKNRRAHFVVK 173 >gi|170728573|ref|YP_001762599.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908] gi|169813920|gb|ACA88504.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908] Length = 224 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 50/144 (34%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + L GV + I++++ N F + VL + Sbjct: 84 YMDTQEAELRKQLQSTGVSVTRSGDNIILNM---PNEVTFGVDETHLSAGAKRVLNSVAL 140 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V + ++ G TD+ N RLS RA L+ V R+ G Sbjct: 141 VAKEYDKTRLNVLGFTDS---SGSESYNLRLSKVRAVEVADYLVSQKVEYVRVKS-DGMG 196 Query: 317 HHRLKIASDP--MNSANRRIDILV 338 R ++ + NRR++I++ Sbjct: 197 EERPIASNATKEGRAENRRVEIIL 220 >gi|160885976|ref|ZP_02066979.1| hypothetical protein BACOVA_03981 [Bacteroides ovatus ATCC 8483] gi|260170568|ref|ZP_05756980.1| OmpA family outer membrane protein [Bacteroides sp. D2] gi|315918915|ref|ZP_07915155.1| outer membrane protein [Bacteroides sp. D2] gi|156108789|gb|EDO10534.1| hypothetical protein BACOVA_03981 [Bacteroides ovatus ATCC 8483] gi|313692790|gb|EFS29625.1| outer membrane protein [Bacteroides sp. D2] Length = 238 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + + +F ++ L K Sbjct: 74 KKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDSG-ILFTTGNANLSAAAKSALSKFA 132 Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + +SI G+TD ++N N LS +RA S L+ GVS ++I Sbjct: 133 NNVLNQNRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQI 192 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G ++D NRR+++ + + Sbjct: 193 KGVQGMGESDPVASNDTAAGREQNRRVEVYMYASE 227 >gi|281178081|dbj|BAI54411.1| outer membrane protein OmpA [Escherichia coli SE15] gi|323190770|gb|EFZ76039.1| outer membrane protein A [Escherichia coli RN587/1] Length = 350 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 222 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|239818112|ref|YP_002947022.1| OmpA/MotB domain protein [Variovorax paradoxus S110] gi|239804689|gb|ACS21756.1| OmpA/MotB domain protein [Variovorax paradoxus S110] Length = 219 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 7/113 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD S VL + L ++ + I GHTD + N LS+D Sbjct: 107 PSDVSFDVGRSNIKSNFAPVLDQFASGLRNNPNAEVRIIGHTDNT---GSDAINNPLSVD 163 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA S L+ GVS +I G H ++ + NRR++I V +R Sbjct: 164 RAASTRDYLVARGVSAAAF-RIEGRGSHEPIANNNSDAGRAQNRRVEIYVGER 215 >gi|192290369|ref|YP_001990974.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1] gi|192284118|gb|ACF00499.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1] Length = 441 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 7/118 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 +S + F++ S++ + +L K+ + I + G+TD Sbjct: 328 RVSALASAEKINFERRSAVIDKASQPLLDKLAAAIKQCPAVTIEVAGYTD---GAGKKSA 384 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 N LS RA + L K G+ ++ G+ + A+D + NRRI+ +V+ Sbjct: 385 NVALSKRRAEAVVASLTKVGIGSVKLVA-EGYGSAKPIAANDTAEGRAQNRRIEFVVK 441 >gi|117623167|ref|YP_852080.1| outer membrane protein A [Escherichia coli APEC O1] gi|115512291|gb|ABJ00366.1| OmpA [Escherichia coli APEC O1] Length = 370 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 242 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 298 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 299 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 357 Query: 338 VED 340 V+ Sbjct: 358 VKG 360 >gi|3915781|sp|P24017|OMPA_KLEPN RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II; Flags: Precursor gi|3201545|emb|CAA04450.1| outer membrane protein A [Klebsiella pneumoniae] Length = 344 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + G+TD N +LS Sbjct: 216 KSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRI---GSEAYNQQLS 272 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +IS G + +A +RR++I Sbjct: 273 EKRAQSVVDYLVAKGIPAGKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 331 Query: 338 VED 340 V+ Sbjct: 332 VKG 334 >gi|70732082|ref|YP_261838.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens Pf-5] gi|68346381|gb|AAY93987.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens Pf-5] Length = 165 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 66 FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GVS ++ +S + R + NRR+++ Sbjct: 123 RYLVLQGVSPAQLELVS-YGKERPVATGHDEQSWAQNRRVEL 163 >gi|330824057|ref|YP_004387360.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans K601] gi|329309429|gb|AEB83844.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601] Length = 912 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 78/273 (28%), Gaps = 16/273 (5%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 + R ++ + G ++ + + Sbjct: 629 RPGQRADARAAAAHRGRHGQVARAQRRAARLLRGPGARGDRAERGCAKADHRRPAAGGRA 688 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 ++ E L + + L + + A+ + L + K Sbjct: 689 ACRGERGMTVHAGGELDDGLEPAAPVWAVFGDLMGGALGAFALILVCALGMQMELAERLK 748 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQR----NTPMFDKSSSIPLPETIVVLQ 253 + +++ D R + +F +S PE +L+ Sbjct: 749 TEQRQRAEQARRLTTLEQALAGPLAAGRVTLQDGRIGISGSVLFAFNSDELQPEGRQLLR 808 Query: 254 ----KIGEVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRAYSAYQVLMKSGV 304 + L E++ + G TD P R DNW LS RA + + L+ G+ Sbjct: 809 SLSAPLAAYLRERGEILMVSGFTDDRPMRGGGGNARFADNWELSAQRALTVTRALIDEGI 868 Query: 305 SEDRISKISGFAHHRLKIAS--DPMNSANRRID 335 ++ + F + ++ + NRR++ Sbjct: 869 PSAQVFAAA-FGAEQAVASNADAEGRARNRRVE 900 >gi|260773001|ref|ZP_05881917.1| outer membrane protein [Vibrio metschnikovii CIP 69.14] gi|260612140|gb|EEX37343.1| outer membrane protein [Vibrio metschnikovii CIP 69.14] Length = 222 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 64/208 (30%), Gaps = 9/208 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + +Q+ ++ L + + + + I A Sbjct: 18 AATQRQNATTGESETNAATRGALIGAVAGAAAGLATGDNAKQRRQRALIGATGGAAVGGG 77 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + L + + GV + L ++ N F +S L+ Sbjct: 78 VGYYFDQQEAALREELLHSGVQVQRVGDNQL--LLRMENGIGFQTNSYQLDSSIHRTLRG 135 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + ++L + + GHTD++ N LS RA S L+ GV+ R Sbjct: 136 VAKILVQYPDTSLVIDGHTDST---GGDTTNQVLSERRAESVRSFLLSQGVAPGRAIA-R 191 Query: 314 GFAHHRLKIASDP--MNSANRRIDILVE 339 G + + NRR+DI + Sbjct: 192 GNGSRFPICTNSTVEGRACNRRVDIQIL 219 >gi|89094432|ref|ZP_01167372.1| chemotaxis protein MotB [Oceanospirillum sp. MED92] gi|89081324|gb|EAR60556.1| chemotaxis protein MotB [Oceanospirillum sp. MED92] Length = 311 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 84/231 (36%), Gaps = 17/231 (7%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 S+ +++Y+ L + + + N + + I+ E Sbjct: 36 AISSVNEEKYKNLTDALAGVFVGLDQAIEVNPAPGQGKSESGFGIFIGGKHDIDVPEVTI 95 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 PP + L+ L +++ S + + + + I + Sbjct: 96 SPPD-------QEETDILKALQRELEVAFSQHIREG---QLRVVGNDLWLSIELRSNY-- 143 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAY 293 +F+ ++P +L++I +L + I + G TD NW LS RA Sbjct: 144 -LFESGGALPNILADQLLEQIAGMLKDKSNPIHVEGFTDNQQISTDEFPSNWELSAARAA 202 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + ++L + GV+ ++++ + G+ + ++ NRR+ I+V + Sbjct: 203 AVVRLLSQFGVNPEQMAAV-GYGEFQPAYSNRTAEGQRLNRRVLIVVSRDE 252 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 3/94 (3%) Query: 31 GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90 W I YADF+T+L AFF+VM+ I++ +++ K + L A I P Sbjct: 14 DRWVISYADFITLLFAFFVVMYAISSVNEEKYKNLTDALAGVFVGLDQA---IEVNPAPG 70 Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + S++ + I + ++ I +Q++ Sbjct: 71 QGKSESGFGIFIGGKHDIDVPEVTISPPDQEETD 104 >gi|316936265|ref|YP_004111247.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315603979|gb|ADU46514.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1] Length = 464 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +S+ ++ +L ++ E I I GHTD+ N LS RA + Sbjct: 363 FDSASAGISKDSAGLLDRLIETAMRCPNARIEIAGHTDSD---GDDAFNQSLSEKRARAV 419 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 ++++GV+ +R+ G+ +D + NRRID +V Sbjct: 420 VDYMVRAGVTPERLQAF-GYGSKIPLSGNDSDAGKAKNRRIDFVVR 464 >gi|149913687|ref|ZP_01902220.1| hypothetical protein RAZWK3B_10301 [Roseobacter sp. AzwK-3b] gi|149812807|gb|EDM72636.1| hypothetical protein RAZWK3B_10301 [Roseobacter sp. AzwK-3b] Length = 599 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 16/220 (7%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + + +S+ E N L ++ E+ + ++ L Sbjct: 381 AALRDQLGQLQALLDDAKTREAAQDVQLQSLGNELNTALARVAAEERRRREAEEARARLL 440 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFDKSSSIPLPETIVVLQK 254 ++ ++ L ++ + + GI I + +F + + K Sbjct: 441 EEQNADLERYRSEFFGRLRDVLGAQEGIRIEGDRFVFSSEVLFAPGEAELSGAGQREVAK 500 Query: 255 IGEVLAHS--------TEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMK-SG 303 + E+ V+ + GHTD P R DNW LS+ RA S + ++ G Sbjct: 501 VAEIFRSVTDEIPEGIDWVLQVDGHTDDVPVRPGAAFEDNWELSMARALSVVRYMIDTLG 560 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + +R+S +GF ++ D + NRRI++ + Sbjct: 561 LPPERLSA-NGFGQYQPVNPDDTPEARAQNRRIELKFTGK 599 >gi|320095395|ref|ZP_08027074.1| outer membrane protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319977666|gb|EFW09330.1| outer membrane protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 402 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 14/116 (12%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290 ++ +FD S + L K+ VLA + GHTD+ + N LS Sbjct: 289 QDGVLFDFGESAVRADAADTLAKLASVLADAKVPAAHVYGHTDSI---SDEAFNQTLSEQ 345 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILV 338 RA + L K+G + GF + + ANRR++I + Sbjct: 346 RAKAVVDELKKNGATAS--LDWQGFGETKPVAPNTNDDGTDNPAGRQANRRVEIFI 399 >gi|51598540|ref|YP_072728.1| flagellar motor protein MotB [Borrelia garinii PBi] gi|51573111|gb|AAU07136.1| flagellar motor rotation protein B [Borrelia garinii PBi] Length = 260 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 16/162 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248 Q + ++ + K ++ GI+IS+ FD +S+ ++ Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIMVRQEERGIVISLAAD---AFFDSASADVKLEDNRDS 147 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302 I + VL+ I GHTD + + NW LS R+ + L +S Sbjct: 148 IQKIASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQS 207 Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 V+ + ++SGF R D NRRIDIL+ Sbjct: 208 NVNSIENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249 Score = 52.7 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 17/39 (43%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57 + + + Y D +T+L+ FF+ M+ +N Sbjct: 4 RVKKPSKCDEGTPDYMLTYGDMVTLLLVFFVTMFSLNDI 42 >gi|212712403|ref|ZP_03320531.1| hypothetical protein PROVALCAL_03491 [Providencia alcalifaciens DSM 30120] gi|212685149|gb|EEB44677.1| hypothetical protein PROVALCAL_03491 [Providencia alcalifaciens DSM 30120] Length = 582 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285 ++ + +FD VL + I + G+TD + N Sbjct: 442 QMVTLDSLSLFDVGQYTLKTGATKVLVDALLNIKAKPGWLIMVSGYTDNT---GNPELNQ 498 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 LSL RA S ++++ + G+ + + + NRR++I + Sbjct: 499 TLSLKRAESVRDWMIQTSDISPICFAVQGYGQNNPVADNRTADGRTRNRRVEIRL 553 >gi|307627623|gb|ADN71927.1| outer membrane protein A [Escherichia coli UM146] Length = 365 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 237 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 293 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 294 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 352 Query: 338 VED 340 V+ Sbjct: 353 VKG 355 >gi|298524392|ref|ZP_07011801.1| outer membrane protein [Mycobacterium tuberculosis 94_M4241A] gi|298494186|gb|EFI29480.1| outer membrane protein [Mycobacterium tuberculosis 94_M4241A] Length = 181 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F + +P +L ++ + L + ++I G+TD + N LS R Sbjct: 76 GPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNT---GSEGINIPLSAQR 132 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A L+ GV+ D I+ + G ++ + NRR++I+V Sbjct: 133 AKIVADYLVARGVAGDHIATV-GLGSVNPIASNATPEGRAKNRRVEIVV 180 >gi|91210052|ref|YP_540038.1| outer membrane protein A [Escherichia coli UTI89] gi|237707059|ref|ZP_04537540.1| outer membrane protein A [Escherichia sp. 3_2_53FAA] gi|91071626|gb|ABE06507.1| outer membrane protein A precursor [Escherichia coli UTI89] gi|226898269|gb|EEH84528.1| outer membrane protein A [Escherichia sp. 3_2_53FAA] Length = 375 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 247 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 303 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 304 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 362 Query: 338 VED 340 V+ Sbjct: 363 VKG 365 >gi|129134|sp|P24016|OMPA_CITFR RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II gi|144442|gb|AAA23095.1| outer membrane protein II [Citrobacter freundii] Length = 238 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 119 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 175 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ D+IS G + +A +RR++I Sbjct: 176 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 234 Query: 338 VED 340 V+ Sbjct: 235 VKG 237 >gi|163787730|ref|ZP_02182177.1| hypothetical protein FBALC1_04287 [Flavobacteriales bacterium ALC-1] gi|159877618|gb|EDP71675.1| hypothetical protein FBALC1_04287 [Flavobacteriales bacterium ALC-1] Length = 366 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 12/121 (9%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIG-EVLAHSTEVISIRGHTDASPFRNIARDNWR 286 + ++ S+ P + V+ + +L I I HTD+ N Sbjct: 249 LNATPIPIYYELGSARLTPASKKVIDERLLTILNDKPVNIEIMSHTDSR---GNDDFNQS 305 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--AS-----DPMNSANRRIDILVE 339 LS RA S L+ G+S R+S G+ RL + + + NRR + V Sbjct: 306 LSQQRANSVVNYLVSKGISRSRLSA-KGYGETRLTNRCTNGADCSETQHQRNRRTEFRVL 364 Query: 340 D 340 Sbjct: 365 S 365 >gi|85705227|ref|ZP_01036326.1| OmpA family protein [Roseovarius sp. 217] gi|85670100|gb|EAQ24962.1| OmpA family protein [Roseovarius sp. 217] Length = 191 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +F SS L++ + + +I GHTD+ N LSL RA S Sbjct: 93 LFATDSSRIGASGQQRLREFFQQANAVS--YTIVGHTDSR---ASDEYNMGLSLRRANSV 147 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + G+ I+ + G+ K +++ + NRR++IL Sbjct: 148 AA--VARGIGAS-IADVRGYGERMPKASNNTAEGMAQNRRVEIL 188 >gi|332559482|ref|ZP_08413804.1| OmpA family outer membrane protein [Rhodobacter sphaeroides WS8N] gi|332277194|gb|EGJ22509.1| OmpA family outer membrane protein [Rhodobacter sphaeroides WS8N] Length = 652 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 39/127 (30%), Gaps = 7/127 (5%) Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFR 278 I + F+ S+ L + EV + I GHTD+ Sbjct: 482 QECMSRIRRVLAGQKITFEPGSAEIDQSARGTLDGLAEVFKVCKAMPLEISGHTDSQ--- 538 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 N LS RA + L V R+ + G+ R + NRRI+ Sbjct: 539 GSEGGNKALSQARAEAVLLALQGRRVDVGRMKAV-GYGEERPIADNGKEEGREANRRIEF 597 Query: 337 LVEDRQG 343 + G Sbjct: 598 TLLGEDG 604 >gi|77464589|ref|YP_354093.1| OmpA family outer membrane protein [Rhodobacter sphaeroides 2.4.1] gi|77389007|gb|ABA80192.1| possible outer membrane protein, OmpA family [Rhodobacter sphaeroides 2.4.1] Length = 652 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 39/127 (30%), Gaps = 7/127 (5%) Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFR 278 I + F+ S+ L + EV + I GHTD+ Sbjct: 482 QECMSRIRRVLAGQKITFEPGSAEIDQSARGTLDGLAEVFKVCKAMPLEISGHTDSQ--- 538 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 N LS RA + L V R+ + G+ R + NRRI+ Sbjct: 539 GSEGGNKALSQARAEAVLLALQGRRVDVGRMKAV-GYGEERPIADNGKEEGREANRRIEF 597 Query: 337 LVEDRQG 343 + G Sbjct: 598 TLLGEDG 604 >gi|324009900|gb|EGB79119.1| outer membrane protein A [Escherichia coli MS 57-2] Length = 354 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 226 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 282 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 283 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 341 Query: 338 VED 340 V+ Sbjct: 342 VKG 344 >gi|37704624|gb|AAR01584.1| OprF [Pseudomonas sp. MFY70] gi|37704664|gb|AAR01604.1| OprF [Pseudomonas sp. MFY162] Length = 298 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD ++ P + ++ + + +A + + GHTD+ N +LS RA + Sbjct: 216 FDFDKAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAV 272 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI 322 QVL+K GV+ R++ + G+ R Sbjct: 273 KQVLVKDGVAPSRVTAV-GYGESRPVA 298 >gi|238797533|ref|ZP_04641031.1| OmpA family protein [Yersinia mollaretii ATCC 43969] gi|238718674|gb|EEQ10492.1| OmpA family protein [Yersinia mollaretii ATCC 43969] Length = 168 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +FD P+ + +Q IG+ L + + GHTD++ N +LS R Sbjct: 61 NKVLFDSDVKKLNPDGVRTVQNIGKALTAVGITHLRVDGHTDST---GEDSYNQQLSYQR 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A + L G+ I + G + + NRR+ ++V Sbjct: 118 AAAVADTLALIGIPRANID-VRGRGKLDPVADNRTAKGRAENRRVSMIVTAP 168 >gi|254227964|ref|ZP_04921394.1| outer membrane protein OmpA [Vibrio sp. Ex25] gi|262396053|ref|YP_003287906.1| outer membrane protein A precursor [Vibrio sp. Ex25] gi|151939460|gb|EDN58288.1| outer membrane protein OmpA [Vibrio sp. Ex25] gi|262339647|gb|ACY53441.1| outer membrane protein A precursor [Vibrio sp. Ex25] Length = 326 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 44/105 (41%), Gaps = 9/105 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ + L +++ + + I G++D + A N +L+ RA + Sbjct: 216 FDLESAEVKDAST--LSGTVDLMNTYPQAQVEITGYSDTT---GSAAYNQQLTEKRAKAV 270 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 G++ +R+ + G +++ NRR++++V Sbjct: 271 ADEFQAKGIAAERM-TVKGMGEANPVASNETRQGRQMNRRVEVVV 314 >gi|329890560|ref|ZP_08268903.1| ompA family protein [Brevundimonas diminuta ATCC 11568] gi|328845861|gb|EGF95425.1| ompA family protein [Brevundimonas diminuta ATCC 11568] Length = 191 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 8/114 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLS 288 ++ F + + PE L ++ + L + I+GHTD++ + N RL Sbjct: 82 SDDSVKFPVNHTELSPEAEQRLAELVQRLRAENANVYLEIQGHTDST---GNDQINERLG 138 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 +RA + + L G++ +R++ IS + + ++ + NRR+ I+V Sbjct: 139 QERAEAVRRFLSDQGIALNRMATIS-YGASKPVAPNNTREGRAQNRRVAIMVLA 191 >gi|197335718|ref|YP_002155279.1| outer membrane protein [Vibrio fischeri MJ11] gi|197317208|gb|ACH66655.1| outer membrane protein [Vibrio fischeri MJ11] Length = 219 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 6/105 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F+ + +LQ + E L + + + GHTD + N L L R+ Sbjct: 111 RVLFNFDQYSLTERSKYILQNVTEKLETQKDTVLLNGHTDN---KGRDNYNINLGLARSN 167 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 S L+ G S++++ S F + + + NRR+DI Sbjct: 168 SVKAFLLDQGASKEQLESYS-FGEQQPIDDNTTLEGQHHNRRVDI 211 >gi|170681860|ref|YP_001744213.1| outer membrane protein A [Escherichia coli SMS-3-5] gi|170519578|gb|ACB17756.1| outer membrane protein A [Escherichia coli SMS-3-5] Length = 358 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|83592431|ref|YP_426183.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170] gi|83575345|gb|ABC21896.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170] Length = 161 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 9/105 (8%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + F P+ LQ+ + L ++ GH D N L R Sbjct: 56 DRVFFGYDQYNLAPDARATLQRQAQWLNQYGNFSLTVEGHADER---GTREYNLALGERR 112 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRR 333 A S + L+ GVS +R+ ++ + R + + NRR Sbjct: 113 ANSVREFLISQGVSANRL-RVVSYGKERPVCT-ETAESCYARNRR 155 >gi|332160220|ref|YP_004296797.1| putative lipoprotein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607214|emb|CBY28712.1| integral membrane protein YfiB [Yersinia enterocolitica subsp. palearctica Y11] gi|325664450|gb|ADZ41094.1| putative lipoprotein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 169 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +FD + +Q IG L + + + G+TDA N +LS R Sbjct: 62 NKVLFDSDVRKLNASGVQTVQNIGRALHNVGINHMRVDGYTDAI---GEDGYNQQLSFQR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A + L G+ I ++ G + + NRR+ I+V Sbjct: 119 ASAVADTLAAIGIPRANI-EVRGRGKLEPVADNRTAKGRAENRRVAIIVTAP 169 >gi|226952046|ref|ZP_03822510.1| OmpA/MotB domain protein [Acinetobacter sp. ATCC 27244] gi|226837203|gb|EEH69586.1| OmpA/MotB domain protein [Acinetobacter sp. ATCC 27244] Length = 255 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+I +L ++ L + I GHTD+ A N LS +RA + Sbjct: 154 FESGSAILTEAGKRILDEMAVALNKVGGKQVKIIGHTDS---SGDASRNVILSKERAVAV 210 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ ++ DR+S G + + NRRI+ V Sbjct: 211 QDYLVSKNIATDRLST-EGKGSSEPIADNATADGRRKNRRIEFEVL 255 >gi|126463429|ref|YP_001044543.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126105093|gb|ABN77771.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 652 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 39/127 (30%), Gaps = 7/127 (5%) Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFR 278 I + F+ S+ L + EV + I GHTD+ Sbjct: 482 QECMSRIRRVLAGQKITFEPGSAEIDQSARGTLDGLAEVFKVCKAMPLEISGHTDSQ--- 538 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 N LS RA + L V R+ + G+ R + NRRI+ Sbjct: 539 GSEGGNKALSQARAEAVLLALQGRRVDVGRMKAV-GYGEERPIADNGKEEGREANRRIEF 597 Query: 337 LVEDRQG 343 + G Sbjct: 598 TLLGEDG 604 >gi|326563201|gb|EGE13469.1| OmpA family protein [Moraxella catarrhalis 12P80B1] Length = 551 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 8/154 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + D+ ++ ++ + G E ILI+ + F S+ E Sbjct: 380 EAEPELDINTAVADSIETARVAIVALGDTVEENEMDILINAL-NTQIINFALDSTEIPQE 438 Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 +L E L E I GHTD N LS RA + + L+ GV+ Sbjct: 439 NKEILDLAAEKLKAVPETTLRIIGHTDTQ---GTHEYNQDLSESRAAAVKEYLLSKGVAA 495 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +R++ G + ++ NRRI+ ++ Sbjct: 496 ERLNT-QGASFDYPVASNATEQGRFQNRRIEFVL 528 >gi|313674495|ref|YP_004052491.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312941193|gb|ADR20383.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 672 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 N F + S L + L ++ +L S + I GHT+ R N LS DR Sbjct: 565 NNVYFAQGSYEILEASHPELDRLIRLLRSSETMQIEIGGHTERR---GSPRLNRILSQDR 621 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 A + ++++G+ + RI G+ + NRR++ + Sbjct: 622 ADAVKAYIVQAGIDQKRIKT-KGYGSSKPVTDGRTEIERRQNRRVEYTILS 671 >gi|259419273|ref|ZP_05743190.1| OmpA/MotB [Silicibacter sp. TrichCH4B] gi|259345495|gb|EEW57349.1| OmpA/MotB [Silicibacter sp. TrichCH4B] Length = 1617 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 10/106 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + + VL++ + L V I GHTD + N LS RA Sbjct: 465 FATGKADIREAGLGVLKQAADALKALGAENYVFLIEGHTD---ITGSDKVNLPLSDARAK 521 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 S Q ++ +G++ +R+ + G+ + NRR++I Sbjct: 522 SVEQYFVESAGIAPERLQTV-GYGSRIPLATNATDRGKQTNRRVEI 566 >gi|59713685|ref|YP_206460.1| outer membrane protein [Vibrio fischeri ES114] gi|59481933|gb|AAW87572.1| outer membrane protein [Vibrio fischeri ES114] Length = 208 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 63/186 (33%), Gaps = 13/186 (6%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 K E + + ++ + + L I Sbjct: 30 TKEDAPFPDFENPETAPVEEMETSEMTRALTGPNGELKDDDMRQVAQQLTNMGIQYH--- 86 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASP 276 + ++ISI ++ + F + + P +L K+ V+A E+ + GHTD Sbjct: 87 KVGNDQLVISIQEKVH---FSSAKAELTPLARSLLNKLIVVMASKPELALVLDGHTD--- 140 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 N LS R+ + L+ + ++ ++ GF + +D + NRR+ Sbjct: 141 VTGDPIKNQNLSEQRSNEVRRYLLANKLNASQLYS-RGFGEYLPLCDNDTILGRKCNRRV 199 Query: 335 DILVED 340 +I + Sbjct: 200 EITILK 205 >gi|298206796|ref|YP_003714975.1| OmpA family protein [Croceibacter atlanticus HTCC2559] gi|83849428|gb|EAP87296.1| OmpA family protein [Croceibacter atlanticus HTCC2559] Length = 630 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 15/150 (10%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + ++ + T I + T FD + P+ VL K +++ Sbjct: 488 ENESIDFELERAKDMIVVDETTKQEKIDL----ETIYFDFDKADITPKAAAVLDKAVKLM 543 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I+I HTD+ + N+ LS RA + Q + G++E+RI G+ Sbjct: 544 NFYPDMVINIESHTDSR---GSKKYNYSLSDRRAKATQQYIYSQGIAEERIVSAQGYGEQ 600 Query: 319 RLKIA-------SDPMNSANRRIDILVEDR 341 RL SD + NRR D ++ R Sbjct: 601 RLLNECKDGVKCSDEEHDVNRRSDFIILKR 630 >gi|326795240|ref|YP_004313060.1| peptidoglycan-associated lipoprotein [Marinomonas mediterranea MMB-1] gi|326546004|gb|ADZ91224.1| peptidoglycan-associated lipoprotein [Marinomonas mediterranea MMB-1] Length = 200 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 59/180 (32%), Gaps = 11/180 (6%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 +T+ + S E+ + A + Q +++ +V D+ + Sbjct: 26 ATETDSSSTVAEDSASATEEQSADAAGQEAGSDQSFGAGEDGSITSVVVDDSGSASAVDQ 85 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFR 278 + + FD SI PE L K E L + + + GH D Sbjct: 86 D----VDLLAGVETVFYFDFDKSIVRPEAREALAKHAEFLVANPDARVVLEGHADER--- 138 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 N L RA + + L GV+ +I +S F D NRR+++ Sbjct: 139 GTREYNMALGERRAKAVARYLTIQGVAASQIESVS-FGEEVPVAFGHDDASWQLNRRVEV 197 >gi|327405866|ref|YP_004346704.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327321374|gb|AEA45866.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 687 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 17/123 (13%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 IS I+ FD +I PE+ + L K+ ++L + + I GHTD A N Sbjct: 564 ISNINPLKNVFFDLDKAILRPESFLELNKLRDLLKANPTMKIEIGGHTDTR---GDAAKN 620 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD------------PMNSANR 332 +LS RA S + L+ G+ R+S GF + I D + NR Sbjct: 621 MQLSDARAKSVKEYLIAQGIEASRLSS-KGFGATKPIITDDVINKMATEKEKEKAHQENR 679 Query: 333 RID 335 R + Sbjct: 680 RTE 682 >gi|162147969|ref|YP_001602430.1| outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|209542586|ref|YP_002274815.1| OmpA/MotB domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|172046688|sp|P84838|OMPC_GLUDA RecName: Full=Outer membrane protein; AltName: Full=OMPC; Flags: Precursor gi|161786546|emb|CAP56128.1| Outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|209530263|gb|ACI50200.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 378 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290 FD S ++ + + H I + G+TD S P + N LS+ Sbjct: 269 VFFDWDRSDLTARAREIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNMGLSIR 328 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA S L++ GV I I G+ + + + NRR++I++ Sbjct: 329 RAQSVKAELIRDGVPTGAID-IHGYGEQHPLVPTGPNTREPQNRRVEIIL 377 >gi|39997403|ref|NP_953354.1| peptidoglycan-associated lipoprotein [Geobacter sulfurreducens PCA] gi|39984294|gb|AAR35681.1| peptidoglycan-associated lipoprotein [Geobacter sulfurreducens PCA] Length = 187 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 7/106 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 FD + + E +L E L + V I GHTD N L RA Sbjct: 83 VYFDFDAWVLNGEAREILAGNAEWLRKNPGVAVILEGHTDER---GSDAYNLALGEQRAK 139 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 SA + L G+ R++ +S + + + + + NRR++ + Sbjct: 140 SAMKYLQTLGIDAGRMTVVS-YGEEKPAVEGHDESAWAGNRRVEFI 184 >gi|315287600|gb|EFU47006.1| outer membrane protein A [Escherichia coli MS 110-3] Length = 354 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 226 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 282 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 283 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 341 Query: 338 VED 340 V+ Sbjct: 342 VKG 344 >gi|254475411|ref|ZP_05088797.1| OmpA/MotB [Ruegeria sp. R11] gi|214029654|gb|EEB70489.1| OmpA/MotB [Ruegeria sp. R11] Length = 627 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 39/108 (36%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ + L +I ++LA V I+GHTD+ N LS RA S Sbjct: 499 FEPGSATVAAGSRDTLDQIADILARCDGVRLEIQGHTDSQ---GREEMNQNLSQARAQSV 555 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 L + S G+ +D NRRI+ + Sbjct: 556 LNELRDRRIVTSSFSA-KGYGESTPIATNDTEEGREANRRIEFRLIRP 602 >gi|119896572|ref|YP_931785.1| hypothetical protein azo0281 [Azoarcus sp. BH72] gi|119668985|emb|CAL92898.1| conserved hypothetical outer membrane protein [Azoarcus sp. BH72] Length = 214 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 24/176 (13%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + L E ++R + L K ++ L+ + Sbjct: 38 GVQMELASSLEAEVQKRRVEEQRREALEKALAVPLASGRVTLANGRIGI----------- 86 Query: 229 IDQRNTPMFDKSSSIPLPETIVVL----QKIGEVLAHSTEVISIRGHTDASPFRNI---A 281 + +F +S P+ +L + LA E++ + G TD P R+ Sbjct: 87 ---SGSVLFALNSDELQPDGRQLLKSLAPPLAAYLASHDEMLMVSGFTDDRPVRDSNRQF 143 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 DNW LS RA + +VL++ GV + + F + ++ + NRR++ Sbjct: 144 ADNWELSAQRALTVTRVLVEEGVPSAAVFAAA-FGQEQPVASNADADGRARNRRVE 198 >gi|87121845|ref|ZP_01077731.1| flagellar motor aparatus [Marinomonas sp. MED121] gi|86162874|gb|EAQ64153.1| flagellar motor aparatus [Marinomonas sp. MED121] Length = 258 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 70/195 (35%), Gaps = 6/195 (3%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + + S+ S D + + +++ +P + Sbjct: 48 LSSIQIAMSSKGANVSQQPDKYSDGGEKVIMPERQEVGIDKDLLVPTTDTASAAEALEAE 107 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +L+++ + + V ++I++ +F+ S ++ Sbjct: 108 KLEEIKAMAEVVSEQIEITQLSNVVTVLQNGDQLIITV---DGQTLFESGESELSWQSDY 164 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + +++ ++ E I+I+GHTD P R NW LS RA + + ++ G+ R Sbjct: 165 IFEELIKMFKFYFEFSINIKGHTDNIPIRTVKFPSNWELSAIRATTVLRYFLEEGIGAQR 224 Query: 309 ISKISGFAHHRLKIA 323 ++ +G+A Sbjct: 225 MTA-TGYADSVPIAP 238 >gi|326773949|ref|ZP_08233231.1| hypothetical protein HMPREF0059_02355 [Actinomyces viscosus C505] gi|326636088|gb|EGE36992.1| hypothetical protein HMPREF0059_02355 [Actinomyces viscosus C505] Length = 505 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 7/111 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S+ P L+ + LA ++I GHTD N LS RA + Sbjct: 216 FASDSADLAPGAEAQLKTVAGQLAQYPDGGTLTIVGHTDDVQ---DDAYNQTLSEKRANA 272 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 L + + + +SG K+ SD + NRR++I + G Sbjct: 273 VKTRLAQLTTLDKWQTSVSGKGESEPKVKDTSDEARAVNRRVEITLTPTGG 323 >gi|218700524|ref|YP_002408153.1| outer membrane protein A [Escherichia coli IAI39] gi|331646217|ref|ZP_08347320.1| outer membrane protein A [Escherichia coli M605] gi|218370510|emb|CAR18317.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI39] gi|331044969|gb|EGI17096.1| outer membrane protein A [Escherichia coli M605] Length = 374 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 246 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 302 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 303 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 361 Query: 338 VED 340 V+ Sbjct: 362 VKG 364 >gi|197336770|ref|YP_002158098.1| outer membrane protein [Vibrio fischeri MJ11] gi|197314022|gb|ACH63471.1| outer membrane protein [Vibrio fischeri MJ11] Length = 208 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 63/186 (33%), Gaps = 13/186 (6%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 K E + + ++ + + L I Sbjct: 30 TKEDAPFPDFENPETAPVEEMETSEMTRALTGPNGELKDDDMRQVAQQLTNMGIQYH--- 86 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASP 276 + ++ISI ++ + F + + P +L K+ V++ E+ + GHTD Sbjct: 87 KVGNDQLVISIQEKVH---FSSAKAELTPLARSLLNKLIVVMSSKPELALVLDGHTD--- 140 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 N LS R+ + L+ + ++ ++ GF + +D + NRR+ Sbjct: 141 VTGDPIKNQNLSEQRSNEVRRYLLANKLNASQLYS-RGFGEYLPLCDNDTILGRKCNRRV 199 Query: 335 DILVED 340 +I + Sbjct: 200 EITILK 205 >gi|89890645|ref|ZP_01202155.1| outer membrane protein [Flavobacteria bacterium BBFL7] gi|89517560|gb|EAS20217.1| outer membrane protein [Flavobacteria bacterium BBFL7] Length = 659 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 68/191 (35%), Gaps = 17/191 (8%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 + + +NY + +E +A + + + A + D+ V + Sbjct: 476 GEDAAYSFVLECGQNYSIRAQKEEFTIAEEFVQTPKTSATLLQPLAVAKSIDDKVADIKV 535 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 IL N FD + + LQK+ + +I IR HTD+ Sbjct: 536 GDDLNDIL-----DLNMIYFDFDKHNIRYDAEIELQKVLAFMEAYPNSIIDIRSHTDSRA 590 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNS 329 N +LS RA S L+ G+ +R++ G+ ++L ++ + Sbjct: 591 SDG---YNIKLSDRRAKSTRAYLIMKGIKANRLTA-RGYGEYQLVNECSNGVECTEEQHQ 646 Query: 330 ANRRIDILVED 340 NRR + ++ Sbjct: 647 LNRRSEFIIMK 657 >gi|26246978|ref|NP_753018.1| outer membrane protein A [Escherichia coli CFT073] gi|26107378|gb|AAN79561.1|AE016758_165 Outer membrane protein A precursor [Escherichia coli CFT073] Length = 379 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 251 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 307 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 308 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 366 Query: 338 VED 340 V+ Sbjct: 367 VKG 369 >gi|332093647|gb|EGI98705.1| outer membrane protein A [Shigella boydii 3594-74] Length = 346 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|323967204|gb|EGB62628.1| OmpA transmembrane domain-containing protein [Escherichia coli M863] gi|323976664|gb|EGB71752.1| OmpA transmembrane domain-containing protein [Escherichia coli TW10509] gi|327253749|gb|EGE65378.1| outer membrane protein A [Escherichia coli STEC_7v] Length = 350 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 222 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|323462898|pdb|3NB3|A Chain A, The Host Outer Membrane Proteins Ompa And Ompc Are Packed At Specific Sites In The Shigella Phage Sf6 Virion As Structural Components gi|323462899|pdb|3NB3|B Chain B, The Host Outer Membrane Proteins Ompa And Ompc Are Packed At Specific Sites In The Shigella Phage Sf6 Virion As Structural Components gi|323462900|pdb|3NB3|C Chain C, The Host Outer Membrane Proteins Ompa And Ompc Are Packed At Specific Sites In The Shigella Phage Sf6 Virion As Structural Components Length = 346 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|320192555|gb|EFW67196.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str. EC1212] gi|320202354|gb|EFW76925.1| Outer membrane protein A precursor [Escherichia coli EC4100B] gi|323165436|gb|EFZ51223.1| outer membrane protein A [Shigella sonnei 53G] Length = 337 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 209 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 265 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 266 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 324 Query: 338 VED 340 V+ Sbjct: 325 VKG 327 >gi|315619153|gb|EFU99733.1| outer membrane protein A [Escherichia coli 3431] Length = 346 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|309701236|emb|CBJ00536.1| outer membrane protein A [Escherichia coli ETEC H10407] Length = 346 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|293414237|ref|ZP_06656886.1| OOP family OmpA-OmpF porin [Escherichia coli B185] gi|291434295|gb|EFF07268.1| OOP family OmpA-OmpF porin [Escherichia coli B185] Length = 350 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 222 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|110804972|ref|YP_688492.1| outer membrane protein A [Shigella flexneri 5 str. 8401] gi|110614520|gb|ABF03187.1| outer membrane protein 3a [Shigella flexneri 5 str. 8401] Length = 348 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 220 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 276 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 277 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKRRAALIDCLAPDRRVEIE 335 Query: 338 VED 340 V+ Sbjct: 336 VKG 338 >gi|38000008|gb|AAP74760.2| outer membrane protein A precursor [Shigella flexneri 2a] Length = 327 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 199 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 255 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 256 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 314 Query: 338 VED 340 V+ Sbjct: 315 VKG 317 >gi|146983|gb|AAA24232.1| outer membrane protein II [Escherichia fergusonii] Length = 243 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 124 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 180 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 181 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 239 Query: 338 VED 340 V+ Sbjct: 240 VKG 242 >gi|82776247|ref|YP_402596.1| outer membrane protein A [Shigella dysenteriae Sd197] gi|81240395|gb|ABB61105.1| outer membrane protein 3a [Shigella dysenteriae Sd197] Length = 350 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 222 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|51235578|gb|AAT98590.1| outer membrane protein A [Escherichia coli] Length = 346 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|30062494|ref|NP_836665.1| outer membrane protein A [Shigella flexneri 2a str. 2457T] gi|56479781|ref|NP_706879.2| outer membrane protein A [Shigella flexneri 2a str. 301] gi|82544719|ref|YP_408666.1| outer membrane protein A [Shigella boydii Sb227] gi|30040740|gb|AAP16471.1| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str. 2457T] gi|56383332|gb|AAN42586.2| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str. 301] gi|81246130|gb|ABB66838.1| outer membrane protein 3a [Shigella boydii Sb227] gi|313650796|gb|EFS15197.1| outer membrane protein A [Shigella flexneri 2a str. 2457T] gi|332759051|gb|EGJ89361.1| outer membrane protein A [Shigella flexneri 4343-70] gi|332759932|gb|EGJ90233.1| outer membrane protein A [Shigella flexneri 2747-71] gi|332762738|gb|EGJ93001.1| outer membrane protein A [Shigella flexneri K-671] gi|332767750|gb|EGJ97941.1| outer membrane protein 3a [Shigella flexneri 2930-71] gi|333001202|gb|EGK20770.1| outer membrane protein A [Shigella flexneri VA-6] gi|333006193|gb|EGK25702.1| outer membrane protein A [Shigella flexneri K-218] gi|333008941|gb|EGK28401.1| outer membrane protein A [Shigella flexneri K-272] gi|333020097|gb|EGK39368.1| outer membrane protein A [Shigella flexneri K-304] gi|333020253|gb|EGK39523.1| outer membrane protein A [Shigella flexneri K-227] Length = 348 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 220 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 276 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 277 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 335 Query: 338 VED 340 V+ Sbjct: 336 VKG 338 >gi|309786688|ref|ZP_07681308.1| outer membrane protein A [Shigella dysenteriae 1617] gi|129143|sp|P02935|OMPA_SHIDY RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II; Flags: Precursor gi|46945|emb|CAA24638.1| unnamed protein product [Shigella dysenteriae] gi|308925381|gb|EFP70868.1| outer membrane protein A [Shigella dysenteriae 1617] Length = 351 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 223 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 279 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 280 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 338 Query: 338 VED 340 V+ Sbjct: 339 VKG 341 >gi|229485743|sp|P0C8Z2|OMPA_ESCFE RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II gi|146991|gb|AAA24236.1| outer membrane protein II [Escherichia fergusonii] gi|146999|gb|AAA24240.1| outer membrane protein II [Escherichia fergusonii] Length = 243 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 124 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 180 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 181 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 239 Query: 338 VED 340 V+ Sbjct: 240 VKG 242 >gi|157159269|ref|YP_001462189.1| outer membrane protein A [Escherichia coli E24377A] gi|331667340|ref|ZP_08368205.1| outer membrane protein A [Escherichia coli TA271] gi|51235576|gb|AAT98589.1| outer membrane protein A [Escherichia coli] gi|157081299|gb|ABV21007.1| outer membrane protein A [Escherichia coli E24377A] gi|331065696|gb|EGI37589.1| outer membrane protein A [Escherichia coli TA271] Length = 350 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 222 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|15800816|ref|NP_286832.1| outer membrane protein A [Escherichia coli O157:H7 EDL933] gi|15830295|ref|NP_309068.1| outer membrane protein A [Escherichia coli O157:H7 str. Sakai] gi|16128924|ref|NP_415477.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12 substr. MG1655] gi|74311514|ref|YP_309933.1| outer membrane protein A [Shigella sonnei Ss046] gi|89107807|ref|AP_001587.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12 substr. W3110] gi|157160478|ref|YP_001457796.1| outer membrane protein A [Escherichia coli HS] gi|170080615|ref|YP_001729935.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12 substr. DH10B] gi|187730326|ref|YP_001880845.1| outer membrane protein A [Shigella boydii CDC 3083-94] gi|188493530|ref|ZP_03000800.1| outer membrane protein P5 [Escherichia coli 53638] gi|209918209|ref|YP_002292293.1| outer membrane protein A [Escherichia coli SE11] gi|218694432|ref|YP_002402099.1| outer membrane protein A [Escherichia coli 55989] gi|238900215|ref|YP_002926011.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952] gi|253774014|ref|YP_003036845.1| outer membrane protein A [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161071|ref|YP_003044179.1| outer membrane protein A [Escherichia coli B str. REL606] gi|254792157|ref|YP_003076994.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14359] gi|260843206|ref|YP_003220984.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009] gi|260854249|ref|YP_003228140.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368] gi|260867129|ref|YP_003233531.1| outer membrane protein A [Escherichia coli O111:H- str. 11128] gi|261227460|ref|ZP_05941741.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK2000] gi|261256117|ref|ZP_05948650.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK966] gi|307311656|ref|ZP_07591296.1| OmpA domain protein transmembrane region-containing protein [Escherichia coli W] gi|312971089|ref|ZP_07785268.1| outer membrane protein A [Escherichia coli 1827-70] gi|71159604|sp|P0A911|OMPA_ECO57 RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II*; Flags: Precursor gi|71159605|sp|P0A910|OMPA_ECOLI RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II*; Flags: Precursor gi|12514142|gb|AAG55443.1|AE005286_2 outer membrane protein 3a (II*;G;d) [Escherichia coli O157:H7 str. EDL933] gi|42161|emb|CAA23588.1| ompA protein [Escherichia coli] gi|1651465|dbj|BAA35715.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K12 substr. W3110] gi|1787191|gb|AAC74043.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12 substr. MG1655] gi|13360501|dbj|BAB34464.1| outer membrane protein 3a [Escherichia coli O157:H7 str. Sakai] gi|32329155|gb|AAP74759.1| outer membrane protein A precursor [Shigella sonnei] gi|73854991|gb|AAZ87698.1| outer membrane protein 3a (II*;G;d) [Shigella sonnei Ss046] gi|157066158|gb|ABV05413.1| outer membrane protein A [Escherichia coli HS] gi|169888450|gb|ACB02157.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12 substr. DH10B] gi|187427318|gb|ACD06592.1| outer membrane protein A [Shigella boydii CDC 3083-94] gi|188488729|gb|EDU63832.1| outer membrane protein P5 [Escherichia coli 53638] gi|209774438|gb|ACI85531.1| outer membrane protein 3a [Escherichia coli] gi|209774440|gb|ACI85532.1| outer membrane protein 3a [Escherichia coli] gi|209774442|gb|ACI85533.1| outer membrane protein 3a [Escherichia coli] gi|209774444|gb|ACI85534.1| outer membrane protein 3a [Escherichia coli] gi|209774446|gb|ACI85535.1| outer membrane protein 3a [Escherichia coli] gi|209911468|dbj|BAG76542.1| outer membrane protein OmpA [Escherichia coli SE11] gi|218351164|emb|CAU96868.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli 55989] gi|238861958|gb|ACR63956.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952] gi|242376772|emb|CAQ31485.1| outer membrane protein 3a (II*;G;d) [Escherichia coli BL21(DE3)] gi|253325058|gb|ACT29660.1| OmpA domain protein transmembrane region-containing protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972972|gb|ACT38643.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli B str. REL606] gi|253977186|gb|ACT42856.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BL21(DE3)] gi|254591557|gb|ACT70918.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli O157:H7 str. TW14359] gi|257752898|dbj|BAI24400.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368] gi|257758353|dbj|BAI29850.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009] gi|257763485|dbj|BAI34980.1| outer membrane protein A [Escherichia coli O111:H- str. 11128] gi|260449897|gb|ACX40319.1| OmpA domain protein transmembrane region-containing protein [Escherichia coli DH1] gi|306908211|gb|EFN38710.1| OmpA domain protein transmembrane region-containing protein [Escherichia coli W] gi|310336850|gb|EFQ02017.1| outer membrane protein A [Escherichia coli 1827-70] gi|315060242|gb|ADT74569.1| outer membrane protein A [Escherichia coli W] gi|315135605|dbj|BAJ42764.1| OmpA domain protein transmembrane region-containing protein precursor [Escherichia coli DH1] gi|320648407|gb|EFX17062.1| outer membrane protein A [Escherichia coli O157:H- str. H 2687] gi|320659566|gb|EFX27129.1| outer membrane protein A [Escherichia coli O55:H7 str. USDA 5905] gi|320664337|gb|EFX31488.1| outer membrane protein A [Escherichia coli O157:H7 str. LSU-61] gi|323157149|gb|EFZ43272.1| outer membrane protein A [Escherichia coli EPECa14] gi|323159587|gb|EFZ45567.1| outer membrane protein A [Escherichia coli E128010] gi|323174936|gb|EFZ60551.1| outer membrane protein A [Escherichia coli LT-68] gi|323175416|gb|EFZ61011.1| outer membrane protein A [Escherichia coli 1180] gi|323185333|gb|EFZ70697.1| outer membrane protein A [Escherichia coli 1357] gi|323379198|gb|ADX51466.1| OmpA/MotB domain protein [Escherichia coli KO11] gi|323938062|gb|EGB34324.1| OmpA transmembrane domain-containing protein [Escherichia coli E1520] gi|323942872|gb|EGB39037.1| OmpA transmembrane domain-containing protein [Escherichia coli E482] gi|323947254|gb|EGB43262.1| OmpA transmembrane domain-containing protein [Escherichia coli H120] gi|323962843|gb|EGB58418.1| OmpA transmembrane domain-containing protein [Escherichia coli H489] gi|323973167|gb|EGB68359.1| OmpA transmembrane domain-containing protein [Escherichia coli TA007] gi|324117179|gb|EGC11087.1| OmpA transmembrane domain-containing protein [Escherichia coli E1167] Length = 346 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|326773950|ref|ZP_08233232.1| hypothetical protein HMPREF0059_02356 [Actinomyces viscosus C505] gi|326636089|gb|EGE36993.1| hypothetical protein HMPREF0059_02356 [Actinomyces viscosus C505] Length = 569 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 59/208 (28%), Gaps = 10/208 (4%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 L+ + + D++ + + I K+ Sbjct: 175 ELAPGEDMTSYLSFGKVDTDTVTVMVPMVGFTTVSVLDAGSAKKAKIDLSIAQAALKQSS 234 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D+ + + + I +++ F S+ P L Sbjct: 235 HDVPELADPVAIERYTRALDDSTSTQAGGKDITVTLASDVT---FASDSADLAPGAEAQL 291 Query: 253 QKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + L ++I GHTD N LS RA + L + + + Sbjct: 292 NTVASQLGQYPDGGTLTIVGHTDDVQ---DDAYNQTLSEKRANAVKTRLAQLTKLDKWQT 348 Query: 311 KISGFAHHRLK--IASDPMNSANRRIDI 336 +SG K +D +ANRR++I Sbjct: 349 SVSGKGESEPKIKDTTDEARAANRRVEI 376 >gi|229837675|ref|ZP_04457837.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A] gi|229704363|gb|EEO91374.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A] Length = 513 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + +L + I + GHTD A+ N LSL Sbjct: 378 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 434 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + L S VS + G+ R +D + NRR++I + Sbjct: 435 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRVLNRRVEISL 484 >gi|149185618|ref|ZP_01863934.1| hypothetical protein ED21_21374 [Erythrobacter sp. SD-21] gi|148830838|gb|EDL49273.1| hypothetical protein ED21_21374 [Erythrobacter sp. SD-21] Length = 162 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 35/102 (34%), Gaps = 7/102 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD E LQ + + +I GH D N L RA Sbjct: 58 VYFDTDRYNIDAEDSAKLQTQAQYFSQYPNVNFTIEGHADER---GTREYNLALGERRAN 114 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 +A L+ G+ RI IS + R +++ + NRR Sbjct: 115 AAKNYLVSLGIPASRIRTIS-YGKERPVALGSNEAAWAQNRR 155 >gi|254420406|ref|ZP_05034130.1| OmpA family protein [Brevundimonas sp. BAL3] gi|196186583|gb|EDX81559.1| OmpA family protein [Brevundimonas sp. BAL3] Length = 183 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 8/118 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDN 284 ++ ++ F +S PE L + + L + + I+G+TDA+ N Sbjct: 70 QVVLSDDSVKFPTDASALSPEAEQRLAQFAQRLRDENKNVYLEIQGYTDAT---GPVEHN 126 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 +L RA + + L + GV+ +R+S IS + ++D NRR+ I+V Sbjct: 127 NQLGEQRAEAVRRFLNRQGVALNRMSTIS-YGPEEPVASNDTPEGRSQNRRVTIVVLA 183 >gi|163783062|ref|ZP_02178057.1| hypothetical protein HG1285_00765 [Hydrogenivirga sp. 128-5-R1-1] gi|159881742|gb|EDP75251.1| hypothetical protein HG1285_00765 [Hydrogenivirga sp. 128-5-R1-1] Length = 351 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD E + +L ++ + L + + I G TD N +L++ RA + Sbjct: 245 FDFDKYSIRREYVPILNEVVKTLKENEFVKVRIEGFTD---IIGPKEYNEKLAMKRAEAV 301 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + L++ G+ ED+I I GF R +++ NRR++ +V Sbjct: 302 KRYLVEKGIPEDKID-IVGFGKERFIASNEDKIGRLTNRRVEFIV 345 >gi|85703482|ref|ZP_01034586.1| OmpA domain protein [Roseovarius sp. 217] gi|85672410|gb|EAQ27267.1| OmpA domain protein [Roseovarius sp. 217] Length = 635 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 86/301 (28%), Gaps = 11/301 (3%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN--KIDLSIDEHI 106 + + T + ++ + + + E + + + Sbjct: 307 VALLAPEGTPQSDFDDVAGKLEADLPDVFALTATLPPPPDTAEPVAPEFVATLSPEGQVL 366 Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 + V + + + ++ ++ +E + G ++ Sbjct: 367 IRGRVGSETSRETVRSFAKARFSSNAVHLTARVAEGLPRDWSIRVLTGLEVLSYLSNGVV 426 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV--LFETTRTGI 224 +N + + K + + + L D + + V L Sbjct: 427 TVTPDNLSVQGNTGRKSASAEIAQFLSDKLGGAEKYSIDVTYKKALDPVAGLPTPDECEA 486 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 I+ I F+ S+ + ++ I ++L E + I GHTD+ Sbjct: 487 QIAEIQSTRKINFEPGSATIDAQGAAIMDDIADILKDCGEIPMVIGGHTDSQ---GREEM 543 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 N +LSL RA + L V I G+ ++ NRRI+ + Sbjct: 544 NEQLSLARARAVLDELRLRRVLTSSIDA-KGYGESTPIADNETEAGRETNRRIEFRLIRP 602 Query: 342 Q 342 + Sbjct: 603 E 603 >gi|119776394|ref|YP_929134.1| OmpA/MotB [Shewanella amazonensis SB2B] gi|119768894|gb|ABM01465.1| OmpA/MotB [Shewanella amazonensis SB2B] Length = 201 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 10/109 (9%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293 +F SS P+ ++++ + +I GH + N LS RA Sbjct: 77 VLFPNDSSYLAPQYFGQIEELASFMRQFPNTKVTIEGHCSRT---GGYDYNMELSQRRAN 133 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI--DIL 337 + +VL + G+ R+ + GF ++ SD + NRR+ +I+ Sbjct: 134 AVTEVLTQQYGIESSRLKAV-GFGYNSPVDPSDTPEAHDKNRRVIAEIV 181 >gi|50085693|ref|YP_047203.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp. ADP1] gi|49531669|emb|CAG69381.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp. ADP1] Length = 193 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS E LQ + L + +++ GHTD N L RA + Sbjct: 85 FDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDER---GTREYNMALGERRAKAV 141 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 L+ +GV+ ++ +S + ++ NRR++I Sbjct: 142 QSYLITNGVNPQQLEAVS-YGKEMPINPGHNEAAWKENRRVEI 183 >gi|326346124|gb|EGD69862.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str. 1044] Length = 273 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 145 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 201 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 202 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 260 Query: 338 VED 340 V+ Sbjct: 261 VKG 263 >gi|325105158|ref|YP_004274812.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] gi|324974006|gb|ADY52990.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] Length = 593 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 12/112 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +D S P+ +L + +L + I + HTD+ N RLS RA SA Sbjct: 482 YDFDKSDIRPDAARILDNLVNILKQNPSLRIELSSHTDSR---GSDAYNLRLSQKRAESA 538 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 + L+ G+ + R+ GF +L +D + NRR ++ V Sbjct: 539 VKYLVDRGIDKSRLVA-RGFGETKLLNKCANEVDCTDAEHEVNRRTEVKVLK 589 >gi|312945470|gb|ADR26297.1| outer membrane protein A [Escherichia coli O83:H1 str. NRG 857C] Length = 365 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 237 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 293 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 294 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 352 Query: 338 VED 340 V+ Sbjct: 353 VKG 355 >gi|289761034|ref|ZP_06520412.1| outer membrane protein A ompA [Mycobacterium tuberculosis GM 1503] gi|289708540|gb|EFD72556.1| outer membrane protein A ompA [Mycobacterium tuberculosis GM 1503] Length = 232 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F + +P +L ++ + L + ++I G+TD + N LS R Sbjct: 127 GPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNT---GSEGINIPLSAQR 183 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A L+ GV+ D I+ + G ++ + NRR++I+V Sbjct: 184 AKIVADYLVARGVAGDHIATV-GLGSVNPIASNATPEGRAKNRRVEIVV 231 >gi|78189866|ref|YP_380204.1| OmpA domain-containing protein [Chlorobium chlorochromatii CaD3] gi|78172065|gb|ABB29161.1| OmpA domain protein [Chlorobium chlorochromatii CaD3] Length = 205 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDR 291 F+ S+ + LQ+ +L E I I GH D R + N L R Sbjct: 98 GDIFFEYDSATLDESAQMQLQQNAALLQQFIVESIQIEGHCD---IRGTSEYNLALGERR 154 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A +A + LM+ GV R+ +S F R + + NRR+ ++ Sbjct: 155 ATTAKEYLMRLGVPASRLETVS-FGEERPFDNGNSEDAWAKNRRVHFVL 202 >gi|300819200|ref|ZP_07099401.1| outer membrane protein A [Escherichia coli MS 107-1] gi|300528219|gb|EFK49281.1| outer membrane protein A [Escherichia coli MS 107-1] Length = 353 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 225 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 281 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 282 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 340 Query: 338 VED 340 V+ Sbjct: 341 VKG 343 >gi|221640500|ref|YP_002526762.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131] gi|221161281|gb|ACM02261.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131] Length = 652 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 39/127 (30%), Gaps = 7/127 (5%) Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFR 278 I + F+ S+ L + EV + I GHTD+ Sbjct: 482 QECMSRIRRVLAGQKITFEPGSAEIDRSARGTLDGLAEVFKVCKAMPLEISGHTDSQ--- 538 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 N LS RA + L V R+ + G+ R + NRRI+ Sbjct: 539 GSEGGNKALSQARAEAVLLALQGRRVDVGRMKAV-GYGEERPIADNGNEEGREANRRIEF 597 Query: 337 LVEDRQG 343 + G Sbjct: 598 TLLGEDG 604 >gi|86142769|ref|ZP_01061208.1| OmpA family protein [Leeuwenhoekiella blandensis MED217] gi|85830801|gb|EAQ49259.1| OmpA family protein [Leeuwenhoekiella blandensis MED217] Length = 622 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 11/117 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + FD + P+ L K+ ++ E+ + HTD N +LS Sbjct: 510 KLEKIYFDFDKANIRPDAATTLDKLVALMKKYPEMNVEVASHTDQR---GPEDYNLQLSQ 566 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNS--ANRRIDILVED 340 RA S ++ G+ R+ G+ A NRR + + Sbjct: 567 RRAQSTVDYIVSKGIDRSRLKA-QGYGEQDPINACPSGDCTEEQFDENRRSEFTILK 622 >gi|228469678|ref|ZP_04054646.1| immunogenic 23 kDa lipoprotein PG3 [Porphyromonas uenonis 60-3] gi|228308697|gb|EEK17423.1| immunogenic 23 kDa lipoprotein PG3 [Porphyromonas uenonis 60-3] Length = 225 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 8/142 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + +G E+ G I ++ +F+ SSS + L+K + L + Sbjct: 77 KKELEQQLPEGTQVESVNDGQAIKVVFDSGL-LFNTSSSTLSSSSRNDLRKFADNLNKNH 135 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + I GHTD+ R N LS DRA S L GVS R+ G H Sbjct: 136 DTVLEIIGHTDS---SGNDRINDPLSRDRAKSVRDFLEGQGVSSTRMK-YEGRGSHEPVD 191 Query: 323 ASDPMNS--ANRRIDILVEDRQ 342 + NRR+++ + Q Sbjct: 192 TNATAEGKRKNRRVEVFILPSQ 213 >gi|254457990|ref|ZP_05071417.1| OmpA/MotB [Campylobacterales bacterium GD 1] gi|207085383|gb|EDZ62668.1| OmpA/MotB [Campylobacterales bacterium GD 1] Length = 219 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 11/199 (5%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 + SE L + + + K E I + + + + Sbjct: 1 MDAKKISEAIGSLSGAMSVLEGGTKTEVSKQRMQQSTPIDSNDESSEAVNRVAQAVIDAN 60 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--- 261 ++ + E + G +I + + +F S+ E ++ K ++ Sbjct: 61 EMMEKGHGPAISVEEAQEGFVIEL---PASLLFKSGSATIENEDALLFLKRVALIVEELP 117 Query: 262 STEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 ++ +S++GHTD N +DNW LS RA S Q L+ V RIS SGFA ++ Sbjct: 118 NSMQVSVQGHTDNQGPGNNSVFKDNWELSSARAISVLQELLLDSVDPKRISA-SGFAEYK 176 Query: 320 LKIASDPMNSA--NRRIDI 336 + NRR+++ Sbjct: 177 PLATNVTEAGREKNRRVEL 195 >gi|111223898|ref|YP_714692.1| hypothetical protein FRAAL4505 [Frankia alni ACN14a] gi|111151430|emb|CAJ63147.1| hypothetical protein; putative signal peptide; putative OmpA/MotB domain [Frankia alni ACN14a] Length = 384 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 6/103 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F S + P L + VL + + G+TD + N LSL+RA +A Sbjct: 281 FPVSGARLSPSAQARLDSVAAVLRGGDLAVLVGGYTDT---SGPSALNQALSLNRAQAAA 337 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 L GV D + + +GF + +ANRRI+I+ Sbjct: 338 DYLTSRGVPAD-LVRAAGFGSREPVAGNGTPQGRAANRRIEII 379 >gi|329888176|ref|ZP_08266774.1| ompA family protein [Brevundimonas diminuta ATCC 11568] gi|328846732|gb|EGF96294.1| ompA family protein [Brevundimonas diminuta ATCC 11568] Length = 330 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + L + + + ++L +S+ GHTD + N LS +RA + Sbjct: 228 FALDKADILDASRPQIDAMAQMLKDEAGLRLSVEGHTDNT---GAPARNRPLSEERARAV 284 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 L + G+ R+ GF + + D + NRR++++ Sbjct: 285 VAALTQQGIDAKRLEA-KGFGADKPVADNASDEGRARNRRVELV 327 >gi|170750466|ref|YP_001756726.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170656988|gb|ACB26043.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831] Length = 319 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + LP + + + +L ++I G+TD + A N LS RA + Sbjct: 218 FATDRAEILPASAPQIDAVAALLRTDPGLRLAINGYTDGT---GAAAHNQALSDGRAKAV 274 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L+ +G+++DR+ + GF ++D + NRR++++ Sbjct: 275 VARLVGAGIAKDRL-RAEGFGAASPVASNDSAAGRAQNRRVELV 317 >gi|163738369|ref|ZP_02145784.1| OmpA/MotB [Phaeobacter gallaeciensis BS107] gi|161388290|gb|EDQ12644.1| OmpA/MotB [Phaeobacter gallaeciensis BS107] Length = 211 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ VL K + E + GHTDA A N L L RA +A Sbjct: 68 FAFDSAQLDGNARAVLDKQAHWIRQFPEVRFRVFGHTDAV---GSAGYNKSLGLRRARAA 124 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L+ G+S R+ + F + I + NRR Sbjct: 125 VNYLVSRGISRSRLQAVVSFGETQPLIPTSDRERRNRR 162 >gi|118591925|ref|ZP_01549320.1| possible outer membrane protein OprF [Stappia aggregata IAM 12614] gi|118435568|gb|EAV42214.1| possible outer membrane protein OprF [Stappia aggregata IAM 12614] Length = 194 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ S+ + I+ LQ +G+ L I GHTD R A N LS RA+ Sbjct: 88 FEFDSASLTNDGILTLQALGQALQDPRLKNMRFQIAGHTD---LRGTADYNLDLSKRRAF 144 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + L + ++ + G+ R +P + NRR++I+ Sbjct: 145 MVAEFLAAFYTIPRGQLVPV-GYGESRPVDPGNPSSGRNRRVEII 188 >gi|56413933|ref|YP_151008.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362856|ref|YP_002142493.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128190|gb|AAV77696.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094333|emb|CAR59845.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 350 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 222 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 279 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|16759951|ref|NP_455568.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142277|ref|NP_805619.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|68052784|sp|Q8Z7S0|OMPA_SALTI RecName: Full=Outer membrane protein A; Flags: Precursor gi|25298549|pir||AI0626 outer membrane protein A STY1091 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502245|emb|CAD08196.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi] gi|29137907|gb|AAO69468.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 350 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 222 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 279 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|16764429|ref|NP_460044.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205352225|ref|YP_002226026.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856415|ref|YP_002243066.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|20141670|sp|P02936|OMPA_SALTY RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane major heat-modifiable protein; AltName: Full=Outer membrane protein 33K; Flags: Precursor gi|16419585|gb|AAL20003.1| putative membrane component hydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|146760785|gb|ABQ44512.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium] gi|205272006|emb|CAR36850.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206708218|emb|CAR32518.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246287|emb|CBG24095.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992822|gb|ACY87707.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157614|emb|CBW17106.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|332987964|gb|AEF06947.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 350 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 222 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 279 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|288917360|ref|ZP_06411727.1| OmpA/MotB domain protein [Frankia sp. EUN1f] gi|288351225|gb|EFC85435.1| OmpA/MotB domain protein [Frankia sp. EUN1f] Length = 409 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 94/290 (32%), Gaps = 12/290 (4%) Query: 50 VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 + + D T+ + ++A+ + + P S + ++ Sbjct: 126 LAFSATVPDSATRAQLLGAAADVSGGSVSATVTVDPKVATPALESFGDVARALGRQPGVR 185 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 SV + S + + + + + + Sbjct: 186 SVTIDGSSLVLQGTVADRAAGTVIGAEVLAAVRHRVPDASLDNRLTVGAEV------DLD 239 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + P++ + A +++ + + G + E RT + Sbjct: 240 PATGAVSPVAADSTSDDSAAPGSSVTAPSVTAPSAPDPSATGSAGAVPEAGRTQGALQAA 299 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 + + F S L K+ + L + + GHTD++ N LS+ Sbjct: 300 LEGTSLTFAVGESTLDASVRAGLDKVAQALLPGDLTVLVGGHTDST---GPLAFNQALSM 356 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 DRA +A + L++ GV +R+ +++GF R + +ANRR+D+ Sbjct: 357 DRARAAREYLVQRGVPAERV-RVAGFGPERPVADNATVAGRAANRRVDVT 405 >gi|239995142|ref|ZP_04715666.1| TolC family type I secretion outer membrane protein [Alteromonas macleodii ATCC 27126] Length = 648 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ LPE LQ + E L + + I GH A N RLS RA + Sbjct: 540 FASNSTEVLPEYENSLQDVIEALNNDPNSGVIIHGHAS---LDGDAAYNQRLSERRAKAV 596 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRID 335 +LM K+ + RI+ + G+ R + SD N+ NRRI+ Sbjct: 597 ASLLMNKANIEARRITAV-GYGESRPLVDEESDAANARNRRIE 638 >gi|332342400|gb|AEE55734.1| outer membrane protein OmpA [Escherichia coli UMNK88] Length = 350 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 222 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|306812596|ref|ZP_07446789.1| outer membrane protein A [Escherichia coli NC101] gi|305853359|gb|EFM53798.1| outer membrane protein A [Escherichia coli NC101] Length = 365 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 237 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 293 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 294 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 352 Query: 338 VED 340 V+ Sbjct: 353 VKG 355 >gi|262198258|ref|YP_003269467.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262081605|gb|ACY17574.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 533 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE++ +L + + G+TD R N LS RA S Sbjct: 427 FDTGQSALDPESMHLLNTQVLPQLEMAGGMYVRIEGNTDNV---GDKRGNQALSEARAQS 483 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 L++ G++ R+S G ++ +ANRR DI+ Q Sbjct: 484 VLDYLVQKGINAKRLSA-RGNGSDSPVASNKTADGRAANRRTDIVFISGQ 532 >gi|149917241|ref|ZP_01905740.1| OmpA domain protein [Plesiocystis pacifica SIR-1] gi|149821848|gb|EDM81242.1| OmpA domain protein [Plesiocystis pacifica SIR-1] Length = 188 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 14/152 (9%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + AK I +T + E T I+I F+ ++ + +L Sbjct: 20 ESAKVIEATELPPPPEPPKVDARVEVTDDKIVIH-----EKIAFEYDAAKIQRVSHDLLA 74 Query: 254 KIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 ++ +V+ E+I + GH A A N LS RA + L+K GV E R+ Sbjct: 75 EVAQVILDNPRIELIRVEGHASAE---GEADHNLELSQRRAEAVRAHLVKKGGVPEARLE 131 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVED 340 GF R ++ NRR++ ++ Sbjct: 132 A-EGFGEDRPIADNETEEGRGQNRRVEFVIVR 162 >gi|149186387|ref|ZP_01864700.1| hypothetical protein ED21_22898 [Erythrobacter sp. SD-21] gi|148829976|gb|EDL48414.1| hypothetical protein ED21_22898 [Erythrobacter sp. SD-21] Length = 288 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 68/259 (26%), Gaps = 14/259 (5%) Query: 95 QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154 Q+ D+ + +++ T + ++ + E + T Sbjct: 28 QDSTDIDVYGSALTEGPEVEGIITARSGDRIQVTMENGQNTTIIVDEGTEVKATGGFLGL 87 Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 TD + E L +K K + A I A++ Sbjct: 88 GSKTLRTDQLMNGLPVEVETLQFQGGLVAKQVKLKASDMETAAMIRGATQQQFAEHRADI 147 Query: 215 VLFETTRTGILISIIDQRNT-------PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + + + FD PE + I + Sbjct: 148 DANAAAAEALKGRMANIDQYNVRGVTNVYFDSGKWNISPEGQREICDIASQAEAMDNALL 207 Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 + G+TD+ N LS RA L + G R+ +G + + Sbjct: 208 LVVGYTDSD---GNEDYNQVLSERRAGRVVNYLQQKCGWQPWRMLTPTGMSESDPAADNS 264 Query: 326 PMN--SANRRIDILVEDRQ 342 + NRR+ + + + Sbjct: 265 TPEGKAQNRRVSVNILVSK 283 >gi|289672566|ref|ZP_06493456.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae FF5] Length = 48 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINA 56 EN+Q IIIK+ ++ G+WKI +ADF T +MAFFLV+W+I++ Sbjct: 2 ENNQPIIIKRVKRFG-GGHHGGAWKIAFADFATAMMAFFLVLWLISS 47 >gi|227884084|ref|ZP_04001889.1| OOP family OmpA-OmpF porin [Escherichia coli 83972] gi|300978356|ref|ZP_07174229.1| outer membrane protein A [Escherichia coli MS 45-1] gi|301047785|ref|ZP_07194839.1| outer membrane protein A [Escherichia coli MS 185-1] gi|227838836|gb|EEJ49302.1| OOP family OmpA-OmpF porin [Escherichia coli 83972] gi|300300348|gb|EFJ56733.1| outer membrane protein A [Escherichia coli MS 185-1] gi|300409701|gb|EFJ93239.1| outer membrane protein A [Escherichia coli MS 45-1] gi|315291176|gb|EFU50536.1| outer membrane protein A [Escherichia coli MS 153-1] Length = 358 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 230 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|152969543|ref|YP_001334652.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238894012|ref|YP_002918746.1| outer membrane protein A [Klebsiella pneumoniae NTUH-K2044] gi|7442975|pir||JC6558 outer membrane protein A precursor - Klebsiella pneumoniae gi|150954392|gb|ABR76422.1| outer membrane protein 3a (II*;G;d) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546328|dbj|BAH62679.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 356 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + G+TD N +LS Sbjct: 228 KSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRI---GSEAYNQQLS 284 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +IS G + +A +RR++I Sbjct: 285 EKRAQSVVDYLVAKGIPAGKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 343 Query: 338 VED 340 V+ Sbjct: 344 VKG 346 >gi|238782712|ref|ZP_04626742.1| OmpA family protein [Yersinia bercovieri ATCC 43970] gi|238716372|gb|EEQ08354.1| OmpA family protein [Yersinia bercovieri ATCC 43970] Length = 168 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +FD P +Q IG+ L + GHTDA N +LS R Sbjct: 61 NKVLFDSDVRKLNPSGEQTVQNIGKALTAVGITHFRVDGHTDAM---GEDSYNQQLSYQR 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A + L G+ I + G + + NRR+ ++V Sbjct: 118 AAAVADTLTTIGIPRKNID-VRGRGKLEPVADNRTAKGRAENRRVAMIVTAP 168 >gi|325068016|ref|ZP_08126689.1| OmpA/MotB domain protein [Actinomyces oris K20] Length = 553 Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 58/208 (27%), Gaps = 10/208 (4%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 L+ + + D++ + + I K+ Sbjct: 161 ELAPGEDMTSYLSFGKVDTDTVTVMVPMAGFTTVSVLDAGDAKKAKIDLSIAQAALKQSS 220 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D+ + + + I +++ F S+ L Sbjct: 221 HDVPELAAPVAIERYTRALDDSTSTHAGGKDITVTLASDVT---FASDSADLASGAEAQL 277 Query: 253 QKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + L +++ GHTD N LS RA + L + + + Sbjct: 278 NTVASQLKQHPDGGTLTVVGHTDDVQ---DDAYNQTLSEKRANAVKTRLEQLTSLDKWQT 334 Query: 311 KISGFAHHRLK--IASDPMNSANRRIDI 336 +SG K SD +ANRR++I Sbjct: 335 SVSGKGESEPKIKDTSDEARAANRRVEI 362 >gi|302341627|ref|YP_003806156.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075] gi|301638240|gb|ADK83562.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075] Length = 361 Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 77/280 (27%), Gaps = 15/280 (5%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F P + + + NPP RSS + DE K L Sbjct: 84 FQPKIVSDLEGAYTRLVYLNPPGRSSLEVLRNYQDEVAAKGGEILYQCKGEACGGDPARG 143 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK- 187 S + D C + + M Sbjct: 144 AAGGGGEQSLMMKLVAPERVTDDYFSPGGCALQSRIRDQRYFAARIPADGGDAYLALMTW 203 Query: 188 ------RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + D A ++ + + + V + + FD Sbjct: 204 VSTSSGSCRAFNDRAFTLAVLIEPKAREQKMVTVKAAEMASNLDSQGRIALYGVHFDFDK 263 Query: 242 SIPLPETIVVLQ-KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 ++ PE+ LQ + A I + GHTD N LS RA + + L Sbjct: 264 AVVKPESRPTLQEIAALLAADPALEILVVGHTDNQ---GGFAYNVELSQRRAQAVVKALT 320 Query: 301 -KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 GV+ R++ G ++D + NRR++++ Sbjct: 321 GDFGVAPGRLTPF-GAGMAAPTASNDSEEGRAKNRRVELV 359 >gi|256420785|ref|YP_003121438.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] gi|256035693|gb|ACU59237.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] Length = 586 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 13/124 (10%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284 ++ ++ + I P + L K+ +L ++ I I HTD + A N Sbjct: 466 VNTAITMQEIYYEVNEFILTPASHPALDKLVALLKDHPQMEIEISAHTDNT---GSAAYN 522 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDI 336 +LS RA + L+ G+ + R+ + G+ + + NRRI++ Sbjct: 523 QQLSEKRALNCVAYLVDKGIDKKRL-QYKGYGATKPVAPNTNPDGTDNPEGRRLNRRIEL 581 Query: 337 LVED 340 + Sbjct: 582 RILK 585 >gi|331641486|ref|ZP_08342621.1| outer membrane protein A [Escherichia coli H736] gi|331038284|gb|EGI10504.1| outer membrane protein A [Escherichia coli H736] Length = 370 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 242 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 298 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 299 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 357 Query: 338 VED 340 V+ Sbjct: 358 VKG 360 >gi|319952716|ref|YP_004163983.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319421376|gb|ADV48485.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 337 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + P+ ++ +I +L + +SI GHTD+ N +LS+DRA + Sbjct: 236 FDTDKATLKPDGETLVAEIFTLLNENDSLKLSIEGHTDS---SGNVERNKQLSMDRANTV 292 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L G++ +R++ GF +D + NRR++++ Sbjct: 293 LYTLAGKGIAINRLTA-KGFGAKNPISPNDSEENKAKNRRVELV 335 >gi|283784777|ref|YP_003364642.1| outer membrane protein A [Citrobacter rodentium ICC168] gi|282948231|emb|CBG87798.1| outer membrane protein A [Citrobacter rodentium ICC168] Length = 351 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 223 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDTYNQGLS 279 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ D+IS G + +A +RR++I Sbjct: 280 EKRAQSVVDYLISKGIPADKISA-RGMGESNPVTGSTCDNVKARAALIDCLAPDRRVEIE 338 Query: 338 VED 340 V+ Sbjct: 339 VKG 341 >gi|312962752|ref|ZP_07777240.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens WH6] gi|311282969|gb|EFQ61562.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens WH6] Length = 166 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 67 FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 123 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + L+ GV+ ++ +S + R + NRR+++ Sbjct: 124 RYLVLQGVAPGQLELVS-YGKERPVATGHDEQSWAQNRRVEL 164 >gi|238055498|sp|B7LNW7|OMPA_ESCF3 RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II; Flags: Precursor Length = 351 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 223 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 279 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 280 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 338 Query: 338 VED 340 V+ Sbjct: 339 VKG 341 >gi|218778866|ref|YP_002430184.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760250|gb|ACL02716.1| OmpA/MotB domain-containing protein [Desulfatibacillum alkenivorans AK-01] Length = 281 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 70/196 (35%), Gaps = 35/196 (17%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD------NIVKGVLFETTRTGILISIID 230 P + A + + L+ + + D V +T G LISI D Sbjct: 62 PGGLSPMDAEGKGRSLKPPIHPLMDAEDESLPDFVGLSAESSNQVDIRSTGNGSLISIRD 121 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSL 289 Q +F+ +S P L ++ E++ + I GHTD P + NW LS Sbjct: 122 QL---LFEDGASSIKPSAKAFLTRLAEIINADNFPVVITGHTDDRPPEEKGVQSNWELSA 178 Query: 290 DRAYSAYQVLMKS--------------GVS--------EDRISKISGFAHHRLKIASDPM 327 RA + Y+ GV+ RI + G + ++D Sbjct: 179 RRAMAVYRFFYDQYLEQLAAREREANGGVAPVNLPNKYPKRID-VYGCGPSQPVASNDTP 237 Query: 328 --NSANRRIDILVEDR 341 + N R++IL++ R Sbjct: 238 QTRALNNRVEILMDKR 253 >gi|15594625|ref|NP_212414.1| flagellar motor protein MotB [Borrelia burgdorferi B31] gi|195941366|ref|ZP_03086748.1| flagellar motor protein MotB [Borrelia burgdorferi 80a] gi|216264425|ref|ZP_03436417.1| flagellar motor apparatus [Borrelia burgdorferi 156a] gi|218249216|ref|YP_002374803.1| flagellar motor apparatus [Borrelia burgdorferi ZS7] gi|221217732|ref|ZP_03589200.1| flagellar motor apparatus [Borrelia burgdorferi 72a] gi|223888999|ref|ZP_03623590.1| flagellar motor apparatus [Borrelia burgdorferi 64b] gi|224533159|ref|ZP_03673759.1| flagellar motor apparatus [Borrelia burgdorferi WI91-23] gi|224533695|ref|ZP_03674283.1| flagellar motor apparatus [Borrelia burgdorferi CA-11.2a] gi|225549020|ref|ZP_03769995.1| flagellar motor apparatus [Borrelia burgdorferi 94a] gi|225550090|ref|ZP_03771050.1| flagellar motor apparatus [Borrelia burgdorferi 118a] gi|226320581|ref|ZP_03796141.1| flagellar motor apparatus [Borrelia burgdorferi 29805] gi|226321598|ref|ZP_03797124.1| flagellar motor apparatus [Borrelia burgdorferi Bol26] gi|1165265|gb|AAA85604.1| MotB [Borrelia burgdorferi] gi|1185054|gb|AAB58963.1| flagellar motor apparatus [Borrelia burgdorferi] gi|2688186|gb|AAC66668.1| flagellar motor rotation protein B (motB) [Borrelia burgdorferi B31] gi|215980898|gb|EEC21705.1| flagellar motor apparatus [Borrelia burgdorferi 156a] gi|218164404|gb|ACK74465.1| flagellar motor apparatus [Borrelia burgdorferi ZS7] gi|221192409|gb|EEE18628.1| flagellar motor apparatus [Borrelia burgdorferi 72a] gi|223885815|gb|EEF56914.1| flagellar motor apparatus [Borrelia burgdorferi 64b] gi|224511886|gb|EEF82287.1| flagellar motor apparatus [Borrelia burgdorferi WI91-23] gi|224512988|gb|EEF83351.1| flagellar motor apparatus [Borrelia burgdorferi CA-11.2a] gi|225369202|gb|EEG98655.1| flagellar motor apparatus [Borrelia burgdorferi 118a] gi|225370246|gb|EEG99684.1| flagellar motor apparatus [Borrelia burgdorferi 94a] gi|226232787|gb|EEH31540.1| flagellar motor apparatus [Borrelia burgdorferi Bol26] gi|226234000|gb|EEH32721.1| flagellar motor apparatus [Borrelia burgdorferi 29805] gi|312147980|gb|ADQ30639.1| flagellar motor apparatus [Borrelia burgdorferi JD1] gi|312149596|gb|ADQ29667.1| flagellar motor apparatus [Borrelia burgdorferi N40] Length = 260 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 16/162 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248 Q + ++ + K ++ GI+IS+ FD +S+ ++ Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIVVRQEERGIVISLAAD---AFFDSASADVKLEENRDS 147 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302 I + L+ I GHTD + + NW LS R+ + L +S Sbjct: 148 IQKIASFIGFLSPRGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQS 207 Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 V + ++SGF R D NRRIDIL+ Sbjct: 208 DVKRIENNFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 17/39 (43%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57 + + + Y D +T+L+ FF+ M+ +N Sbjct: 4 RIKKPSKCDEGSPDYMLTYGDMVTLLLVFFVTMFSLNDI 42 >gi|254487047|ref|ZP_05100252.1| OmpA family protein [Roseobacter sp. GAI101] gi|214043916|gb|EEB84554.1| OmpA family protein [Roseobacter sp. GAI101] Length = 191 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S P+ L + + + I GHTD+ N +LSL+RA S Sbjct: 93 FFKTDSYRIHPQGKARLAEFFKSTGAVS--YIISGHTDSR---ASDAYNMKLSLNRANSV 147 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + +SG RI+ + G+ ++ + NRR++I+ Sbjct: 148 AAIAQQSG---ARIADVRGYGERIPAASNSTAAGMAKNRRVEII 188 >gi|295134914|ref|YP_003585590.1| OmpA/MotB domain-containing protein [Zunongwangia profunda SM-A87] gi|294982929|gb|ADF53394.1| OmpA/MotB domain-containing protein [Zunongwangia profunda SM-A87] Length = 618 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 11/116 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + + F+ + P L I VL E+ I HTD+ N LS Sbjct: 504 KIDPIFFEFNEYDIRPRAAKQLDHIVYVLESFPEMKIKIESHTDSR---GSDTYNLLLSQ 560 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 +RA S L+ G++E+RI I G+ + +D + NRR + ++ Sbjct: 561 NRAKSTKNYLISRGIAENRIVSIKGYGEIEILNRCVNGVECNDEEHEENRRSNFII 616 >gi|149286|gb|AAA25119.1| outer membrane protein II [Klebsiella pneumoniae] Length = 243 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + G+TD N +LS Sbjct: 124 KSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRI---GSEAYNQQLS 180 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +IS G + +A +RR++I Sbjct: 181 EKRAQSVVDYLVAKGIPAGKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 239 Query: 338 VED 340 V+ Sbjct: 240 VKG 242 >gi|300982950|ref|ZP_07176384.1| outer membrane protein A [Escherichia coli MS 200-1] gi|300307039|gb|EFJ61559.1| outer membrane protein A [Escherichia coli MS 200-1] gi|315296266|gb|EFU55573.1| outer membrane protein A [Escherichia coli MS 16-3] gi|324012909|gb|EGB82128.1| outer membrane protein A [Escherichia coli MS 60-1] Length = 354 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 226 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 282 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 283 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 341 Query: 338 VED 340 V+ Sbjct: 342 VKG 344 >gi|116623181|ref|YP_825337.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226343|gb|ABJ85052.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 911 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 6/119 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 D F+ +SSI +L+ + H + + GHTD + A N + Sbjct: 27 QTKDDWEEINFEFNSSILSDGYPSLLRLADLLSQHRDYKVKVTGHTD---YVGSAAYNDK 83 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 L+L RA + L+K GV + +++ SG + + NRR+D+ V D G Sbjct: 84 LALRRADAVKAFLVKYGVGDAQVTT-SGDGKRSPIVDNKTKEGRFMNRRVDLAVTDGSG 141 >gi|184159157|ref|YP_001847496.1| outer membrane protein [Acinetobacter baumannii ACICU] gi|213158280|ref|YP_002320331.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii AB0057] gi|215482606|ref|YP_002324798.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii AB307-0294] gi|239501025|ref|ZP_04660335.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter baumannii AB900] gi|301346652|ref|ZP_07227393.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii AB056] gi|301513292|ref|ZP_07238529.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii AB058] gi|301596453|ref|ZP_07241461.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii AB059] gi|183210751|gb|ACC58149.1| Outer membrane protein [Acinetobacter baumannii ACICU] gi|193078077|gb|ABO13012.2| peptidoglycan-associated lipoprotein precursor [Acinetobacter baumannii ATCC 17978] gi|213057440|gb|ACJ42342.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii AB0057] gi|213988269|gb|ACJ58568.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii AB307-0294] Length = 187 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS E LQ + L + +++ GHTD N L RA + Sbjct: 79 FDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 135 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 L+ SGV+ ++ +S + + NRR++I Sbjct: 136 QNYLITSGVNPQQLEAVS-YGKEAPVNPGHDESAWKENRRVEI 177 >gi|114327023|ref|YP_744180.1| outer membrane protein A [Granulibacter bethesdensis CGDNIH1] gi|114315197|gb|ABI61257.1| outer membrane protein A [Granulibacter bethesdensis CGDNIH1] Length = 361 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 7/107 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD + ++ + I + G+TD + N RLS+ RA Sbjct: 258 VFFDWDRADLTARAREIVAEAARASTQVQATRIEVNGYTDK---SGTPQYNQRLSVRRAQ 314 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 S L+K GV + I I GF + + NRR++I++ Sbjct: 315 SVAAELVKDGVPRNVIF-IHGFGETHPLVPTAQGVREPQNRRVEIIL 360 >gi|60115453|dbj|BAD90019.1| MotB [Pectobacterium carotovorum subsp. carotovorum] Length = 175 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 65/167 (38%) Query: 11 NDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 Q II+KK ++ GSWKI YADFMT +MA FLVMW+I + I +YF Sbjct: 2 KHQHPIIRKKRKSGHGGHHGGSWKIAYADFMTAMMALFLVMWLIAISTPMQLAQIAEYFR 61 Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 K +T+ D +P + + + +++ + R + Sbjct: 62 TPLKVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLD 121 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 ++ + + L ++G + + + K + + P Sbjct: 122 QLIEADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEP 168 Score = 38.4 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 1/111 (0%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 K +LT S+ +++ + + + + RL L +++ + Sbjct: 65 KVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEVRLNRLRERLDQLI 124 Query: 204 SGLVA-DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + +L E G+ I IID +N PMF S+ P +L+ Sbjct: 125 EADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEPYMRDILR 175 >gi|56696346|ref|YP_166703.1| OmpA family protein [Ruegeria pomeroyi DSS-3] gi|56678083|gb|AAV94749.1| OmpA family protein [Ruegeria pomeroyi DSS-3] Length = 415 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ PE+ V+L + + L + I I GH+ + A N LS RA S Sbjct: 314 FNYDSAAIRPESAVLLNALADGLRGTDAARIEIVGHSSSE---GAAEYNRALSQRRAASV 370 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L+ G++ DR+ G ++ NRR+++ Sbjct: 371 VAALVDMGLAADRL-AALGKGEDEPIASNADEAGRSLNRRVEV 412 >gi|89070199|ref|ZP_01157527.1| OmpA domain protein [Oceanicola granulosus HTCC2516] gi|89044215|gb|EAR50366.1| OmpA domain protein [Oceanicola granulosus HTCC2516] Length = 623 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 79/304 (25%), Gaps = 19/304 (6%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + + T+ + + +L + P + + Sbjct: 305 VSLVAALGTEQEAFDRVVGELENSLPDLFALEAVL----PQPPEEGDDGPVEFTATRSPE 360 Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 V L+ + ++S + + + + + + Sbjct: 361 GGVQLRGQVGDDLVNTTAENFARAKFADSDITMGTRLAEDLPQGWSVRVLAGLEALSKLE 420 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI---- 224 P + ++ R + I + V + Sbjct: 421 HGAVTVTPDRVDVRGVSGLRDASGEISRLLIGKFGESADFEIDVTYEEAFDPLAALPTPE 480 Query: 225 ----LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279 I I FD S+ ++ V+ I EVL T+ I + G+TD+ Sbjct: 481 ECLAKIKAISDTRKITFDPGSADIDGDSQRVVDDIAEVLRQCTDLEIEVAGYTDSQ---G 537 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 N RLS RA + L V + G+ +D NRRI+ Sbjct: 538 REEMNQRLSQQRAEAVLAALRLRRVPVGAFRAV-GYGEAEPIADNDTAEGREANRRIEFR 596 Query: 338 VEDR 341 + + Sbjct: 597 LIEP 600 >gi|99078059|ref|YP_611317.1| OmpA/MotB [Ruegeria sp. TM1040] gi|99035197|gb|ABF62055.1| OmpA/MotB [Ruegeria sp. TM1040] Length = 653 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 87/301 (28%), Gaps = 19/301 (6%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + + T + + + + + PE ++ + I + Sbjct: 307 VTLVAAQGTPEALFDRVVGELENALPQVFVLHAVLPE----PEETTADIIPEFTATLSPE 362 Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 V L+ ++ ++ + +NS + + D + Sbjct: 363 GQVQLRGRLSDNAQKRTVDSYAKARFGSDTVYVATRNSPDLPGVWPIRVLAALDALAQLE 422 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL--- 225 + P L + ++ + D + ++ Sbjct: 423 RGSVTVTPELVAVRGMSHVENASAEIARMLSQKLGEAEDYDLDITFEKPPEPEDKLMAPQ 482 Query: 226 -----ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279 ++ I + + F+ S+ ++ V+ KI ++L E + I+GHTD+ Sbjct: 483 LCEAELAAIQRADKIAFEPGSATVAADSARVIDKIAKLLQQCGEIPLEIQGHTDSQ---G 539 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 N LS RA S L + G+ ++D NRRI+ Sbjct: 540 REEMNQNLSQARAQSVLNALRARRILTGSFVA-RGYGEDNPIASNDTEEGREANRRIEFR 598 Query: 338 V 338 + Sbjct: 599 L 599 >gi|195940407|ref|ZP_03085789.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4024] Length = 267 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 139 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 195 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 196 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 254 Query: 338 VED 340 V+ Sbjct: 255 VKG 257 >gi|170020642|ref|YP_001725596.1| outer membrane protein A [Escherichia coli ATCC 8739] gi|256023341|ref|ZP_05437206.1| outer membrane protein A [Escherichia sp. 4_1_40B] gi|307137587|ref|ZP_07496943.1| outer membrane protein A [Escherichia coli H736] gi|169755570|gb|ACA78269.1| OmpA domain protein transmembrane region-containing protein [Escherichia coli ATCC 8739] gi|320637825|gb|EFX07617.1| outer membrane protein A [Escherichia coli O157:H7 str. G5101] gi|320642950|gb|EFX12151.1| outer membrane protein A [Escherichia coli O157:H- str. 493-89] gi|320653723|gb|EFX21797.1| outer membrane protein A [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 365 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 237 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 293 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 294 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 352 Query: 338 VED 340 V+ Sbjct: 353 VKG 355 >gi|148262600|ref|YP_001229306.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4] gi|146396100|gb|ABQ24733.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4] Length = 199 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 52/174 (29%), Gaps = 7/174 (4%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 ++ +P K K + + + ++ G + T Sbjct: 30 KDEVVPAAEPVKSAETSTVKPVLNETGIKDQPIKEAPITSLPGGDIANTNTANADARPEA 89 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 FD S P L +++ I I GH D N L Sbjct: 90 ALEKIFFDFDSYALTPIARDTLTNNAKIMGKRAGVKIQIEGHCDEL---GSDEYNLALGE 146 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 RA SA Q L+ GV R+ + + + + + NRR + ++ + Sbjct: 147 KRAKSAMQYLVTMGVPAQRL-AVISYGKEKPADPGHGEAAWAKNRRNEFVIISK 199 >gi|218553544|ref|YP_002386457.1| outer membrane protein A [Escherichia coli IAI1] gi|331676747|ref|ZP_08377443.1| outer membrane protein A [Escherichia coli H591] gi|218360312|emb|CAQ97862.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI1] gi|331075436|gb|EGI46734.1| outer membrane protein A [Escherichia coli H591] Length = 374 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 246 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 302 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 303 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 361 Query: 338 VED 340 V+ Sbjct: 362 VKG 364 >gi|62179592|ref|YP_216009.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127225|gb|AAX64928.1| putative hydrogenase, membrane component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714061|gb|EFZ05632.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 350 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 222 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ ++IS G + P + +RR++I Sbjct: 279 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|291085616|ref|ZP_06353500.2| outer membrane protein A [Citrobacter youngae ATCC 29220] gi|291070418|gb|EFE08527.1| outer membrane protein A [Citrobacter youngae ATCC 29220] Length = 360 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 232 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 288 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ D+IS G + +A +RR++I Sbjct: 289 EKRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 347 Query: 338 VED 340 V+ Sbjct: 348 VKG 350 >gi|260768264|ref|ZP_05877198.1| outer membrane protein [Vibrio furnissii CIP 102972] gi|260616294|gb|EEX41479.1| outer membrane protein [Vibrio furnissii CIP 102972] Length = 176 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 7/156 (4%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + + LQD + + ++ + ++ +F S Sbjct: 2 EAPQANQIADLQDDDSDGVVNARDICPGTPSGAEIDNDGCGEVIRNSAKRQLHILFANDS 61 Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 P +Q + E L I I+G+T N LS RA + + L+ Sbjct: 62 YEINPVFADQIQAMAEFLKTYQSASIEIQGYTSKV---GTNEYNQELSQKRAEAVERKLL 118 Query: 301 KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334 G+S R+ +I GF RL D ++ NRR+ Sbjct: 119 SYGISPKRV-RIIGFGETRLLDDGDTNSAHAVNRRV 153 >gi|149925995|ref|ZP_01914258.1| OmpA/MotB [Limnobacter sp. MED105] gi|149825283|gb|EDM84494.1| OmpA/MotB [Limnobacter sp. MED105] Length = 179 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ E L +VL++ I + GH DA A N LS +RA Sbjct: 78 FQLGSAELPAELKKQLDVFAQVLSNRPSDSPPIVVTGHADA---SGDASLNQVLSSERAK 134 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + L + GVS R+ ++ G +L ++P ANRR++I Sbjct: 135 AVKTYLTQKGVSP-RLLRVEGKGAEKLVDVNNPFAPANRRVEI 176 >gi|90021493|ref|YP_527320.1| NAD-dependent DNA ligase [Saccharophagus degradans 2-40] gi|89951093|gb|ABD81108.1| OmpA/MotB [Saccharophagus degradans 2-40] Length = 195 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 3/118 (2%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 I + F+ S E L+K+ S + + N Sbjct: 74 EITHIEDVVYFEFDSKELTAEAEQKLEKLANEAKKSENENIVVVLKGFADATGPEEYNQE 133 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS +RA + L +GV E R + +D + NRR+ +++E + Sbjct: 134 LSKERAQNVKAFLESNGV-EAREYNVVALGESNPVADNDTKQGRAQNRRVVLVIEPTE 190 >gi|157374383|ref|YP_001472983.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3] gi|157316757|gb|ABV35855.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3] Length = 189 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ + + + L ++ + L + + G+TDA N +LS RA + Sbjct: 85 FEFAKAEVMFSQWKTLARLKQFLQRFDVNLCLLGYTDAM---GSLDLNQKLSAQRAMAVK 141 Query: 297 QVLMK-SGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 Q+L++ G S R + G +++ ++NRR++ +V+ Sbjct: 142 QILVEDYGFSSSRFV-VKGMGSESPIASNEKPEGRASNRRVEFVVD 186 >gi|320196555|gb|EFW71178.1| Outer membrane protein A precursor [Escherichia coli WV_060327] gi|330910729|gb|EGH39239.1| outer membrane protein A precursor [Escherichia coli AA86] Length = 358 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 230 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQALS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|218780987|ref|YP_002432305.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762371|gb|ACL04837.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] Length = 199 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 47/140 (33%), Gaps = 7/140 (5%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 +S + + + + F SS PE + +L+ L + Sbjct: 64 VSEEPMGGDTGPEAVKPSVNVDEMRVRFNTENVHFAFDSSDLSPEAMAILKDKAFFLRLN 123 Query: 263 TEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I+GH D N L RA SA L G+ RI+ IS + Sbjct: 124 PSKGVLIKGHCDER---GSLEYNLALGDRRANSAKNFLTDLGIDARRINTIS-YGEEMPL 179 Query: 322 --IASDPMNSANRRIDILVE 339 +++ + NRR + +E Sbjct: 180 DPASNEAAWAVNRRCEFALE 199 >gi|158536391|gb|ABW72720.1| outer membrane protein A [Escherichia coli] gi|158536395|gb|ABW72722.1| outer membrane protein A [Escherichia coli] gi|158536397|gb|ABW72723.1| outer membrane protein A [Escherichia coli] Length = 358 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|294651148|ref|ZP_06728483.1| OmpA/MotB domain protein [Acinetobacter haemolyticus ATCC 19194] gi|292822980|gb|EFF81848.1| OmpA/MotB domain protein [Acinetobacter haemolyticus ATCC 19194] Length = 255 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+I +L ++ L + I GHTD+ A N LS +RA + Sbjct: 154 FESGSAILTETGKRILDEMAVALNKVGGKQVKIIGHTDS---SGDASRNVILSKERAVAV 210 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ ++ DR+S G + + NRRI+ V Sbjct: 211 QDYLVSKNIATDRLST-EGKGSSEPIADNATADGRRKNRRIEFEVL 255 >gi|149911588|ref|ZP_01900201.1| outer membrane protein OmpA [Moritella sp. PE36] gi|149805367|gb|EDM65379.1| outer membrane protein OmpA [Moritella sp. PE36] Length = 303 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 6/115 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 +I + +F +S+ + + +H + I +TD N Sbjct: 184 VIVPTTLNSNTLFKFNSAEISDSSALAKLAKKMSASHVEINVEIVAYTDT---SGPEAYN 240 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 +LS RA + +K GV+ ++ + ++ NRR+DI+ Sbjct: 241 LKLSKKRAEAVRDYFIKQGVN-KQVINTAWKGEANPIASNKTRAGRIKNRRVDII 294 >gi|146300030|ref|YP_001194621.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146154448|gb|ABQ05302.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 712 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 101/303 (33%), Gaps = 27/303 (8%) Query: 58 DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 D K I+ K + D + E ++ D E+ T N+V Sbjct: 416 DIYQFKEIKDLIVEDCKQFIAGVITDIDTKLALESATVILQDS---ENKTLNTVTTSADG 472 Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + +E +L + +K D + + I EE Sbjct: 473 KFSFTAACETSYKVSAFKEKYTNESVTLTLDKTRDKINDASLALKSLEVIKLEEKEKAEK 532 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGL------------VADNIVKGVLFETTRTGIL 225 +++I+ + K+ +LA + + + + E Sbjct: 533 KRQQEIIIEEENKKKTELAAIELKKKEKKAKEAEIAAAEVRKNEKVKEILEKEKDVIRDK 592 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284 +I + + FD + E+ VVL ++ E++ + I I HTD+ + N Sbjct: 593 DRLIIKTDPIYFDYNLWYIRKESKVVLGRVVELMKKYPGMVIEIGSHTDSR---GNEKFN 649 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS-------ANRRIDIL 337 LS RA S + +++SG+ RIS G+ I ++ NRR + + Sbjct: 650 ADLSQKRANSTREFIIQSGIEAKRISA-KGYGESVPIIKCKTDDACSEEEHELNRRSEFV 708 Query: 338 VED 340 ++ Sbjct: 709 IKS 711 >gi|298506340|gb|ADI85063.1| peptidoglycan-associated lipoprotein [Geobacter sulfurreducens KN400] Length = 187 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 7/106 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 FD + + +L E L + V I GHTD N L RA Sbjct: 83 VYFDFDAWVLNGAAREILAGNAEWLRKNPGVAVILEGHTDER---GSDAYNLALGEQRAK 139 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 SA + L G+ R++ +S + + + + + NRR++ + Sbjct: 140 SAMKYLQTLGIDAGRMTVVS-YGEEKPAVEGHDESAWAGNRRVEFI 184 >gi|148975972|ref|ZP_01812761.1| Conserved hypothetical outer membrane protein [Vibrionales bacterium SWAT-3] gi|145964717|gb|EDK29970.1| Conserved hypothetical outer membrane protein [Vibrionales bacterium SWAT-3] Length = 211 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 13/156 (8%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 L ++++ +L + ++ S + K + R G+L I F Sbjct: 56 ALQIEQQSDSNELKQALARQSSLGINKTGCKTWISSQDRHGLLARIH-------FAFDQH 108 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P L ++ L S +++ GHTD+ N L + RA + L+ Sbjct: 109 SLTPMGSKALSQLASELQTSGSSVTVDGHTDS---SGDEGYNQALGMQRALTTSDALIVD 165 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 GV + + I F + +++ + NRR +I Sbjct: 166 GVDKHHLV-IRSFGESKPIASNETVEGRANNRRAEI 200 >gi|45655964|ref|YP_000050.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599197|gb|AAS68687.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 687 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 82/227 (36%), Gaps = 8/227 (3%) Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 + +++G ++ +++ ++ T+ + T + + Sbjct: 461 LPIQVGEGKTEETKIEQPIENQKPNSAALKVIVADASTKQIIPDAKVTLFTPMNRKGESL 520 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 K L + +K IS +++ + + G + + + + Sbjct: 521 VQDADKKSFLIKKLPDNDFELFATASKYISESINIIQKNISKNGTVTIYLKAESDVDPVY 580 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSL 289 F+ + + E +L + L ++++ I I GHTD N RLS Sbjct: 581 NLR-VYFEFNKTKITEENKKLLDPLVGYLLKNASDKIEIGGHTDNV---ASKEYNTRLSA 636 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 RA + Y+ L+ G+ E R+ +I + + + ++ + NRR+ Sbjct: 637 KRARNVYEYLLSKGIPEKRM-RIRAYWYSQPDADNETETGRAKNRRV 682 >gi|293410201|ref|ZP_06653777.1| flagellar motor protein MotB [Escherichia coli B354] gi|291470669|gb|EFF13153.1| flagellar motor protein MotB [Escherichia coli B354] Length = 58 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 31/57 (54%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAI 65 + II+ K+ GSWKI YADFMT +MAFFLVMW+I+ + I Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQI 58 >gi|15618690|ref|NP_224976.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae CWL029] gi|15836314|ref|NP_300838.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae J138] gi|16752260|ref|NP_445628.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae AR39] gi|33242140|ref|NP_877081.1| peptidoglycan-associated lipoprotein precursor [Chlamydophila pneumoniae TW-183] gi|4377090|gb|AAD18919.1| Peptidoglycan-Associated Lipoprotein [Chlamydophila pneumoniae CWL029] gi|7190005|gb|AAF38862.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae AR39] gi|8979154|dbj|BAA98989.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae J138] gi|33236650|gb|AAP98738.1| peptidoglycan-associated lipoprotein precursor [Chlamydophila pneumoniae TW-183] Length = 192 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPL-PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S E + +L + + + + + I GHTD A N L RA + Sbjct: 88 FATDSYTIKGEENLAILTNLVHYMKKNPKATLYIEGHTDER---GAASYNLALGARRANA 144 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 + L K G+S DR+S IS + + ++ NRR + + R Sbjct: 145 IKEHLRKQGISADRLSTIS-YGKEHPLNSGHNELAWQQNRRTEFKIHAR 192 >gi|323497295|ref|ZP_08102314.1| OmpA family protein [Vibrio sinaloensis DSM 21326] gi|323317652|gb|EGA70644.1| OmpA family protein [Vibrio sinaloensis DSM 21326] Length = 205 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 70/190 (36%), Gaps = 13/190 (6%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + D + E Y + + Q A S L+ + Sbjct: 20 QDIANMTEDMLDTAPKTDFEVRYPEWGNDPKVAQSGVEGPMGQTRAPYYKDLQSFLLKNG 79 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-R 269 + VL I++ + D F+ SS +P++ L +GE L+ + + Sbjct: 80 VDYEVL---PGNHIMVKLKDTIK---FNTGSSQVMPDSAYWLDMMGEYLSTQPGIDIVID 133 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 GH D++ N LS+ RA + Q L+++ V+ D I G+ ++ M Sbjct: 134 GHADST---GAPSFNDSLSMKRAKAVKQQLVRNNVAMDSIFT-RGYGEFVPACSNASMAG 189 Query: 330 A--NRRIDIL 337 NRR+++L Sbjct: 190 KACNRRVEVL 199 >gi|319952843|ref|YP_004164110.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319421503|gb|ADV48612.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 644 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 44/118 (37%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 FD S + +++K+ L I I HTDA N LS Sbjct: 531 NLEKIYFDFDQSYIRKDAQAIMEKVVAYLNQYPNTKIRIGSHTDAR---ANDNYNLSLSE 587 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPM-----NSANRRIDILVED 340 RA + Y L+K G+ R+ GF +L ++ + NRR + +V + Sbjct: 588 RRANATYDYLVKKGIDASRL-TFKGFGETQLTNACDNNTNCSSEKHQLNRRSEFIVVE 644 >gi|298292993|ref|YP_003694932.1| peptidoglycan-associated lipoprotein [Starkeya novella DSM 506] gi|296929504|gb|ADH90313.1| peptidoglycan-associated lipoprotein [Starkeya novella DSM 506] Length = 164 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + FD + P+ L K + L H +I GH D N L R Sbjct: 55 DRVFFDSDQTDLTPQAQATLDKQAQWLNHYGKYTFTIEGHADER---GTREYNIALGARR 111 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRRIDILVEDRQG 343 A S L++ GVS R+ IS + R +D S NRR + V + G Sbjct: 112 AQSVRDYLVQRGVSASRMRTIS-YGKERPVAVCNDISCWSQNRRA-VTVLNATG 163 >gi|238024317|ref|YP_002908549.1| hypothetical protein bglu_2g09050 [Burkholderia glumae BGR1] gi|237878982|gb|ACR31314.1| OmpA/MotB [Burkholderia glumae BGR1] Length = 236 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 S +K+++ K + L+G +A R ++ I + Sbjct: 43 EASSRLADEIKQRQLETQRRKTLEQALAGPLAAG----------RVTLVDGRIGISGNVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPF---RNIARDNWRLSL 289 F +S P+ +L+ + L +++ + G D DNW LS Sbjct: 93 FAVNSDQLQPQGRALLRSLAGPLSAYLRDRDQILMVSGFADDQQVHAGNARFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 +RA + + +++GV + + F + ++ + + NRR++I Sbjct: 153 ERALTVTRAFIEAGVPAGSVFAAA-FGSEQPVSSNADEAGRAKNRRVEI 200 >gi|189347522|ref|YP_001944051.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245] gi|189341669|gb|ACD91072.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245] Length = 349 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 8/140 (5%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + + V + I + FD + + P + L +I ++L Sbjct: 212 IIETRPMQQKMVTVSADEMSRSITSTGKVSLYGIYFDTNKADIKPASKPALGEIAKLLKK 271 Query: 262 STEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 + + GHTD N LS RA + VL K G++ R++ +G A+ Sbjct: 272 QPAMKLHVVGHTDN---AGGYEFNVSLSKRRADAVVGVLQKEYGIAPGRLTA-NGVAYLA 327 Query: 320 LKIAS--DPMNSANRRIDIL 337 ++ + + NRR++++ Sbjct: 328 PVASNAAEAGRAKNRRVELV 347 >gi|758341|emb|CAA26037.1| outer membrane protein (ompA) [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 350 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIV---VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L L + + G TD N LS Sbjct: 222 KSDVLFNFNKSTLKPEGQQALDQLYIQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 279 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|332292958|ref|YP_004431567.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332171044|gb|AEE20299.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 640 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 12/120 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + N F+ + LQ+I +++ +I I HTD A N LS Sbjct: 524 KINPINFESNRYAINIFAAQQLQRIIDIMNEYPALIIKIESHTDQR---GGASYNQTLSE 580 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--------ANRRIDILVEDR 341 +RA S L+K+G++ RI GF R D + NRR D +V R Sbjct: 581 NRATSTRDYLIKNGITSSRIESAKGFGESRPIHICDEADDSCTEVQYLENRRSDFIVVSR 640 >gi|331651979|ref|ZP_08352998.1| outer membrane protein A (Outer membrane protein II) [Escherichia coli M718] gi|331050257|gb|EGI22315.1| outer membrane protein A (Outer membrane protein II) [Escherichia coli M718] Length = 375 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 247 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 303 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 304 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 362 Query: 338 VED 340 V+ Sbjct: 363 VKG 365 >gi|281600319|gb|ADA73303.1| Outer membrane protein A [Shigella flexneri 2002017] Length = 356 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 228 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 284 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 285 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 343 Query: 338 VED 340 V+ Sbjct: 344 VKG 346 >gi|189010293|ref|ZP_02805910.2| outer membrane protein A [Escherichia coli O157:H7 str. EC4076] gi|208815928|ref|ZP_03257107.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045] gi|208822372|ref|ZP_03262691.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042] gi|209397392|ref|YP_002269625.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115] gi|217325746|ref|ZP_03441830.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588] gi|291281957|ref|YP_003498775.1| OmpA domain protein transmembrane region-containing protein precursor [Escherichia coli O55:H7 str. CB9615] gi|293433254|ref|ZP_06661682.1| OOP family OmpA-OmpF porin [Escherichia coli B088] gi|300929657|ref|ZP_07145117.1| outer membrane protein A [Escherichia coli MS 187-1] gi|300949672|ref|ZP_07163655.1| outer membrane protein A [Escherichia coli MS 116-1] gi|300955388|ref|ZP_07167765.1| outer membrane protein A [Escherichia coli MS 175-1] gi|301022508|ref|ZP_07186383.1| outer membrane protein A [Escherichia coli MS 196-1] gi|301643481|ref|ZP_07243528.1| outer membrane protein A [Escherichia coli MS 146-1] gi|189001311|gb|EDU70297.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4076] gi|208732576|gb|EDZ81264.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045] gi|208737857|gb|EDZ85540.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042] gi|209158792|gb|ACI36225.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115] gi|217321967|gb|EEC30391.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588] gi|290761830|gb|ADD55791.1| OmpA domain protein transmembrane region-containing protein precursor [Escherichia coli O55:H7 str. CB9615] gi|291324073|gb|EFE63495.1| OOP family OmpA-OmpF porin [Escherichia coli B088] gi|299881205|gb|EFI89416.1| outer membrane protein A [Escherichia coli MS 196-1] gi|300317723|gb|EFJ67507.1| outer membrane protein A [Escherichia coli MS 175-1] gi|300450941|gb|EFK14561.1| outer membrane protein A [Escherichia coli MS 116-1] gi|300462395|gb|EFK25888.1| outer membrane protein A [Escherichia coli MS 187-1] gi|301078120|gb|EFK92926.1| outer membrane protein A [Escherichia coli MS 146-1] gi|320187167|gb|EFW61868.1| Outer membrane protein A precursor [Shigella flexneri CDC 796-83] gi|324019104|gb|EGB88323.1| outer membrane protein A [Escherichia coli MS 117-3] gi|326338147|gb|EGD61976.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str. 1125] Length = 354 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 226 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 282 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 283 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 341 Query: 338 VED 340 V+ Sbjct: 342 VKG 344 >gi|254253774|ref|ZP_04947091.1| OmpA/MotB [Burkholderia dolosa AUO158] gi|124898419|gb|EAY70262.1| OmpA/MotB [Burkholderia dolosa AUO158] Length = 232 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F S+ P L K+ I + G+TDA N LS R Sbjct: 126 GDAYFATDSATLTPAARAALDKLLNRQGDRHFSRIEVTGYTDAV---GSDAYNVALSRRR 182 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 A + L + G++ D +G ++ NRR++I ++ Sbjct: 183 ADAVAAYLRERGLNADSFVA-TGKGKADPGASNATAEGRASNRRVEISLQK 232 >gi|149185339|ref|ZP_01863656.1| outer membrane protein [Erythrobacter sp. SD-21] gi|148831450|gb|EDL49884.1| outer membrane protein [Erythrobacter sp. SD-21] Length = 210 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 10/145 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + L G+ T G I +++ + F S+ L + Sbjct: 56 MDQQIKELEEQTAGSGIDVSETDGGNAI-LVNLPDGVTFATGSATINSAFRNTLDNVAAN 114 Query: 259 LAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L I + G+TD + N RLS RA + L+ GVS RI + G+ Sbjct: 115 LVQYPNSLIDVYGYTDTT---GSDSLNQRLSEQRAQAVANYLISRGVSSSRI-RWQGYGE 170 Query: 318 --HRLKIASDPM--NSANRRIDILV 338 LK+ + NRR++I + Sbjct: 171 QYEHLKVKTADGVNEPMNRRVEIKI 195 >gi|113868486|ref|YP_726975.1| outer membrane protein and related peptidoglycan-associated proteins [Ralstonia eutropha H16] gi|113527262|emb|CAJ93607.1| outer membrane protein and related peptidoglycan-associated proteins [Ralstonia eutropha H16] Length = 177 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + + E +Q++G L E + + GHTD A N LS+ R Sbjct: 70 DKLLFGFNEDLIDAERAANVQRLGRALKGAGIERLRVDGHTDD---AGSAEYNQSLSVRR 126 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + ++L +G + + I ++ G R + NRR+ I+V Sbjct: 127 AEAVARLLAGAGFAPENI-EVRGRGKSRPVADNRTAAGRSENRRVAIVV 174 >gi|119953079|ref|YP_945288.1| flagellar motor protein MotB [Borrelia turicatae 91E135] gi|119861850|gb|AAX17618.1| chemotaxis MotB protein [Borrelia turicatae 91E135] Length = 262 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 62/167 (37%), Gaps = 18/167 (10%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL--- 245 +K Q + ++ + V+ G+++S++ FD +S+ Sbjct: 89 EKNKQASQASKNKSIIEFIEKIQSNRVIVRHYERGVVVSLLAD---AFFDSASAEVKLDD 145 Query: 246 -PETIVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 ETI + L + I GHTD I + NW LS RA + + ++ Sbjct: 146 NRETIQKIASFIGFLDNQGYNFKIEGHTDNVDVNINGIWKSNWELSSARAVNMLEQILNY 205 Query: 303 GVSEDRISK------ISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + +I +SGFA R D NRRIDIL+ Sbjct: 206 -TDQSKIQSIESKFEVSGFAGSRPVATDDTPEGRAYNRRIDILITSD 251 >gi|114769969|ref|ZP_01447579.1| OmpA domain protein [alpha proteobacterium HTCC2255] gi|114549674|gb|EAU52556.1| OmpA domain protein [alpha proteobacterium HTCC2255] Length = 210 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 10/146 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 ++ L + G L + T +++++ + FD SS L ++ Sbjct: 52 NELDVQEEELRKNLEGSGALIKNTGNQLIVTLPEAIT---FDIDSSEVRYSLEDTLIRLS 108 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + L + I GHTD N +LS RA S +L ++ VS RI G Sbjct: 109 KSLNKYPKTNVEIIGHTDNV---GGQDYNQKLSTRRAESVSSILAQNDVSRSRIKAY-GR 164 Query: 316 AHHRLKIASDP--MNSANRRIDILVE 339 ++++ ++NRR++I++ Sbjct: 165 GEIEPMMSNNSSKGRASNRRVEIMIT 190 >gi|229589734|ref|YP_002871853.1| hypothetical protein PFLU2242 [Pseudomonas fluorescens SBW25] gi|229361600|emb|CAY48478.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 295 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + LP++ ++++ ++L ++I G+TD + N LS DRA + Sbjct: 193 FATDQTRILPDSQPQIEQLSQLLKQDASLKLAINGYTDRT---GDPAHNKTLSYDRAKAV 249 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + G+ R+S GF + + NRR++++ Sbjct: 250 VAAITAKGIDAARLSAA-GFGDADPVADNVTEAGKAQNRRVELV 292 >gi|168243859|ref|ZP_02668791.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|198244081|ref|YP_002215003.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197938597|gb|ACH75930.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205337186|gb|EDZ23950.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|312912061|dbj|BAJ36035.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323129338|gb|ADX16768.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326627270|gb|EGE33613.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 369 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 241 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 297 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 298 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 356 Query: 338 VED 340 V+ Sbjct: 357 VKG 359 >gi|89890649|ref|ZP_01202159.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] gi|89517564|gb|EAS20221.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] Length = 663 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 91/289 (31%), Gaps = 14/289 (4%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 NP G + + G + + D ++ + + Sbjct: 371 LDIFASSINPDGTLSLPINIGKPANTEDDDFAFIINDDTNMGYFSSNRPGGQGDDDIYRF 430 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 Q + L++ + ++ + + +++ + K ++ L Sbjct: 431 VQLEDLKDACEIILTGTVTDEKTGLPMNQATVMVMDANNNTVDQLVTKTNGKYVFKLECG 490 Query: 182 KILAMKRKKRLQDLAKKI--SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 K ++ +K + + + T S + + I+ + FD Sbjct: 491 KQYFVRTQKENYSSDEDLFTTPTQSDFLDVPLAMVNKKIPIVDCDDIAPLLNIKDIYFDF 550 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 P+ + L KI + + IR HTD+ N LS RA S + Sbjct: 551 DRFNIRPDAALELSKILAFMELYPQTSVEIRSHTDSR---APDAYNDVLSEKRAQSTRKW 607 Query: 299 LMKSGVSEDRISKISGFAHHRLKI--ASD-----PMNSANRRIDILVED 340 L++ G+S R++ G+ +L ++ + NRR + +V Sbjct: 608 LIEKGISASRLTA-KGYGERQLVNNCSNGVDCTPEEHQLNRRSEFIVTG 655 >gi|59711130|ref|YP_203906.1| outer membrane protein [Vibrio fischeri ES114] gi|59479231|gb|AAW85018.1| outer membrane protein [Vibrio fischeri ES114] Length = 219 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 6/105 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F+ + +LQ + E L + + + GHTD + N L L R+ Sbjct: 111 RVLFNFDQYSLTERSKYILQSVTEKLETQKDTVLLNGHTDN---KGRENYNINLGLARSN 167 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 S L+ G S++++ S F + + + NRR+DI Sbjct: 168 SVKAFLLAQGASKEQLESYS-FGEQQPIDDNTTLEGQHHNRRVDI 211 >gi|332279861|ref|ZP_08392274.1| outer membrane protein A [Shigella sp. D9] gi|332102213|gb|EGJ05559.1| outer membrane protein A [Shigella sp. D9] Length = 374 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 246 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 302 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 303 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 361 Query: 338 VED 340 V+ Sbjct: 362 VKG 364 >gi|315179972|gb|ADT86886.1| hypothetical outer membrane protein [Vibrio furnissii NCTC 11218] Length = 176 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 7/156 (4%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + + LQD + + ++ + ++ +F S Sbjct: 2 EAPQANQIADLQDDDSDGVVNARDICPGTPSGAEIDNDGCGEVIRNSARRQLHILFANDS 61 Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 P +Q + E L I I+G+T N LS RA + + L+ Sbjct: 62 YEINPVFADQIQAMAEFLKTYQSASIEIQGYTSKV---GTNEYNQELSQKRAEAVERKLL 118 Query: 301 KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334 G+S R+ +I GF RL D ++ NRR+ Sbjct: 119 SYGISPKRV-RIIGFGETRLLDDGDTNSAHAVNRRV 153 >gi|331662369|ref|ZP_08363292.1| outer membrane protein A [Escherichia coli TA143] gi|331682461|ref|ZP_08383080.1| outer membrane protein A [Escherichia coli H299] gi|331060791|gb|EGI32755.1| outer membrane protein A [Escherichia coli TA143] gi|331080092|gb|EGI51271.1| outer membrane protein A [Escherichia coli H299] Length = 346 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|293409335|ref|ZP_06652911.1| outer membrane protein A [Escherichia coli B354] gi|291469803|gb|EFF12287.1| outer membrane protein A [Escherichia coli B354] Length = 350 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 222 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|284920801|emb|CBG33864.1| outer membrane protein A [Escherichia coli 042] Length = 350 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 222 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 279 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|218704380|ref|YP_002411899.1| outer membrane protein A [Escherichia coli UMN026] gi|293404256|ref|ZP_06648250.1| outer membrane protein A [Escherichia coli FVEC1412] gi|298380040|ref|ZP_06989645.1| outer membrane protein A [Escherichia coli FVEC1302] gi|51235574|gb|AAT98588.1| outer membrane protein A [Escherichia coli] gi|218431477|emb|CAR12355.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli UMN026] gi|291428842|gb|EFF01867.1| outer membrane protein A [Escherichia coli FVEC1412] gi|298279738|gb|EFI21246.1| outer membrane protein A [Escherichia coli FVEC1302] Length = 346 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|330820825|ref|YP_004349687.1| OmpA/MotB [Burkholderia gladioli BSR3] gi|327372820|gb|AEA64175.1| OmpA/MotB [Burkholderia gladioli BSR3] Length = 228 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 S +++++ K + L+G +A R ++ I + Sbjct: 43 EASSRLADEVRQRQVETQRRKTLEQALAGPLAAG----------RVTLVDGRIGIAGNVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSL 289 F +S PE +L+ + L +++ + G D R DNW LS Sbjct: 93 FAVNSDQLQPEGRDLLRSLAGPLTAYLHDRDQILMVSGFADDQLVRAGNRRFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 +RA + + + SGV + + F + ++ + + NRR++I Sbjct: 153 ERALTVTRAFIDSGVPAASVFAAA-FGSEQPVSSNADEAGRARNRRVEI 200 >gi|219685751|ref|ZP_03540562.1| flagellar motor apparatus [Borrelia garinii Far04] gi|219672690|gb|EED29718.1| flagellar motor apparatus [Borrelia garinii Far04] Length = 260 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 60/162 (37%), Gaps = 16/162 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248 Q + ++ + K ++ GI+IS+ FD +S+ ++ Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIMVRQEERGIVISLAAD---AFFDSASADVKLEDNRDS 147 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302 I + VL+ I GHTD + + NW LS R+ + L +S Sbjct: 148 IQKIASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQS 207 Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 V + ++SGF R D NRRIDIL+ Sbjct: 208 NVKSIENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 17/39 (43%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57 + + + Y D +T+L+ FF+ M+ +N Sbjct: 4 RIKKPSKCDEGSPDYMLTYGDMVTLLLVFFVTMFSLNDI 42 >gi|219684669|ref|ZP_03539612.1| flagellar motor apparatus [Borrelia garinii PBr] gi|219672031|gb|EED29085.1| flagellar motor apparatus [Borrelia garinii PBr] Length = 260 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 60/162 (37%), Gaps = 16/162 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248 Q + ++ + K ++ GI+IS+ FD +S+ ++ Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIMVRQEERGIVISLAAD---AFFDSASADVKLEDNRDS 147 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302 I + VL+ I GHTD + + NW LS R+ + L +S Sbjct: 148 IQKIASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQS 207 Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 V + ++SGF R D NRRIDIL+ Sbjct: 208 NVKSIENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 17/39 (43%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57 + + + Y D +T+L+ FF+ M+ +N Sbjct: 4 RVKKPSKCDEGSPDYMLTYGDMVTLLLVFFVTMFSLNDI 42 >gi|157146352|ref|YP_001453671.1| outer membrane protein A [Citrobacter koseri ATCC BAA-895] gi|157083557|gb|ABV13235.1| hypothetical protein CKO_02111 [Citrobacter koseri ATCC BAA-895] Length = 356 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 228 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 284 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ D+IS G + +A +RR++I Sbjct: 285 EKRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 343 Query: 338 VED 340 V+ Sbjct: 344 VKG 346 >gi|193213735|ref|YP_001994934.1| OmpA/MotB domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193087212|gb|ACF12487.1| OmpA/MotB domain protein [Chloroherpeton thalassium ATCC 35110] Length = 264 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + + +L ++ E L + I GHTD+ + +R N+ LS+ RA + Sbjct: 160 FPVNRTELPYSAHDMLDELAEKLLAKRLSVEIVGHTDS---KGSSRFNYNLSVQRAAAVK 216 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + L++ GV + + G + + NRRI++ V Sbjct: 217 KYLIRRGVPASWL-RAYGVGSNEPITRNKTKEGREKNRRIEVKV 259 >gi|158536385|gb|ABW72717.1| outer membrane protein A [Escherichia coli] gi|158536387|gb|ABW72718.1| outer membrane protein A [Escherichia coli] gi|158536389|gb|ABW72719.1| outer membrane protein A [Escherichia coli] gi|158536393|gb|ABW72721.1| outer membrane protein A [Escherichia coli] gi|158536399|gb|ABW72724.1| outer membrane protein A [Escherichia coli] gi|158536401|gb|ABW72725.1| outer membrane protein A [Escherichia coli] Length = 358 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|119357876|ref|YP_912520.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119355225|gb|ABL66096.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266] Length = 337 Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 8/127 (6%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD 273 V + I + FD + S P + L +I +++ + + GHTD Sbjct: 213 VSADQMTQAITSTGRVSLYGIYFDTNKSDIKPASSPALVEIAKLMKSQPALKLHVVGHTD 272 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSA 330 N LS RA + L++ G++ R+ +G A+ + + Sbjct: 273 NV---GGYEFNMGLSKRRADAVVASLVRNHGIAPARL-AANGVAYLAPVAPNTTEAGRAK 328 Query: 331 NRRIDIL 337 NRR++++ Sbjct: 329 NRRVELV 335 >gi|307718829|ref|YP_003874361.1| OmpA family protein [Spirochaeta thermophila DSM 6192] gi|306532554|gb|ADN02088.1| OmpA family protein [Spirochaeta thermophila DSM 6192] Length = 414 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++ LP L + E L + + GHT R LS RA + Sbjct: 311 FLPDQAVLLPGEEEKLDLLAEALNAIPDRTILVVGHTADV---GKPRGQMALSEARAKTI 367 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + L+K GV +R+ + G +D NRR++I V + Sbjct: 368 VEELVKRGVKPERLIYL-GKGGTEPVAPNDTEEGRRLNRRVEIFVLED 414 >gi|254489059|ref|ZP_05102263.1| type IV / VI secretion system protein, DotU family [Roseobacter sp. GAI101] gi|214042067|gb|EEB82706.1| type IV / VI secretion system protein, DotU family [Roseobacter sp. GAI101] Length = 478 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 9/149 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 ++ L + I + + + F + +++ E+ ++ +I Sbjct: 333 QVDRVRDQLADEIAAGLTTVSEEGDFIAVRLGEALQ---FGEGAAVLASESP-IIARIAT 388 Query: 258 VLAHSTEVISIRGHTDASPFRNIARD--NWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL + I + GH+D P R N LS RA + VL + DR+ + G Sbjct: 389 VLENEPGSIIVEGHSDNIPLSGRGRYKTNEELSAARAAAVSDVLAQYMSDPDRM-TVEGA 447 Query: 316 AHHRLKIASDPMNS--ANRRIDILVEDRQ 342 + + +D + NRR+DIL+ Q Sbjct: 448 GASKPLVRADTPEARSRNRRVDILLLKEQ 476 >gi|124004728|ref|ZP_01689572.1| OmpA family protein [Microscilla marina ATCC 23134] gi|123989851|gb|EAY29380.1| OmpA family protein [Microscilla marina ATCC 23134] Length = 513 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + F S ++ +L + + + E I + GHT N RLS Sbjct: 397 EDGAFRFKLGSDELDEKSKALLDSVAQKMMEFPEAEIEVSGHTCNI---GTKAGNLRLSK 453 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRI 334 RA + + LM+ G+ RI G+A +R + ++P NRR+ Sbjct: 454 KRAEAVRKYLMEYDGIDPKRIKTA-GYADNRPLVPNVNEPNRKKNRRV 500 >gi|120554618|ref|YP_958969.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8] gi|120324467|gb|ABM18782.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8] Length = 189 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289 T FD +S P+ VL LA + + + + GH D N L Sbjct: 82 DITTFYFDFDTSEIKPDARDVLVAHARYLADNPRQQVRLEGHADER---GTKEYNLALGE 138 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + + L+ +G S +I +S + + + +++ + NRR++++ Sbjct: 139 RRANAVQRFLIVNGASRGQIETVS-YGEEKPAVRGSTESAWAQNRRVELV 187 >gi|213161917|ref|ZP_03347627.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425902|ref|ZP_03358652.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213622699|ref|ZP_03375482.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|289826790|ref|ZP_06545725.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 369 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 241 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 297 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 298 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 356 Query: 338 VED 340 V+ Sbjct: 357 VKG 359 >gi|57505318|ref|ZP_00371247.1| omp18 [Campylobacter upsaliensis RM3195] gi|315639283|ref|ZP_07894445.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter upsaliensis JV21] gi|57016454|gb|EAL53239.1| omp18 [Campylobacter upsaliensis RM3195] gi|315480609|gb|EFU71251.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter upsaliensis JV21] Length = 165 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 38/118 (32%), Gaps = 8/118 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDN 284 + D FD + V+ + S I++ G+ D N Sbjct: 52 QLNDTLGKVYFDFDKFNIRSDMQSVVSTNANIFNTEVSGTSITVEGNCDEW---GTDEYN 108 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 L L RA + L+ GV+ DRI + + ++ NRR + + Sbjct: 109 QALGLKRAKAVKDALISQGVNSDRI-SVKSYGETNPVCTEKTKTCDAQNRRAEFKLAR 165 >gi|220921336|ref|YP_002496637.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219945942|gb|ACL56334.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060] Length = 178 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 8/102 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ +S P L + + L + + GHTDA N LS RA Sbjct: 76 FEYNSDALTPAAKQNLDEFAKALQDARLRSASFVVEGHTDAR---GGEEFNLGLSTRRAD 132 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + L GV + +++ GF R DP++ ANRR++ Sbjct: 133 AVVKYLSGRGVPQGQLTA-RGFGKSRPL-TDDPLDPANRRVE 172 >gi|158604954|gb|EAT98065.3| OmpA/MotB [Campylobacter concisus 13826] Length = 259 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 74/178 (41%), Gaps = 11/178 (6%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + K +K Q+ ++ L+ + + E + G + Sbjct: 64 ARPDSQVEKETDPESRRTPKPKAQKGAQNEVTSTVKKINELLTASGAPEITMEESEDGFI 123 Query: 226 ISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTE--VISIRGHTDASPFR--NI 280 + + +FDK S+ + + L++IG ++A I G+TD + +I Sbjct: 124 VRLPAAM---LFDKDSAEISGEDAKLFLKRIGMIIAKMPNEVKTDIIGYTDNTNPSKDSI 180 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++NW+LS RA S + L+ GV ++R+ SG A ++ + N R++I Sbjct: 181 YKNNWQLSTARALSVLEELVSDGVPQERLIT-SGRASFDPIASNSTDEGRAKNNRVEI 237 >gi|218548466|ref|YP_002382257.1| outer membrane protein A [Escherichia fergusonii ATCC 35469] gi|218356007|emb|CAQ88623.1| outer membrane protein A (3a;II*;G;d) [Escherichia fergusonii ATCC 35469] Length = 375 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 247 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 303 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 304 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 362 Query: 338 VED 340 V+ Sbjct: 363 VKG 365 >gi|161614736|ref|YP_001588701.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168821824|ref|ZP_02833824.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|238911107|ref|ZP_04654944.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|161364100|gb|ABX67868.1| hypothetical protein SPAB_02488 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205341689|gb|EDZ28453.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320085284|emb|CBY95068.1| Outer membrane protein A Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 369 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 241 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 297 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 298 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 356 Query: 338 VED 340 V+ Sbjct: 357 VKG 359 >gi|311746921|ref|ZP_07720706.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1] gi|126578612|gb|EAZ82776.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1] Length = 562 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 58/306 (18%), Positives = 104/306 (33%), Gaps = 29/306 (9%) Query: 37 YADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96 +AD MT + I Q F+ ++ K + D N + + Sbjct: 280 FADLMT-----------FSTKVPLE---IPQEFSTAPPAILPPKKALADVSNNKSSNEEV 325 Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 + K+S+ S Q +Q + E+ L D + Sbjct: 326 TLAPI----YPKSSIGKPEVSMEQIQQMAEAKPVAEVTEAQTPEENPVEWLVLDGKNSTR 381 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 L N+ + + A L+ + + K V+ Sbjct: 382 LDYEMKFFNGKNEVIFEDSSAYTLSFLKESNVNLIKVKSAGFFPKELTLKDINPLDKTVV 441 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVI-SIRGHTDA 274 T + +++ N F + ++ ET VL ++ E L+ ++ V I GHTD Sbjct: 442 LMTKLESGSVLLLENVN---FKRGTAELEGEETEAVLSELAEFLSENSSVKLRINGHTD- 497 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 N LSLDRA S L+ GV+ + + +I+G+ R ++ S NR Sbjct: 498 --GGGDPSLNKGLSLDRARSVRDYLVDHGVTFENL-RIAGWGGTRPIASNATESGRSKNR 554 Query: 333 RIDILV 338 R+++ V Sbjct: 555 RVELEV 560 >gi|54309669|ref|YP_130689.1| outer membrane protein [Photobacterium profundum SS9] gi|46914107|emb|CAG20887.1| conserved hypothetical outer membrane protein [Photobacterium profundum SS9] Length = 220 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S PE+ VL+ I L +S + +S+ GHTD+ N+ L L RA Sbjct: 118 RVYFAFDSQRLTPESQTVLKAIARKLTNSQQTVSLAGHTDSV---GSQGYNYTLGLQRAK 174 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 S+ Q L+ + V + + + + + ++ + NRR+D++ Sbjct: 175 SSMQYLIDNEVKDTNLKSKT-YGETQPIESNTTSQGRAMNRRVDVV 219 >gi|126173146|ref|YP_001049295.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155] gi|125996351|gb|ABN60426.1| OmpA/MotB domain protein [Shewanella baltica OS155] Length = 485 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 8/111 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S LPE+ VL+ + L + HTD + N LS RA + Sbjct: 378 LFDYDSERMLPESKPVLEVLASYLKQHPTLSFYVVEHTDD---KGERSYNQSLSERRAAA 434 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + L + +++ G + ++ NRR+++++ + Sbjct: 435 VIKQLSDGFQIPSAQLTA-HGNGEYSPVASNTNDAGQKLNRRVELVLRSDK 484 >gi|296282963|ref|ZP_06860961.1| outer membrane protein [Citromicrobium bathyomarinum JL354] Length = 214 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 10/149 (6%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L + + L GV E I ++ + F +S+ P L Sbjct: 58 LGDQFDDQIRELDEQTAGSGVDVEEIGDQDAI-LVRLPDGVTFATNSANINPSFQRTLDT 116 Query: 255 IGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + + + I + G TD + N +LS RA + L+ GVS RI Sbjct: 117 VAQSMIRYPNSLIDVYGFTDTT---GSPSYNQQLSEQRAQAVANYLVSQGVSRARI-ATR 172 Query: 314 GFAHH----RLKIASDPMNSANRRIDILV 338 G+ R++ + NRR++I + Sbjct: 173 GYGEDPQYLRVRTGDNVNEPLNRRVEIKI 201 >gi|285019182|ref|YP_003376893.1| pal family outer membrane lipoprotein [Xanthomonas albilineans GPE PC73] gi|283474400|emb|CBA16901.1| probable pal family outer membrane lipoprotein [Xanthomonas albilineans] Length = 172 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD PE ++ + L I+++G+TD N L Sbjct: 63 RQRVVYFDLDKDTVKPEFQAIMACHAKYLRDRPSSRITLQGNTDER---GSREYNMGLGE 119 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337 RA S + L +G S ++ + F +++ S NRR++I+ Sbjct: 120 RRANSVFSALQANGGSAAQL-TVVSFGEEHPVCTESNESCWSQNRRVEIV 168 >gi|322418514|ref|YP_004197737.1| OmpA/MotB domain-containing protein [Geobacter sp. M18] gi|320124901|gb|ADW12461.1| OmpA/MotB domain protein [Geobacter sp. M18] Length = 450 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P L ++ + E + I GHTD+ + N LS RA + Sbjct: 344 FLFSSPAVRPIYQAQLAAFAALMKANEESSALIEGHTDSV---GDRQSNLNLSQQRAQNV 400 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 L+K GV+ ++ I G+ + + ++ NRR + + Sbjct: 401 KNELLKHGVAPAKV-AIKGYGFSKPRASNKTNVGRQKNRRAVVTLT 445 >gi|254429703|ref|ZP_05043410.1| OmpA family protein [Alcanivorax sp. DG881] gi|196195872|gb|EDX90831.1| OmpA family protein [Alcanivorax sp. DG881] Length = 368 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + ++ + + L I + GH D++ A N LS RA S Sbjct: 257 FGFDRDTIQGQFSDEIKGVADRLNAGEQGRIRVEGHADST---GPADYNQGLSERRAQSV 313 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 LMK V D+I+ GF + + + NRR DI+VE + Sbjct: 314 KDRLMKDFSVGADKITT-EGFGESKPVADNSTADGRAKNRRADIIVETEE 362 >gi|220925333|ref|YP_002500635.1| peptidoglycan-associated lipoprotein [Methylobacterium nodulans ORS 2060] gi|219949940|gb|ACL60332.1| peptidoglycan-associated lipoprotein [Methylobacterium nodulans ORS 2060] Length = 172 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 + F+ S+ P L K + L+ I GH D N+ L R Sbjct: 62 DRVFFETDSTDLTPTATATLDKQAQWLSRYPHYTFLIEGHADER---GTREYNFSLGARR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRRIDILVED 340 A + L G++ R+ +S + R +D S NRR +++ Sbjct: 119 AQTVRDYLASRGIAGSRMRTVS-YGKERPVAVCNDISCWSQNRRAVTVLDG 168 >gi|71066157|ref|YP_264884.1| outer membrane protein OprF [Psychrobacter arcticus 273-4] gi|71039142|gb|AAZ19450.1| outer membrane protein OprF, OmpA/OmpF family [Psychrobacter arcticus 273-4] Length = 240 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 49/115 (42%), Gaps = 8/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD ++ + VL+ + + ++ +++ GHTD + + +LS Sbjct: 129 QFNVLFDFDNAGIKSKHSAVLRGMTNFIQAYPQIAVTLEGHTDN---KGPESYHLKLSES 185 Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 R +L+ K GV R+S + G+ +++ NRR+ +V R Sbjct: 186 RVNMVKNILVDKYGVDAMRLSTV-GYGETMPVDSNNTEKGRQNNRRVVAIVSQRN 239 >gi|327334842|gb|EGE76553.1| putative outer membrane protein A [Propionibacterium acnes HL097PA1] Length = 368 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287 D + +FD S + P ++ + + L + I + G+TD+ A N L Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313 Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 S RA S +VL + G++ +G ++D NRR+ I V++ Sbjct: 314 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVASNDSEAGRRLNRRVTITVKE 367 >gi|194450606|ref|YP_002045072.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197265555|ref|ZP_03165629.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|194408910|gb|ACF69129.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197243810|gb|EDY26430.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|321223685|gb|EFX48748.1| Outer membrane protein A precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|326622756|gb|EGE29101.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 358 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 230 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 287 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|99080684|ref|YP_612838.1| OmpA/MotB [Ruegeria sp. TM1040] gi|99036964|gb|ABF63576.1| OmpA/MotB [Ruegeria sp. TM1040] Length = 1619 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 10/106 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + + VL++ + L V I GHTD++ + N LS RA Sbjct: 467 FATGKADIREAGLGVLREAADALKARGAENYVFLIEGHTDST---GSDKINLPLSDARAK 523 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 S + +++ G++ +R+ + G+ + NRR++I Sbjct: 524 SVERYFVENAGIAPERLQTV-GYGPRIPLATNATEGGKQINRRVEI 568 >gi|323495647|ref|ZP_08100718.1| outer membrane protein [Vibrio sinaloensis DSM 21326] gi|323319282|gb|EGA72222.1| outer membrane protein [Vibrio sinaloensis DSM 21326] Length = 211 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 6/105 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ S ++ VL ++ ++ I + GHTD A N+ L L R+ Sbjct: 108 RVYFNFDDSTLTQQSEYVLTRVMRLIESQARNIELAGHTDNV---GDAGYNFSLGLRRSK 164 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 + L++ GV RI+ S F ++ + + D NRR+++ Sbjct: 165 AVEDYLVERGVDTKRITTTS-FGENKPFVDNMSDENRKLNRRVEV 208 >gi|134094293|ref|YP_001099368.1| putative outer membrane protein; putative peptidoglycan-associated (lipo)-protein [Herminiimonas arsenicoxydans] gi|133738196|emb|CAL61241.1| conserved hypothetical protein; putative OmpA domain [Herminiimonas arsenicoxydans] Length = 225 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D + F S +L + L + ++I GHTD++ N LS Sbjct: 103 DIPSDISFATGRSDINSSFRPILDRFATGLVDNPAATVTIIGHTDST---GSDAINNPLS 159 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338 DRA L GV+ RI + G + ++ + NRR++I V Sbjct: 160 FDRASRTRDYLAGRGVAPQRIH-VDGRGSREPVASNANEAGRARNRRVEIYV 210 >gi|326336319|ref|ZP_08202490.1| outer membrane protein A [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691493|gb|EGD33461.1| outer membrane protein A [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 666 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 73/199 (36%), Gaps = 14/199 (7%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 DSE+ + + K+ D + + ++ + + A K + + I Sbjct: 473 DSEQKEIIHKTNDTNGNFDFGKSQVNCDDTFVFVRAQKENYAVVEEQINIREKGEIHKEI 532 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-I 268 + T + FD S + V L KI EV+ + I Sbjct: 533 FLKSIKKNVTVGDDLAKFFG--IEIIYFDFDKSNIRSDAEVDLAKIVEVMKEHPNIKIAI 590 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASD- 325 + HTD+ + N LS RA S + ++K G++ R++ G+ +L ++D Sbjct: 591 KSHTDSR---GSDQYNLALSDRRAKSTLEWIVKQGITRSRLTA-KGYGETQLVNGCSNDV 646 Query: 326 ----PMNSANRRIDILVED 340 + NRR + ++ + Sbjct: 647 PCTEEEHQKNRRSEFIITE 665 >gi|300824154|ref|ZP_07104273.1| outer membrane protein A [Escherichia coli MS 119-7] gi|300925361|ref|ZP_07141248.1| outer membrane protein A [Escherichia coli MS 182-1] gi|301327213|ref|ZP_07220475.1| outer membrane protein A [Escherichia coli MS 78-1] gi|309795053|ref|ZP_07689473.1| outer membrane protein A [Escherichia coli MS 145-7] gi|300418528|gb|EFK01839.1| outer membrane protein A [Escherichia coli MS 182-1] gi|300523330|gb|EFK44399.1| outer membrane protein A [Escherichia coli MS 119-7] gi|300846194|gb|EFK73954.1| outer membrane protein A [Escherichia coli MS 78-1] gi|308121357|gb|EFO58619.1| outer membrane protein A [Escherichia coli MS 145-7] Length = 358 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|300921002|ref|ZP_07137390.1| outer membrane protein A [Escherichia coli MS 115-1] gi|300412048|gb|EFJ95358.1| outer membrane protein A [Escherichia coli MS 115-1] Length = 358 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|256018784|ref|ZP_05432649.1| outer membrane protein A [Shigella sp. D9] Length = 369 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 241 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 297 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 298 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 356 Query: 338 VED 340 V+ Sbjct: 357 VKG 359 >gi|254446248|ref|ZP_05059724.1| hypothetical protein VDG1235_4498 [Verrucomicrobiae bacterium DG1235] gi|198260556|gb|EDY84864.1| hypothetical protein VDG1235_4498 [Verrucomicrobiae bacterium DG1235] Length = 260 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 70/189 (37%), Gaps = 1/189 (0%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + ++ E + + K L ++A++ L+ A+ Sbjct: 48 QDPYNTPMDNSMGVIESPTEGQPSSANGQAKGKAEISDFKVLYEMAQEFMRLLNIDSANP 107 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 K V + T G+ +++ D+ P F ++S+ P V++ + ++ ++ + G Sbjct: 108 DQKPVDLDVTSDGLRVTLYDRDAHPFFVENSADYTPWGSFVIETLAWLVQRHNFMVRVDG 167 Query: 271 HTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 + W LS DRA S ++L + GV + ++ + P Sbjct: 168 YVSEGFEGDGWEYTAWELSSDRANSTRRLLERYGVRRGQFKSVTSHGNMEPLPFMHPTAE 227 Query: 330 ANRRIDILV 338 AN R+ I + Sbjct: 228 ANDRVSISL 236 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Query: 28 NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQ 87 ++ G+WK+ YADF+T +MA F+V+W+ + D+ K+ + +YF M S G+ + Sbjct: 7 HHGGAWKVAYADFVTAMMALFMVLWLTSQ-DESLKRDLAKYFQDPYNTPMDNSMGVIESP 65 Query: 88 NPPERSSQNKIDLSIDE 104 + SS N E Sbjct: 66 TEGQPSSANGQAKGKAE 82 >gi|225552270|ref|ZP_03773210.1| flagellar motor apparatus [Borrelia sp. SV1] gi|225371268|gb|EEH00698.1| flagellar motor apparatus [Borrelia sp. SV1] Length = 260 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 61/164 (37%), Gaps = 20/164 (12%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248 Q + ++ + K ++ GI+IS+ FD +S+ ++ Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIVVRQEERGIVISLAAD---AFFDSASADVKLEENRDS 147 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302 I + L+ I GHTD + + NW LS+ R+ + L +S Sbjct: 148 IQKIASFIGFLSPRGYNFKIEGHTDNIDTDINGPWKSNWELSVARSVNMLEHILNYLDQS 207 Query: 303 GVSEDRI---SKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 V RI ++SGF R D NRRIDIL+ Sbjct: 208 DV--KRIENSFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 17/39 (43%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57 + + + Y D +T+L+ FF+ M+ +N Sbjct: 4 RIKKPSKCDEGSPDYMLTYGDMVTLLLVFFVTMFSLNDI 42 >gi|120612058|ref|YP_971736.1| OmpA domain-containing protein [Acidovorax citrulli AAC00-1] gi|120590522|gb|ABM33962.1| OmpA domain protein [Acidovorax citrulli AAC00-1] Length = 181 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 7/107 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 FD S + PE ++++ + S I GHTD N L R Sbjct: 76 RIVYFDFDSYVVKPEYQSLIEQHARFIKASQGRKVMIEGHTDDR---GGREYNLALGQKR 132 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 A + + L GV E ++ +S F + + + ++ NRR+++ Sbjct: 133 AEAVRRALGLLGVPEAQMEAVS-FGKEKPAVQGNTEDAFSQNRRVEL 178 >gi|262403880|ref|ZP_06080438.1| outer membrane protein [Vibrio sp. RC586] gi|262350384|gb|EEY99519.1| outer membrane protein [Vibrio sp. RC586] Length = 337 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%) Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDAS 275 + + +++ FD S I + ++ + L + E+ + GHTD+ Sbjct: 217 TYEPQKLLAVTLDSSDIHFDFDSSEIILTRSLSKKISQVIKFLFDNPEIKIEVIGHTDSV 276 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRR 333 N LS RA S Q+++ GVS +RI+ I G + + NRR Sbjct: 277 ---GSQEYNLVLSKQRATSIAQLIIDGGVSINRIN-IIGKGEDEPITTNSHAMGRAQNRR 332 Query: 334 IDI 336 ++I Sbjct: 333 VEI 335 >gi|332524171|ref|ZP_08400398.1| outer membrane protein, ompa family [Rubrivivax benzoatilyticus JA2] gi|332107507|gb|EGJ08731.1| outer membrane protein, ompa family [Rubrivivax benzoatilyticus JA2] Length = 178 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLS 288 D +F+ + P I L ++G LA + + + GHTD A N LS Sbjct: 68 DLSMALLFEFDADRLAPLQIERLGRLGRELAEAGIHRMHVEGHTDNV---GAASYNQALS 124 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 L RA S + L +G + ++ G R ++ + NRR+ ++V Sbjct: 125 LRRAASVARALSGAGFDAAGL-QVRGLGAARPIADNTNEAGRARNRRVTLIVVAD 178 >gi|156976121|ref|YP_001447027.1| hypothetical protein VIBHAR_04892 [Vibrio harveyi ATCC BAA-1116] gi|156527715|gb|ABU72800.1| hypothetical protein VIBHAR_04892 [Vibrio harveyi ATCC BAA-1116] Length = 321 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 6/76 (7%) Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + I G++D + N +L+ RA + + G++ DR+ + G ++ Sbjct: 238 QVEINGYSDTT---GSEAYNQQLTEKRAQAVAEHFQAEGIAADRM-TVKGMGEANPVASN 293 Query: 325 DPMNSA--NRRIDILV 338 + NRR++++V Sbjct: 294 ETREGREENRRVEVVV 309 >gi|308047841|ref|YP_003911407.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] gi|307630031|gb|ADN74333.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] Length = 716 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 12/109 (11%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293 FD S+ L ++ LA + I GHTD+ N LS RA Sbjct: 53 FDTDSATLSQADQQALTQLAAKLAPMLDGQMALAISGHTDS---AGAEEYNLGLSQRRAQ 109 Query: 294 SAYQVLMKSGVSEDRISKISG--FAHHRLKIASDPMN--SANRRIDILV 338 S Q L + ++ +I F + ++D +ANRR++I + Sbjct: 110 SVAQFLTS--LMPEQHIRIESRYFGETQPLQSNDSARGMAANRRVEITL 156 >gi|253702173|ref|YP_003023362.1| peptidoglycan-associated lipoprotein [Geobacter sp. M21] gi|251777023|gb|ACT19604.1| peptidoglycan-associated lipoprotein [Geobacter sp. M21] Length = 200 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 7/175 (4%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + EE + + A + + A + T + + V + TG Sbjct: 28 VRTEEPISAAQSAPTQAPATQARPEADSGAAQQPITETTPSREQAVTQETAKEAGTGATQ 87 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 + + F+ ++ E L K E L+ + I G+ D N Sbjct: 88 EVQAELQKVYFNFDAADLSEEARGSLSKNAEYLSRQAGIKVRIEGNCDER---GSDDYNM 144 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338 L RA +A L+ G++ DR+S IS + + + + NRR + ++ Sbjct: 145 ALGERRAKAARDYLVNLGIASDRLSTIS-YGEEKPADPGHDEAAWAKNRRAEFVI 198 >gi|147886295|gb|ABQ52380.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Dublin] Length = 229 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 101 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 157 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 158 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 216 Query: 338 VED 340 V+ Sbjct: 217 VKG 219 >gi|297620366|ref|YP_003708503.1| Sodium-type flagellar protein motY precursor [Waddlia chondrophila WSU 86-1044] gi|297375667|gb|ADI37497.1| Sodium-type flagellar protein motY precursor [Waddlia chondrophila WSU 86-1044] Length = 248 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 L + + + + ++ + F R + + + Q Sbjct: 82 LEFEAFPDQDYGRDVALAEPRYHPQKQRIEPGMSKQLPGIEDFTDPRYDVELRTVFQTVY 141 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 ++ + + H + + GH D N L R+ S Sbjct: 142 FPYNSGLIKGKGNMDRLRTIAAYMQKHPDTYLFVEGHCDER---GAEAYNLALGAKRSNS 198 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338 ++L+K GV +RI +S + R + ++ S NRR + + Sbjct: 199 VRELLIKEGVRPERIFTVS-YGKERPADSGHNEESWSKNRRAEFKI 243 >gi|298291600|ref|YP_003693539.1| OmpA/MotB domain protein [Starkeya novella DSM 506] gi|296928111|gb|ADH88920.1| OmpA/MotB domain protein [Starkeya novella DSM 506] Length = 336 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + PE+ + ++ +L + + + I GHTD N LS RA + Sbjct: 229 FDFDKADIKPESEAQIAQLASLLKSNPQLGVLIVGHTD---GHGAFDYNLSLSQRRAQAV 285 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L G++ +R + +G ++ + NRR++I+ Sbjct: 286 ANRLTSQHGIAANR-TTPAGAGMIAPVASNRTEEGRAKNRRVEIV 329 >gi|257454195|ref|ZP_05619465.1| outer membrane protein, OmpA/MotB family [Enhydrobacter aerosaccus SK60] gi|257448368|gb|EEV23341.1| outer membrane protein, OmpA/MotB family [Enhydrobacter aerosaccus SK60] Length = 172 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 7/123 (5%) Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275 T T ++ + NT F SS + VL + + L + ++I GHTD Sbjct: 52 VVTNSTSVITAAGANPNTVYFGFDSSEIDAQGQAVLNQQAQFLQANPSARVAIAGHTDER 111 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333 N L RA +A L SGVS R+ IS + + + + NRR Sbjct: 112 ---GSREYNLALGERRAQAAQAYLATSGVSASRMEAIS-YGEDQPADPGHDESAWAKNRR 167 Query: 334 IDI 336 +I Sbjct: 168 AEI 170 >gi|152966787|ref|YP_001362571.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216] gi|151361304|gb|ABS04307.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216] Length = 471 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 74/236 (31%), Gaps = 11/236 (4%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 T L G + + + + ++ + D E Sbjct: 154 TAGDGVLTEGYSGLGGVRPGETVRLQAAYAAPPAGTPDVAVLLPGTGLVEALAVVDGELP 213 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQ-DLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + A L D A + + A+++ V ET+ G Sbjct: 214 GPTPDLTPDASTGTGTGTAEDGPAPLDPDGAATAAVRPLEVYAEDLQGTVRTETSDAGAR 273 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDN 284 +++ +F S+ PE VL+ +VL +++ GHTD N Sbjct: 274 VALAAD---VLFALDSAELSPEARAVLETAATDVLTRRPGPVAVVGHTDDQ---GADDYN 327 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338 LS RA + VL + D ++ G + S + NRR++++V Sbjct: 328 LDLSRRRAQAVADVL-GPLLGADYPLQVDGRGEAEPAVPGPSTEARARNRRVELVV 382 >gi|330993342|ref|ZP_08317277.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1] gi|329759372|gb|EGG75881.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1] Length = 364 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290 FD + + ++ + + H I + G+TD + P + N LS+ Sbjct: 255 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTAAHPGPRGQQYNLGLSMR 314 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA S L++ GV + I I G+ + + D NRR++I++ Sbjct: 315 RAESVKAELIRDGVPANAID-IHGYGEAHPLVPTGPDTREPQNRRVEIIL 363 >gi|294676060|ref|YP_003576675.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB 1003] gi|294474880|gb|ADE84268.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003] Length = 223 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 4/106 (3%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287 D NT F +S L + + E + GHTD N L Sbjct: 64 QDVPNTVNFAFNSDRLDGTAQAALAQQANWIKQFPEVKFRVYGHTD---LVGSDAYNKAL 120 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L RA + L G+S R+ + + + + N+ NRR Sbjct: 121 GLRRARAVVAFLTGQGISRSRLEAVVSYGKTQPLVYDPGPNAQNRR 166 >gi|316932667|ref|YP_004107649.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris DX-1] gi|315600381|gb|ADU42916.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris DX-1] Length = 165 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ S P+ L K + L +I GH D N L R Sbjct: 57 DRVFFESDQSDLSPQAAATLDKQVQWLQTYARYTFTIEGHADER---GTREYNIALGARR 113 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A S L+ G+ R+ IS + R +D S NRR Sbjct: 114 AQSVRNYLVSRGIDASRMRTIS-YGKERPVAVCNDISCWSQNRR 156 >gi|300778373|ref|ZP_07088231.1| inorganic diphosphatase [Chryseobacterium gleum ATCC 35910] gi|300503883|gb|EFK35023.1| inorganic diphosphatase [Chryseobacterium gleum ATCC 35910] Length = 909 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ SS P + L + E+L I + G+TD N LS RA +A Sbjct: 805 FETGSSDLKPGYELQLNTLAEILNAYPNLKIKLGGYTDN---SGNEESNLSLSNLRAQTA 861 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK-IASDPMN--SANRRIDILVED 340 L++ GVS DRI G+ A+D + NRRID+ V Sbjct: 862 KLKLLELGVSADRIEA-EGYGSQHPVCEANDTDECKAKNRRIDVRVLA 908 >gi|213646608|ref|ZP_03376661.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 358 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 230 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 287 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|56697920|ref|YP_168291.1| OmpA family protein [Ruegeria pomeroyi DSS-3] gi|56679657|gb|AAV96323.1| OmpA family protein [Ruegeria pomeroyi DSS-3] Length = 211 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ VL + + E + GHTDA N L + RA + Sbjct: 68 FAFDSAELDATAQQVLTLQADWIRQFPEVRFRVYGHTDAVGSSG---YNKSLGMRRARAV 124 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 G+S R+ + + + + + NRR Sbjct: 125 VSFFASRGISRSRLEAVVSYGETQPLVPTGERERRNRR 162 >gi|254441790|ref|ZP_05055283.1| peptidoglycan-associated lipoprotein, putative [Octadecabacter antarcticus 307] gi|198251868|gb|EDY76183.1| peptidoglycan-associated lipoprotein, putative [Octadecabacter antarcticus 307] Length = 172 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + MF +S E L L+ +++ +++ GH D N L R Sbjct: 62 DRVMFAVDTSTLTAEGRNTLDGQSGWLSTNSDYLAVIEGHADEQ---GTREYNLALGARR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + + L+ G++ RI +S + R + + + NRR Sbjct: 119 ANAVREYLISKGLASSRIRTVS-YGKERPIAVCSEESCYAQNRR 161 >gi|325102858|ref|YP_004272512.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] gi|324971706|gb|ADY50690.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] Length = 141 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + +D P+ V L K+ ++L + I + HTD+ N LS Sbjct: 27 RIENIYYDFDKWNIRPDAAVELDKLVKILKDNPTIWIELGSHTDSR---GKDAYNLNLSQ 83 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--AS-----DPMNSANRRIDILV 338 RA SA ++ G+ ++RI G+ +L ++ + + NRR + + Sbjct: 84 KRAESAVGYIVSRGIDKNRI-AARGYGETQLLNRCSNGVECTEEEHQLNRRTEFKI 138 >gi|291286065|ref|YP_003502881.1| type I secretion outer membrane protein, TolC family [Denitrovibrio acetiphilus DSM 12809] gi|290883225|gb|ADD66925.1| type I secretion outer membrane protein, TolC family [Denitrovibrio acetiphilus DSM 12809] Length = 666 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + +F +SS ++ V+ I L I GHTD+ A N +LS Sbjct: 553 NFSNILFKLNSSKLTKDSYPVVDAIAAKLKTMEGYTLQIVGHTDS---SGNAEFNKKLSA 609 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 +RA S Y L++ GV ++ I+ G ++ + NRRI+ + Sbjct: 610 ERAKSVYNRLVRKGVPKENITTY-GKGEELPLYSNATRDGRVKNRRIEFKLT 660 >gi|194443312|ref|YP_002040273.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|200390100|ref|ZP_03216711.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205357270|ref|ZP_02346426.2| outer membrane protein A [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|194401975|gb|ACF62197.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|199602545|gb|EDZ01091.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205322778|gb|EDZ10617.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 358 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 230 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 287 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|168233443|ref|ZP_02658501.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472870|ref|ZP_03078854.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197248715|ref|YP_002145940.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|194459234|gb|EDX48073.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197212418|gb|ACH49815.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205332492|gb|EDZ19256.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 371 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 243 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 299 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 300 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 358 Query: 338 VED 340 V+ Sbjct: 359 VKG 361 >gi|120555939|ref|YP_960290.1| hypothetical protein Maqu_3029 [Marinobacter aquaeolei VT8] gi|120325788|gb|ABM20103.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8] Length = 217 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 65/168 (38%), Gaps = 19/168 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS+ +++++ + + L + + I IS + Sbjct: 42 ELSQSLAEEIEKREAEEQRRMALEQALEDPLTKGL-----VTFRDGRIGIS-----GNVL 91 Query: 237 FDKSSSIPLPETIVVL----QKIGEVLAHSTEVISIRGHTDASPF--RNIARDNWRLSLD 290 F+ +S E VL + + L E++ + G TD P N +DNW LS Sbjct: 92 FELNSDQLQAEGEEVLESLIRPLQAYLEQHDELLMVSGFTDDLPMHPGNRYQDNWGLSAQ 151 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 RA + + L + G+ DR+ + F H + + + NRR++I Sbjct: 152 RALTVTRTLTELGLPNDRVFAAA-FGPHHPAVPNVDAESRAQNRRVEI 198 >gi|325068010|ref|ZP_08126683.1| OmpA/MotB domain protein [Actinomyces oris K20] Length = 411 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 11/177 (6%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 E+ + + A L + S+ + + T I +++ Sbjct: 55 ESGSAQQANIDLSAAQTELDTLPNTTLAASAPIERYTRS-LDDSTSTHTGGKDITVTLAS 113 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLS 288 F S+ LQ + L ++I GHTD N LS Sbjct: 114 DVT---FASDSADLASGAETQLQTVVGQLGQYPDGGTLTIVGHTDDVQ---DDAYNQTLS 167 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343 RA + L + + + +SG + K +D +ANRR++I + G Sbjct: 168 EKRANAVKTRLEQLTKLDKWQTSVSGKGESQPKINDTTDQARAANRRVEITLTPTSG 224 >gi|269105139|ref|ZP_06157833.1| lipoprotein precursor OmpA family [Photobacterium damselae subsp. damselae CIP 102761] gi|268160589|gb|EEZ39088.1| lipoprotein precursor OmpA family [Photobacterium damselae subsp. damselae CIP 102761] Length = 210 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 56/150 (37%), Gaps = 6/150 (4%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + D+ L ++ FE + I D F+ +S + Sbjct: 62 QIQQYDIVDVDKELLKNILGKMNSGEKCFEYLLSNASIERDDTTARVYFNFDNSKLTSAS 121 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 I +L K+ E + S I GHTD+ N L RA S + + +GV+ + Sbjct: 122 IYILNKLIENVKASKSNYLIEGHTDSV---GTTSYNKDLGYRRAKSVIEFFVGNGVNRSQ 178 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDI 336 + IS + +D S NRR++I Sbjct: 179 LQGIS-EGELKPLETNDTSIGRSYNRRVEI 207 >gi|172062069|ref|YP_001809721.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6] gi|171994586|gb|ACB65505.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 555 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 72/267 (26%), Gaps = 7/267 (2%) Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 A G+ P + + + + ++ L +++ S Sbjct: 288 ARTGLQPRVTKPVAGPLPLPRIHASAPGSAGPAKRHLLPSPVNRREWPLASHVLLSSVVA 347 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + S + + + + + A R Sbjct: 348 TTVAVAISGAVNYRIVERISDDLSAYWNTPAVRITASIDSFERLRAARDEVARNLRDGAP 407 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV-LQKIGE 257 + ++ V T ++ + + +F + P L + Sbjct: 408 FGAGWGLYPGRALLPRVDVALTAYQPPLTTVQIDSLSLFASGKATFSPAHERRELAHVLR 467 Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 ++ + + I GH D+ A N RLS RA + L+ G I G Sbjct: 468 LIRENPDQRVLIEGHADSE---GSADANLRLSEARARAIRDWLVAEGGLSVARFAIQGMG 524 Query: 317 HHRLKIAS--DPMNSANRRIDILVEDR 341 R + + + NRR+D+ + Sbjct: 525 DIRPIADNRSEAGRALNRRVDVSLIPD 551 >gi|332528331|ref|ZP_08404331.1| OmpA/MotB [Hylemonella gracilis ATCC 19624] gi|332042202|gb|EGI78528.1| OmpA/MotB [Hylemonella gracilis ATCC 19624] Length = 186 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 7/105 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S + PE +++ L+ + I GHTD N L RA Sbjct: 83 VYFDYDSYVIKPEFQKLIEAQARYLSSDPALRVVIEGHTDER---GGREYNLALGQRRAE 139 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 + + L GV++ +I +S F + +++ S NRR +I Sbjct: 140 AVRRALSLLGVADTQIDAVS-FGEEKPVSEGSNESAWSQNRRAEI 183 >gi|331672486|ref|ZP_08373276.1| outer membrane protein A [Escherichia coli TA280] gi|331070392|gb|EGI41757.1| outer membrane protein A [Escherichia coli TA280] Length = 370 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 242 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 298 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 299 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 357 Query: 338 VED 340 V+ Sbjct: 358 VKG 360 >gi|307726202|ref|YP_003909415.1| type IV / VI secretion system protein, DotU family [Burkholderia sp. CCGE1003] gi|307586727|gb|ADN60124.1| type IV / VI secretion system protein, DotU family [Burkholderia sp. CCGE1003] Length = 445 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 5/107 (4%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293 +F + P+ I +L+++ L + + GHTD P + +DN+ LS RA Sbjct: 335 ALFPSGGADLAPDEIPLLRRVASALNQVRGRVIVVGHTDDQPVHSLRFKDNFALSTARAQ 394 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI-ASD--PMNSANRRIDIL 337 + VL G+ + R + +G + +D + NRR++IL Sbjct: 395 NTLAVL-AQGLDDPRRLEANGAGSSQPVATPADLPANRARNRRVEIL 440 >gi|326316639|ref|YP_004234311.1| peptidoglycan-associated lipoprotein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373475|gb|ADX45744.1| peptidoglycan-associated lipoprotein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 181 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 7/107 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 FD S + PE ++++ + S I GHTD N L R Sbjct: 76 RIVYFDFDSYVVKPEYQSLIEQHARFIKASQGRKVMIEGHTDDR---GGREYNLALGQKR 132 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 A + + L GV + ++ +S F + + + ++ NRR+++ Sbjct: 133 AEAVRRALGLLGVPDGQMEAVS-FGKEKPAVQGNTEDAFSQNRRVEL 178 >gi|193212309|ref|YP_001998262.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB 8327] gi|193085786|gb|ACF11062.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB 8327] Length = 169 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 FD SS E L++ + + +I+GH D N L R Sbjct: 64 GDIFFDFDSSALSDEAQEQLKQNAAWMEKNPLVNATIQGHCDER---GTDEYNLALGERR 120 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333 A +A + L+ +GVS R++ +S F ++ + NRR Sbjct: 121 ATAAKEYLITAGVSAGRLTAVS-FGEEMPFDPGHNEEAWAKNRR 163 >gi|220918872|ref|YP_002494176.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956726|gb|ACL67110.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 386 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 70/272 (25%), Gaps = 16/272 (5%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P + + G Q P+ D + + + + Sbjct: 125 PDLDDRCPDAPGPSTLQGCPDADGDGIGDAEDACPAEAGPAETLGCPPAKDSDGDGVPDE 184 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 I + + D D + ++ Sbjct: 185 IDRCPLDPEDADGFQEEDGCPDPDDDGDGIVDRVDACPHDQGPLENRGCPVMDADGDGVA 244 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 D VA + I++ + + LP + V Sbjct: 245 DPDDRCP-----EQAGVAADGCPRAYRLLEVGRDRIALREPVRFG----ARDDLLPSSAV 295 Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L ++ + L +++ HTD A + RLS RA + L G+ +R+ Sbjct: 296 LLDELAQALRDRPRLRVAVEVHTD---GAGEAAASKRLSQARAEAVRAALAGRGIEAERV 352 Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVE 339 GF ++ + NRR +I + Sbjct: 353 EA-KGFGAEHPIASNKTARGRAQNRRTEIRIL 383 >gi|308048148|ref|YP_003911714.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] gi|307630338|gb|ADN74640.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] Length = 219 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 10/148 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L GV + I + + N+ FD S I L + Sbjct: 78 HYMDRQEAALREKLAGTGVSVKRDGDHIQLVM---PNSLTFDVGSDRLKMPAINALSGVA 134 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 V++ E I GHTD++ N RLS +RA + L++ +S R+S G Sbjct: 135 MVVSEFDETNLQITGHTDST---GGRDLNMRLSRERAEAVASELLRQSISATRMSTY-GA 190 Query: 316 AHHRLKIASDPM--NSANRRIDILVEDR 341 R ++ + NRR++I++ R Sbjct: 191 GPDRPIASNQSEAGRAENRRVEIVLTPR 218 >gi|298485733|ref|ZP_07003812.1| Outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159759|gb|EFI00801.1| Outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 229 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 10/147 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L A GV + I + + F SS L + L Sbjct: 87 DKQEAALRASMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLANSL 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L V + + + G Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQVVDQSHL-SVRGAGPD 199 Query: 319 RLKIASDP--MNSANRRIDILVEDRQG 343 + ++ + NRR+++ ++ G Sbjct: 200 QPIASNADVNGRAQNRRVEVNLKPIPG 226 >gi|168237123|ref|ZP_02662181.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734413|ref|YP_002114070.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194709915|gb|ACF89136.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289811|gb|EDY29172.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|322616444|gb|EFY13353.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619695|gb|EFY16570.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622609|gb|EFY19454.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629758|gb|EFY26533.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632520|gb|EFY29266.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636985|gb|EFY33688.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641475|gb|EFY38113.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646058|gb|EFY42574.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649640|gb|EFY46071.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654059|gb|EFY50382.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658591|gb|EFY54853.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663448|gb|EFY59650.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670184|gb|EFY66324.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671420|gb|EFY67542.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676776|gb|EFY72843.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682700|gb|EFY78719.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686380|gb|EFY82362.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195127|gb|EFZ80309.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199809|gb|EFZ84898.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202802|gb|EFZ87838.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209073|gb|EFZ94010.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213664|gb|EFZ98452.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217967|gb|EGA02682.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221999|gb|EGA06386.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226572|gb|EGA10777.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229768|gb|EGA13891.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232993|gb|EGA17089.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240728|gb|EGA24770.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243044|gb|EGA27065.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249793|gb|EGA33695.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252735|gb|EGA36573.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259149|gb|EGA42793.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259972|gb|EGA43600.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268028|gb|EGA51507.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269876|gb|EGA53325.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 369 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 241 KSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 297 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 298 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 356 Query: 338 VED 340 V+ Sbjct: 357 VKG 359 >gi|158536383|gb|ABW72716.1| outer membrane protein A [Escherichia coli] Length = 354 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 226 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 282 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 283 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 341 Query: 338 VED 340 V+ Sbjct: 342 VKG 344 >gi|58039713|ref|YP_191677.1| Outer membrane protein [Gluconobacter oxydans 621H] gi|58002127|gb|AAW61021.1| Outer membrane protein [Gluconobacter oxydans 621H] Length = 370 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 7/108 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDAS---PFRNIARDNWRLSLD 290 FD S+ V+ I + G+TD S P N LS Sbjct: 261 VFFDWDSAELSTRAKAVVAAAARNSTSVQVTHIEVSGYTDTSAAHPGHRGEAYNMALSQR 320 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 RA + + L++ GV+ + GF + A++ NRR++I Sbjct: 321 RANTVKEELVRDGVAAG-LITTQGFGESHPLVVTAANTREPQNRRVEI 367 >gi|170693231|ref|ZP_02884391.1| type IV / VI secretion system protein, DotU family [Burkholderia graminis C4D1M] gi|170141761|gb|EDT09929.1| type IV / VI secretion system protein, DotU family [Burkholderia graminis C4D1M] Length = 446 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 5/107 (4%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAY 293 +F + LP+ I +L+++ L + + GHTD P + +DN+ LS RA Sbjct: 336 ALFPSGGADLLPDEIPLLRRVASALNQVRGRVIVVGHTDDQPVHSLRFKDNFALSTARAQ 395 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI-ASD--PMNSANRRIDIL 337 + VL G+ + R + +G + +D + NRR++IL Sbjct: 396 NTLAVL-AQGLDDPRRLEANGAGSSQPIATPADLPANRARNRRVEIL 441 >gi|94501021|ref|ZP_01307545.1| peptidoglycan-associated lipoprotein, putative [Oceanobacter sp. RED65] gi|94426768|gb|EAT11752.1| peptidoglycan-associated lipoprotein, putative [Oceanobacter sp. RED65] Length = 180 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 7/140 (5%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + V ++ V + + + + F S PE VL E L Sbjct: 40 QQSETQAVPESPNVDVNTDAQAEAAQNNPLLDQTVVYFGFDRSELRPEFKDVLNAHAEYL 99 Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + ++ GH D N L RA + + L+ GV+ ++ +S + Sbjct: 100 VANPQASLTVEGHCDER---GTVEYNLALGERRAETVKRYLIVQGVAPSQLETVS-YGEE 155 Query: 319 RLKI--ASDPMNSANRRIDI 336 R + + + S NRR ++ Sbjct: 156 RPAVMGSDESAWSKNRRAEL 175 >gi|300896337|ref|ZP_07114879.1| outer membrane protein A [Escherichia coli MS 198-1] gi|300359748|gb|EFJ75618.1| outer membrane protein A [Escherichia coli MS 198-1] Length = 354 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 226 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 282 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 283 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 341 Query: 338 VED 340 V+ Sbjct: 342 VKG 344 >gi|54307294|ref|YP_128314.1| putative OmpA family protein [Photobacterium profundum SS9] gi|46911714|emb|CAG18512.1| Putative OmpA family protein [Photobacterium profundum SS9] Length = 241 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L G+ I++++ N F S + L+ + Sbjct: 101 YMDVQETKLRQQLESTGISVTRDGDNIVLNM---PNEITFGFDQSDLSSRAVAALKNVAL 157 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V + I++ G TD++ A N RLS RA LM+ GV+ +R+ G Sbjct: 158 VAKEYDKTLINVYGFTDST---GSASYNQRLSQVRASEVSSNLMRGGVAANRVIT-KGMG 213 Query: 317 HHRLKIASDPM--NSANRRIDILV 338 ++ + NRR++I++ Sbjct: 214 EANPIASNKTEQGRAENRRVEIVL 237 >gi|84688003|ref|ZP_01015866.1| OmpA family protein [Maritimibacter alkaliphilus HTCC2654] gi|84663984|gb|EAQ10485.1| OmpA family protein [Rhodobacterales bacterium HTCC2654] Length = 142 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 10/109 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 Q +F S + L++ + ++ GHTD+ N RLS + Sbjct: 35 QNTDVLFKTDSYQLTAQGQQWLRQFFA--SAGAFAYAVYGHTDSR---ASDEYNMRLSQN 89 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + V +SG DR + GF R ++ NRR++I+ Sbjct: 90 RANTVAGVARQSGAVVDR---VVGFGERRPIAPNNSAANMQKNRRVEIV 135 >gi|300902879|ref|ZP_07120825.1| outer membrane protein A [Escherichia coli MS 84-1] gi|301302427|ref|ZP_07208558.1| outer membrane protein A [Escherichia coli MS 124-1] gi|300405092|gb|EFJ88630.1| outer membrane protein A [Escherichia coli MS 84-1] gi|300842266|gb|EFK70026.1| outer membrane protein A [Escherichia coli MS 124-1] gi|315258005|gb|EFU37973.1| outer membrane protein A [Escherichia coli MS 85-1] Length = 358 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|330010302|ref|ZP_08306729.1| outer membrane protein A [Klebsiella sp. MS 92-3] gi|328534592|gb|EGF61172.1| outer membrane protein A [Klebsiella sp. MS 92-3] Length = 364 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + G+TD N +LS Sbjct: 236 KSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRI---GSEAYNQQLS 292 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +IS G + +A +RR++I Sbjct: 293 EKRAQSVVDYLVAKGIPAGKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 351 Query: 338 VED 340 V+ Sbjct: 352 VKG 354 >gi|260751226|gb|ACX48919.1| cellulase [Streptomyces sp. GS11] gi|307574878|gb|ADN52664.1| cellulase [uncultured bacterium] Length = 340 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 56/140 (40%), Gaps = 11/140 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISII--DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 +V + V+ V+ T I+ + T FD S+ + L +++ Sbjct: 197 EPVVQEKAVEEVVEARPATRIVDHVYPAQTTATVQFDLESAEVKDASN--LSGTVDLMNT 254 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + I G++D + A N +L+ RA + G++ +R+ + G Sbjct: 255 YPQAQVEITGYSDTT---GSAAYNKQLTEKRAKAVADEFQAKGIAAERM-TVKGMGEANP 310 Query: 321 KIASDP--MNSANRRIDILV 338 +++ NRR++++V Sbjct: 311 VASNETRQGRQMNRRVEVVV 330 >gi|254292855|ref|YP_003058878.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814] gi|254041386|gb|ACT58181.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814] Length = 222 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 10/146 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + L GV I + + F + + VLQ +G Sbjct: 80 RYMDQQEKKLRERLDETGVGVTRVGDTIQLVMPGDIT---FATGRAEINNQFDYVLQDVG 136 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL V+ I GHTD + N LS RA + LM+ G+ R+ ++G+ Sbjct: 137 LVLQEFDKTVVFIDGHTDTV---GSYQKNDELSQARANNVAARLMQEGILGGRLV-VTGY 192 Query: 316 AHHRLKIASDPM--NSANRRIDILVE 339 RLK+ + NRR++I +E Sbjct: 193 GESRLKVPTGDGVNEPLNRRVEIRLE 218 >gi|83593142|ref|YP_426894.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170] gi|83576056|gb|ABC22607.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170] Length = 229 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 19/174 (10%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 +E I + + K +++L ++ + L ++ V + G++I ++ ++ Sbjct: 59 QESIGSREVTKPIEELRQQTGDVIKSLQVED---VVGLGQDQQGLVIEF---ASSAFYEP 112 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIAR-DNWRLSLDRAYSA 295 S+ P I VL+++ L I+GHTD P NW LS RA Sbjct: 113 GSADIRPTAIPVLEQVIATLNEPRYQGFQIEIQGHTDDIPINTAQYPSNWELSGARATRV 172 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILVEDR 341 + ++ GV+++R+ I+ +A K+ + NRRI + V R Sbjct: 173 LRFMLDQGVAKERVLAIA-YADVAPKVPNRTPEGQAIPLNQELNRRIAVRVFPR 225 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/219 (9%), Positives = 66/219 (30%), Gaps = 16/219 (7%) Query: 22 AIDDTPNNLG--SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 D P + +W I +AD +L+ FF ++ I++ D + ++ + Sbjct: 9 RHHDAPEHDDTDAWLISFADMSCLLLGFFAMLASISSVDLVQYEKVKAGIQESIGSREVT 68 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL--------KIGSTNQKKQYQRLENNI 131 Q + +++ + + + + + GS + + + + Sbjct: 69 KPIEELRQQTGDVIKSLQVEDVVGLGQDQQGLVIEFASSAFYEPGSADIRPTAIPVLEQV 128 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF------LPPLSKEKILA 185 N + + + + ++ ++ ++KE++LA Sbjct: 129 IATLNEPRYQGFQIEIQGHTDDIPINTAQYPSNWELSGARATRVLRFMLDQGVAKERVLA 188 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + + + + + + + + I Sbjct: 189 IAYADVAPKVPNRTPEGQAIPLNQELNRRIAVRVFPRAI 227 >gi|332879955|ref|ZP_08447639.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681951|gb|EGJ54864.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 650 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 89/283 (31%), Gaps = 28/283 (9%) Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 G + R + D + V + K + + Sbjct: 372 ENGTVSKPINIGRPGNSADDDFCFVMDSDTKVGFLSSNRPGGKGRDDIYSFYEEKPLVFD 431 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 E + +DSEK + + +E + K +DL + Sbjct: 432 CEKMIKGVLKDSEKNDVIADGVIVLSDKTMKEVARQKTKADGSFAF--EKVDCKDLYYYL 489 Query: 200 SSTLSGLVADNIVKGVLFETTRTGI------LISIIDQRN--------TPMFDKSSSIPL 245 + + V + + E I+I + FD S Sbjct: 490 RAEIGDYVTTEVKVDLSVEGDVFYEFMIKPREIAIDKDVDLAKVLNIKEIYFDLDKSDIR 549 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P+ V L KI EV+ + ++ IR HTD+ N +LS RA + + ++K G+ Sbjct: 550 PDAAVELAKIVEVMRENPKMKIDIRSHTDSR---GADSYNLKLSDRRAKATLEWIVKQGI 606 Query: 305 SEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 R++ G+ +L +D + ANRR + ++ Sbjct: 607 ERKRLTA-KGYGETQLVNGCSNGVPCTDEEHQANRRSEFIIVS 648 >gi|262373433|ref|ZP_06066711.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205] gi|262311186|gb|EEY92272.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205] Length = 159 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 +FD + S PE + ++ + L + + I GHTD N +LS + Sbjct: 52 PERLLFDFNKSDIKPENGKEIIRLAKQLNKYDLQKLKIVGHTDDI---GNPEYNQKLSEE 108 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA S + + G + ++ + G ++ + + D ++NRR+ I++ Sbjct: 109 RAQSVAGIFLNEGFKQTNLN-VIGRGSNQPFVPNTSDENRASNRRVAIII 157 >gi|324113719|gb|EGC07694.1| OmpA transmembrane domain-containing protein [Escherichia fergusonii B253] gi|325496887|gb|EGC94746.1| outer membrane protein A [Escherichia fergusonii ECD227] Length = 359 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 231 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 287 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 288 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 346 Query: 338 VED 340 V+ Sbjct: 347 VKG 349 >gi|224584423|ref|YP_002638221.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468950|gb|ACN46780.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 358 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 230 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ ++IS G + P + +RR++I Sbjct: 287 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|254249294|ref|ZP_04942614.1| Outer membrane protein [Burkholderia cenocepacia PC184] gi|124875795|gb|EAY65785.1| Outer membrane protein [Burkholderia cenocepacia PC184] Length = 263 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ + L + ++I G TD++ A N LS RA + Sbjct: 160 FATDSAALTSQARNDLDRFIAANRGVEFARVAITGFTDST---GSAAHNRTLSEARARTV 216 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 L +G+ R G ++ + NRR++I ++ + Sbjct: 217 VNYLRSNGLQA-RSFSAEGLGAADPVASNATADGRAQNRRVEIRLDVK 263 >gi|221196013|ref|ZP_03569060.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] gi|221202687|ref|ZP_03575706.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221176621|gb|EEE09049.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221182567|gb|EEE14967.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] Length = 405 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 9/157 (5%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + +RL + L + V ++++ R MF + P Sbjct: 251 REAQRLSPFDALARNLERRLRDEVAAGNVELIRDPAHHVLTL---RFAGMFVPGAVTVAP 307 Query: 247 ETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG 303 V+ G +A E +R G+ D++P + + N +S RA ++L+ +G Sbjct: 308 WGASVVASAGREIASIAEGAVVRVVGYADSAPAGSARQISNQAISEARAEDVARILVAAG 367 Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 V + ++ G + + NRR++++V Sbjct: 368 VPAHGL-RVEGRGDADALADNGTESGRARNRRVEVIV 403 >gi|227538856|ref|ZP_03968905.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300] gi|227241365|gb|EEI91380.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300] Length = 230 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 7/114 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286 I+ +FD + S + K+ L + + GHTD N + Sbjct: 106 IVKFDEGILFDFNKSDLKASAKTNISKLVATLNKEPDTKILVIGHTDNV---GSLAANQK 162 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 +S RA + + G++ RI+ G + ++D + NRR++I++ Sbjct: 163 VSEARAAAVKTYAVSQGLNGGRINT-EGKNYSEPLASNDTDAGRAENRRVEIVI 215 >gi|332280324|ref|ZP_08392737.1| OmpA/MotB:SmpA/OmlA [Shigella sp. D9] gi|332102676|gb|EGJ06022.1| OmpA/MotB:SmpA/OmlA [Shigella sp. D9] Length = 245 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 18/129 (13%) Query: 226 ISIIDQRNTPMFD---KSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNI 280 I + +F +S + + L + L I + GHTD Sbjct: 116 IQRYTLNSDTLFAFDKSGTSDMSQQGLADLDHLAMNLNSFEKINGIIVIGHTDRL---GS 172 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK----IASDPMN-----SAN 331 N LS RA + Q L+ G+ ++I+ I G + +D + N Sbjct: 173 EDYNLTLSRKRAETVRQYLIAKGLPAEKITSI-GMGKSQPVKKCKYNNDRASLIVCLQPN 231 Query: 332 RRIDILVED 340 RR+++ V+ Sbjct: 232 RRVEVEVDG 240 >gi|195874240|ref|ZP_02701347.2| outer membrane protein A [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630051|gb|EDX48703.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 358 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 230 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+IS G + P + +RR++I Sbjct: 287 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|153831721|ref|ZP_01984388.1| outer membrane protein OmpA [Vibrio harveyi HY01] gi|148872231|gb|EDL71048.1| outer membrane protein OmpA [Vibrio harveyi HY01] Length = 321 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 6/76 (7%) Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + I G++D + N +L+ RA + + G++ DR+ + G ++ Sbjct: 238 QVEINGYSDTT---GSEAYNQQLTEKRAQAVAEHFQAEGIAADRM-TVKGMGEANPVASN 293 Query: 325 DPMNSA--NRRIDILV 338 + NRR++++V Sbjct: 294 ETREGREENRRVEVVV 309 >gi|42524036|ref|NP_969416.1| outer membrane protein [Bdellovibrio bacteriovorus HD100] gi|39576244|emb|CAE80409.1| probable outer membrane protein [Bdellovibrio bacteriovorus HD100] Length = 440 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 97/293 (33%), Gaps = 15/293 (5%) Query: 54 INATDDDTKKAIEQY---FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110 ++ D ++ + +Y + + + ++ + + Sbjct: 154 LSPADKRGEEIVSRYRDLELKSVTKAYLGTAKDNLDTAKKAGADKSAPKSFGMAAMKYEN 213 Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 + I + + + + E + +SE+ + + S + Sbjct: 214 AEKLIKADPRNAPVIARASQDATRESQHLMEVTRKVNAGNSEELVLMAERQQRTISNLRS 273 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 E + +R++ + + + + L + T +++ + Sbjct: 274 EYSSTEQELQTVQSEAERQRMELEKQQTLLNRAQALRSQLKPNEAEVFTENGKLMVRLKG 333 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289 + F + S P+ +L+K+ LA + + I GHTD A N LS Sbjct: 334 LQ----FPTAQSNLGPKNQALLKKVEGALAGVTPKKVIIEGHTDNV---GSAEANRILSE 386 Query: 290 DRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 RA S L+ G + +++ + G + ++ + NRRID+++E Sbjct: 387 KRAQSVENFLVSQGTLPAEKVESV-GMGYDNPVGNNNTAAGRAQNRRIDLVIE 438 >gi|223040101|ref|ZP_03610381.1| OmpA/MotB [Campylobacter rectus RM3267] gi|222878578|gb|EEF13679.1| OmpA/MotB [Campylobacter rectus RM3267] Length = 256 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 10/172 (5%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 + + + K + ++ ++ +++ L+ + V FE + +G +I + Sbjct: 67 PDAGAEQNQDDHATSNKERTGVKSNFEQTLRSINELLHASGSPEVTFEESESGFVIRLPA 126 Query: 231 QRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVI--SIRGHTDA-SPFRNIARDNWR 286 +FDK S+ + ++ L++I V+A + ++ GHTD+ P +DNW+ Sbjct: 127 NL---LFDKDSARLQNDDALLFLKRIAMVIAKLPPDVVANVIGHTDSEQPGSAEFKDNWQ 183 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 LS RA S L+K GV +++ S A + NRR++I Sbjct: 184 LSSARAISVVTELIKDGVDPKKLTA-SAKAEFEPFATNFTEQGREKNRRVEI 234 Score = 36.5 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 15/126 (11%), Positives = 42/126 (33%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + KK + D P L W + D M++L+ FF+++ ++ D +A + Sbjct: 1 MAKKLIDPADCPKCLPGWLAAFGDLMSLLLCFFVLLLSMSTMDAKKLEAAIGSLSGALGI 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 L + K + + + + + + + + ++ + + Sbjct: 61 LESGVKPDAGAEQNQDDHATSNKERTGVKSNFEQTLRSINELLHASGSPEVTFEESESGF 120 Query: 136 NSQQSE 141 + Sbjct: 121 VIRLPA 126 >gi|88800584|ref|ZP_01116145.1| chemotaxis MotB protein, putative [Reinekea sp. MED297] gi|88776639|gb|EAR07853.1| chemotaxis MotB protein, putative [Reinekea sp. MED297] Length = 355 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 96/284 (33%), Gaps = 13/284 (4%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 + D+ + S Q++ + TKN ++ +T + + Sbjct: 67 AEQQRQTLTQARNQLTNELDQLRSAQNSVQSQQSQLQAQLSTKNQEVEQLQATLTATEAR 126 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 E N +Q + +L + + + E + + + + Sbjct: 127 LQEINTNLEVANQLIAEQQGALDEAATTEERFLAARQQLALEQAENETYSETVERLRQEM 186 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + L ++ + LS L + E T I + + +F + Sbjct: 187 AAETAAMNALEAQLQTQLSQLNQEKEKLVTQLEDGTTAIKL-----PESILFASGRADIN 241 Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVLM 300 E L + L+ ISI+GHTD+ NW LS RA SA + L+ Sbjct: 242 AEGRQSLANLATALSSFPNHLISIQGHTDSQTIAPATAEKYPTNWELSAARAASAVRELL 301 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 K G+ D++ + G+A R + NRRI++++ Q Sbjct: 302 KQGIPADQMQAV-GYADTRPLVEETSAQTRQQNRRIEVILLPNQ 344 >gi|256823021|ref|YP_003146984.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069] gi|256796560|gb|ACV27216.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069] Length = 330 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 58/157 (36%), Gaps = 8/157 (5%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 A + + + ++ V V I ++ FD + + Sbjct: 176 ARTNSEDTSERVFAQVDVVEEKAQESKVVMVKASEMAQEIDLNGKVALYGLYFDTNKASI 235 Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KS 302 E+ L +I ++L + + + + GH+D N LS RA S Q L+ Sbjct: 236 KAESKPTLDEIAKLLKDNPDLKLLVVGHSDNQ---GDFDYNIDLSKRRAESVKQALVSDY 292 Query: 303 GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 GV+ R+ G + ++ + + NRR++++ Sbjct: 293 GVNAARLKPW-GVGYAAPVASNKAEQGRAKNRRVELV 328 >gi|152981732|ref|YP_001352854.1| OmpA family protein [Janthinobacterium sp. Marseille] gi|151281809|gb|ABR90219.1| OmpA family protein [Janthinobacterium sp. Marseille] Length = 229 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + F S P +L + L + ++I GHTD++ N LS D Sbjct: 105 PSDISFATGRSDINPSLQPILDRFATGLVDNPTATVTIIGHTDST---GSDAINNPLSFD 161 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA L GV+ RI + G H ++ + NRR++I V Sbjct: 162 RASRTRDYLTGRGVAPQRIY-VDGRGSHEPIASNADAAGRARNRRVEIFV 210 >gi|86143203|ref|ZP_01061605.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis MED217] gi|85830108|gb|EAQ48568.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis MED217] Length = 279 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 74/195 (37%), Gaps = 7/195 (3%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + + L +L ++ LSK + + K L+D S D+ Sbjct: 72 DDNYQKLDLVENLAVMSESTKDKMRETLSKVDQNELAQAKSLEDSMNLAISYNLKKNLDD 131 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIR 269 V + +I+ + +F+ S + +L+++ +V+ + + Sbjct: 132 SVGEDEDIQVDIDETVVMINVSDKLLFNSGSYRVSNKADGLLKRLADVINSEPAIKVMVE 191 Query: 270 GHTDASPFRNIAR--DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP 326 GHTD + A DNW LS++R+ + + L K V ++ G + + + + Sbjct: 192 GHTDDQTVKPGAYIKDNWELSVERSTAIIRELQDKYNVDPAKLIAA-GRSSYLPLVDNAT 250 Query: 327 M--NSANRRIDILVE 339 + NRR I++ Sbjct: 251 KEDRAKNRRTRIVIL 265 >gi|167949850|ref|ZP_02536924.1| sodium-type flagellar protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 285 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F + +L+++ + L + + I GH D + N +LS RA + Sbjct: 182 FAFNLHDLDASAKALLKELADYLNRDERVKSVRIEGHADDQ---GRRKYNLKLSERRAMA 238 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 L++ GV + R++ + R K+ S + NRR+ IL+ Sbjct: 239 VKAYLVEQGVEQARLATFH-YGESRPKVRSRSQKARAKNRRVAILL 283 >gi|108761081|ref|YP_635504.1| OmpA family protein [Myxococcus xanthus DK 1622] gi|108464961|gb|ABF90146.1| OmpA family protein [Myxococcus xanthus DK 1622] Length = 352 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 84/290 (28%), Gaps = 10/290 (3%) Query: 60 DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119 T + + + K+ ++ P ++ I + D K Sbjct: 65 PTVRGLARLQGCPAKDTDGDGVEDALDKCPRHAGPASREGCPIRDSDEDGVEDAKDACPR 124 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 +R + ++ C D + +E P Sbjct: 125 VFGLLERQGCPVDDPDRDGVEGAADKCPDEPGPASREGCPIRDADGDGVPDEEDACPDEE 184 Query: 180 KEKILAM--KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 L +R +A + A + R I ++ F Sbjct: 185 GLPSLRGCPERDVDGDGVADHRDNCPRERGAVDNQGCPAARKQRVVIRPDRLELLERITF 244 Query: 238 DKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 ++ P L + +VL VI+I GHTD ++L RA + Sbjct: 245 APGTAALQPRVQPALDNVADVLLVHPRLGVIAIEGHTDNR---GDPDVQREVTLARAEAV 301 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 L++ GV DR+ GF + +++ NRR+D+ V +G Sbjct: 302 RDYLVERGVPPDRLEAW-GFGPDKPVESNETAQGREANRRLDLRVVAPRG 350 >gi|296534445|ref|ZP_06896882.1| chemotaxis protein MotB [Roseomonas cervicalis ATCC 49957] gi|296265230|gb|EFH11418.1| chemotaxis protein MotB [Roseomonas cervicalis ATCC 49957] Length = 143 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 1/143 (0%) Query: 5 GDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKA 64 +++ I+++++ D ++ G+WKI YADF+T +MAFFL+MW+INAT D + Sbjct: 2 AKRDKNQRTVIVVRREEGGGDGGHHGGAWKIAYADFVTAMMAFFLLMWLINATSDAQRVG 61 Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + YF P L G + +S N + + + + + + + Sbjct: 62 LADYFAPTNV-LSRGPSGAGEPFGGRTINSTNTLAGETPPAMGERPMSPLPWTREDRPED 120 Query: 125 QRLENNIFYLSNSQQSEHCKNSL 147 + + + + Sbjct: 121 EPDDPPAEPQPPRRFRASPEAPE 143 >gi|126729097|ref|ZP_01744911.1| OmpA family protein [Sagittula stellata E-37] gi|126710087|gb|EBA09139.1| OmpA family protein [Sagittula stellata E-37] Length = 227 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ I L++ + E + GH D N L L RA + Sbjct: 83 FAFNSAQLDQGAIDTLREQARWIRQFPEVRFRVYGHADKV---GNQAYNKSLGLRRANAV 139 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L+ G+S R+ + F + I ++ NRR Sbjct: 140 VNYLVSQGISRSRLEAVVSFGETQPLIVTEGRERRNRR 177 >gi|167572326|ref|ZP_02365200.1| hypothetical protein BoklC_20981 [Burkholderia oklahomensis C6786] Length = 470 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + P+ + ++++G Sbjct: 242 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKAKVRPDFMHNIERLGL 299 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L + + Sbjct: 300 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRATALPGGARAPENAVQ 359 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 360 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 391 >gi|146993|gb|AAA24237.1| outer membrane protein II [Escherichia vulneris] Length = 244 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 125 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 181 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337 RA S L+ G+ ++IS G + D + + +RR++I Sbjct: 182 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKARPALIDCLAPDRRVEIE 240 Query: 338 VED 340 V+ Sbjct: 241 VKG 243 >gi|118588929|ref|ZP_01546336.1| hypothetical protein SIAM614_12793 [Stappia aggregata IAM 12614] gi|118438258|gb|EAV44892.1| hypothetical protein SIAM614_12793 [Stappia aggregata IAM 12614] Length = 533 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN--IARDNWRLSLDRAYS 294 FD +++ PE ++++++ + L I + GHTD+ P RN NW LS++RA + Sbjct: 418 FDVAAATLRPEFQLLVEQVSQTLDQVDGEILVVGHTDSDPIRNNPRFPTNWHLSVERAKA 477 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 V+ + R+ ++ G + NRR+++ ++ Sbjct: 478 VAAVMESVLQTPGRV-QVEGRGADEPIAPNTSKEGKALNRRVEVFLKPP 525 >gi|161503852|ref|YP_001570964.1| outer membrane protein A [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865199|gb|ABX21822.1| hypothetical protein SARI_01940 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 358 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + PE L ++ L + + + G TD N LS Sbjct: 230 KSDVLFTFNKDNLKPEGKQALDQLYNQLNNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 287 EKRAQSVVNYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|197119876|ref|YP_002140303.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem] gi|197089236|gb|ACH40507.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem] Length = 199 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 56/173 (32%), Gaps = 7/173 (4%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 K E S ++ +++ + A ++ G + Sbjct: 29 KTEEPISAAQSAPAPAPVQTQQQARPEAPAAQQPITETTPSREQPVAQETPKDAGKAQEV 88 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRL 287 + F+ SS E L K E L+ I G+ D N L Sbjct: 89 QAELQKVYFNFDSSDLSEEARASLSKNAEYLSRQAGTKVRIEGNCDER---GSDDYNMAL 145 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338 RA SA L+ G++ DR+S IS + + + + NRR + ++ Sbjct: 146 GERRAKSAKDYLVNLGIASDRLSTIS-YGEEKPADPGHDEAAWAKNRRDEFVI 197 >gi|220905238|ref|YP_002480550.1| OmpA/MotB domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869537|gb|ACL49872.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 331 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 14/210 (6%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM--KRK 189 +LS+ ++ D+ +G DL + + + + + K K+ Sbjct: 128 PFLSSMKRDAAVILVTDGDNNRGADLVEVARQMYASQRNLVVHIISFADSKNGEETIKQV 187 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L + + + VL + +I + F +S + + Sbjct: 188 AALNPATIVVRGEELATSDAALERFVLSVFCQDEDVIVLRGVH----FAFNSYALDGKAM 243 Query: 250 VVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L + ++ + + G TD N +LS +RA S L+K G+ R Sbjct: 244 GILNEAAGLIKANPNKRVVLAGWTDWI---GSDAYNMKLSQERANSVKNYLVKQGIPASR 300 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDI 336 ++ I G K ++ NRR +I Sbjct: 301 MTAI-GRGKSF-KYNNETAEGRAMNRRTEI 328 >gi|254450850|ref|ZP_05064287.1| peptidoglycan-associated lipoprotein [Octadecabacter antarcticus 238] gi|198265256|gb|EDY89526.1| peptidoglycan-associated lipoprotein [Octadecabacter antarcticus 238] Length = 175 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F+ +S L L+ +++ +++ GH D N L R Sbjct: 65 DRVLFEVDTSTLTAVGRNTLDGQAGWLSTNSDYLAVIEGHADEQ---GTREYNLALGARR 121 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDIL 337 A + + L+ G++ RI +S + R + + + NRR + I+ Sbjct: 122 ANAVREYLISRGLASSRIRTVS-YGKERPLAVCSEESCYAQNRRAVTII 169 >gi|89075798|ref|ZP_01162186.1| putative peptidoglycan-associated lipoprotein [Photobacterium sp. SKA34] gi|90580128|ref|ZP_01235936.1| putative peptidoglycan-associated lipoprotein [Vibrio angustum S14] gi|89048530|gb|EAR54105.1| putative peptidoglycan-associated lipoprotein [Photobacterium sp. SKA34] gi|90439013|gb|EAS64196.1| putative peptidoglycan-associated lipoprotein [Vibrio angustum S14] Length = 180 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 7/105 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 F +S PE +L+ L + + GH D N L RA + Sbjct: 79 FFKFDNSEIQPEYQAILEAHAAYLRDHPSIKVIVEGHADER---GTPEYNIALGERRANA 135 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 Q L GV ++S +S + + + + NRR ++ Sbjct: 136 VAQYLQALGVPASQLSIVS-YGEEKPLVLGHTDADYAKNRRAVLV 179 >gi|114048539|ref|YP_739089.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7] gi|113889981|gb|ABI44032.1| OmpA/MotB domain protein [Shewanella sp. MR-7] Length = 372 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 8/134 (5%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 V + + + F S++ E ++++ L + E I GH Sbjct: 237 HKVDSVGCTIYENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYLNKNPEFTVEIAGH 296 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328 N LS RA + ++L++ G+S+ R++ +G+ + +A D Sbjct: 297 ASNV---GKPDYNMTLSDKRADAVAKILVEKYGISQSRVTS-NGYGITKPLVAGDTKEAH 352 Query: 329 SANRRIDILVEDRQ 342 +ANRRI+ +V + Sbjct: 353 AANRRIEAIVTTTE 366 >gi|296283270|ref|ZP_06861268.1| hypothetical protein CbatJ_06596 [Citromicrobium bathyomarinum JL354] Length = 168 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 8/117 (6%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 + ++ +N FD LQ + ++ + +I GH D N Sbjct: 55 VRAVNGQNVIYFDTDRYNIDTADAAALQTQAQYMSQYPNITVTIEGHADER---GTREYN 111 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR-IDILV 338 L RA SA L+ G++ +RI +S + R + + NRR + ++V Sbjct: 112 LALGERRANSAKNYLVSLGIAANRIRTVS-YGEERPVATASTPEAWAKNRRAVTVVV 167 >gi|149200848|ref|ZP_01877823.1| OmpA family protein [Roseovarius sp. TM1035] gi|149145181|gb|EDM33207.1| OmpA family protein [Roseovarius sp. TM1035] Length = 220 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ L++ + + E + GHTDA N L + RA + Sbjct: 74 FAFNSAELDAGARDTLREQAQWIRQFPEVRFRVYGHTDAV---GSDSYNKSLGMRRAQAV 130 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L G+S R+ ++ F + I + NRR Sbjct: 131 VAFLTSQGISRARLEAVASFGETQPLIVTQGRERRNRR 168 >gi|262039986|ref|ZP_06013251.1| outer membrane protein A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042654|gb|EEW43660.1| outer membrane protein A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 364 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + G+TD N +LS Sbjct: 236 KSDVLFNFNKATLKPEGQQALDQLYTQLSNIDPKDGSAVVLGYTDRI---GSEAYNQQLS 292 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +IS G + +A +RR++I Sbjct: 293 EKRAQSVVDYLVAKGIPAGKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 351 Query: 338 VED 340 V+ Sbjct: 352 VKG 354 >gi|269103007|ref|ZP_06155704.1| peptidoglycan-associated outer membrane lipoprotein [Photobacterium damselae subsp. damselae CIP 102761] gi|268162905|gb|EEZ41401.1| peptidoglycan-associated outer membrane lipoprotein [Photobacterium damselae subsp. damselae CIP 102761] Length = 181 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277 + I + Q T F ++ PE +L+ E L + I GH D Sbjct: 60 MSEQEIRNQQLRQETTVFFKFDNAEIQPEYQAMLEAHAEYLRDHPAVKVIIEGHADER-- 117 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA + + L GV ++S +S + + + + NRR Sbjct: 118 -GTPEYNIALGERRAAAVVKYLQALGVPASQMSIVS-YGEEKPLVLGHTDADYAKNRRAV 175 Query: 336 IL 337 ++ Sbjct: 176 LV 177 >gi|163745845|ref|ZP_02153204.1| OmpA family protein [Oceanibulbus indolifex HEL-45] gi|161380590|gb|EDQ05000.1| OmpA family protein [Oceanibulbus indolifex HEL-45] Length = 231 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ VL++ + E + GHTD N L + RA + Sbjct: 86 FAFNSAQLDATAQAVLRQQAGWIRQFPEIRFRVYGHTD---LVGSQAYNRALGMRRAQAV 142 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L G+S R+ + + + I + NRR Sbjct: 143 VGYLSTLGISPSRLEAVVSYGETQPLIVTQGRERRNRR 180 >gi|91777910|ref|YP_553118.1| putative flagellar motor protein motB [Burkholderia xenovorans LB400] gi|91690570|gb|ABE33768.1| Putative flagellar motor protein motB [Burkholderia xenovorans LB400] Length = 170 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 2 NSHGDKNQENDQFIIIKKKVAIDDTPNNLG-SWKIVYADFMTVLMAFFLVMWIINATDDD 60 NS + ++ +I+++ +D + G +WKI YAD +T +MAFFL+MW++ +T Sbjct: 6 NSRAPQGEQALAPVIVRRSKKGEDHGGHHGGAWKIAYADCVTAMMAFFLLMWLLGSTSKY 65 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKI 98 K+ IE YFN +L+ ++G + + I Sbjct: 66 DKQGIEDYFNTPLSSLIGGNEGTAAARPSVVQGGGRDI 103 >gi|56477938|ref|YP_159527.1| outer membrane lipoprotein [Aromatoleum aromaticum EbN1] gi|56313981|emb|CAI08626.1| outer membrane lipoprotein containing OmpA/MotB domain [Aromatoleum aromaticum EbN1] Length = 189 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + + P P L ++ LA S E I + GHTD+ N +LS+ RA + Sbjct: 85 FSRGGTEPQPVLTPNLDRVASALASSPEVEIRVFGHTDSLD---SELHNLQLSIQRAETV 141 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 + L + G+ R+ G + + NRR++I++ Sbjct: 142 AEHLRRRGIPLVRLHA-DGKGEAEPIADNATEAGRAKNRRVEIVLR 186 >gi|312621091|ref|YP_003993819.1| outer membrane protein, ompa/motb family [Photobacterium damselae subsp. damselae] gi|311872812|emb|CBX86903.1| outer membrane protein, OmpA/MotB family [Photobacterium damselae subsp. damselae] Length = 210 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 56/150 (37%), Gaps = 6/150 (4%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + D+ L ++ FE + I D F+ +S + Sbjct: 62 QIQQYDIVDVDKELLKNILGKMNSGEKCFEYLLSNASIERDDTTARVYFNFDNSKLTRAS 121 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 I +L K+ E + S I GHTD+ N L RA S + + +GV+ + Sbjct: 122 IYILNKLIENVKASKSNYLIEGHTDSV---GTTSYNKDLGYRRAKSVIEFFVGNGVNRSQ 178 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDI 336 + IS + +D S NRR++I Sbjct: 179 LQGIS-EGELKPLETNDTSIGRSYNRRVEI 207 >gi|77456921|ref|YP_346426.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1] gi|77380924|gb|ABA72437.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1] Length = 166 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +F ++ ++++IG+ L E + + GHTDA N +LSL R Sbjct: 59 GKVLFGSDVESLNKQSTEIVERIGKALLGVGIERVRVDGHTDA---SGKETYNQQLSLRR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 A S VL G+ ++ I ++ G ++D NRR+ I+V Sbjct: 116 AKSVSNVLTSVGMKQENI-QLQGLGSREPVASNDTAAGRTENRRVSIVVSAD 166 >gi|87199040|ref|YP_496297.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444] gi|87134721|gb|ABD25463.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444] Length = 170 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 8/106 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD VLQ LA I+I GH D N L RA SA Sbjct: 68 FDTDRYNIDAADQGVLQSQAAWLARYPGKAITIEGHCDER---GTRDYNIALGERRANSA 124 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILV 338 L+ GV RI+ +S + R + + + NRR + + V Sbjct: 125 KNYLVSLGVDPGRITTVS-YGKERPLALGSDEDSWAKNRRAVTVTV 169 >gi|49476137|ref|YP_034178.1| peptidoglycan-associated lipoprotein [Bartonella henselae str. Houston-1] gi|49238945|emb|CAF28242.1| Peptidoglycan-associated lipoprotein [Bartonella henselae str. Houston-1] Length = 174 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + F SS P+ +L + E L + GH D N L R Sbjct: 64 DRVFFSLDSSSIEPDAEAILMRQAEWLLRYPFYSIVIEGHADER---GTREYNLALGQRR 120 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + L+ GVS RI IS + R + NRR Sbjct: 121 AVAVRNYLISLGVSAQRIQTIS-YGKERPVAVCDDISCWNQNRR 163 >gi|300770385|ref|ZP_07080264.1| lipoprotein PG3 [Sphingobacterium spiritivorum ATCC 33861] gi|300762861|gb|EFK59678.1| lipoprotein PG3 [Sphingobacterium spiritivorum ATCC 33861] Length = 230 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 7/114 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286 I+ +FD + S + K+ L + + GHTD N + Sbjct: 106 IVKFDEGILFDFNKSDLKASAKTNISKLVATLNKEPDTKILVIGHTDNI---GSLAANQK 162 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 +S RA + + G++ RI+ G + ++D + NRR++I++ Sbjct: 163 VSEARAAAVKTYAVSQGLNGGRINT-EGKNYSEPLASNDTDAGRAENRRVEIVI 215 >gi|170769190|ref|ZP_02903643.1| outer membrane protein A [Escherichia albertii TW07627] gi|170121842|gb|EDS90773.1| outer membrane protein A [Escherichia albertii TW07627] Length = 358 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 230 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 287 ERRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|326772136|ref|ZP_08231421.1| OmpA family protein [Actinomyces viscosus C505] gi|326638269|gb|EGE39170.1| OmpA family protein [Actinomyces viscosus C505] Length = 529 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLD 290 F S + VL + E + ++I GHTD N LS Sbjct: 243 GDVTFATDSDQLSTQADSVLATVVEQIKKYPSGGELTITGHTDDV---ADDAHNQDLSER 299 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA + + L K +SG ++ +D NRR++I + + Sbjct: 300 RAKAVSERLKKLTDLSAWKESVSGKGESSPRVPNDTDERRQINRRVEITLTPSK 353 >gi|294666305|ref|ZP_06731554.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603907|gb|EFF47309.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 419 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 10/148 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + LS +++ +T + +S + MF P+ V+ +I Sbjct: 278 LKQLLSAQERAGLLRVDEQADGQTRVRLS-----SAAMFASGGVEVEPQQRGVIAQIAAA 332 Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + + + GHTD P R+ +DN+ LS RA + QVL + R+ I G Sbjct: 333 IEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVEAI-GAGD 391 Query: 318 HRLKIAS---DPMNSANRRIDILVEDRQ 342 + + NRR++IL + + Sbjct: 392 SQPIAQPVQLPANRARNRRVEILFQPGE 419 >gi|255322336|ref|ZP_05363482.1| OmpA/MotB [Campylobacter showae RM3277] gi|255300709|gb|EET79980.1| OmpA/MotB [Campylobacter showae RM3277] Length = 256 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 10/177 (5%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + + K + ++ ++ +++ L+ + V FE + +G + Sbjct: 62 EGGAKPDVSAEQNQDDHATSNKERTGVKSNFEQTLRSINELLHASGSPEVTFEESESGFV 121 Query: 226 ISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVI--SIRGHTDA-SPFRNIA 281 I + +F K S+ + ++ L++I V+A + ++ GHTD+ P Sbjct: 122 IRLPANL---LFAKDSAKLQNDDALLFLKRIAMVIAKLPPDVVANVIGHTDSEQPASTEF 178 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 +DNW+LS RA S L+K GV +++ S A + + NRR++I Sbjct: 179 KDNWQLSSARAISVVSELIKDGVDPKKLTA-SAKAEFEPFVTNFTEQGREKNRRVEI 234 Score = 37.3 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 15/133 (11%), Positives = 44/133 (33%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + KK + D P L W + D M++L+ FF+++ ++ D +A + Sbjct: 1 MAKKLIDPGDCPKCLPEWLAAFGDLMSLLLCFFVLLLSMSTMDAKKLEAAIGSLSGALGV 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 L +K + + + + + + + + ++ + + Sbjct: 61 LEGGAKPDVSAEQNQDDHATSNKERTGVKSNFEQTLRSINELLHASGSPEVTFEESESGF 120 Query: 136 NSQQSEHCKNSLT 148 + + + Sbjct: 121 VIRLPANLLFAKD 133 >gi|315498712|ref|YP_004087516.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48] gi|315416724|gb|ADU13365.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48] Length = 187 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 62/166 (37%), Gaps = 11/166 (6%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + R + + ++ T + G L E ++ D FD Sbjct: 29 DDKITATNGRIDQQETRLTQLDQTTQEALTRATAAGKLAEGKFNYSVVLSDDSIK---FD 85 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYSAY 296 ++ VL + E L + + I+G TD++ N+RL RA S Sbjct: 86 TDKAVLSEAGKQVLADLAERLKRDNKNVYLEIQGFTDST---GTDDINYRLGNARADSVK 142 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L GV+ +R++ IS + + + +ANRR+ I+V Sbjct: 143 RFLNSQGVALNRMASIS-YGAEQPIAPNSTAQGRAANRRVVIVVLS 187 >gi|85705152|ref|ZP_01036252.1| OmpA family protein [Roseovarius sp. 217] gi|85670474|gb|EAQ25335.1| OmpA family protein [Roseovarius sp. 217] Length = 219 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ L++ + E + GHTDA N L + RA + Sbjct: 74 FAFNSAELDTGARDTLREQARWIRQFPEVRFRVYGHTDAV---GSDSYNKTLGMRRAQAV 130 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L G+S R+ ++ F + I +D NRR Sbjct: 131 VAFLSSQGISRARLEAVASFGETQPLIVTDGRERRNRR 168 >gi|327393374|dbj|BAK10796.1| outer membrane protein A precursor OmpA [Pantoea ananatis AJ13355] Length = 363 Score = 86.2 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L+ + + G TD + N +LS Sbjct: 235 KSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRI---GSEQYNQKLS 291 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337 RA S L+ G+ ++IS G + D + +RR++I Sbjct: 292 EKRAQSVVDYLVSKGIPANKISA-RGMGESNPVTGNTCDSVKGRKALIDCLAPDRRVEID 350 Query: 338 VED 340 V+ Sbjct: 351 VKG 353 >gi|24212756|ref|NP_710237.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601] gi|24193397|gb|AAN47255.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601] Length = 687 Score = 86.2 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 77/221 (34%), Gaps = 10/221 (4%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 ++ + + + + S K + S K L +N++ + Sbjct: 466 EEGKTEETKIEQPIENQKPNSAALKVIVADASTKQIIPDAKVTLFTPMNRKGESLVQDAD 525 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--- 236 K+ L K +L S +S + T + + Sbjct: 526 KKSFLIKKLPDNDFELFATASKYISESINIIQKNISKNGTVTIYLKAESDVDPVYNLRVY 585 Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + + E +L + L ++++ I I GHTD N RLS RA + Sbjct: 586 FEFNKTKITEENKKLLDPLVGYLLKNASDKIEIGGHTDNV---ASKEYNTRLSAKRARNV 642 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 Y+ L+ G+ E R+ +I + + + ++ + NRR+ Sbjct: 643 YEYLLSKGIPEKRM-RIRAYWYSQPDADNETETGRAKNRRV 682 >gi|332292539|ref|YP_004431148.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332170625|gb|AEE19880.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 652 Score = 86.2 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289 N FD + S P+ + L K+ + ++ IS+R HTD+ N LS Sbjct: 538 NLNPIYFDYNKSDIRPDAALELTKVISAMKQVPDMVISVRSHTDSR---GKDDYNLSLSD 594 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 RA S ++ G+ +RI G+ +L + ++ + NRR + +V Sbjct: 595 RRAKSTVAYIISRGIDANRI-SGQGYGETQLVNSCNNNADCTEEQHQLNRRSEFIV 649 >gi|300937693|ref|ZP_07152496.1| outer membrane protein A [Escherichia coli MS 21-1] gi|301023085|ref|ZP_07186892.1| outer membrane protein A [Escherichia coli MS 69-1] gi|300397206|gb|EFJ80744.1| outer membrane protein A [Escherichia coli MS 69-1] gi|300457294|gb|EFK20787.1| outer membrane protein A [Escherichia coli MS 21-1] Length = 358 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD N LS Sbjct: 230 KSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 287 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|294789485|ref|ZP_06754721.1| outer membrane porin F [Simonsiella muelleri ATCC 29453] gi|294482565|gb|EFG30256.1| outer membrane porin F [Simonsiella muelleri ATCC 29453] Length = 307 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 17/152 (11%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 L + + +S +V + E + + +FD S Sbjct: 156 DEAMHLMQKQQMQTHQISRVVPNCEQPPAPVEKVTIELKV---------LFDTDKSFVKS 206 Query: 247 ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304 + ++++ E + ++ GHTD+ N LS R + +L++ G+ Sbjct: 207 QYYSEIEQVAEYMKRFPNTSVTLEGHTDSR---ASDEYNIGLSQRRMNAVRDILIRRYGI 263 Query: 305 SEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 R+ + G+ R + + NRR+ Sbjct: 264 DGARVHAV-GYGESRPAYPNTTPENMHQNRRV 294 >gi|254474524|ref|ZP_05087910.1| OmpA family protein [Ruegeria sp. R11] gi|214028767|gb|EEB69602.1| OmpA family protein [Ruegeria sp. R11] Length = 185 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 11/139 (7%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + V + +I + F + LQ+ + + Sbjct: 52 VMDDGAEGFMTPHVTRDGKPVCRRGNICGVMPSDQFFATNKHRISAAGQKRLQEFFQ--S 109 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + I GHTD+ N RLS RA + +V G RI + G+ Sbjct: 110 ANASAFIITGHTDSR---ASDEYNMRLSQRRANAVAEVGESVG---ARILEARGYGERDP 163 Query: 321 KIASDPMN--SANRRIDIL 337 ++ +D + + NRR++I+ Sbjct: 164 RVPNDSASNMAQNRRVEII 182 >gi|147001|gb|AAA24241.1| outer membrane protein II [Escherichia vulneris] Length = 244 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 125 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 181 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337 RA S L+ G+ ++IS G + D + + +RR++I Sbjct: 182 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKARPALIDCLAPDRRVEIE 240 Query: 338 VED 340 V+ Sbjct: 241 VKG 243 >gi|308271860|emb|CBX28468.1| hypothetical protein N47_G37920 [uncultured Desulfobacterium sp.] Length = 191 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S++ +L+K L + + ++I GH D N L RA SA Sbjct: 90 FDYDSAVLSQSAQEILKKKAAYLEKYSAILVTIEGHCDDR---GTNEYNLALGEKRAQSA 146 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338 L+ G+S RI IS + + ++ + NRR ++ Sbjct: 147 RNFLINLGISSSRIKTIS-YGEEKPLDPANNEVAWAKNRRAHFIL 190 >gi|291616946|ref|YP_003519688.1| OmpA [Pantoea ananatis LMG 20103] gi|291151976|gb|ADD76560.1| OmpA [Pantoea ananatis LMG 20103] Length = 367 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L+ + + G TD + N +LS Sbjct: 239 KSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRI---GSEQYNQKLS 295 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337 RA S L+ G+ ++IS G + D + +RR++I Sbjct: 296 EKRAQSVVDYLVSKGIPANKISA-RGMGESNPVTGNTCDSVKGRKALIDCLAPDRRVEID 354 Query: 338 VED 340 V+ Sbjct: 355 VKG 357 >gi|189500639|ref|YP_001960109.1| peptidoglycan-associated lipoprotein [Chlorobium phaeobacteroides BS1] gi|189496080|gb|ACE04628.1| peptidoglycan-associated lipoprotein [Chlorobium phaeobacteroides BS1] Length = 158 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 F S+ P + L+ E L + + I GH D + N L R Sbjct: 53 KDVFFQYDSAELEPVAVSQLKNNAEWLNQNRTISAMIEGHCDER---GTSEYNMALGEKR 109 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339 A + L+++GV+ R+ +S F R + + NRR +V+ Sbjct: 110 AETTKSFLVRAGVAASRLETVS-FGEERPFDSGHTEAAWSKNRRAHFVVK 158 >gi|162145880|ref|YP_001600338.1| outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209543812|ref|YP_002276041.1| OmpA/MotB domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|161784454|emb|CAP53984.1| Outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209531489|gb|ACI51426.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 380 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDAS---PFRNIARDNWRLSLD 290 FD ++ ++ + T I + G+TD S P AR N LS+ Sbjct: 271 VFFDWDQAVLTDRARAIVATAAQASTRTQTTRIEVDGYTDNSAAHPGPRGARYNMALSVR 330 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA + L++ GV I + GF +A+ + NRR++I++ Sbjct: 331 RAQAVQAELIRDGVPGTAID-VHGFGETHPLVATGPNTREPQNRRVEIIL 379 >gi|226952116|ref|ZP_03822580.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp. ATCC 27244] gi|294648350|ref|ZP_06725858.1| peptidoglycan-associated lipoprotein [Acinetobacter haemolyticus ATCC 19194] gi|226837144|gb|EEH69527.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp. ATCC 27244] gi|292825762|gb|EFF84457.1| peptidoglycan-associated lipoprotein [Acinetobacter haemolyticus ATCC 19194] Length = 187 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS E LQ + L + +++ GHTD N L RA + Sbjct: 79 FDYDSSELSNEDYQTLQAHAQFLVANANSRVALTGHTDER---GTREYNMALGERRAKAV 135 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 L+ +GV+ ++ +S + ++ NRR++I Sbjct: 136 ESFLVTNGVNPQQLEAVS-YGKEAPVNPGHNEAAWKENRRVEI 177 >gi|169795057|ref|YP_001712850.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter baumannii AYE] gi|260556541|ref|ZP_05828759.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC 19606] gi|332851095|ref|ZP_08433204.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii 6013150] gi|332869632|ref|ZP_08438843.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii 6013113] gi|332875985|ref|ZP_08443771.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii 6014059] gi|169147984|emb|CAM85847.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter baumannii AYE] gi|260409800|gb|EEX03100.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC 19606] gi|322509070|gb|ADX04524.1| pal [Acinetobacter baumannii 1656-2] gi|323519051|gb|ADX93432.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter baumannii TCDC-AB0715] gi|332730259|gb|EGJ61584.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii 6013150] gi|332732679|gb|EGJ63911.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii 6013113] gi|332735851|gb|EGJ66892.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii 6014059] Length = 191 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS E LQ + L + +++ GHTD N L RA + Sbjct: 83 FDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 139 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 L+ SGV+ ++ +S + + NRR++I Sbjct: 140 QNYLITSGVNPQQLEAVS-YGKEAPVNPGHDESAWKENRRVEI 181 >gi|313674153|ref|YP_004052149.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312940851|gb|ADR20041.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 485 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 97/278 (34%), Gaps = 18/278 (6%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 I F ++ + ++ + P ++N ++ E + + + + + ++ Sbjct: 221 INTKFEETFVSIDPSFDYLYYDSYPSGAQNRNIWRATLSEELKEEIIKARDQNKKKEIIE 280 Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + I + +QSE T ++E + + E + E + +E Sbjct: 281 EPQSEEIIAKESDKQSEKIP---TENAESVANAKQPLQDEPTTAMESQPVAVKIDQEMDY 337 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 ++++ Q +I + D +K + I F S Sbjct: 338 VKEQERNNQGFLAQIGEKIGLGGKDEEIKLIDAGAKGQKI-------NRNVYFKFDSDKL 390 Query: 245 LPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + +L KI E L + ++ + GHTDA N LS RA L+ G Sbjct: 391 QGKFNSLLDKISEELEKNPQIKIMLEGHTDAI---GGEDINIDLSCSRANKVKDALIDRG 447 Query: 304 VSEDRISKISGFAHHRLKIASD---PMNSANRRIDILV 338 +++ RI +IS R +D NRR++ + Sbjct: 448 INQYRI-EISCEGKERPIATNDDEFEGRELNRRVEFYL 484 >gi|261884038|ref|ZP_06008077.1| flagellar motor protein MotB [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 85 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 35/85 (41%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + KK+ + + SW + Y+D MT+L+A F+V++ ++ D K + FN Sbjct: 1 MAKKRKKKHEEGHVDESWLLPYSDLMTLLLALFIVLFATSSVDVQKLKQFSEAFNQIFDG 60 Query: 76 LMTASKGIFDEQNPPERSSQNKIDL 100 + + P + D Sbjct: 61 GTSFMETPTSNPLPEAPKKEGNEDT 85 >gi|302347069|ref|YP_003815367.1| OmpA family protein [Prevotella melaninogenica ATCC 25845] gi|302150976|gb|ADK97237.1| OmpA family protein [Prevotella melaninogenica ATCC 25845] Length = 225 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 8/144 (5%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K++ + + + V V + ++ + +F + S L K Sbjct: 74 MDKVAREAAQQLPNARVDKVTDANGLDCVKVTF---DSGILFPLNGSNLSASAKNDLTKF 130 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++ ++ I+G+TDA N LS RA + L GVS +I + G Sbjct: 131 ASLMQRNSNCDVAIQGYTDA---SGNDNINLPLSQRRADAVSSYLKGRGVSSRQIRSVQG 187 Query: 315 FAHHRLKIASDPMNSANRRIDILV 338 F + ++ ANRR+++ + Sbjct: 188 FGSANPI-ENKTVSQANRRVEVYL 210 >gi|237730913|ref|ZP_04561394.1| outer membrane protein A [Citrobacter sp. 30_2] gi|226906452|gb|EEH92370.1| outer membrane protein A [Citrobacter sp. 30_2] Length = 356 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 228 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 284 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ D+IS G + +A +RR++I Sbjct: 285 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 343 Query: 338 VED 340 V+ Sbjct: 344 VKG 346 >gi|163796931|ref|ZP_02190887.1| Outer membrane protein and related peptidoglycan-associated lipo protein [alpha proteobacterium BAL199] gi|159177678|gb|EDP62229.1| Outer membrane protein and related peptidoglycan-associated lipo protein [alpha proteobacterium BAL199] Length = 165 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + F SS L+K L + +++ GH D N L R Sbjct: 60 DRVFFALDSSEVAANGRTTLEKQAFWLRKYPQATVTVEGHADER---GTREYNLALGERR 116 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333 A +A L+ GV RI+ IS + R +++ + NRR Sbjct: 117 AAAARDYLVSLGVDPSRIATIS-YGKERPDVLGSNEEAWAKNRR 159 >gi|114764947|ref|ZP_01444120.1| OmpA family protein [Pelagibaca bermudensis HTCC2601] gi|114542659|gb|EAU45683.1| OmpA family protein [Roseovarius sp. HTCC2601] Length = 221 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 4/103 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F +S+ L++ + E + GHTD N RL + Sbjct: 72 PTMVTFAFNSAQLDNGARATLREQANWIRQFPEVRFRVYGHTD---LVGSPAYNKRLGMA 128 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 RA + L G+S +R+ + + + I + NRR Sbjct: 129 RAQAVVSYLAAQGISRERLEAVVSYGETQPLIVTSERERRNRR 171 >gi|319796494|ref|YP_004158134.1| ompa/motb domain protein [Variovorax paradoxus EPS] gi|315598957|gb|ADU40023.1| OmpA/MotB domain protein [Variovorax paradoxus EPS] Length = 188 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 7/113 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290 N FD + VL K+ E L + + + GHTDA+ N RLS+ Sbjct: 79 PNELSFDTGRANVKRNLAQVLDKVAEGLKSATAASVRVVGHTDAT---GSEEGNERLSVS 135 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 RA S L+ GVS I+ G + + NRR++I V ++ Sbjct: 136 RADSVRNHLVGRGVSTTAITT-DGRGSREPLADNGTAAGRAQNRRVEIFVAEK 187 >gi|238757126|ref|ZP_04618313.1| OmpA domain protein [Yersinia aldovae ATCC 35236] gi|238704504|gb|EEP97034.1| OmpA domain protein [Yersinia aldovae ATCC 35236] Length = 433 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 8/120 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVV--LQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDN 284 + P+FD +S+ P L + ++L H+ I GH+D + N Sbjct: 306 FSSAQMAPLFDSNSTKLKPNAQTNEILHSLLQLLEHNQGSKILIVGHSDNT---GSDSFN 362 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 +S RA L+K+ I G ++D NRR+++L+ +Q Sbjct: 363 MTISEQRALVVRDWLIKNSSLSSENFIIRGMGSLEPVASNDTKIGQDQNRRVEVLLLPKQ 422 >gi|84501675|ref|ZP_00999847.1| OmpA family protein [Oceanicola batsensis HTCC2597] gi|84390296|gb|EAQ02855.1| OmpA family protein [Oceanicola batsensis HTCC2597] Length = 222 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ +L + + EV + GHTD + N+RL L RA + Sbjct: 79 FAFNSAALDATARQILARQAHWIRQFPEVRLRVYGHTD---LVGSSSYNYRLGLRRAQAV 135 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L+ G+S R+ + + + + NRR Sbjct: 136 VHFLVAQGISRSRLEAVVSKGETQPLVVTQGRERRNRR 173 >gi|328470084|gb|EGF40995.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus 10329] Length = 325 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 I G++D + A+ N +L+ RA + G++ DR+ + G +++ Sbjct: 245 ITGYSDTT---GSAQYNQQLTEKRAKAVANEFEAKGIAADRM-TVKGMGEANPVASNETR 300 Query: 327 -MNSANRRIDILV 338 ANRR++++V Sbjct: 301 QGREANRRVEVVV 313 >gi|268316295|ref|YP_003290014.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252] gi|262333829|gb|ACY47626.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252] Length = 209 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 10/142 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + E GIL++ + +FD S+ PE L+++ E L Sbjct: 65 QAAEMQQELPDARIERVGEGILVTF---DSGILFDFDSATLRPEAREKLRRLAESLKKYP 121 Query: 264 EV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 E + I GHTD++ N RLS RA +A LM+ G+ RI + G Sbjct: 122 ETEVLIVGHTDST---GPEEYNQRLSERRAEAAAAFLMQQGIRPSRI-RTMGKGETEPIA 177 Query: 323 ASDPMNSA--NRRIDILVEDRQ 342 ++ NRR++I + + Sbjct: 178 SNATEEGRQLNRRVEIAIFASE 199 >gi|163732607|ref|ZP_02140052.1| OmpA family domain protein [Roseobacter litoralis Och 149] gi|161393967|gb|EDQ18291.1| OmpA family domain protein [Roseobacter litoralis Och 149] Length = 319 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 34/247 (13%), Positives = 73/247 (29%), Gaps = 12/247 (4%) Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163 +T V + + Q + + L + Sbjct: 77 PGLTPLQVITPLRAQLQAQGFDLAFECDAPTCGGFDFRFNIEVLPGPNMYVNISQYRYLT 136 Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 S + + + + + S + + +L E Sbjct: 137 AFSAEPDGPRQAVGILVSTTASSSYVQVVSIDENTDLSVIVPRERPAEREPILAERNLDQ 196 Query: 224 ILISIIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFR 278 + + + F +S P L+++ E L+ + + + GHTD + Sbjct: 197 SVQMLPQDGRYVLPGLAFAIGTSDLGPGPFPALKELSEFLSTTEGIRIALVGHTDTT--- 253 Query: 279 NIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335 N LS RA S L++ GV+ D++ G + + D NRR++ Sbjct: 254 GALATNISLSRARAQSVRARLIEVYGVAPDKVDA-EGMGYLAPIATNLTDEGRRQNRRVE 312 Query: 336 ILVEDRQ 342 +++ + Q Sbjct: 313 VVLLNTQ 319 >gi|153837108|ref|ZP_01989775.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810] gi|149749696|gb|EDM60441.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810] Length = 325 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 I G++D + A+ N +L+ RA + G++ DR+ + G +++ Sbjct: 245 ITGYSDTT---GSAQYNQQLTEKRAKAVANEFEAKGIAADRM-TVKGMGEANPVASNETR 300 Query: 327 -MNSANRRIDILV 338 ANRR++++V Sbjct: 301 QGREANRRVEVVV 313 >gi|91217237|ref|ZP_01254198.1| OmpA family protein [Psychroflexus torquis ATCC 700755] gi|91184580|gb|EAS70962.1| OmpA family protein [Psychroflexus torquis ATCC 700755] Length = 616 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 56/158 (35%), Gaps = 12/158 (7%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPET 248 LQ A+ S + + V I+ + FD PE Sbjct: 463 DLQVNAEGYESQSNSFEVPQLQMVVRVALVPEMTSTEAKILILQERIFFDYDKVNIKPEA 522 Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 L K+ E+L + I + HTD N +LS DRA S L+++GV + Sbjct: 523 AFELDKLIEILKENENINIQVVSHTDER---GSGAYNMKLSQDRAGSTVAYLIENGVDPE 579 Query: 308 RISKISGFAHHRLKIA-----SDPMNSANRRIDILVED 340 R+S G L S+ + NRR + + D Sbjct: 580 RLSS-EGKGKSELIKDCISGCSEEEHEENRRSEFKIVD 616 >gi|283484404|gb|ADB23432.1| OmpA [Cronobacter sakazakii] Length = 347 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 219 KSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 275 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ ++IS G + P + +RR++I Sbjct: 276 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKPRAALIECLGPDRRVEIE 334 Query: 338 VED 340 V+ Sbjct: 335 VKG 337 >gi|126734660|ref|ZP_01750406.1| OmpA domain protein [Roseobacter sp. CCS2] gi|126715215|gb|EBA12080.1| OmpA domain protein [Roseobacter sp. CCS2] Length = 632 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 8/151 (5%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDKSSSIPLPETIV 250 ++ L + + + T I I+ + FD S+ +T Sbjct: 453 IEKLGQTADFEIDVTYVKELDPIAGIPTPEECIAQITAATEGRKITFDPGSADLTADTQP 512 Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 V+ I ++L + I + G TD+ N +LS DRA + L V Sbjct: 513 VVDDIADILKACGDLRIKVSGFTDSQ---GGEVMNQQLSQDRADAVLTALRARRVPVSTF 569 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + I GF +D NRRI+ + Sbjct: 570 TSI-GFGEENPIADNDTEEGREANRRIEFSL 599 >gi|89076013|ref|ZP_01162376.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34] gi|89048248|gb|EAR53829.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34] Length = 355 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S L I + L + E + + GHTD+ + N +LS +RA Sbjct: 237 FAFDSYKITHADKERLAPIAKRLQDNPETELVVVGHTDS---KGAEAYNQKLSEERAQKV 293 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 LM + + R+ + G ++ NRR+D+ Sbjct: 294 ATFLMNEYNLDSSRV-RAEGRGELNPVASNKTEAGRTDNRRVDVT 337 >gi|313677408|ref|YP_004055404.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312944106|gb|ADR23296.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 680 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 8/112 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 +D S+ + + L K+ +L + + + HTDA A N LS R Sbjct: 530 ENIYYDFDSANIRADAAIELDKLVTILKDNPPIKIELSSHTDAR---GEAAYNQELSKRR 586 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMNSANRRIDILVED 340 A SA ++ G+ RI G+ +L ++ + NRR + V + Sbjct: 587 AESAVAYIISQGIDPSRIKA-RGYGESQLIIEDAQTEEEHETNRRTEFKVTE 637 >gi|256820715|ref|YP_003141994.1| membrane-bound proton-translocating pyrophosphatase [Capnocytophaga ochracea DSM 7271] gi|256582298|gb|ACU93433.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga ochracea DSM 7271] Length = 919 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 77/281 (27%), Gaps = 12/281 (4%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F +K F+ K + +T ++V T+ ++ Sbjct: 643 FQNNAGGAWDNAKKSFEAGVEINGQMTYKGSDAHKAAVTGDTVGDPFKDTSGPSMNILIK 702 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + + + +E Sbjct: 703 LTCLVGLVIAPILGGHTADASGTPIEAQIRQGEGEGVMPVEEVVVIEEGKLNADGDFEYN 762 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR----NTPMFDKSSSIP 244 L L+ ++ L + V + + + F S Sbjct: 763 VGDLFQLSLFDNTMLEVGKNSSEAHLVKLIEDKNLTTLEQFKDNWITLDRTYFKTGSDEL 822 Query: 245 LPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + L+ I +L + I + G+TD + N +LS RA S L+ G Sbjct: 823 TEGSEQQLKNIVAILKAYPKAAIRLGGYTDNT---GSVEGNKKLSERRANSVLNKLVALG 879 Query: 304 VSEDRISKISGFAHHRLKIA-SDPMN--SANRRIDILVEDR 341 ++ ++S G+ +D + NRRIDI + + Sbjct: 880 ANKAQLSA-QGYGAEHPLCPANDTPECKAKNRRIDIRLTAK 919 >gi|167565227|ref|ZP_02358143.1| hypothetical protein BoklE_21929 [Burkholderia oklahomensis EO147] Length = 459 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + P+ + ++++G Sbjct: 227 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKAKVRPDFMHNIERLGL 284 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L + + Sbjct: 285 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRTTALPGGARAPENAVQ 344 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 345 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 376 >gi|119775600|ref|YP_928340.1| OmpA family protein [Shewanella amazonensis SB2B] gi|119768100|gb|ABM00671.1| OmpA family protein [Shewanella amazonensis SB2B] Length = 187 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD S+ E L + + + + ++GHTD N+RLS +RA + Sbjct: 84 FDFGSAFVPFEAAAKLAWLAKSIETDHVSLLLQGHTDDI---GTEAANYRLSAERADNVA 140 Query: 297 QVL-MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 L M + + RI+ S F ++ NRR+DIL+ Sbjct: 141 ASLAMDFAIPKARITTAS-FGESMPVAPNNTEIGRQQNRRVDILIL 185 >gi|167770207|ref|ZP_02442260.1| hypothetical protein ANACOL_01550 [Anaerotruncus colihominis DSM 17241] gi|167667529|gb|EDS11659.1| hypothetical protein ANACOL_01550 [Anaerotruncus colihominis DSM 17241] Length = 321 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 71/200 (35%), Gaps = 9/200 (4%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 + + + + + +PP ++ L ++ + + S + Sbjct: 53 PGDDTQQVVIGNAQDQGDQLLTATGDMPPPGDKESLERTDQQMPANFDELYEYLKSYAAS 112 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-- 266 + V + I +N F S+ L + +L +G+ L + I Sbjct: 113 QGMEDSVQISKGDGRVYIRF---QNNLFFAPDSAAILADAYPLLDFLGDCLNAVDDEILL 169 Query: 267 -SIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +I GHT A P + +W LS +RA + L + + + G+ + + Sbjct: 170 VNINGHTAAVPNGETYQVSDWMLSSERASNIAIYLDDKKDVDPKKLRPMGYGKNFPVADN 229 Query: 325 DPMNSA--NRRIDILVEDRQ 342 D + NRR+DI++ Q Sbjct: 230 DTIAGREENRRVDIVIISNQ 249 Score = 38.8 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 44/100 (44%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 P + G+W Y+D +T+L+ FF++++ +++ D + + I + F+ G + Sbjct: 2 KKKVRPPEDTGTWMNTYSDLVTLLLTFFVLLYSMSSVDAEKWEMIVKAFSNPGDDTQQVV 61 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 G +Q ++ + D+ + + + ++ Sbjct: 62 IGNAQDQGDQLLTATGDMPPPGDKESLERTDQQMPANFDE 101 >gi|50119379|ref|YP_048546.1| putative porin [Pectobacterium atrosepticum SCRI1043] gi|49609905|emb|CAG73343.1| putative porin [Pectobacterium atrosepticum SCRI1043] Length = 506 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 11/153 (7%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + R + LAK + ++ T G++ + D MFD +S+ + Sbjct: 78 QNREEALAKIAQEENIAITTRSLQSQEKSGTETVGLVAQVQDS---GMFDTNSAQLSTDG 134 Query: 249 IVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + ++KI + + VI + GHTDA+ A N RLS RA + +VL ++G+S Sbjct: 135 LRQVKKIATAMKEGDQSGVILVVGHTDAT---GSAEWNQRLSEQRAQNVGRVLEQAGLSA 191 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 ++ G R + + NRR++I+ Sbjct: 192 QKLY-FQGAGSARPVADNVTITGRTSNRRVEIV 223 >gi|262039316|ref|ZP_06012632.1| outer membrane porin F [Leptotrichia goodfellowii F0264] gi|261746660|gb|EEY34183.1| outer membrane porin F [Leptotrichia goodfellowii F0264] Length = 104 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 3/99 (3%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 ++++ + +FD S P+ +LQ + E + + ++I GHTD+ + N Sbjct: 9 VTVVLDERSLLFDFDKSNVKPQYYGILQNLKEYIEVNDYDVTIIGHTDS---KGTNEYNM 65 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +L + RA S +++ GV RI + + Sbjct: 66 KLGMRRAESVKAKMIEFGVPASRIVGVESRGEEEPVATN 104 >gi|227537401|ref|ZP_03967450.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300] gi|227242779|gb|EEI92794.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300] Length = 655 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 12/116 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +D + +L ++ L + I + HTD+ + N +LS +R Sbjct: 543 ENIYYDLDKYNIRADAKPILNQLVNTLRDNPTLKIELSSHTDSRATH---KYNMKLSQNR 599 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 A +A ++ G++ DRI G+ RL SD + ANRR +I V + Sbjct: 600 AQAAVDYIISRGIARDRIVA-KGYGETRLVNKCADGVKCSDEEHQANRRTEIKVLE 654 >gi|330445542|ref|ZP_08309194.1| peptidoglycan-associated lipoprotein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489733|dbj|GAA03691.1| peptidoglycan-associated lipoprotein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 180 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 7/106 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F +S PE +L+ L + + GH D N L RA Sbjct: 78 VFFKFDNSEIQPEYQAMLEAHAAYLRDHPSVKVIVEGHADER---GTPEYNIALGERRAT 134 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + Q L GV ++S +S + + + + NRR ++ Sbjct: 135 AVAQYLQALGVPASQLSIVS-YGEEKPLVLGHTDADYAKNRRAVLV 179 >gi|325068011|ref|ZP_08126684.1| OmpA/MotB domain protein [Actinomyces oris K20] Length = 499 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 76/287 (26%), Gaps = 14/287 (4%) Query: 58 DDDTKKAIEQYF----NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 DD + K I + + K S+ + P +DL + + Sbjct: 31 DDASVKDIAESYIDGDGDVFKATHPLSRPGSNPAFEPAAGGVRLLDLPTNRVWVATTGVE 90 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 N + + + + ++ + + + + Sbjct: 91 NKVKDNYNNLSLKPGESTSCFVLFGPVDAKQVTVFVPQAGFVTVNVLDSGAAAASGIDFK 150 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + + + + + I +++ Sbjct: 151 AIDKAFDSATIPQYTRDEADPKQALAAPVPIERYTKALDDSTSTHAGGKDITVTLASDVT 210 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDR 291 F S+ LQ + LA +SI GHTD N LS R Sbjct: 211 ---FASDSADLASGAEAQLQTVAGQLAQYPNGGTLSIVGHTDDVQ---DDAYNQTLSEKR 264 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336 A + L + + + +SG + K +D + NRR++I Sbjct: 265 ANAVKTRLEQLTKLDKWQTSVSGKGESQPKINDTTDEARAVNRRVEI 311 >gi|319762344|ref|YP_004126281.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans BC] gi|330825735|ref|YP_004389038.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans K601] gi|317116905|gb|ADU99393.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans BC] gi|329311107|gb|AEB85522.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans K601] Length = 180 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S PE VL+ L S+ + GHTD N L RA + Sbjct: 79 FDFDSFTVKPEYQSVLEGHSRYLKASSARKVMLEGHTDER---GGREYNLALGQKRAEAV 135 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 + L GV + ++ +S + + + + NRR+++ Sbjct: 136 RRSLALLGVPDAQMEAVS-YGEEKPAAQGHSESAFAQNRRVEL 177 >gi|163749262|ref|ZP_02156511.1| OmpA family protein [Shewanella benthica KT99] gi|161330981|gb|EDQ01907.1| OmpA family protein [Shewanella benthica KT99] Length = 220 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 50/144 (34%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N F P VL + Sbjct: 80 YMDVQEAELRKQLQSTGVSVTRSGDNIVLNM---PNEVTFGVDEVHLNPGAKKVLNSVAL 136 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V + +I G+TD+ N RLS RA L+ V R+ G Sbjct: 137 VAKEYDQTQLNILGYTDS---SGSESYNLRLSKIRAIEVGNYLVGQNVEYARVKS-EGIG 192 Query: 317 HHRLKIASDPM--NSANRRIDILV 338 R ++ + NRR++I++ Sbjct: 193 EARPISSNTTAAGRAQNRRVEIIL 216 >gi|39934198|ref|NP_946474.1| OmpA/MotB [Rhodopseudomonas palustris CGA009] gi|192289724|ref|YP_001990329.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris TIE-1] gi|39648046|emb|CAE26566.1| omp16 protein [Rhodopseudomonas palustris CGA009] gi|192283473|gb|ACE99853.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris TIE-1] Length = 165 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ S P+ L K + L +I GH D N L R Sbjct: 57 DRVFFESDQSDLSPQAAATLDKQVQWLQTYSRYTFTIEGHADER---GTREYNIALGARR 113 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A S L+ G+ R+ IS + R +D S NRR Sbjct: 114 AQSVRNYLVSRGIDAQRMRTIS-YGKERPVAVCNDISCWSQNRR 156 >gi|315223848|ref|ZP_07865696.1| inorganic diphosphatase [Capnocytophaga ochracea F0287] gi|314946178|gb|EFS98179.1| inorganic diphosphatase [Capnocytophaga ochracea F0287] Length = 919 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F S + L+ I +L + I + G+TD + N +LS R Sbjct: 811 DRTYFKTGSDELTEGSEQQLKNIVAILKAYPKAAIRLGGYTDNT---GSVEGNKKLSERR 867 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMN--SANRRIDILVEDR 341 A S L+ G ++ ++S G+ +D + NRRIDI + + Sbjct: 868 ANSVLNKLVALGANKAQLSA-QGYGAEHPLCPANDTPECKAKNRRIDIRLTAK 919 >gi|84385674|ref|ZP_00988705.1| Conserved hypothetical outer membrane protein [Vibrio splendidus 12B01] gi|84379654|gb|EAP96506.1| Conserved hypothetical outer membrane protein [Vibrio splendidus 12B01] Length = 212 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 13/154 (8%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 ++++ +L + ++ + + + K + R G+L + F Sbjct: 58 QIEQQSDSSELKQALADQSNLGMNQSGCKTWISNQERHGLLARLH-------FGFDQHNL 110 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P L ++ L + I++ GHTD++ N L L RA + L+ GV Sbjct: 111 SPMGSKALSQLAGELKTNGSAITVDGHTDSTGEAG---YNQALGLQRALTTSDGLVADGV 167 Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 ++R+ I F + ++ + NRR +I Sbjct: 168 EKNRLV-IRSFGESKPIASNATAEGRAKNRRSEI 200 >gi|323435973|ref|ZP_01049351.2| OmpA family protein [Dokdonia donghaensis MED134] gi|321496288|gb|EAQ39323.2| OmpA family protein [Dokdonia donghaensis MED134] Length = 547 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 9/117 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + + +FD S+ + + L + L + E I+I HTDA A N RLS+ Sbjct: 435 KIDNILFDLDSAKIKEISTITLNTVVATLKANPELKIAINAHTDAQ---GSASYNKRLSM 491 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP----MNSANRRIDILVEDRQ 342 RA SA + L+ G+S+DR+S GF +L I N NRRI+ +V ++ Sbjct: 492 RRAASAMEYLLSKGISKDRLSS-QGFGEEQLLINCTSCTPQENELNRRIEFVVISKE 547 >gi|259415100|ref|ZP_05739022.1| OmpA/MotB [Silicibacter sp. TrichCH4B] gi|259349010|gb|EEW60764.1| OmpA/MotB [Silicibacter sp. TrichCH4B] Length = 638 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 87/305 (28%), Gaps = 19/305 (6%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + + T + + + + PE + + + Sbjct: 307 VTLVAAQGTAQGVFDHVVGELESALPQVFVLHAVLPE----PEEKNPDLTPEFTATLSPE 362 Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 V L+ ++ ++ + +N+ + + D + Sbjct: 363 GQVQLRGRLSDNAQRRTVDSYAKARFGSGSVYLATRNAPDLPGVWPIRVLAALDALAQLE 422 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL--- 225 + P L + ++ + + + + ++ Sbjct: 423 RGSVTVTPELVAVRGMSHQENASAEIARMLSDKLGEAEDYELDITYEAPPEPEDQLMAPA 482 Query: 226 -----ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279 ++ I + + F+ S+ ++ V+ KI ++L E + I+GHTD+ Sbjct: 483 LCEAELAAIQRADKIAFEPGSATVAADSARVIDKIAKLLQQCGEIPLEIQGHTDSQ---G 539 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 N LS RA S L + G+ ++ + NRRI+ Sbjct: 540 REEMNLNLSQARAQSVLNALRARRILTGSFVA-KGYGEDNPIASNSTEDGREANRRIEFR 598 Query: 338 VEDRQ 342 + + + Sbjct: 599 LIESE 603 >gi|295135723|ref|YP_003586399.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda SM-A87] gi|294983738|gb|ADF54203.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda SM-A87] Length = 536 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 49/138 (35%), Gaps = 13/138 (9%) Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVI 266 DN+ + + I I N F+ S E VL K+ ++L S I Sbjct: 395 NDNLYSFTRTKYVKKTRQIDIP-HENRIYFEFDKSKVTEEYQEVLDKVIDILKGSDATEI 453 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 I H DA N +LS RA + + L+ G+S + I+ G+ + Sbjct: 454 KIASHADAR---GTEEYNLKLSQRRADATKEYLVAKGISSENITT-KGYGESQPVNDCTE 509 Query: 327 MN-------SANRRIDIL 337 + NRR I Sbjct: 510 ERGCTEAEYAKNRRSVIT 527 >gi|293390327|ref|ZP_06634661.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950861|gb|EFE00980.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans D7S-1] Length = 356 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 16/139 (11%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 ++ + + + F + + P+ L I +A I + G+TD Sbjct: 222 SAPVIAPEVVNKVFNLNSDVTFAFNKANLKPQAQKTLDGISHEIAQVNNANIQVAGYTDR 281 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA-- 330 N +LS RA + L+ GVS+ IS +G+ + D + Sbjct: 282 I---GSDAYNQKLSQRRAETVANYLVSKGVSQQAISA-TGYGKANPVTGNKCDTVKGRKA 337 Query: 331 -------NRRIDILVEDRQ 342 +RR++I V + Sbjct: 338 LIACLADDRRVEIAVNGTK 356 >gi|157368917|ref|YP_001476906.1| OmpA/MotB domain-containing protein [Serratia proteamaculans 568] gi|157320681|gb|ABV39778.1| OmpA/MotB domain protein [Serratia proteamaculans 568] Length = 165 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + PE+ +QK+G L + GHTD N +LSL R Sbjct: 59 DKVLFGNNIGKLNPESTDTVQKMGRALMSVGITQFRLDGHTDNY---GEDSYNDQLSLRR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 A + +L G+ I G + + NRR+ I+V Sbjct: 116 ANAVADLLASVGIPRANIET-RGMGKRDPVADNRTSSGRAENRRVAIVVT 164 >gi|261868250|ref|YP_003256172.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413582|gb|ACX82953.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans D11S-1] Length = 356 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 16/137 (11%) Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 ++ + + + F + + P+ L I +A + + G+TD Sbjct: 224 PVIAPEVVNKVFNLNSDVTFAFNKANLKPQAQKTLDGISHEIAQVNNANVQVAGYTDRI- 282 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---- 330 N +LS RA + L+ GVS+ IS +G+ + D + Sbjct: 283 --GSDAYNQKLSQRRAETVANYLVSKGVSQQAISA-TGYGKANPVTGNKCDTVKGRKALI 339 Query: 331 -----NRRIDILVEDRQ 342 +RR++I V + Sbjct: 340 ACLADDRRVEIAVNGTK 356 >gi|331007788|ref|ZP_08330902.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma proteobacterium IMCC1989] gi|330418397|gb|EGG92949.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma proteobacterium IMCC1989] Length = 171 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 7/108 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + + FD SS ++ +L L + + GH D N L Sbjct: 68 KASVFYFDFDSSALRADSRSLLDAHAAALKAKPRAVRLEGHADER---GTREYNIALGER 124 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336 RA S L+ GV+ ++ + + ++D NRR++I Sbjct: 125 RAQSVRAYLLSRGVTSP--IEVISYGEEKPAANASNDYAWQQNRRVEI 170 >gi|149372358|ref|ZP_01891546.1| outer membrane protein, peptidoglycan-associated lipoprotein [unidentified eubacterium SCB49] gi|149354748|gb|EDM43311.1| outer membrane protein, peptidoglycan-associated lipoprotein [unidentified eubacterium SCB49] Length = 631 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 12/161 (7%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 R + Q +++ + + I I N FD S + Sbjct: 475 RADQQQYQTNELALPDDIQKRKFLDVYLDLRELEHTIGTDIGLLFNPIYFDLDKSFIRSD 534 Query: 248 TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + LQKI +L ++ +R HTD+ N LS RA + L+K+G+ Sbjct: 535 AAIELQKIISLLNQYPQMKIDVRSHTDSR---ADDAYNLDLSDRRAKATIAYLIKNGIDS 591 Query: 307 DRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 R+ G+ +L + + NRR + ++ + Sbjct: 592 SRL-SGRGYGETQLINGCSNGVDCTSIEHQLNRRSEFIIVE 631 >gi|167578636|ref|ZP_02371510.1| hypothetical protein BthaT_10878 [Burkholderia thailandensis TXDOH] gi|167616778|ref|ZP_02385409.1| hypothetical protein BthaB_10778 [Burkholderia thailandensis Bt4] gi|257140710|ref|ZP_05588972.1| hypothetical protein BthaA_16123 [Burkholderia thailandensis E264] Length = 575 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + P+ + ++++G Sbjct: 339 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKAKVRPDFMHNIERLGL 396 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L + + Sbjct: 397 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRATALPGGARAPENAVQ 456 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 457 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 488 >gi|56708795|ref|YP_164836.1| OmpA family protein [Ruegeria pomeroyi DSS-3] gi|56680480|gb|AAV97145.1| OmpA family protein [Ruegeria pomeroyi DSS-3] Length = 180 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S E L++ + I GHTD+ N RLS++RA S Sbjct: 82 FFATDSYRISSEGQARLRQFFQ--ETGANGYIITGHTDSR---ASDAYNLRLSVNRANSV 136 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 +V +G RI + G+ ++ + + NRR++I+ Sbjct: 137 ARVGRATG---ARIVDVRGYGERDPRVPNTSAANMAQNRRVEII 177 >gi|86137204|ref|ZP_01055782.1| OmpA domain protein [Roseobacter sp. MED193] gi|85826528|gb|EAQ46725.1| OmpA domain protein [Roseobacter sp. MED193] Length = 329 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + +F+ + PE I L+ + + ++ + I GHTD+ DN LSL R Sbjct: 221 DGVVFETGAETLSPEAITSLRGLAGFMEEQSKAQVLIVGHTDSV---GGLEDNTSLSLRR 277 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 A L+ + GV+E RI I+G + ++ NRR+++++ R Sbjct: 278 AQMVKDALVSALGVAEGRI-SIAGAGYMAPIASNLTAAGREKNRRVEVVLLAR 329 >gi|332286730|ref|YP_004418641.1| OmpA/MotB [Pusillimonas sp. T7-7] gi|330430683|gb|AEC22017.1| OmpA/MotB [Pusillimonas sp. T7-7] Length = 220 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 10/126 (7%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + E + ++I + FD P + VL + L E G+TD+ Sbjct: 97 VTEMPDGTLRVNI---PSNVSFDTGKYALKPALLPVLDSVARALVQHPELRAKSIGYTDS 153 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 + A+ N LS++RA + L GV ++ G + NR Sbjct: 154 T---GSAQVNQTLSVNRARAVANYLSDKGVPVGNLTA-EGRGPSNPVGDNATAEGRAMNR 209 Query: 333 RIDILV 338 R+++ + Sbjct: 210 RVELYL 215 >gi|167644957|ref|YP_001682620.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31] gi|167347387|gb|ABZ70122.1| OmpA/MotB domain protein [Caulobacter sp. K31] Length = 190 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 8/118 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDN 284 S++ ++ F + PE L L + + I+G TDA + N Sbjct: 77 SVVLSDDSVKFPLNRHELSPEAEQRLADFASKLKGDNKNVYLEIQGFTDA---SGDPQYN 133 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340 L +RA + + L K GV +R++ IS + +D + NRR+ I V Sbjct: 134 ETLGSERAETVRKFLSKQGVPLNRMATIS-YGEDDPVAPNDNPDGRAQNRRVVIQVLA 190 >gi|169632713|ref|YP_001706449.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter baumannii SDF] gi|169151505|emb|CAP00268.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter baumannii] Length = 191 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS E LQ + L + +++ GHTD N L RA + Sbjct: 83 FDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 139 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 L+ SGV+ ++ +S + + NRR++I Sbjct: 140 QNYLITSGVNPQQLEAVS-YGKEAPVNPGHDESAWKENRRVEI 181 >gi|163803132|ref|ZP_02197015.1| putative outer membrane protein OmpA [Vibrio sp. AND4] gi|159173032|gb|EDP57865.1| putative outer membrane protein OmpA [Vibrio sp. AND4] Length = 320 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 45/129 (34%), Gaps = 7/129 (5%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 + V + Q T F S+ + + + I G+ Sbjct: 185 QEVVETRPATNIVDQEYPAQTTTVQFGLESAKLQDASAFNGTVELMN-TYPQAQVEINGY 243 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNS 329 +D + A N +L+ RA + + G++ DR+ + G +++ Sbjct: 244 SDTT---GAAAYNQQLTEKRAQAVAEHFQAEGIAADRM-TVKGMGEANPVASNETRKGRE 299 Query: 330 ANRRIDILV 338 NRR++++V Sbjct: 300 QNRRVEVVV 308 >gi|297518161|ref|ZP_06936547.1| outer membrane protein A [Escherichia coli OP50] Length = 171 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 43 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 99 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 100 ERRAQSVVDYLISKGIPADKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 158 Query: 338 VED 340 V+ Sbjct: 159 VKG 161 >gi|85375533|ref|YP_459595.1| outer membrane protein [Erythrobacter litoralis HTCC2594] gi|84788616|gb|ABC64798.1| outer membrane protein [Erythrobacter litoralis HTCC2594] Length = 231 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 49/145 (33%), Gaps = 10/145 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV E I ++ + F S+ L +I E L Sbjct: 79 DDQIRELDEQTAGSGVDVEEVGDQDAI-LVRLPDGVTFASGSARINSAFYPTLNEIAESL 137 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I + G TD + N +LS RA + L+ GV+ RI G+ Sbjct: 138 KRYPNSLIDVYGFTDTT---GSDALNQQLSESRAQTVADYLVARGVARSRI-ATQGYGER 193 Query: 319 RLK----IASDPMNSANRRIDILVE 339 R A + NRR++I + Sbjct: 194 REYLRIQTADNVNEPLNRRVEIKIT 218 >gi|329114380|ref|ZP_08243142.1| Outer membrane protein [Acetobacter pomorum DM001] gi|326696456|gb|EGE48135.1| Outer membrane protein [Acetobacter pomorum DM001] Length = 452 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 8/112 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF----RNIARDNWRLSL 289 FD S ++ + AH I++ G+TD S + N RLSL Sbjct: 342 VFFDWDKSDLTDRARSIVGVAAQAAAHVALTRITVSGYTDNSSAHPGQKAGEEYNMRLSL 401 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 RA LM+ GV I I G+ + + + + NRR++I+ Sbjct: 402 RRAEVVKAELMRDGVPGTTID-IHGYGETHPLVTTGPNTKEAQNRRVEIIFR 452 >gi|325915795|ref|ZP_08178096.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas vesicatoria ATCC 35937] gi|325537992|gb|EGD09687.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas vesicatoria ATCC 35937] Length = 412 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 59/153 (38%), Gaps = 14/153 (9%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 ++ L+ ++ +T + +S + MF PE ++ +I Sbjct: 268 QVRLKQLLATQQRAGLLSVEEQADGQTRVRLS-----SAAMFASGGVEVEPEQRGLIAQI 322 Query: 256 GEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + + + GHTD P R+ DN+ LS RA + Q+L + R+ + G Sbjct: 323 AAAIDQLPGRVIVVGHTDDVPVRSLRFADNYALSGARAAAVAQLLRTHLATPGRVEAL-G 381 Query: 315 FAHHRLKI-----ASDPMNSANRRIDILVEDRQ 342 + ++ + NRR++IL + + Sbjct: 382 AGDSQPVAQPVQLPAN--RARNRRVEILFQPGE 412 >gi|288801975|ref|ZP_06407416.1| lipoprotein PG3 [Prevotella melaninogenica D18] gi|288335410|gb|EFC73844.1| lipoprotein PG3 [Prevotella melaninogenica D18] Length = 225 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 8/144 (5%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K++ + + + V V + ++ + +F + S L K Sbjct: 74 MDKVAREAAQQLPNARVDKVTDANGLDCVKVTF---DSGILFPLNGSNLSASAKNDLTKF 130 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++ ++ I+G+TDA N LS RA + L GVS +I + G Sbjct: 131 ASLMQRNSNCDVAIQGYTDA---SGNDNINLPLSQRRADAVSSYLKGRGVSSRQIRSVQG 187 Query: 315 FAHHRLKIASDPMNSANRRIDILV 338 F + ++ ANRR+++ + Sbjct: 188 FGSANPI-ENKTISQANRRVEVYL 210 >gi|256026544|ref|ZP_05440378.1| Outer membrane porin F [Fusobacterium sp. D11] Length = 391 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 79/264 (29%), Gaps = 8/264 (3%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N + + DE +R+ VD + ++ + Sbjct: 126 NKSVQTDGKGAGQYTDENVTIQRNEDGSGQYINKVTGVTLQVDAQGEGKYLDEKNKVSFQ 185 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + E ++T + + +E + + Y + K K Sbjct: 186 IGADGTGVYKDEKNNVTVTINEKNATYTSGDITMENNGDGSGTYNDKAKNLLIENDGKGK 245 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPE 247 ++ K L + I + +I + +FD PE Sbjct: 246 AKITFNGKTTEVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDVRPE 305 Query: 248 TIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 VL+ + VL + + I GHTD+ + N LS +RA + L G++ Sbjct: 306 AEEVLKNLAIVLKEADIKAFEIDGHTDSD---AGDKHNQILSENRANAVKNFLTSQGITA 362 Query: 307 DRISKISGFAHHRLKIASDPMNSA 330 + I G+ R ++D Sbjct: 363 E--ITIKGYGKTRPIASNDTPEGK 384 >gi|28900103|ref|NP_799758.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633] gi|260365754|ref|ZP_05778250.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030] gi|260880676|ref|ZP_05893031.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034] gi|260897717|ref|ZP_05906213.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466] gi|260899371|ref|ZP_05907766.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037] gi|28808386|dbj|BAC61591.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633] gi|308086262|gb|EFO35957.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466] gi|308092198|gb|EFO41893.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034] gi|308109307|gb|EFO46847.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037] gi|308114934|gb|EFO52474.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030] Length = 325 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 I G++D + A+ N +L+ RA + G++ DR+ + G +++ Sbjct: 245 ITGYSDTT---GSAQYNQQLTEKRAKAVANEFEAKGIAADRM-TVKGMGEANPVASNETR 300 Query: 327 -MNSANRRIDILV 338 ANRR++++V Sbjct: 301 QGREANRRVEVVV 313 >gi|317151982|ref|YP_004120030.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316942233|gb|ADU61284.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 273 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 17/155 (10%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 +L L +NI + F + R + I+ + +F + VL V A Sbjct: 86 ESLKALKWENIDDDINFRSNRF---VQILSIDASLLFGPDAVTLSESGQAVLDGYMPVFA 142 Query: 261 HSTEVISIRGHTDASPF-------RNIARDN----WRLSLDRAYSAYQVLMKSGVSEDRI 309 + + GHT +N W++SL RA + Y+ L+ G+ + Sbjct: 143 QVQYPLLLAGHTSQLRDELGADYKPGDDEENPDLSWKISLSRALAVYRHLIDRGMRPG-M 201 Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 ++ GF + + NRR+DI+++ R Sbjct: 202 LRVEGFGKYMPFYTQTTVESRARNRRVDIVLDKRN 236 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 2/82 (2%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + W I ++D MT+++ FF+++ ++ D K + Sbjct: 3 KKGKKHICEEMPPWMITFSDVMTLMLTFFVLLVSMSHIDPRRKLVALGSIIGTFGWEDAS 62 Query: 80 SKGIF--DEQNPPERSSQNKID 99 + D + E + D Sbjct: 63 YEVFSKKDTRRTVEPGPIDSGD 84 >gi|213419089|ref|ZP_03352155.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 126 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 41/84 (48%) Query: 31 GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPP 90 GSWKI YADFMT +MAFFLVMW+I+ + I +YF +T I + ++P Sbjct: 1 GSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGNRIANSKSPI 60 Query: 91 ERSSQNKIDLSIDEHITKNSVDLK 114 + + N +LK Sbjct: 61 PGGGDDYTQQQGEVEKQPNIDELK 84 >gi|118588924|ref|ZP_01546331.1| hypothetical protein SIAM614_12768 [Stappia aggregata IAM 12614] gi|118438253|gb|EAV44887.1| hypothetical protein SIAM614_12768 [Stappia aggregata IAM 12614] Length = 234 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 12/106 (11%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDR 291 F+ +S+ P L++ + + I GHTD N RLS DR Sbjct: 129 VSFEYASARLSPSAQANLREFAKGINDPDLAKATFVIEGHTDGI---GSTSYNQRLSEDR 185 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRID 335 A + Q L+ GVS DR+ ++ + R K+A +DP NRR++ Sbjct: 186 AQAVTQFLVNLGVSRDRLKTVA-YGETRPKVADVNDPA---NRRVE 227 >gi|319404756|emb|CBI78357.1| Outer membrane lipoprotein omp16 [Bartonella rochalimae ATCC BAA-1498] Length = 168 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F SS + +L + E L I+I GH D N L R Sbjct: 58 DRVFFSLDSSSIESDAEYILARQAEWLLRYPHYSITIEGHADER---GTREYNLALGQRR 114 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340 A + L+ GVS R++ IS + R + + NRR +++ + Sbjct: 115 AVAVRDHLISLGVSSQRMNTIS-YGKERPVAVCDNISCWNQNRRAVLVINN 164 >gi|156975609|ref|YP_001446516.1| hypothetical protein VIBHAR_03342 [Vibrio harveyi ATCC BAA-1116] gi|156527203|gb|ABU72289.1| hypothetical protein VIBHAR_03342 [Vibrio harveyi ATCC BAA-1116] Length = 230 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 6/108 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F P VL + LA + +++ GHTD N L +RA S Sbjct: 119 FAFDRFNLTPLARDVLSSVARQLAQTDYQVTVEGHTDWI---GTKAYNQTLGHNRAKSTA 175 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L GVSE + + + F ++ S NRR D+ + + Sbjct: 176 RELHYYGVSEQK-TTLKSFGESEPIATNNTSSGRSKNRRADVYIPADE 222 >gi|330947752|gb|EGH48208.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B] Length = 102 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 6/100 (6%) Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 P + +L+ + + + V+ I G+TD++ +DN +LS DRA + VLM GV Sbjct: 1 PPSRTILKVVQFLQINPRRVVRIEGYTDST---GDRQDNLKLSKDRAQAVADVLMDLGVD 57 Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 E RI + G+ A+ + NRR++I+ D +G Sbjct: 58 EKRIH-VEGYGQEFPVNANTSERGRAQNRRVEIVFSDEKG 96 >gi|300723714|ref|YP_003713021.1| putative outer membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297630238|emb|CBJ90889.1| putative outer membrane protein [Xenorhabdus nematophila ATCC 19061] Length = 161 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 7/117 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286 + +F + S PE L+++ VL+ + GHTD N + Sbjct: 49 LFGMSEKVLFGNNQSHLRPEGEAKLKELASVLSKVGIHHARLDGHTDNY---GEVSYNNQ 105 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 LSL RA + L G+ ++ G + + + NRR+ I++ Sbjct: 106 LSLKRANTVADALTDGGMQRANLTT-RGLGPSQPIADNRSSKGRAENRRVAIVITAP 161 >gi|269964170|ref|ZP_06178467.1| outer membrane protein, putative [Vibrio harveyi 1DA3] gi|269831125|gb|EEZ85287.1| outer membrane protein, putative [Vibrio harveyi 1DA3] Length = 205 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 7/111 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S P + ++ L I I+G+ A N LS RA + Sbjct: 83 LFANDSDSINPVFQRKITELAAFLKKYPATSIEIQGYASKV---GTAAYNLELSRRRASN 139 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343 +L+K G+SE R+ I GF L D ++ NRR+ V +G Sbjct: 140 VRNLLIKQGISEKRL-TIVGFGDTHLVQLGTDDVSHALNRRVTATVIGHKG 189 >gi|289207752|ref|YP_003459818.1| peptidoglycan-associated lipoprotein [Thioalkalivibrio sp. K90mix] gi|288943383|gb|ADC71082.1| peptidoglycan-associated lipoprotein [Thioalkalivibrio sp. K90mix] Length = 188 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F+ + + +L+ L+ ++ + + GHTD N L Sbjct: 79 ERLVYFEFDRDEVQSQYMDMLEAHAAYLSQNSGARLRLEGHTDER---GTREYNLGLGER 135 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342 RA S ++L +G S+D+I ++ + ++ + NRR++++ E R+ Sbjct: 136 RAQSVRRILTLNGASDDQI-EVISYGEEMPVAFEQNEEAWAKNRRVELVYESRR 188 >gi|154173933|ref|YP_001408144.1| OmpA/MotB [Campylobacter curvus 525.92] gi|153793024|gb|EAU00162.2| OmpA/MotB [Campylobacter curvus 525.92] Length = 249 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 85/207 (41%), Gaps = 12/207 (5%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + + + + + +E+ + K K + + +L+ Sbjct: 26 ATMDAKKVEAAVGSLAGALSVLEGGARPDNQDDQESELEKQIKKTKGQSTSSQGEFSELS 85 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP-LPETIVVLQKI 255 I ++ L++ + + + + G +I + + +F++ + + + L++I Sbjct: 86 ATIKK-INELLSASGAPEISIDESEDGFIIRL---PSALLFERGKAQIENDDARLFLKRI 141 Query: 256 GEVLAHSTE--VISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 V+A T I I GHTD +I +DNW+LS RA S + ++ +GV R+ Sbjct: 142 AMVIAKLTPDVNIDIVGHTDDQRPDMNSIFKDNWQLSTARAISVVEEMVANGVDARRLIA 201 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDI 336 SG A + ++ + N R++I Sbjct: 202 -SGRASYDPFASNQTPEGRAKNNRVEI 227 >gi|126740854|ref|ZP_01756539.1| OmpA domain protein [Roseobacter sp. SK209-2-6] gi|126718150|gb|EBA14867.1| OmpA domain protein [Roseobacter sp. SK209-2-6] Length = 308 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 68/224 (30%), Gaps = 10/224 (4%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + + + LS+ + K L +E+ +++ E Sbjct: 91 EVVPAPDMLVSLSDYEFLSAAKPLLPGQAEQAQEVVSLLVSHSGYATFLQIIETGPVMED 150 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + D+ + + +L +F S Sbjct: 151 QPPETEPA--ASSPNLSEVSDEEAKPDSGDHQSEALSLSSQLLAEGHVILEGLVFKSGSV 208 Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + L+++ + L E + I GHTD+ N LS RA + L++ Sbjct: 209 RLGQRAVQSLEELAQFLKDHPEARVLIVGHTDSV---GSLASNRSLSERRAEAVRGALIE 265 Query: 302 S-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G+ R+ +G + ++ NRR++ ++ + Sbjct: 266 NSGIDNARVQA-TGVGYAAPIASNLSPAGREKNRRVEAVLLSSK 308 >gi|126642630|ref|YP_001085614.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter baumannii ATCC 17978] Length = 170 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS E LQ + L + +++ GHTD N L RA + Sbjct: 62 FDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 118 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 L+ SGV+ ++ +S + + NRR++I Sbjct: 119 QNYLITSGVNPQQLEAVS-YGKEAPVNPGHDESAWKENRRVEI 160 >gi|260551454|ref|ZP_05825638.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. RUH2624] gi|260405448|gb|EEW98941.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. RUH2624] Length = 191 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS E LQ + L + +++ GHTD N L RA + Sbjct: 83 FDYDSSDLSAEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 139 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 L+ SGV+ ++ +S + + NRR++I Sbjct: 140 QSYLITSGVNPQQLEAVS-YGKEAPVNPGHDESAWKENRRVEI 181 >gi|149188836|ref|ZP_01867126.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1] gi|148837256|gb|EDL54203.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1] Length = 221 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F P L + + LA + +++ GHTD N L + RA + Sbjct: 113 FAFDKYNLTPLAHKTLTGVAKQLAANNFEVTVEGHTDWV---GSDEYNQALGMRRATATA 169 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L +GV ++ + + F ++ + NRR D+ + Sbjct: 170 NELASNGVRKEN-TTLKTFGESEPLASNKTADGRSQNRRSDVYI 212 >gi|83950067|ref|ZP_00958800.1| OmpA family protein [Roseovarius nubinhibens ISM] gi|83837966|gb|EAP77262.1| OmpA family protein [Roseovarius nubinhibens ISM] Length = 220 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ L++ + E + GHTD N L + RA + Sbjct: 75 FAFNSAQLDAGARDTLREQAHWIRQFPEVRFRVYGHTDKVGSHG---YNKALGMARARAV 131 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L G+S R+ ++ F + I ++ NRR Sbjct: 132 VAYLASQGISTSRLEAVASFGETQPLIVTEGRERRNRR 169 >gi|253996272|ref|YP_003048336.1| OmpA/MotB domain-containing protein [Methylotenera mobilis JLW8] gi|253982951|gb|ACT47809.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8] Length = 365 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 14/111 (12%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F + +++ + + ++ + + GHTD N +LS RA Sbjct: 248 LFAFDEAKLKDTSVLDNEVVPKMKENKIFASVKVTGHTDKL---GSEAYNQKLSEKRANQ 304 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDI 336 L+ G+ DR+ + G ++ D + NRR++I Sbjct: 305 VRDYLIAQGIEADRLVAV-GKGELVPVVSCDGVKGRKALIECLAPNRRVEI 354 >gi|332877756|ref|ZP_08445497.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684336|gb|EGJ57192.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 648 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 12/110 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + P+ V L KI EV+ ++ IR HTD+ N +LS RA + Sbjct: 540 FDYNKANIRPDAAVELTKIVEVMREYPKMKIDIRSHTDSR---GADSYNLKLSDRRAKAT 596 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 + ++K G+ R+ G+ RL ++ + NRR + +V Sbjct: 597 LEWIVKQGIDRKRLKA-KGYGETRLVNGCSNGVPCTEEEHQENRRSEFIV 645 >gi|83717203|ref|YP_440080.1| hypothetical protein BTH_II1886 [Burkholderia thailandensis E264] gi|83651028|gb|ABC35092.1| OmpA domain protein [Burkholderia thailandensis E264] Length = 594 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + P+ + ++++G Sbjct: 358 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKAKVRPDFMHNIERLGL 415 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L + + Sbjct: 416 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRATALPGGARAPENAVQ 475 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 476 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 507 >gi|149202108|ref|ZP_01879081.1| OmpA family protein [Roseovarius sp. TM1035] gi|149144206|gb|EDM32237.1| OmpA family protein [Roseovarius sp. TM1035] Length = 179 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 11/139 (7%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + V + +++ N +F S+ L++ + Sbjct: 46 VMDDGAEGYMSPHVTRQGIPVCREVNLCGVVNTDQLFATDSARIHASGQQRLREFFQQAG 105 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + +I GHTD+ N LSL RA S V SG S I+ + G+ Sbjct: 106 AVS--YTIVGHTDSR---ASDEYNMDLSLRRANSVAAVARSSGAS---IADVRGYGERVP 157 Query: 321 KIASDPMN--SANRRIDIL 337 K +++ + NRR++IL Sbjct: 158 KASNNTAEGMAQNRRVEIL 176 >gi|119944462|ref|YP_942142.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37] gi|119863066|gb|ABM02543.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37] Length = 331 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S P+ I L+ I + L E + + GHTD++ N +LS RA Sbjct: 223 FAFDSVKLAPKYIDQLKPIAQQLIKYPEAELIVIGHTDST---GPESYNQQLSERRAALV 279 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 L ++++RI + SG K ++ + NRR+ + Sbjct: 280 ADYLATHFAIAKNRIKE-SGRGELAPKASNATKDGRALNRRVSVF 323 >gi|91224215|ref|ZP_01259478.1| putative outer membrane protein OmpA [Vibrio alginolyticus 12G01] gi|269965628|ref|ZP_06179741.1| putative outer membrane protein OmpA [Vibrio alginolyticus 40B] gi|91191126|gb|EAS77392.1| putative outer membrane protein OmpA [Vibrio alginolyticus 12G01] gi|269829696|gb|EEZ83932.1| putative outer membrane protein OmpA [Vibrio alginolyticus 40B] Length = 326 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 56/140 (40%), Gaps = 11/140 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISII--DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 +V + V+ V+ T I+ + T FD S+ + L +++ Sbjct: 181 EPVVQEKAVEEVVEARPATRIVDHVYPAQTTATVQFDLESAEVKDASN--LSGTVDLMNT 238 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + I G++D + A N +L+ RA + G++ +R+ + G Sbjct: 239 YPQAQVEITGYSDTT---GSAAYNKQLTEKRAKAVADEFQAKGIAAERM-TVKGMGEANP 294 Query: 321 KIASDP--MNSANRRIDILV 338 +++ NRR++++V Sbjct: 295 VASNETRQGRQMNRRVEVVV 314 >gi|51245063|ref|YP_064947.1| outer membrane porin F [precursor] [Desulfotalea psychrophila LSv54] gi|50876100|emb|CAG35940.1| related to outer membrane porin F [Precursor] [Desulfotalea psychrophila LSv54] Length = 241 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 9/107 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD +S+ +L ++ L + I+GHTD+ N +LS RA Sbjct: 133 FDLNSARLRRSAYPLLAELARALEDERVVEHQVCIKGHTDS---AGAGSYNLQLSYSRAN 189 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + L +G+S D++ ++ G+ + + + NRR+++ + Sbjct: 190 AVRDYLAGAGMSVDKL-EVFGYGENMPLVTNSSEANRQLNRRVEVSL 235 >gi|330993344|ref|ZP_08317279.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1] gi|329759374|gb|EGG75883.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1] Length = 368 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290 FD + + ++ + + H I + G+TD + P + N LS+ Sbjct: 259 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTAAHPGPRGQQYNLGLSMR 318 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA S L++ GV + I I G+ + + D NRR++I++ Sbjct: 319 RADSVKAELIRDGVPANAID-IHGYGEAHPLVPTGPDTREPQNRRVEIIL 367 >gi|299769114|ref|YP_003731140.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. DR1] gi|298699202|gb|ADI89767.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. DR1] Length = 186 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS E LQ + L + +++ GHTD N L RA + Sbjct: 78 FDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 134 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 L+ +GV+ ++ +S + A + NRR++I Sbjct: 135 QSYLITNGVNPQQLEAVS-YGKEAPVNAGHDESAWKENRRVEI 176 >gi|319793801|ref|YP_004155441.1| ompa/motb domain protein [Variovorax paradoxus EPS] gi|315596264|gb|ADU37330.1| OmpA/MotB domain protein [Variovorax paradoxus EPS] Length = 215 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 20/168 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ + +K++K + + + L+G +A I IS + + Sbjct: 43 ELATKLEAEVKQRKVEAERLQTLEQALAGPLAAG-----RVTLDNGRIGIS-----GSVL 92 Query: 237 FDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---ARDNWRLSL 289 F +S+ PE +L+ + L E++ + G TD R DNW LS Sbjct: 93 FALNSAELQPEGRQLLKSLAAPLAAYLQARNEMLMVSGFTDDRQVRGGNKQFADNWELSA 152 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 RA + + L++ G+ + + F + ++ S NRR++ Sbjct: 153 QRALTVTRALIEEGIPSSSVFAAA-FGAEQAVASNADADGRSKNRRVE 199 >gi|224532213|ref|ZP_03672845.1| flagellar motor apparatus [Borrelia valaisiana VS116] gi|224511678|gb|EEF82084.1| flagellar motor apparatus [Borrelia valaisiana VS116] Length = 260 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 16/162 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248 Q + ++ + K ++ GI+IS+ FD +S+ ++ Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIIVRQEERGIVISLAAD---AFFDSASADVKLEDNRDS 147 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302 I + VL+ I GHTD + ++NW LS R+ + L +S Sbjct: 148 IQKIASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKNNWELSTARSVNMLEHILNYLDQS 207 Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 V + +++GF R D NRRIDIL+ Sbjct: 208 NVKSIENKFEVAGFGGSRPIATDDTPEGRAYNRRIDILITTD 249 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 17/39 (43%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57 + + + Y D +T+L+ FF+ M+ +N Sbjct: 4 RIKKPLKCDEGSPDYMVTYGDMVTLLLVFFVTMFSLNDI 42 >gi|113474200|ref|YP_720261.1| OmpA/MotB [Trichodesmium erythraeum IMS101] gi|110165248|gb|ABG49788.1| OmpA/MotB [Trichodesmium erythraeum IMS101] Length = 246 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 82/249 (32%), Gaps = 7/249 (2%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 ++ + N K + + + + + +E K Sbjct: 1 MAIAFQYPSTSQKVPIAEKLLNNFKSRVSEKQLPLVSTTPPAPILETIKPRVQLTEAEKI 60 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 ++ + + + K+ + L+ I+ L+ + N K Sbjct: 61 ELETELKQLQAQLKTLIVRTTAIENKLNITRGDIDLETRLNIIAQELAAPPSANKNKQRN 120 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275 ++ ++ + +F+ S+ + V++ + L + + +IS+ G+TD Sbjct: 121 QYSSPVLTKADMVTLPSDILFESGSNKIRFDGRVIVDNLIRELRNYQDVIISVSGYTDNR 180 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRR 333 A+ N S +A + L K R+ I G+ R +D NRR Sbjct: 181 ---GKAKVNLEKSFLQAEVIAEYLSKKLGQGYRLLAI-GYGESRPIAENDSQTNRQRNRR 236 Query: 334 IDILVEDRQ 342 I++ V R+ Sbjct: 237 IEVKVHLRK 245 >gi|294626797|ref|ZP_06705390.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598913|gb|EFF43057.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 419 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 10/148 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + LS +++ +T + +S + MF P+ V+ +I Sbjct: 278 LKQLLSAQERAGLLRVDEQADGQTRVRLS-----SAAMFASGGVEVEPQQRGVIAQIAAA 332 Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + + + GHTD P R+ +DN+ LS RA + QVL + R+ +G Sbjct: 333 IEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVEA-TGAGD 391 Query: 318 HRLKIAS---DPMNSANRRIDILVEDRQ 342 + + NRR++IL + + Sbjct: 392 SQPIAQPVQLPANRARNRRVEILFQPGE 419 >gi|114778503|ref|ZP_01453347.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1] gi|114551228|gb|EAU53787.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1] Length = 325 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 8/140 (5%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + + + + GI + FD S I ++ + +I +L + Sbjct: 188 VVEVEPMQQEMVFIKAKDLANGITQQGHIALHQIHFDTDSDIIKADSRPAIDQIALMLKN 247 Query: 262 STEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHR 319 + ++ I GHTD + N LS RA + L G+ R+ G + Sbjct: 248 NPDLKIILVGHTDNQ---GDLQYNMDLSQRRAKAVMNSLESDYGIKRARLGAA-GIGYLA 303 Query: 320 LKIASDPM--NSANRRIDIL 337 ++ + NRR++I+ Sbjct: 304 PIASNRSAEGRAENRRVEII 323 >gi|78224682|ref|YP_386429.1| OmpA/MotB [Geobacter metallireducens GS-15] gi|78195937|gb|ABB33704.1| OmpA/MotB [Geobacter metallireducens GS-15] Length = 194 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 63/173 (36%), Gaps = 9/173 (5%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 ++ +P S + A K ++D K D +G T + Sbjct: 29 KDEMVPVASNKTAQAAVAKPAVKDGGIKTPPAKEVQSKDQSKEGAA---KGTMTEAQLQA 85 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 F+ SS+ E L K E+L ++ + I G+ D N L Sbjct: 86 ALTKIFFNFDSSVLSSEGRETLVKNAELLKSASFKVRIEGNCDER---GSDEYNLALGER 142 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 RA +A + L+ GV DR+S IS + + + + NRR + +V + Sbjct: 143 RAQAAMKYLLTMGVPADRLSIIS-YGEEKPADPGHDEAAWAKNRRDEFVVMVK 194 >gi|311695186|gb|ADP98059.1| flagellar motor protein MotD [marine bacterium HP15] Length = 260 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 67/188 (35%), Gaps = 5/188 (2%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + + S + ++ + E + M + R + L Sbjct: 55 GVFNAPQRSFQPIEIGDQPQRSLNAPAENVIPPAVTEAPRNPEMDAQARTEALRAMADQL 114 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 V ET+ + +++ N+ +F + P + V++KI VL + Sbjct: 115 SMEFDELINQGVVSLETSDQWLELNL---PNSLLFGSGDAEPHYDAFEVVEKIATVLNNR 171 Query: 263 TEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 + + G TD P NW LS RA + ++L+ G+ +R++ + G+ ++ Sbjct: 172 DNAVKVEGFTDNQPISTSRFPSNWELSAARAAAMVRMLVMEGIEPERLAAV-GYGQYQPV 230 Query: 322 IASDPMNS 329 +D Sbjct: 231 SRNDTEEG 238 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 62/135 (45%), Gaps = 1/135 (0%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 ++++ D +N W I YADF+T+L AFF+VM+ +++ ++ K + + Sbjct: 1 MRRRRQPQDDLHNKERWLISYADFITLLFAFFVVMYSVSSVNEGKYKVLSETLTGVFNAP 60 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 + + I + + P+RS + I +T+ + ++ + + + + + + + + Sbjct: 61 QRSFQPI-EIGDQPQRSLNAPAENVIPPAVTEAPRNPEMDAQARTEALRAMADQLSMEFD 119 Query: 137 SQQSEHCKNSLTRDS 151 ++ + T D Sbjct: 120 ELINQGVVSLETSDQ 134 >gi|116620375|ref|YP_822531.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116223537|gb|ABJ82246.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 237 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 5/153 (3%) Query: 192 LQDLAKKISSTLSG-LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L D+ +K+ L + V F T G+ I +++ F S P Sbjct: 81 LLDIRRKLEEALRAMPEFSKLRDNVKFSVTGEGLRIDLLENDQGMFFVSGSPAPTRAGEE 140 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIA----RDNWRLSLDRAYSAYQVLMKSGVSE 306 +L+ + + + I GHTDA PFRN NW L+ DRA +A ++L GV Sbjct: 141 LLRVLAREIGRLPNSLVIEGHTDAKPFRNARPAEGYSNWELAADRANAARRLLHLFGVRP 200 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +++ ++ GFA + D ++ NRR+ ++V+ Sbjct: 201 EQVVEVRGFADQKPFNERDRFDARNRRVSVVVK 233 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 + + G+WK+ YADF+T LMA F+V+W++N++ +I YF T Sbjct: 4 RFRPAPGHRSGSGAWKVAYADFVTALMALFIVLWLMNSSTKVK-SSISGYFRDPRGFTRT 62 Query: 79 ASKGIFDEQNPPERSSQNKID 99 G + + +D Sbjct: 63 LGAGPANSGEGLSLRTDGLLD 83 >gi|332881152|ref|ZP_08448812.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680901|gb|EGJ53838.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 920 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F + + L+ I +L + I + G+TD + A N +LS R Sbjct: 812 DRTYFKTGNDELTEGSEQQLKNIVAILKAYPKAAIRLGGYTDNT---GSAEGNLKLSERR 868 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMN--SANRRIDILVEDR 341 A S L+ G ++ ++S G+ +D + NRRID+ + + Sbjct: 869 ANSVLNKLVALGANKAQLSA-QGYGAEHPICPANDTDECKAKNRRIDVRLTAK 920 >gi|300772840|ref|ZP_07082709.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861] gi|300759011|gb|EFK55838.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861] Length = 655 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 12/116 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +D + +L ++ L + I + HTD+ + N +LS +R Sbjct: 543 ENIYYDLDKYNIRADAKPILNQLVNTLRDNPTLKIELSSHTDSRATH---KYNMKLSQNR 599 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 A +A ++ G++ DRI G+ RL SD + ANRR +I V + Sbjct: 600 AQAAVDYIVSRGIARDRIVA-KGYGETRLVNKCADGVKCSDEEHQANRRTEIKVLE 654 >gi|124003926|ref|ZP_01688773.1| OmpA family protein [Microscilla marina ATCC 23134] gi|123990505|gb|EAY29985.1| OmpA family protein [Microscilla marina ATCC 23134] Length = 489 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 6/111 (5%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ + + L ++ VL E+ + I+GHT +N +LS DRA Sbjct: 381 VYFEYKKNYLINPAKAYLNQVVNVLKKYPEIELEIQGHTCD--ISQSEANNQQLSEDRAQ 438 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 L+K+G++ R++ +GF + +D NRR+ V + Sbjct: 439 KVKAYLVKNGINAQRLTT-TGFGSKQPAFPNDDYYNRVRNRRVQFKVVKDK 488 >gi|24375803|ref|NP_719846.1| OmpA family protein [Shewanella oneidensis MR-1] gi|24350753|gb|AAN57290.1|AE015865_4 OmpA family protein [Shewanella oneidensis MR-1] Length = 201 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + +F +S+ PE ++++ L +I GHT + N LS Sbjct: 74 KEINVLFPNNSAYIAPEYYPQIEEVAIFLRQYPTTKVTIEGHTSRT---GTDETNKELSQ 130 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 +RA + VL + G+ R++ I G+ R + + NRR+ Sbjct: 131 ERANAVTAVLAERFGIDRSRLTAI-GYGSSRPIVLEQTPEAEIRNRRV 177 >gi|289764553|ref|ZP_06523931.1| outer membrane porin F [Fusobacterium sp. D11] gi|289716108|gb|EFD80120.1| outer membrane porin F [Fusobacterium sp. D11] Length = 311 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 79/264 (29%), Gaps = 8/264 (3%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N + + DE +R+ VD + ++ + Sbjct: 46 NKSVQTDGKGAGQYTDENVTIQRNEDGSGQYINKVTGVTLQVDAQGEGKYLDEKNKVSFQ 105 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + E ++T + + +E + + Y + K K Sbjct: 106 IGADGTGVYKDEKNNVTVTINEKNATYTSGDITMENNGDGSGTYNDKAKNLLIENDGKGK 165 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSIPLPE 247 ++ K L + I + +I + +FD PE Sbjct: 166 AKITFNGKTTEVDAKPLEKPEKFPKLKMVPPVPSIEANSLLITLDSGILFDVDKYDVRPE 225 Query: 248 TIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 VL+ + VL + + I GHTD+ + N LS +RA + L G++ Sbjct: 226 AEEVLKNLAIVLKEADIKAFEIDGHTDSD---AGDKHNQILSENRANAVKNFLTSQGITA 282 Query: 307 DRISKISGFAHHRLKIASDPMNSA 330 + I G+ R ++D Sbjct: 283 E--ITIKGYGKTRPIASNDTPEGK 304 >gi|157736518|ref|YP_001489201.1| OmpA domain-containing protein [Arcobacter butzleri RM4018] gi|315635678|ref|ZP_07890941.1| OmpA domain protein [Arcobacter butzleri JV22] gi|157698372|gb|ABV66532.1| OmpA domain protein [Arcobacter butzleri RM4018] gi|315479975|gb|EFU70645.1| OmpA domain protein [Arcobacter butzleri JV22] Length = 241 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 69/159 (43%), Gaps = 13/159 (8%) Query: 189 KKRLQDLAKKISSTLSGLVADNI--VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 K+ Q++A+ +++ ++ + + ++ T + I D MF+ +S+ P Sbjct: 83 DKQAQEVAQSLNTNVNNNPQAVLDPNQDLIVSNTDNYVKIMFRDSM---MFETNSANPTY 139 Query: 247 ETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + KI VL + + GHTD+ N LS RA + ++ SGVS Sbjct: 140 SAQTKISKIYSVLQKYPNTLVQVVGHTDSR---GTHTYNQTLSEQRATNVGNIIYNSGVS 196 Query: 306 EDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 ++I G + + ++ + + NRR+++ + Q Sbjct: 197 -NQIFS-RGCSFDKPVALNNSESNMALNRRVEVYLYPNQ 233 >gi|62901665|gb|AAY18798.1| OmpA [Cronobacter sakazakii] Length = 347 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 219 KSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 275 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ ++IS G + +A +RR++I Sbjct: 276 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKARAALIDCLGPDRRVEIE 334 Query: 338 VED 340 V+ Sbjct: 335 VKG 337 >gi|326402347|ref|YP_004282428.1| putative outer membrane protein [Acidiphilium multivorum AIU301] gi|325049208|dbj|BAJ79546.1| putative outer membrane protein [Acidiphilium multivorum AIU301] Length = 361 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 7/107 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ + P ++ + + + +++ G+TD N +LSL RA+ Sbjct: 258 VFFNWDKANLTPRAQQIVSEAAKASQTTKVTRLNVNGYTDT---SGAPAYNMKLSLRRAH 314 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + L+ GVS++ I I G+ L + + P NRR++I++ Sbjct: 315 NVAAQLVADGVSKNDIV-IKGYGETHLLVPTGPNVREPQNRRVEIIL 360 >gi|312130253|ref|YP_003997593.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132] gi|311906799|gb|ADQ17240.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132] Length = 657 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 8/112 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + +D + P+ + L K+ ++L + I + HTDA N RLS Sbjct: 542 RLENIYYDLDKADIRPDAAIELDKLVQILKDNPGLKIELGSHTDAR---ASEIYNLRLSQ 598 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS---DPMNSANRRIDILV 338 RA SA ++ G+S +R+ G+ L I + + + NRR + V Sbjct: 599 RRAESAINYIVNKGISRERLEA-RGYGESELIIPNAKTEAEHQQNRRTEFKV 649 >gi|288958638|ref|YP_003448979.1| ompA-family protein [Azospirillum sp. B510] gi|288910946|dbj|BAI72435.1| ompA-family protein [Azospirillum sp. B510] Length = 502 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSA 295 F S P + + + + E L IS+ G+TD+ R+ N LS RA+ Sbjct: 391 FASGSDRIEPRYVELFRHVAEALRPEQGRISVIGNTDSVAIRSTRYRSNQELSEARAFRV 450 Query: 296 YQVLMK-SGVSEDR----ISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +++ G R G + NRR+DI++ Sbjct: 451 QRLMTDILGKDAGRDGGSRLSAEGRGDGDPIAPNTTAEGRQANRRVDIVL 500 >gi|254448733|ref|ZP_05062191.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015] gi|198261741|gb|EDY86028.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015] Length = 207 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + F S E VL + LA + +V + GHTD N LS Sbjct: 94 SKRMVFFAFDSDQVKEEFNDVLIAHAKYLASNPDVSVRLEGHTDER---GTREYNLALSE 150 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + Q LM G + ++ + GF + NRR +++ Sbjct: 151 RRAKAVRQFLMLYGAPAESVN-VYGFGEELPLALGSTEEAYAENRRAELV 199 >gi|148259194|ref|YP_001233321.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5] gi|146400875|gb|ABQ29402.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5] Length = 361 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 7/107 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ + P ++ + + + +++ G+TD N +LSL RA+ Sbjct: 258 VFFNWDKANLTPRAQQIVSEAAKASQTTKVTRLNVNGYTDT---SGAPAYNMKLSLRRAH 314 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + L+ GVS++ I I G+ L + + P NRR++I++ Sbjct: 315 NVAAQLVADGVSKNDIV-IKGYGETHLLVPTGPNVREPQNRRVEIIL 360 >gi|148259193|ref|YP_001233320.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5] gi|326402346|ref|YP_004282427.1| putative outer membrane protein [Acidiphilium multivorum AIU301] gi|146400874|gb|ABQ29401.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5] gi|325049207|dbj|BAJ79545.1| putative outer membrane protein [Acidiphilium multivorum AIU301] Length = 364 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 7/107 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ + P ++ + + + +++ G+TD N +LSL RA+ Sbjct: 261 VFFNWDKANLTPRAQQIVSEAAKASQTTKVTRLNVNGYTDT---SGAPAYNMKLSLRRAH 317 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + L+ GVS++ I I G+ L + + P NRR++I++ Sbjct: 318 NVAAQLVADGVSKNDIV-IKGYGETHLLVPTGPNVREPQNRRVEIIL 363 >gi|224534343|ref|ZP_03674921.1| flagellar motor apparatus [Borrelia spielmanii A14S] gi|224514445|gb|EEF84761.1| flagellar motor apparatus [Borrelia spielmanii A14S] Length = 260 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 16/162 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248 Q + ++ + K ++ GI+IS+ FD +S+ ++ Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIMVRMEERGIVISLAAD---AFFDSASADVKLEDNRDS 147 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302 I + VL+ I GHTD + + NW LS+ R+ + L +S Sbjct: 148 IQKIASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKSNWELSVARSVNMLEHILNYLDQS 207 Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 V+ + ++SGF R D NRRIDIL+ Sbjct: 208 NVTSVENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 17/39 (43%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57 + + + Y D +T+L+ FF+ M+ +N Sbjct: 4 RTKKPLKCDEGAPDYMLTYGDMVTLLLVFFVTMFSLNDI 42 >gi|13472168|ref|NP_103735.1| hypothetical protein mll2374 [Mesorhizobium loti MAFF303099] gi|14022913|dbj|BAB49521.1| mll2374 [Mesorhizobium loti MAFF303099] Length = 366 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 7/115 (6%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 +++ + F +S+ ++ +L ++ V+ + + G+TD+ Sbjct: 249 RFAVLSRTGAIYFRPASARLDAKSRPLLTEVEGVVGKCPTLKVEVSGYTDSD---GSPEA 305 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 N LS RA + + L+ GV +IS G A+D + NRRI+ Sbjct: 306 NKALSERRAQAVAEALVAGGVPRQQISAA-GHGEENPVAANDTPKNKALNRRIEF 359 >gi|294651528|ref|ZP_06728837.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194] gi|292822551|gb|EFF81445.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194] Length = 160 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 +FD + S PE + ++ + L + + I GHTD N +LS + Sbjct: 53 PERLLFDFNKSDIKPEHANEIARLAKQLNKYDLQKLKIVGHTDDV---GNPEYNQKLSEE 109 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA S + + G ++ + + G + + + ++NRR+ +++ Sbjct: 110 RAQSVSMIFVNEGFKQNNL-TVIGRGSSQPYLPNTSEENRASNRRVAVII 158 >gi|82523863|emb|CAI78811.1| outer membrane protein and related peptidoglycan-associated [uncultured candidate division WS3 bacterium] Length = 192 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 55/176 (31%), Gaps = 15/176 (8%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + P + M L + S D++ K + Sbjct: 18 AAVGCGKKPEPATDLDMAARMSSADSLDASDTDLESAEGLSRFDDLFKKKPAAEEIETVE 77 Query: 226 -----ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279 + ++D + F+ + +L + + + E I I GH D+ Sbjct: 78 TKPAPVLVMDDIH---FEFDKYTLTADARRMLAQTAKAMKEMPEVRIQIEGHCDSR---G 131 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333 N L RA +A L+ G+ R+S IS F R ++ + NRR Sbjct: 132 TQEYNLALGQRRAQAAKDYLVNLGIDAARVSIIS-FGEERPLDPRENEEAWAKNRR 186 >gi|83941258|ref|ZP_00953720.1| OmpA family protein [Sulfitobacter sp. EE-36] gi|83847078|gb|EAP84953.1| OmpA family protein [Sulfitobacter sp. EE-36] Length = 191 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 22/174 (12%) Query: 178 LSKEKILAMKRKKRLQDLAKKISST-----------LSGLVADNIVKGVLFETTRTGILI 226 L A R ++ +D + I + + + V + Sbjct: 23 LQASAADAQTRSQQGRDKGQYIPTIWVDPDGCEHWVMDDGAEGYMTPHVTRQGIPVCRRG 82 Query: 227 SIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 ++ N F+ S P+ L + + + I GHTD+ N Sbjct: 83 NVCGVMNTDQFFNTDSYRVHPQGRARLAEFFKTTGAVS--YIISGHTDSR---ASDAYNM 137 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 +LSL+RA + + +SG RI+ + G+ ++ + NRR++I+ Sbjct: 138 KLSLNRANAVASIAQQSG---ARIADVRGYGERMPAASNGTAGGMAKNRRVEII 188 >gi|120435916|ref|YP_861602.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] gi|117578066|emb|CAL66535.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] Length = 281 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 79/210 (37%), Gaps = 13/210 (6%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + + + K L + +N +K K K AK + Sbjct: 53 ARIEERVADYNAKINSLRTENEGMMEMNDLTVMSKNTKNKMKNTIAKMDPEKVKGAKTLE 112 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQ------RNTPMFDKSSSIPLPETIVVLQK 254 +++ V+ N+ + + I IS+ + + +F S E +L+K Sbjct: 113 DSINLAVSYNLKQNISEGADEDDIDISVDETVVMINVSDKLLFGSGSYRVTGEAQPLLKK 172 Query: 255 IGEVLA-HSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLM-KSGVSEDRIS 310 + EV+ + I GHTD + DNW LS+ RA S +VL K V ++ Sbjct: 173 LAEVINSEPAMEVMIEGHTDDRTMVTESYLKDNWDLSVRRATSIVRVLQDKYNVEPSKLI 232 Query: 311 KISGFAHHRLKI--ASDPMNSANRRIDILV 338 G + ++ + ++ + NRR I++ Sbjct: 233 AA-GRSSYQPLVENSNKDNMAKNRRTRIVI 261 >gi|222149664|ref|YP_002550621.1| peptidoglycan-associated lipoprotein [Agrobacterium vitis S4] gi|221736646|gb|ACM37609.1| peptidoglycan-associated lipoprotein [Agrobacterium vitis S4] Length = 177 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD S+ + L + + L ++ I++ GH D N L R Sbjct: 68 DRIFFDTDSTSIRADAQQTLDRQAQWLQRYSQYPITVEGHADER---GTREYNLALGARR 124 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRR 333 A S L+ G+ +RI IS + R D S NRR Sbjct: 125 AASTKAYLVSRGIPANRIKTIS-YGKERPVATCDDISCWSQNRR 167 >gi|313201413|ref|YP_004040071.1| ompa/motb domain-containing protein [Methylovorus sp. MP688] gi|312440729|gb|ADQ84835.1| OmpA/MotB domain protein [Methylovorus sp. MP688] Length = 356 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 17/122 (13%) Query: 232 RNTPMFDKSSSIPLPETIVVLQ-KIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLS 288 ++ +F E VL + E + EV + I GHTD N +LS Sbjct: 236 QSEVLFGFDKDNLKEEGKKVLNADVVEKMKAHPEVELVLITGHTDRI---GDEAYNQKLS 292 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRR--IDILV 338 RA + + L+ G+ R+ + G + + NRR ++I V Sbjct: 293 ERRANAVKKYLVSQGIEASRLHAV-GKGEAEPVVDCQGVRGKKAIACLQPNRRVVVEIEV 351 Query: 339 ED 340 + Sbjct: 352 QR 353 >gi|312130358|ref|YP_003997698.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132] gi|311906904|gb|ADQ17345.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132] Length = 444 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +S PE+ V+++I VL ++ + I GHTD+ + N LS RA S Sbjct: 342 FDVNSDKIKPESYGVIKEIATVLQENSGIRVKIVGHTDSD---GDDKSNLTLSQKRAASV 398 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 L + +R+ G + NRR++ + Sbjct: 399 KNFLTSEFKIDAERLET-EGKGESEPSEPNTTPQGKANNRRVEFI 442 >gi|332664792|ref|YP_004447580.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332333606|gb|AEE50707.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 256 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 7/212 (3%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + + + ++ DL + EK+ E L + ++ Sbjct: 32 SKEAADKALAETQTKVANLEKENTDLKTQLEAEKTRLNGEIANLRKDLDATKGQISAVQQ 91 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIV 250 D+++ + + V T + + PM + S Sbjct: 92 KLDMSQAELTKVKNEVNGIFSAYKSSGLTAEERDGRLYLMTSAPMDYKTGSYALSKAQRE 151 Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD--NWRLSLDRAYSAYQVLMKSGVSED 307 + ++ L + + I + GHTD+ R A NW LS R+ + + L+K+GVS Sbjct: 152 AVAQLATTLKSNPKLKILVEGHTDSDKVRGGAAYQDNWELSSKRSLAICRELIKNGVSPA 211 Query: 308 RISKISGFAHHRLKIASDPMN--SANRRIDIL 337 +++ + G K + +ANRR D++ Sbjct: 212 QVATV-GRGETMPKADNSTKEGKAANRRSDVV 242 >gi|166714357|gb|ABY87945.1| outer membrane protein [Acinetobacter sp. bm-8] Length = 355 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 8/127 (6%) Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278 +I ++ FD + S + + K+ E L I GHTD + Sbjct: 221 QEPQEVIEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLNEYPNATARIEGHTDNT--- 277 Query: 279 NIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 + N RLSL RA S L+ + + R+ GFA + ++ NRR+ Sbjct: 278 GPRKLNERLSLARANSVKSALVSEYNIDSSRL-AAQGFAWDQPIADNNTKEGRAMNRRVF 336 Query: 336 ILVEDRQ 342 + + Sbjct: 337 ATITGSR 343 >gi|225164037|ref|ZP_03726322.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2] gi|224801343|gb|EEG19654.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2] Length = 253 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 71/179 (39%), Gaps = 4/179 (2%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 K P + + L LA+++ L+ L + + T G Sbjct: 67 RPETGKSSGEKDNPGTGLTDQKAVDLEYLNKLARELYRLLN-LDESRTDNPIDIQVTSDG 125 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA---SPFRNI 280 + + + D+ P+F + V+ + ++ ++I GHT A R Sbjct: 126 LRVILYDRNGRPLFVDRGTELTEWGRFVMDNLAWLIDRDHFYVTIEGHTRAGLTLDDRPS 185 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + W LS DRA ++ + L + VS I ++ G+A R + +D + +N+R+ + + Sbjct: 186 SYTLWELSADRANASRRALTEHVVSPALIERVVGYADTRPLLDTDATSESNQRVTLSLR 244 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 G+WK+ YADF+T +MA F+V+W I+A D + +YF K L+ A+ G+ + Sbjct: 8 SGAWKVAYADFVTAMMALFMVLW-ISAQDHQILISTARYFQAPTKPLLNAAAGVMPMEKF 66 Query: 90 PERSSQNKIDLS 101 + ++ + Sbjct: 67 RPETGKSSGEKD 78 >gi|254460338|ref|ZP_05073754.1| OmpA domain protein [Rhodobacterales bacterium HTCC2083] gi|206676927|gb|EDZ41414.1| OmpA domain protein [Rhodobacteraceae bacterium HTCC2083] Length = 594 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 37/316 (11%), Positives = 84/316 (26%), Gaps = 20/316 (6%) Query: 35 IVYADF-MTVLMAFFLVMWIINATDDDTKKAIEQYFNP--FGKNLMTASKGIFDEQNPPE 91 + +AD +T + TD + + + + + Sbjct: 258 VTFADADIT--------LVADEGTDQSLFDRVVGELETGLPEVFALETVLPVIPDASQGP 309 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 + + + T R + Y ++ ++ R Sbjct: 310 PEFIATLSPEGQVQLRGRVNSKLVRDTADSYAKARFGSGEVYTASRIDESLPRDWSVRVL 369 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + L + ++ E+ + + L+ L ++ + Sbjct: 370 AAIETLSMLKNGSVTVTPEKVRVFGDTGVPSAKSDITRLLLEKLGDSKDLSIEVTYKKKL 429 Query: 212 VKGVLFETTRTG-ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--I 268 + T + ++ I F+ S +L + E+L + + I Sbjct: 430 DPVLGLPTADECEVQVTEIQSGRKITFEPGSGNLDASAESILDDMAEILIKCPDDMRMEI 489 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 G+TD+ N LS RA + L + V R G+ + Sbjct: 490 SGYTDSQ---GREVMNQELSQTRAQAVLTALRERRVLMSRYVA-KGYGEENPIGDNSTEA 545 Query: 329 SA--NRRIDILVEDRQ 342 NRRI+ + + Sbjct: 546 GREANRRIEFKLIRPE 561 >gi|270263877|ref|ZP_06192145.1| OmpA/MotB domain-containing protein [Serratia odorifera 4Rx13] gi|270042070|gb|EFA15166.1| OmpA/MotB domain-containing protein [Serratia odorifera 4Rx13] Length = 165 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + PE+ +QK+G L + GHTD N +LSL R Sbjct: 59 DKVLFGNNIGKLNPESTETVQKMGRALMSVGITKFRLDGHTDNY---GEDSYNDQLSLRR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 A + +L G+ I G + + NRR+ I+V Sbjct: 116 ANAVADLLASVGIPRANIET-RGMGKRDPVADNRTSSGRAENRRVAIVVT 164 >gi|253999390|ref|YP_003051453.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4] gi|253986069|gb|ACT50926.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4] Length = 356 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 17/122 (13%) Query: 232 RNTPMFDKSSSIPLPETIVVLQ-KIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLS 288 ++ +F E VL + E + EV + I GHTD N +LS Sbjct: 236 QSEVLFGFDKDNLKEEGKKVLNADVVEKMKAHPEVELVLITGHTDRI---GDEAYNQKLS 292 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRR--IDILV 338 RA + + L+ G+ R+ + G + + NRR ++I V Sbjct: 293 ERRANAVKKYLVSQGIEASRLHAV-GKGEAEPVVDCQGVRGKKAIACLQPNRRVVVEIEV 351 Query: 339 ED 340 + Sbjct: 352 QR 353 >gi|315187219|gb|EFU20976.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578] Length = 430 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++ LP L + E L + + + GHT + LS+ RA + Sbjct: 327 FLPDQAVLLPGEEAKLDILAEALKKAPDRTILVVGHTADV---GKPQGQMALSVARAKTI 383 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + L+K G+ DR+ + G + NRR++I + + Sbjct: 384 VEELVKRGIEPDRLIYL-GKGGTEPVAPNHTEEGRRLNRRVEIFLLED 430 >gi|242277549|ref|YP_002989678.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] gi|242120443|gb|ACS78139.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] Length = 172 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 10/107 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293 F +S+ + V+ +G L + GHTD+ + N LSL RA Sbjct: 49 FKVNSAKISEKANPVVDSLGVALTSGPGQSMQVRLVGHTDS---AGKSEYNRSLSLKRAE 105 Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDIL 337 S L + + RI ++ G + +++ + NRR++++ Sbjct: 106 SVRNYLAVHFNIDPARI-EVQGMGEDQPIASNENAQGRAQNRRVEVI 151 >gi|126736947|ref|ZP_01752682.1| OmpA family protein [Roseobacter sp. SK209-2-6] gi|126721532|gb|EBA18235.1| OmpA family protein [Roseobacter sp. SK209-2-6] Length = 187 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 11/139 (7%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + V + +I F L++ + Sbjct: 54 AMDDGAEGYMTPHVTRDGKPVCRRGNICGVMPTDQFFATDRHAINAAGQQRLKEFFQ--K 111 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + I GHTD+ N RLS RA + +V G RI ++ G+ Sbjct: 112 ANARAFIISGHTDSR---ASDEYNMRLSERRANAVARVGNSIG---ARIIEVRGYGERDP 165 Query: 321 KIASDPMN--SANRRIDIL 337 + ++ + NRR++I+ Sbjct: 166 RKPNNSAANMAENRRVEII 184 >gi|90577941|ref|ZP_01233752.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14] gi|90441027|gb|EAS66207.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14] Length = 347 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 7/101 (6%) Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 E LQ + + L + + G+T + N +LS RA + + Sbjct: 227 DGKHLTQEDKQRLQPMIQRLTRYPSATVEVTGYTSNT---GSVAYNQKLSEKRAKNVADL 283 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L + +I+ G +D + NRR++I Sbjct: 284 LSQYVADASQITA-KGMGEANPIATNDTAKGRAENRRVEIY 323 >gi|203287740|ref|YP_002222755.1| flagellar motor rotation protein B [Borrelia recurrentis A1] gi|201084960|gb|ACH94534.1| flagellar motor rotation protein B [Borrelia recurrentis A1] Length = 262 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 59/167 (35%), Gaps = 18/167 (10%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL--- 245 K Q + ++ V V+ G+++S++ FD +S+ Sbjct: 89 AKNKQASQASKNKSIIEFVEKIQSNKVIVRRHERGVVVSLLAD---AFFDSASAEVKLDD 145 Query: 246 -PETIVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + I + L + I GHTD I + NW LS RA + + ++ Sbjct: 146 NRDVIQKIASFIGFLDNQGYNFKIEGHTDNVDVNINGIWKSNWELSSARAVNMLEQILNY 205 Query: 303 GVSEDRISK------ISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 +I +SGFA R D NRRIDIL+ Sbjct: 206 -TDHSKIESIESKFEVSGFAGSRPVATDDTPEGRAYNRRIDILITSD 251 >gi|312129756|ref|YP_003997096.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132] gi|311906302|gb|ADQ16743.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132] Length = 800 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 90/292 (30%), Gaps = 12/292 (4%) Query: 55 NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 + + T + I+ Y ++Q P + + + + Sbjct: 514 SGLQEYTFQFIDDYTKEKIVVKSLFVNNAANKQVPLNSTEDGFKATFLPNAALDLKFEAE 573 Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSE-HCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 T K + ++ SLT + + + K+I Sbjct: 574 GYETKSLKVAAFNGEPLALRKSTYPLALKFTPSLTEEQSNKAKIVITQGKSKTIKGTWED 633 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + L + + + + I S VA L + ++ Sbjct: 634 GVYHLLTDPAQLLDMEINVPGYHPYIGSLNRSQVAQMEANITLTPLPTAPEKMEAKVGKS 693 Query: 234 TPM----FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 + F++S + LP + L ++ + + I I GHT+ R N RLS Sbjct: 694 YVLTGVNFEQSQTTMLPGSEDKLAEVLQFMKDHPNVKIEIIGHTEK---AGDERQNVRLS 750 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 RA + L G++ RI+ G +D + NRRI++ V + Sbjct: 751 EFRARTVANWLFNKGIASSRITTA-GKGSAEPIDPND--AAVNRRIEVKVVE 799 >gi|312882154|ref|ZP_07741903.1| hypothetical protein VIBC2010_06184 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370200|gb|EFP97703.1| hypothetical protein VIBC2010_06184 [Vibrio caribbenthicus ATCC BAA-2122] Length = 215 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 6/108 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F S L ++ E L + I+I GHTD + N L L RA +A Sbjct: 106 FGFDQSNLTAMGRDALSQLAESLKNEDSAIAIEGHTDN---KGSEGYNQALGLRRALAAS 162 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 L+ GV +RI + + + + + NRR +I +R Sbjct: 163 GALLTEGVDANRIV-VRSYGENLPIATNSTEEGRAQNRRSEIKTSERN 209 >gi|163732848|ref|ZP_02140293.1| OmpA domain protein [Roseobacter litoralis Och 149] gi|161394208|gb|EDQ18532.1| OmpA domain protein [Roseobacter litoralis Och 149] Length = 176 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ + + +I +VL + + ++GHTD+ N LS RA S Sbjct: 48 FEPGSATIDAAALTTMDQIADVLRVCGDLKLEVQGHTDSQ---GREEMNRSLSQARAQSV 104 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L V G+ +D NRRI+ + + Sbjct: 105 LNELRARKVLTSNFIA-KGYGEANPIADNDTEEGREANRRIEFKLIRPE 152 >gi|269302570|gb|ACZ32670.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae LPCoLN] Length = 192 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPL-PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S E + +L + + + + + I GHTD A N L RA + Sbjct: 88 FATDSYTIKGEENLAILTNLVHYMKKNPKATLYIEGHTDER---GAASYNLALGARRANA 144 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 + L K G+S DR+ IS + + ++ NRR + + R Sbjct: 145 IKEHLRKQGISADRLPTIS-YGKEHPLNSGHNELAWQQNRRTEFKIHAR 192 >gi|171463937|ref|YP_001798050.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193475|gb|ACB44436.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 188 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 37/106 (34%), Gaps = 7/106 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 ++D + S PE L KI L + I G+TD+ N L RA S Sbjct: 81 LYDFNKSDLKPEGKATLDKIAADLKKIKLEVIITVGNTDSV---GTDAYNMALGQRRAQS 137 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 L+ V RI ++ + NRR DI V Sbjct: 138 VKTYLVSKDVDGSRIYT-ESKGKSNPVASNATAEGRAKNRRTDIEV 182 >gi|86141821|ref|ZP_01060345.1| OmpA family protein [Leeuwenhoekiella blandensis MED217] gi|85831384|gb|EAQ49840.1| OmpA family protein [Leeuwenhoekiella blandensis MED217] Length = 653 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 54/162 (33%), Gaps = 18/162 (11%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSSIP 244 R + S +L + V I+ D + FD Sbjct: 493 RADEPEYYSSESLITTPKGGGDQVVDLYLEPRITKINEGDDLADLLKLKPIYFDFDRFNI 552 Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 P+ L K+ V+ + V+ IR HTD+ N LS RA S ++ G Sbjct: 553 RPDAAEELTKVLAVMESNPSLVVEIRSHTDSR---GNDAYNLSLSDKRAKSTADWIVNRG 609 Query: 304 VSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 + RI GF +L ++ + NRR + +V Sbjct: 610 IEPSRI-SGEGFGETQLINDCGNGADCTEEQHQLNRRSEFIV 650 >gi|311697262|gb|ADQ00134.1| outer membrane protein OprF [marine bacterium HP15] Length = 374 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ E + +I +L ++ VI I GH DA + N RLS RA S Sbjct: 269 FPLDSASIPAEFDSEIDRIAALILENTGTVIEIAGHADA---SGDSVYNQRLSQRRAESV 325 Query: 296 YQVLMKSGVS-EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ + DRI + G+ + ++ NRR++ V+ Sbjct: 326 ASALISRNATIADRIKAV-GYGETQPIATNETAQGREMNRRVEARVQ 371 >gi|262373123|ref|ZP_06066402.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205] gi|262313148|gb|EEY94233.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205] Length = 188 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS E LQ + L + +++ GHTD N L RA + Sbjct: 80 FDYDSSDLSNEDYQTLQAHAQFLVANANSRVALTGHTDER---GTREYNMALGERRAKAV 136 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 L+ +GV+ ++ +S + A ++ NRR++I Sbjct: 137 ESFLITNGVNPQQLEAVS-YGKEAPVNAGHNEAAWKENRRVEI 178 >gi|226953967|ref|ZP_03824431.1| OmpA family outer membrane protein [Acinetobacter sp. ATCC 27244] gi|226835321|gb|EEH67704.1| OmpA family outer membrane protein [Acinetobacter sp. ATCC 27244] Length = 159 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 +FD + S PE + ++ + L + + I GHTD N +LS + Sbjct: 52 PERLLFDFNKSDIKPEHATEIARLAKQLNKYDLQKLKIVGHTDDV---GNPEYNQKLSEE 108 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA S + + G ++ + + G + + + ++NRR+ +++ Sbjct: 109 RAQSVSMIFVNEGFKQNNL-TVIGRGSSQPYLPNTSEENRASNRRVAVII 157 >gi|157165686|ref|YP_001466588.1| OmpA family protein [Campylobacter concisus 13826] Length = 219 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 74/178 (41%), Gaps = 11/178 (6%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + K +K Q+ ++ L+ + + E + G + Sbjct: 24 ARPDSQVEKETDPESRRTPKPKAQKGAQNEVTSTVKKINELLTASGAPEITMEESEDGFI 83 Query: 226 ISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTE--VISIRGHTDASPFR--NI 280 + + +FDK S+ + + L++IG ++A I G+TD + +I Sbjct: 84 VRLPAAM---LFDKDSAEISGEDAKLFLKRIGMIIAKMPNEVKTDIIGYTDNTNPSKDSI 140 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++NW+LS RA S + L+ GV ++R+ SG A ++ + N R++I Sbjct: 141 YKNNWQLSTARALSVLEELVSDGVPQERLIT-SGRASFDPIASNSTDEGRAKNNRVEI 197 >gi|317127982|ref|YP_004094264.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522] gi|315472930|gb|ADU29533.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522] Length = 484 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 8/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSL 289 + +FD S E V++++ L + I GHTD N+ LS Sbjct: 372 PDDILFDFDQSSLKEEAKEVIKEVLPALDSLKDGTIIEIRGHTDNE---GDPDYNYILSE 428 Query: 290 DRAYSAYQVLMKSGVSEDRI-SKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 +RA S Y + SG S D I ++ F +++ NRR++++++ R Sbjct: 429 ERAESVYNFVRNSGESLDHIEFRVKAFGETAPIASNEDEEGRERNRRVELVIDPR 483 >gi|124007750|ref|ZP_01692453.1| OmpA family protein [Microscilla marina ATCC 23134] gi|123986872|gb|EAY26644.1| OmpA family protein [Microscilla marina ATCC 23134] Length = 274 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + F S ++ +L + + + E I + GHT N RLS Sbjct: 162 EDGAFRFKLGSDELDEKSKALLDSVAQKMMEFPEAEIEVSGHTCNI---GTKAGNLRLSK 218 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRI 334 RA + + LM+ G+ RI G+A +R + ++P NRR+ Sbjct: 219 KRAEAVRKYLMEYDGIDPKRIKTA-GYADNRPLVPNINEPNRKKNRRV 265 >gi|194366890|ref|YP_002029500.1| peptidoglycan-associated lipoprotein [Stenotrophomonas maltophilia R551-3] gi|194349694|gb|ACF52817.1| peptidoglycan-associated lipoprotein [Stenotrophomonas maltophilia R551-3] Length = 172 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD PE ++ + L I+++GHTD N L Sbjct: 63 RQRVVYFDLDKEDVKPEFQAIMACHAKYLRDRPSSRITLQGHTDER---GSRAYNQALGE 119 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337 R L +G S +++ +S + R +++ S NRR++I+ Sbjct: 120 RRGNGVNSALQANGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 168 >gi|262168510|ref|ZP_06036206.1| protein F-related protein [Vibrio cholerae RC27] gi|262023039|gb|EEY41744.1| protein F-related protein [Vibrio cholerae RC27] Length = 204 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246 ++ + + +++ + +L + ++ +I NT F+ S+ Sbjct: 49 QKNTSVMSNAMTQQRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 108 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L + LA + + + GHTD + + N +L+ RA + L++S V+ Sbjct: 109 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 165 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++ I GF + + + NRR++I Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197 >gi|190575561|ref|YP_001973406.1| putative peptidoglycan-associated lipoprotein [Stenotrophomonas maltophilia K279a] gi|254523725|ref|ZP_05135780.1| PAL family outer membrane lipoprotein [Stenotrophomonas sp. SKA14] gi|190013483|emb|CAQ47118.1| putative peptidoglycan-associated lipoprotein [Stenotrophomonas maltophilia K279a] gi|219721316|gb|EED39841.1| PAL family outer membrane lipoprotein [Stenotrophomonas sp. SKA14] Length = 172 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD PE ++ + L I+++GHTD N L Sbjct: 63 RQRVVYFDLDKEDVKPEFQAIMACHAKYLRDRPSSRITLQGHTDER---GSRAYNQALGE 119 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337 R L +G S +++ +S + R +++ S NRR++I+ Sbjct: 120 RRGNGVNSALQANGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 168 >gi|150005847|ref|YP_001300591.1| OmpA family outer membrane protein [Bacteroides vulgatus ATCC 8482] gi|149934271|gb|ABR40969.1| outer membrane protein, OmpA family [Bacteroides vulgatus ATCC 8482] Length = 239 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 10/155 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + +F+ ++ + L K Sbjct: 74 KKMDKAAEEAAQIQGAQVEQVTDNNGLQAVKVTFDSG-ILFNTGNAALSAQAKSALSKFA 132 Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + +SI G+TD +RN + N LS +RA S L+ GVS +I Sbjct: 133 NNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSIQKNLNLSQERAQSVASYLLGCGVSNSQI 192 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G +D NRR+++ + Q Sbjct: 193 KSVEGLGQADPIGNNDTAEGRQQNRRVEVYMYASQ 227 >gi|326794907|ref|YP_004312727.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] gi|326545671|gb|ADZ90891.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] Length = 209 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD I P ++K+ + + + + + GHTD N LS RA Sbjct: 79 NILFDSGKDIVKPRYYSEVKKLADFMRKNPQSSIVIEGHTDDV---GSEELNLGLSQRRA 135 Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + VL S V + R+ + G+ R +D NRR+ + RQ Sbjct: 136 SAIASVLTDSFMVRKSRVKGV-GYGETRPIATNDTATGREQNRRVVAEIFARQ 187 >gi|284034989|ref|YP_003384919.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283814282|gb|ADB36120.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 432 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 83/255 (32%), Gaps = 13/255 (5%) Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 P +++ + + D+ T K + +S K +T Sbjct: 187 PKKQTPLPQPSGESGGEMETPRTDVPKKETL--KPAPAPVPTLVSVSGIVSDAKSKRPVT 244 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 + K + L+K ++ R A + Sbjct: 245 ATIDYQLSSSKQAIDSVQSFASTGAYRMSLNKGQVYTYIASARGYQSASGVLDLSKVAGG 304 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267 + + + G +++ F+ S S L + L K+ ++ + + I Sbjct: 305 QKLTRDIALTPLAVGDKVTL----KNIYFEMSKSNLLSASFAELNKLVSMMQDNPNMSIR 360 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SD 325 + GHTD N +LS DR + + L++ G+ DRI I G+ R + +D Sbjct: 361 LEGHTD---IIGDHDKNLQLSRDRVIACQRYLVQQGIDIDRIQTI-GYGDTRPILTKGTD 416 Query: 326 PMNSANRRIDILVED 340 NRR++ ++ Sbjct: 417 EERKVNRRVEFVILA 431 >gi|167623118|ref|YP_001673412.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167353140|gb|ABZ75753.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4] Length = 199 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ + + L L+ I L + + + GHTD+ N +LS +RA Sbjct: 96 FEFARADVLLSQAQTLEVIARWLKSTGGDLLLVGHTDSV---GSPAYNLQLSFERAEQVK 152 Query: 297 QVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 VL++ G+ R ++ G + NRR++ LV Sbjct: 153 NVLVEQFGLLASRF-QVVGVGSAEPIADNRTRQGREQNRRVEFLV 196 >gi|319763880|ref|YP_004127817.1| ompa/motb domain protein [Alicycliphilus denitrificans BC] gi|330823856|ref|YP_004387159.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans K601] gi|317118441|gb|ADV00930.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC] gi|329309228|gb|AEB83643.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601] Length = 171 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD +S E +L ++G L + + GH D N RLSL R Sbjct: 64 GKLLFDFNSDAMTGERREMLVRMGHALVGVGVRALRVEGHADDQ---GSPDYNERLSLRR 120 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338 A + QVL ++G+ +RI I G+ R + S+ NRR+ ++V Sbjct: 121 AQAVAQVLAEAGIPRERID-IRGYGASRPLVIGTSEAARQENRRVALIV 168 >gi|167035658|ref|YP_001670889.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1] gi|166862146|gb|ABZ00554.1| OmpA/MotB domain protein [Pseudomonas putida GB-1] Length = 163 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287 D +F ++ ++++IG+ L + + + GH DA A N +L Sbjct: 52 YDLSGKVLFGSDLDSLNGQSQSIVERIGKALLSVGIQGVRVDGHADA---SGKAAYNQQL 108 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 S RA S + L+ G+ I G + + NRR+ I+V Sbjct: 109 SERRAQSVTKALVGVGMQPQNIQS-RGLGSTQPVADNRTSAGRTENRRVSIVV 160 >gi|186477828|ref|YP_001859298.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815] gi|184194287|gb|ACC72252.1| OmpA/MotB domain protein [Burkholderia phymatum STM815] Length = 242 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 7/113 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + F S+ P L + ++I G+TD++ A N RLS Sbjct: 134 QGDATFAVGSATLTPFATAKLDDFVAANQGVDVDRLTIAGYTDST---GSAELNNRLSAA 190 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 RA S L +G+ + G+ + + NRR++I V+ + Sbjct: 191 RARSVQGYLATAGLRASA-WDVQGYGSASPVAPNKTAIGRAKNRRVEIQVDGK 242 >gi|225011622|ref|ZP_03702060.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A] gi|225004125|gb|EEG42097.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A] Length = 468 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 82/269 (30%), Gaps = 22/269 (8%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P K+ G+ + P+ + ID + V+ E+ Sbjct: 214 PDKKDECPEVPGLKEYNGCPDTDGDSVIDKNDICPEVAGKVEFNGCPDTDGDGVSDPEDA 273 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ S + + C D + D S E P + + Sbjct: 274 CIDIAGSIEMKGCP---DTDGDGISDATDSCINEIGPLDNNGCPWPDADNDGVADK---- 326 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 DL K ++S + V+ G I+ + + + Sbjct: 327 --DDLCKDEVGSISNNGCPKLSNEVMKTINEFGAKINFAASSDKILG-------KKMFDI 377 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + + ++ + + I G+ A N LS+ RA + L K G++ +R+ Sbjct: 378 LYKIKDILIENPVGNLLIEGYASAD---GSEEYNIELSVKRAEAVRDFLNKIGINIERL- 433 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDIL 337 ++ G + ++ + NRR+ + Sbjct: 434 EVRGLGVNSPVGNNESPEGRAENRRVQFI 462 >gi|319407719|emb|CBI81367.1| Outer membrane lipoprotein omp16 homolog [Bartonella sp. 1-1C] Length = 168 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F SS + +L + E L I+I GH D N L R Sbjct: 58 DRVFFSLDSSSIESDAEYILARQAEWLLRYPHYSITIEGHADER---GTREYNLALGQRR 114 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340 A + L+ GVS R++ IS + R + + NRR ++V + Sbjct: 115 AVAVRDHLISLGVSSQRMNTIS-YGKERPVAVCDNISCWNQNRRAVLVVNN 164 >gi|319793387|ref|YP_004155027.1| peptidoglycaN-associated lipoprotein [Variovorax paradoxus EPS] gi|315595850|gb|ADU36916.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus EPS] Length = 172 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 7/107 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 FD S PE ++ L + + I GHTD N L R Sbjct: 66 RIVYFDYDSYTVKPEFQSIVDGHARFLKSAPQRRISIEGHTDER---GGREYNLALGQKR 122 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 A + + L GV++ +I +S F + + + + NRR +I Sbjct: 123 AEAVRRALTLLGVNDSQIEAVS-FGKEKPAVQGGGEEAWAQNRRAEI 168 >gi|282853319|ref|ZP_06262656.1| OmpA family protein [Propionibacterium acnes J139] gi|282582772|gb|EFB88152.1| OmpA family protein [Propionibacterium acnes J139] gi|314922410|gb|EFS86241.1| OmpA family protein [Propionibacterium acnes HL001PA1] gi|314965447|gb|EFT09546.1| OmpA family protein [Propionibacterium acnes HL082PA2] gi|314982607|gb|EFT26699.1| OmpA family protein [Propionibacterium acnes HL110PA3] gi|315091130|gb|EFT63106.1| OmpA family protein [Propionibacterium acnes HL110PA4] gi|315094263|gb|EFT66239.1| OmpA family protein [Propionibacterium acnes HL060PA1] gi|327329241|gb|EGE71001.1| putative outer membrane protein A [Propionibacterium acnes HL103PA1] Length = 363 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 14/118 (11%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287 D + +FD S + P ++ + + L + I + G+TD A N L Sbjct: 252 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDN---SGSASHNLDL 308 Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 S RA S +VL + G++ +G ++D NRR+ I V++ Sbjct: 309 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVASNDSEAGRCLNRRVTITVKE 362 >gi|156934557|ref|YP_001438473.1| outer membrane protein A [Cronobacter sakazakii ATCC BAA-894] gi|156532811|gb|ABU77637.1| hypothetical protein ESA_02391 [Cronobacter sakazakii ATCC BAA-894] Length = 358 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 230 KSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ ++IS G + P + +RR++I Sbjct: 287 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKPRAALIECLGPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|255263976|ref|ZP_05343318.1| OmpA family protein [Thalassiobium sp. R2A62] gi|255106311|gb|EET48985.1| OmpA family protein [Thalassiobium sp. R2A62] Length = 189 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +F S L + + GHTD+ N RLS +RA S Sbjct: 91 LFQTDSYHINNAGKQALMNFFR--SSGASAYIVTGHTDSR---ASDAYNMRLSQNRANSV 145 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 +V G RI + G+ + + + + NRR++I+ Sbjct: 146 ARVGQSVG---ARIVDVRGYGERQPRADNHSHQGMAQNRRVEII 186 >gi|42527651|ref|NP_972749.1| OmpA family protein [Treponema denticola ATCC 35405] gi|41818479|gb|AAS12668.1| OmpA family protein [Treponema denticola ATCC 35405] Length = 449 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 52/143 (36%), Gaps = 12/143 (8%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + L+ + KG+ + + I + D R F LPE + + I E L Sbjct: 314 DIELLLEKHKEKGIELSNPKNIVKIIMYDIR----FVADMPDVLPEEMGKIDVIAEALLK 369 Query: 262 --STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 I GHT N D LS+ RA + K G+ RI G+ R Sbjct: 370 LGPYTKFLIEGHTADL---NRPEDEKILSVQRAERIADEISKRGIDRSRIMTA-GYGSTR 425 Query: 320 LKIA--SDPMNSANRRIDILVED 340 ++ + NRR++I V Sbjct: 426 PVAPSNNETNMAKNRRVEITVIR 448 >gi|228018085|gb|ACP52721.1| fibronectin-binding protein [Campylobacter coli] Length = 224 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD P +++I ++L + +I GHTD N +LS RA S Sbjct: 136 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 192 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 + L K GV + RI + G+ + + ++D Sbjct: 193 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 224 >gi|294139825|ref|YP_003555803.1| OmpA family protein [Shewanella violacea DSS12] gi|293326294|dbj|BAJ01025.1| OmpA family protein [Shewanella violacea DSS12] Length = 210 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 7/115 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 I T F+ + + VL +I + L + + + GHTD+ N RL Sbjct: 97 IEADDLTLNFEFAKAEVSYSQWQVLAQIKQFLQLNDVDLCLIGHTDSI---GNLEANQRL 153 Query: 288 SLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 S RA S ++L++ G R + G +D NRR++ LVE Sbjct: 154 SEARAKSVMRILVEDYGFEPGRFI-VRGMGTRSPIGTNDTPGGRTLNRRVNFLVE 207 >gi|260597356|ref|YP_003209927.1| outer membrane protein A [Cronobacter turicensis z3032] gi|260216533|emb|CBA29736.1| Outer membrane protein A [Cronobacter turicensis z3032] Length = 355 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 227 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDSYNQGLS 283 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ ++IS G + P + +RR++I Sbjct: 284 EKRAQSVVDYLISKGIPSNKISA-RGMGESNPVTGNTCDNVKPRAALIECLGPDRRVEIE 342 Query: 338 VED 340 V+ Sbjct: 343 VKG 345 >gi|239818113|ref|YP_002947023.1| OmpA/MotB domain protein [Variovorax paradoxus S110] gi|239804690|gb|ACS21757.1| OmpA/MotB domain protein [Variovorax paradoxus S110] Length = 187 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 7/113 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 N FD + VL K+ E L + + + GHTD + N RLS+ Sbjct: 78 PNELSFDVGRANVKRNLAQVLDKVAEGLRSAAAASVRVVGHTDNT---GSEEGNERLSVS 134 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA S L+ GVS I+ G + + NRR++I V ++ Sbjct: 135 RADSVRNHLVSRGVSTTAITT-DGRGSREPIADNATPAGRAQNRRVEIFVAEK 186 >gi|239995434|ref|ZP_04715958.1| sodium-type flagellar protein MotY [Alteromonas macleodii ATCC 27126] Length = 118 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 8/107 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAY 293 + +S+ + L IGE L E+ + G+TD+ +N +LS+ RA Sbjct: 13 SYQNNSTELTKYSQKRLTMIGEYLKEDGELELVLLDGYTDSY---GGRYNNEQLSIRRAN 69 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 L GV EDRI +++G R +D + NRR+ + + Sbjct: 70 EVKSYLTTLGVPEDRI-QLTGHGEKRHIAPNDTRESRAQNRRVVVRL 115 >gi|332297244|ref|YP_004439166.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168] gi|332180347|gb|AEE16035.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168] Length = 436 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 67/195 (34%), Gaps = 14/195 (7%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 D+E+G + D + K + + R D + + L + Sbjct: 253 DNERGAIDHYNEDFRIIVESAYGNTFEFSGKAQAEVQEFASRSADRLADVRERIDQLGIE 312 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISI 268 N G+ IS+ F S++ L + L+KI E+L+ + I Sbjct: 313 NAQ----VRADEKGLTISL----ENIQFKADSAVLLESEKMKLRKIAEILSLFPENDLLI 364 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 GHT A LS RA + + LM+ G+ + G + Sbjct: 365 TGHT---ALAGTAASRTALSEQRAKAVAEYLMQLGIRDSYHIFTQGLGGEHPIAPNTTEA 421 Query: 329 --SANRRIDILVEDR 341 + NRR++I V D+ Sbjct: 422 NKARNRRVEITVMDK 436 >gi|313887354|ref|ZP_07821045.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I] gi|332299263|ref|YP_004441184.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] gi|312923273|gb|EFR34091.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I] gi|332176326|gb|AEE12016.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] Length = 225 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 8/146 (5%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + G ET G I ++ +F+ SSS + L+K + L Sbjct: 73 MEKQKKELEQQLPAGTQVETVNEGQAIKVVFDSGL-LFNTSSSTLSSSSRNDLRKFADNL 131 Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + + I GHTD+ R N LSL+RA S L GVS R+ G H Sbjct: 132 NKNDDTVLEIIGHTDS---SGNDRINDPLSLNRAKSVRDFLEGQGVSSVRMK-YEGRGSH 187 Query: 319 RLKIASDPMNS--ANRRIDILVEDRQ 342 + NRR+++ + Q Sbjct: 188 EPVDTNATAEGKRKNRRVEVFILPSQ 213 >gi|228018097|gb|ACP52727.1| fibronectin-binding protein [Campylobacter coli] Length = 224 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD P +++I ++L + +I GHTD N +LS RA S Sbjct: 136 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 192 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 + L K GV + RI + G+ + + ++D Sbjct: 193 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 224 >gi|224417757|ref|ZP_03655763.1| motility protein MotB [Helicobacter canadensis MIT 98-5491] gi|253827100|ref|ZP_04869985.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491] gi|313141298|ref|ZP_07803491.1| motb protein [Helicobacter canadensis MIT 98-5491] gi|253510506|gb|EES89165.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491] gi|313130329|gb|EFR47946.1| motb protein [Helicobacter canadensis MIT 98-5491] Length = 256 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 80/204 (39%), Gaps = 13/204 (6%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + + E L + + ++ K + P+ I A + + ++ + + Sbjct: 40 ATFTTEKIDEAIGSLEGTFAVLENGVKTQINPPAPILATPIEAQQEMEDATNIFASLITE 99 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE----TIVVLQKIGEV 258 + + V FE G++I I + +F+ S+ + L + Sbjct: 100 YNEINKLANGPAVEFEEAEEGVIIRIPESL---LFESGSATLTNSSGLAFLKRLTLEFDK 156 Query: 259 LAHSTEVISIRGHTDASPFRNI--ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + + +I GHTD P R DN LS+ R + ++++ G+S++R+ G Sbjct: 157 LPETALIKAI-GHTDNVPMRENPIFADNLELSIARGVNVAELIITEGISKERVL-GGGEG 214 Query: 317 HHRLKIASD--PMNSANRRIDILV 338 ++ + + NRR+D+ + Sbjct: 215 EFSPIASNKIPELRAKNRRVDLYI 238 >gi|111115105|ref|YP_709723.1| flagellar motor protein MotB [Borrelia afzelii PKo] gi|216263787|ref|ZP_03435781.1| flagellar motor apparatus [Borrelia afzelii ACA-1] gi|110890379|gb|ABH01547.1| flagellar motor rotation protein B [Borrelia afzelii PKo] gi|215979831|gb|EEC20653.1| flagellar motor apparatus [Borrelia afzelii ACA-1] Length = 260 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 16/162 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL----PET 248 Q + ++ + K ++ GI+IS+ FD +S+ ++ Sbjct: 91 QASQTAKNKSMIEFIEKIQSKNIIVRQEERGIVISLAAD---AFFDSASADVKLEDNRDS 147 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYS----AYQVLMKS 302 I + VL+ I GHTD + ++NW LS+ R+ + L +S Sbjct: 148 IQKIASFIGVLSSRGYNFKIEGHTDNIDTDVNGPWKNNWELSVARSVNMLEHILNYLDQS 207 Query: 303 GVSE-DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 V + ++SGF R D NRRIDIL+ Sbjct: 208 NVKSIENKFEVSGFGGSRPIATDDTPEGRAYNRRIDILITTD 249 Score = 51.9 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 17/39 (43%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT 57 + + + Y D +T+L+ FF+ M+ +N Sbjct: 4 RTKKPLKCDEGAPDYMLTYGDMVTLLLVFFVTMFSLNDI 42 >gi|85714945|ref|ZP_01045930.1| OmpA/MotB [Nitrobacter sp. Nb-311A] gi|85698142|gb|EAQ36014.1| OmpA/MotB [Nitrobacter sp. Nb-311A] Length = 209 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S+ + L +G+ L VI + GHTDA + R N LS RA Sbjct: 99 FDFDSAELSAKAEPQLNNLGQALTSPELAGSVIMLGGHTDA---KGSDRYNQSLSERRAE 155 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + + L++ +S + + + G+ RLK +DP + NRR++I+ Sbjct: 156 TIKRFLIERYKISPENLVAV-GYGESRLKNKADPDAAENRRVEIV 199 >gi|295133926|ref|YP_003584602.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda SM-A87] gi|294981941|gb|ADF52406.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda SM-A87] Length = 281 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 93/232 (40%), Gaps = 12/232 (5%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 ST QK + ++ E Y + + + + + D+ NK ++ Sbjct: 37 TKSTLQKTRVEKEEIEEKYAAIEARVADYNAKINSLRSSNDEKLEMNDVTAMSNKTKDRM 96 Query: 175 LPPLSKEKILAMKRKKRLQD-LAKKISSTLSGLVADNI-VKGVLFETTRTGILISIIDQR 232 ++K ++ + L+D + IS L + + V +T ++I++ D+ Sbjct: 97 RKTIAKMDASELEGVETLEDSINAAISYNLKNEITEGKDGDDVDITVDKTVVMINVSDKL 156 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR--NIARDNWRLSL 289 +F S + +L+K+ EV+ + + + GHTD + DNW LS+ Sbjct: 157 ---LFRSGSYRLSNDAQPLLKKLAEVINSEPSMEVMVEGHTDNRTMVEDSWLEDNWDLSV 213 Query: 290 DRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 RA + + L K V ++ G + + + + + + NRR I+V Sbjct: 214 RRATAVVRQLQDKYDVDGAKLIAA-GRSSYSPLVENTSKDNMAKNRRTRIVV 264 >gi|89891804|ref|ZP_01203306.1| putative flagellar motor protein MotB [Flavobacteria bacterium BBFL7] gi|89515959|gb|EAS18624.1| putative flagellar motor protein MotB [Flavobacteria bacterium BBFL7] Length = 287 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 97/246 (39%), Gaps = 18/246 (7%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 + N D + + + + LEN + + + + K + + + G + Sbjct: 27 ELETNYNDTRSELQKTRVEKEDLENKMEQIEMRVERYNSKIASLKSDQDGMMVSTDGGSL 86 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQD-----LAKKISSTLSGLVADNIVKGVLFET 219 + L + L+D +A I+ + +D + Sbjct: 87 VLSENNKKAMRKTLQDVPAAKLAGATTLKDSLNIAIAHNIAKKMGSTSSDK---DLNVSI 143 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278 T ++I+I D +F SS + +L KI EV+A I + GHTD+ + Sbjct: 144 EETVVMINIDDDL---LFKDSSYRVSNDADEILAKIAEVVASEPSLEILVEGHTDSRTVK 200 Query: 279 NIAR--DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 + DNW LS +R+ + + L + GV+ +++ ++G A + A+D + + NRR Sbjct: 201 QGSYIKDNWDLSTERSAAIVRRLEEKFGVAPEQLI-VAGRASYDPIAANDSKDNMARNRR 259 Query: 334 IDILVE 339 I++ Sbjct: 260 TQIVIM 265 >gi|229513150|ref|ZP_04402615.1| protein F-related protein [Vibrio cholerae TMA 21] gi|229349560|gb|EEO14515.1| protein F-related protein [Vibrio cholerae TMA 21] Length = 204 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246 ++ + + +++ + +L + ++ +I NT F+ S+ Sbjct: 49 QKNTSVMSNAMTQSRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 108 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L + LA + + + GHTD + + N +L+ RA + L++S V+ Sbjct: 109 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 165 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++ I GF + + + NRR++I Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197 >gi|170724980|ref|YP_001759006.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908] gi|169810327|gb|ACA84911.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908] Length = 229 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S PE+ ++L K+ + L + EVI + GHTD N+ L L RA Sbjct: 123 RVYFDFDSKSLTPESRLILDKVAKRLVQAPEVIKLVGHTDN---SGSEEYNYSLGLLRAD 179 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDIL 337 +A L K GV + ++ R +++ + NRR+++L Sbjct: 180 NAQTYLNKQGVRDTQLKS-ESQGETRPIASNENLDGRALNRRVELL 224 >gi|289641193|ref|ZP_06473360.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata] gi|289508955|gb|EFD29887.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata] Length = 226 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 54/176 (30%), Gaps = 21/176 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN--- 233 P ++ A + D A I ++ + ++ + E + + D Sbjct: 53 PTARAATDAPTTAPTVTDQA--IIESIREINPAAAIRPIDVERSVVTLRTERRDGSGVVV 110 Query: 234 ----TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 +F S+ L I L T I++ G+TD++ N LS Sbjct: 111 TISSDVLFAFDSANLTKAAREQLDGIAAQLGRVTGTITVNGYTDST---GTPAYNVILSQ 167 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--------SDPMNSANRRIDIL 337 RA + +L + + +G + NRR+ I+ Sbjct: 168 QRANAVANLL-RPKAPPGVLVSATGHGAANPVAPNTNSDGSDNSAGRGQNRRVSII 222 >gi|13472165|ref|NP_103732.1| hypothetical protein mll2368 [Mesorhizobium loti MAFF303099] gi|14022910|dbj|BAB49518.1| mll2368 [Mesorhizobium loti MAFF303099] Length = 167 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 8/106 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ L + + L + + GHTDA+ R N LS RA Sbjct: 65 FALDSAQLDQTARAELDEFAKALKDNRLSTFSFVVEGHTDAT---GPDRYNQDLSQRRAQ 121 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 S L +GV R+ I G ++A+ P + NRR+++ + Sbjct: 122 SVAAFLEANGVESVRLEAI-GLGKSHPRVAN-PYDPVNRRVEMRIR 165 >gi|228018087|gb|ACP52722.1| fibronectin-binding protein [Campylobacter coli] Length = 224 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD P +++I ++L + +I GHTD N +LS RA S Sbjct: 136 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 192 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 + L K GV + RI + G+ + + ++D Sbjct: 193 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 224 >gi|228018083|gb|ACP52720.1| fibronectin-binding protein [Campylobacter coli] gi|228018091|gb|ACP52724.1| fibronectin-binding protein [Campylobacter coli] gi|228018093|gb|ACP52725.1| fibronectin-binding protein [Campylobacter coli] gi|228018101|gb|ACP52729.1| fibronectin-binding protein [Campylobacter coli] gi|228018103|gb|ACP52730.1| fibronectin-binding protein [Campylobacter coli] gi|228018105|gb|ACP52731.1| fibronectin-binding protein [Campylobacter coli] gi|228018107|gb|ACP52732.1| fibronectin-binding protein [Campylobacter coli] gi|228018115|gb|ACP52736.1| fibronectin-binding protein [Campylobacter coli] gi|228018117|gb|ACP52737.1| fibronectin-binding protein [Campylobacter coli] gi|228018125|gb|ACP52741.1| fibronectin-binding protein [Campylobacter coli] gi|228018127|gb|ACP52742.1| fibronectin-binding protein [Campylobacter coli] gi|228018129|gb|ACP52743.1| fibronectin-binding protein [Campylobacter coli] gi|228018131|gb|ACP52744.1| fibronectin-binding protein [Campylobacter coli] gi|228018133|gb|ACP52745.1| fibronectin-binding protein [Campylobacter coli] gi|228018135|gb|ACP52746.1| fibronectin-binding protein [Campylobacter coli] Length = 224 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD P +++I ++L + +I GHTD N +LS RA S Sbjct: 136 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 192 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 + L K GV + RI + G+ + + ++D Sbjct: 193 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 224 >gi|309782736|ref|ZP_07677457.1| OmpA family protein [Ralstonia sp. 5_7_47FAA] gi|308918514|gb|EFP64190.1| OmpA family protein [Ralstonia sp. 5_7_47FAA] Length = 274 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 9/151 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + Q L +++ L V + + + ++ ++ F+ S+ P+ Sbjct: 126 EAQRQQLTSDMATALGQSYTIKNGLRVAAVSEQGLLDQTLANRIIE--FETGSATLTPKG 183 Query: 249 IVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 +L ++ VL I GHTD N LS RA + L+ G + Sbjct: 184 RAILDEMAAVLPRLNGRKIEIVGHTDN---SGSRALNLNLSQARAETVKNYLIAKGAEQG 240 Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++ + G + A++ S NRRI+ Sbjct: 241 TLTAM-GVGPDQPVAANNTDEGRSRNRRIEF 270 >gi|114778984|ref|ZP_01453771.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Mariprofundus ferrooxydans PV-1] gi|114550783|gb|EAU53353.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Mariprofundus ferrooxydans PV-1] Length = 466 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 87/275 (31%), Gaps = 12/275 (4%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 + A++G ++ S + + + + Sbjct: 184 LVSSNPAARGQLYNESRNSIESARTSQQIAGLGKQLKKKPANVEAWVNSRNSDMETIALA 243 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 N + + +E + + DL+ + +++ L E + Sbjct: 244 LKLNLDNTASPGERVKLITEAIGQMRSNYDLQLADARQQIDTLQGNLSELDDTRSSLGQA 303 Query: 193 Q---DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + ++ + ++ L V T +I + + F S+I E+ Sbjct: 304 RYKLQIKREAEAKIAQLAKLFDPSQVELFLTTDADVIIRMKSIH---FPSGSAIIPSESY 360 Query: 250 VVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L+ + + + + + GHTD+ N LS RA + + L + R Sbjct: 361 DLLELASKAIDLFGDRAVRVEGHTDSM---GNDEYNQNLSERRATTVKEYLDARFSNNKR 417 Query: 309 ISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 GF ++ ++ S NRRIDI++ Sbjct: 418 TITSIGFGENKPIANNEKAEGRSKNRRIDIVLLAP 452 >gi|325475131|gb|EGC78317.1| OmpA family protein [Treponema denticola F0402] Length = 391 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 52/143 (36%), Gaps = 12/143 (8%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + L+ + KG+ + + I + D R F LPE + + I E L Sbjct: 256 DIELLLEKHKEKGIELSNPKNIVKIIMYDIR----FVADMPDVLPEEMGKIDVIAEALLK 311 Query: 262 --STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 I GHT N D LS+ RA + K G+ RI G+ R Sbjct: 312 LGPYTKFLIEGHTADL---NRPEDEKILSVQRAERIADEISKRGIDRSRIMTA-GYGSTR 367 Query: 320 LKIA--SDPMNSANRRIDILVED 340 ++ + NRR++I V Sbjct: 368 PVAPSNNETNMAKNRRVEITVIR 390 >gi|326424248|ref|NP_762484.2| protein F-like protein [Vibrio vulnificus CMCP6] gi|319999634|gb|AAO07474.2| Protein F-related protein [Vibrio vulnificus CMCP6] Length = 198 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 20/184 (10%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 T+ E + + P + + A K + + L + Sbjct: 28 APKTNEELVYPEWGGEEVSPPPPQMMQAQKPQVQSDSLQSFLQRNAIQYQI--------- 78 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASP 276 I+I + + + F S+ P + + +G L ++V + GH D++ Sbjct: 79 -LPGDHIMIHLTETIH---FKTGSAEVSPVSARWIGLLGNYLNQRSDVDIVIDGHADSTG 134 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 N LS RA + L+ S V E R+ G+ + ++ +N NRR+ Sbjct: 135 TTG---FNNSLSERRAEEVKKQLLMSRVPESRVYT-RGYGEYLPACSNTSINGRKCNRRV 190 Query: 335 DILV 338 ++++ Sbjct: 191 ELML 194 >gi|320158835|ref|YP_004191213.1| protein F-related protein [Vibrio vulnificus MO6-24/O] gi|319934147|gb|ADV89010.1| protein F-related protein [Vibrio vulnificus MO6-24/O] Length = 200 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 20/184 (10%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 T+ E + + P + + A K + + L + Sbjct: 30 APKTNEELVYPEWGGEEVSPPPPQMMQAQKPQVQSDSLQSFLQRNAIQYQI--------- 80 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASP 276 I+I + + + F S+ P + + +G L ++V + GH D++ Sbjct: 81 -LPGDHIMIHLTETIH---FKTGSAEVSPVSARWIGLLGNYLNQRSDVDIVIDGHADSTG 136 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 N LS RA + L+ S V E R+ G+ + ++ +N NRR+ Sbjct: 137 TTG---FNNSLSERRAEEVKKQLLMSRVPESRVYT-RGYGEYLPACSNTSINGRKCNRRV 192 Query: 335 DILV 338 ++++ Sbjct: 193 ELML 196 >gi|254463240|ref|ZP_05076656.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2083] gi|206679829|gb|EDZ44316.1| OmpA family domain protein [Rhodobacteraceae bacterium HTCC2083] Length = 316 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 92/315 (29%), Gaps = 23/315 (7%) Query: 47 FFLVMWIINATDDDTKKAIEQYFNPF-----GKNLMTASKGIFDEQNPPERSSQNKIDLS 101 FF+++ ++ + + + G + FD + P R + + Sbjct: 6 FFVILGLLPSLASAVELTLPGSARQTAGQNLGVDSYALPIAKFDGTDIPSRIFEGFVTRQ 65 Query: 102 ----IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 +T + L + ++ Y + + + Sbjct: 66 VWRIEGGGVTPLQLLLPLRDELKENGYTLIFECAARACGGFDFRFGTDVIDAPDMYVALD 125 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD------NI 211 + L + A + +Q + ++ Sbjct: 126 DYRFVSAIKGEADAPKAALSLLISRSAASAYIQIIQISVDDAADISVFKGSEIIASTTGS 185 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRG 270 + V + + +S + MF SS + LQ + + L ++ + G Sbjct: 186 GQAVTTKGAAATLDVSGRVILSDLMFQTGSSNLGEGSFKSLQNLADYLRSNSTRKVALVG 245 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNS 329 HTDA N LS RA S + L++ GV D++S G ++ Sbjct: 246 HTDAE---GSLEGNIALSKRRASSVRKRLIEAYGVPTDQLSA-DGVGFLSPVASNLSAAG 301 Query: 330 A--NRRIDILVEDRQ 342 NRR++ ++ Q Sbjct: 302 RTANRRVEAVLISTQ 316 >gi|170697803|ref|ZP_02888889.1| type IV / VI secretion system protein, DotU family [Burkholderia ambifaria IOP40-10] gi|170137305|gb|EDT05547.1| type IV / VI secretion system protein, DotU family [Burkholderia ambifaria IOP40-10] Length = 404 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 12/154 (7%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L LA+ + L VA V+ + + L R +F + P V Sbjct: 258 LDALARNLEQRLRDEVAAGNVELIRAPGSDALTL------RFGGLFAPGDAAVAPWGASV 311 Query: 252 LQKIGEVLAHSTE--VISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + G +A T + + G+ D++ R+ N LS RA Q+L+ +GVS R Sbjct: 312 VASAGREIAVLTGSATVHVAGYADSTSARSTRQASNQALSEARARHVAQILVSAGVSAPR 371 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 I + G + + NRR+++ + D Sbjct: 372 I-SVEGNGEADSLADNGTAAGRARNRRVEVTITD 404 >gi|37676733|ref|NP_937129.1| putative protein F-related protein [Vibrio vulnificus YJ016] gi|37201276|dbj|BAC97099.1| putative protein F-related protein [Vibrio vulnificus YJ016] Length = 193 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 20/184 (10%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 T+ E + + P + + A K + + L + Sbjct: 23 APKTNEELVYPEWGGEEVSPPPPQMMQAQKPQVQSDSLQSFLQRNAIQYQI--------- 73 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASP 276 I+I + + + F S+ P + + +G L ++V + GH D++ Sbjct: 74 -LPGDHIMIHLTETIH---FKTGSAEVSPVSARWIGLLGNYLNQRSDVDIVIDGHADSTG 129 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 N LS RA + L+ S V E R+ G+ + ++ +N NRR+ Sbjct: 130 TTG---FNNSLSERRAEEVKKQLLMSRVPESRVYT-RGYGEYLPACSNTSINGRKCNRRV 185 Query: 335 DILV 338 ++++ Sbjct: 186 ELML 189 >gi|315082132|gb|EFT54108.1| OmpA family protein [Propionibacterium acnes HL078PA1] Length = 368 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287 D + +FD S + P ++ + + L + I + G+TD+ A N L Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313 Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 S RA S +VL + G++ +G ++D NRR+ I V++ Sbjct: 314 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 367 >gi|228018109|gb|ACP52733.1| fibronectin-binding protein [Campylobacter coli] gi|228018111|gb|ACP52734.1| fibronectin-binding protein [Campylobacter coli] gi|228018113|gb|ACP52735.1| fibronectin-binding protein [Campylobacter coli] Length = 223 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD P +++I ++L + +I GHTD N +LS RA S Sbjct: 135 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 191 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 + L K GV + RI + G+ + + ++D Sbjct: 192 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 223 >gi|254415575|ref|ZP_05029335.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420] gi|196177756|gb|EDX72760.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420] Length = 727 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 91/286 (31%), Gaps = 18/286 (6%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN---KIDLSIDEHITKNSVDLKIGSTNQ 120 I NP + N P+ S+ D + +++ + Sbjct: 438 QIGDGHNPPRTTKYQRQTTGNNGINAPQFVSEEFVQLGDQLEVLGQAEPGSTVELYRVRE 497 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + + S + +E + G+ + ++ E S Sbjct: 498 AAESVYGPLSEPIASATTDAEGEFRVTLTGLQPGETISAIATHPENGTSEPALNAVVTSS 557 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + + + + ++ T V + + + + F Sbjct: 558 DGTIPANPEPQPPVIPQCLTQTPPPSSPPEPTPPVQ-----QPLTLRVPRNVH---FALD 609 Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 + PE+ VL ++ VL I ++GHTD A N L+ RA + L Sbjct: 610 RADISPESAAVLDQVAAVLQEYPFLTIELQGHTDPR---ASAAYNQALARRRALAVRNYL 666 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 ++ GV R+ I F + + + +RR++I+ +D +G Sbjct: 667 LRQGVDPGRM-TIRSFGESQRRTTGSGVVDYARDRRVEIIFQDLRG 711 >gi|203284201|ref|YP_002221941.1| flagellar motor rotation protein B [Borrelia duttonii Ly] gi|201083644|gb|ACH93235.1| flagellar motor rotation protein B [Borrelia duttonii Ly] Length = 262 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 59/167 (35%), Gaps = 18/167 (10%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL--- 245 K Q + ++ V V+ G+++S++ FD +S+ Sbjct: 89 AKNKQASQASKNKSIIEFVEKIQSNKVIVRRHERGVVVSLLAD---AFFDSASAEVKLDD 145 Query: 246 -PETIVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + I + L + I GHTD I + NW LS RA + + ++ Sbjct: 146 NRDVIQKIASFIGFLDNQGYNFKIEGHTDNVDVNINGIWKSNWELSSARAVNMLEQILNY 205 Query: 303 GVSEDRISK------ISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 +I +SGFA R D NRRIDIL+ Sbjct: 206 -TDHSKIESIESKFEVSGFAGSRPVATDDTPEGRAYNRRIDILITSD 251 >gi|86748938|ref|YP_485434.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] gi|86571966|gb|ABD06523.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] Length = 165 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + P+ I L K + L +I GH D N L R Sbjct: 57 DRVFFESDQTDLSPQAIATLDKQAQWLQSYNRYSFTIEGHADER---GTREYNIALGARR 113 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A S L G+ R+ IS + R +D S NRR Sbjct: 114 AQSVRNYLASRGIDPSRMRTIS-YGKERPVAVCNDISCWSQNRR 156 >gi|254488269|ref|ZP_05101474.1| OmpA domain protein [Roseobacter sp. GAI101] gi|214045138|gb|EEB85776.1| OmpA domain protein [Roseobacter sp. GAI101] Length = 632 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 87/302 (28%), Gaps = 11/302 (3%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + + TD D + ++ + + +P + LS D + Sbjct: 307 ITLVAAAGTDQDLFDRVVGELENALPDVFALDARLTEAVDPNAGPPEFVATLSTDGKVQL 366 Query: 109 NS--VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 D ++ + Y + + + TR L K + Sbjct: 367 RGRLSDEELRELADSYAKASFGTDKVYTAARIVDDLPADWPTRVLSGLDALSKLANGSVI 426 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-L 225 + + + L + ++ + + + + T Sbjct: 427 VQPDNVSVKGNTGNPDAGSQIATLLAGKLGEGQQYDIAVVYQEKLDPVLGLPTPEECEAQ 486 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 I + + F+ S+ + + +I E+L ++ I+G+TD+ N Sbjct: 487 IGEVVKAGKINFEPGSATIDASALSTMDQIAEILKPCGDIALEIQGYTDSQ---GREEMN 543 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI-LVEDR 341 LS RA S L V GF ++D NRRI+ L+ Sbjct: 544 LALSQSRAQSVLNELRARRVLTASFVA-KGFGEEAPVESNDTEEGREANRRIEFRLIRPE 602 Query: 342 QG 343 +G Sbjct: 603 EG 604 >gi|187918154|ref|YP_001883717.1| flagellar motor protein MotB [Borrelia hermsii DAH] gi|119861002|gb|AAX16797.1| chemotaxis MotB protein [Borrelia hermsii DAH] Length = 262 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 18/167 (10%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL--- 245 +K Q + ++ V V+ G+++S++ FD +S+ Sbjct: 89 EKNKQASQVSKNKSIIEFVEKIQSNKVIVREHERGVVVSLLAD---AFFDSASAEVKLDD 145 Query: 246 -PETIVVLQKIGEVLAHSTEVISIRGHTD--ASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 ETI + L + + I GHTD I + NW LS RA + + ++ Sbjct: 146 NRETIQKIASFIGFLDNQSYNFKIEGHTDNVDVNINGIWKSNWELSSARAVNMLEQILNY 205 Query: 303 GVSEDRISK------ISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + +I +SGFA + D NRRIDIL+ Sbjct: 206 -TDQSKIQSIESKFEVSGFAGSKPVATDDTPEGRAYNRRIDILITSD 251 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT--DDDTKKAIEQYFN 70 + + + + Y D +T+L+ FF+ M+ +N ++ K + F Sbjct: 5 RVRKKRSKCEEGAPDYMLTYGDMVTLLLVFFVTMFSLNDIILKENVLKIMSASFT 59 >gi|121725841|ref|ZP_01679141.1| OmpA family protein [Vibrio cholerae V52] gi|147672308|ref|YP_001215442.1| OmpA family protein [Vibrio cholerae O395] gi|121631606|gb|EAX63974.1| OmpA family protein [Vibrio cholerae V52] gi|146314691|gb|ABQ19231.1| OmpA family protein [Vibrio cholerae O395] gi|227015278|gb|ACP11487.1| protein F-related protein [Vibrio cholerae O395] Length = 207 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246 ++ + + +++ + +L + ++ +I NT F+ S+ Sbjct: 52 QKNTSVMSNAMTQQRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 111 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L + LA + + + GHTD + + N +L+ RA + L++S V+ Sbjct: 112 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 168 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++ I GF + + + NRR++I Sbjct: 169 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 200 >gi|119474693|ref|ZP_01615046.1| hypothetical protein GP2143_12776 [marine gamma proteobacterium HTCC2143] gi|119450896|gb|EAW32129.1| hypothetical protein GP2143_12776 [marine gamma proteobacterium HTCC2143] Length = 209 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 20/168 (11%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS+ L +++++ + + L+ +A T I IS + + Sbjct: 42 ELSQTLELEIQKRQAEEQRRMALEQALAAPLATG-----RVTLTNGRIGIS-----GSVL 91 Query: 237 FDKSSSIPLPETIVVLQKIGEVLA----HSTEVISIRGHTDASPF---RNIARDNWRLSL 289 F +S E +LQ + L E++ + G TD P N DNW LS Sbjct: 92 FATNSDQLQVEGRELLQTLVAPLQVYLGERDEMLMVSGFTDDKPIQRGNNRFADNWELSS 151 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 +RA + + L++ G+ + + F + + + + NRR++ Sbjct: 152 ERALTVTRALIEEGMPSSMVFAAA-FGAQQPVVPNTDGDSRARNRRVE 198 >gi|84499777|ref|ZP_00998065.1| OmpA domain protein [Oceanicola batsensis HTCC2597] gi|84392921|gb|EAQ05132.1| OmpA domain protein [Oceanicola batsensis HTCC2597] Length = 641 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 84/297 (28%), Gaps = 11/297 (3%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF--DEQNPPERSSQNKIDLSIDEHI 106 + + + D T + ++ DE P + + + Sbjct: 307 VTLIAAESADRATFDRVVGELENTLPDVFALHAVFPETDEGAPRGPAEFSATLSPEGQVQ 366 Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 + V ++ + + + ++ + + G Sbjct: 367 LRGRVHDELSRQSADSYARSRFGSDDVYFAARLDDSVPEGWSLRVLAGLQALSELANGAV 426 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS-TLSGLVADNIVKGVLFETTRTGIL 225 E + ++ + L D T+ + + T I Sbjct: 427 TVTETAVTVRGVTGNADANADIARILSDRLGDGEDFTIEVTYDEKLDPEAALPTPEECIA 486 Query: 226 -ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARD 283 + I + F+ S+ ++ +L I EVL + I GHTD+ Sbjct: 487 DVKSIQESRKINFEPGSATVTGDSRAILDDIAEVLKFCGPVDLEIGGHTDSQ---GREIM 543 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 N +LS DRA + L + V +G+ + +D NRRI+ + Sbjct: 544 NEQLSQDRADTVLAELRQRRVKTAGFVA-TGYGETQPIADNDTEEGREENRRIEFSL 599 >gi|302035651|ref|YP_003795973.1| putative OmpA/MotB family outer membrane protein [Candidatus Nitrospira defluvii] gi|300603715|emb|CBK40046.1| putative Outer membrane protein, OmpA/MotB family [Candidatus Nitrospira defluvii] Length = 501 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 97/291 (33%), Gaps = 11/291 (3%) Query: 55 NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 ++ KA + K+ + + ++ + + + ++ + Sbjct: 188 ATATIESLKARISSLDQQLKDREQTYETVRSRLMERDKLVPQYNAMIAEIYQARHRIAAL 247 Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 N+K + LS+SQ+ N + + + + + + Sbjct: 248 EQRLNEKGRDLSPRQKGTQLSSSQRDGGPLNQRSGAAHQSLGDTTKSIPDGKSAAQGKDS 307 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + + R +A L L DN K + + +++ Sbjct: 308 TRSGVAFPGNPAQSEARNGSIAAVKEELLKVLPGDNRQKTISMRQDGNRLTVALDSNL-- 365 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI----ARDNWRLSL 289 +F + PE +L++IG VL + + GHTD DN LS Sbjct: 366 -LFTWGDAALSPEGATILKRIGAVLGQLPDKFVQVAGHTDNQALSKTLQKTFPDNKALSW 424 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA +A + L+ G+ D+ + G A R ++ NRR+++++ Sbjct: 425 ARAENARRALVNGGIPADKTKAV-GLADTRPLTSNATEQGRQKNRRLELII 474 >gi|261212428|ref|ZP_05926713.1| protein F-related protein [Vibrio sp. RC341] gi|260838359|gb|EEX65015.1| protein F-related protein [Vibrio sp. RC341] Length = 182 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 75/178 (42%), Gaps = 13/178 (7%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 D+ + + Y + ++ +++ + ++Q + LV++ I ++ Sbjct: 8 DVAPKGDFDVRYPEWGYAPQQSVSVAQTPKMQARSSSYEQLRQYLVSNGIEHEIMPGDYP 67 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNI 280 +I +NT F+ S+ + L K+ + LA + V + GHTD + Sbjct: 68 ------MIKLKNTIKFETGSAKVSASSKQWLDKMAQFLAGESGVDIVLEGHTDNT---GT 118 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 + N +LS RA S L++ V+++ I G+ H ++ + NRR+++ Sbjct: 119 QKFNDKLSEKRATSVKSALVQRQVAQNAIYT-RGYGEHVPACTNNTKKGRACNRRVEV 175 >gi|209964175|ref|YP_002297090.1| OmpA family protein (probable proton motor MotY) [Rhodospirillum centenum SW] gi|209957641|gb|ACI98277.1| OmpA family protein (probable proton motor MotY) [Rhodospirillum centenum SW] Length = 356 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289 + T FD S + VL+ + + + + GH D A N RLS+ Sbjct: 249 RNFTVFFDWDRSDLTADARQVLRSVAGDARSGNIFAVQVTGHADT---SGPADYNQRLSI 305 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 RA + L+ G+ D+I I G + + +NRR I+ Sbjct: 306 RRAEAVRDFLITQGIPADQI-AIEGRGETDPLVPTADGVREPSNRRSVII 354 >gi|262190496|ref|ZP_06048743.1| protein F-related protein [Vibrio cholerae CT 5369-93] gi|262033626|gb|EEY52117.1| protein F-related protein [Vibrio cholerae CT 5369-93] Length = 204 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 60/153 (39%), Gaps = 10/153 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246 ++ + + +++ + + ++ +I NT F+ S+ Sbjct: 49 QKNTSVMPNAMTQPRSASYEDLRHYLSSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 108 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L + LA + + + GHTD + + N +L+ RA + L++S V+ Sbjct: 109 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 165 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++ I GF + + + NRR++I Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197 >gi|197337755|ref|YP_002158384.1| OmpA family protein [Vibrio fischeri MJ11] gi|197315007|gb|ACH64456.1| OmpA family protein [Vibrio fischeri MJ11] Length = 1600 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 66/189 (34%), Gaps = 28/189 (14%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 S ++ + +P S+E I + + + L+ LV + V Sbjct: 576 SNDRLQEAAIPRDSEEAIKEQQNA--YDQAVDSMRAKLAQLVVKDQKHHVETVGFS---- 629 Query: 226 ISIIDQRNTPMFDKSSSIPLPET------IVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279 + + MFD S P+ + + + L+ + VI I GHT + Sbjct: 630 -EFQLRLDATMFDFDSHEIQPDFSGASTPFQSIAEELKKLSGAPFVIMIIGHTCSI---G 685 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDR-------ISKISGFAHHRLK--IASDPMNSA 330 N LS RA + ++ + +S+++ + + G ++ Sbjct: 686 SEAYNLELSKQRAVAVKNSIIDA-LSDEKYKSIWSDLLVVKGEGESTPLPGNNNETEEER 744 Query: 331 --NRRIDIL 337 NRR++I+ Sbjct: 745 KLNRRVEIV 753 >gi|91794083|ref|YP_563734.1| OmpA/MotB [Shewanella denitrificans OS217] gi|91716085|gb|ABE56011.1| OmpA/MotB [Shewanella denitrificans OS217] Length = 373 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 54/154 (35%), Gaps = 8/154 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 ++ + + V + ++ + +FD SS+ P + Sbjct: 218 DADKDGVNDNIDKCPNTPMTHKVDAKGCSVYEFVTQKYDLGSILFDNDSSVIKPGAYSDV 277 Query: 253 QKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRIS 310 + + L + + GH N LS RA + ++ K ++ RI Sbjct: 278 EILVSHLEKYPQHTVVIEGHASNV---GTPDYNLLLSERRANAVAALVTSKYKINGSRIK 334 Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 + G+ + ++A + + NRRI+ +V + Sbjct: 335 SV-GYGLTKPQMAGNSAEAHRLNRRIEAIVTGTE 367 >gi|315223627|ref|ZP_07865481.1| immunogenic peptidoglycan-associated lipoprotein PG4 [Capnocytophaga ochracea F0287] gi|314946408|gb|EFS98403.1| immunogenic peptidoglycan-associated lipoprotein PG4 [Capnocytophaga ochracea F0287] Length = 660 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + + FD + P+ L KI +V+ + +R HTD+ N LS Sbjct: 546 KIDNIYFDYDKANIRPDAAEQLAKIVKVMEEYPTMKIDVRLHTDSR---GSDSYNLALSQ 602 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 RA S + L+ G+ +DRI G+ +L ++ + ANRR + ++ Sbjct: 603 RRAKSTIKWLIAHGIHKDRI-TGKGYGETQLVNGCSNGVPCTEEQHQANRRSEFII 657 >gi|256820527|ref|YP_003141806.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256582110|gb|ACU93245.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271] Length = 660 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + + FD + P+ L KI +V+ + +R HTD+ N LS Sbjct: 546 KIDNIYFDYDKANIRPDAAEQLAKIVKVMEEYPTMKIDVRLHTDSR---GSDSYNLALSQ 602 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 RA S + L+ G+ +DRI G+ +L ++ + ANRR + ++ Sbjct: 603 RRAKSTIKWLIAHGIHKDRI-TGKGYGETQLVNGCSNGVPCTEEQHQANRRSEFII 657 >gi|213583424|ref|ZP_03365250.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 142 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 2/102 (1%) Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLM 300 P +L+ I VL IS+ GHTD P+ N NW LS DRA ++ + L+ Sbjct: 1 EVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELV 60 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 G+ ++ ++ G A P ++ NRRI +LV ++Q Sbjct: 61 AGGLDNGKVLRVVGMAATMRLSDRGPDDAINRRISLLVLNKQ 102 >gi|212693137|ref|ZP_03301265.1| hypothetical protein BACDOR_02644 [Bacteroides dorei DSM 17855] gi|237709882|ref|ZP_04540363.1| outer membrane protein [Bacteroides sp. 9_1_42FAA] gi|237725448|ref|ZP_04555929.1| outer membrane protein [Bacteroides sp. D4] gi|254881970|ref|ZP_05254680.1| outer membrane protein [Bacteroides sp. 4_3_47FAA] gi|265753535|ref|ZP_06088890.1| outer membrane protein [Bacteroides sp. 3_1_33FAA] gi|294776453|ref|ZP_06741929.1| OmpA family protein [Bacteroides vulgatus PC510] gi|319641023|ref|ZP_07995729.1| OmpA family Outer membrane protein [Bacteroides sp. 3_1_40A] gi|212664242|gb|EEB24814.1| hypothetical protein BACDOR_02644 [Bacteroides dorei DSM 17855] gi|229436135|gb|EEO46212.1| outer membrane protein [Bacteroides dorei 5_1_36/D4] gi|229455975|gb|EEO61696.1| outer membrane protein [Bacteroides sp. 9_1_42FAA] gi|254834763|gb|EET15072.1| outer membrane protein [Bacteroides sp. 4_3_47FAA] gi|263235249|gb|EEZ20773.1| outer membrane protein [Bacteroides sp. 3_1_33FAA] gi|294449696|gb|EFG18220.1| OmpA family protein [Bacteroides vulgatus PC510] gi|317387353|gb|EFV68226.1| OmpA family Outer membrane protein [Bacteroides sp. 3_1_40A] Length = 243 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 10/155 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + +F+ ++ + L K Sbjct: 78 KKMDKAAEEAAQIQGAQVEQVTDNNGLQAVKVTFDSG-ILFNTGNAALSAQAKSALSKFA 136 Query: 257 EVL--AHSTEVISIRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + +SI G+TD +RN + N LS +RA S L+ GVS +I Sbjct: 137 NNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSIQKNLNLSQERAQSVASYLLGCGVSNSQI 196 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + G +D NRR+++ + Q Sbjct: 197 KSVEGLGQADPIGNNDTAEGRQQNRRVEVYMYASQ 231 >gi|158422149|ref|YP_001523441.1| OmpA/MotB precursor [Azorhizobium caulinodans ORS 571] gi|158329038|dbj|BAF86523.1| OmpA/MotB precursor [Azorhizobium caulinodans ORS 571] Length = 164 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + FD + PE +L + + L +I GH D N L R Sbjct: 56 DRVFFDTDQTDLSPEARAILDRQAQWLQQYNRYTFTIEGHADER---GTREYNIALGAKR 112 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A + L G+ R+ IS + R +D S NRR Sbjct: 113 AQNVRDYLASRGIDPARMRTIS-YGKERPVAVCNDISCWSQNRR 155 >gi|121585594|ref|ZP_01675390.1| protein F-related protein [Vibrio cholerae 2740-80] gi|229506176|ref|ZP_04395685.1| protein F-related protein [Vibrio cholerae BX 330286] gi|229509966|ref|ZP_04399446.1| protein F-related protein [Vibrio cholerae B33] gi|229516473|ref|ZP_04405920.1| protein F-related protein [Vibrio cholerae RC9] gi|229605715|ref|YP_002876419.1| protein F-related protein [Vibrio cholerae MJ-1236] gi|255746568|ref|ZP_05420515.1| protein F-related protein [Vibrio cholera CIRS 101] gi|262158841|ref|ZP_06029954.1| protein F-related protein [Vibrio cholerae INDRE 91/1] gi|121550211|gb|EAX60225.1| protein F-related protein [Vibrio cholerae 2740-80] gi|229346354|gb|EEO11325.1| protein F-related protein [Vibrio cholerae RC9] gi|229352411|gb|EEO17351.1| protein F-related protein [Vibrio cholerae B33] gi|229356527|gb|EEO21445.1| protein F-related protein [Vibrio cholerae BX 330286] gi|229372201|gb|ACQ62623.1| protein F-related protein [Vibrio cholerae MJ-1236] gi|255736322|gb|EET91720.1| protein F-related protein [Vibrio cholera CIRS 101] gi|262029414|gb|EEY48065.1| protein F-related protein [Vibrio cholerae INDRE 91/1] Length = 204 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246 ++ + + +++ + +L + ++ +I NT F+ S+ Sbjct: 49 QKNTSVMPNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 108 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L + LA + + + GHTD + + N +L+ RA + L++S V+ Sbjct: 109 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 165 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++ I GF + + + NRR++I Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197 >gi|90413724|ref|ZP_01221712.1| Putative OmpA family protein [Photobacterium profundum 3TCK] gi|90325193|gb|EAS41690.1| Putative OmpA family protein [Photobacterium profundum 3TCK] Length = 241 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 10/144 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L G+ I++++ N F S + L+ + Sbjct: 101 YMDVQETKLRQQLESTGISVTRDGDNIVLNM---PNEITFGIDQSDLSSRAVAALKNVAL 157 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 V + I++ G TD++ A N RLS RA LM+ GV+ +R+ G Sbjct: 158 VAKEYDKTLINVYGFTDST---GSASYNQRLSQVRASEVSSNLMRGGVAANRVIT-KGMG 213 Query: 317 HHRLKIASDPM--NSANRRIDILV 338 + ++ + NRR++I++ Sbjct: 214 EAKPIASNKTEQGRAENRRVEIVL 237 >gi|70671520|gb|AAZ06132.1| outer membrane protein A [Acinetobacter sp. V-26] Length = 349 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 8/105 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S P+ + K+ E LA I GHTD + N RLSL RA Sbjct: 233 RVFFDTNKSDIKPQYKSEIAKVAEKLAEYPNATARIEGHTDNT---GPRALNERLSLARA 289 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 S L+ + V R+S GFA + + NRR+ Sbjct: 290 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRV 333 >gi|26991353|ref|NP_746778.1| OmpA/MotB domain protein [Pseudomonas putida KT2440] gi|24986416|gb|AAN70242.1|AE016663_10 OmpA family protein [Pseudomonas putida KT2440] Length = 172 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287 D +F ++ ++++IG+ L + + + GH D+ A N +L Sbjct: 61 YDLSGKVLFGSDLDSLNGQSQAIVERIGKALLGVGIQGVRVDGHADS---SGKAAYNQQL 117 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 S RA S + L+ G+ I G + + NRR+ I+V Sbjct: 118 SERRAQSVTKALVGIGMQAQNIQS-RGLGSSQPVADNRTSAGRTENRRVSIVV 169 >gi|148555047|ref|YP_001262629.1| peptidoglycan-associated lipoprotein [Sphingomonas wittichii RW1] gi|148500237|gb|ABQ68491.1| Peptidoglycan-associated lipoprotein [Sphingomonas wittichii RW1] Length = 175 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + E +L + LA V ++ GH D N L RA +A Sbjct: 73 FATDAYDVDAEDQAILTRQASWLAKYPNVSVTLEGHCDER---GTREYNLALGERRANAA 129 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDIL 337 L+ +GVS RI + + R + + + NRR + I+ Sbjct: 130 KNFLVSAGVSASRI-SVISYGKERPVATGSDEAAWAQNRRAVTIV 173 >gi|91791747|ref|YP_561398.1| OmpA/MotB [Shewanella denitrificans OS217] gi|91713749|gb|ABE53675.1| OmpA/MotB [Shewanella denitrificans OS217] Length = 201 Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q +F +S + P+ ++ I ++ ++I GH + N LS Sbjct: 73 QELKILFPTNSYVLDPQYYGQIELIANMMKQYPNTNVTIEGHCSK---KGSYELNMALSH 129 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI--DI 336 +RA + QVL G++ R++ I G++ R SD + NRR+ +I Sbjct: 130 NRANAVTQVLTSQFGIAPSRLNAI-GYSFDRPVDMSDTEEAHRRNRRVIAEI 180 >gi|314955058|gb|EFS99464.1| OmpA family protein [Propionibacterium acnes HL027PA1] Length = 368 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287 D + +FD S + P ++ + + L + I + G+TD+ A N L Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313 Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 S RA S +VL + G++ +G ++D NRR+ I V++ Sbjct: 314 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 367 >gi|326317618|ref|YP_004235290.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374454|gb|ADX46723.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 188 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD S E+ + ++G LA + + + GHTD N RLSL R Sbjct: 81 GKLLFDFDSVELNAESHDGVLRMGRALADVGIDALRVEGHTDEQ---GARAYNERLSLRR 137 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + +VL ++G+ D I + G R + S NRR+ I+V Sbjct: 138 AQAVARVLAEAGLPADHIGTV-GLGASRPVVQGTSAASRRENRRVAIIV 185 >gi|254500992|ref|ZP_05113143.1| peptidoglycan-associated lipoprotein, putative [Labrenzia alexandrii DFL-11] gi|222437063|gb|EEE43742.1| peptidoglycan-associated lipoprotein, putative [Labrenzia alexandrii DFL-11] Length = 158 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 11/137 (8%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 ++ + D + V T + ++ + F++ S + L + L Sbjct: 20 AAACAQTKPDGLATNVKPGTGQDFVVNV----GDRVFFEEDQSTLNSQGQATLANQAKWL 75 Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I++ GH D + N L RA +A L+ GVS RI IS + Sbjct: 76 SRYSKYTITVEGHADER---GTRQYNIALGARRAQAARDYLVSQGVSASRIKTIS-YGKE 131 Query: 319 RLKI--ASDPMNSANRR 333 R + S NRR Sbjct: 132 RPVAVCNDNSCWSQNRR 148 >gi|328469328|gb|EGF40274.1| putative sodium-type flagellar protein MotY [Vibrio parahaemolyticus 10329] Length = 340 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F L + L+ + I GHTD N +S RA Sbjct: 212 FQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHTDNV---GPRLTNLSVSRLRAQQ 268 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 L+ GV+ + I ++ ++ + NRR+ + + Sbjct: 269 VADALIAHGVNPN-IIEVRSHGDRYPVANNNTAAGQAKNRRVTLRLVRDN 317 >gi|258541844|ref|YP_003187277.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01] gi|256632922|dbj|BAH98897.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01] gi|256635979|dbj|BAI01948.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-03] gi|256639034|dbj|BAI04996.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-07] gi|256642088|dbj|BAI08043.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-22] gi|256645143|dbj|BAI11091.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-26] gi|256648198|dbj|BAI14139.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-32] gi|256651251|dbj|BAI17185.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654242|dbj|BAI20169.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-12] Length = 411 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 8/112 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF----RNIARDNWRLSL 289 FD S ++ + AH I++ G+TD S + N RLSL Sbjct: 301 VFFDWDKSDLTDRARSIVGVAAQAAAHVALTRITVSGYTDNSSAHPGQKAGEEYNMRLSL 360 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 RA LM+ GV I I G+ + + + + NRR++I+ Sbjct: 361 RRAEVVKAELMRDGVPGTTID-IHGYGETHPLVTTGPNTKEAQNRRVEIIFR 411 >gi|29423528|gb|AAO73590.1| lateral flagellar MotY-like protein [Vibrio parahaemolyticus] Length = 340 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F L + L+ + I GHTD N +S RA Sbjct: 212 FQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHTDNV---GPRLTNLSVSRLRAQQ 268 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 L+ GV+ + I ++ ++ + NRR+ + + Sbjct: 269 VADALIAHGVNPN-IIEVRSHGDRYPVANNNTAAGQAKNRRVTLRLVRDN 317 >gi|28901394|ref|NP_801049.1| putative sodium-type flagellar protein MotY [Vibrio parahaemolyticus RIMD 2210633] gi|153835953|ref|ZP_01988620.1| putative sodium-type flagellar protein MotY [Vibrio parahaemolyticus AQ3810] gi|260362948|ref|ZP_05775817.1| putative sodium-type flagellar protein MotY [Vibrio parahaemolyticus K5030] gi|260880235|ref|ZP_05892590.1| putative sodium-type flagellar protein MotY [Vibrio parahaemolyticus AN-5034] gi|260895352|ref|ZP_05903848.1| putative sodium-type flagellar protein MotY [Vibrio parahaemolyticus Peru-466] gi|28809941|dbj|BAC62882.1| putative sodium-type flagellar protein MotY precursor [Vibrio parahaemolyticus RIMD 2210633] gi|149750707|gb|EDM61452.1| putative sodium-type flagellar protein MotY [Vibrio parahaemolyticus AQ3810] gi|308085759|gb|EFO35454.1| putative sodium-type flagellar protein MotY [Vibrio parahaemolyticus Peru-466] gi|308091961|gb|EFO41656.1| putative sodium-type flagellar protein MotY [Vibrio parahaemolyticus AN-5034] gi|308112265|gb|EFO49805.1| putative sodium-type flagellar protein MotY [Vibrio parahaemolyticus K5030] Length = 340 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F L + L+ + I GHTD N +S RA Sbjct: 212 FQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHTDNV---GPRLTNLSVSRLRAQQ 268 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 L+ GV+ + I ++ ++ + NRR+ + + Sbjct: 269 VADALIAHGVNPN-IIEVRSHGDRYPVANNNTAAGQAKNRRVTLRLVRDN 317 >gi|332092496|gb|EGI97569.1| outer membrane protein A [Shigella boydii 5216-82] gi|332095872|gb|EGJ00879.1| outer membrane protein A [Shigella dysenteriae 155-74] Length = 351 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 223 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 279 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 280 ERRAQSVVDYLISKGIPADKISA-RGIGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 338 Query: 338 VED 340 V+ Sbjct: 339 VKG 341 >gi|320179525|gb|EFW54477.1| Outer membrane protein A precursor [Shigella boydii ATCC 9905] Length = 342 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 214 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 270 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 271 ERRAQSVVDYLISKGIPADKISA-RGIGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 329 Query: 338 VED 340 V+ Sbjct: 330 VKG 332 >gi|288225941|gb|ADC44455.1| OmpA [Candidatus Erwinia dacicola] gi|288225945|gb|ADC44457.1| OmpA [Candidatus Erwinia dacicola] Length = 324 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD + N +LS Sbjct: 196 KSDVLFNFNKNTLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRI---GSEQYNQKLS 252 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSAN---------RRIDIL 337 RA S L+ G+ +I G I D + N RR++I Sbjct: 253 EKRAQSVVDHLVSKGIPASKIYA-RGKGKSNPIIGSTCDSVKGRNALIDCLAPDRRVEIE 311 Query: 338 VED 340 V+ Sbjct: 312 VKG 314 >gi|78049766|ref|YP_365941.1| hypothetical protein XCV4210 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038196|emb|CAJ25941.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 418 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 14/150 (9%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + LS +++ +T + +S + MF P+ ++ +I Sbjct: 277 LKQLLSAQERAGLLRVDEQADGQTRVRLS-----SAAMFASGGVEVEPQQRGLIAQIAAA 331 Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + + + GHTD P R+ +DN+ LS RA + QVL + R+ I G Sbjct: 332 IEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVDAI-GAGD 390 Query: 318 HRLKI-----ASDPMNSANRRIDILVEDRQ 342 + ++ + NRR++IL + + Sbjct: 391 SQPIARPVQLPAN--RARNRRVEILFQPGE 418 >gi|314916069|gb|EFS79900.1| OmpA family protein [Propionibacterium acnes HL005PA4] Length = 368 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287 D + +FD S + P ++ + + L + I + G+TD+ A N L Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313 Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 S RA S +VL + G++ +G ++D NRR+ I V++ Sbjct: 314 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 367 >gi|46812309|gb|AAT02227.1| outer membrane protein A precursor [Shigella boydii] Length = 346 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 218 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ D+IS G + N + +RR++I Sbjct: 275 ERRAQSVVDYLISKGIPVDKISA-RGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIE 333 Query: 338 VED 340 V+ Sbjct: 334 VKG 336 >gi|37704614|gb|AAR01579.1| OprF [Pseudomonas sp. MFY61] Length = 316 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + + GHT Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTTVEGHT 269 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL + GV RI + G+ R Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESSRIDSV-GYGETRPVA 316 >gi|42524415|ref|NP_969795.1| flagellar motor protein MotB [Bdellovibrio bacteriovorus HD100] gi|39576624|emb|CAE80788.1| flagellar motor protein MotB [Bdellovibrio bacteriovorus HD100] Length = 319 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 12/119 (10%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPF-RNIARDNWRLS 288 +FD + L+++ L I++ GHTD+ + + NW LS Sbjct: 111 DGEVLFDSGAVEVKETAKPNLRRVVSALRSIEGVNKIAVEGHTDSDAIQSGLVKSNWELS 170 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--------ANRRIDILVE 339 RA S + +SGV ++ +GF NRR+ + V Sbjct: 171 SLRASSVVRYFEESGVD-SKLLSAAGFGSSHPLAPEVDKAGVSIPANKVLNRRVVVAVT 228 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 9/61 (14%) Query: 18 KKKVAIDDTPNNLGS-----WKIVYADFMTVLMAFFLVMWIINATDDDTK----KAIEQY 68 K+ + + + W + YAD MT+L FF++M+ ++ D+ K + +Y Sbjct: 6 KRSRVHLEEHEHEMAHDESNWLVSYADMMTLLFGFFVLMYSMSRFDNTKFDLVRKEVAKY 65 Query: 69 F 69 F Sbjct: 66 F 66 >gi|87311740|ref|ZP_01093855.1| probable outer membrane protein A (OmpA) [Blastopirellula marina DSM 3645] gi|87285524|gb|EAQ77443.1| probable outer membrane protein A (OmpA) [Blastopirellula marina DSM 3645] Length = 265 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 68/206 (33%), Gaps = 9/206 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q + ++ L K + + +E + ++ Sbjct: 57 AQIAQTQQQSKILQDEVGLLKKQLRDAGEQLTQAQQQIASAKQENTTLLASTRQRGGATI 116 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 +++L V+ + G I I I + +F ++ L ++ Sbjct: 117 TPNNSLQQSVSQIQISGAQVRVDGDLIRIEIPADQ---IFMTGTNTLHQNAYGTLDQVAN 173 Query: 258 VLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISG 314 + +I + GHTD +LS A + + L+ G V +R+ + G Sbjct: 174 AIRQQFPRNLIGVEGHTDNQAASPPFASQHQLSASMAQATFDQLVARGQVPPNRLF-VVG 232 Query: 315 FAHHRLKIASDPMN--SANRRIDILV 338 + +++ + NRRIDI++ Sbjct: 233 HGGNHPVVSNATPAGQARNRRIDIVI 258 >gi|330447990|ref|ZP_08311638.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492181|dbj|GAA06135.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 196 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 60/170 (35%), Gaps = 7/170 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+ ++ K+ K L D AD + V+ + + + + Sbjct: 17 SLTVQQPPVAKQTKNLYDQDSDGVINQRDRCADTPIDAVVDNDGCPTFVKNSEENNIHVL 76 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS + + + LA + I ++G+ A N LS RA + Sbjct: 77 FANDSSEIPESYMENIANMSAFLAKYPDTHIELKGYASPV---GSAAYNVALSKRRAQAI 133 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343 Q L+ GVS RI + GF A D + +RR+ V QG Sbjct: 134 RQALITEGVSPARIKTV-GFGDSDPVKADDVEESNALSRRVVAQVVGSQG 182 >gi|91227007|ref|ZP_01261544.1| putative protein F-related protein [Vibrio alginolyticus 12G01] gi|91188809|gb|EAS75095.1| putative protein F-related protein [Vibrio alginolyticus 12G01] Length = 224 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 10/123 (8%) Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIA 281 ++I + +Q + F S+ ++ ++ IG LA T+V + GH D++ Sbjct: 109 HLMIRLKEQVH---FQTGSARLSAQSQDWIRNIGHYLAGRTDVDVVIDGHADST---GAE 162 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 N LS RA + L+ + + R+ GF + K ++ + NRR+++ + Sbjct: 163 SFNDTLSEKRAREVEKQLLATSIPRQRVFS-RGFGEYVPKCSNATASGKACNRRVELTLI 221 Query: 340 DRQ 342 + Sbjct: 222 VDE 224 >gi|206577508|ref|YP_002239403.1| outer membrane protein A [Klebsiella pneumoniae 342] gi|288936252|ref|YP_003440311.1| OmpA domain protein transmembrane region-containing protein [Klebsiella variicola At-22] gi|290510692|ref|ZP_06550062.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55] gi|206566566|gb|ACI08342.1| outer membrane protein A [Klebsiella pneumoniae 342] gi|288890961|gb|ADC59279.1| OmpA domain protein transmembrane region-containing protein [Klebsiella variicola At-22] gi|289777408|gb|EFD85406.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55] Length = 350 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + G TD N +LS Sbjct: 222 KSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVMGFTDRI---GSEAYNQQLS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +IS G + +A +RR++I Sbjct: 279 EKRAQSVVDYLVAKGIPAGKISA-RGMGKSNPVTGNTCDNVKARAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|189500991|ref|YP_001960461.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides BS1] gi|189496432|gb|ACE04980.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides BS1] Length = 350 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 8/151 (5%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + A + + V + + I S FD ++ P + Sbjct: 202 KAEKGAYIAVDIIEEQAMKKNMVVVKADAMKKAIASSGRIALYGIFFDSGKAVIKPASKP 261 Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDR 308 V+ +I ++L V+ + GHTD N LS RA + L + ++ R Sbjct: 262 VIAEIAKLLKQDPSLVLHVVGHTDN---AGGYTFNMGLSRKRALAVVSALARQHNIASSR 318 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDIL 337 + +G + + + NRR++++ Sbjct: 319 LIA-NGVGYLAPVATNTSAAGRAKNRRVELV 348 >gi|126737253|ref|ZP_01752988.1| OmpA family protein [Roseobacter sp. SK209-2-6] gi|126721838|gb|EBA18541.1| OmpA family protein [Roseobacter sp. SK209-2-6] Length = 210 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ L + + E + GHTD+ N RL RA +A Sbjct: 69 FDFDSAQLDATARAALDRQAHWIKQFPEVRFRVYGHTDSV---GSDAYNKRLGRRRAQAA 125 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L++ G+S R+ + F R I + NRR Sbjct: 126 VNYLVRQGISRHRLEALVSFGETRPVIVTAHRERRNRR 163 >gi|50841753|ref|YP_054980.1| putative outer membrane protein A [Propionibacterium acnes KPA171202] gi|289424480|ref|ZP_06426263.1| OmpA family protein [Propionibacterium acnes SK187] gi|289428850|ref|ZP_06430530.1| OmpA family protein [Propionibacterium acnes J165] gi|295129833|ref|YP_003580496.1| OmpA family protein [Propionibacterium acnes SK137] gi|50839355|gb|AAT82022.1| putative outer membrane protein A [Propionibacterium acnes KPA171202] gi|289155177|gb|EFD03859.1| OmpA family protein [Propionibacterium acnes SK187] gi|289157851|gb|EFD06074.1| OmpA family protein [Propionibacterium acnes J165] gi|291376750|gb|ADE00605.1| OmpA family protein [Propionibacterium acnes SK137] gi|313765278|gb|EFS36642.1| OmpA family protein [Propionibacterium acnes HL013PA1] gi|313772807|gb|EFS38773.1| OmpA family protein [Propionibacterium acnes HL074PA1] gi|313793172|gb|EFS41239.1| OmpA family protein [Propionibacterium acnes HL110PA1] gi|313806398|gb|EFS44905.1| OmpA family protein [Propionibacterium acnes HL087PA2] gi|313810947|gb|EFS48661.1| OmpA family protein [Propionibacterium acnes HL083PA1] gi|313814554|gb|EFS52268.1| OmpA family protein [Propionibacterium acnes HL025PA1] gi|313815353|gb|EFS53067.1| OmpA family protein [Propionibacterium acnes HL059PA1] gi|313817476|gb|EFS55190.1| OmpA family protein [Propionibacterium acnes HL046PA2] gi|313821987|gb|EFS59701.1| OmpA family protein [Propionibacterium acnes HL036PA1] gi|313824117|gb|EFS61831.1| OmpA family protein [Propionibacterium acnes HL036PA2] gi|313826484|gb|EFS64198.1| OmpA family protein [Propionibacterium acnes HL063PA1] gi|313831713|gb|EFS69427.1| OmpA family protein [Propionibacterium acnes HL007PA1] gi|313834406|gb|EFS72120.1| OmpA family protein [Propionibacterium acnes HL056PA1] gi|313840403|gb|EFS78117.1| OmpA family protein [Propionibacterium acnes HL086PA1] gi|314917220|gb|EFS81051.1| OmpA family protein [Propionibacterium acnes HL050PA1] gi|314921721|gb|EFS85552.1| OmpA family protein [Propionibacterium acnes HL050PA3] gi|314926563|gb|EFS90394.1| OmpA family protein [Propionibacterium acnes HL036PA3] gi|314931072|gb|EFS94903.1| OmpA family protein [Propionibacterium acnes HL067PA1] gi|314959098|gb|EFT03200.1| OmpA family protein [Propionibacterium acnes HL002PA1] gi|314961372|gb|EFT05473.1| OmpA family protein [Propionibacterium acnes HL002PA2] gi|314964584|gb|EFT08684.1| OmpA family protein [Propionibacterium acnes HL082PA1] gi|314969683|gb|EFT13781.1| OmpA family protein [Propionibacterium acnes HL037PA1] gi|314974747|gb|EFT18842.1| OmpA family protein [Propionibacterium acnes HL053PA1] gi|314977055|gb|EFT21150.1| OmpA family protein [Propionibacterium acnes HL045PA1] gi|314980286|gb|EFT24380.1| OmpA family protein [Propionibacterium acnes HL072PA2] gi|314985460|gb|EFT29552.1| OmpA family protein [Propionibacterium acnes HL005PA1] gi|314987369|gb|EFT31460.1| OmpA family protein [Propionibacterium acnes HL005PA2] gi|314989090|gb|EFT33181.1| OmpA family protein [Propionibacterium acnes HL005PA3] gi|315082724|gb|EFT54700.1| OmpA family protein [Propionibacterium acnes HL027PA2] gi|315086083|gb|EFT58059.1| OmpA family protein [Propionibacterium acnes HL002PA3] gi|315087668|gb|EFT59644.1| OmpA family protein [Propionibacterium acnes HL072PA1] gi|315097294|gb|EFT69270.1| OmpA family protein [Propionibacterium acnes HL038PA1] gi|315099483|gb|EFT71459.1| OmpA family protein [Propionibacterium acnes HL059PA2] gi|315102012|gb|EFT73988.1| OmpA family protein [Propionibacterium acnes HL046PA1] gi|315106289|gb|EFT78265.1| OmpA family protein [Propionibacterium acnes HL030PA1] gi|327331336|gb|EGE73075.1| putative outer membrane protein A [Propionibacterium acnes HL096PA2] gi|327333322|gb|EGE75042.1| putative outer membrane protein A [Propionibacterium acnes HL096PA3] gi|327445201|gb|EGE91855.1| OmpA family protein [Propionibacterium acnes HL013PA2] gi|327447284|gb|EGE93938.1| OmpA family protein [Propionibacterium acnes HL043PA1] gi|327450270|gb|EGE96924.1| OmpA family protein [Propionibacterium acnes HL043PA2] gi|327454535|gb|EGF01190.1| OmpA family protein [Propionibacterium acnes HL087PA3] gi|327456606|gb|EGF03261.1| OmpA family protein [Propionibacterium acnes HL083PA2] gi|327457118|gb|EGF03773.1| OmpA family protein [Propionibacterium acnes HL092PA1] gi|328755590|gb|EGF69206.1| OmpA family protein [Propionibacterium acnes HL087PA1] gi|328756916|gb|EGF70532.1| OmpA family protein [Propionibacterium acnes HL025PA2] gi|328758401|gb|EGF72017.1| OmpA family protein [Propionibacterium acnes HL020PA1] gi|328761148|gb|EGF74692.1| putative outer membrane protein A [Propionibacterium acnes HL099PA1] gi|332674672|gb|AEE71488.1| putative outer membrane protein A [Propionibacterium acnes 266] Length = 368 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287 D + +FD S + P ++ + + L + I + G+TD+ A N L Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313 Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 S RA S +VL + G++ +G ++D NRR+ I V++ Sbjct: 314 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 367 >gi|34556728|ref|NP_906543.1| motility protein MotB [Wolinella succinogenes DSM 1740] gi|34482442|emb|CAE09443.1| MOTB PROTEIN [Wolinella succinogenes] Length = 255 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 79/236 (33%), Gaps = 12/236 (5%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 D K G + L + + S + G LEK Sbjct: 6 PPCDCKKGLPLWLGTFGDLMSLLLTFFILLLSMATFEKQKIEQAIGSIQGALGVLEKGQM 65 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 E + + + + A I+ + V E G ++SI Sbjct: 66 TEIMPPKRIQALPIQQNVDTPEAINAFASMITEYSEMTKISD-GPAVKMEEAEDGFILSI 124 Query: 229 IDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFR--NIARD 283 + +F+ S+ E I+ L++ + + + + GHTD R +D Sbjct: 125 ---PSELLFESGSATITNKEGILFLKRTALEINKLSNDMHIKVIGHTDNDRLRPTATYKD 181 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 NW LS+ R + ++L++ V+ RIS G ++ + NRR+D+ Sbjct: 182 NWELSIARGVNVAKMLLEERVNPARISAG-GNGEFDPVASNATPEGKAKNRRVDLY 236 >gi|126663141|ref|ZP_01734139.1| peptidoglycan-associated lipoprotein, OmpA family [Flavobacteria bacterium BAL38] gi|126624799|gb|EAZ95489.1| peptidoglycan-associated lipoprotein, OmpA family [Flavobacteria bacterium BAL38] Length = 520 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 9/111 (8%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 FD + S E+ + L KI EVL ++ + I+I HTD+ + N +LS R Sbjct: 412 ENIYFDFNKSTVKKESELSLNKIVEVLTNNANMSITINAHTDS---KGSEAYNQKLSESR 468 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNSANRRIDILV 338 A +AYQ L+K G+ ++ G+ L + + ANRRI+ + Sbjct: 469 AKAAYQYLLKKGIPASQL-TYKGYGESELLEKCEKCTASQDQANRRIEFKI 518 >gi|83591777|ref|YP_425529.1| OmpA family protein [Rhodospirillum rubrum ATCC 11170] gi|83574691|gb|ABC21242.1| OmpA family protein [Rhodospirillum rubrum ATCC 11170] Length = 340 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 7/108 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S+ PE ++ + + I + GH D N LS RA Sbjct: 237 VFFDFDSTSITPEAGGIINTAATNAKSTGSSTIEVTGHADR---SGGDAYNLALSKRRAE 293 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 + L ++G+S +I + + + NRR+ ++++ Sbjct: 294 AVVGELERNGISRSQI-AVYAKGEADPLVPTPDGVREPQNRRVVVVLK 340 >gi|332140499|ref|YP_004426237.1| Thrombospondin type 3 repeat:OmpA/MotB [Alteromonas macleodii str. 'Deep ecotype'] gi|327550521|gb|AEA97239.1| Thrombospondin type 3 repeat:OmpA/MotB [Alteromonas macleodii str. 'Deep ecotype'] Length = 218 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ LPE LQ + + L + + I GH A N RLS RA + Sbjct: 110 FTSNSTDVLPEYENNLQDVIDALNANPNSGVIIHGHAS---LDGDAAYNQRLSERRAKAV 166 Query: 296 YQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 +L K+ ++ RI+ + G+ R + + + NRRI+ Sbjct: 167 ASLLMTKADIAPRRITAV-GYGESRPLVNEESEAANARNRRIE 208 >gi|93006335|ref|YP_580772.1| OmpA/MotB [Psychrobacter cryohalolentis K5] gi|92394013|gb|ABE75288.1| OmpA/MotB [Psychrobacter cryohalolentis K5] Length = 172 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 7/105 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 F SS ++ VL + +L + + GHTD N L RA Sbjct: 70 VYFAFDSSAITSQSAGVLNQHAGLLKSNPNAGVVIAGHTDER---GSREYNIALGERRAQ 126 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 +A L GV+ + I ++ + R ++ + NRR ++ Sbjct: 127 AARDYLAAQGVAANNI-RVISYGEERPAAAGTNEDAYAQNRRAEL 170 >gi|149910558|ref|ZP_01899197.1| putative peptidoglycan-associated lipoprotein [Moritella sp. PE36] gi|149806401|gb|EDM66374.1| putative peptidoglycan-associated lipoprotein [Moritella sp. PE36] Length = 196 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 8/128 (6%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGH 271 + + E + ++ + +R+ F E +LQ L + V I GH Sbjct: 73 ENLTVEEVKKQVMDELR-KRHVVYFGFDQQAVTAEYGELLQDHANFLIDNPAVKVLIEGH 131 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS-- 329 D N L RA + + L GVS +IS +S + + S + Sbjct: 132 ADERGTPG---YNIALGERRANAVVKYLNNLGVSSSQISTVS-YGEEKPVNTSHTDAAFT 187 Query: 330 ANRRIDIL 337 NRR ++ Sbjct: 188 QNRRAVLV 195 >gi|153829691|ref|ZP_01982358.1| OmpA family protein [Vibrio cholerae 623-39] gi|148874812|gb|EDL72947.1| OmpA family protein [Vibrio cholerae 623-39] Length = 207 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246 ++ + + +++ + +L + ++ +I NT F+ S+ Sbjct: 52 QKNTSVMSNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 111 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L + LA + + + GHTD + + N +L+ RA + L++S V+ Sbjct: 112 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 168 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++ I GF + + + NRR++I Sbjct: 169 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 200 >gi|297580458|ref|ZP_06942385.1| OmpA family protein [Vibrio cholerae RC385] gi|297536104|gb|EFH74938.1| OmpA family protein [Vibrio cholerae RC385] Length = 207 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 61/153 (39%), Gaps = 10/153 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246 ++ + + +++ + + + ++ +I NT F+ S+ Sbjct: 52 QKNTSVMPNAMTQPRSASYEDLRQYLSSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 111 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L + LA + + + GHTD + + N +L+ RA + L++S V+ Sbjct: 112 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 168 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++ I GF + + + NRR++I Sbjct: 169 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 200 >gi|72161966|ref|YP_289623.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Thermobifida fusca YX] gi|71915698|gb|AAZ55600.1| similar to Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Thermobifida fusca YX] Length = 521 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 32/234 (13%), Positives = 69/234 (29%), Gaps = 23/234 (9%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + G TN+ ++Y S + + ++ + + + Sbjct: 132 PVFPGVTNEYRRYFPPLPPHVRQVTFVGSGLGAMTGIPVQDVDEERPEPENPNGGQHLSV 191 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + K + + + + S + + T IS+ Sbjct: 192 DQPPAAGEKLTFDNRRPDEDAVAVEGWVESFVDSEI-------ASVTRDGTTETISLHSD 244 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS----IRGHTDASPFRNIARDNWRL 287 MF+ + PE V+++ E L + + I GHTD N L Sbjct: 245 ---VMFEFDRADLTPEAEAVVRRAAETLERNVDPDHPEIIIIGHTDGI---GTDAYNDDL 298 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-----ASDPMNSANRRIDI 336 S+ RA + +L++ + + G + + NRR++ Sbjct: 299 SVRRAETVRNLLVEE-MGTGYTYVVEGRGSREPIAREGGPDDEQARARNRRVEF 351 >gi|238797976|ref|ZP_04641466.1| OmpA domain protein [Yersinia mollaretii ATCC 43969] gi|238718181|gb|EEQ10007.1| OmpA domain protein [Yersinia mollaretii ATCC 43969] Length = 246 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 14/142 (9%) Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEV 265 + ++ + + + + P+FD +S P T +L + Sbjct: 105 EPLLNRINRQIKIYRDIPVFSSTQMAPLFDSNSIKLKPNTQTSEMLNSLLLLVENNQGRK 164 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS---GVSEDRISKISGFAHHRLKI 322 + I GH+D + A N LS RA L++ + + I G Sbjct: 165 VLIVGHSDNT---GNASLNMALSERRAQVVRDWLIQQSSLSIDD---FIIRGMGALEPVA 218 Query: 323 ASDP--MNSANRRIDILVEDRQ 342 ++D S NRR+++L+ +Q Sbjct: 219 SNDTKIGQSQNRRVEVLLLPKQ 240 >gi|197124092|ref|YP_002136043.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] gi|196173941|gb|ACG74914.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] Length = 386 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 69/268 (25%), Gaps = 16/268 (5%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + + G Q P+ D + + + + I Sbjct: 129 DRCPDAPGPATLQGCPDADGDGVGDAEDACPAEAGPAETLGCPPAKDSDGDGVPDEIDRC 188 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + + D D + E+ D Sbjct: 189 PLDPEDADGFQEEDGCPDPDDDGDGIVDRVDACPHEQGPLENRGCPVMDADGDGVADPDD 248 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 VA + I++ + + LP + V+L + Sbjct: 249 RCPG-----QAGVAADGCPRAYRLLEVGRDRIALREPVRFG----ARDDLLPSSAVLLDE 299 Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + + L +++ HTD A + RLS RA + L G+ +R+ Sbjct: 300 LAQALRDHPRLRVAVEVHTD---GAGEAAASKRLSQARAEAVRAALAGRGIEAERVEA-K 355 Query: 314 GFAHHRLKIASDPM--NSANRRIDILVE 339 GF ++ + NRR +I + Sbjct: 356 GFGAEHPIASNKTARGRAQNRRTEIRIL 383 >gi|254228902|ref|ZP_04922324.1| OmpA family protein [Vibrio sp. Ex25] gi|262396751|ref|YP_003288604.1| protein F-related protein [Vibrio sp. Ex25] gi|151938579|gb|EDN57415.1| OmpA family protein [Vibrio sp. Ex25] gi|262340345|gb|ACY54139.1| protein F-related protein [Vibrio sp. Ex25] Length = 224 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 10/123 (8%) Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIA 281 ++I + +Q + F S+ ++ ++ IG LA T+V + GH D++ A Sbjct: 109 HLMIRLKEQVH---FQTGSAQLSAQSQDWIRNIGHYLAGRTDVDVVIDGHADST---GAA 162 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 N LS RA + L+ + + R+ GF + + ++ N NRR+++ + Sbjct: 163 SFNDTLSEKRAREVEKQLLATSIPRQRVFS-RGFGEYVPQCSNSTANGKACNRRVELTLI 221 Query: 340 DRQ 342 + Sbjct: 222 VDE 224 >gi|260769389|ref|ZP_05878322.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972] gi|260614727|gb|EEX39913.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972] Length = 316 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 9/109 (8%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS + L + E L + + I GHTD++ N +LS R Sbjct: 210 DALSFDSSSLNATQQ--QALSTLAEKLNQQPQAQVLIIGHTDST---GSDAYNTKLSTRR 264 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A +A VLM++ V+E RI + G R + NRR+++ + Sbjct: 265 AQAAADVLMENQVAEHRIK-VFGEGQTRPIDTNTTPAGRAHNRRVEVQI 312 >gi|113971301|ref|YP_735094.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4] gi|113885985|gb|ABI40037.1| OmpA/MotB domain protein [Shewanella sp. MR-4] Length = 372 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 8/134 (5%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 V + + + F S++ E ++++ L + E I GH Sbjct: 237 HKVDSVGCTIYENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYLNKNPEFTVEIAGH 296 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328 N LS RA + ++L++ G+S+ R++ +G+ + +A D Sbjct: 297 ASNV---GKPDYNMTLSDKRADAVAKILVEKYGISQSRVTS-NGYGITKPLVAGDSKEAH 352 Query: 329 SANRRIDILVEDRQ 342 +ANRRI+ +V + Sbjct: 353 AANRRIEAIVTTTE 366 >gi|188584571|ref|YP_001928016.1| peptidoglycan-associated lipoprotein [Methylobacterium populi BJ001] gi|179348069|gb|ACB83481.1| peptidoglycan-associated lipoprotein [Methylobacterium populi BJ001] Length = 170 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 39/114 (34%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 + F+ S+ P L K L I GH D N+ L R Sbjct: 60 DRVFFESDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADER---GTREYNYSLGARR 116 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRRIDILVEDRQG 343 A + L G+S R+ +S + R +D S NRR +++ G Sbjct: 117 AQTVQDYLASRGISASRMRTVS-YGKERPVAVCNDISCWSQNRRAVSVLDGGAG 169 >gi|163854239|ref|YP_001642282.1| peptidoglycan-associated lipoprotein [Methylobacterium extorquens PA1] gi|218533185|ref|YP_002424001.1| peptidoglycan-associated lipoprotein [Methylobacterium chloromethanicum CM4] gi|240141700|ref|YP_002966180.1| Outer membrane lipoprotein omp16 precursor [Methylobacterium extorquens AM1] gi|163665844|gb|ABY33211.1| peptidoglycan-associated lipoprotein [Methylobacterium extorquens PA1] gi|218525488|gb|ACK86073.1| peptidoglycan-associated lipoprotein [Methylobacterium chloromethanicum CM4] gi|240011677|gb|ACS42903.1| Outer membrane lipoprotein omp16 precursor [Methylobacterium extorquens AM1] Length = 170 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 40/112 (35%), Gaps = 10/112 (8%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARD 283 +++I D+ F+ S+ P L K L I GH D Sbjct: 55 VVNIGDR---VFFESDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADER---GTREY 108 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 N+ L RA + L G+S R+ +S + R +D S NRR Sbjct: 109 NYSLGARRAQTVQDYLASRGISASRMRTVS-YGKERPVAVCNDISCWSQNRR 159 >gi|296117473|ref|ZP_06836060.1| OmpA/MotB domain protein [Gluconacetobacter hansenii ATCC 23769] gi|295975994|gb|EFG82785.1| OmpA/MotB domain protein [Gluconacetobacter hansenii ATCC 23769] Length = 380 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTD---ASPFRNIARDNWRLSLDR 291 FD S ++ + + T I + G+TD + P N LSL R Sbjct: 272 FFDWDKSTLTERARAIVAVAAQASTSTQTTRIEVNGYTDTSASHPGPQGEHYNQELSLRR 331 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 A + L++ GV I I GF + + + + NRR++I++ Sbjct: 332 AQTIKAELVRDGVPGPSID-IHGFGEANPLVPTGPNTREAQNRRVEIIL 379 >gi|269955512|ref|YP_003325301.1| OmpA/MotB domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269304193|gb|ACZ29743.1| OmpA/MotB domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 217 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 66/214 (30%), Gaps = 13/214 (6%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + S QS ++ + + + E ++ Sbjct: 6 VGAGPASAQSTTPASASSAPTPSPDPELMQKAEAALAEQAERIEAAEITDALRADATFDL 65 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +D +++ + + ET + +++ + +F S PE Sbjct: 66 APEDATFALATEDATFTLRPDDSTITVETRQETEDDTVVTLTSDLLFGFGESALTPEAQA 125 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + ++ + + + GHTDA N LS RA + VL SG D + Sbjct: 126 AVAELATTIPQ-DAAVRVDGHTDAV---GSDELNLTLSEQRADAVAAVL--SGARPDLVL 179 Query: 311 KISGFAHHRLKIASDP-------MNSANRRIDIL 337 + G +++ + NRR+++ Sbjct: 180 TVEGHGEADPVASNEEGGVDNPAGRALNRRVEVT 213 >gi|115358236|ref|YP_775374.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD] gi|115283524|gb|ABI89040.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 404 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 12/154 (7%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L LA+ + L VA V+ + + L R +F + P V Sbjct: 258 LDALARNLEQRLRDEVAAGNVELIRAPGSDALTL------RFGGLFAPGDAAVAPWGASV 311 Query: 252 LQKIGEVLAHSTE--VISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + G +A T + + G+ D++ R+ N LS RA Q+L+ +GVS R Sbjct: 312 VASAGREIAVLTGSATVHVAGYADSTSARSTRQASNQALSEARARHVAQILVSAGVSAPR 371 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 I + G + + NRR+++ + D Sbjct: 372 I-SVEGNGEADSLADNGTAAGRARNRRVEVTITD 404 >gi|323528401|ref|YP_004230553.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001] gi|323385403|gb|ADX57493.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001] Length = 233 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 7/149 (4%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 KE + LS L + + T G+ I+I + +F+ Sbjct: 73 KEAVEVQPPATTANANEAAKKQLLSLLAPLQDNRQITISHTPQGVEIAINAK---VLFNS 129 Query: 240 SSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQ 297 + LPE+ VL +I VL I + GHTD+ P NW LS RA + + Sbjct: 130 GDARLLPESFAVLGQIATVLRDRAKNNILVEGHTDSLPIATAKYESNWELSSARAGAVVR 189 Query: 298 VLMKSGVSEDRISKISGFAHHRL-KIASD 325 G+ R++ I G A + I +D Sbjct: 190 FFADRGIEAHRMAAI-GRADNFPLIIGND 217 Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 5/60 (8%) Query: 19 KKVAIDDTPNNLG-----SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 K + G W I YAD +T LM FL ++++ + + +P Sbjct: 14 KTGHHGHDGAHDGGEQPDRWLISYADLITTLMVLFLALYVLQLAKNSELQIKTLQHHPVK 73 >gi|262403725|ref|ZP_06080283.1| protein F-related protein [Vibrio sp. RC586] gi|262350229|gb|EEY99364.1| protein F-related protein [Vibrio sp. RC586] Length = 199 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 61/163 (37%), Gaps = 12/163 (7%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 +E + L + + L + N + + I +S NT Sbjct: 39 APQQEVTGKSTASRELSRMDHSSYADLRQFLLSNGIAHEVVPGDYPMIKVS-----NTIR 93 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ + L + LA + + + GHTD + R N +LS RA + Sbjct: 94 FETGSAKVSASSKRWLDSMARFLASESGIDIVLEGHTDNT---GAERFNDKLSERRASAV 150 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 VL++S V+++ I GF + + NRR+++ Sbjct: 151 KTVLVQSRVAQNAIYT-RGFGESVPACTNSTVKGRACNRRVEV 192 >gi|189179675|dbj|BAG39456.1| outer membrane protein [Gluconacetobacter intermedius] Length = 405 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS---PFRNIARDNWRLSLD 290 FD + + ++ + + H I + G+TD S P + N LS+ Sbjct: 296 VFFDWDGAALTGRSREIVAQAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEQYNMGLSMR 355 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA S L++ GV I I G+ + + D NRR++I++ Sbjct: 356 RADSVKAELIRDGVPASGID-IHGYGEAHPMVPTGPDTREPQNRRVEIIL 404 >gi|183222583|ref|YP_001840579.1| putative outer-membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912618|ref|YP_001964173.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777294|gb|ABZ95595.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781005|gb|ABZ99303.1| Putative outer-membrane protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 670 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 7/101 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + E L + + L H I GHTD N LS DRA S Sbjct: 568 FPFNERTLSDEDKKKLDLLADFLIHHKNEKVEIGGHTDNI---GNKEYNINLSEDRALSV 624 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 YQ L GV ++R+ + + + + ++ NRR+ Sbjct: 625 YQYLRLKGVPKERMK-VQAYHYSQPIADNETEEGRSRNRRV 664 >gi|262371451|ref|ZP_06064767.1| outer membrane protein A precursor [Acinetobacter johnsonii SH046] gi|262313590|gb|EEY94641.1| outer membrane protein A precursor [Acinetobacter johnsonii SH046] Length = 159 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 +F S L+ + + L I + GHTD N LS Sbjct: 52 PEKLLFGFDQSDIQASQKPALEALSKQLQQYNLNKIKVVGHTDNI---GDPSYNQTLSEK 108 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA + Q+ +++G I + G + + + + NRR++I++ Sbjct: 109 RASTVSQIFIETGFKTQNIQSM-GRGASQPLVENSSEENRALNRRVNIII 157 >gi|325925657|ref|ZP_08187038.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas perforans 91-118] gi|325543930|gb|EGD15332.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas perforans 91-118] Length = 425 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 14/150 (9%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + LS +++ +T + +S + MF P+ ++ +I Sbjct: 284 LKQLLSAQERAGLLRVDEQADGQTRVRLS-----SAAMFASGGVEVEPQQRGLIAQIAAA 338 Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + + + GHTD P R+ +DN+ LS RA + QVL + R+ I G Sbjct: 339 IEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVDAI-GAGD 397 Query: 318 HRLKI-----ASDPMNSANRRIDILVEDRQ 342 + ++ + NRR++IL + + Sbjct: 398 SQPIARPVQLPAN--RARNRRVEILFQPGE 425 >gi|307944546|ref|ZP_07659886.1| outer membrane lipoprotein Omp16 [Roseibium sp. TrichSKD4] gi|307772295|gb|EFO31516.1| outer membrane lipoprotein Omp16 [Roseibium sp. TrichSKD4] Length = 163 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + F + S + L K + L ++ ++ GH D + N L R Sbjct: 54 DRIYFAEDQSTLSSQARATLDKQVQWLNRYSQYTVTVEGHADER---GTRQYNLALGARR 110 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A SA L+ G+S RI IS + R +D + NRR Sbjct: 111 ANSARDYLVSRGISTTRIKTIS-YGKERPVAVCNNDSCWTQNRR 153 >gi|262278151|ref|ZP_06055936.1| peptidoglycan-associated lipoprotein [Acinetobacter calcoaceticus RUH2202] gi|262258502|gb|EEY77235.1| peptidoglycan-associated lipoprotein [Acinetobacter calcoaceticus RUH2202] Length = 190 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS E LQ + L + +++ GHTD N L RA + Sbjct: 82 FDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER---GTREYNMALGERRAKAV 138 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 L+ +GV+ ++ +S + A + NRR++I Sbjct: 139 QSYLITNGVNPQQLEAVS-YGKEAPVNAGHDESAWKENRRVEI 180 >gi|224369398|ref|YP_002603562.1| ExeA2 [Desulfobacterium autotrophicum HRM2] gi|223692115|gb|ACN15398.1| ExeA2 [Desulfobacterium autotrophicum HRM2] Length = 555 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 65/213 (30%), Gaps = 10/213 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + + + + D+ ++ + + + A Q Sbjct: 347 AGAIDHSIAQPATELDATSITRPVPQPIVQDNDILNFDLASQGEDEPVAHAQTDPSLEQA 406 Query: 195 LAKKISSTLSGLVADNIVKGVLF---ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 ++ V ++ + + ++++ F +++ + + Sbjct: 407 TDLFARTSPEPTVEQFLIPPLSNLSEPGFTPSTQLQPLERKVVVRFGYNNNDFTDQALKD 466 Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L K L +S++G+TDA N +LS RA L+ G D+I Sbjct: 467 LTKFAGSLVAHPGAKVSVKGYTDA---NGNQTYNIKLSEFRANIVKSFLLGRGARLDQIK 523 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 G +D NRR++I V + Sbjct: 524 T-QGMGSENPIATNDTAQGRMMNRRVEIEVISK 555 >gi|110639367|ref|YP_679576.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110282048|gb|ABG60234.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 712 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 9/110 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +SS LPE L K+ + L ++ + GHTD A N RLS RA + Sbjct: 589 FDNNSSKILPEMEGDLDKVVDFLVDHPQIKLVISGHTD---GSGDAAANLRLSQARADAI 645 Query: 296 YQVLMKSG-VSEDRISKISGFAHHRLKIA---SDPMNSANRRIDILVEDR 341 +M+ G + E RI + G+ + + I S+ NRR++ + Sbjct: 646 KSYIMEKGNIDESRIEAV-GYGNQKPIIQQEVSESDRKINRRVEFELIRS 694 >gi|326329962|ref|ZP_08196276.1| outer membrane porin OprF [Nocardioidaceae bacterium Broad-1] gi|325952170|gb|EGD44196.1| outer membrane porin OprF [Nocardioidaceae bacterium Broad-1] Length = 253 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/242 (12%), Positives = 79/242 (32%), Gaps = 10/242 (4%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 ++ + + + ++ ++ + +++ + E + E G + Sbjct: 21 TAVQDTVFRERIEDELTDKAAAALSEAGLDDVEVAFTGRDGEVTAKTEAAAVEAGALVED 80 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + + + + A+ + + S + + Sbjct: 81 VSGVRVVQAFGPDGAVTGEDGSGTDAVGGDSEAEATTEPEPSEPAVTAEASPTPTAEERE 140 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278 L D+ + F+ +S + + + V++ + L + + I GH D Sbjct: 141 AAQAEL----DRFRSIGFEHNSDVLTGDGLGVVKALAATLTEHPDVTVRIEGHAD---IT 193 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + LS RA L+ GV DR+S G+ R + P + NRR++ ++ Sbjct: 194 GMLAHTQDLSERRAKRVLDTLVGLGVEADRLSS-KGYGETRPIVPGKP-DPGNRRVEFVI 251 Query: 339 ED 340 + Sbjct: 252 TN 253 >gi|229526017|ref|ZP_04415421.1| protein F-related protein [Vibrio cholerae bv. albensis VL426] gi|229336175|gb|EEO01193.1| protein F-related protein [Vibrio cholerae bv. albensis VL426] Length = 204 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246 ++ + + +++ + +L + ++ +I NT F+ S+ Sbjct: 49 QKNTSVMPNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 108 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L + LA + + + GHTD + + N +L+ RA + L++S V+ Sbjct: 109 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 165 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++ I GF + + + NRR++I Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197 >gi|222102518|ref|YP_002539557.1| OmpA family protein [Agrobacterium vitis S4] gi|221739119|gb|ACM39852.1| OmpA family protein [Agrobacterium vitis S4] Length = 332 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 8/143 (5%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + L G + + + + F+ S+ E+ L ++ E Sbjct: 192 LLQILEGRAMETGEVTADAQAMSDSLAKTGHIALYGIQFETDSAALKAESDKTLAQMAEF 251 Query: 259 L-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316 L + + I GHTD+ N LS RA + + L G+ DR+ + G Sbjct: 252 LTQDVSRKVYIVGHTDS---SGALERNMNLSQARAAAVVKALTAKFGIDSDRL-QPKGIG 307 Query: 317 HHRLKIA--SDPMNSANRRIDIL 337 + + +D + NRR++++ Sbjct: 308 PYAPAASNANDAGRAKNRRVEMV 330 >gi|21673470|ref|NP_661535.1| peptidoglycan-associated lipoprotein [Chlorobium tepidum TLS] gi|21646575|gb|AAM71877.1| peptidoglycan-associated lipoprotein [Chlorobium tepidum TLS] Length = 170 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 FD SS E L + + + + I GH D N L R Sbjct: 65 GDIFFDFDSSALSSEAQEQLNQNAAWMQKNPTSAVIIEGHCDER---GTDEYNIALGERR 121 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333 A +A L+ GVS R+S +S + + ++ + NRR Sbjct: 122 AEAARMYLVNLGVSGGRLSTVS-YGEEKPFDPGHNEEAWAKNRR 164 >gi|15601417|ref|NP_233048.1| protein F-related protein [Vibrio cholerae O1 biovar eltor str. N16961] gi|153211953|ref|ZP_01947800.1| OmpA family protein [Vibrio cholerae 1587] gi|153800869|ref|ZP_01955455.1| OmpA family protein [Vibrio cholerae MZO-3] gi|153818096|ref|ZP_01970763.1| OmpA family protein [Vibrio cholerae NCTC 8457] gi|153824386|ref|ZP_01977053.1| OmpA family protein [Vibrio cholerae MZO-2] gi|227812226|ref|YP_002812236.1| protein F-related protein [Vibrio cholerae M66-2] gi|254285685|ref|ZP_04960648.1| OmpA family protein [Vibrio cholerae AM-19226] gi|254849820|ref|ZP_05239170.1| OmpA family protein [Vibrio cholerae MO10] gi|298499464|ref|ZP_07009270.1| OmpA family protein [Vibrio cholerae MAK 757] gi|9658075|gb|AAF96560.1| protein F-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|124117029|gb|EAY35849.1| OmpA family protein [Vibrio cholerae 1587] gi|124123579|gb|EAY42322.1| OmpA family protein [Vibrio cholerae MZO-3] gi|126511364|gb|EAZ73958.1| OmpA family protein [Vibrio cholerae NCTC 8457] gi|149741940|gb|EDM55969.1| OmpA family protein [Vibrio cholerae MZO-2] gi|150424182|gb|EDN16120.1| OmpA family protein [Vibrio cholerae AM-19226] gi|227011368|gb|ACP07579.1| protein F-related protein [Vibrio cholerae M66-2] gi|254845525|gb|EET23939.1| OmpA family protein [Vibrio cholerae MO10] gi|297541445|gb|EFH77496.1| OmpA family protein [Vibrio cholerae MAK 757] Length = 207 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246 ++ + + +++ + +L + ++ +I NT F+ S+ Sbjct: 52 QKNTSVMPNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 111 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L + LA + + + GHTD + + N +L+ RA + L++S V+ Sbjct: 112 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 168 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++ I GF + + + NRR++I Sbjct: 169 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 200 >gi|221209716|ref|ZP_03582697.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] gi|221170404|gb|EEE02870.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] Length = 405 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 9/157 (5%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + +RL + L + V ++++ R MF + P Sbjct: 251 REAQRLSPFDALARNLEQRLRDEVAAGNVELIRDPARHVLTL---RFAGMFVPGAMTVAP 307 Query: 247 ETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG 303 V+ G +A E +R G+ D++P + + N +S RA ++L+ +G Sbjct: 308 WGASVVASAGREIASIAEGAVVRVVGYADSAPAGSARQVSNQAISEARAEDVARILVAAG 367 Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 V + ++ G + + NRR++++V Sbjct: 368 VPAHGL-RVEGRGDADALADNGTESGRARNRRVEVIV 403 >gi|332561151|ref|ZP_08415469.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N] gi|332274949|gb|EGJ20265.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N] Length = 254 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 68/207 (32%), Gaps = 7/207 (3%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 S + Q+ K + D + E+ P S E + Sbjct: 49 AARSGNGQARGLKLVTVDRIGPAPAVADVPDSLGAPAGEDPGLRPTASTESAPGETGRPV 108 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L L + + + G+L + F S++ + + Sbjct: 109 L-GLPQGADRLAAADPPPEGRETAEVSPESFGLLDPALQVNVRIHFAFDSAVLAADQTPL 167 Query: 252 LQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRI 309 L ++ V+ S I GHTDA N +LSL RA + L G++ +R+ Sbjct: 168 LAQLCTVMKASDIRLFQIVGHTDA---AGSEAYNQQLSLLRAEEVRRYLTGPCGIAPERL 224 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDI 336 + G L SDP + NRR++ Sbjct: 225 RAV-GMGERFLTNQSDPRSGENRRVEF 250 >gi|325123093|gb|ADY82616.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter calcoaceticus PHEA-2] Length = 186 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS E LQ + L + +++ GHTD N L RA + Sbjct: 78 FDYDSSDLSTEDYQTLQAHAQFLIANANSKVALTGHTDER---GTREYNMALGERRAKAV 134 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 L+ +GV+ ++ +S + A + NRR++I Sbjct: 135 QSYLITNGVNPQQLEAVS-YGKEAPVNAGHDESAWKENRRVEI 176 >gi|238761919|ref|ZP_04622893.1| Outer membrane protein and peptidoglycan-associated (lipo)protein [Yersinia kristensenii ATCC 33638] gi|238700033|gb|EEP92776.1| Outer membrane protein and peptidoglycan-associated (lipo)protein [Yersinia kristensenii ATCC 33638] Length = 169 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +FD + +Q IG L + + + GHTDA N +LS +R Sbjct: 62 NKVLFDSDVRKLNASGVQTVQHIGRALHNVGINHMRVDGHTDAM---GEDGYNQKLSYER 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A + L G+ I ++ G + + NRR+ ++V Sbjct: 119 ASAVADSLAAIGIPRANI-EVHGRGKLEPVADNRTSKGRAENRRVAMIVTAP 169 >gi|332667996|ref|YP_004450784.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332336810|gb|AEE53911.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 542 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 10/109 (9%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRA 292 +F ++ L + E + ++I GHTD A N +LS RA Sbjct: 439 RVLFAFDQAVLNEAARQELAAVAEAAKKANRYTLTIIGHTDD---AGAAEYNQQLSERRA 495 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 + G++ I+ + +D + NRR+++++E Sbjct: 496 KAVADYFAAQGLTAK----IAAKGELVPAVTNDSEGNKAKNRRVEVVLE 540 >gi|308448669|ref|XP_003087717.1| hypothetical protein CRE_26028 [Caenorhabditis remanei] gi|308253504|gb|EFO97456.1| hypothetical protein CRE_26028 [Caenorhabditis remanei] Length = 189 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS + LQ + L + +++ GHTD N L RA + Sbjct: 81 FDYDSSDLSNDDYQTLQAHAQFLIANANSKVALTGHTDER---GTREYNMALGERRAKAV 137 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 L+ +GV +++ +S + + NRR++I Sbjct: 138 ESYLITNGVKANQLEAVS-YGKEMPINTGHDEAAWKENRRVEI 179 >gi|218780334|ref|YP_002431652.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761718|gb|ACL04184.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01] Length = 387 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 5/93 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + PE + ++ K+ +L ++ + ++GH D N LS RA S Sbjct: 285 FDTNKADVKPEYLPLVYKVIPILNNNPGMKIELQGHADNR---GAKDYNQGLSERRAESV 341 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 ++L+ GV R+S G+ + + +D Sbjct: 342 KKILVDKGVDAGRLST-KGWGFTKPIVPNDSEA 373 >gi|156325823|ref|XP_001618597.1| hypothetical protein NEMVEDRAFT_v1g224978 [Nematostella vectensis] gi|156199492|gb|EDO26497.1| predicted protein [Nematostella vectensis] Length = 563 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 46/143 (32%), Gaps = 13/143 (9%) Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISI 268 + V I+ + + +D + P ++ L + + + + I Sbjct: 7 DNDDTVRVTIYMDEIIKIPTFEVHNIYYDYNKDELRPSSVASLDTLVNFMNDNPSLSVEI 66 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--- 325 DA + N LSL RA S L +G+ R++ GF A+ Sbjct: 67 YSFADA---HGNPQYNRDLSLRRAESVMSYLETAGIERSRMTA-KGFGESMPAAANKNPD 122 Query: 326 -----PMNSANRRIDILVEDRQG 343 NRR ++ + G Sbjct: 123 GSDNPAGRQLNRRTELRIISDDG 145 >gi|51244590|ref|YP_064474.1| peptidoglycan-associated lipoprotein precursor [Desulfotalea psychrophila LSv54] gi|50875627|emb|CAG35467.1| related to peptidoglycan-associated lipoprotein precursor [Desulfotalea psychrophila LSv54] Length = 231 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 10/184 (5%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMK-RKKRLQDLAKKISSTLSGLVADNIVKGVL 216 K + N +E Y +P + + ++ L + + T S A+ + Sbjct: 52 SKKVVAPPTGNAQEEYNIPAIPPAQDENQDYGEEDLPPVVGSLDDTDSNAAAEELASKQS 111 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275 + SI Q F ++ PE V+ + +VL + I++ G+TD Sbjct: 112 EAYLQQHGRSSIEFQP--VYFKFDQTMINPEMQEVIFENAQVLKRNPTLYITVEGNTDDR 169 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333 N L RA + + L+ G+ E+RI +S R + + NRR Sbjct: 170 ---GTNEYNMALGEKRAINVEKYLISLGIGENRIRTVS-LGEERPLFPTQTEAAYLYNRR 225 Query: 334 IDIL 337 D + Sbjct: 226 ADFI 229 >gi|312963035|ref|ZP_07777521.1| OmpA/MotB [Pseudomonas fluorescens WH6] gi|311282804|gb|EFQ61399.1| OmpA/MotB [Pseudomonas fluorescens WH6] Length = 163 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +F P + ++Q+IG+ L E + + GHTDA N +LSL R Sbjct: 56 GKVLFGSDVETLNPPSTEIVQRIGKALLGVGIERVRVDGHTDA---SGKEIYNQQLSLRR 112 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 A S VL G+ E + ++ G ++D NRR+ I+V Sbjct: 113 AKSVATVLTGVGMKEQNV-QLRGLGSGEPVASNDTAAGRTENRRVSIVVIAD 163 >gi|296103033|ref|YP_003613179.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057492|gb|ADF62230.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 359 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N +LS Sbjct: 231 KSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRI---GSDAYNQKLS 287 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ ++I G + +A +RR++I Sbjct: 288 EKRAQSVVDYLISKGIPANKI-SPRGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIE 346 Query: 338 VED 340 V+ Sbjct: 347 VKG 349 >gi|83854735|ref|ZP_00948265.1| OmpA family protein [Sulfitobacter sp. NAS-14.1] gi|83842578|gb|EAP81745.1| OmpA family protein [Sulfitobacter sp. NAS-14.1] Length = 176 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 22/174 (12%) Query: 178 LSKEKILAMKRKKRLQDLAKKISST-----------LSGLVADNIVKGVLFETTRTGILI 226 L A R ++ +D + I + + + V + Sbjct: 8 LQASAADAQTRSQQGRDKGQYIPTIWVDPDGCEHWVMDDGAEGYMTPHVTRQGIPVCRRG 67 Query: 227 SIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 ++ N F+ S P+ L + + + I GHTD+ N Sbjct: 68 NVCGVMNTDQFFNTDSYRVHPQGRARLAEFFKTTGAVS--YIISGHTDSR---ASDAYNM 122 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 +LSL+RA + + +SG RI+ + G+ ++ + NRR++I+ Sbjct: 123 KLSLNRANAVASIAQQSG---ARIADVRGYGERMPAASNGTAGGMAKNRRVEII 173 >gi|330448107|ref|ZP_08311755.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492298|dbj|GAA06252.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 348 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 7/128 (5%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGH 271 V + I+I + + + + E LQ + + L + + G+ Sbjct: 201 PVVNTAPPQEAKTITIEPATVSIAYGVNGNHLTAEDQQKLQPMMQRLTRYPSATVEVTGY 260 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 T + A N +LS RA + +L + + ++I+ G ++D Sbjct: 261 TSNT---GSAAYNQKLSEKRAKNVAHLLSQYVANPNQITA-KGMGEATPVASNDTAEGRA 316 Query: 331 -NRRIDIL 337 NRR+++ Sbjct: 317 ANRRVEVY 324 >gi|323945384|gb|EGB41438.1| OmpA family protein [Escherichia coli H120] Length = 148 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 55/94 (58%) Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 +L ++ V I I GHTDA ++N +NW LS DRA SA +VL ++G+ ED Sbjct: 19 FKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPED 78 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ ++S A L A +P ++ NRRI+I+V + Sbjct: 79 KVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTK 112 >gi|254512183|ref|ZP_05124250.1| peptidoglycan-associated lipoprotein [Rhodobacteraceae bacterium KLH11] gi|221535894|gb|EEE38882.1| peptidoglycan-associated lipoprotein [Rhodobacteraceae bacterium KLH11] Length = 169 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + +F + S P+ VLQ + L + + + +I GH D N L R Sbjct: 59 DRVLFAVNQSTLSPQAQTVLQGQADWLLANPDFVATIEGHADEQ---GTREYNLALGARR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 A +A + L+ GV+ +R++ +S + R S NRR ++ Sbjct: 116 ANAAREYLISRGVAGNRLTTVS-YGKERPIEICSTEECYSKNRRAVTVLTGS 166 >gi|170736605|ref|YP_001777865.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169818793|gb|ACA93375.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3] Length = 234 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ + L + ++I G TD++ A N LS RA + Sbjct: 131 FATDSAALTSQARNDLDRFIAANRGVEFARVAITGFTDST---GSAAHNRTLSEARARTV 187 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 L +G+ R G ++ + NRR++I ++ + Sbjct: 188 VNYLRSNGLQA-RSFSAEGLGAADPVASNATADGRAQNRRVEIRLDVK 234 >gi|118588324|ref|ZP_01545733.1| omp16 protein [Stappia aggregata IAM 12614] gi|118439030|gb|EAV45662.1| omp16 protein [Stappia aggregata IAM 12614] Length = 161 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 11/137 (8%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 ++ + D + V T + ++ + F++ S+ + L + L Sbjct: 23 AAACAQTKPDGLSSNVKPGTGQDFVVNV----GDRVFFEEDQSVLNAQGQATLANQAKWL 78 Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ ++ GH D + N L RA SA L+ GV+ RI IS + Sbjct: 79 NRYSQYTITVEGHADER---GTRQYNIALGARRAQSARDYLVAQGVNASRIKTIS-YGKE 134 Query: 319 RLKI--ASDPMNSANRR 333 R + S NRR Sbjct: 135 RPVAVCNDNSCWSQNRR 151 >gi|2499351|sp|Q99124|OMPA_ESCBL RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II gi|146989|gb|AAA24235.1| outer membrane protein II [Escherichia blattae] Length = 241 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G+TD N RLS Sbjct: 122 KSDVLFNFNKSTLKPEGQQALDQLYTQLSNLDPKDGAVVVLGYTDRI---GSDAYNQRLS 178 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +I+ G + +A +RR++I Sbjct: 179 QQRAQSVVDYLVSKGIPAGKITA-QGQGESNPVTGNTCDNVKKRAALIDCLAPDRRVEIE 237 Query: 338 VED 340 V+ Sbjct: 238 VKG 240 >gi|228018099|gb|ACP52728.1| fibronectin-binding protein [Campylobacter coli] Length = 224 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD P +++I ++L + +I GHTD N +LS RA S Sbjct: 136 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 192 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 + L K GV + RI + G+ + + ++D Sbjct: 193 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 224 >gi|71065468|ref|YP_264195.1| OmpA/MotB family outer membrane protein [Psychrobacter arcticus 273-4] gi|71038453|gb|AAZ18761.1| outer membrane protein, OmpA/MotB family [Psychrobacter arcticus 273-4] Length = 172 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 7/105 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 F SS ++ VL + ++L + + GHTD N L RA Sbjct: 70 VYFAFDSSEITSQSAGVLNQHADLLKSNPSAGVVIAGHTDER---GSREYNIALGERRAQ 126 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 +A L GV+ + I ++ + R ++ + NRR ++ Sbjct: 127 AARDYLAAQGVAANNI-RVISYGEERPAAAGTNEDAYAQNRRAEL 170 >gi|46447485|ref|YP_008850.1| peptidoglycan-associated lipoprotein precursor (pal) [Candidatus Protochlamydia amoebophila UWE25] gi|46401126|emb|CAF24575.1| probable peptidoglycan-associated lipoprotein precursor (pal) [Candidatus Protochlamydia amoebophila UWE25] Length = 246 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 66/227 (29%), Gaps = 14/227 (6%) Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178 K R N + + + D E D + PL Sbjct: 30 EDTKSAGRHMNRGVRALGGKHGDSRQVHSKNDFECVDDEYSHQEGGFQDCDYSRADFIPL 89 Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + L ++ + + ++ + T FD Sbjct: 90 QDQANNEFAMADILARQPRETPGEIGSSIPSIES------FQDPCMIPQLAAIFKTIYFD 143 Query: 239 KSSSIPLPETI-VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 SS+ + + +I + + I I GHTD N L R+ + Sbjct: 144 YDSSMIKGQANLQTIHQIADFMRRHPNVYIFIEGHTDER---GPQAYNLALGSRRSNAVR 200 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341 +L+ V+ D + IS + R + + S NRR++ + +R Sbjct: 201 NLLISEDVNPDNLFTIS-YGKERPVVLEKHEEGWSRNRRVEFKIYER 246 >gi|320531900|ref|ZP_08032811.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320135891|gb|EFW27928.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 332 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLD 290 F S + VL + E + ++I GHTD N LS Sbjct: 46 GDVTFATDSDQLSAQADSVLASVVEQIKKYPSGGDLTITGHTDDV---ADDAHNQDLSER 102 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA + + L K +SG ++ +D NRR++I + + Sbjct: 103 RAKAVSERLKKLTDLSTWKESVSGKGESSPRVPNDTDERRQINRRVEITLTPSK 156 >gi|293609865|ref|ZP_06692167.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828317|gb|EFF86680.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 188 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS E LQ + L + +++ GHTD N L RA + Sbjct: 80 FDYDSSDLSTEDYQTLQAHAQFLIANANSKVALTGHTDER---GTREYNMALGERRAKAV 136 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 L+ +GV+ ++ +S + A + NRR++I Sbjct: 137 QSYLITNGVNPQQLEAVS-YGKEAPVNAGHDESAWKENRRVEI 178 >gi|146338272|ref|YP_001203320.1| Outer membrane lipoprotein omp16 [Bradyrhizobium sp. ORS278] gi|146191078|emb|CAL75083.1| Outer membrane lipoprotein omp16 precursor (peptidoglycan-associated lipoprotein) [Bradyrhizobium sp. ORS278] Length = 149 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + P+ I L+K + L +I GH D N L R Sbjct: 41 DRVFFESDQTDLTPQAIATLEKQAQWLQSYPRYSFTIEGHADER---GTREYNIALGARR 97 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A S L+ G+ + R+ IS + R +D S NRR Sbjct: 98 AQSVRNFLVSRGIDQSRMRTIS-YGKERPVAVCNDISCWSQNRR 140 >gi|332300760|ref|YP_004442681.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] gi|332177823|gb|AEE13513.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] Length = 296 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 7/113 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285 I N F + + ET VL + +++ + + + I GHT N Sbjct: 188 EIEKNFNAAKFVQGKADLTDETKFVLHDLAKLMEANPDLKLKIEGHTSEE---GDEAFNQ 244 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 RLS +RA A L+ G+S DR+ G ++P NRR + +V Sbjct: 245 RLSEERAQVAVDFLISQGISADRLQA-EGKGSSEPIDPNNPE--VNRRTEFIV 294 >gi|325269448|ref|ZP_08136065.1| immunogenic lipoprotein PG3 [Prevotella multiformis DSM 16608] gi|324988369|gb|EGC20335.1| immunogenic lipoprotein PG3 [Prevotella multiformis DSM 16608] Length = 225 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 8/144 (5%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K++ + + + V V + ++ + +F + S L K Sbjct: 74 MDKVAREAAQALPNARVDKVTDANGLQCVKVTF---DSGILFPLNGSNLNVSAKNDLTKF 130 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++ ++ I+G+TDA N LS RA S L GV+ +I + G Sbjct: 131 AGLMKRNSNCDVAIQGYTDA---SGNDNINIPLSQRRAESVSSYLKGQGVTGRQIRSVQG 187 Query: 315 FAHHRLKIASDPMNSANRRIDILV 338 F + ++ ANRR+++ + Sbjct: 188 FGSANPI-ENKTVSQANRRVEVYL 210 >gi|323491818|ref|ZP_08096993.1| OmpA family protein [Vibrio brasiliensis LMG 20546] gi|323313953|gb|EGA67042.1| OmpA family protein [Vibrio brasiliensis LMG 20546] Length = 188 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 10/119 (8%) Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNI 280 +++ + D F+ SS P++ L +G LA + + GH D++ Sbjct: 71 NHVMVRLKDTIK---FNTGSSRVAPDSKYWLDMMGNYLATQPSIDIVIDGHADST---GA 124 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 N LS+ RA + Q L+ + V+ D I G+ + ++ NRR+++L Sbjct: 125 PSFNDSLSMKRAKAVKQQLVNNRVAMDSIYT-RGYGEYVPACSNRTKAGKACNRRVEVL 182 >gi|294636572|ref|ZP_06714935.1| OmpA family protein [Edwardsiella tarda ATCC 23685] gi|291090190|gb|EFE22751.1| OmpA family protein [Edwardsiella tarda ATCC 23685] Length = 162 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F + + PE+ + +IG L+ + G+TD N +LSL R Sbjct: 55 EKVLFGNNQFVLRPESQAHVAEIGRALSKVAILHARLDGYTDNY---GTDAYNQQLSLKR 111 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A L G+ ++ G + + NRR+ I+++ Sbjct: 112 ADKVADALASGGMPRANLTT-RGMGKRDPIADNATRQGRAENRRVAIIIQAP 162 >gi|149370425|ref|ZP_01890114.1| putative flagellar motor protein MotB [unidentified eubacterium SCB49] gi|149355976|gb|EDM44533.1| putative flagellar motor protein MotB [unidentified eubacterium SCB49] Length = 286 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 86/248 (34%), Gaps = 7/248 (2%) Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 + L T +++ + + + + ++ + + Sbjct: 26 VTLQGQYDETVSTLSKTQLENERLETRLTDIDEKVDSYYKRIQSLSDSNSSLEQLSNSRY 85 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 K ++ S N + + + K + IS L ++ ++ Sbjct: 86 QKMGNVVVSENDKIKMKKALADVDPVKLKNAKTLQDSMNLIISHNLKKGLSSEMMTDNDD 145 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 + +I + +F+ S + +L+K+ ++ + + GHTD+ Sbjct: 146 IDISIDETVVMITISDKMLFNSGSYRINAKANPLLEKLAALINSEPALEVMVEGHTDSQT 205 Query: 277 FRNIA--RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSAN 331 + A +DNW LS++R+ + + L V+ +++ G + + +D S N Sbjct: 206 VKPGAIVKDNWDLSVERSTAVIRKLQDQYNVAPEKLIAA-GRSSYHPVTENDTKDGRSKN 264 Query: 332 RRIDILVE 339 RR I++ Sbjct: 265 RRTRIVIL 272 >gi|89055525|ref|YP_510976.1| OmpA/MotB [Jannaschia sp. CCS1] gi|88865074|gb|ABD55951.1| OmpA/MotB [Jannaschia sp. CCS1] Length = 487 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 8/147 (5%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I + ++ L + V +L+ + N F S+ + I V +IG+ Sbjct: 320 PIDTFIAFLQPEVDDGLVRLYREGDAVLVRV---ANAGAFGSGSAEIEDDFIDVFDRIGQ 376 Query: 258 VLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 LA +++ GHTD R +N+ LS RA + VL++ V R+ I G Sbjct: 377 ALAAEDFAVTVLGHTDNVAIRTAPFPNNYFLSRARANAVRDVLLQY-VDPVRVD-IEGQG 434 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDR 341 R ++ NRR +ILV + Sbjct: 435 PDRPIASNITPAGQEANRRTEILVREP 461 >gi|85375559|ref|YP_459621.1| outer membrane protein [Erythrobacter litoralis HTCC2594] gi|84788642|gb|ABC64824.1| outer membrane protein [Erythrobacter litoralis HTCC2594] Length = 197 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 13/129 (10%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIAR 282 +LI + T F S + PE + L+ + E I+I GH+DA Sbjct: 54 VLIPLEPLNTTISFADSGTDLTPEAVAELETLVESRQVTEGGPITIGGHSDA---GGNDA 110 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--------ASDPMNSANRRI 334 N R+SL RA + L+ GV E RI + F ++ +ANRR+ Sbjct: 111 VNMRVSLRRAEAVRDWLVARGVDEGRI-TVIAFGEQNPVEPNALPDGQPNEDGRAANRRV 169 Query: 335 DILVEDRQG 343 +I V+ +G Sbjct: 170 EIRVDVPEG 178 >gi|283856455|ref|YP_163089.2| OmpA/MotB domain-containing protein [Zymomonas mobilis subsp. mobilis ZM4] gi|283775459|gb|AAV89978.2| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 366 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 7/106 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD PE +L + A + + + + G+TD A+ N LS RA Sbjct: 258 VFFDFDKYNITPEAASILDNVASSYAQTGQARVVVAGYTDT---AGPAKYNMGLSQRRAD 314 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 S L+ GV +D + + L + + NRR++I Sbjct: 315 SVKAYLVGKGVPDDAM-ATEAYGKTHLLVQTADGVREPQNRRVEIT 359 >gi|194291785|ref|YP_002007692.1| outer membrane protein; ompa/motb domain [Cupriavidus taiwanensis LMG 19424] gi|193225689|emb|CAQ71635.1| putative outer membrane protein; OmpA/MotB domain [Cupriavidus taiwanensis LMG 19424] Length = 272 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 34/250 (13%), Positives = 67/250 (26%), Gaps = 8/250 (3%) Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 + + G+ + + + L S Sbjct: 24 AAPGDPGTTATPAASAAAPSGRVVAGGAVPDEATKASVLARLRELYGSANVVDQIEVGNV 83 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 S L I + L + + + Q + Sbjct: 84 VSPPNWSGNVQKILSPQIKQVSRGQLSIDGTQVSVHGDVRNEAQRQQIASDMATGLGQSY 143 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SI 268 + G+ + +L + R F+ ++ P+ +L ++ VL + I Sbjct: 144 TVKNGLRVPASEQNLLDQTLANRIIE-FETGAATLTPKGRAILDEMAAVLPRLSGRKIEI 202 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--P 326 GHTD N LS RA + L+ G ++ + G + +D Sbjct: 203 VGHTDN---SGSRALNLTLSQARAETVKNYLIGKGGEPGMLTAV-GVGPDQPVAPNDKEE 258 Query: 327 MNSANRRIDI 336 + NRRI+ Sbjct: 259 GRAKNRRIEF 268 >gi|307294752|ref|ZP_07574594.1| peptidoglycan-associated lipoprotein [Sphingobium chlorophenolicum L-1] gi|306879226|gb|EFN10444.1| peptidoglycan-associated lipoprotein [Sphingobium chlorophenolicum L-1] Length = 169 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 8/113 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + +FD + +LQ L + ++I GH D N L Sbjct: 60 SSDRILFDTDQYDVDAQDQQILQSQAAWLQQNPNVRVTIEGHADER---GTRDYNIALGE 116 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILVE 339 RA +A L G+ RI+ +S + R + + + NRR + + V+ Sbjct: 117 RRANAAKNYLASLGIDAGRITTVS-YGKERPAALGSDEAAWAQNRRAVTVTVQ 168 >gi|238786643|ref|ZP_04630444.1| Outer membrane protein and peptidoglycan-associated (lipo)protein [Yersinia frederiksenii ATCC 33641] gi|238725011|gb|EEQ16650.1| Outer membrane protein and peptidoglycan-associated (lipo)protein [Yersinia frederiksenii ATCC 33641] Length = 168 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +FD +Q IG+ L + + + GHTDA+ N +LS +R Sbjct: 61 NKVLFDSDVRKLNSSGTQTVQNIGQALHNVGINHLRVDGHTDAT---GEDSYNQKLSYER 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 A + L G+ I + G + + NRR+ ++V Sbjct: 118 AAAVADSLATIGIPRTNID-VRGRGKLEPVADNRSAKGRAENRRVAMIVT 166 >gi|187925345|ref|YP_001896987.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] gi|187716539|gb|ACD17763.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 266 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + F S+ L + V +++ G+TD + + N +LS Sbjct: 158 QGNANFATDSAALSSVAKENLDRFMNVNQGVNLHRVTVTGYTDKT---GLEAHNLKLSQA 214 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + Q L G+ D+ G + NRR+D+ V Sbjct: 215 RAAAVMQYLRDGGLHADQFVA-RGLGSADPVAPNATAEGRTQNRRVDVRV 263 >gi|331004882|ref|ZP_08328299.1| OmpA/MotB [gamma proteobacterium IMCC1989] gi|330421336|gb|EGG95585.1| OmpA/MotB [gamma proteobacterium IMCC1989] Length = 232 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 17/158 (10%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGI---LISIIDQR----NTPMFDKSSSIPLP 246 +L++ + + + + L + + +++ D R +F +SS Sbjct: 41 ELSQNLEEETAKRKMEEQRRMALEQALSDPLATGRVTLRDGRIGISGNVLFANNSSTLQE 100 Query: 247 ETIVVLQKIGEVLA----HSTEVISIRGHTDASPFRNI---ARDNWRLSLDRAYSAYQVL 299 +L + L +++ + G TD P + DNW LS RA + + L Sbjct: 101 NGRELLNTLVAPLKIYLSEREQLLMVSGFTDDKPIQTGNLNFSDNWDLSAQRALTVTRAL 160 Query: 300 MKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRID 335 ++ G+ + + F + + + + NRR++ Sbjct: 161 IEEGMPSSMVFAAA-FGAQQPVVPNTDRASRAKNRRVE 197 >gi|262195655|ref|YP_003266864.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262079002|gb|ACY14971.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 507 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 8/109 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLD 290 + +F ++ L+++ L E I GH N RLS Sbjct: 374 SNVLFGYDKCALSEQSHDSLREVAMTLQQHPEWGQIRIEGHASQE---GKPEYNLRLSSC 430 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L+ +GV+ +R+ + GF K ++ NRR++ + Sbjct: 431 RAMAVRKFLIANGVAAERLQSL-GFGDTCPKFSTGTPEEMQQNRRVEFI 478 >gi|163869125|ref|YP_001610364.1| peptidoglycan-associated lipoprotein [Bartonella tribocorum CIP 105476] gi|161018811|emb|CAK02369.1| peptidoglycan-associated lipoprotein [Bartonella tribocorum CIP 105476] Length = 172 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F SS + +L + E L H I I GH D N L R Sbjct: 62 DRVFFSLDSSSLDADAERILTRQAEWLLHYPYYSIMIEGHADER---GTREYNLALGQRR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + L+ GVS RI IS + R + NRR Sbjct: 119 AVAVRNYLVSLGVSAQRIQTIS-YGKERPVAVCDDISCWNQNRR 161 >gi|163800823|ref|ZP_02194723.1| putative outer membrane protein [Vibrio sp. AND4] gi|159175172|gb|EDP59969.1| putative outer membrane protein [Vibrio sp. AND4] Length = 212 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 7/113 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 +F SS P + ++ + L I ++G+T N LS RA Sbjct: 85 RILFANDSSRIDPVFAGQISELSDFLKEYPTTSIELKGYTS---ITGTNEYNLALSKRRA 141 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 S Q L+ +G++ +R+ +I GF + + + NRR+ V +G Sbjct: 142 ESVRQELVNNGIAPERL-EIVGFGENNPASQGTDETSQALNRRVTASVIGYKG 193 >gi|126733574|ref|ZP_01749321.1| OmpA family protein [Roseobacter sp. CCS2] gi|126716440|gb|EBA13304.1| OmpA family protein [Roseobacter sp. CCS2] Length = 216 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S++ + L + + + E + GHTD N L L RA +A Sbjct: 77 FAFNSTVLDADARSTLMRQADWIRQFPEVRFKVYGHTD---LVGSQGYNRSLGLRRAQAA 133 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L G++ +R+ + F + + +D NRR Sbjct: 134 VAFLASQGINRNRLEAVVSFGETQPLVVTDGRERRNRR 171 >gi|126725522|ref|ZP_01741364.1| OmpA/MotB [Rhodobacterales bacterium HTCC2150] gi|126704726|gb|EBA03817.1| OmpA/MotB [Rhodobacterales bacterium HTCC2150] Length = 170 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +FD S +L + L + ++ + GH D N L R Sbjct: 60 DRVLFDVDQSTLNDAGRTLLSQQAAWLNSNPAYMVLVEGHADEQ---GTRAYNLALGDRR 116 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILV 338 A +A L+ GV R+S ++ F R + + S NRR I++ Sbjct: 117 ATAARAYLVSQGVDASRLSTVT-FGKERPLEICSQEACYSQNRRAVIIL 164 >gi|84516634|ref|ZP_01003993.1| OmpA family protein [Loktanella vestfoldensis SKA53] gi|84509670|gb|EAQ06128.1| OmpA family protein [Loktanella vestfoldensis SKA53] Length = 218 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+I L++ + + E + GHTD A N L L RA + Sbjct: 75 FEFDSAILDSLAQATLRQQADWIRQFPEVRFKVFGHTD---LVGSAEYNRNLGLRRAQAV 131 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L G+S DR+ + F + I + NRR Sbjct: 132 VGYLSTQGISRDRLEAVVSFGATQPLIPTPEPERRNRR 169 >gi|298291414|ref|YP_003693353.1| OmpA/MotB domain protein [Starkeya novella DSM 506] gi|296927925|gb|ADH88734.1| OmpA/MotB domain protein [Starkeya novella DSM 506] Length = 202 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 13/150 (8%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 Q L + ++ V ++ K + I++ Q F S I PE+ Sbjct: 57 AQLLRQMAEQAVANNVPLDLNKSAVAAQLFKLAQITVQIQ-----FALGSDIIRPESYAT 111 Query: 252 LQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSED 307 + I + L H I G+TD + +N +LS RA + Q L+ GV Sbjct: 112 IGAISDALHHPILFNYHFLIVGNTDTT---GTRANNLKLSQARADAVKQALVTVFGVDPA 168 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDIL 337 R+ + G L+ +DP N NRR+ + Sbjct: 169 RLEAV-GLGQEDLQTPNDPTNPINRRVQLF 197 >gi|34497346|ref|NP_901561.1| outer membrane protein [Chromobacterium violaceum ATCC 12472] gi|34103202|gb|AAQ59565.1| probable outer membrane protein [Chromobacterium violaceum ATCC 12472] Length = 223 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 11/146 (7%) Query: 197 KKISSTLSGLVADNIVKGVLFETT-RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + G+ T + I+I FD +S P VL K+ Sbjct: 78 QHMQKQKEAMEQATKGTGIGVSQTADNRLKINIPSD---ASFDTNSYALKPSLKPVLDKL 134 Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + ++I GHTD + N LS++RA + L GV +RI I G Sbjct: 135 ATTLQQNPVTSVNIIGHTDNT---GSDAINNPLSVNRAKATQGYLASRGVDINRIG-IDG 190 Query: 315 FAHHRLKIASDP--MNSANRRIDILV 338 + + NRR++I V Sbjct: 191 RGSREPVADNGTVSGRAMNRRVEIYV 216 >gi|269966185|ref|ZP_06180275.1| putative protein F-related protein [Vibrio alginolyticus 40B] gi|269829332|gb|EEZ83576.1| putative protein F-related protein [Vibrio alginolyticus 40B] Length = 224 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 10/123 (8%) Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIA 281 ++I + + + F S+ ++ ++ IG LA T+V + GH D++ Sbjct: 109 HLMIRLKEHVH---FQTGSARLSAQSQDWIRNIGHYLAGRTDVDVVIDGHADST---GAE 162 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 N LS RA + L+ + + R+ GF + K ++ + NRR+++ + Sbjct: 163 SFNDTLSEKRAREVEKQLLATSIPRQRVFS-RGFGEYVPKCSNATASGKACNRRVELTLI 221 Query: 340 DRQ 342 + Sbjct: 222 VDE 224 >gi|163786795|ref|ZP_02181243.1| hypothetical protein FBALC1_16457 [Flavobacteriales bacterium ALC-1] gi|159878655|gb|EDP72711.1| hypothetical protein FBALC1_16457 [Flavobacteriales bacterium ALC-1] Length = 637 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 92/268 (34%), Gaps = 14/268 (5%) Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 D + P R+ ++ + D+ + + G + ++ + ++++ + Q Sbjct: 367 IDGKIAPIRNVGIPVNSNADDFAFSIDEETEEGFVSSNREGGKGSDDVYAIKKLQPLCDV 426 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM----KRKKRLQDLAKKI 199 S T +K ++ + + + E + + L+ + Sbjct: 427 LVSATVLDDKTREPISGASVSLYDAEGNKVVSKTTNAEGVAEFIIECEEDTELEVVMDGF 486 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRN--TPMFDKSSSIPLPETIVVLQKIGE 257 S + + + + + + + D+ F+ S + L K+ + Sbjct: 487 DSKRVPVKGSSEEENNVQISLDPIEKLIVADKIELAPIYFEYDKSNVTAQAAFELDKLVQ 546 Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 ++ + + T + + A N RLS RA + Q ++ G+ E RIS + G Sbjct: 547 IMNKYPD--LVINATSHTDYIGSAPYNMRLSDRRAKTTVQYVISKGIDESRISGV-GKGE 603 Query: 318 HRLKIA-----SDPMNSANRRIDILVED 340 KI +D NRR + ++ Sbjct: 604 TEPKIDCGTKCTDEERQMNRRSEFIIVS 631 >gi|119383439|ref|YP_914495.1| OmpA domain-containing protein [Paracoccus denitrificans PD1222] gi|119373206|gb|ABL68799.1| OmpA domain protein [Paracoccus denitrificans PD1222] Length = 173 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 +T +F S PE V+L L + ++ GH D N L R Sbjct: 63 DTVLFPLDQSTLTPEARVILANQAGWLNQNAGFAAVIEGHADEQ---GTREYNLALGARR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343 A S + L+ G++ R+ +S + R + NRR +V G Sbjct: 120 ANSVQEYLISQGIAPGRLRTVS-YGKERPLAICSTEECFTKNRRAVTVVSPGAG 172 >gi|332297510|ref|YP_004439432.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168] gi|332180613|gb|AEE16301.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168] Length = 469 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 14/170 (8%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 L + +++ D + ++ V +N V V TGI ISI + + F Sbjct: 287 LDEAQLVRAVGAPLKDDAYYVVMRDVAQFVYENKVPDVTITDDYTGIQISIQNLQ----F 342 Query: 238 DKSSSIPLPETIVVLQKIGEVLA----HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 S+ LP + L I E+L + + + GHT + +LS++RA Sbjct: 343 IADSAELLPAEKLRLDTIAELLKTVTADNEFSVIVEGHTASV---GKPAGEQQLSIERAQ 399 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + + + GV + GF + + NRR++IL+ + Sbjct: 400 AIISAMAQRGVDTGTFTS-KGFGGTVPVGDNATPEGRAQNRRVEILIVPK 448 >gi|124005444|ref|ZP_01690285.1| OmpA family protein [Microscilla marina ATCC 23134] gi|123989266|gb|EAY28844.1| OmpA family protein [Microscilla marina ATCC 23134] Length = 300 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 85/286 (29%), Gaps = 8/286 (2%) Query: 59 DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118 + +K + Q + S+ + E R + ++ ++ + Sbjct: 17 KNQRKGLSQSELKEIALDLGMSEAEWREVQNVARGHIERGYNFLEHQNEDDAQKEFEQAL 76 Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178 + ++ + K + + K TD + +L Sbjct: 77 LVFPDDAPALYGVAHIHERRFMAKGKAADKETALKYAHAALQTDPAHTEAARLISYLKDQ 136 Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 RK L + + + I + + F+ Sbjct: 137 KPITTWHKVRKPVFLLLVLAVLAGVVYKYQGKIKTEIDHIKEAFQARKGAQFVLHEVYFE 196 Query: 239 KSSSIP-LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 S+ + L ++ L + I GHTD + A N ++S RAYS Y Sbjct: 197 SGSTELHDARSEEELMRLVSFLKKHPKLKGEIAGHTDNT---GRAAANLQISTQRAYSVY 253 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 + L K+GV ++ G+ R K ++ NRRI+ + Sbjct: 254 KYLTKNGVKPAQLI-YRGYGATRPKFPNNNPVNRRKNRRIEFKILK 298 >gi|86132374|ref|ZP_01050968.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85816935|gb|EAQ38119.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 650 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 12/114 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 N FD P+ + L+K+ V+ + I +R HTD+ N LS R Sbjct: 538 NPIYFDFDRFNIRPDAALELEKVLAVMREYPNMVIDVRSHTDSR---GNDSYNLSLSDKR 594 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--AS-----DPMNSANRRIDILV 338 A S ++ G+S RI G+ +L ++ + + NRR + +V Sbjct: 595 AKSTVNYIIAEGISSSRI-SGRGYGETQLTNECSNGVQCSEEAHQLNRRSEFIV 647 >gi|86130800|ref|ZP_01049399.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85818211|gb|EAQ39371.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 632 Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 79/277 (28%), Gaps = 10/277 (3%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 + + QN + D SI + ++ + K Sbjct: 360 DVFMSESKGANTYAIPQNAGTGINSPADDFSIYINQDTDTGFISSNRAGGKGGDDIYILG 419 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + N +K + +T S + L + K Sbjct: 420 QLPPCDVDVALTVVNPAGEGIDKALVIVNNTTDNTSESDTATTTGKYLYQSKCNRTYTIT 479 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 D K+ + ++ + L ++ N FD S P Sbjct: 480 ASADGYKEANQNITVGKSGMSQTITLEPIIDQVVVTETEVVLNPIYFDFDKSNIRPSAAA 539 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L ++ V+ + IS HTD R N LS RA S ++ G++ RI Sbjct: 540 ELDRLVNVMKQYPTMVISAESHTD---IRGSESYNKNLSQRRADSMRDYVVSKGINASRI 596 Query: 310 SKISGFAHHRLKIA-----SDPMNSANRRIDILVEDR 341 S I G IA ++ + NRR + R Sbjct: 597 SSI-GKGESEPAIACGTNCTEDEHQLNRRSVFKIVTR 632 >gi|241761684|ref|ZP_04759771.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373992|gb|EER63525.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 363 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 7/106 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD PE +L + A + + + + G+TD A+ N LS RA Sbjct: 255 VFFDFDKYNITPEAASILDNVASSYAQTGQARVVVAGYTDT---AGPAKYNMGLSQRRAD 311 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 S L+ GV +D + + L + + NRR++I Sbjct: 312 SVKAYLVGKGVPDDAM-ATEAYGKTHLLVQTADGVREPQNRRVEIT 356 >gi|307720703|ref|YP_003891843.1| OmpA/MotB domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306978796|gb|ADN08831.1| OmpA/MotB domain protein [Sulfurimonas autotrophica DSM 16294] Length = 180 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 57/162 (35%), Gaps = 10/162 (6%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI--LISIIDQRNTPMFDKSS 241 +K+ +++A + + + + + + T + +I + T FD Sbjct: 22 KEPAVQKKTEEVASPVVQEVEAVTTETVASENSTINSSTNELSMNAIESKLPTIYFDFDK 81 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 PE + E+ + S+ G+ D N+ L L RA + + L Sbjct: 82 YNIKPEMQERIDAAAELGKTGAKAFSVKLEGNCDEW---GSDEYNFALGLKRANAVKKAL 138 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 + G+ RIS +S + + NRR++ + Sbjct: 139 VADGIDPSRISMVS-YGESNPVCTEHTRACWAKNRRVNFKLL 179 >gi|260752248|ref|YP_003225141.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551611|gb|ACV74557.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 366 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 7/106 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD PE +L + + + + + + G+TD A+ N LS RA Sbjct: 258 VFFDFDKYNITPEAASILDNVASSYSQTGQARVVVAGYTDT---AGPAKYNMGLSQRRAD 314 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 S L+ GV +D + + L + + NRR++I Sbjct: 315 SVKAYLVGKGVPDDAM-ATEAYGKTHLLVQTADGVREPQNRRVEIT 359 >gi|227873541|ref|ZP_03991786.1| conserved hypothetical protein [Oribacterium sinus F0268] gi|227840631|gb|EEJ51016.1| conserved hypothetical protein [Oribacterium sinus F0268] Length = 385 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 69/202 (34%), Gaps = 16/202 (7%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 S+ + G + + ++ + +L +I+ L+ Sbjct: 47 RSIFPNGRPGDKSAEQIIINGQATNKDEPAGEIGDSGAPENTVDPNNINELYLQIAQALN 106 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 G D V + + D+ F SS+ P+ L + +A Sbjct: 107 GAGIDG----VEVSRGQDYTFVVFKDK---AFFAGDSSVITPQGQETLSIFCDTIAPDAN 159 Query: 265 ---VISIRGHT-DASPFRNIARDNWR-LSLDRAYSAYQVLMKSGV-SEDRISKISGFAHH 318 +++ GHT A P R N R LS+ RA + G+ S D++ I G+ Sbjct: 160 KLSQVNVMGHTAQADPERANNPRNDRILSVMRAAEVCLFIQGRGIISPDKLVSI-GYGQF 218 Query: 319 RLKIASDP--MNSANRRIDILV 338 + + NRR++IL+ Sbjct: 219 HPIADNATSEGRAKNRRVEILL 240 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 57/192 (29%), Gaps = 11/192 (5%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP---------- 71 + GSW Y D +T+LM FF++++ +++ D + P Sbjct: 2 KKRGGGDEGGSWMDTYGDLVTLLMTFFVLLYSMSSIDSAKWDVFVRSIFPNGRPGDKSAE 61 Query: 72 -FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 N +K + + +N +D + + G+ + R ++ Sbjct: 62 QIIINGQATNKDEPAGEIGDSGAPENTVDPNNINELYLQIAQALNGAGIDGVEVSRGQDY 121 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 F + + +S+ + + NK + + + Sbjct: 122 TFVVFKDKAFFAGDSSVITPQGQETLSIFCDTIAPDANKLSQVNVMGHTAQADPERANNP 181 Query: 191 RLQDLAKKISST 202 R + + + Sbjct: 182 RNDRILSVMRAA 193 >gi|254510529|ref|ZP_05122596.1| OmpA family protein [Rhodobacteraceae bacterium KLH11] gi|221534240|gb|EEE37228.1| OmpA family protein [Rhodobacteraceae bacterium KLH11] Length = 208 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ +L + + + E + GHTDA + N RL RA +A Sbjct: 65 FAFDSAQLDASAQRILLQQADWIKQFPEVRFRVYGHTDAV---GTSAYNKRLGQRRANAA 121 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L + G+S R+ + F R +A+ + NRR Sbjct: 122 VAFLTQQGISRSRLEAVVSFGKSRPLVATPDRDRRNRR 159 >gi|113461178|ref|YP_719247.1| hemagglutinin antigen [Haemophilus somnus 129PT] gi|112823221|gb|ABI25310.1| hemagglutinin antigen [Haemophilus somnus 129PT] Length = 355 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 16/137 (11%) Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 ++ + + F + PE L + +A +S+ G+TD Sbjct: 223 PVMAPEVVNKVFSLNSDVNFAFAKDTLKPEAQQTLDGVYGEIAQLKTAQVSVAGYTDRI- 281 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-------- 328 N +LS RA + L+ GV++D IS + G+ + Sbjct: 282 --GSDASNLKLSQRRADTVANYLVSKGVAQDAISAV-GYGEANPVTGAKCDAVKGRKALI 338 Query: 329 ---SANRRIDILVEDRQ 342 + +RR++I V+ + Sbjct: 339 ACLAEDRRVEISVKGSK 355 >gi|310767218|gb|ADP12168.1| outer membrane protein A [Erwinia sp. Ejp617] Length = 355 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD + N +LS Sbjct: 227 KSDVLFTFNKANLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRI---GSEQYNQKLS 283 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337 RA S L+ G+ ++IS G + D + +RR++I Sbjct: 284 EKRAQSVVDYLVSKGIPSNKISA-RGEGESNPVTGNTCDSVKGRQALIDCLSPDRRVEIQ 342 Query: 338 VED 340 V+ Sbjct: 343 VKG 345 >gi|259908883|ref|YP_002649239.1| outer membrane protein A [Erwinia pyrifoliae Ep1/96] gi|224964505|emb|CAX56015.1| Outer membrane protein A [Erwinia pyrifoliae Ep1/96] gi|283478876|emb|CAY74792.1| Outer membrane protein A precursor [Erwinia pyrifoliae DSM 12163] Length = 355 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD + N +LS Sbjct: 227 KSDVLFTFNKANLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRI---GSEQYNQKLS 283 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337 RA S L+ G+ ++IS G + D + +RR++I Sbjct: 284 EKRAQSVVDYLVSKGIPSNKISA-RGEGESNPVTGNTCDSVKGRAALIDCLSPDRRVEIQ 342 Query: 338 VED 340 V+ Sbjct: 343 VKG 345 >gi|254502312|ref|ZP_05114463.1| OmpA family protein [Labrenzia alexandrii DFL-11] gi|222438383|gb|EEE45062.1| OmpA family protein [Labrenzia alexandrii DFL-11] Length = 190 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 7/116 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 II+ FD+ S+ E + L + L + + ++GH D Sbjct: 69 IINVGRRIYFDRGSATVSDEAKMTLDNQAKWLKQNKSWLVKVQGHADD---PGSEAAQKT 125 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340 LS RA + Y L++ GV+ R+ + G+ R D S NRR+ + + + Sbjct: 126 LSTQRATAVYNALIERGVNAKRMW-VKGYGVERPVTDCDAVTCQSQNRRVVVNLRE 180 >gi|239815674|ref|YP_002944584.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110] gi|239802251|gb|ACS19318.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110] Length = 172 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 FD S PE ++ L + + SI GHTD N L Sbjct: 65 ERIVYFDYDSYTVKPEFQSLIDGHARFLKANPQRRVSIEGHTDDR---GGREYNLALGQK 121 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 R+ + + L GVS+ +I +S F + + + + + NRR +I Sbjct: 122 RSEAVRRALTLLGVSDAQIEAVS-FGKEKPAVQGSGEEAWAQNRRAEI 168 >gi|332978389|gb|EGK15109.1| peptidoglycan-associated lipoprotein [Psychrobacter sp. 1501(2011)] Length = 170 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 R+ F SS E +L + LA + + + GHTD N L Sbjct: 65 RSIVRFPFDSSEIDAEAASILNEQVAFLASHPDARVLVAGHTDER---GSREYNHALGER 121 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 RA + L GV++ R+ IS + R + ++ NRR ++ Sbjct: 122 RAQAVRNYLASQGVTDARVETIS-YGEDRPVAAGTDEASHAQNRRAEL 168 >gi|332288152|ref|YP_004419004.1| outer membrane protein A [Gallibacterium anatis UMN179] gi|330431048|gb|AEC16107.1| outer membrane protein A [Gallibacterium anatis UMN179] Length = 361 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 17/123 (13%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLD 290 + +F + PE L + + + + S+ G+TD + N +LS + Sbjct: 237 SDVLFAFGKANLKPEAAQSLDNLQQEITKVGSLSSVEVAGYTDRI---GSDKYNQKLSQE 293 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILVE 339 RA + L+ +S D I + G+ + + +RR+++ V Sbjct: 294 RANTVANYLVSKSISPDVIKAV-GYGEANPVTGNTCDAVKGRKALIACLAPDRRVEVSVS 352 Query: 340 DRQ 342 +Q Sbjct: 353 GQQ 355 >gi|190895276|ref|YP_001985569.1| hypothetical protein RHECIAT_PC0000949 [Rhizobium etli CIAT 652] gi|190700937|gb|ACE95019.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652] gi|327193548|gb|EGE60440.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512] Length = 441 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 8/121 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASP--FRNIAR 282 ++ +F + ++ I VL + I+I GHTD P N Sbjct: 321 LLQSSTPELFQSARPELTKGFEPLVASIATVLKQNAELIGGITITGHTDNVPLQASNPLS 380 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 +N RLS RA + +L SGV ++ G A +D +ANRRI+IL++ Sbjct: 381 NNQRLSEARAATIASLLAASGVPAGQLKS-QGRAATEPLAGNDSREGRAANRRIEILIQK 439 Query: 341 R 341 R Sbjct: 440 R 440 >gi|262371750|ref|ZP_06065029.1| outer membrane protein A [Acinetobacter junii SH205] gi|262311775|gb|EEY92860.1| outer membrane protein A [Acinetobacter junii SH205] Length = 346 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 8/105 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S P+ + K+ E LA I GHTD + + N RLSL RA Sbjct: 227 RVFFDTNKSDIKPQYKSEIAKVAEKLAEYPNATARIEGHTDNT---GPRKLNERLSLARA 283 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 S L+ + V R+S GFA + + NRR+ Sbjct: 284 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRV 327 >gi|227540101|ref|ZP_03970150.1| outer membrane protein, peptidoglycan-associated lipoprotein [Sphingobacterium spiritivorum ATCC 33300] gi|227239962|gb|EEI89977.1| outer membrane protein, peptidoglycan-associated lipoprotein [Sphingobacterium spiritivorum ATCC 33300] Length = 671 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 I +D S + VL ++ L + I + HTD+ A+ N + Sbjct: 554 ISFTLENIYYDLDKSNIREDAKPVLNQLVHTLRDNPSLKIELSSHTDSR---ATAKYNMK 610 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-------ASDPMNSANRRIDILVE 339 LS +RA SA ++ G++ +RI G+ RL +D + ANRR +I V Sbjct: 611 LSQNRAQSAVDYIVSQGIARNRIIA-KGYGESRLINMCKDGVKCTDAEHQANRRTEIKVL 669 Query: 340 D 340 + Sbjct: 670 E 670 >gi|221369495|ref|YP_002520591.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131] gi|221162547|gb|ACM03518.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131] Length = 254 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 66/211 (31%), Gaps = 6/211 (2%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + + +T D E+ L P + + Sbjct: 44 RDAFAAARSGNGQARGLKLVTVDRIGPAPAVADVPNSLGAPAGEDPGLRPTASTDGAPGE 103 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + + L + + + G+L + F S++ + Sbjct: 104 TGRPVLGLPQGADRLAAADPPPEGRETAEVTPESFGLLDPALQVNVRIHFAFDSAVLASD 163 Query: 248 TIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 +L ++ V+ S I GHTDA N +LSL RA + L G++ Sbjct: 164 QTPLLAQLCTVMKASDIRLFQIVGHTDA---AGSEAYNQQLSLLRAEEVRRYLTGPCGIA 220 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDI 336 +R+ + G L SDP + NRR++ Sbjct: 221 PERLRAV-GMGERFLTNQSDPRSGENRRVEF 250 >gi|149202036|ref|ZP_01879009.1| OmpA domain protein [Roseovarius sp. TM1035] gi|149144134|gb|EDM32165.1| OmpA domain protein [Roseovarius sp. TM1035] Length = 635 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 9/169 (5%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV--LFETTRTGILISIIDQRNTPM 236 + K + + + L + + + + V L I+ I Sbjct: 439 TGRKTASAEIAQFLAEKLGEAEQYSIDVTYKEALDPVAGLPTPEECEAQIAGIQAERKIN 498 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ + ++ I +VL E + I GHTD+ N +LSL RA + Sbjct: 499 FEPGSAKIDAQGAAIMDDIADVLKKCGEVRMEIGGHTDSQ---GGEDMNAQLSLSRARAV 555 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L V I G+ ++ NRRI+ + + Sbjct: 556 LDELRMRRVLTSSIDA-KGYGESVPIADNETEEGRETNRRIEFRLIRPE 603 >gi|317491503|ref|ZP_07949939.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316921050|gb|EFV42373.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 351 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 75/225 (33%), Gaps = 19/225 (8%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP-PLSKEKILAMKRK 189 + + ++ + K ++ G + +E ++NK+ L A + Sbjct: 121 MVWRADGSANSATKGRYIDSNDTGVSPLAAIGVEYALNKDWATRLDYQFVSNIGDANETA 180 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 R + + T + + ++ +F+ + + P+ Sbjct: 181 ARPDNTLLSVGVTYRFGQDEAAPAPAPAPAPAPVVETKRFTLKSDVLFNFNKATLKPQGQ 240 Query: 250 VVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L ++ L++ + + G+TD + N +LS RA S L+ G+ Sbjct: 241 QALDQMYAQLSNLDPKDGSVVVLGYTDRI---GSEQYNQKLSEQRAQSVVDYLVSKGIPA 297 Query: 307 DRISKISGFAHHRLKI----ASDPMNSA-------NRRIDILVED 340 D+IS G + +A +RR++I V+ Sbjct: 298 DKISA-RGMGKADPVTGSTCDNVKARAALIECLAPDRRVEIEVKG 341 >gi|254700357|ref|ZP_05162185.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 5 str. 513] gi|261750850|ref|ZP_05994559.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 5 str. 513] gi|261740603|gb|EEY28529.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 5 str. 513] Length = 168 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS+ + L K + L + I+I GH D N L R Sbjct: 59 DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A + L GV +R+ IS + + R +D S NRR + V + G Sbjct: 116 AAATRDFLASRGVPANRMRTIS-YGNERPVAVCDADTCWSQNRRA-VTVLNGAG 167 >gi|78485827|ref|YP_391752.1| OmpA/MotB [Thiomicrospira crunogena XCL-2] gi|78364113|gb|ABB42078.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2] Length = 187 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + V++ + +A + + +++++G+ D N L RA + Sbjct: 87 FEFDRSEVQSQFYDVIKMNADYMALNDSAMVTVKGYCDER---GTREYNLALGERRANAV 143 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 L+ GVS RI+ + F ++ + NRR + Sbjct: 144 KNALVAEGVSPSRIN-VISFGEENPVDPAHNEAAWAKNRRAEF 185 >gi|182680300|ref|YP_001834446.1| peptidoglycan-associated lipoprotein [Beijerinckia indica subsp. indica ATCC 9039] gi|182636183|gb|ACB96957.1| peptidoglycan-associated lipoprotein [Beijerinckia indica subsp. indica ATCC 9039] Length = 172 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ SS L K L +I GH D N+ L R Sbjct: 63 DRVFFESDSSELTQTAQATLDKQAHWLQQYGRYTFTIEGHADER---GTREYNFALGARR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRR 333 A +A L+ G++ R+ IS + R D S NRR Sbjct: 120 AEAAKNYLVARGIATSRLRTIS-YGKERPVATCDDISCWSQNRR 162 >gi|167839008|ref|ZP_02465785.1| hypothetical protein Bpse38_20639 [Burkholderia thailandensis MSMB43] Length = 560 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + P+ + ++++G Sbjct: 336 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKAKVRPDFMHNIERLGL 393 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L + + Sbjct: 394 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARTVADELRTTALPGGARAPENAVQ 453 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 454 RSIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 485 >gi|42524180|ref|NP_969560.1| putative outer membrane protein [Bdellovibrio bacteriovorus HD100] gi|39576388|emb|CAE80553.1| putative outer membrane protein [Bdellovibrio bacteriovorus HD100] Length = 214 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 7/118 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 I ++ +FD + P + ++ ++ +++++G+TD + N Sbjct: 95 ITKLKSDILFDTGKADLKPAAQTNINQLAAIMKKYPENILTVKGYTDDT---GSQMVNNP 151 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS RA + L+ +GV ++ I G + + NRR++I + + Sbjct: 152 LSEQRAKAVSAQLVAAGVPAQTVTSI-GMGALNPVDPAKTKEARAKNRRVEIEITVDE 208 >gi|315181920|gb|ADT88833.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218] Length = 316 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 9/109 (8%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS + L+ + L + I I GHTD++ N +LS R Sbjct: 210 DALSFDSSSLNATQQ--QALRTLAATLNKQPQAQILIIGHTDST---GSDAYNTKLSTRR 264 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A +A VLM++ V+E RI + G R + NRR+++ + Sbjct: 265 AQAAADVLMENQVAEHRIK-VFGEGQTRPIDTNTTPAGRAHNRRVEVQI 312 >gi|315453876|ref|YP_004074146.1| peptidoglycan-associated lipoprotein [Helicobacter felis ATCC 49179] gi|315132928|emb|CBY83556.1| peptidoglycan-associated lipoprotein [Helicobacter felis ATCC 49179] Length = 227 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 67/207 (32%), Gaps = 8/207 (3%) Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 ++ S+ K+ + ++ +E+ + + + K+ Sbjct: 23 GAKPSKPPKSQSAENVQEQPTQSVKNTTVHPEGVQESTPAKSQTPQTSPISQTKEGQPGT 82 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQ 253 A ++ + + A+ + V FD P+ + Sbjct: 83 AHELETQNAQKNANATSETVPAPQEPQSEQEQFKSGEIVGQVYFDFDKYNVRPDMQDAVD 142 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + + + S + + G+TD N+ L RA S + L+ G+++D I IS Sbjct: 143 QGAQKIQDSKMKVLLEGNTDEF---GTGEYNFALGNKRALSVKEALVVKGIAQDNIRTIS 199 Query: 314 GFAHHRLKIASDPMN--SANRRIDILV 338 F + NRR+DI V Sbjct: 200 -FGESKPICLEKTKECYQKNRRVDIKV 225 >gi|328953892|ref|YP_004371226.1| peptidoglycan-associated lipoprotein [Desulfobacca acetoxidans DSM 11109] gi|328454216|gb|AEB10045.1| peptidoglycan-associated lipoprotein [Desulfobacca acetoxidans DSM 11109] Length = 191 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 I + F+ E+ +LQK L E I+I GH D R + N Sbjct: 76 IAFESEDVFFEYDQFTLTSESRSLLQKKASFLQKHPEIQITIEGHCD---IRGSSDYNLG 132 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 L RA SA L G++ +R+S IS + + D + NRR Sbjct: 133 LGQKRADSAKSYLQDLGIAGNRLSTIS-YGKEQPVAHGDTEEAHARNRR 180 >gi|254465277|ref|ZP_05078688.1| OmpA/MotB [Rhodobacterales bacterium Y4I] gi|206686185|gb|EDZ46667.1| OmpA/MotB [Rhodobacterales bacterium Y4I] Length = 172 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + +F P LQ LA + + ++I GH D N L R Sbjct: 62 DRVLFAIDQHTLSPAAQATLQGQARWLAQNGDYAVTIEGHADEQ---GTREYNLGLGAKR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333 A +A + L+ G+S RI +S + R + + S NRR Sbjct: 119 ANAAREYLISQGISGSRIKVVS-YGKERPLEICSDETCYSKNRR 161 >gi|332666217|ref|YP_004449005.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332335031|gb|AEE52132.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 595 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 10/147 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + S LS ++ I ++ + F SS P V++++ Sbjct: 450 RFLKSVLSRAGSNIASADEAEFNADDNIRETVSKKSWAIEFASGSSEFTPSARAVMEQLF 509 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM---KSGVSEDRISKI 312 L ++ + + GHTD N LS RA++ L + E R+ I Sbjct: 510 NDLVIASNLKVEVHGHTDNI---GDPAANLSLSERRAFAIKTWLENKSANNFPEGRV-SI 565 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 ++D + NRR++I+ Sbjct: 566 FSHGASNPVASNDTPAGRAKNRRVEII 592 >gi|307826489|ref|ZP_07656672.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] gi|307732463|gb|EFO03357.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] Length = 238 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 70/236 (29%), Gaps = 10/236 (4%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 + + + + Q + + K L +S + + Sbjct: 5 TPPKKTNEGLELKHTQSPAVDDGLQPPITQLQGEVTQNQAKGLTESAQNKGLELEPTQSP 64 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + S+ I + + S + + + +S++ Sbjct: 65 IDEGSQSAITQPQGEVTPDQAKGLTESAQPAGDSGFPTPAAEGKRSSQHEPVSLL-VLGG 123 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD-----NWRLS 288 F P + I ++ + + + GH D + N +S Sbjct: 124 GFFSSGQITPRANIQDAIDNIIPLIQTRPLDNVVVEGHADKWVPFGASPAQVSKLNENIS 183 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L RA + QVL K G++ DRI + G ++ + NRR++I + Q Sbjct: 184 LRRANAIAQVLKKKGIASDRII-VHGLGDTVPLASNLTYDGRMKNRRVEIKLLPAQ 238 >gi|293392950|ref|ZP_06637267.1| OmpA family protein [Serratia odorifera DSM 4582] gi|291424484|gb|EFE97696.1| OmpA family protein [Serratia odorifera DSM 4582] Length = 165 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + P + +QK+G L + GHTD N RLSL R Sbjct: 59 DKVLFGNNIGKLNPASTETVQKMGRALLSVDIVKFRLDGHTDNY---GEDSYNDRLSLRR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 A + +L G+ I G + + NRR+ I+V Sbjct: 116 ANAVADLLASVGIPRANIET-RGRGKRDPVADNRTASGRAENRRVSIIVT 164 >gi|147003|gb|AAA24242.1| outer membrane protein II [Escherichia blattae] Length = 240 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G+TD N RLS Sbjct: 121 KSDVLFNFNKSTLKPEGQQALDQLYTQLSNLDPKDGAVVVLGYTDRI---GSDAYNQRLS 177 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +I+ G + +A +RR++I Sbjct: 178 QQRAQSVVDYLVSKGIPAGKITA-QGQGESNPVTGSTCDNVKQRAALIDCLAPDRRVEIE 236 Query: 338 VED 340 V+ Sbjct: 237 VKG 239 >gi|146997|gb|AAA24239.1| outer membrane protein II [Escherichia blattae] Length = 241 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G+TD N RLS Sbjct: 122 KSDVLFNFNKSTLKPEGQQALDQLYTQLSNLDPKDGAVVVLGYTDRI---GSDAYNQRLS 178 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +I+ G + +A +RR++I Sbjct: 179 QQRAQSVVDYLVSKGIPAGKITA-QGQGESNPVTGSTCDNVKQRAALIDCLAPDRRVEIE 237 Query: 338 VED 340 V+ Sbjct: 238 VKG 240 >gi|329944219|ref|ZP_08292478.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328530949|gb|EGF57805.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 464 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSL 289 F+ S + VL + E + ++I GHTD N LS Sbjct: 178 DGDVTFEVDSDQLSAQADAVLANVVEQIKKYPSGGDLTITGHTDDV---ADDAHNQDLSE 234 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA + L K +SG ++ +D ANRR++I + + Sbjct: 235 RRAKAVSSRLKKLTDLSTWNESVSGKGESSPRVPNDSDEHRQANRRVEITLTPSK 289 >gi|240851216|ref|YP_002972619.1| peptidoglycan-associated lipoprotein [Bartonella grahamii as4aup] gi|240268339|gb|ACS51927.1| peptidoglycan-associated lipoprotein [Bartonella grahamii as4aup] Length = 173 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F SS + +L + E L H I I GH D N L R Sbjct: 63 DRVFFSLDSSSLDADAERILTRQAEWLLHYPYYSIMIEGHADER---GTREYNLALGQRR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + L+ GVSE RI IS + R + NRR Sbjct: 120 AVAVRNYLVSLGVSEQRIQTIS-YGKERPVAVCDDISCWNQNRR 162 >gi|149202853|ref|ZP_01879824.1| peptidoglycan-associated lipoprotein [Roseovarius sp. TM1035] gi|149143399|gb|EDM31435.1| peptidoglycan-associated lipoprotein [Roseovarius sp. TM1035] Length = 172 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F S + L L + + ++ GH D N L R Sbjct: 62 DRVLFAVDQSTLGSDAQATLDGQANWLTTNRDFTAVIEGHADEQ---GTREYNLALGARR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + + L+ GVS +R+ ++ + R +++ + NRR Sbjct: 119 ANAVQEYLIGRGVSPNRL-RVVSYGKERPIEICSNEACYAKNRR 161 >gi|256424251|ref|YP_003124904.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] gi|256039159|gb|ACU62703.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] Length = 613 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 12/113 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + P VL + + + + + + HTD+ N LS RA S Sbjct: 505 FDFNKAAINPAAAQVLDGLVKTIQENPDKSVELSAHTDSR---GNDAFNLALSQKRATSV 561 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341 L+ GV++ RIS G+ +L S+ + NRR + + + Sbjct: 562 MNYLISKGVAKSRISA-KGYGETKLLNRCGNGVNCSEDEHKLNRRTEFKLVKK 613 >gi|37704612|gb|AAR01578.1| OprF [Pseudomonas sp. MFY59] gi|37704620|gb|AAR01582.1| OprF [Pseudomonas sp. MFY68] gi|37704662|gb|AAR01603.1| OprF [Pseudomonas sp. MFY161] Length = 318 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + + GHT Sbjct: 212 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTTVEGHT 271 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL + G+ R+ + G+ R Sbjct: 272 DSV---GPDAYNQKLSERRANAVKQVLTQQYGIESSRVDSV-GYGETRPVA 318 >gi|89068039|ref|ZP_01155456.1| OmpA/MotB family protein [Oceanicola granulosus HTCC2516] gi|89046278|gb|EAR52335.1| OmpA/MotB family protein [Oceanicola granulosus HTCC2516] Length = 173 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F PE VL L + + ++ GH D N L R Sbjct: 61 DRVLFLVDQYTLTPEGRAVLDGQARWLQANADYRAVIEGHADEQ---GTREYNLALGSRR 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDRQG 343 A + + L+ GV R+ ++ + R +++ + NRR ++ G Sbjct: 118 ANAVREYLVSQGVPSSRLQTVT-YGKERPLEVCSAESCYAQNRRAVTVIAAGSG 170 >gi|86132229|ref|ZP_01050824.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85817148|gb|EAQ38331.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 674 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 11/120 (9%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + FD ++ VVL ++ L + + I+ HTD+ N Sbjct: 558 LFIDVAPIYFDFDLYSIREDSQVVLDELAAKLIKYKRIKMKIQSHTDSR---GPEAYNVP 614 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRRIDILVED 340 LS +RA + + L++ G+ RI + G+ + + + ++ + NRR + + Sbjct: 615 LSQNRAKATFDYLVEKGIDPTRI-QYQGYGNSQPVVECPAGQCTEEEHQLNRRSEFEITG 673 >gi|104779940|ref|YP_606438.1| outer membrane lipoprotein [Pseudomonas entomophila L48] gi|95108927|emb|CAK13623.1| putative outer membrane lipoprotein (OmpA domain) [Pseudomonas entomophila L48] Length = 166 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 7/116 (6%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRL 287 D +F + ++++IG+ L + + I GH DA A N +L Sbjct: 55 FDLSGKVLFGSDLDSLNSASESIVERIGKALLSVDIQRVRIDGHADA---SGKAAYNQQL 111 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 S RA S + L+ G+ I G + + NRR+ I+V Sbjct: 112 SERRAQSVAKALIGIGMQPQNIQT-RGLGSSQPVADNRTSTGRMENRRVSIVVASD 166 >gi|218887300|ref|YP_002436621.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758254|gb|ACL09153.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 307 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 17/153 (11%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L ++ ++ + + ++ I I + +F ++ +L +I VL Sbjct: 95 LRDMLWEDAERDINYQENGY---IQIFSINDEVLFRTGATELTERGAALLARIAPVLRGV 151 Query: 263 TEVISIRGHTDASP--------FRNIARD---NWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + GH + R + WRLSL RA + Y+ L GV R+ Sbjct: 152 EHPVLVAGHASPARDEEGILFRLRGDEKTLPTPWRLSLGRATAVYRRLADLGVPRGRML- 210 Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 I R + + NRR+DI+++ R Sbjct: 211 IEAHGDTRPRFDNLTPEGRRANRRVDIVLDRRN 243 >gi|70734242|ref|YP_257882.1| OmpA family protein [Pseudomonas fluorescens Pf-5] gi|68348541|gb|AAY96147.1| OmpA family protein [Pseudomonas fluorescens Pf-5] Length = 164 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +F + ++Q+IG+ L + + + GHTDA N +LS+ R Sbjct: 57 GKVLFGSDVETLNQASTEIVQRIGKALLSVDIQKVRVDGHTDA---SGKEAYNVQLSVRR 113 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 A S +VL + G+ E+ I ++ G ++ + NRR+ I+V Sbjct: 114 AKSVVKVLTQVGMREENI-QLRGLGSSEPVASNSTVAGRTENRRVSIVVIAD 164 >gi|49474668|ref|YP_032710.1| peptidoglycan-associated lipoprotein [Bartonella quintana str. Toulouse] gi|49240172|emb|CAF26636.1| Peptidoglycan-associated lipoprotein [Bartonella quintana str. Toulouse] Length = 172 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + F SS P+ VL + + L H + I I GH D N L R Sbjct: 62 DRVFFSLDSSSIEPDAEAVLIRQAQWLLRHPSYSIVIEGHADER---GTREYNLALGQRR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A + L+ GVS R+ IS + R + NRR + + G Sbjct: 119 AVAVRNYLISLGVSSQRMQTIS-YGKERPVAVCDDISCWNQNRRAVTKINNMNG 171 >gi|86130725|ref|ZP_01049325.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85819400|gb|EAQ40559.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 649 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 56/148 (37%), Gaps = 12/148 (8%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 LSG + + + + + G I+ I N FD P+ + L K+ + Sbjct: 506 LSGEIQEFLQLERAVQIAKPGDDIAKILNLNPIYFDFDKYYIRPDAEIELAKVLVYMETY 565 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I +R HTD+ N LS +R S L+ G++ R+ G+ +L Sbjct: 566 PSVRIDVRSHTDSR---GNDEYNRTLSQNRNVSTRDWLIAKGINPSRL-SGRGYGESQLV 621 Query: 322 I--AS-----DPMNSANRRIDILVEDRQ 342 ++ + + NRR + +V Sbjct: 622 NECSNGVQCSEEQHQLNRRSEFIVLSNN 649 >gi|260770556|ref|ZP_05879489.1| protein F-related protein [Vibrio furnissii CIP 102972] gi|260615894|gb|EEX41080.1| protein F-related protein [Vibrio furnissii CIP 102972] gi|315181629|gb|ADT88542.1| OmpA family protein [Vibrio furnissii NCTC 11218] Length = 209 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 10/122 (8%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPF 277 +++ + D FD SS ++ L +G L I I GHTD + Sbjct: 89 MPGNHVMVKLKDTVK---FDTGSSNVSQDSAYWLSVMGSFLSRERGIDIVIDGHTDNT-- 143 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 R N LS+ RA L+ V+ D I G+ + + NRR++ Sbjct: 144 -GKPRFNDALSVKRAQMVKNTLINKNVARDAIYT-RGYGEYVPACNNGTYEGRACNRRVE 201 Query: 336 IL 337 +L Sbjct: 202 LL 203 >gi|86142013|ref|ZP_01060537.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein-like [Leeuwenhoekiella blandensis MED217] gi|85831576|gb|EAQ50032.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein-like [Leeuwenhoekiella blandensis MED217] Length = 435 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 8/104 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P + +++I + + +T I GHTD+ N LS RA + Sbjct: 333 FDSGSASIQPASYASIKQIAQAIQSDATGNYLITGHTDSD---GDVALNMPLSESRAEAV 389 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336 L+ G+ R+ G + + NRR+ I Sbjct: 390 KAALVSEFGIDSSRLQTA-GKGSSEPVSTENTVTAKALNRRVTI 432 >gi|254714557|ref|ZP_05176368.1| peptidoglycan-associated lipoprotein [Brucella ceti M644/93/1] gi|254717454|ref|ZP_05179265.1| peptidoglycan-associated lipoprotein [Brucella ceti M13/05/1] gi|261219284|ref|ZP_05933565.1| peptidoglycan-associated lipoprotein [Brucella ceti M13/05/1] gi|261322345|ref|ZP_05961542.1| peptidoglycan-associated lipoprotein [Brucella ceti M644/93/1] gi|260924373|gb|EEX90941.1| peptidoglycan-associated lipoprotein [Brucella ceti M13/05/1] gi|261295035|gb|EEX98531.1| peptidoglycan-associated lipoprotein [Brucella ceti M644/93/1] Length = 168 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS+ + L K + L + I+I GH D N L R Sbjct: 59 DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A + L GV +R+ IS + + R +D S NRR + V + G Sbjct: 116 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRRA-VTVLNGAG 167 >gi|330752331|emb|CBL87285.1| protein with similarity to outer membrane OmpA family protein [uncultured Flavobacteria bacterium] Length = 266 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 60/147 (40%), Gaps = 6/147 (4%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 K I + L + + + ++ + +F + + L ++ Sbjct: 122 KFIGAQSIKLELNKAIPKQKKKWFERELVKGDKIRLKNILFVGGEARFRAVSYKDLNQLL 181 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 V+ I + GH ++ P + N LS RA + + L+K G+ E R+S I GF Sbjct: 182 AVMNAYPNLKILVEGHVNS-PGKRNTNTNQVLSTQRAEAVVKYLIKKGIRESRLSFI-GF 239 Query: 316 AHHRLKIASDPMN---SANRRIDILVE 339 + ++ + + NRR++ILV+ Sbjct: 240 GNTKMIYPNTKLEYEMQFNRRVEILVQ 266 >gi|37704622|gb|AAR01583.1| OprF [Pseudomonas sp. MFY69] Length = 318 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + + GHT Sbjct: 212 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTTVEGHT 271 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL + GV R+ + G+ R Sbjct: 272 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSV-GYGETRPVA 318 >gi|262368608|ref|ZP_06061937.1| peptidoglycan-associated lipoprotein [Acinetobacter johnsonii SH046] gi|262316286|gb|EEY97324.1| peptidoglycan-associated lipoprotein [Acinetobacter johnsonii SH046] Length = 189 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS + LQ + L + +++ GHTD N L RA + Sbjct: 81 FDYDSSDLSNDDYQTLQAHAQFLMANANSRVALTGHTDER---GTREYNMALGERRAKAV 137 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 L+ +GVS +++ +S + A N+ NRR++I Sbjct: 138 ESFLITTGVSPNQLEAVS-YGKEMPINAGHDENAWKENRRVEI 179 >gi|146329268|ref|YP_001210055.1| OmpA domain-containing protein [Dichelobacter nodosus VCS1703A] gi|146232738|gb|ABQ13716.1| OmpA domain protein [Dichelobacter nodosus VCS1703A] Length = 194 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 + F S+ +I V+ + L + + GHTD N L Sbjct: 88 KDRVIYFSYDSAQLDSRSIAVITEHARYLRDHPDTRVVLEGHTDER---GSREYNIGLGE 144 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RAYS ++ + GV++ ++ ++ + R + +++ + NRR+ I+ Sbjct: 145 RRAYSVKRIFEQQGVAQTQM-RVLSYGEERPALWCSNESCYARNRRVVII 193 >gi|114799688|ref|YP_760523.1| OmpA family protein [Hyphomonas neptunium ATCC 15444] gi|114739862|gb|ABI77987.1| OmpA family protein [Hyphomonas neptunium ATCC 15444] Length = 378 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 80/262 (30%), Gaps = 6/262 (2%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG--STNQKKQYQRL 127 P + + + N + S+ + D +T ++ L + + K + L Sbjct: 105 RPVTRVRAGFATTAPAQANSIKASTTSPPDPEFLFRLTAGTLSLNGNIPTQSLKTDLEDL 164 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + + + N G + ++ + Sbjct: 165 AESRKSPDHLIDVINALNVTGGALPNGFEAVAQRGIDTLSECVSGTASFSDLTFNLRCQA 224 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +++ + ++ L V I + +S + + F S I Sbjct: 225 DDTKVESIRASANAGLPLGVFGTIEILPIQAVASCEEELSRLLEAARIEFAPGSVILNVA 284 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + VL + + + GHTD + N +LSL RA + +++ GV D Sbjct: 285 SGPVLDLAARAASDCPGTLRVEGHTDDTGNPG---YNDQLSLRRAEAVRAAMIERGVPPD 341 Query: 308 RISKISGFAHHRLKIASDPMNS 329 R+ G+ + +++ + Sbjct: 342 RLVAA-GYGQNNPVSSNETEDG 362 >gi|37680143|ref|NP_934752.1| outer membrane protein [Vibrio vulnificus YJ016] gi|320156108|ref|YP_004188487.1| outer membrane protein [Vibrio vulnificus MO6-24/O] gi|326423995|ref|NP_761229.2| outer membrane protein [Vibrio vulnificus CMCP6] gi|37198889|dbj|BAC94723.1| outer membrane protein [Vibrio vulnificus YJ016] gi|319931420|gb|ADV86284.1| outer membrane protein [Vibrio vulnificus MO6-24/O] gi|319999372|gb|AAO10756.2| Outer membrane protein [Vibrio vulnificus CMCP6] Length = 223 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 12/146 (8%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + L + ++ V+ + + + N F SS L+ + Sbjct: 84 DQQEKALREALLNSGVQVERVGENQLLLRLE-----NGIGFSSSSYALDSSIHNTLKGVA 138 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 ++L + + G TD++ N LS RA S L+ V+ R G Sbjct: 139 QILVEYPDTSLVIDGFTDST---GNDASNQILSERRAESVRSFLISQNVAAGRAVA-RGN 194 Query: 316 AHHRLKIASDPMNSA--NRRIDILVE 339 + NRR++I + Sbjct: 195 GERYPLCTNSTAEGRACNRRVEIQIL 220 >gi|307944419|ref|ZP_07659759.1| outer membrane porin F [Roseibium sp. TrichSKD4] gi|307772168|gb|EFO31389.1| outer membrane porin F [Roseibium sp. TrichSKD4] Length = 164 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + S+ + +L L + I+GH D N LS R Sbjct: 45 RSILFLEGSAALDENSQALLVNQATWLKTYPNWLVKIQGHADD---PGTEAANKTLSTQR 101 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 A L+ GV R+ + G+ R DP NRR+ + + + Sbjct: 102 AEVVQAALIAQGVDAKRLW-VKGYGIERPVTDCDPEACQRLNRRVVLNLRE 151 >gi|56698451|ref|YP_168825.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3] gi|56680188|gb|AAV96854.1| OmpA domain protein [Ruegeria pomeroyi DSS-3] Length = 637 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 7/114 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 + F+ S+ + +I ++L + I+GHTD+ N +LS Sbjct: 494 NDKIAFEPGSATIAASASGTMDRIADLLQSCGPIRLEIQGHTDSQ---GREEMNQQLSQA 550 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA S L V + + G+ + + + NRRI+ + + Sbjct: 551 RAQSVLNELRARRVLTASYAAV-GYGESQPIADNGTEDGREANRRIEFRLIRPE 603 >gi|225849650|ref|YP_002729884.1| OmpA family protein [Persephonella marina EX-H1] gi|225646341|gb|ACO04527.1| OmpA family protein [Persephonella marina EX-H1] Length = 235 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 62/151 (41%), Gaps = 13/151 (8%) Query: 195 LAKKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 L K I+ + + + E I++ + + +F S+ ++ L+ Sbjct: 72 LQKDIALEIKNRIKRILPMHAYQIEAIENYIVVRLFND---VIFKPDSAELTEKSKKALR 128 Query: 254 KIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + L + + I GH D W+LS+ RA Q L++ GV+ ++I Sbjct: 129 GVANALKALDKAYSEVLINGHA---YVVTKGIDPWKLSIKRAVVVAQYLIEHGVNPEKI- 184 Query: 311 KISGFAHHRLKIA-SDP-MNSANRRIDILVE 339 ++G+ + + + P + N R++I ++ Sbjct: 185 AVTGYGNTKPVYTWNHPLLKRRNDRVEIFIK 215 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ P+ +W I ++D M++L+ FF++++ ++ D YF Sbjct: 3 RKKKEECPSV-PAWIISFSDLMSLLLTFFILLYSMSVLDIKKLMKFLWYFQ 52 >gi|167913946|ref|ZP_02501037.1| hypothetical protein Bpse112_25907 [Burkholderia pseudomallei 112] Length = 483 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 270 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 327 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 328 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 387 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 388 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 419 >gi|310816576|ref|YP_003964540.1| OmpA/MotB family protein [Ketogulonicigenium vulgare Y25] gi|308755311|gb|ADO43240.1| OmpA/MotB family protein [Ketogulonicigenium vulgare Y25] Length = 185 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F S E +L + L +++ + GH D N L R Sbjct: 75 DRILFAVDQSSVSSEASQILNGQAQWLQTNSQYGIVIEGHADEQ---GTREYNVALGARR 131 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + + L+ G+S +RI +S + R +++ + NRR Sbjct: 132 ANAVREYLISRGISANRIRTVS-YGKERPIAVCSAESCYTQNRR 174 >gi|228018089|gb|ACP52723.1| fibronectin-binding protein [Campylobacter coli] gi|228018119|gb|ACP52738.1| fibronectin-binding protein [Campylobacter coli] gi|228018121|gb|ACP52739.1| fibronectin-binding protein [Campylobacter coli] gi|228018123|gb|ACP52740.1| fibronectin-binding protein [Campylobacter coli] gi|228018137|gb|ACP52747.1| fibronectin-binding protein [Campylobacter coli] Length = 224 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD P +++I ++L + +I GHTD N +LS RA S Sbjct: 136 FDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNI---GSRSYNQKLSERRANSV 192 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 + L K GV + RI + G+ + + ++D Sbjct: 193 AKKLEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 224 >gi|124004158|ref|ZP_01689004.1| immunogenic 75 kDa protein PG4 [Microscilla marina ATCC 23134] gi|123990228|gb|EAY29727.1| immunogenic 75 kDa protein PG4 [Microscilla marina ATCC 23134] Length = 660 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/276 (13%), Positives = 74/276 (26%), Gaps = 10/276 (3%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 FG T S G F + + TK + + + Sbjct: 385 DFGIIYNTDSTGYFSSDREGGKGGDDIYHFLDQTPKTKTFNYFLAIDVAVEDTVTQEDIP 444 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + + K + + + ++ Sbjct: 445 LPGSKVEVYEGTIASIKKGSKPIHIFTADAKGHVKEFPVKVKTDYVIKAGNNVSKVQYIT 504 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF-DKSSSIPLPETI 249 ++ + + T + + + +F D + P+ Sbjct: 505 NEEEYSMLGREADQDDPKYKKAVNDIHLQTTVYLKPVLGYEFEAIIFYDFARWEIRPDAA 564 Query: 250 VVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 L + + + + HTDA ++N LS RA SA L+ G+ D Sbjct: 565 KELDERVLTFLKNNPKLIVELGSHTDAR---GTDQNNLILSQKRAKSAVDYLISKGIDPD 621 Query: 308 RISKISGFAHHRLK---IASDPMNSANRRIDILVED 340 RI G+ LK ++ + ANRR + V Sbjct: 622 RIKA-KGYGETDLKIKEAKTEEEHQANRRTTVKVLG 656 >gi|297184220|gb|ADI20338.1| outer membrane protein and related peptidoglycan-associated (lipo)proteins [uncultured alpha proteobacterium EB080_L27A02] Length = 618 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 7/117 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I+ I F+ I + + V++ I +VL E I+GHTD+ N Sbjct: 492 INTIISNTKIRFEPGKVIINDDNLTVIKSIADVLRTCPEAKFEIQGHTDS---SGSEELN 548 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 LS RA + L+ V IS G+ + NRRI+I + Sbjct: 549 QNLSQSRAEAVLFELLNRRVLTSGISA-KGYGSISPIADNKTEEGREINRRIEIKLL 604 >gi|194337186|ref|YP_002018980.1| peptidoglycan-associated lipoprotein [Pelodictyon phaeoclathratiforme BU-1] gi|194309663|gb|ACF44363.1| peptidoglycan-associated lipoprotein [Pelodictyon phaeoclathratiforme BU-1] Length = 157 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 +D S + + L+ + +TE I GH D A N L R Sbjct: 52 GDVFYDFDRSELRADAVEQLKTNFNWIQANTEKSVIIEGHCDER---GTAEYNLALGQRR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A SA ++ GV+ R+ +S F + +++ + NRR Sbjct: 109 ANSAKDYIVNLGVAPVRLKTVS-FGEEKPFADGSNEEAWAQNRR 151 >gi|114771339|ref|ZP_01448759.1| OmpA domain protein [alpha proteobacterium HTCC2255] gi|114548264|gb|EAU51151.1| OmpA domain protein [alpha proteobacterium HTCC2255] Length = 618 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 7/117 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I+ I F+ I + + V++ I +VL E I+GHTD+ N Sbjct: 492 INTIISNTKIRFEPGKVIINDDNLTVIKSIADVLRTCPEAKFEIQGHTDS---SGSEELN 548 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 LS RA + L+ V IS G+ + NRRI+I + Sbjct: 549 QNLSQSRAEAVLFELLNRRVLTSGISA-KGYGSISPIADNKTEEGREINRRIEIKLL 604 >gi|302381978|ref|YP_003817801.1| peptidoglycan-associated lipoprotein [Brevundimonas subvibrioides ATCC 15264] gi|302192606|gb|ADL00178.1| peptidoglycan-associated lipoprotein [Brevundimonas subvibrioides ATCC 15264] Length = 184 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 35/103 (33%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD S PE L L + + I G+ D N L R Sbjct: 75 DRIYFDLDSYQVSPEAYPRLDAQAAWLQRYPQVQVRIEGNADER---GTREYNLALGARR 131 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332 A S L+ GV RI IS F R A++ + NR Sbjct: 132 AESIRNYLIDRGVPAGRIDTIS-FGKERPIAQGANEDAWARNR 173 >gi|124002443|ref|ZP_01687296.1| OmpA family protein [Microscilla marina ATCC 23134] gi|123992272|gb|EAY31640.1| OmpA family protein [Microscilla marina ATCC 23134] Length = 756 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 ++ F+ + + I L+ + L + ++I GHTD A LS Sbjct: 648 QSVAFFEYNKYELKDKFIKNLEPFIKYLQKNKNAELAIYGHTDQV---GTAAACLLLSQR 704 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS---DPMNSANRRIDILVED 340 RA + Q ++ GV+ RI+ G+ + + D NRRI++L+ + Sbjct: 705 RANAIKQYFVRHGVAAKRITA-KGYGKAKPIWKNEKHDWQAKENRRIELLLLE 756 >gi|148549735|ref|YP_001269837.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1] gi|148513793|gb|ABQ80653.1| OmpA/MotB domain protein [Pseudomonas putida F1] Length = 162 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287 D +F ++ ++++IG+ L + + + GH D+ A N +L Sbjct: 51 YDLSGKVLFGSDLDSLNGQSQAIVERIGKALLGVGIQGVRVDGHADS---SGKAAYNQQL 107 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 S RA S + L+ G+ I G + + NRR+ I+V Sbjct: 108 SERRAQSVTKALVGIGMQAQNIQS-RGLGSSQPVADNRTSAGRTENRRVSIVV 159 >gi|255263704|ref|ZP_05343046.1| OmpA domain protein [Thalassiobium sp. R2A62] gi|255106039|gb|EET48713.1| OmpA domain protein [Thalassiobium sp. R2A62] Length = 632 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 32/262 (12%), Positives = 75/262 (28%), Gaps = 24/262 (9%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 D+ ++ + + + ++ + + + + S + Sbjct: 342 PEAPDADDQGPPEFTAIRSPEGLVQLRGRVKDDLMNTAAENYAKARLRISDVTMGTRLDG 401 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + + + E + R + ++ +S L+++ + + Sbjct: 402 DLPANWSVRVLAGIEALAELSNGAVVVQPDVVTVRGNTGNQGATAKISQLLSEKLGEAED 461 Query: 217 FETTRTGI-----------------LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 F + I F+ S+ + +I E+L Sbjct: 462 FRIDVKYVEQLDPIAALPSPEECIEQIQAATSNAKITFEPGSANIDAGARSTVDQIAEIL 521 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 T I I G+TD+ N +LS RA + L V + I G+ Sbjct: 522 QRCTSTKIEIAGYTDSQ---GREVMNQQLSQQRAEAVLTALRARRVPTSAFTAI-GYGEE 577 Query: 319 RLKIASDPMNSA--NRRIDILV 338 ++ + NRRI+ + Sbjct: 578 SPIADNETEDGREANRRIEFKL 599 >gi|332140722|ref|YP_004426460.1| sodium-type flagellar protein MotY [Alteromonas macleodii str. 'Deep ecotype'] gi|327550744|gb|AEA97462.1| sodium-type flagellar protein MotY [Alteromonas macleodii str. 'Deep ecotype'] Length = 290 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 8/107 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAY 293 + +S+ + L IGE L +E+ + G+TD+ +N +LS+ RA Sbjct: 185 SYQNNSTELTKYSQKRLTMIGEYLKEDSELELVLLDGYTDSY---GGRWNNEQLSIRRAN 241 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 L GV EDRI +++G R +D + NRR+ + + Sbjct: 242 EVKSYLTTLGVPEDRI-QLTGHGEKRHIAPNDTRESRAQNRRVVVRL 287 >gi|282859313|ref|ZP_06268425.1| OmpA family protein [Prevotella bivia JCVIHMP010] gi|282587893|gb|EFB93086.1| OmpA family protein [Prevotella bivia JCVIHMP010] Length = 226 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 60/148 (40%), Gaps = 8/148 (5%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K++ ++ V + V+ V + ++ + +F +S + L + Sbjct: 74 MDKVAREVASRVPNASVEKVTDANGLQCVKVTF---DSGILFPLNSYTLSSASKKDLYEF 130 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 +V+ + + I+G+TDA N LS +RA + L +GVS +I + G Sbjct: 131 AKVMKANADCDVAIQGYTDA---SGSDNINLPLSQNRANAVSSCLRSNGVSGRQIRSVEG 187 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ NRR+++ + + Sbjct: 188 LGSANPI-ENARVSQKNRRVEVYMYASE 214 >gi|262173862|ref|ZP_06041539.1| protein F-related protein [Vibrio mimicus MB-451] gi|261891220|gb|EEY37207.1| protein F-related protein [Vibrio mimicus MB-451] Length = 207 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 12/160 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++ + + L+ + L + N + + I + +NT FD Sbjct: 50 APQLNSAGVQGPLRQVRTSSYEALRQFLLSNGIDHEIMPGDYPMIKL-----KNTIKFDT 104 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S+ ++ L ++ + LA + + + GHTD + + N LS RA S Sbjct: 105 GSAKVSVQSKQWLDRMAQFLASESGIDIVLEGHTDNT---GAQKFNDTLSEKRASSVKTA 161 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 L++ V+++ I G+ H + + NRR+++ Sbjct: 162 LVQRQVAQNAIYT-RGYGEHVPACTNKTKNGRACNRRVEV 200 >gi|167897282|ref|ZP_02484684.1| hypothetical protein Bpse7_26327 [Burkholderia pseudomallei 7894] Length = 481 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 268 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 325 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 326 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 385 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 386 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 417 >gi|227536324|ref|ZP_03966373.1| outer membrane protein, peptidoglycan-associated lipoprotein [Sphingobacterium spiritivorum ATCC 33300] gi|227243821|gb|EEI93836.1| outer membrane protein, peptidoglycan-associated lipoprotein [Sphingobacterium spiritivorum ATCC 33300] Length = 650 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 12/116 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +D + +L ++ + + I + HTD+ A+ N +LS +R Sbjct: 538 ENIYYDLDKYNIREDAKPILNQLVRTMRDNPTLKIELSSHTDSR---ATAKYNMKLSQNR 594 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 A +A ++ G++ DRI G+ +L SD + ANRR +I V + Sbjct: 595 AQAAVDYIVSRGIARDRIVA-KGYGESKLVNKCADGVKCSDAEHQANRRTEIKVLE 649 >gi|298530631|ref|ZP_07018033.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510005|gb|EFI33909.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 274 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 17/155 (10%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L L+ D+ K + F R + I +++ + E I VL K+ VL Sbjct: 93 KQLMPLLWDDKRKDLNFLEKRF---VQIFSINTELLYEPGETELSSEGIEVLDKVVPVLK 149 Query: 261 HSTEVISIRGHTDASPFRNIA-----------RDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + GHT A WRLSLDRA + Y+ +M+ GV + + Sbjct: 150 DLEYPVLLAGHTSLVRDEFGAGWQALKDDVIINPTWRLSLDRALNVYRYIMEQGVDPE-M 208 Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 ++ F + + + NRR++I+++ R Sbjct: 209 VRLEAFGEFQPRYGTRTEANRRQNRRVEIVLDRRN 243 >gi|254441098|ref|ZP_05054591.1| OmpA family protein [Octadecabacter antarcticus 307] gi|198251176|gb|EDY75491.1| OmpA family protein [Octadecabacter antarcticus 307] Length = 226 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ L++ + E + GHTD + N RL L RA + Sbjct: 83 FPFNSTALDASARATLRQQANWIRQFPEVRFKVFGHTD---LVGSSAYNRRLGLRRAEAV 139 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L G+S R+ + F + I ++ NRR Sbjct: 140 VLYLSSQGISRSRLEAVVTFGETQPLIVTEGRERRNRR 177 >gi|114778405|ref|ZP_01453252.1| outer membrane protein A precursor [Mariprofundus ferrooxydans PV-1] gi|114551368|gb|EAU53925.1| outer membrane protein A precursor [Mariprofundus ferrooxydans PV-1] Length = 360 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 17/130 (13%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284 + D +F + S E L K E L S E + + G+TD N Sbjct: 232 VFASDSSANSLFGFNRSTLRNEGKRALDKFVESLKGASFETMVVTGYTDRI---GTDEYN 288 Query: 285 WRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--N---------R 332 +LS RA + L+K G+ D+I+ G + N R Sbjct: 289 QKLSERRANAVRDYLVKFGGIPADKITA-RGAGESNPVTKREDCAGKSGNPLITCLAPDR 347 Query: 333 RIDILVEDRQ 342 R+++ V + Sbjct: 348 RVEVEVTATR 357 >gi|154247009|ref|YP_001417967.1| peptidoglycan-associated lipoprotein [Xanthobacter autotrophicus Py2] gi|154161094|gb|ABS68310.1| Peptidoglycan-associated lipoprotein [Xanthobacter autotrophicus Py2] Length = 164 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + P+ L + + L +I GH D N L R Sbjct: 55 DRVFFESDQTDLTPQARATLDRQAQWLQQWNRYTFTIEGHADER---GTREYNIALGAKR 111 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A S L G+ R+ IS + R +D S NRR Sbjct: 112 AQSVRDYLAARGIDPARMRTIS-YGKERPVAVCNDISCWSQNRR 154 >gi|209964174|ref|YP_002297089.1| OmpA family protein (probable proton motor, MotY) [Rhodospirillum centenum SW] gi|209957640|gb|ACI98276.1| OmpA family protein (probable proton motor, MotY) [Rhodospirillum centenum SW] Length = 355 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289 + T FD + P+ VLQ + + + GH D A N RLS+ Sbjct: 248 RNFTVFFDWDKATLTPDAEKVLQSVAADARTGGIAALQVTGHADT---SGPADYNQRLSM 304 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 RA + L+ G+ I I G + + +NRR I+ Sbjct: 305 RRAEAVRDYLIAQGIPAGEI-AIEGRGETDPLVPTADGVREPSNRRGVII 353 >gi|254689864|ref|ZP_05153118.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 6 str. 870] gi|256258118|ref|ZP_05463654.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 9 str. C68] gi|260755394|ref|ZP_05867742.1| OmpA family protein [Brucella abortus bv. 6 str. 870] gi|260884410|ref|ZP_05896024.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 9 str. C68] gi|297248966|ref|ZP_06932674.1| outer membrane lipoprotein omp16 [Brucella abortus bv. 5 str. B3196] gi|260675502|gb|EEX62323.1| OmpA family protein [Brucella abortus bv. 6 str. 870] gi|260873938|gb|EEX81007.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 9 str. C68] gi|297174099|gb|EFH33456.1| outer membrane lipoprotein omp16 [Brucella abortus bv. 5 str. B3196] Length = 168 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS+ + L K + L + I+I GH D N L R Sbjct: 59 DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A + L GV +R+ IS + + R +D S NRR + V + G Sbjct: 116 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRRA-VTVLNGAG 167 >gi|254447387|ref|ZP_05060853.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015] gi|198262730|gb|EDY87009.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015] Length = 204 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 60/155 (38%), Gaps = 13/155 (8%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR----NTPMFDKSSSIPLPETI 249 + +++ L I+ D R +F +S+ Sbjct: 38 AIQFELTQDLEAEKQRRQALERALADPLASGRITFQDGRIGISGNLLFRINSADLQSGGN 97 Query: 250 VVLQKIGEVLA----HSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKSG 303 VLQ + E L E++ + G TD N+ RDNW LS RA + + L++ G Sbjct: 98 QVLQDLAEPLKVYLSQHDELLMVSGFTDDLSLHEDNLYRDNWGLSAQRALTVTRTLVEQG 157 Query: 304 VSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 + +DR+ + F + + + + NRR++I Sbjct: 158 LPQDRLFAAA-FGANAPTVPNRDAASRAKNRRVEI 191 >gi|146311126|ref|YP_001176200.1| outer membrane protein A [Enterobacter sp. 638] gi|145318002|gb|ABP60149.1| OmpA domain protein transmembrane region-containing protein [Enterobacter sp. 638] Length = 351 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 223 KSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 279 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ ++I G + +A +RR++I Sbjct: 280 EKRAQSVVDYLVSKGIPANKI-SPRGMGESNPVTGATCDNVKPRAALIDCLAPDRRVEIE 338 Query: 338 VED 340 V+ Sbjct: 339 VKG 341 >gi|153835168|ref|ZP_01987835.1| outer membrane protein [Vibrio harveyi HY01] gi|148868362|gb|EDL67484.1| outer membrane protein [Vibrio harveyi HY01] Length = 330 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ E+ L +I ++L + + I G TD ++ N +L+ RA S Sbjct: 222 FGFDSTKVSQESEQKLLEIQKLLVSYPQSQVEIVGFTDDR---GASQYNEKLAKRRAQSI 278 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + L GV D+I ++ ++ + NRR+++ + Sbjct: 279 AKYLESKGVKADQI-SLTSKGELDPVASNHSEDGRVKNRRVEVSI 322 >gi|260773875|ref|ZP_05882790.1| protein F-related protein [Vibrio metschnikovii CIP 69.14] gi|260610836|gb|EEX36040.1| protein F-related protein [Vibrio metschnikovii CIP 69.14] Length = 208 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 79/201 (39%), Gaps = 13/201 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 SL D +L + + + ++ L P S Q + S+L Sbjct: 17 SLATDKMFKSNLLDTAPKNDAEVRYPDWRLAPASLMAAKTESMPATHQPMKTLSDSSLES 76 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 ++ N + L T + + + F S++ ++ L ++G LA++ ++ Sbjct: 77 FLSANGLDYELIPGDHTMVKL-----KRAVQFQTGSAVVPSASVQWLAQLGRYLANTPQI 131 Query: 266 ISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + GHTD + R N LS+ RA + +L++ VS I G+ H + Sbjct: 132 DIVIEGHTDNT---GTERFNDGLSMRRADTVKNILLEQQVSLAAIYT-RGYGEHTPACTN 187 Query: 325 DP--MNSANRRIDIL-VEDRQ 342 + NRR+++L + D Q Sbjct: 188 QTSQGRACNRRVELLMIMDSQ 208 >gi|124383073|ref|YP_001024835.1| hypothetical protein BMA10229_1027 [Burkholderia mallei NCTC 10229] gi|124291093|gb|ABN00363.1| OmpA domain protein [Burkholderia mallei NCTC 10229] Length = 560 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 347 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 404 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 405 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 464 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 465 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 496 >gi|116326910|ref|YP_796630.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332434|ref|YP_802152.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119654|gb|ABJ77697.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116126123|gb|ABJ77394.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 545 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S L ++ +L+ + L + + I GHTD +DN LS +RA + Sbjct: 442 FALGSYEILEDSFPILENLNSYLRENPGIKIRIIGHTD---LNGDYQDNIILSHNRANAV 498 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-SDPM-NSANRRIDILV 338 L++ G+ RI G I DP + NRR + + Sbjct: 499 KDYLVRKGIDSGRIVT-DGKGSSEPIIPRKDPKTDYKNRRTEFQI 542 >gi|86139070|ref|ZP_01057641.1| OmpA domain protein [Roseobacter sp. MED193] gi|85824301|gb|EAQ44505.1| OmpA domain protein [Roseobacter sp. MED193] Length = 640 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 F+ S+ + VVL I +L + I+GHTD+ N LS Sbjct: 494 SSGKISFEPGSATVAGGSSVVLDHIASILEKCGPIRLEIQGHTDSQ---GREGMNQALSQ 550 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA S L + I G+ + ++D NRRI+ + Sbjct: 551 SRAQSILNELRARRIRTSAFIAI-GYGESQPIASNDSEEGREANRRIEFRL 600 >gi|325288156|ref|YP_004263946.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324323610|gb|ADY31075.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 638 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 11/119 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289 FD P + LQK+ VL I I HTD+ N LS Sbjct: 523 NVEPIYFDYDKYDITPRAEIELQKVLFVLKEFPKTKIKIESHTDSR---GKDAYNLELSD 579 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341 +RA S + L+ GV DRI +GF +LK S+ + NRR D ++ + Sbjct: 580 NRAKSTRRYLVSKGVDIDRIESANGFGELKLKNKCSNGVKCSEQEHLVNRRSDFIIVAK 638 >gi|206562090|ref|YP_002232853.1| putative outer membrane protein [Burkholderia cenocepacia J2315] gi|198038130|emb|CAR54078.1| putative outer membrane protein [Burkholderia cenocepacia J2315] Length = 239 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ P+ L + ++ + I G TD++ N LS RA + Sbjct: 136 FAFDSAALTPDARAQLDRFVDINSGIEFRRVAITGFTDST---GSNTHNLALSASRARNV 192 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 L +G+ G ++ + NRR++I ++ + Sbjct: 193 MNYLRSNGLKAQSFVS-EGLGAADPVASNATAEGRAQNRRVEIRIDAK 239 >gi|167722659|ref|ZP_02405895.1| hypothetical protein BpseD_26829 [Burkholderia pseudomallei DM98] Length = 480 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 267 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 324 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 325 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 384 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 385 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 416 >gi|167848689|ref|ZP_02474197.1| hypothetical protein BpseB_25726 [Burkholderia pseudomallei B7210] Length = 486 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 273 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 330 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 331 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 390 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 391 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 422 >gi|330968986|gb|EGH69052.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT] Length = 96 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 6/77 (7%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--D 325 + G+TD++ A N LS RA S L++ GV R+ + G+ + + Sbjct: 14 VEGYTDST---GSASYNQSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSN 69 Query: 326 PMNSANRRIDILVEDRQ 342 + NRR+++ + + Sbjct: 70 SGRAMNRRVEVTISNDN 86 >gi|319956698|ref|YP_004167961.1| ompa/motb domain protein [Nitratifractor salsuginis DSM 16511] gi|319419102|gb|ADV46212.1| OmpA/MotB domain protein [Nitratifractor salsuginis DSM 16511] Length = 173 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 8/108 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLD 290 F P+ + + + S+ I I G+ D N L L Sbjct: 66 KMVYFSTDRYDVEPDQLQRIMSDMPKIQKLASSGKIRIEGNCDEM---GTDEYNHALGLK 122 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 RA + +L+ +G+ RI +S + ++ NRR++I Sbjct: 123 RAKAVQSILVSNGIPSSRIDVVS-YGESNPICTGHSAPCHAKNRRVEI 169 >gi|37704618|gb|AAR01581.1| OprF [Pseudomonas sp. MFY65] Length = 317 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272 V + + ++ FD S+ P + ++ + + + + ++ GHT Sbjct: 211 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 270 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + VL + GV R+ + G+ R Sbjct: 271 DSV---GPDAYNQKLSERRANAVKDVLTQQYGVESTRVDSV-GYGETRPVA 317 >gi|325275196|ref|ZP_08141163.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] gi|324099683|gb|EGB97562.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] Length = 309 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L I E + V + GH+D N LS RA + Sbjct: 179 FPGGGIELDDAAKARLDVILEYMKADPSVNHVELNGHSDN---SGNRLTNRDLSRRRALA 235 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 G+ +++I + ++ + NRR++I ++ Sbjct: 236 VADYFKAHGIKDEQI-TVRFHGERYPVAKNNTAANRARNRRVNIELDR 282 >gi|167741629|ref|ZP_02414403.1| hypothetical protein Bpse14_26418 [Burkholderia pseudomallei 14] Length = 472 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 259 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 316 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 317 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 376 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 377 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 408 >gi|148546371|ref|YP_001266473.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1] gi|148510429|gb|ABQ77289.1| OmpA/MotB domain protein [Pseudomonas putida F1] Length = 313 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L I + + V + GH+D N LS RA + Sbjct: 179 FPGGGIELDAAAKARLDVILDYMKADPTVNHVELNGHSDN---SGNRLTNRDLSRRRALA 235 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 +GV E++I + ++ + NRR++I ++ Sbjct: 236 VADYFKANGVPEEQI-TVRFHGERYPLAKNNSASNRARNRRVNIELDR 282 >gi|196233271|ref|ZP_03132117.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428] gi|196222742|gb|EDY17266.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428] Length = 564 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 6/108 (5%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + F S + ++ + L ++ I I G TD N L Sbjct: 457 KFRPVYFGFDSYAIGGGERSKIDEVAQFLKSASNTIIIAGFTDER---GTPEYNRGLGER 513 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 RA + + L++ G +I +S F +++ + NRR + Sbjct: 514 RAQAVREALIRDGADGSKIQTVS-FGAEMPADQGSNESAWAKNRRAEF 560 >gi|167827195|ref|ZP_02458666.1| hypothetical protein Bpseu9_26190 [Burkholderia pseudomallei 9] Length = 489 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 276 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 333 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 334 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 393 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 394 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 425 >gi|126725971|ref|ZP_01741813.1| OmpA family protein [Rhodobacterales bacterium HTCC2150] gi|126705175|gb|EBA04266.1| OmpA family protein [Rhodobacterales bacterium HTCC2150] Length = 224 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ LQ+ + E + GHTD R N RL L RA S Sbjct: 77 FAFNSAKLDGAAQATLQQQATWIRQFPEVRFRVYGHTD---LVGGNRFNKRLGLRRAQSV 133 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 + G+ DR+ ++ F + + + NRR Sbjct: 134 VNFFISQGIGRDRLEAVASFGEEQPIVFTQTEERQNRR 171 >gi|194337429|ref|YP_002019223.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309906|gb|ACF44606.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 337 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + PE+ L++I +L + + GHTD N LS RA + Sbjct: 235 FDPNKWDIKPESRPALKEIAILLNKQPTLRLHVVGHTDNV---GGYEANTVLSKRRAEAV 291 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L+K G+S R++ +G A+ ++ + NRR++++ Sbjct: 292 AASLVKDFGISALRLTA-NGAAYLAPVASNSTEAGRAKNRRVELV 335 >gi|67639335|ref|ZP_00438203.1| OmpA domain protein [Burkholderia mallei GB8 horse 4] gi|121597986|ref|YP_990337.1| hypothetical protein BMASAVP1_0732 [Burkholderia mallei SAVP1] gi|126447196|ref|YP_001079177.1| hypothetical protein BMA10247_A2001 [Burkholderia mallei NCTC 10247] gi|167003578|ref|ZP_02269364.1| OmpA family protein [Burkholderia mallei PRL-20] gi|254177240|ref|ZP_04883896.1| OmpA domain protein [Burkholderia mallei ATCC 10399] gi|254203187|ref|ZP_04909549.1| OmpA family protein [Burkholderia mallei FMH] gi|254208522|ref|ZP_04914871.1| OmpA family protein [Burkholderia mallei JHU] gi|121225784|gb|ABM49315.1| OmpA domain protein [Burkholderia mallei SAVP1] gi|126240050|gb|ABO03162.1| OmpA domain protein [Burkholderia mallei NCTC 10247] gi|147746232|gb|EDK53310.1| OmpA family protein [Burkholderia mallei FMH] gi|147751209|gb|EDK58277.1| OmpA family protein [Burkholderia mallei JHU] gi|160698280|gb|EDP88250.1| OmpA domain protein [Burkholderia mallei ATCC 10399] gi|238519871|gb|EEP83337.1| OmpA domain protein [Burkholderia mallei GB8 horse 4] gi|243060913|gb|EES43099.1| OmpA family protein [Burkholderia mallei PRL-20] Length = 552 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 339 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 396 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 397 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 456 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 457 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 488 >gi|288549451|ref|ZP_05967142.2| hypothetical protein ENTCAN_05522 [Enterobacter cancerogenus ATCC 35316] gi|288319143|gb|EFC58081.1| outer membrane protein A [Enterobacter cancerogenus ATCC 35316] Length = 358 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 230 KSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ ++I G + P + +RR++I Sbjct: 287 EKRAQSVVDYLVSKGIPANKI-SPRGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|239816213|ref|YP_002945123.1| hypothetical protein Vapar_3239 [Variovorax paradoxus S110] gi|239802790|gb|ACS19857.1| OmpA/MotB domain protein [Variovorax paradoxus S110] Length = 218 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 27/186 (14%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + L E +R + L + ++ L+ + Sbjct: 39 GMQLDLAAKLQAEVQQRQAETQRREALEQALAGPLAAGRVTLNNGRIGI----------- 87 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQ----KIGEVLAHSTEVISIRGHTDASPFRNI---- 280 + +F +S+ PE VL+ + L EV+ + G TD R Sbjct: 88 ---SGSVLFAFNSAELQPEGRQVLKSLAAPVASYLRARDEVLMVSGFTDDRQMRQSKDGN 144 Query: 281 --ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 DNW LS RA + + L++ GV + + F + ++ + NRR+++ Sbjct: 145 RPFADNWELSAQRALTVTRALIEEGVPSSSVFAAA-FGSEQAVASNADAEGRAKNRRVEM 203 Query: 337 LVEDRQ 342 RQ Sbjct: 204 APTPRQ 209 >gi|167818821|ref|ZP_02450501.1| hypothetical protein Bpse9_27048 [Burkholderia pseudomallei 91] Length = 490 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 277 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 334 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 335 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 394 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 395 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 426 >gi|170719951|ref|YP_001747639.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619] gi|169757954|gb|ACA71270.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 163 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 7/113 (6%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287 D +F ++ ++++IG+ L + + + GH DA A N +L Sbjct: 52 FDLSGKVLFGSDVDSLNGQSQAIVERIGKALLGVGIQGVRVDGHADA---SGKAAYNQQL 108 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 S RA+S +VL+ G+ I G + + + NRR+ I+V Sbjct: 109 SERRAHSVAKVLIGIGMPTQNIQT-RGLGSTQPVADNRTSLGRTENRRVSIVV 160 >gi|53721567|ref|YP_110552.1| hypothetical protein BPSS0531 [Burkholderia pseudomallei K96243] gi|126442377|ref|YP_001061803.1| hypothetical protein BURPS668_A0804 [Burkholderia pseudomallei 668] gi|126457957|ref|YP_001074752.1| hypothetical protein BURPS1106A_A0716 [Burkholderia pseudomallei 1106a] gi|134283082|ref|ZP_01769784.1| ompA family protein [Burkholderia pseudomallei 305] gi|167905639|ref|ZP_02492844.1| hypothetical protein BpseN_25596 [Burkholderia pseudomallei NCTC 13177] gi|167921862|ref|ZP_02508953.1| hypothetical protein BpseBC_25138 [Burkholderia pseudomallei BCC215] gi|217424539|ref|ZP_03456037.1| type IV/VI secretion system protein, DotU/OmpA family protein [Burkholderia pseudomallei 576] gi|226196513|ref|ZP_03792094.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9] gi|242312248|ref|ZP_04811265.1| OmpA family protein [Burkholderia pseudomallei 1106b] gi|254185465|ref|ZP_04892053.1| ompA family protein [Burkholderia pseudomallei 1655] gi|254296659|ref|ZP_04964113.1| ompA family protein [Burkholderia pseudomallei 406e] gi|52211981|emb|CAH37988.1| OmpA-family membrane protein [Burkholderia pseudomallei K96243] gi|126221868|gb|ABN85373.1| type IV/VI secretion system protein, DotU/OmpA family protein [Burkholderia pseudomallei 668] gi|126231725|gb|ABN95138.1| OmpA family protein [Burkholderia pseudomallei 1106a] gi|134245730|gb|EBA45822.1| ompA family protein [Burkholderia pseudomallei 305] gi|157806733|gb|EDO83903.1| ompA family protein [Burkholderia pseudomallei 406e] gi|184209700|gb|EDU06743.1| ompA family protein [Burkholderia pseudomallei 1655] gi|217392463|gb|EEC32487.1| type IV/VI secretion system protein, DotU/OmpA family protein [Burkholderia pseudomallei 576] gi|225931389|gb|EEH27395.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9] gi|242135487|gb|EES21890.1| OmpA family protein [Burkholderia pseudomallei 1106b] Length = 552 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 339 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 396 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 397 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 456 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 457 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 488 >gi|198275312|ref|ZP_03207843.1| hypothetical protein BACPLE_01473 [Bacteroides plebeius DSM 17135] gi|198271895|gb|EDY96165.1| hypothetical protein BACPLE_01473 [Bacteroides plebeius DSM 17135] Length = 238 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 8/154 (5%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 KK+ + + + + S+++ + + Sbjct: 73 KKMDKAAAQAEQIEGAQVEQVTDNNGLQAVKVTFDSGILFNTSSATLSSSAKSALSKFAN 132 Query: 257 EVLAHSTEVIS-IRGHTDASPFRNIARD-----NWRLSLDRAYSAYQVLMKSGVSEDRIS 310 VL + ++ I G+TD + ++N + N LS +RA S L+ G S +I Sbjct: 133 NVLNQNKDMDVAIYGYTDNTGWKNSTAEQSRQKNLDLSQERAQSVSSYLLACGASSSQIK 192 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 ++G + NRR+++ + Q Sbjct: 193 SVTGMGEENPVADNSTAAGRQENRRVEVYMYASQ 226 >gi|254187351|ref|ZP_04893865.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] gi|157935033|gb|EDO90703.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] Length = 571 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 358 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 415 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 416 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 475 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 476 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 507 >gi|76819156|ref|YP_337240.1| hypothetical protein BURPS1710b_A2089 [Burkholderia pseudomallei 1710b] gi|237509287|ref|ZP_04522002.1| type IV / VI secretion system protein, DotU family [Burkholderia pseudomallei MSHR346] gi|254198855|ref|ZP_04905273.1| ompA family protein [Burkholderia pseudomallei S13] gi|254264296|ref|ZP_04955161.1| ompA family protein [Burkholderia pseudomallei 1710a] gi|76583629|gb|ABA53103.1| OmpA domain protein [Burkholderia pseudomallei 1710b] gi|169657027|gb|EDS88421.1| ompA family protein [Burkholderia pseudomallei S13] gi|235001492|gb|EEP50916.1| type IV / VI secretion system protein, DotU family [Burkholderia pseudomallei MSHR346] gi|254215298|gb|EET04683.1| ompA family protein [Burkholderia pseudomallei 1710a] Length = 571 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 358 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 415 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 416 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 475 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 476 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 507 >gi|53716506|ref|YP_105228.1| hypothetical protein BMAA0453 [Burkholderia mallei ATCC 23344] gi|52422476|gb|AAU46046.1| OmpA domain protein [Burkholderia mallei ATCC 23344] Length = 571 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 358 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 415 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 416 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 475 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 476 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 507 >gi|84687704|ref|ZP_01015577.1| OmpA/MotB family protein [Maritimibacter alkaliphilus HTCC2654] gi|84664287|gb|EAQ10778.1| OmpA/MotB family protein [Rhodobacterales bacterium HTCC2654] Length = 165 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + +F S P+ +L + + L +T I GH D N L R Sbjct: 55 DRVLFMVDQSTLSPQAQGILDQQAQWLNSNTAYSAIIEGHADEQ---GTREYNVALGARR 111 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A S L++ GV+ R+ +S + R + + NRR ++ G Sbjct: 112 ASSVQSYLIERGVAPGRLKTVS-YGKERPLAICSDESCYQQNRRAVTVLTTGAG 164 >gi|188534230|ref|YP_001908027.1| outer membrane protein A [Erwinia tasmaniensis Et1/99] gi|188029272|emb|CAO97149.1| Outer membrane protein A [Erwinia tasmaniensis Et1/99] Length = 355 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L++ + + G+TD + N +LS Sbjct: 227 KSDVLFTFNKASLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRI---GSEQYNQKLS 283 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337 RA S L+ G+ +IS G + D + + +RR++I Sbjct: 284 EKRAQSVVDYLVSKGIPSSKISA-RGEGKSNPVTGNTCDSVKARKALIDCLGPDRRVEIE 342 Query: 338 VED 340 V+ Sbjct: 343 VKG 345 >gi|294850947|ref|ZP_06791623.1| outer membrane lipoprotein omp16 [Brucella sp. NVSL 07-0026] gi|294821590|gb|EFG38586.1| outer membrane lipoprotein omp16 [Brucella sp. NVSL 07-0026] Length = 168 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS+ + L K + L + I+I GH D N L R Sbjct: 59 DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A + L GV +R+ IS + + R +D S NRR + V + G Sbjct: 116 ATATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRRA-VTVLNGAG 167 >gi|163738854|ref|ZP_02146267.1| OmpA/MotB [Phaeobacter gallaeciensis BS107] gi|163741898|ref|ZP_02149288.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10] gi|161385071|gb|EDQ09450.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10] gi|161387659|gb|EDQ12015.1| OmpA/MotB [Phaeobacter gallaeciensis BS107] Length = 636 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 78/267 (29%), Gaps = 10/267 (3%) Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 D PPE ++ + + + L+ S++ + +N + Sbjct: 342 PEPETEDGNGPPEFTATLSPEGQVQLRGRISDEALRQISSSYAQARFGSQNVYSATRVVE 401 Query: 139 Q-SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + E L + + + +A +L D Sbjct: 402 DLPADWPVRVLAGLEALSHLQRGAVSVTPDSLSLSGMSHREDAPSEIAKLLSAKLGDAES 461 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + K + E + + + F+ S+ + L +I + Sbjct: 462 YELNVTYEAPPEPADKPMSPELCEAELA--AVQTVSKITFEPGSATVAAGSRDTLDQIAD 519 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 +LA V I+GHTD+ N LS RA S L + + G+ Sbjct: 520 ILARCDGVRLEIQGHTDSQ---GREEMNQTLSQSRAQSVLNELRGRRLVTSSFTA-KGYG 575 Query: 317 HHRLKIASDPMNSA--NRRIDILVEDR 341 ++D + NRRI+ + Sbjct: 576 ESTPIASNDTEDGREANRRIEFRLIRP 602 >gi|90426219|ref|YP_534589.1| OmpA/MotB [Rhodopseudomonas palustris BisB18] gi|90108233|gb|ABD90270.1| OmpA/MotB [Rhodopseudomonas palustris BisB18] Length = 166 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + P+ I L K + L +I GH D N L R Sbjct: 58 DRVFFESDQTDLSPQAIATLDKQAQWLQSYNRYSFTIEGHADER---GTREYNIALGARR 114 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A S L G+ R+ IS + R +D S NRR Sbjct: 115 AQSVRTYLTSRGIDSSRMRTIS-YGKERPVAVCNDISCWSQNRR 157 >gi|37704610|gb|AAR01577.1| OprF [Pseudomonas sp. MFY57] Length = 316 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272 V + + ++ FD S+ P + ++ + + + + ++ GHT Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHT 269 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL + GV R+ + G+ R Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSV-GYGETRPVA 316 >gi|284032832|ref|YP_003382763.1| OmpA/MotB domain-containing protein [Kribbella flavida DSM 17836] gi|283812125|gb|ADB33964.1| OmpA/MotB domain protein [Kribbella flavida DSM 17836] Length = 327 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 48/130 (36%), Gaps = 7/130 (5%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270 + ++ + ++ +F ++I ++ + ++ +L + + G Sbjct: 201 KPPLSEACQTFESRLAQLTSQHKIIFLSGTAIVNEKSRGSVVRVAALLRTCGTARVELAG 260 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 HTD + LS RA + L++ GV RI G+ ++ Sbjct: 261 HTDNL---GDPSTSLPLSQRRADAVKATLVRLGVPAGRIIS-RGYGEFEPVASNRTSAGR 316 Query: 331 --NRRIDILV 338 NRR++I V Sbjct: 317 IANRRVEIRV 326 >gi|229528510|ref|ZP_04417901.1| protein F-related protein [Vibrio cholerae 12129(1)] gi|229334872|gb|EEO00358.1| protein F-related protein [Vibrio cholerae 12129(1)] Length = 204 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 61/153 (39%), Gaps = 10/153 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246 ++ + + +++ + +L + ++ +I NT F+ S+ Sbjct: 49 QKNTSVMPNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 108 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L + LA + + + GHTD + + N +L+ RA + L++S V Sbjct: 109 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVV 165 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++ I GF + + + NRR++I Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197 >gi|26987823|ref|NP_743248.1| OmpA family outer membrane protein [Pseudomonas putida KT2440] gi|24982522|gb|AAN66712.1|AE016299_8 outer membrane protein, OmpA family [Pseudomonas putida KT2440] Length = 317 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L I + + V + GH+D N LS RA + Sbjct: 183 FPGGGIELDAAAKARLDVILDYMKADPTVNHVELNGHSDN---SGNRLTNRDLSRRRALA 239 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 +GV E++I + ++ + NRR++I ++ Sbjct: 240 VADYFKANGVPEEQI-TVRFHGERYPLAKNNSASNRARNRRVNIELDR 286 >gi|254440083|ref|ZP_05053577.1| OmpA family protein [Octadecabacter antarcticus 307] gi|198255529|gb|EDY79843.1| OmpA family protein [Octadecabacter antarcticus 307] Length = 720 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 9/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRL 287 +R F SS +I + + V+ + I GHTD+ N L Sbjct: 603 ERGQIEFLSSSVRLDATSIRTINALAAVILPCVAADLTLDIGGHTDS---SGDEPTNKAL 659 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 S DRA + L+ GV + ++ GF + ++ +ANRR DI Sbjct: 660 SQDRANAVRAALIARGVPDVAMTAF-GFGQTQPIADNETPEGRAANRRTDIT 710 >gi|109898397|ref|YP_661652.1| OmpA/MotB [Pseudoalteromonas atlantica T6c] gi|109700678|gb|ABG40598.1| OmpA/MotB [Pseudoalteromonas atlantica T6c] Length = 366 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 MFD +SS +Q+ + + ++ G+ A N +LS++RA + Sbjct: 254 MFDNNSSKLKNIDSASVQEFVDFMRRYGTTNAVIEGYASA---PGTDAYNMKLSVERAQN 310 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340 Q L+ ++ R+ + G+ +L +++ + NRRI+ V Sbjct: 311 VRQYLVAQYNIAGSRLEAV-GYGETKLLDSANTREAHQKNRRIEAYVTA 358 >gi|189463929|ref|ZP_03012714.1| hypothetical protein BACINT_00263 [Bacteroides intestinalis DSM 17393] gi|189438502|gb|EDV07487.1| hypothetical protein BACINT_00263 [Bacteroides intestinalis DSM 17393] Length = 666 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 59/167 (35%), Gaps = 34/167 (20%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 L+ +++ + +E I+ ++ + PE+ V L ++ ++L + Sbjct: 500 EELMTEDVNEDRHYELEFPLSSITRPVLIENIFYEFDRADLTPESTVALDELIQLLNDNP 559 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I + H D ++ N RLS RA S + L+K G+ +R++ G+ + K Sbjct: 560 NVTIELSAHCD---YKGNDDYNLRLSQRRAESVVRYLIKGGIDSERLTP-KGYGEQQPKT 615 Query: 323 ASD---------------PMN--------------SANRRIDILVED 340 ++ + NRR + V Sbjct: 616 VTNFTLKSAPFLKVGDVLTEEFIKNLPLEQQEICNAINRRTEFKVLR 662 >gi|225628264|ref|ZP_03786298.1| peptidoglycan-associated lipoprotein [Brucella ceti str. Cudo] gi|225616110|gb|EEH13158.1| peptidoglycan-associated lipoprotein [Brucella ceti str. Cudo] Length = 183 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS+ + L K + L + I+I GH D N L R Sbjct: 74 DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 130 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A + L GV +R+ IS + + R +D S NRR + V + G Sbjct: 131 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRRA-VTVLNGAG 182 >gi|87118960|ref|ZP_01074858.1| OmpF [Marinomonas sp. MED121] gi|86165351|gb|EAQ66618.1| OmpF [Marinomonas sp. MED121] Length = 192 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 8/102 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + + L K+G+ L + I GHTD+ DN RLS +RA + Sbjct: 64 FHTNKFELEDNELKGLLKLGKFLQKHQSSDVFIEGHTDSM---GDDEDNLRLSQNRANAI 120 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 Q L+ +S DRI I G ++ ++ + NRR+ Sbjct: 121 KQALVTKFLISSDRIIAI-GHGENQPIANNETEYGRAVNRRV 161 >gi|86132613|ref|ZP_01051206.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85816855|gb|EAQ38040.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 650 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289 N FD + S P+ + L K+ + E+ I++R HTD+ N LS Sbjct: 536 NLNPIYFDYNKSDIRPDAALELTKVISAMKQVPEMVINVRSHTDSR---GKDSYNLSLSD 592 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 RA S ++ G++ +RI +G+ +L ++ + NRR + +V + Sbjct: 593 RRAKSTVAYIISRGINAERI-SGNGYGETQLVNGCGNNSDCTEEQHQLNRRSEFIVVN 649 >gi|152990958|ref|YP_001356680.1| peptidoglycan-associated lipoprotein [Nitratiruptor sp. SB155-2] gi|151422819|dbj|BAF70323.1| peptidoglycan-associated lipoprotein [Nitratiruptor sp. SB155-2] Length = 182 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 9/116 (7%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDN 284 I Q FD P+ ++ ++ I + G+ D N Sbjct: 69 IEAQSKKIYFDFDKYNIRPDQQPRVEFDAKLFNSDEAKPFNIKVEGNCDEW---GTDEYN 125 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 + L L RA S L GV++DR++ IS + + NRR++ + Sbjct: 126 YALGLKRAKSVRDALAARGVAKDRMTLIS-YGESNPVCTEHTKECWAKNRRVEFEL 180 >gi|305665788|ref|YP_003862075.1| OmpA family protein [Maribacter sp. HTCC2170] gi|88710554|gb|EAR02786.1| OmpA family protein [Maribacter sp. HTCC2170] Length = 827 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 55/158 (34%), Gaps = 16/158 (10%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIID-----QRNTPMFDKSSSIPLPETIV 250 + DN V R +I++ D + FD S + Sbjct: 672 QDYFDEEVGVSTKDNEVVNTEVALRRLKEMIAVEDGIRKLKTEMIYFDFDKSYIRKDASE 731 Query: 251 VLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L K+ +V+ + I I HTD+ N LS RA S ++ G+ +RI Sbjct: 732 ELDKLVQVMTEYPTMVIKIESHTDSR---GARVYNKYLSEKRAKSTRAYIISKGIDANRI 788 Query: 310 SKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 G+ RL S+ + NRR + ++ + Sbjct: 789 QSAIGYGEERLINGCDGSVRCSEANHLLNRRSEFIIVE 826 >gi|307943350|ref|ZP_07658694.1| OmpA/MotB domain-containing protein [Roseibium sp. TrichSKD4] gi|307772980|gb|EFO32197.1| OmpA/MotB domain-containing protein [Roseibium sp. TrichSKD4] Length = 192 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 8/156 (5%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + +++ A ++ + L + FD S Sbjct: 37 QGAQAKVEVSADELRKAAFDNIKKYPGDNAAEVLPLALKLNQLRQFNVEITFDFDSDRIR 96 Query: 246 PETIVVLQKIGEVLAHSTEV---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 PE+ + I + L + GHTDA + N +LS RA + + L+ + Sbjct: 97 PESYETVGVIADALHTPYLWGAKFFVVGHTDA---KGDREYNIKLSQRRADAIREALITT 153 Query: 303 -GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 V DR+ + G +L+ +P NRR+ ++ Sbjct: 154 FRVPADRLEAV-GLGEEQLRDPENPDAEVNRRVQLI 188 >gi|213964024|ref|ZP_03392268.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno] gi|213953356|gb|EEB64694.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno] Length = 635 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 FD + S P+ V L KI EV+ ++ IR HTD+ N LS Sbjct: 520 DIKEIYFDLNKSDIRPDAAVELAKIVEVMKEYPKMKIDIRSHTDSR---ASDAYNLALSD 576 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 RA S + ++K G+ R++ G+ RL ++ + ANRR + +V + Sbjct: 577 RRAKSTLEWIVKQGIERKRLTA-KGYGETRLVNGCSNGVPCTEEEHQANRRSEFIVVN 633 >gi|325955085|ref|YP_004238745.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] gi|323437703|gb|ADX68167.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] Length = 474 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 46/143 (32%), Gaps = 13/143 (9%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + G + V + I + + FD S + L EV+ Sbjct: 332 IPGPPTNLGCPEVETVVSADQIAGLLTETIQGIEFDYDSDKIRQVSYSKLDNAAEVIMKH 391 Query: 263 TEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 + GHTDA N LS RA S + L+ GV+ ++ I G LK Sbjct: 392 PNYNFWVEGHTDA---AGPDAYNQNLSERRAASVVRYLVNKGVNSAQLFPI-GKGESELK 447 Query: 322 IA------SDPMNS--ANRRIDI 336 + P NRR+ Sbjct: 448 HPECNPTTNCPAWKNLENRRVVF 470 >gi|294139328|ref|YP_003555306.1| OmpA family protein [Shewanella violacea DSS12] gi|293325797|dbj|BAJ00528.1| OmpA family protein [Shewanella violacea DSS12] Length = 277 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 8/146 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + + I + +F S L E V++ + L Sbjct: 135 KLVEETSLVDDRVSIDLHGLTDKIAQTGHVALEGLLFKFDSDEMLLEATPVVEVVATYLK 194 Query: 261 HST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHH 318 + + GHTD N LS RA + + L+ V + ++ G + Sbjct: 195 SHPKQSFYVIGHTDDL---GKQSYNQVLSNKRAKAVVKQLLSVYKVPKSQLEA-KGIGEY 250 Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342 + NRR+++++ Sbjct: 251 SPVANNSNDAGQKLNRRVELVLRSDN 276 >gi|196231290|ref|ZP_03130149.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428] gi|196224626|gb|EDY19137.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428] Length = 316 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 88/281 (31%), Gaps = 12/281 (4%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 F F K + P + + I + + ++ + Sbjct: 38 FFNFKKLENFGYTTVDRPAITPIKMVRVNITEPPAAESKTETTPKTPVKPIKIEETKPFA 97 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + ++ + ++ + ++ + + L + + + Sbjct: 98 DEVDLKPSAPDVSPLVPAKPKNLDLSGFETPASSVAALEKQLSAKPGAILDQSLAVGRQP 157 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 K +L K + + + I + +F+ + LP+ Sbjct: 158 KIKLPAGPKGGEGGVGSDGSIPGRASLNDALGNVGAFNNKPIAMQGGALFEWGKAELLPQ 217 Query: 248 TIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 I LQK+ +++ + I GHTD + N LS RA S L+ + G+ Sbjct: 218 AIQNLQKLAQLIRLNPKATFIISGHTDHT---GTHEGNLILSQQRADSVRDWLVANLGID 274 Query: 306 EDRISKISGFAHHR--L-KIASDP--MNSANRRIDILVEDR 341 RI+ + G A + NRR++I+++ R Sbjct: 275 PMRITTV-GKADDEAFPNLGPDKSIEEQAPNRRVEIVIKTR 314 >gi|194333585|ref|YP_002015445.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii DSM 271] gi|194311403|gb|ACF45798.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii DSM 271] Length = 153 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289 Q + + SS+ + L++ + + + E + + GH D N L Sbjct: 46 QLDDVFYAFDSSVLDMASQNQLKENAQWMMDNPEAAVIVEGHCDER---GTNEYNIALGE 102 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 RA SA L+ GV R+ +S + R + + NRR +V+ Sbjct: 103 RRADSAKSYLVNLGVDASRMQTVS-YGEERPFDPGHDEAAWAKNRRAHFVVQ 153 >gi|119898879|ref|YP_934092.1| outer membrane protein A [Azoarcus sp. BH72] gi|119671292|emb|CAL95205.1| outer membrane protein A precursor [Azoarcus sp. BH72] Length = 238 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 16/119 (13%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ PE L + + + GHTD N +LS RA + Sbjct: 124 LFDFDKAVLKPEGRTKLDDLAAKAKGIKLEVILAVGHTDRL---GSDSYNQKLSERRAAA 180 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +R+ G + + + N RR+++ V + Sbjct: 181 VKTYLVSKGVEANRVYT-EGKGEKQPVTGNKCDSVKNRKALIECLQPDRRVEVEVIGSK 238 >gi|238750181|ref|ZP_04611684.1| OmpA domain protein [Yersinia rohdei ATCC 43380] gi|238711725|gb|EEQ03940.1| OmpA domain protein [Yersinia rohdei ATCC 43380] Length = 560 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 8/137 (5%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTEVIS- 267 ++K V + + R P+FD +SS P +T +L+ + +L + + Sbjct: 421 LLKRVNHKIETYTNVPKFSSARMAPLFDSNSSKLKPNKQTNDILKSLLYLLEKNPDTKVL 480 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 I GH+D + N +LS RA L+K+ + G +++ Sbjct: 481 IIGHSDNT---GSPSFNMKLSEQRAQVVGDWLIKNSSIPVNNLIVRGKGALEPIASNNTK 537 Query: 327 -MNSANRRIDILVEDRQ 342 NRR+++L+ Q Sbjct: 538 IGQDQNRRVEVLLLPTQ 554 >gi|148368|gb|AAA24807.1| outer membrane protein II [Enterobacter aerogenes] Length = 238 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 119 KSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 175 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ ++I G + +A +RR++I Sbjct: 176 EKRAQSVVDYLVSKGIPANKI-SPRGMGESNPVTGSTCDNVKPRAALIDCLAPDRRVEIE 234 Query: 338 VED 340 V+ Sbjct: 235 VKG 237 >gi|302337004|ref|YP_003802210.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293] gi|301634189|gb|ADK79616.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293] Length = 405 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 12/161 (7%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 ++ + + + L +A+N + G++IS+ F S++ Sbjct: 252 ATARQVRSRSMDKETVKDELERRIAENGIPDAGVRVGDDGVIISL----ENIQFKADSAV 307 Query: 244 PLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 PLP + L+++ +L + + GHT A LSL+RA + L Sbjct: 308 PLPGEMDKLKRVVSLLKLYPDRDILVTGHT---ALAGTAEGRMALSLERARTVAAFLKDE 364 Query: 303 -GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340 + +DR+ I G +D NRR++I + + Sbjct: 365 LNIDDDRLM-IEGKGAGAPVAPNDTEEGKRKNRRVEITILE 404 >gi|255262798|ref|ZP_05342140.1| OmpA domain protein [Thalassiobium sp. R2A62] gi|255105133|gb|EET47807.1| OmpA domain protein [Thalassiobium sp. R2A62] Length = 176 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 8/109 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + +F +S L L +++ + GH D N L R Sbjct: 66 DRVLFTVDTSSLTAAGRSTLDGQATWLLTNSDYLAVVEGHADEQ---GTREYNLALGARR 122 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR-IDIL 337 A + + L+ GV +R+ +S + R + + + NRR + I+ Sbjct: 123 ANAVREYLISRGVPSNRLRTVS-YGKERPTEICSEEACYAKNRRAVTII 170 >gi|189424872|ref|YP_001952049.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ] gi|189421131|gb|ACD95529.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ] Length = 185 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 8/110 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLD 290 T FD S ++ +L K + L I I GH D N L Sbjct: 78 QTVYFDFDRSDLRQDSRDMLTKNAQALMKDLVDSKIKIEGHCDER---GSDEYNLALGDR 134 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338 RA + L+ GV +DRIS +S F + + + + S NRR + ++ Sbjct: 135 RAKAVATYLITLGVKQDRISTVS-FGKEKPAMQGSDETAWSKNRRAEFVI 183 >gi|183222022|ref|YP_001840018.1| hypothetical protein LEPBI_I2664 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912089|ref|YP_001963644.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776765|gb|ABZ95066.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780444|gb|ABZ98742.1| Putative outer membrane protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 618 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 N F SS E+ L ++ +L +T + I GHTD N +LSL+ Sbjct: 509 MNNLFFAFRSSEFAKESEPELDRLAGILKKTTNLKVLIEGHTDNV---GTKSANQKLSLE 565 Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 RA S L K + + RI + G + NRR+ + + Sbjct: 566 RANSVAFYLKSKHKIEDSRI-SVVGLGPSNPIAENGSEEGRAVNRRVVFKILE 617 >gi|123442919|ref|YP_001006894.1| hypothetical protein YE2703 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089880|emb|CAL12736.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 556 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 8/134 (5%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVIS 267 ++ + + + + + PMFD +S P +L H + Sbjct: 417 LLNKINHQIESYQDIPAFSSTQMAPMFDSNSIKLKPNAQTNETLASLLLLVEQHQGRKVL 476 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 I GH+D + A N +S RA L+K+ I G ++D Sbjct: 477 IIGHSDNT---GSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVASNDTP 533 Query: 328 NS--ANRRIDILVE 339 NRR+++L+ Sbjct: 534 AGQDQNRRVEVLLL 547 >gi|17986623|ref|NP_539257.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1 str. 16M] gi|23502553|ref|NP_698680.1| Pal family lipoprotein [Brucella suis 1330] gi|62290567|ref|YP_222360.1| Pal family lipoprotein [Brucella abortus bv. 1 str. 9-941] gi|82700483|ref|YP_415057.1| outer membrane protein MotY [Brucella melitensis biovar Abortus 2308] gi|148560405|ref|YP_001259548.1| outer membrane lipoprotein Omp16 [Brucella ovis ATCC 25840] gi|161619624|ref|YP_001593511.1| peptidoglycan-associated lipoprotein [Brucella canis ATCC 23365] gi|163845274|ref|YP_001622929.1| peptidoglycan-associated lipoprotein [Brucella suis ATCC 23445] gi|189024786|ref|YP_001935554.1| outer membrane protein [Brucella abortus S19] gi|225853150|ref|YP_002733383.1| peptidoglycan-associated lipoprotein [Brucella melitensis ATCC 23457] gi|237816073|ref|ZP_04595069.1| peptidoglycan-associated lipoprotein [Brucella abortus str. 2308 A] gi|254694357|ref|ZP_05156185.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 3 str. Tulya] gi|254698015|ref|ZP_05159843.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 2 str. 86/8/59] gi|254703474|ref|ZP_05165302.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 3 str. 686] gi|254708437|ref|ZP_05170265.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis M163/99/10] gi|254708710|ref|ZP_05170521.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis B2/94] gi|254719698|ref|ZP_05181509.1| peptidoglycan-associated lipoprotein [Brucella sp. 83/13] gi|254730899|ref|ZP_05189477.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 4 str. 292] gi|256030236|ref|ZP_05443850.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis M292/94/1] gi|256045306|ref|ZP_05448200.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1 str. Rev.1] gi|256061733|ref|ZP_05451870.1| peptidoglycan-associated lipoprotein [Brucella neotomae 5K33] gi|256114264|ref|ZP_05455009.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 3 str. Ether] gi|256160411|ref|ZP_05458100.1| peptidoglycan-associated lipoprotein [Brucella ceti M490/95/1] gi|256255617|ref|ZP_05461153.1| peptidoglycan-associated lipoprotein [Brucella ceti B1/94] gi|256263357|ref|ZP_05465889.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 2 str. 63/9] gi|256370104|ref|YP_003107615.1| lipoprotein, Pal family [Brucella microti CCM 4915] gi|260167911|ref|ZP_05754722.1| lipoprotein, Pal family [Brucella sp. F5/99] gi|260547188|ref|ZP_05822926.1| peptidoglycan-associated lipoprotein [Brucella abortus NCTC 8038] gi|260565803|ref|ZP_05836286.1| outer membrane lipoprotein omp16 [Brucella melitensis bv. 1 str. 16M] gi|260568781|ref|ZP_05839249.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 4 str. 40] gi|260758616|ref|ZP_05870964.1| outer membrane lipoprotein [Brucella abortus bv. 4 str. 292] gi|260762448|ref|ZP_05874785.1| outer membrane lipoprotein [Brucella abortus bv. 2 str. 86/8/59] gi|261214665|ref|ZP_05928946.1| outer membrane lipoprotein [Brucella abortus bv. 3 str. Tulya] gi|261222819|ref|ZP_05937100.1| peptidoglycan-associated lipoprotein [Brucella ceti B1/94] gi|261315938|ref|ZP_05955135.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis M163/99/10] gi|261316200|ref|ZP_05955397.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis B2/94] gi|261325736|ref|ZP_05964933.1| peptidoglycan-associated lipoprotein [Brucella neotomae 5K33] gi|261754103|ref|ZP_05997812.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 3 str. 686] gi|261757348|ref|ZP_06001057.1| peptidoglycan-associated lipoprotein [Brucella sp. F5/99] gi|265984712|ref|ZP_06097447.1| peptidoglycan-associated lipoprotein [Brucella sp. 83/13] gi|265987263|ref|ZP_06099820.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis M292/94/1] gi|265991730|ref|ZP_06104287.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1 str. Rev.1] gi|265995567|ref|ZP_06108124.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 3 str. Ether] gi|265998778|ref|ZP_06111335.1| peptidoglycan-associated lipoprotein [Brucella ceti M490/95/1] gi|306837843|ref|ZP_07470705.1| peptidoglycan-associated lipoprotein [Brucella sp. NF 2653] gi|306841414|ref|ZP_07474116.1| peptidoglycan-associated lipoprotein [Brucella sp. BO2] gi|61229452|sp|P0A3S7|OMP16_BRUME RecName: Full=Outer membrane lipoprotein omp16; AltName: Full=16.5 kDa minor OMP; Short=16 kDa OMP; AltName: Full=Minor outer membrane protein omp16; Flags: Precursor gi|61229453|sp|P0A3S8|OMP16_BRUSU RecName: Full=Outer membrane lipoprotein omp16; AltName: Full=16.5 kDa minor OMP; Short=16 kDa OMP; AltName: Full=Minor outer membrane protein omp16; Flags: Precursor gi|61229455|sp|P0A3S9|OMP16_BRUAB RecName: Full=Outer membrane lipoprotein omp16; AltName: Full=16.5 kDa minor OMP; Short=16 kDa OMP; AltName: Full=Minor outer membrane protein omp16; Flags: Precursor gi|13898977|gb|AAK48919.1|AF358662_6 Pal protein [Brucella melitensis] gi|538293|gb|AAA59360.1| Omp16 [Brucella abortus bv. 1] gi|17982237|gb|AAL51521.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1 str. 16M] gi|23348553|gb|AAN30595.1| lipoprotein, Pal family [Brucella suis 1330] gi|62196699|gb|AAX74999.1| lipoprotein, Pal family [Brucella abortus bv. 1 str. 9-941] gi|82616584|emb|CAJ11663.1| MotY protein:Bacterial outer membrane protein:OmpA/MotB domain [Brucella melitensis biovar Abortus 2308] gi|148371662|gb|ABQ61641.1| outer membrane lipoprotein Omp16 (Minor outer membraneprotein omp16) (16 kDa OMP) (16.5 kDa minor OMP) [Brucella ovis ATCC 25840] gi|161336435|gb|ABX62740.1| peptidoglycan-associated lipoprotein [Brucella canis ATCC 23365] gi|163675997|gb|ABY40107.1| peptidoglycan-associated lipoprotein [Brucella suis ATCC 23445] gi|189020358|gb|ACD73080.1| Bacterial outer membrane protein [Brucella abortus S19] gi|225641515|gb|ACO01429.1| peptidoglycan-associated lipoprotein [Brucella melitensis ATCC 23457] gi|237788736|gb|EEP62948.1| peptidoglycan-associated lipoprotein [Brucella abortus str. 2308 A] gi|256000267|gb|ACU48666.1| lipoprotein, Pal family [Brucella microti CCM 4915] gi|260095553|gb|EEW79431.1| peptidoglycan-associated lipoprotein [Brucella abortus NCTC 8038] gi|260151176|gb|EEW86271.1| outer membrane lipoprotein omp16 [Brucella melitensis bv. 1 str. 16M] gi|260154165|gb|EEW89247.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 4 str. 40] gi|260668934|gb|EEX55874.1| outer membrane lipoprotein [Brucella abortus bv. 4 str. 292] gi|260672874|gb|EEX59695.1| outer membrane lipoprotein [Brucella abortus bv. 2 str. 86/8/59] gi|260916272|gb|EEX83133.1| outer membrane lipoprotein [Brucella abortus bv. 3 str. Tulya] gi|260921403|gb|EEX88056.1| peptidoglycan-associated lipoprotein [Brucella ceti B1/94] gi|261295423|gb|EEX98919.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis B2/94] gi|261301716|gb|EEY05213.1| peptidoglycan-associated lipoprotein [Brucella neotomae 5K33] gi|261304964|gb|EEY08461.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis M163/99/10] gi|261737332|gb|EEY25328.1| peptidoglycan-associated lipoprotein [Brucella sp. F5/99] gi|261743856|gb|EEY31782.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 3 str. 686] gi|262553467|gb|EEZ09236.1| peptidoglycan-associated lipoprotein [Brucella ceti M490/95/1] gi|262766851|gb|EEZ12469.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 3 str. Ether] gi|263002686|gb|EEZ15089.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1 str. Rev.1] gi|263093357|gb|EEZ17426.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 2 str. 63/9] gi|264659460|gb|EEZ29721.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis M292/94/1] gi|264663304|gb|EEZ33565.1| peptidoglycan-associated lipoprotein [Brucella sp. 83/13] gi|306288520|gb|EFM59872.1| peptidoglycan-associated lipoprotein [Brucella sp. BO2] gi|306407082|gb|EFM63299.1| peptidoglycan-associated lipoprotein [Brucella sp. NF 2653] gi|326409709|gb|ADZ66774.1| Bacterial outer membrane protein [Brucella melitensis M28] gi|326539416|gb|ADZ87631.1| peptidoglycan-associated lipoprotein [Brucella melitensis M5-90] Length = 168 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS+ + L K + L + I+I GH D N L R Sbjct: 59 DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A + L GV +R+ IS + + R +D S NRR + V + G Sbjct: 116 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADTCWSQNRRA-VTVLNGAG 167 >gi|297564278|ref|YP_003683251.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848727|gb|ADH70745.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 534 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 69/234 (29%), Gaps = 23/234 (9%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + G TN+ +Y + S + + ++ D + + Sbjct: 139 PVHDGVTNEYVRYFPRLPDEVRQVTFVGSGLGAMTGIPVVDVEEERADPQDPNGADHLTP 198 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + P + + S + + +IS+ Sbjct: 199 DDPPPSGENLTFANRRPDADAVADEGWVQSFVDSEI-------ASTTRDGDREIISLHSD 251 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS----IRGHTDASPFRNIARDNWRL 287 MF+ S E V+++ LA + + + GHTD+ N L Sbjct: 252 ---VMFEFDRSDLTSEAEDVVRRAATSLARNVDPDEPVITVIGHTDSI---GDDAYNDNL 305 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-----ASDPMNSANRRIDI 336 S+ RA S +L + + D ++ G H D + NRR++ Sbjct: 306 SVQRAESVRDLLAEE-LGTDYTLEVEGRGEHEPIAREGGPDDDEARARNRRVEF 358 >gi|313500575|gb|ADR61941.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1] Length = 162 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287 D +F ++ ++++IG+ L + + + GH D+ A N +L Sbjct: 51 YDLSGKVLFGSDLDSLNGQSQAIVERIGKALLGVGIQGVRVDGHADS---SGKAAYNQQL 107 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 S RA S + L+ G+ I G + + NRR+ I+V Sbjct: 108 SERRAQSVTKALVGVGMQAQNIQS-RGLGSSQPVADNRTSAGRTENRRVSIVV 159 >gi|254355979|ref|ZP_04972256.1| OmpA family protein [Burkholderia mallei 2002721280] gi|148024962|gb|EDK83131.1| OmpA family protein [Burkholderia mallei 2002721280] Length = 560 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 I+ TL + + +G L + + FD + + + ++++G Sbjct: 347 NIAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGA--FDVGKANVRADFMHNIERLGL 404 Query: 258 VLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE---------D 307 A + + GHTD+ P R DN LS RA + L K+ + Sbjct: 405 AFAPWPGDLEVIGHTDSRPIRTSEFPDNQALSEARARNVADELRKTALPGGARAPENAVQ 464 Query: 308 RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R + SG + + + NRR+D+L Sbjct: 465 RNIEYSGRGDAQPIDTAKTAAAYERNRRVDVL 496 >gi|160874266|ref|YP_001553582.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195] gi|160859788|gb|ABX48322.1| OmpA/MotB domain protein [Shewanella baltica OS195] gi|315266500|gb|ADT93353.1| OmpA/MotB domain protein [Shewanella baltica OS678] Length = 369 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 8/131 (6%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 V + + + F S++ ++++ L + E I GH Sbjct: 234 HKVDSVGCTIYENVKNKEDVGSIQFANDSAVVKKVFYKDIERLANYLNKNPEFTVEIAGH 293 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328 N LS RA + Q+L++ G+S+ R++ +G+ + +A D Sbjct: 294 ASNV---GKPEYNMVLSDKRADAVAQILVEKYGISQSRVTS-NGYGVTQPLVAGDSKEAY 349 Query: 329 SANRRIDILVE 339 +ANRRI+ +V Sbjct: 350 AANRRIEAIVT 360 >gi|114320567|ref|YP_742250.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226961|gb|ABI56760.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 326 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 8/109 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F +S+ LP++ L+ I E+++ + + + GHTD++ N LS++R Sbjct: 218 QNILFAVNSAEILPDSADALEAIAELMSEQPDLTLLVVGHTDST---GDYDYNLTLSMER 274 Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 A + + L + G+ DR+ G ++ + NRR++++ Sbjct: 275 AEAVVRWLQREHGIDGDRLQAA-GAGMMAPVTSNRTEAGRAENRRVELV 322 >gi|311280141|ref|YP_003942372.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1] gi|308749336|gb|ADO49088.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1] Length = 362 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N +LS Sbjct: 234 KSDVLFNFNKATLKPEGKQALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSEAYNQKLS 290 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ ++IS G + +A +RR++I Sbjct: 291 TQRAQSVVDYLVSKGIPANKISA-RGMGKSDPVTGSTCNNVKARAALIDCLAPDRRVEIE 349 Query: 338 VED 340 V+ Sbjct: 350 VKG 352 >gi|262277489|ref|ZP_06055282.1| OmpA family protein [alpha proteobacterium HIMB114] gi|262224592|gb|EEY75051.1| OmpA family protein [alpha proteobacterium HIMB114] Length = 155 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 36/112 (32%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + F + S + L K + S + + GH D N L R Sbjct: 49 PDRVFFATNKSGLHTASKSTLNKQAAYIKSSGISVVVEGHADER---GTREYNLALGERR 105 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A + LM GVS + + + R S NRR + V+ + Sbjct: 106 ANAVRDYLMSQGVSGSNV-TVISYGKERPVNPESSRLAWSQNRR-SVTVKAK 155 >gi|149914118|ref|ZP_01902649.1| OmpA family protein [Roseobacter sp. AzwK-3b] gi|149811637|gb|EDM71470.1| OmpA family protein [Roseobacter sp. AzwK-3b] Length = 181 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 10/103 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F S+ L + +I GHTD+ N LSL RA + Sbjct: 84 FATDSARLGHSARQNLANFFASTGAVS--YTIVGHTDSR---ASDEYNMDLSLRRANAVA 138 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 V +G RI+ + G K +++ +ANRR++IL Sbjct: 139 SVARSTG---ARIADVRGMGERAPKASNNTAAGMAANRRVEIL 178 >gi|78046418|ref|YP_362593.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034848|emb|CAJ22493.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 400 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 77/278 (27%), Gaps = 20/278 (7%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 K + + I+ + +D++ L + Sbjct: 131 LKADGSGTANFEGGLVNVNADGSGTINAIGEGGSGGALIDVQSDGGGTYNGPAGLISLDG 190 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK--- 189 + + SE R G + + + + P + Sbjct: 191 KGAGTWNSEKSGLVDNRGDGSGTWNGPRGLVTINADGSGTWNGPDGLVQNHGDGTGTVGT 250 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + + K + I++ D+ +FD S P+ Sbjct: 251 PPREVRMPPLPKVPPAGRFPPLQKFAPSGAPCGYL-ITLNDR---ILFDFDKSDIRPDAA 306 Query: 250 VVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 VL +G L T + + +RGHTDA + N LS RA + + Sbjct: 307 RVLDTLGAALTKVTAKDMQVRGHTDA---KGSDDYNQALSERRANAVLA--ALRARGAAQ 361 Query: 309 ISKISGFAHHRLKIAS------DP-MNSANRRIDILVE 339 + G+ + + +P NRR++I + Sbjct: 362 SANAKGYGESQPVAPNTLNGQDNPGGRQLNRRVEIFLR 399 >gi|323700000|ref|ZP_08111912.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132] gi|323459932|gb|EGB15797.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132] Length = 192 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ E+ +L I E + S+ +S+ GHTD + N+ LS+ RA Sbjct: 91 FHSDSTRLTDESKALLPDILESWRSRSSRDVSVVGHTDTL---GEKQYNYDLSVRRAEKV 147 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 +L+K G+ ED I +++ I + NRR+++LV Sbjct: 148 RDLLVKGGMPED-IIEMTSHGEENPLIPTPDGRSEPRNRRVEVLVR 192 >gi|229522237|ref|ZP_04411653.1| protein F-related protein [Vibrio cholerae TM 11079-80] gi|229340222|gb|EEO05228.1| protein F-related protein [Vibrio cholerae TM 11079-80] Length = 204 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246 ++ + + +++ + +L + ++ +I NT F+ S+ Sbjct: 49 QKNTSVMPNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFEIGSAKVSM 108 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L + LA + + + GHTD + + N +L+ RA + L++S V+ Sbjct: 109 ASKQWLDTVARFLAAESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVA 165 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++ I GF + + + NRR++I Sbjct: 166 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 197 >gi|126173969|ref|YP_001050118.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155] gi|153000261|ref|YP_001365942.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185] gi|160874894|ref|YP_001554210.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195] gi|217973710|ref|YP_002358461.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223] gi|304409838|ref|ZP_07391458.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|307304194|ref|ZP_07583947.1| OmpA/MotB domain protein [Shewanella baltica BA175] gi|125997174|gb|ABN61249.1| OmpA/MotB domain protein [Shewanella baltica OS155] gi|151364879|gb|ABS07879.1| OmpA/MotB domain protein [Shewanella baltica OS185] gi|160860416|gb|ABX48950.1| OmpA/MotB domain protein [Shewanella baltica OS195] gi|217498845|gb|ACK47038.1| OmpA/MotB domain protein [Shewanella baltica OS223] gi|304352356|gb|EFM16754.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|306913092|gb|EFN43515.1| OmpA/MotB domain protein [Shewanella baltica BA175] gi|315267131|gb|ADT93984.1| OmpA/MotB domain protein [Shewanella baltica OS678] Length = 289 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +D+ + + L ++ E LA E++ + +TD+ N ++S RA S Sbjct: 184 YDEGGTDLTRFSQQQLSRVQEYLAYDPLVELVLVDAYTDSY---GGRSVNQKVSDKRAES 240 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + SG+ +DRI + G R ++D + NRR+ I + Sbjct: 241 VKDFFVASGIPQDRIVTV-GHGERRHVASNDDMDERARNRRVVIRISKP 288 >gi|330861238|emb|CBX71489.1| hypothetical protein YEW_CQ10840 [Yersinia enterocolitica W22703] Length = 239 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 2/97 (2%) Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVS 305 +L+ I +L IS+ GHTD P+ + NW LS DRA ++ + L+ G+ Sbjct: 1 MRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSNWELSADRANASRRELLAGGLD 60 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 E ++ ++ G A + NRRI ILV ++Q Sbjct: 61 EGKVLRVVGMASTMRLKEQASDDPVNRRISILVLNKQ 97 >gi|262274869|ref|ZP_06052680.1| outer membrane protein [Grimontia hollisae CIP 101886] gi|262221432|gb|EEY72746.1| outer membrane protein [Grimontia hollisae CIP 101886] Length = 197 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 8/102 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P L+++ + L + ++I GH N LS RA + Sbjct: 79 FANDSSALRPSNYAKLEQLADFLNDQRDAHVTIEGHASKV---GNPDYNLSLSQRRANAV 135 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 + L+ G++ R+ I G+ I D + NRR+ Sbjct: 136 ARALINDFGIAPSRVDAI-GYGDTEPLIDEDSEYAHDVNRRV 176 >gi|304414298|ref|ZP_07395666.1| outer membrane protein A [Candidatus Regiella insecticola LSR1] gi|304283512|gb|EFL91908.1| outer membrane protein A [Candidatus Regiella insecticola LSR1] Length = 389 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 +FD + S PE + L + L + + G+TD N LS Sbjct: 265 DVLFDFNKSALKPEGLTQLDDLYSQLSSINPKNGSVLVLGYTDRM---GKEAYNQALSQR 321 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDILVE 339 RA S L+ G+ D+IS G D +A +RR+ I V+ Sbjct: 322 RAQSVMDYLITKGIPADKISA-RGMGEANPVTGSTCGDDMKRAAKIECLAPDRRVVIEVK 380 Query: 340 DRQ 342 + Sbjct: 381 GEK 383 >gi|302038649|ref|YP_003798971.1| peptidoglycan-associated lipoprotein pal [Candidatus Nitrospira defluvii] gi|300606713|emb|CBK43046.1| Peptidoglycan-associated lipoprotein Pal (modular protein) [Candidatus Nitrospira defluvii] Length = 250 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 71/251 (28%), Gaps = 28/251 (11%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 S+ I D T+ + G + + + + Sbjct: 25 SKKSIQSGGDAQSTERGMAKSGGPAPSAMGSTGGVGGMEPPAATFPDLSLSSKPDDLETG 84 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 G S K+ ++E + + + ++++D+ ++ + + + Sbjct: 85 GLRGFDSVSGGKAPSEERLGGGGTMLAKVEPSESTARQIEDIRREQAKEQAASAEAGLRD 144 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272 F S E L + + + + + I GH Sbjct: 145 ---------------------VFFGYDSWTITEEGRQSLTQDAQWIKANAGALVKIEGHC 183 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSA 330 D N L RA + L++ GV +R+ + + R ++ Sbjct: 184 DER---GTLAYNLVLGEKRAKAVRNYLVELGVGANRL-AVVSYGKERPFCNERNESCYQQ 239 Query: 331 NRRIDILVEDR 341 NRR ++V + Sbjct: 240 NRRGHVVVRSK 250 >gi|260914347|ref|ZP_05920816.1| outer membrane protein A [Pasteurella dagmatis ATCC 43325] gi|260631448|gb|EEX49630.1| outer membrane protein A [Pasteurella dagmatis ATCC 43325] Length = 341 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 16/118 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + PE VL I +A + +++ G+TD N +LS RA + Sbjct: 228 FAFDKANLKPEAQGVLDGIYGEIAQLQSASVAVAGYTDRL---GSDAYNLKLSQRRADTV 284 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILVEDRQ 342 L+ GV+ IS +G + D + +RR++I V+ + Sbjct: 285 ANYLVSKGVAPQAISA-TGMGESSPVTGNKCDSVKGRKALIACLADDRRVEISVKGNK 341 >gi|255321985|ref|ZP_05363135.1| OmpA family protein [Campylobacter showae RM3277] gi|255301089|gb|EET80356.1| OmpA family protein [Campylobacter showae RM3277] Length = 192 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 9/151 (5%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 ++ + + ++ + ++ SI Q T FD + + Sbjct: 45 EVDMSADANQNMGGMNSSDNMMSDSERLQQLISSIEGQVQTVYFDFDKFNIKGDMQSAIN 104 Query: 254 KIGEVLAHSTEV---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + S + + G+ D N+ L L RA +A L+K GV+ DRI+ Sbjct: 105 TNAGLFNQSEAQALSVKVEGNCDEW---GTDEYNYALGLKRAKAAKDALVKQGVAADRIT 161 Query: 311 KISGFAHHRLKIASDPMN--SANRRIDILVE 339 +S + + NRR + V Sbjct: 162 VVS-YGESNPVCTDKTKACDAQNRRAEFKVL 191 >gi|94264973|ref|ZP_01288744.1| OmpA/MotB [delta proteobacterium MLMS-1] gi|93454576|gb|EAT04854.1| OmpA/MotB [delta proteobacterium MLMS-1] Length = 192 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 7/117 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNW 285 D FD S + + GE +L + T + + G+TD N Sbjct: 80 RTSDPLLPVYFDFDRSHIRGDQEERITHNGEYMLDNRTVRVRVEGNTDER---GTREYNM 136 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340 L RA SA + LM G++ R+ +S + R + S NRR+D ++ Sbjct: 137 ALGERRAMSAKKYLMDMGIASGRLETVS-YGEERPIAFGQDEESWSLNRRVDFVILR 192 >gi|77165349|ref|YP_343874.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707] gi|254434450|ref|ZP_05047958.1| OmpA family protein [Nitrosococcus oceani AFC27] gi|76883663|gb|ABA58344.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707] gi|207090783|gb|EDZ68054.1| OmpA family protein [Nitrosococcus oceani AFC27] Length = 466 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 65/232 (28%), Gaps = 18/232 (7%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 ++ Q S + + + + + L +E Sbjct: 218 DSEKGWKVGGVAVRDIQRGAEVFSRIAQGDIQGAIEMIRPHDPQERERLREQVRQLQREL 277 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI----------LISIIDQR 232 ++R ++ + IS + R + I + Sbjct: 278 ERWRPIEERQREHERIISEVARRSAEQLGLGSRRQTVPRFKLPEPRLDLRSARIQLGTTF 337 Query: 233 NTPM--FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + + F S+ P L + + + I I G+ D + N RLS Sbjct: 338 HWILDRFRLESAALEPHHRRQLNDLANQVKSNPYAEIEIVGYADTT---GPLAFNQRLSE 394 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 RA + L+ GV +I SG + + + NRR++I Sbjct: 395 QRANAVCDYLLSRGVEGSKIKSASGRGEGEPLVPERAEADRARNRRVEIFFR 446 >gi|304412567|ref|ZP_07394172.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|307303583|ref|ZP_07583336.1| OmpA/MotB domain protein [Shewanella baltica BA175] gi|304349043|gb|EFM13456.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|306912481|gb|EFN42904.1| OmpA/MotB domain protein [Shewanella baltica BA175] Length = 369 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 8/131 (6%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 V + + + F S++ ++++ L + E I GH Sbjct: 234 HKVDSVGCTIYENVKNKEDVGSIQFANDSAVVKKVFYKDIERLANYLNKNPEFTVEIAGH 293 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328 N LS RA + Q+L++ G+S++R++ +G+ + +A D Sbjct: 294 ASNV---GKPEYNMVLSDKRADAVAQILVEKYGISKNRVTS-NGYGVTQPLVAGDSKEAY 349 Query: 329 SANRRIDILVE 339 +ANRRI+ +V Sbjct: 350 AANRRIEAIVT 360 >gi|126731561|ref|ZP_01747367.1| OmpA/MotB [Sagittula stellata E-37] gi|126708097|gb|EBA07157.1| OmpA/MotB [Sagittula stellata E-37] Length = 220 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 8/107 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRA 292 +F +S PE + L + + L S + GHTD A N LS RA Sbjct: 114 LFAYNSDDLTPEAMGKLSSLADALRDPRLSDARLVFIGHTDGV---GSAAYNMDLSRRRA 170 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + + + G+ RI + G RLK + DP + NRR+ +++ Sbjct: 171 EAVARFVQGTMGLPPSRI-RAEGVGFSRLKNSFDPAAAQNRRVQLVL 216 >gi|126173289|ref|YP_001049438.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155] gi|125996494|gb|ABN60569.1| OmpA/MotB domain protein [Shewanella baltica OS155] Length = 363 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 8/131 (6%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 V + + + F S++ ++++ L + E I GH Sbjct: 228 HKVDSVGCTIYENVKNKEDVGSIQFANDSAVVKKVFYKDIERLANYLNKNPEFTVEIAGH 287 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328 N LS RA + Q+L++ G+S++R++ +G+ + +A D Sbjct: 288 ASNV---GKPEYNMVLSDKRADAVAQILVEKYGISKNRVTS-NGYGVTQPLVAGDSKEAY 343 Query: 329 SANRRIDILVE 339 +ANRRI+ +V Sbjct: 344 AANRRIEAIVT 354 >gi|118591499|ref|ZP_01548896.1| hypothetical protein SIAM614_27927 [Stappia aggregata IAM 12614] gi|118435827|gb|EAV42471.1| hypothetical protein SIAM614_27927 [Stappia aggregata IAM 12614] Length = 193 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 8/156 (5%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 ++++ A ++ + L S+ FD S+ Sbjct: 37 QGAQQKVDLTADELQQAALENIQKYPGANAPNTLPLADKLASLRQFNVEITFDFDSARIR 96 Query: 246 PETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 PE+ + I + L + I GHTDA + N LSL RA + + L+ + Sbjct: 97 PESFETVGLIADALHTPYLQGQTFFIVGHTDA---KGAREYNLELSLKRAQAVREALVTT 153 Query: 303 -GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 V + + + G +L+ ++P + NRR+ ++ Sbjct: 154 FRVPGEYLFAV-GLGEEQLRDPANPDAAVNRRVQLI 188 >gi|332285773|ref|YP_004417684.1| lipoprotein PlpD [Pusillimonas sp. T7-7] gi|330429726|gb|AEC21060.1| lipoprotein PlpD [Pusillimonas sp. T7-7] Length = 266 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 14/116 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S++ + ++ + L E +++ GHTD N RLS RA S Sbjct: 155 FAFGSAVLTTAGLSTVRDVATQLKQLSKLEQVAVAGHTDRIGDAGA---NQRLSQQRAES 211 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDRQ 342 L+ G+ + + G+ R + D + + NRR+DI V+ ++ Sbjct: 212 VRNALVAQGIPSSAV-RAQGYGESRPAVQCDQQDRNDLIACLAPNRRVDIEVQGQR 266 >gi|146305280|ref|YP_001185745.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp] gi|145573481|gb|ABP83013.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 317 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 8/140 (5%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L + + V + G+ FD + ++ L +I ++L Sbjct: 178 VLERKAMEQRMVLVEAGELQRGLDAQGRVALYGLYFDTDKADMRADSQPQLAEIAKLLQA 237 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHR 319 S + + + GHTDA N LS RA S + L+ G++ R+S + G Sbjct: 238 SAQLQVLVVGHTDAQ---GALDYNRDLSQRRAQSIVEALVSQHGIARQRLSAV-GVGMAA 293 Query: 320 LKIAS--DPMNSANRRIDIL 337 ++ + + NRR++++ Sbjct: 294 PVASNRDEAGRALNRRVELV 313 >gi|262066235|ref|ZP_06025847.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC 33693] gi|291380091|gb|EFE87609.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC 33693] Length = 82 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 5/85 (5%) Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + +++ GHTD+ + N LS RA + L++ G++E+RI I Sbjct: 1 IEQNNYEVTLEGHTDSI---GSNQYNIGLSRRRAEAVKAKLIEFGLAEERIVGIEAKGEE 57 Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341 ++ NRR++ + R Sbjct: 58 YPVATNETPEGRLQNRRVEFRLVQR 82 >gi|163866830|gb|ABY47585.1| outer membrane protein A [Acinetobacter baumannii] Length = 341 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 228 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 284 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 285 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 336 >gi|163866828|gb|ABY47584.1| outer membrane protein A [Acinetobacter baumannii] Length = 333 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 8/105 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 228 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 284 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 S L+ + V R+S GFA + + NRR+ Sbjct: 285 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRV 328 >gi|187250732|ref|YP_001875214.1| outer membrane protein [Elusimicrobium minutum Pei191] gi|186970892|gb|ACC97877.1| Outer membrane protein [Elusimicrobium minutum Pei191] Length = 174 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S +L K+ + + + GHTD N LS RA + Sbjct: 65 FEFDSVHLAASAYPILDKVAGFMVGRQHIKLIVEGHTDNV---GSDEYNDWLSEARAIAV 121 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 ++ GV D I + GF R D + NRRI V DR Sbjct: 122 KSYIVSRGVHPDSIK-VYGFGKRRPLTLDDSIEGRATNRRIVFTVTDR 168 >gi|75676898|ref|YP_319319.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255] gi|74421768|gb|ABA05967.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255] Length = 167 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + P+ I L+K L +I GH D N L R Sbjct: 59 DRVFFESDQTSLSPQAITTLEKQAHWLQTYHRYSFTIEGHADER---GTREYNIALGARR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A S L G+ R+ IS + R +D S NRR Sbjct: 116 AQSVRSFLASRGIDPSRMRTIS-YGKERPVAVCNDISCWSQNRR 158 >gi|129307156|gb|ABO30516.1| outer membrane protein A [Acinetobacter baumannii] Length = 337 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 228 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 284 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 285 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 336 >gi|27382260|ref|NP_773789.1| peptidoglycan-associated lipoprotein [Bradyrhizobium japonicum USDA 110] gi|27355431|dbj|BAC52414.1| peptidoglycan-associated lipoprotein [Bradyrhizobium japonicum USDA 110] Length = 162 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + P+ IV L+K + L +I GH D N L R Sbjct: 54 DRVFFESDQTDLTPQAIVTLEKQAQWLQTYPRYSFTIEGHADER---GTREYNIALGARR 110 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A S L G+ +R+ IS + R +D S NRR Sbjct: 111 AQSVRSFLASRGIDANRMRTIS-YGKERPVAVCNDISCWSQNRR 153 >gi|297183997|gb|ADI20117.1| outer membrane protein and related peptidoglycan-associated (lipo)proteins [uncultured alpha proteobacterium EB080_L06A09] Length = 613 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 44/118 (37%), Gaps = 7/118 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I+ I F+ + + V++ I +VL E I+GHTD+ N Sbjct: 492 INTIISNTKIRFEPGKVVLNDDNFTVIKLIADVLRTCPEAKFEIQGHTDS---SGSEELN 548 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 LS RA + L+ V IS G+ + NRRI+I + + Sbjct: 549 QNLSQSRAEAVLFELLNRRVLTSGISA-KGYGSISPIADNKTEEGREINRRIEIKLVE 605 >gi|94499177|ref|ZP_01305715.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Oceanobacter sp. RED65] gi|94428809|gb|EAT13781.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Oceanobacter sp. RED65] Length = 294 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 8/115 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLS 288 R+ F + + L I + EV I GH+DA +N RLS Sbjct: 174 SRSKVFFPGGGAALDKQARKKLDLIALYVKADPEVQAIYIDGHSDAL---GRRYNNRRLS 230 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 DRA + L++ G+ + I ++ + NRR+ I +E Sbjct: 231 EDRALKVNEYLIERGLDAE-IITTRYHGERYPVASNATAAGRAQNRRVTIRLEKP 284 >gi|262364585|gb|ACY61142.1| OmpA domain protein [Yersinia pestis D182038] Length = 987 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250 + I TL +++ + +G L +LI D F + E I Sbjct: 807 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 862 Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306 ++++G LA I + GHTD PFR+ +N +LS RA L + ++E Sbjct: 863 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 922 Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R G + NRR+DIL Sbjct: 923 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 957 >gi|332306543|ref|YP_004434394.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173872|gb|AEE23126.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 366 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD +SS +Q+ + + ++ G+ A + N +LS++RA + Sbjct: 254 LFDNNSSKLKNIDSASVQEFVDFMRRYGSTDAVIEGYASA---PGTEQYNMKLSVERAEA 310 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340 Q L++ + R+ + G+ +L ++ + NRRI+ V Sbjct: 311 VRQYLVEQYNIDSARLEAV-GYGETKLLDKANTREAHQKNRRIEAYVTA 358 >gi|299773247|gb|ADJ38698.1| outer membrane protein P5 [Haemophilus parasuis] Length = 369 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 246 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 302 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILV 338 RA + ++ GV+ ++ + G+ + D + + +RR++I V Sbjct: 303 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDALKARKSLIVCLAPDRRVEIQV 361 Query: 339 EDRQ 342 + + Sbjct: 362 QGSK 365 >gi|110598823|ref|ZP_01387080.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031] gi|110339554|gb|EAT58072.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031] Length = 155 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 +D S + + L + + + + + + GH D N L R Sbjct: 50 GDVFYDFDKSALRSDAVSQLNTNADWMKANRAKSVVVEGHCDER---GTNEYNLALGERR 106 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 A +A ++ GV R+ +S F + A + NRR Sbjct: 107 ANAAKDYIVNLGVDASRLKTVS-FGEEKPFAAGSTEEAWAQNRR 149 >gi|300716419|ref|YP_003741222.1| type IV / VI secretion system family protein, DotU [Erwinia billingiae Eb661] gi|299062255|emb|CAX59372.1| Type IV / VI secretion system family protein, DotU [Erwinia billingiae Eb661] Length = 408 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 46/106 (43%), Gaps = 3/106 (2%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 +F++ S P ++ ++ + + + + +TD P R N+ SL +A++ Sbjct: 287 LFNRGGSDLTPAGRAIMVRVAAAMDNIKGTLQVSVYTDNQPQRTARFPSNYEYSLAQAHT 346 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 +L + + + + G + +D + NRR++IL+ Sbjct: 347 LTSLLQQLMIQPGHMIRGEGRGDSNPLLPNDSQENRAQNRRVEILL 392 >gi|294013407|ref|YP_003546867.1| peptidoglycan-associated lipoprotein [Sphingobium japonicum UT26S] gi|292676737|dbj|BAI98255.1| peptidoglycan-associated lipoprotein [Sphingobium japonicum UT26S] Length = 170 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 8/113 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + +FD + +LQ L + ++I GH D N L Sbjct: 61 SSDRILFDTDQYDVDAQDQQILQSQAAWLQQNPNVRVTIEGHADER---GTRDYNIALGE 117 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILVE 339 RA +A L G+ RI+ +S + R + + + NRR + + V+ Sbjct: 118 RRANAAKNYLASLGIDAGRITTVS-YGKERPAALGSDEAAWAQNRRAVTVTVQ 169 >gi|300772832|ref|ZP_07082701.1| outer membrane protein [Sphingobacterium spiritivorum ATCC 33861] gi|300759003|gb|EFK55830.1| outer membrane protein [Sphingobacterium spiritivorum ATCC 33861] Length = 650 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 12/116 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + +D + S P+ VL ++ + + I + HTD+ N +LS R Sbjct: 538 DNIYYDFNKSDIRPDAAKVLDQLVNTMTENPTLQIELSSHTDSR---GSDNYNMKLSDRR 594 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 A SA ++ G++++R+ G+ RL ++ + ANRR ++ V Sbjct: 595 AKSAVDYIISKGIAKERLVS-KGYGETRLVNECANGVKCTEEQHQANRRTEVKVLK 649 >gi|218708964|ref|YP_002416585.1| sodium type flagellar protein MotY precursor [Vibrio splendidus LGP32] gi|218321983|emb|CAV17990.1| Sodium type flagellar protein MotY precursor [Vibrio splendidus LGP32] Length = 293 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 95/307 (30%), Gaps = 23/307 (7%) Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 +T M F ++ + + + ++ E Sbjct: 5 LITGSM-LFSLLMSSSVLAQEKRYGAS-----PLQSTWEMVANTPLECRLVHPIPNFGDA 58 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 K +D ++ + + + + + + ++ Sbjct: 59 EFSSRASKKIILDFELKMRRPMGATRNVSLISMPPAWRPGESADRMTTIKFFQQFDGYVG 118 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 +++ E P S ++ + ++ + +SS L + + Sbjct: 119 GQTAWGILSELEKGRYPTFSYQEWQSRDQRIEVA-----LSSVLFQEKYNVFSDCIANLL 173 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPF 277 + IS +D++S + L +I + + ++ ++ + +TD+ Sbjct: 174 PYSFEDISFTILH----YDRNSDQLNKSSRKRLSQIADYVRYNQDIDLVLVATYTDSVDS 229 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + I+ LS RA S + G+ EDRI ++ G+ R ++ NRR+ Sbjct: 230 KGIS---QNLSERRAESLREYFKSLGLPEDRI-QVQGYGKRRPIADNNSPIGKDKNRRVV 285 Query: 336 ILVEDRQ 342 I + Q Sbjct: 286 ISLGRTQ 292 >gi|37704678|gb|AAR01611.1| OprF [Pseudomonas sp. MFY338] Length = 315 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272 V + + ++ FD S+ P + ++ + + + ++ GHT Sbjct: 209 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHT 268 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 269 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 315 >gi|77465494|ref|YP_354997.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides 2.4.1] gi|77389912|gb|ABA81096.1| OmpA/MotB domain protein [Rhodobacter sphaeroides 2.4.1] Length = 254 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 67/207 (32%), Gaps = 7/207 (3%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 S + Q+ K + D + E+ P S + + Sbjct: 49 AARSGNGQARGLKLVTVDRIGPAPAMADVPDSLGAPAGEDPGLRPTASTDSAPGETGRPV 108 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L L + + + G+L + F S++ + + Sbjct: 109 L-GLPQGADRLAAADPPPEGRETAEVSPESFGLLDPALQVNVRIHFAFDSAVLAADQTPL 167 Query: 252 LQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRI 309 L ++ V+ S I GHTDA N +LSL RA + L G++ +R+ Sbjct: 168 LAQLCTVMKASDIRLFQIVGHTDA---AGSEAYNQQLSLLRAEEVRRYLTGPCGIAPERL 224 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDI 336 + G L DP + NRR++ Sbjct: 225 RAV-GMGERFLADKKDPRSGENRRVEF 250 >gi|189220464|ref|YP_001941104.1| Outer membrane protein or related peptidoglycan-associated (lipo)protein [Methylacidiphilum infernorum V4] gi|189187322|gb|ACD84507.1| Outer membrane protein or related peptidoglycan-associated (lipo)protein [Methylacidiphilum infernorum V4] Length = 179 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 7/108 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + F S+ ++KI + + + I + GH D N L Sbjct: 70 KDQVIYFAFDSAAIPGSERGKIEKIADWMNQHPQLSILLAGHCDER---GTEEYNRGLGE 126 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 RA + + L+ G+S ++I IS + R + NRR++ Sbjct: 127 RRAIAVREYLIGLGISAEKIHTIS-YGKDRPIAIGHTEADYAKNRRVE 173 >gi|254230012|ref|ZP_04923412.1| outer membrane protein [Vibrio sp. Ex25] gi|151937453|gb|EDN56311.1| outer membrane protein [Vibrio sp. Ex25] Length = 288 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLP 246 +++RL L +++ LS + + ++ I N F S+ P Sbjct: 118 QRRRLNQLEQQLDYVLSQ-TTCTPPDDIEALRSDLNVVAEIYALLNIDNQFAVDSAEINP 176 Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + + L + +L + + GH D N +L+ RA + L G++ Sbjct: 177 KYMGHLAEAAYILRDHPNLTLVVTGHAD---VTGAPDYNQKLAQARAEQVKRYLTVFGIT 233 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +R++ + NRR+ I V Sbjct: 234 SERVTT-KSVGDSLPLYEGETPAVRLTNRRVSIEVISPN 271 >gi|78061843|ref|YP_371751.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383] gi|77969728|gb|ABB11107.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 404 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 12/158 (7%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 R +L LA+ + L VA V+ + L R + MF + P Sbjct: 254 RASQLDVLARNLEQQLRDEVAAGNVELIRDSGRNALTL------RFSGMFGPGEATVAPW 307 Query: 248 TIVVLQKIGEVLAHSTE--VISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGV 304 V+ G +A T+ + + G+ D++P + N LS RA Q+L+ +GV Sbjct: 308 GASVVASAGREIAAVTKGATLRVAGYADSTPISSTRQASNQVLSDVRARHVAQILVAAGV 367 Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 S RI + G + + NRR+++ + D Sbjct: 368 SAPRI-SVEGNGDADSLADNGTASGRARNRRVEVTISD 404 >gi|329888410|ref|ZP_08267008.1| peptidoglycan-associated lipoprotein [Brevundimonas diminuta ATCC 11568] gi|328846966|gb|EGF96528.1| peptidoglycan-associated lipoprotein [Brevundimonas diminuta ATCC 11568] Length = 184 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 38/110 (34%), Gaps = 9/110 (8%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD S E L LA + + I G+ D N L R Sbjct: 74 DRVYFDLDSYSVRAEAQPRLDAQAAWLARYPQVTVRIEGNADER---GTREYNLALGARR 130 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR--RIDIL 337 A + L+ GV RI IS F R +++ + NR R I+ Sbjct: 131 AEAVRSYLISRGVPAARIDTIS-FGKERPIAEGSNESAWAQNRNARTAIV 179 >gi|283851028|ref|ZP_06368313.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B] gi|283573674|gb|EFC21649.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B] Length = 263 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 9/152 (5%) Query: 191 RLQDLAKKISSTLSGLVADNI--VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + L +I+ + L++ ++ +G+L+ + N+ MF S+ P Sbjct: 100 QENKLKYEIALLIKELISSDLSVKNNSGVSNDSSGVLMQVN---NSVMFRTGSAELTPAA 156 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSED 307 VL + +L +++RGH D W LS RA +A + L + G+ Sbjct: 157 AKVLDGVARILQDFKINLTVRGHADDEEKGGPYPSKWELSAARAAAATRYLAEKTGIPTT 216 Query: 308 RISKISGFAHHRLKIASDPMN--SANRRIDIL 337 R+ + G A + + + NRRI+ Sbjct: 217 RLRAV-GLADSQPLVPPTSAENKARNRRIEFF 247 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 5/96 (5%) Query: 1 MNSHGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDD 60 M + D ++I ++ ++ GSWK+ YADF+T +MAFFL++W++ + Sbjct: 1 MAKNSDGK-----TVVIYRESDEGHGGHHGGSWKVAYADFVTAMMAFFLLLWLVVSLKPQ 55 Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQN 96 K+ + F + + + Sbjct: 56 RKQELSLVFQDKNVPSKEKVQNLEKVPTFISPDAIK 91 >gi|254486323|ref|ZP_05099528.1| OmpA/MotB [Roseobacter sp. GAI101] gi|214043192|gb|EEB83830.1| OmpA/MotB [Roseobacter sp. GAI101] Length = 231 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +SS +L++ + E + GHTDA R N L L RA S Sbjct: 89 FDFNSSQLDAAAQAILRQQANWIRQFPEVRFRVYGHTDAV---GSNRSNKALGLRRARSV 145 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L G+S R+ + F + I + ANRR Sbjct: 146 VAFLTTQGISTSRLEAVVSFGETQPLIVTQGRERANRR 183 >gi|170739239|ref|YP_001767894.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46] gi|168193513|gb|ACA15460.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46] Length = 178 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 8/102 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD +S L + + L + + GHTDA N LS RA Sbjct: 76 FDYNSDQLTGAAKQNLDEFAKALRDDRLRSSTFLVEGHTDAR---GGEEFNLGLSGRRAD 132 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + L GV +++ G R + P++ ANRR++ Sbjct: 133 AVVRYLSGRGVLAAQLTA-RGLGKSRPLTDN-PLDPANRRVE 172 >gi|37704666|gb|AAR01605.1| OprF [Pseudomonas sp. MFY220] gi|37704668|gb|AAR01606.1| OprF [Pseudomonas sp. MFY222] Length = 315 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272 V + + ++ FD S+ P + ++ + + + ++ GHT Sbjct: 209 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHT 268 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 269 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 315 >gi|313497453|gb|ADR58819.1| OmpA/MotB domain-containing protein [Pseudomonas putida BIRD-1] Length = 326 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L I + + V + GH+D N LS RA + Sbjct: 179 FPGGGIELDAAAKARLDVILDYMKADPTVNHVELNGHSDN---SGNRLANRDLSRRRALA 235 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 +GV +++I + ++ + NRR++I ++ Sbjct: 236 VADYFKANGVPDEQI-TVRFHGERYPLAKNNSASNRARNRRVNIELDR 282 >gi|254467600|ref|ZP_05081009.1| OmpA/MotB domain protein [Rhodobacterales bacterium Y4I] gi|206684348|gb|EDZ44832.1| OmpA/MotB domain protein [Rhodobacterales bacterium Y4I] Length = 191 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 59/175 (33%), Gaps = 6/175 (3%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + LS E+I +K++ + L SST V Sbjct: 17 MFAPLAQAQSNGSELSVEEITEAFKKQKTRGLVIVPSSTDQSQDTAQETATVAAAAEEYN 76 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR 282 + FD S+ + L + E + I GHTD+ A Sbjct: 77 PVDQQTQINVQISFDFDSAALRADQAPKLANMCESMKLMGGTVFQIIGHTDS---SGSAS 133 Query: 283 DNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 N RLSL RA + L+ S GV ED + I G +P NRR++ Sbjct: 134 YNERLSLLRAQEVRRHLISSCGVPEDMLKAI-GMGETAPFNQDNPRADENRRVEF 187 >gi|56461082|ref|YP_156363.1| OprF [Idiomarina loihiensis L2TR] gi|56180092|gb|AAV82814.1| Outer membrane porin [Idiomarina loihiensis L2TR] Length = 363 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 17/190 (8%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 G + + E P + K + + K ++ + V + Sbjct: 178 GGRDTSPEPRTRPEPRPEPQQAAPEPESKPVDSDGDGVVDSKDKCANTPKNYSVDETGCI 237 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHT 272 ET +L+ FD +SS ++ + E + + I+I GHT Sbjct: 238 LYENETITEELLVE---------FDLNSSNIRSGERSDIKDMAEFMKEHPQLDITIHGHT 288 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NS 329 D++ A+ N LS RA + L+K G+ + R+ G + K+ + Sbjct: 289 DST---GEAKYNQWLSERRAEAVANALVKQHGIEKSRVD-FKGHGESQPKVRENSAADRQ 344 Query: 330 ANRRIDILVE 339 NRRI+ ++ Sbjct: 345 ENRRIEATLK 354 >gi|332161206|ref|YP_004297783.1| hypothetical protein YE105_C1584 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665436|gb|ADZ42080.1| hypothetical protein YE105_C1584 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 558 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 8/134 (5%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVIS 267 ++ + + + + + PMFD +S P +L H + Sbjct: 419 LLNRINQQIESYQDIPAFSSTQMAPMFDSNSIKLKPNAQTNETLASLLLLVEQHQGRKVL 478 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 I GH+D + A N +S RA L+K+ I G ++D Sbjct: 479 IIGHSDNT---GSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVASNDTP 535 Query: 328 NS--ANRRIDILVE 339 NRR+++L+ Sbjct: 536 AGQDQNRRVEVLLL 549 >gi|318605099|emb|CBY26597.1| putative OMPA family outer membrane porin precursor [Yersinia enterocolitica subsp. palearctica Y11] Length = 556 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 8/134 (5%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVIS 267 ++ + + + + + PMFD +S P +L H + Sbjct: 417 LLNRINQQIESYQDIPAFSSTQMAPMFDSNSIKLKPNAQTNETLASLLLLVEQHQGRKVL 476 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 I GH+D + A N +S RA L+K+ I G ++D Sbjct: 477 IIGHSDNT---GSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVASNDTP 533 Query: 328 NS--ANRRIDILVE 339 NRR+++L+ Sbjct: 534 AGQDQNRRVEVLLL 547 >gi|117921584|ref|YP_870776.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3] gi|117613916|gb|ABK49370.1| OmpA/MotB domain protein [Shewanella sp. ANA-3] Length = 373 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 54/134 (40%), Gaps = 8/134 (5%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 V + + + F S++ E ++++ + + E I GH Sbjct: 238 HKVDSVGCTIYENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYMNKNPEFTVEIAGH 297 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328 N LS RA + ++L++ G+S+ R++ +G+ + +A D Sbjct: 298 ASNV---GKPEYNMVLSDKRADAVAKILVEKYGISQSRVTS-NGYGITKPLVAGDSKEAH 353 Query: 329 SANRRIDILVEDRQ 342 +ANRRI+ +V + Sbjct: 354 AANRRIEAIVTTTE 367 >gi|94971347|ref|YP_593395.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter versatilis Ellin345] gi|94553397|gb|ABF43321.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter versatilis Ellin345] Length = 605 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 9/107 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S PLP +I L ++ + LA +++ I I G+TD N LS RA + Sbjct: 496 FASGSDQPLPTSIAALNRLKDELAINSQLAIQIDGYTDDV---GSDILNQPLSEKRALAV 552 Query: 296 YQVLMKSG---VSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 + ++ E R ++G + + NRR++I Sbjct: 553 KRYFQQTAPLSFPEMRFKSVAGHGSQNPLADNGTLQGKALNRRVEIT 599 >gi|332852270|ref|ZP_08434075.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013150] gi|332870493|ref|ZP_08439257.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013113] gi|332729400|gb|EGJ60740.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013150] gi|332732230|gb|EGJ63498.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013113] Length = 353 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 228 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 284 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 285 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 336 >gi|194335385|ref|YP_002017179.1| peptidoglycan-associated lipoprotein [Pelodictyon phaeoclathratiforme BU-1] gi|194307862|gb|ACF42562.1| peptidoglycan-associated lipoprotein [Pelodictyon phaeoclathratiforme BU-1] Length = 154 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 35/112 (31%), Gaps = 8/112 (7%) Query: 226 ISIIDQRNTPMF-DKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARD 283 I II +F D S + + L+ + I GH D Sbjct: 41 IQIILPGLGDLFYDFDKSDLRADAVEQLKTNANWMQVFKNNSVIIEGHCDER---GTNEY 97 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 N L RA SA + G+ R+ +S + + + NRR Sbjct: 98 NLALGERRANSARNYTINLGIDPVRLKTVS-YGEEKPFATGSTEEAWAQNRR 148 >gi|117618280|ref|YP_855820.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559687|gb|ABK36635.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 351 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 18/125 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +F + PE + L+ + + +A + G+TD +N LS Sbjct: 220 SDVLFAFGKAELKPEGMQALESLYQQIADVKPKDGNAVVMGYTDRI---GSDANNQALSE 276 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILV 338 RA + L+ G+ D++ I G S D + + +RR+++ V Sbjct: 277 ARASTVANFLIGKGLPADKV-SIQGNGESNPVTGSQCDAIKARAALIDCLAPDRRVEVRV 335 Query: 339 EDRQG 343 QG Sbjct: 336 TGTQG 340 >gi|129136|sp|P09146|OMPA_ENTAE RecName: Full=Outer membrane protein A; Flags: Precursor gi|40838|emb|CAA25062.1| unnamed protein product [Enterobacter aerogenes] Length = 350 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 18/148 (12%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--- 263 DN + ++ +F+ + + PE L ++ L++ Sbjct: 197 QEDNAPVVAPAPAPAPEVTTKTFTLKSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKD 256 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI- 322 + G+TD + N +LS RA S L+ G+ ++IS G Sbjct: 257 GSAVVLGYTDRI---GSEQYNQKLSEKRAQSVVDYLVAKGIPANKISA-RGMGESDPVTG 312 Query: 323 ---ASDPMNSA-------NRRIDILVED 340 + +A +RR+ I V+ Sbjct: 313 NTCDNVKARAALIDCLAPDRRVAIEVKG 340 >gi|91978605|ref|YP_571264.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] gi|91685061|gb|ABE41363.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] Length = 165 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + P+ L K + L +I GH D N L R Sbjct: 57 DRVFFESDQTELSPQAAATLDKQAQWLQTYNRYSFTIEGHADER---GTREYNIALGARR 113 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A S L G+ R+ IS + R +D S NRR Sbjct: 114 AQSVRNYLSSRGIEPSRMRTIS-YGKERPVAVCNDISCWSQNRR 156 >gi|327404631|ref|YP_004345469.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327320139|gb|AEA44631.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 798 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 17/124 (13%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 I N FD + P+ L KI E++ + + + HTD+ N + Sbjct: 677 IGLNVNPIYFDYNKWDIRPDAAKELDKIVEIMKKNPNIKIELGSHTDSR---GKDDYNIK 733 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP------------MNSANRRI 334 LS RA ++ + ++ G++ RI G+ +LK++ + + NRR Sbjct: 734 LSDQRAKASARYIVSKGIAAGRI-TGKGYGETKLKVSDEQINNMPKWDEKEKGHQLNRRT 792 Query: 335 DILV 338 + ++ Sbjct: 793 EFII 796 >gi|293396726|ref|ZP_06641002.1| outer membrane protein A [Serratia odorifera DSM 4582] gi|291420990|gb|EFE94243.1| outer membrane protein A [Serratia odorifera DSM 4582] Length = 364 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 19/124 (15%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ S PE L ++ L+ + + G+TD N +LS Sbjct: 235 KSDVLFNFGKSSLKPEGQQALDQLYTQLSSMDPKDGSVVVLGYTDPV---GKDAANQKLS 291 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMN-----SANRRIDI 336 RA S L+ G+ D+IS G S + NRR++I Sbjct: 292 EARARSVVDYLVSKGIPADKISA-RGMGEADQVTDSCGYKNGRATKAQIECLAPNRRVEI 350 Query: 337 LVED 340 V+ Sbjct: 351 EVKG 354 >gi|77464505|ref|YP_354009.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1] gi|77388923|gb|ABA80108.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1] Length = 310 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 12/181 (6%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 E L + A + ++ L + + V D V +++ Sbjct: 133 EGAEGAEAVSLLISRSDATGFVQVIEALPRTATPPAPVAVPDEPVAAEAPAPAAGTLILR 192 Query: 228 IIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282 + + + F S+ L + + L + GHTDA Sbjct: 193 LEETGAAVLEGLVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDA---SGGLE 249 Query: 283 DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 N LS RA S + L+ + GV +++ G + + + + NRR+++++ Sbjct: 250 GNVTLSRARAVSVRERLIARHGVDGAQVTA-DGVGYLAPRATNRTEEGRARNRRVEVMLL 308 Query: 340 D 340 Sbjct: 309 A 309 >gi|86138174|ref|ZP_01056749.1| OmpA/MotB domain protein [Roseobacter sp. MED193] gi|85825201|gb|EAQ45401.1| OmpA/MotB domain protein [Roseobacter sp. MED193] Length = 194 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 63/172 (36%), Gaps = 9/172 (5%) Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK---GVLFETTRTGILI 226 S E+I + ++++ + L SS + + + V T + Sbjct: 23 HAQASSEGQSVEEITKILQQQKTRGLVIAPSSAAAPAPQASDAQETATVATANTDYSPVD 82 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285 FD S+ P+ L + + I GHTD+ AR N Sbjct: 83 RQSQINLQISFDFDSATLRPDQQPKLVNMCASMQALQGTVFQIIGHTDS---SGSARYNE 139 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 RLSL RA + L+ + G+ ED + I G +++P NRR++ Sbjct: 140 RLSLLRAQEVRRHLISNCGIDEDMLKAI-GMGEAAPYNSANPRADENRRVEF 190 >gi|239501745|ref|ZP_04661055.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter baumannii AB900] Length = 349 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 224 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 280 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 281 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 332 >gi|110679377|ref|YP_682384.1| peptidoglycan-associated lipoprotein, putative [Roseobacter denitrificans OCh 114] gi|109455493|gb|ABG31698.1| peptidoglycan-associated lipoprotein, putative [Roseobacter denitrificans OCh 114] Length = 170 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F S P L+ + L A++ I GH D N L R Sbjct: 60 DRVLFAVDESSINPAGQTTLEGQAQWLLANTDYTAVIEGHADEQ---GTREYNVALGARR 116 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 A + + L+ GV+ +R+ +S + R + NRR Sbjct: 117 ANAVREYLISRGVAGNRLQTVS-YGKERPIEICSSEECYAKNRR 159 >gi|320577122|gb|ADW54070.1| outer membrane protein A [Sodalis glossinidius] Length = 358 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + PE L ++ L+ + + G+TD + N +LS Sbjct: 230 KSDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GTEQYNQKLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDIL 337 +RA S L+ G+ D+IS G + +A +RR++I Sbjct: 287 QERAQSVVSYLVSKGIPSDKISA-RGMGKSNPVTGNTCNSVKGRAAVISCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|169794817|ref|YP_001712610.1| putative Outer membrane protein precursor (OmpA-like) [Acinetobacter baumannii AYE] gi|213157857|ref|YP_002320655.1| outer membrane protein A [Acinetobacter baumannii AB0057] gi|215482363|ref|YP_002324545.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter baumannii AB307-0294] gi|301345435|ref|ZP_07226176.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter baumannii AB056] gi|301512590|ref|ZP_07237827.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter baumannii AB058] gi|301595016|ref|ZP_07240024.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter baumannii AB059] gi|169147744|emb|CAM85607.1| putative Outer membrane protein precursor (OmpA-like) [Acinetobacter baumannii AYE] gi|213057017|gb|ACJ41919.1| outer membrane protein A [Acinetobacter baumannii AB0057] gi|213988159|gb|ACJ58458.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter baumannii AB307-0294] Length = 353 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 228 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 284 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 285 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 336 >gi|124007657|ref|ZP_01692361.1| outer membrane protein OmpA family, putative [Microscilla marina ATCC 23134] gi|123986955|gb|EAY26720.1| outer membrane protein OmpA family, putative [Microscilla marina ATCC 23134] Length = 632 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 8/141 (5%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + + I + F S+I ++ V LQ + +++ H Sbjct: 499 AKAYPEFKPYESNTFIKRNGGQTNILAKLKMPHLYFAYKSTILDAQSRVYLQTVYKLMQH 558 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + + HTDA N LS RA + L G+ +I + GF R Sbjct: 559 HPDLHLRVEAHTDA---SGTWTSNLLLSEQRAKAVKAFLTDLGIPSGQIV-VKGFGEARP 614 Query: 321 KIASDPMNSANRRIDILVEDR 341 AS + NRR+ + + + Sbjct: 615 LGAS---AAKNRRVALYFKAK 632 >gi|21666310|gb|AAM73654.1|AF390104_1 outer membrane protein HMP [Acinetobacter baumannii] Length = 346 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 228 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 284 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 285 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 336 >gi|39995135|ref|NP_951086.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA] gi|39981897|gb|AAR33359.1| OmpA domain protein [Geobacter sulfurreducens PCA] gi|298504165|gb|ADI82888.1| OmpA family outer membrane lipoprotein [Geobacter sulfurreducens KN400] Length = 194 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 38/110 (34%), Gaps = 8/110 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 FD + + L + E L +SI GH D N L Sbjct: 87 ERIYFDFDAFVLSQTARDTLSRNAEALLKKMPNAKVSIEGHCDER---GSDEYNLALGEK 143 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 RA +A L+ GV R+S IS + + + NRR + ++ Sbjct: 144 RAKTAMNYLITLGVPAARLSIIS-YGEEKPLDPGHTEEAWAKNRRDEFVI 192 >gi|85059008|ref|YP_454710.1| outer membrane protein A [Sodalis glossinidius str. 'morsitans'] gi|84779528|dbj|BAE74305.1| outer membrane protein A precursor [Sodalis glossinidius str. 'morsitans'] Length = 356 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + PE L ++ L+ + + G+TD + N +LS Sbjct: 228 KSDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GTEQYNQKLS 284 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDIL 337 +RA S L+ G+ D+IS G + +A +RR++I Sbjct: 285 QERAQSVVSYLVSKGIPSDKISA-RGMGKSNPVTGNTCNSVKGRAAVISCLAPDRRVEIE 343 Query: 338 VED 340 V+ Sbjct: 344 VKG 346 >gi|148554094|ref|YP_001261676.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1] gi|148499284|gb|ABQ67538.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1] Length = 295 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 81/300 (27%), Gaps = 25/300 (8%) Query: 47 FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106 F L M ++A P + + + + P+ S+ K Sbjct: 12 FLLAMLAVSA---------AGSL-PAQQQNLNDPNIVVEGVPIPDPSTMTKGPEIKGVIS 61 Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 + +K+ + + + + S + + LT D+ L+ + Sbjct: 62 ARTGNRIKVTAADGTSTIIGISDATRITSAAGLFGSNRGKLTADALLNGLPVTVKTLQPA 121 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + ++ A I + + I Sbjct: 122 EGQYNALVASQVNFRNSDL--------KTATMIRNATDQRFEEQTAATESLRGALGDIDK 173 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNW 285 I FD + E L + + + G+TD++ N Sbjct: 174 YNIKSTTNVHFDTGKTELSAEDKAHLCSTASTAEATENALMLVVGYTDST---GSDDFNQ 230 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 LS RA L ++ G R+ +G A +D + NRR+ + + + Sbjct: 231 ELSEKRANRVINYLQQACGWKPYRMLTPTGMAKADPAATNDTPEGKAQNRRVAVNILVSK 290 >gi|304559160|gb|ADM41824.1| Outer membrane protein [Edwardsiella tarda FL6-60] Length = 152 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F + + PE+ + ++G L+ + G+TD + N +LSL R Sbjct: 45 EKVLFGNNQATLRPESQAHVAELGHALSQVAILHARLDGYTDNY---GTDQYNQQLSLKR 101 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A + G+ ++ G + + NRR+ I+++ Sbjct: 102 ADKVADAMASGGMPRANLTT-RGMGKSNPIADNATRQGRAENRRVAIVIQAP 152 >gi|300771553|ref|ZP_07081428.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761542|gb|EFK58363.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] Length = 650 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 12/116 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +D + +L ++ + + I + HTD+ AR N +LS +R Sbjct: 538 ENIYYDLDKYNIREDAKPILNQLVRTMRDNPSLKIELSSHTDSR---ATARYNMKLSQNR 594 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 A +A ++ G++ DRI G+ +L S+ + ANRR +I V + Sbjct: 595 AQAAVDYIVSRGIARDRIVA-KGYGESKLVNKCADGVQCSEAEHQANRRTEIKVLE 649 >gi|37704676|gb|AAR01610.1| OprF [Pseudomonas sp. MFY315] Length = 316 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + GHT Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 316 >gi|299134179|ref|ZP_07027372.1| peptidoglycan-associated lipoprotein [Afipia sp. 1NLS2] gi|298590926|gb|EFI51128.1| peptidoglycan-associated lipoprotein [Afipia sp. 1NLS2] Length = 162 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + FD + + I L+K + L +I GH D N L R Sbjct: 54 DRVFFDSDQTELSQQAINTLEKQAQWLQQYPRYTFTIEGHADER---GTREYNIALGAKR 110 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A S L+ G+S R+ IS + R +D S NRR Sbjct: 111 AQSVRNFLVSRGISASRMRTIS-YGKERPVAVCNDISCWSQNRR 153 >gi|83943919|ref|ZP_00956376.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. EE-36] gi|83954492|ref|ZP_00963203.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. NAS-14.1] gi|83840776|gb|EAP79947.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. NAS-14.1] gi|83845166|gb|EAP83046.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. EE-36] Length = 174 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F S PE L L +T+ ++ GH D N L R Sbjct: 64 DRVLFLVDQSNLTPEGQATLDGQAAWLNTNTDYQAVIEGHADEQ---GTREYNLALGARR 120 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 A +A + L+ G++ R+ ++ + R + NRR Sbjct: 121 ANAAREYLISRGIAASRL-RVVSYGKERPIEVCSSEACYAKNRR 163 >gi|127511243|ref|YP_001092440.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4] gi|126636538|gb|ABO22181.1| OmpA/MotB domain protein [Shewanella loihica PV-4] Length = 201 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 Q +F S P+ ++ + + +I GH + N LS Sbjct: 73 QELKILFANDSYYIDPQYYDQVEVVATFMRQYPNTKVTIEGHCSKT---GSYEHNLALSQ 129 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 +RA + +L + G++ DR++ I G+++ R + + NRR+ Sbjct: 130 NRADAVTSLLSERFGIASDRLTAI-GYSYDRPVDPTHTKMAHTRNRRV 176 >gi|228018095|gb|ACP52726.1| fibronectin-binding protein [Campylobacter coli] Length = 211 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 123 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRANSV 179 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 + L K GV + RI + G+ + + ++D Sbjct: 180 AKELEKFGVDKSRIQTV-GYGQDKPRSSNDTKE 211 >gi|170717767|ref|YP_001784833.1| OmpA domain-containing protein [Haemophilus somnus 2336] gi|168825896|gb|ACA31267.1| OmpA domain protein transmembrane region-containing protein [Haemophilus somnus 2336] Length = 342 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 16/137 (11%) Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 ++ + + F + PE L + +A +S+ G+TD Sbjct: 210 PVMAPEVVNKVFSLNSDVNFAFAKDTLKPEAQQTLDGVYGEIAQLKTAQVSVAGYTDRI- 268 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMN---- 328 N +LS RA + L+ GV++D IS + G+ S Sbjct: 269 --GSDASNLKLSQRRADTVANYLVSKGVAQDAISAV-GYGEANPVTGMKCDSVKGRKALI 325 Query: 329 ---SANRRIDILVEDRQ 342 + +RR++I V+ + Sbjct: 326 ACLAEDRRVEISVKGSK 342 >gi|323700139|ref|ZP_08112051.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132] gi|323460071|gb|EGB15936.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132] Length = 241 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 68/170 (40%), Gaps = 12/170 (7%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L ++ + +++R++DL + + + + G+ + D+ + Sbjct: 75 ELMEKPWEVLDKQQRIKDLLFPDDILPDEISKAELNDNLDVLAKQDGVALVFTDR---IL 131 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F S ++ ++ ++ + I++ G+TDAS LS DRA + Sbjct: 132 FAPGGSELSDTGKFLMARLVPMMTQTDAPINVAGYTDASDATQTP---LELSGDRALAVL 188 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN----SANRRIDILVEDRQ 342 L+ GV + R +S + I ++ NRR++IL++ + Sbjct: 189 AFLVDKGVHDSRF-SLSAYGDAFPVI-NELGRPVASPRNRRVEILLKTAR 236 >gi|312131594|ref|YP_003998934.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132] gi|311908140|gb|ADQ18581.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132] Length = 765 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 15/164 (9%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID--QRNTPMFDKSSSIP 244 +R L+ S + + ++ + + + I D + +D S Sbjct: 602 ERNYELESEKSGYSKIVENIRSEVRKERKTPQKIHRSTMYKIGDVIRLENIYYDNESYKL 661 Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + L+KIGE+L S E I + HTD A+ N LS RA + L++ Sbjct: 662 GAQAKQSLRKIGELLQKSPELAIEVSSHTDTR---GSAQANMILSERRAEEVKKFLVQY- 717 Query: 304 VSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 +S RIS + G + A +D ++ NRR +I + Sbjct: 718 ISGHRISAV-GKGESQPVNACGDGVQCTDAEHARNRRTEIRILK 760 >gi|158523264|ref|YP_001531134.1| hypothetical protein Dole_3254 [Desulfococcus oleovorans Hxd3] gi|158512090|gb|ABW69057.1| conserved repeat domain [Desulfococcus oleovorans Hxd3] Length = 2118 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 9/119 (7%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNI----ARDN 284 + P+F + ++ + + LA + I + GHTD P R DN Sbjct: 909 EADQRPLFASFGTQLTENDKEQVRALRQSLAGRRIKRIIVTGHTDNQPIRARSRHIFADN 968 Query: 285 WRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 LSL RA S L + +RI G ++ + NRR+ + V Sbjct: 969 DALSLGRAQSVATYLQTILNLPPERIEA-EGKGDREPVASNATEAGRAENRRVAVAVVS 1026 >gi|239905381|ref|YP_002952120.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1] gi|239795245|dbj|BAH74234.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1] Length = 234 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 68/200 (34%), Gaps = 9/200 (4%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 K L+ + K + + K ++A I Sbjct: 25 PQTKQELSLVFQDKNVPSKEKTQNLEKVPTFISPDAIKGSPEFKLSQENKLKYEIAILIK 84 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 ++ GV +++ + ++ N+ MF S+ P ++ + ++L Sbjct: 85 ELITSDQNVKNNSGVSNDSSGVLMQVN-----NSVMFKPGSAEITPAAAKIMDGVAKILR 139 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHR 319 +++RGH D W LS RA +A + L K+G+ R+ + G A + Sbjct: 140 DFKINLTVRGHADDDEGSGPYPSKWELSAARAAAAVRYLSEKAGIPSTRLRAV-GLADSQ 198 Query: 320 LKIASDPMN--SANRRIDIL 337 + S NRRI+ Sbjct: 199 PLVPPTSAENKSRNRRIEFF 218 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 27/61 (44%) Query: 36 VYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQ 95 YADF+T +MAFFL++W++ + TK+ + F ++ + + Sbjct: 2 AYADFVTAMMAFFLLLWLVVSLKPQTKQELSLVFQDKNVPSKEKTQNLEKVPTFISPDAI 61 Query: 96 N 96 Sbjct: 62 K 62 >gi|293611044|ref|ZP_06693343.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826696|gb|EFF85062.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 357 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L I GHTD + + N RLSL RA Sbjct: 238 RVFFDTNKSNIKDQYKPEIAKVAEKLTEYPNATARIEGHTDNT---GPRKLNERLSLARA 294 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 295 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 346 >gi|87121179|ref|ZP_01077070.1| OmpA family protein [Marinomonas sp. MED121] gi|86163671|gb|EAQ64945.1| OmpA family protein [Marinomonas sp. MED121] Length = 201 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +F + ++K+ + L + + GHTD + N +LS RA Sbjct: 77 NILFVSNRFEVRRRYYSEVKKLADFLRKNPSSNVVIEGHTDNT---GHNHHNQQLSQQRA 133 Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334 + +L+K+ +++ R+ I G+ R ++ + NRR+ Sbjct: 134 QAIANILIKTFSIAQSRVKAI-GYGETRPIASNLSAQGKAKNRRV 177 >gi|332532726|ref|ZP_08408600.1| outer membrane protein similar to peptidoglycan-associated (lipo)protein [Pseudoalteromonas haloplanktis ANT/505] gi|332037753|gb|EGI74203.1| outer membrane protein similar to peptidoglycan-associated (lipo)protein [Pseudoalteromonas haloplanktis ANT/505] Length = 351 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++S + + ++K+ L + + GHT A A N LS RA + Sbjct: 241 FPNNASAVSTQYLDDIEKVSAFLKEYPDTTVLLEGHTSAV---GKATYNKWLSKKRADAV 297 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 + L+ G++EDRI+ + G RLK ++ + NRR++ ++ Sbjct: 298 AKQLVADGIAEDRITTV-GLGEERLKNDANTKAANAENRRVEAHIK 342 >gi|171315482|ref|ZP_02904719.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] gi|171099482|gb|EDT44217.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] Length = 170 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD P+ ++++IG L + + + G++D A + LS R Sbjct: 63 GPILFDFDRYNLKPDVRRIVERIGRTLKSAGINGVRVYGYSDDE---GEAAYDLELSRRR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 A L+ +G+ RI + G + + NRR I+V R Sbjct: 120 AEVVAIELVDAGLDGKRI-AVVGKGKSDPVGDNRTPTGRAQNRRAAIVVSPR 170 >gi|163755600|ref|ZP_02162719.1| elongation factor P [Kordia algicida OT-1] gi|161324513|gb|EDP95843.1| elongation factor P [Kordia algicida OT-1] Length = 281 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 48/149 (32%), Gaps = 16/149 (10%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQ--RNTPMFD-KSSSIPLPETIVVLQKIGEV 258 S T + I ID+ + ++ S P+ L Sbjct: 139 EFSEQTNQYDKGFAYKFQTMSEERIEAIDKGIASKVLYAGFGSKTFKPD--NTLNAYAIE 196 Query: 259 LAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 L + T+ + I GHTD+ A N RA S + G++ +++ IS Sbjct: 197 LKNYLAKHPTKHVEIIGHTDS---NGEAEANKWFGQQRAKSVMNYFVSQGIAAEKL-TIS 252 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILVED 340 + NRRI+I V + Sbjct: 253 SKGETDPIAPNTTKEGQRLNRRIEINVTN 281 >gi|90408691|ref|ZP_01216841.1| putative outer membrane protein OmpA [Psychromonas sp. CNPT3] gi|90310205|gb|EAS38340.1| putative outer membrane protein OmpA [Psychromonas sp. CNPT3] Length = 415 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 49/150 (32%), Gaps = 7/150 (4%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 +++L + +S + V + +F +SS Sbjct: 249 QEKLFSAVAISAPLISEPIIAEPVIVTSVPVIAPVFVAKKTYFVTNALFSVNSSQFKTN- 307 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 ++ I + L I I G++D + N +S RA ++ G+S R Sbjct: 308 PDLIDLIMKSLQSKEGNIIITGYSDNL---GSVKYNQWISEKRAKVVANYIISEGISSSR 364 Query: 309 ISKISGFAHHRLKIAS--DPMNSANRRIDI 336 + + ++ + NRR+++ Sbjct: 365 LI-VKSEGEFYPVASNKTATGRAENRRVEL 393 >gi|189219501|ref|YP_001940142.1| Outer membrane protein or related peptidoglycan-associated (lipo)protein [Methylacidiphilum infernorum V4] gi|189186359|gb|ACD83544.1| Outer membrane protein or related peptidoglycan-associated (lipo)protein [Methylacidiphilum infernorum V4] Length = 528 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 45/111 (40%), Gaps = 11/111 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293 F ++ + V +Q++ L+ + + G TD N LSL+RA Sbjct: 423 FRFGTAELDNKGRVDIQRLARFLSEAENSDKGVLLIGFTDNV---GSHTYNLGLSLERAQ 479 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S + L G++ + ++G +++ NRR+++ + ++ Sbjct: 480 SVAKALESRGIT---VVNVAGAGEEMPVASNESEEGREKNRRVEVWLCPKK 527 >gi|85375193|ref|YP_459255.1| hypothetical protein ELI_11830 [Erythrobacter litoralis HTCC2594] gi|84788276|gb|ABC64458.1| hypothetical protein ELI_11830 [Erythrobacter litoralis HTCC2594] Length = 293 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 72/294 (24%), Gaps = 11/294 (3%) Query: 53 IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 ++ T D + D++ + + Sbjct: 2 SLSITTSGKFAVAAAMAAALPLGASAQDYENTDPDRTLTVYATVPADIAEL----PDGPE 57 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 L+ + +K + ++ S SE + D + + Sbjct: 58 LEGYISARKDERMQVTTIGGQQSVVFISEATEIRSRGGFLGLSRTSLGADALMNGLPVKV 117 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 ++ + A I + + A+ I +I Sbjct: 118 ETKQWSDGLIASRVRLSNDDLETATMIRTGTAQGFAEQTAATEALRGRVGDIDNYLIKDT 177 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 FD E L + + + + G+TDA N LS R Sbjct: 178 TNVYFDSGKWRLDGEAQRDLCQAAAQAEATDNALLLVVGYTDAD---GSEELNQELSERR 234 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 A L + G R+ +G A + + NRR+ + + + Sbjct: 235 AARVTNYLQQECGWKPWRMLTPTGMAEADPAADNYTPQGKAQNRRVAVNILVSK 288 >gi|28198797|ref|NP_779111.1| outer membrane protein P6 precursor [Xylella fastidiosa Temecula1] gi|28056888|gb|AAO28760.1| outer membrane protein P6 precursor [Xylella fastidiosa Temecula1] Length = 187 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD E VL + L + I+++G+TD N L Sbjct: 78 RQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDER---GSREYNIALGE 134 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 R S L +G S +++ +S + R S NRR++I+ + Sbjct: 135 RRGNSVLYSLQANGASSGQLNVVS-YGEERPVCTESTESCWSRNRRVEIVYTAK 187 >gi|71901734|ref|ZP_00683806.1| OmpA/MotB [Xylella fastidiosa Ann-1] gi|182681496|ref|YP_001829656.1| peptidoglycan-associated lipoprotein [Xylella fastidiosa M23] gi|71728506|gb|EAO30665.1| OmpA/MotB [Xylella fastidiosa Ann-1] gi|182631606|gb|ACB92382.1| peptidoglycan-associated lipoprotein [Xylella fastidiosa M23] Length = 179 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD E VL + L + I+++G+TD N L Sbjct: 70 RQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDER---GSREYNIALGE 126 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 R S L +G S +++ +S + R S NRR++I+ + Sbjct: 127 RRGNSVLYSLQANGASSGQLNVVS-YGEERPVCTESTESCWSRNRRVEIVYTAK 179 >gi|71275795|ref|ZP_00652079.1| OmpA/MotB [Xylella fastidiosa Dixon] gi|71900394|ref|ZP_00682527.1| OmpA/MotB [Xylella fastidiosa Ann-1] gi|170730225|ref|YP_001775658.1| outer membrane protein P6 [Xylella fastidiosa M12] gi|71163373|gb|EAO13091.1| OmpA/MotB [Xylella fastidiosa Dixon] gi|71729826|gb|EAO31924.1| OmpA/MotB [Xylella fastidiosa Ann-1] gi|167965018|gb|ACA12028.1| outer membrane protein P6 precursor [Xylella fastidiosa M12] Length = 178 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD E VL + L + I+++G+TD N L Sbjct: 69 RQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDER---GSREYNIALGE 125 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 R S L +G S +++ +S + R S NRR++I+ + Sbjct: 126 RRGNSVLYSLQANGASSGQLNVVS-YGEERPVCTESTESCWSRNRRVEIVYTAK 178 >gi|290955106|ref|YP_003486288.1| lipoprotein [Streptomyces scabiei 87.22] gi|260644632|emb|CBG67717.1| putative lipoprotein [Streptomyces scabiei 87.22] Length = 393 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 12/116 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F + P L+ + + L + + GHT + LS RA + Sbjct: 277 FTADDARLAPGADRYLRPVADSLERCGTDVVVTITGHTARV---GAGASGFALSGRRARA 333 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-------NSANRRIDILVEDRQG 343 + L++ GVS I + G R ++ + P NRR++I V ++G Sbjct: 334 VSERLVRLGVSPALIGSVEGVGSTRPRVDNMPGGVFAERLARQNRRVEITVTPKEG 389 >gi|217970007|ref|YP_002355241.1| OmpA/MotB domain protein [Thauera sp. MZ1T] gi|217507334|gb|ACK54345.1| OmpA/MotB domain protein [Thauera sp. MZ1T] Length = 200 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S P L + LA V + + GHTD+ N RLS+ RA + Sbjct: 96 FASGSPAIRPTLGRALDALAPALAAEAGVAVRVVGHTDSQ---GSEMVNLRLSIARAEAV 152 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340 L + G++ DR+ G ++ NRRI++++ Sbjct: 153 VAWLRERGIALDRL-AADGRGEADPLTSNATEEGRVRNRRIELILSR 198 >gi|145297230|ref|YP_001140071.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida A449] gi|142850002|gb|ABO88323.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida A449] Length = 368 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 17/121 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSL 289 + +F+ + + P L + + ++ GHTD N LS Sbjct: 246 SDVLFEFNKATLKPAASHALDTLFSQIVAANPKDGAATVVGHTDRI---GSDAYNQALSE 302 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSA---------NRRIDILVE 339 RA + L+ G+ D++ ++ G ++ S +RR++I +E Sbjct: 303 QRARTVADYLIAKGLFADKV-RVEGRGKSSPVTGNNCTTGSRPALIACLAPDRRVEIHLE 361 Query: 340 D 340 Sbjct: 362 G 362 >gi|120599910|ref|YP_964484.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1] gi|146292153|ref|YP_001182577.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32] gi|120560003|gb|ABM25930.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1] gi|145563843|gb|ABP74778.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32] gi|319425449|gb|ADV53523.1| OmpA/MotB domain protein [Shewanella putrefaciens 200] Length = 366 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 8/131 (6%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 V + + + F S++ ++++ L + E I GH Sbjct: 231 HKVDSVGCTIYENVKNKEDVGSIQFANDSAVVKNVYYKDIERLANYLNKNPEFTVEIAGH 290 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328 N LS RA + +L++ G+S R++ +G+ + +A D Sbjct: 291 ASNV---GKPEYNMVLSDKRADAVANILVEKFGISRSRVTS-NGYGITQPLVAGDSKEAH 346 Query: 329 SANRRIDILVE 339 +ANRRI+ +V Sbjct: 347 AANRRIEAIVT 357 >gi|326794456|ref|YP_004312276.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] gi|326545220|gb|ADZ90440.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] Length = 422 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 82/264 (31%), Gaps = 14/264 (5%) Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS----- 140 P + + ID + + + + +K + ++ +S Sbjct: 154 NSKPKDADNDGVIDQKDQCPNSAPNASVDMSGCEEKATSKPTVVDMPKKVDSDGDGIYDS 213 Query: 141 -EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + C N+ + D ++ P + K + D Sbjct: 214 VDQCPNTPANNEVNDLGCTLPNDNDQDGVLSNLDQCPTTPANTAVDDKGCAVVLDSDNDG 273 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S + + T + + + F +SS E++ VL++ + Sbjct: 274 VMDTSDSCPNTPAGFSVNSEGCTLYDLQTEEVQLEIRFANNSSEVKSESLPVLEEFATAI 333 Query: 260 AHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317 + + ++GH+ A N RLS RA S VL+K GV + G+ Sbjct: 334 NSYDLKNVEVQGHSS---LDGSASYNLRLSEARAQSVADVLVKQFGVDAS-VITAKGYGE 389 Query: 318 HRLKIASDPMNS--ANRRIDILVE 339 + I + NRR+ +++ Sbjct: 390 TQPVINEISNEANTVNRRVVAVIQ 413 >gi|307545157|ref|YP_003897636.1| peptidoglycan-associated lipoprotein [Halomonas elongata DSM 2581] gi|307217181|emb|CBV42451.1| K03640 peptidoglycan-associated lipoprotein [Halomonas elongata DSM 2581] Length = 180 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 + T F S PE VL L ++ + +GHTD N L Sbjct: 74 EVRTIYFAFDSDAIRPEFQSVLNAHARFLRNNPNANVVLQGHTDER---GTREYNLALGE 130 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 RA + + L GVS ++ ++ + R +++ + NRR+ Sbjct: 131 RRAGAVEEFLSVQGVSPSQV-EVVSYGEERPAARGSNEEAYAQNRRVVF 178 >gi|255321572|ref|ZP_05362730.1| putative chemotaxis protein MotB [Campylobacter showae RM3277] gi|255301428|gb|EET80687.1| putative chemotaxis protein MotB [Campylobacter showae RM3277] Length = 355 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 115/339 (33%), Gaps = 35/339 (10%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVM-------WIINATDDDTKKA-IEQYFNPF 72 ++ + ++ I YAD M LM F+++ ++++ +D + + + Sbjct: 2 KTRNENKSGDQTFWISYADLMAGLMFVFMLIIGAVVVKYVLSQSDLAKLQKDLSEREKQI 61 Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 + + + + K + I + ++ G +K + L Sbjct: 62 ASSQSELVRKENVIKEIFSNLDRAKSENKELADINRLVNEMLEGVKKEKNELTNLTQTYE 121 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 N R + G+ L + + ++ + + + + K K ++ Sbjct: 122 INLNDANKTIADLQ-DRVLQLGQILAQKDEALNELSAKYGDEVSRYAALEEDFNKTKDKI 180 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 +D++ + S + + + V + + + + + +FD S E L Sbjct: 181 KDISS-LRSNVISNLRAKLGNKVSIDPSSGVVSL-----PESILFDTGSYELRDEAKARL 234 Query: 253 QK----------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 ++ E +A + I I GHT++ N LS RAYS + Sbjct: 235 KEILQTYFEAILNNEEIAKHIDRIVIEGHTNSI---GSYMYNLDLSQKRAYSVLDFIYSW 291 Query: 303 GVSE--DRISKISGFAHHRLKIAS---DPMNSANRRIDI 336 + + SG + L + + DP S RI+I Sbjct: 292 NKDKRLEHYLIASGRSFSDLVMKNGKEDPDASK--RIEI 328 >gi|15639612|ref|NP_219062.1| hypothetical protein TP0624 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025850|ref|YP_001933622.1| hypothetical protein TPASS_0624 [Treponema pallidum subsp. pallidum SS14] gi|3322920|gb|AAC65597.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018425|gb|ACD71043.1| hypothetical protein TPASS_0624 [Treponema pallidum subsp. pallidum SS14] gi|291059994|gb|ADD72729.1| OmpA family protein [Treponema pallidum subsp. pallidum str. Chicago] Length = 476 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 12/144 (8%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + + D GV + + I++ D R F +S L + I L Sbjct: 341 DVKRFLTDERSPGVGVRSGINTLKITVYDVR----FVANSPEILASEKDRVDVIATALKK 396 Query: 262 S--TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 I GHT LS+ RA Q L + G+ RI+ G + Sbjct: 397 MGPYTRFLIEGHTADLHRPQEEA---ALSVARAQRMAQELSRRGIEMTRITTA-GHGATK 452 Query: 320 LKIASDPMN--SANRRIDILVEDR 341 SD + NRR++I + Sbjct: 453 PIAPSDTHANKAKNRRVEITILRD 476 >gi|315078400|gb|EFT50431.1| OmpA family protein [Propionibacterium acnes HL053PA2] Length = 368 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 14/118 (11%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287 D + +FD S + P ++ + + L + I + G+TD+ A N L Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313 Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 S RA S + L + G++ +G ++D NRR+ I V++ Sbjct: 314 SRRRAASVAKGLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 367 >gi|310778685|ref|YP_003967018.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926] gi|309748008|gb|ADO82670.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926] Length = 342 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 7/105 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +F +S + + +I +VL ++I G+TD++ A+ N LS RA + Sbjct: 237 LFSVNSYEVTGAGLAEIDEISQVLEGHKGTLTIEGNTDST---GAAKYNMMLSEKRAEAV 293 Query: 296 YQVLMKSGVSEDRISKIS-GFAHHRLKIASDPMNSA--NRRIDIL 337 V + + I +S GF + + + NRR+++ Sbjct: 294 ANVFKAR-LEGEEIEIVSKGFGEENPLVPNTTPEAKAQNRRVEVF 337 >gi|114047938|ref|YP_738488.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7] gi|113889380|gb|ABI43431.1| OmpA/MotB domain protein [Shewanella sp. MR-7] Length = 290 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +D+ + + L +I E L++ +V + + +TD+ N ++S RA S Sbjct: 184 YDEGGTDLTRFSQQQLSRIQEYLSYDPDVELVLVDAYTDSY---GGRSVNQKVSDKRAES 240 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + SG+ +DRI + G R ++D + NRR+ I + Sbjct: 241 VKDFFVASGIPQDRIVTV-GHGERRHVASNDDIEERALNRRVVIRISKP 288 >gi|212636483|ref|YP_002313008.1| OmpA protein [Shewanella piezotolerans WP3] gi|212557967|gb|ACJ30421.1| OmpA [Shewanella piezotolerans WP3] Length = 364 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+I + ++ + E ++ + I GH + A N LS RA + Sbjct: 253 FATNSAIVQESSYSDIKDLAEYMSKHPNSEVVIAGHASNT---GAADYNMALSERRAIAV 309 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRID 335 VL+ + G++ R+S G+ + I + ANRRI+ Sbjct: 310 ADVLINEYGIAPARVSS-KGYGITQPLIEGSSKEANQANRRIE 351 >gi|77359154|ref|YP_338729.1| hypothetical protein PSHAa0183 [Pseudoalteromonas haloplanktis TAC125] gi|76874065|emb|CAI85286.1| putative outer membrane protein; signal peptide [Pseudoalteromonas haloplanktis TAC125] Length = 354 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 8/174 (4%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + + P+ + + I + V + Sbjct: 177 GQSSVAEEPVQPAPEPVIVEVAPVDSDNDNIPDADDQCPNTPMTDAVDGTGCTLYEDKEV 236 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRL 287 F ++S + + + K+ E L + + GHT + A N L Sbjct: 237 TVSL-LVTFPNNTSAVSTQYLNDIDKVAEFLKEYPDTTVLLEGHTSSV---GKASYNKWL 292 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339 S RA + + L+ GV+EDRI+ + G RLK ++ + NRR++ ++ Sbjct: 293 SKKRADAVAKKLVADGVAEDRITTV-GLGEERLKNEANTKAAHEENRRVEAHIK 345 >gi|50120684|ref|YP_049851.1| outer membrane protein A [Pectobacterium atrosepticum SCRI1043] gi|49611210|emb|CAG74656.1| outer-membrane protein A [Pectobacterium atrosepticum SCRI1043] Length = 366 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L+ + + G TD + N LS Sbjct: 238 KSDVLFNFNKATLKPEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRL---GSEQYNQALS 294 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +++S G + + +A +RR++I Sbjct: 295 EKRAQSVVDYLVSKGIPANKVSA-RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIE 353 Query: 338 VED 340 V+ Sbjct: 354 VKG 356 >gi|127512084|ref|YP_001093281.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4] gi|126637379|gb|ABO23022.1| OmpA/MotB domain protein [Shewanella loihica PV-4] Length = 234 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 10/179 (5%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 ++ + + + +L + E + I Sbjct: 63 PHSRPNAVVDAKGCEIRRGEIACIAPEGELLSFCEPAAQKAQYGQARQNKQDEQVKRSI- 121 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 F +S+ + L K+ + L+ S +++ GHTD N Sbjct: 122 --GESNVVRVYFAFASAEVSIDQWPQLAKVRDFLSASDARLTLVGHTDNI---GSEAVNL 176 Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 LS RA Q+ + GV +R+S ++ + + + NRR++ +VE R Sbjct: 177 SLSRQRAERVKQIFVQDYGVKAERLSIVA-KGASQPVTDNFGPGERALNRRVEFIVEAR 234 >gi|254462893|ref|ZP_05076309.1| OmpA family protein [Rhodobacterales bacterium HTCC2083] gi|206679482|gb|EDZ43969.1| OmpA family protein [Rhodobacteraceae bacterium HTCC2083] Length = 219 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ L++ + E + GH DA N L L RAY+ Sbjct: 81 FAFGSAQLDAGAHDTLREQAAWIRQFPEVRFRVYGHADAV---GGNASNKSLGLQRAYAV 137 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L +G+ + R+ +S F + I S+ NRR Sbjct: 138 VNFLAANGIGKSRLEAVSSFGEEQPLIVSEGRERRNRR 175 >gi|88810551|ref|ZP_01125808.1| OmpA/MotB [Nitrococcus mobilis Nb-231] gi|88792181|gb|EAR23291.1| OmpA/MotB [Nitrococcus mobilis Nb-231] Length = 147 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S++ E + +L+ GE L+ ++I GHTD N L RA + Sbjct: 45 FDFDSNVVKSEYMPILKAHGEYLSTHPENQVTIEGHTDER---GSREYNLALGERRAKAV 101 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 ++L +G ++++IS +S + + + NRR I+ Sbjct: 102 QRILELNGAAKEQISTVS-YGEEKPLDPGHTEAALTKNRRALIV 144 >gi|258627656|ref|ZP_05722431.1| Outer membrane protein A [Vibrio mimicus VM603] gi|258580055|gb|EEW05029.1| Outer membrane protein A [Vibrio mimicus VM603] Length = 194 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 12/160 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++ + + L+ + L + N + + I + +NT FD Sbjct: 37 APQLNSAGVQGPLKQVRTSSYEALRQFLLSNGIDHEIMPGDYPMIKL-----KNTIKFDT 91 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S+ ++ L ++ + LA + + + GHTD + + N LS RA S Sbjct: 92 GSAKVSVQSKQWLDRMAQFLASESGIDIVLEGHTDNT---GTQKFNDSLSEKRASSVKTA 148 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 L++ V+++ I G+ H + + NRR+++ Sbjct: 149 LVQRQVAQNAIYT-RGYGEHVPACTNKTKNGRACNRRVEV 187 >gi|37704636|gb|AAR01590.1| OprF [Pseudomonas sp. MFY80] gi|37704642|gb|AAR01593.1| OprF [Pseudomonas sp. MFY106] gi|37704646|gb|AAR01595.1| OprF [Pseudomonas sp. MFY116] gi|37704648|gb|AAR01596.1| OprF [Pseudomonas sp. MFY122] Length = 316 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + GHT Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 316 >gi|313675340|ref|YP_004053336.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312942038|gb|ADR21228.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 745 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289 FD S + L KI EV+ + ++ I + HTDA N RLS Sbjct: 631 DIQPIYFDLGKSEIRKDAAKELDKIVEVMKANPKMVIELGSHTDAR---GSDAFNLRLSD 687 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 RA ++ ++ G+ EDRI G+ +L S+ + NRR + V Sbjct: 688 KRAKASAAYIVSQGIDEDRI-SGKGYGETQLINDCGNGVNCSEEEHQLNRRTEFKVLK 744 >gi|85713385|ref|ZP_01044392.1| Peptidoglycan-associated lipoprotein [Idiomarina baltica OS145] gi|85692791|gb|EAQ30782.1| Peptidoglycan-associated lipoprotein [Idiomarina baltica OS145] Length = 180 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 48/148 (32%), Gaps = 7/148 (4%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 Q+ + S V + + + + F S E +L Sbjct: 36 QETGQTTESGSQSGVQVGAADRAKTPEEVREEQMEALRKEHIIYFAFDRSSVQSEYAELL 95 Query: 253 QKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + L + V + GH D N L RA + L+ GV + +IS Sbjct: 96 AAHADYLVKNPNVTIVIEGHADER---GTPEYNIALGERRAKAVEDYLVNLGVQDSQIST 152 Query: 312 ISGFAHHRLK--IASDPMNSANRRIDIL 337 +S + + +++ + NRR ++ Sbjct: 153 VS-YGEEKPLVNASNERAYAKNRRAVLV 179 >gi|322834544|ref|YP_004214571.1| OmpA/MotB domain protein [Rahnella sp. Y9602] gi|321169745|gb|ADW75444.1| OmpA/MotB domain protein [Rahnella sp. Y9602] Length = 165 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 +F + + E+ ++K+ L H +++ GHTD A N LSL Sbjct: 58 DAKVLFGNNQATLSTESKQSVEKLASELLHVGLNKVNLDGHTDNY---GDAGYNNDLSLR 114 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + +G+ I G + ++ + NRR+ +++ Sbjct: 115 RANTVAAAFADAGMPRANIHT-RGLGQSQPVASNKTQAGRAQNRRVSVII 163 >gi|170693360|ref|ZP_02884520.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] gi|170141890|gb|EDT10058.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] Length = 230 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 7/128 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 LS L + + T G+ I+I + +F+ + LPE+ VL +I VL Sbjct: 91 QLLSLLAPLQDNRQITISHTPQGVEIAINAK---VLFNSGDARLLPESFAVLDRIAAVLR 147 Query: 261 HS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I + GHTD+ P NW LS RA + + G+ R++ I G A + Sbjct: 148 DRAKNNILVEGHTDSLPIATAKYESNWELSSARAGAVVRFFADKGIEAHRMAAI-GRADN 206 Query: 319 RL-KIASD 325 I +D Sbjct: 207 FPLIIGND 214 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 20/54 (37%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 D+ W I YAD +T LM FL ++++ + + P Sbjct: 17 HDDGQDSGEQSDRWLISYADLITTLMVLFLALYVLQLAKNSELQIQTLQHRPVK 70 >gi|148553776|ref|YP_001261358.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1] gi|148498966|gb|ABQ67220.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1] Length = 373 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 FD S E +L A + + + + GH D + N LS Sbjct: 264 PFIVFFDWDKSDITAEAASILDNAANAYATTGQARVQLAGHADK---SGSDQYNVGLSQR 320 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 RA + L GV + I+ F R + + NRR++I Sbjct: 321 RADAVKAYLAGKGVPDSAITT-EAFGESRPLVDTADGVREPQNRRVEIT 368 >gi|269139251|ref|YP_003295952.1| OmpA/MotB domain protein [Edwardsiella tarda EIB202] gi|267984912|gb|ACY84741.1| OmpA/MotB domain protein [Edwardsiella tarda EIB202] Length = 162 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F + + PE+ + ++G L+ + G+TD + N +LSL R Sbjct: 55 EKVLFGNNQATLRPESQAHVAELGHALSQVAILHARLDGYTDNY---GTDQYNQQLSLKR 111 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A + G+ ++ G + + NRR+ I+++ Sbjct: 112 ADKVADAMASGGMPRANLTT-RGMGKSNPIADNATRQGRAENRRVAIVIQAP 162 >gi|37679816|ref|NP_934425.1| outer membrane protein [Vibrio vulnificus YJ016] gi|37198561|dbj|BAC94396.1| outer membrane protein [Vibrio vulnificus YJ016] Length = 348 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 9/158 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLP 246 ++KRL L +++ LS + + I+ + D N F +S+ P Sbjct: 183 QRKRLHQLEQQLDYVLS-HTRCVPPRDEDAFRFQLDIVNELYDILNIDNQFAVNSAEINP 241 Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + + L K +L T +++ GH DA+ N +L++DRA + L G+ Sbjct: 242 KYMGHLAKAANILREHTALTLTVTGHADAT---GNEAYNEKLAMDRAEQVKRYLAIFGLD 298 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 +RI+ S + NRR+ I ++ Sbjct: 299 PNRITTYS-LGEKLPLFDGESAAVRLTNRRVSIEIQSP 335 >gi|313672972|ref|YP_004051083.1| ompa/motb domain protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939728|gb|ADR18920.1| OmpA/MotB domain protein [Calditerrivibrio nitroreducens DSM 19672] Length = 201 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 6/106 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S E+I + ++I + + + I GHTD+ N+ L L RA S Sbjct: 99 FETGSDQLTEESINMTKEIINEIKNRENPELEIIGHTDSV---GEKEANYLLGLKRAESV 155 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339 +L GV ++S I + NRR++++V+ Sbjct: 156 KNILTSQGVDTGMEIELSSLGEDNPLIPMPDETPEPKNRRVEVVVK 201 >gi|254481114|ref|ZP_05094360.1| OmpA family protein [marine gamma proteobacterium HTCC2148] gi|214038909|gb|EEB79570.1| OmpA family protein [marine gamma proteobacterium HTCC2148] Length = 209 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 61/191 (31%), Gaps = 18/191 (9%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 + + ++ L+D + + L + + + Sbjct: 26 DPARPDDPEAHLAAQKALTDIRRFHGDVRELPGLKDSGLVLQENIEDL--QQALATLNAK 83 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277 I IS+ +FD PE L+ + VL + + I GHTDA Sbjct: 84 VLDQEIQISLSADL---LFDFDQYQVKPEADAELRTLTTVLLETGSAQVRIVGHTDAL-- 138 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASD--------PMN 328 N RLS RA S + L+ G + D + G + Sbjct: 139 -GSETYNQRLSEQRAESIKRWLLGPGHIGSDVTIETMGKGESEPVAPNSNIDGSDNVDGR 197 Query: 329 SANRRIDILVE 339 + NRR++++++ Sbjct: 198 ALNRRVELVIQ 208 >gi|291276590|ref|YP_003516362.1| putative flagellar motor protein [Helicobacter mustelae 12198] gi|290963784|emb|CBG39619.1| putative flagellar motor protein [Helicobacter mustelae 12198] Length = 258 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 78/208 (37%), Gaps = 11/208 (5%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 S K + + + +T ++I P + ++ QD Sbjct: 36 AISAQNKAKVEALKTEFIKIFDATPKPETIQPVTRIPPNPGDVTDQEDGDKAQQSQDSNA 95 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP-LPETIVVLQKIG 256 + + I +G + E GI + + +FD S+ E L+ + Sbjct: 96 VKTVENIVQLEQIIQEGGVLEQIEHGITLQLPSDL---LFDNGSAELANDEMKDYLRNMA 152 Query: 257 EVLAHSTEVISIR--GHTDA--SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 V+ +SI G+TD P + ++++ L+ RA + VL++ GV++ ++ Sbjct: 153 NVIKKFPPQVSINVKGYTDNAPLPPNSPYKNHYLLAAARAMAVMNVLIQQGVNQKQL-SF 211 Query: 313 SGFAHHRLKIASDP--MNSANRRIDILV 338 + + + ++ + N R++I + Sbjct: 212 TSYGKNSPIAPNNTPANRAKNNRVEIYL 239 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 49/159 (30%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K A W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKAKKQECPAGEKWAVPYADFLSLLLALFIALYAISAQNKAKVEALKTEFIKIFDATPKP 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + PP + +++S +K + + E + Sbjct: 63 ETIQPVTRIPPNPGDVTDQEDGDKAQQSQDSNAVKTVENIVQLEQIIQEGGVLEQIEHGI 122 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178 + + L D+ + PP Sbjct: 123 TLQLPSDLLFDNGSAELANDEMKDYLRNMANVIKKFPPQ 161 >gi|15838494|ref|NP_299182.1| outer membrane protein P6 precursor [Xylella fastidiosa 9a5c] gi|9106989|gb|AAF84702.1|AE004009_9 outer membrane protein P6 precursor [Xylella fastidiosa 9a5c] Length = 186 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD E VL + L + I+++G+TD N L Sbjct: 77 RQRVVYFDFDKDDVKKEFQTVLGCHAKYLRNRPSAHITLQGNTDER---GSREYNIALGE 133 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 R S L +G S +++ +S + R S NRR++I+ + Sbjct: 134 RRGNSVLYSLQANGASSGQLNVVS-YGEERPVCTESTESCWSRNRRVEIVYTAK 186 >gi|307579950|gb|ADN63919.1| outer membrane protein P6 precursor [Xylella fastidiosa subsp. fastidiosa GB514] Length = 149 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD E VL + L + I+++G+TD N L Sbjct: 40 RQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDER---GSREYNIALGE 96 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 R S L +G S +++ +S + R S NRR++I+ + Sbjct: 97 RRGNSVLYSLQANGASSGQLNVVS-YGEERPVCTESTESCWSRNRRVEIVYTAK 149 >gi|269122521|ref|YP_003310698.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386] gi|268616399|gb|ACZ10767.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386] Length = 358 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 14/139 (10%) Query: 213 KGVLFETTRTGILISIIDQRNTPM-----FDKSSSIPLPETIVVLQKIGEVLAH---STE 264 K V + +I + + M F +P L+ I +L Sbjct: 211 KYVEKQVPVNTTVIDLNCRAAQKMCIINGFKVDGKVPNEAEQRDLRTIANILNAAVVDGG 270 Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED-RISKISGFAHHRLKIA 323 I++ GHTD++ A N +LS++RA + ++L + G+ + I+G + Sbjct: 271 TINVVGHTDST---GSAAYNQKLSVERAQNVARLLREYGLKNTVKFGTITGKGLTQPMAT 327 Query: 324 SDPMNSA--NRRIDILVED 340 ++ + NRR+++ + Sbjct: 328 NNTVEGRYQNRRVELFFDR 346 >gi|189346279|ref|YP_001942808.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245] gi|189340426|gb|ACD89829.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245] Length = 153 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 FD S E + LQK + + + + + GH D N L R Sbjct: 46 GDIFFDYDKSELRAEAVEQLQKNFDWMKQNPAGTLIVEGHCDER---GTNEYNMALGERR 102 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A +A ++ G R+ +S + R + + NRR Sbjct: 103 ANAAKDYMVNVGADPARMQTVS-YGEERPFALGHDEASWAQNRR 145 >gi|262394300|ref|YP_003286154.1| outer membrane protein [Vibrio sp. Ex25] gi|262337894|gb|ACY51689.1| outer membrane protein [Vibrio sp. Ex25] Length = 272 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLP 246 +++RL L +++ LS + + ++ I N F S+ P Sbjct: 102 QRRRLNQLEQQLDYVLSQ-TTCTPPDDIEALRSDLNVVAEIYALLNIDNQFAVDSAEINP 160 Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + + L + +L + + GH D N +L+ RA + L G++ Sbjct: 161 KYMGHLAEAAYILRDHPNLTLVVTGHAD---VTGAPDYNQKLAQARAEQVKRYLTVFGIT 217 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +R++ + NRR+ I V Sbjct: 218 SERVTT-KSVGDSLPLYEGETPAVRLTNRRVSIEVISPN 255 >gi|107100572|ref|ZP_01364490.1| hypothetical protein PaerPA_01001597 [Pseudomonas aeruginosa PACS2] gi|313106086|ref|ZP_07792343.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] gi|310878845|gb|EFQ37439.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] Length = 158 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + P++ L KI +LA + + + GHTD N +LS R Sbjct: 51 SKVLFGNNLDRLNPDSRNTLTKIAHALLAVDIDKVRLEGHTDNY---GDEGYNQKLSERR 107 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A S V ++G+ I ++ G + + NRR+ I+V Sbjct: 108 AESVAAVFREAGMPAANI-EVRGLGMSKPVADNKTRAGRSENRRVAIIV 155 >gi|86748026|ref|YP_484522.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] gi|86571054|gb|ABD05611.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] Length = 208 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 74/201 (36%), Gaps = 17/201 (8%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 L S ++ ++ +++ S A L + + Sbjct: 11 ALAAVVLVGGSGISMTAAEAGEVSSQQIRDQLKTSKTRSLSGTRAAMSPDDLATIKRVSR 70 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + + + + I+ FD +S+ P L+ +G+ L Sbjct: 71 TRSLSAGDREQIAAIAAKRPTIDLEIN---------FDYNSATLSPRAEPQLKSLGDALT 121 Query: 261 HS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316 S ++ + GHTDA + N LS RA + + L++ + D + + G+ Sbjct: 122 SSDLKNSIVMLAGHTDA---KGGDDYNQSLSERRAEAVKRYLIERYRIQPDNLVAV-GYG 177 Query: 317 HHRLKIASDPMNSANRRIDIL 337 +LK +++P+ + NRR+ I+ Sbjct: 178 EKQLKSSAEPLAAENRRVQIV 198 >gi|119468232|ref|ZP_01611358.1| putative outer membrane protein; signal peptide [Alteromonadales bacterium TW-7] gi|119448225|gb|EAW29489.1| putative outer membrane protein; signal peptide [Alteromonadales bacterium TW-7] Length = 351 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + + + ++ L + + GHT A A N LS RA S Sbjct: 241 FPNDKAAVSQRYLDDIDQVASFLKDYPDTTVLLEGHTSAV---GKATYNKMLSKKRADSV 297 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 + L+ G++ DRI+ + G RLK ++ + NRR++ ++ Sbjct: 298 AKQLIADGIASDRITTV-GLGEERLKNEANTAAAHAENRRVEAHIK 342 >gi|209886401|ref|YP_002290258.1| OmpA/MotB domain protein [Oligotropha carboxidovorans OM5] gi|209874597|gb|ACI94393.1| OmpA/MotB domain protein [Oligotropha carboxidovorans OM5] Length = 160 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + + I L+K + L +I GH D N L R Sbjct: 52 DRVFFESDQTELSQQAINTLEKQAQWLQQYPRYTFTIEGHADER---GTREYNIALGAKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A S L G++ R+ IS + R +D S NRR Sbjct: 109 AQSVRNFLASRGINPSRMRTIS-YGKERPVAVCNDISCWSQNRR 151 >gi|116329523|ref|YP_799243.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329838|ref|YP_799556.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122267|gb|ABJ80310.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123527|gb|ABJ74798.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 684 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 92/285 (32%), Gaps = 16/285 (5%) Query: 55 NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE--RSSQNKIDLSIDEHITKNSVD 112 + S F Q R + K ++ Sbjct: 406 GDLTKGKLSNFATTLQTGRVYKVEISSPGFHPQEDILDLRGNIGKNRKIYRTYVLLPIQI 465 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + + K + + ++ + D++ + E + +++ Sbjct: 466 GEGKAEETKTEPADNQKPSSAAMKVIVADASTKQVIPDAKVTLFTPTNRKGESLVTDKKS 525 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + + L + K IS +++ + + G++ R ++ I Sbjct: 526 FLINRLPESDFELFATAP------KYISESINIIQKNIPKNGIVTIYLRAENDVNPIYNL 579 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 F+ + + E +L + + L ++++ I I GHTD N RLS R Sbjct: 580 R-VYFEFNKTKITNENKKLLDPLVDYLLKNASDKIEIGGHTDNV---ASKEYNTRLSAKR 635 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 A + Y+ + G+SE R+ I + + + ++ + NRR+ Sbjct: 636 ARNVYEYFLSKGISEKRMK-IRAYWYSQPDADNETEIGRAKNRRV 679 >gi|83943938|ref|ZP_00956395.1| OmpA family protein [Sulfitobacter sp. EE-36] gi|83845185|gb|EAP83065.1| OmpA family protein [Sulfitobacter sp. EE-36] Length = 234 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 4/103 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 +T F +S+ VL++ + E + GHTDA N L L Sbjct: 85 ESTVTFAFNSAQLDGAAQAVLRRQAGWIRQFPEVRFRVYGHTDAV---GSNSYNKALGLR 141 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 RA S L G+S R+ + F + I + ANRR Sbjct: 142 RAQSVVAFLSTQGISRSRLEAVVSFGETQPLIVTQGRERANRR 184 >gi|298529977|ref|ZP_07017379.1| peptidoglycan-associated lipoprotein [Desulfonatronospira thiodismutans ASO3-1] gi|298509351|gb|EFI33255.1| peptidoglycan-associated lipoprotein [Desulfonatronospira thiodismutans ASO3-1] Length = 200 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S + LQKI E + E + I GHTD A N L RA +A Sbjct: 98 FAFDSYELDADARSALQKISEHMKRFDELRLVIEGHTDER---GTAEYNLALGERRARAA 154 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340 Y+ L+ GVS DR+ IS + + +++ + NRR + V D Sbjct: 155 YEFLVLLGVSSDRLQIIS-YGEENPLVDESNESAWAQNRRAEFKVLD 200 >gi|91216576|ref|ZP_01253542.1| OmpA family protein [Psychroflexus torquis ATCC 700755] gi|91185370|gb|EAS71747.1| OmpA family protein [Psychroflexus torquis ATCC 700755] Length = 759 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 13/115 (11%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD P+ V LQKI + I +R HTD+ N LS RA + Sbjct: 547 FDLDKFQIRPDAEVELQKIIVAMKSYPNLRIDVRSHTDSR---AGDEYNQILSNKRAKAT 603 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDRQ 342 +++ G+S +RI G+ +L S+ ++ NRR + ++ Sbjct: 604 INYIIEKSGISSERI-SGRGYGESQLVNKCSNGIDCSESEHALNRRAEFIILKPN 657 >gi|189346280|ref|YP_001942809.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245] gi|189340427|gb|ACD89830.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245] Length = 169 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 FD SSI E L + L + + GH D + N L R Sbjct: 64 GDVFFDYDSSILATEAQNRLTQNAAWLKSNAGKSVVIEGHCDDR---GTSEYNIALGERR 120 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 A +A + + + GVS R+ ++ + R ++ + NRR +V+ Sbjct: 121 AVTAKEFIARLGVSASRLETVT-YGEERPFDKGQNEEAWAKNRRAHFVVK 169 >gi|114777571|ref|ZP_01452552.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1] gi|114552042|gb|EAU54559.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1] Length = 258 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 74/246 (30%), Gaps = 18/246 (7%) Query: 99 DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158 D+ G+ + ++ L++ K S G Sbjct: 1 MAKRDKKPAPLPFPSDPGAALFLELMMQMLAFFILLTSYAVIVDDKRLAAIGSLAGTFSP 60 Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 K + + K L D+AK++ + + Sbjct: 61 MPRGANLDEGKGPALPTRSIVDGSTAPKRTAKELTDIAKELGQGDAIEI---------MP 111 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF 277 ++ + I F P+ ++ K+ + I I GHTDA+P Sbjct: 112 LDKSSLRIRF---PEHIAFAAGHVDLSPKARTLIDKLAIIFQKPEVTEIQIEGHTDATPT 168 Query: 278 RNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 +N NW LS RA + + L + GV R+ G P S RR+DI Sbjct: 169 KNSDYPSNWELSAARAMAVFHELAEQGVPRGRMIAA-GMGDQHPI-KGHPELS--RRVDI 224 Query: 337 LVEDRQ 342 ++ R Sbjct: 225 TLKFRP 230 >gi|260221771|emb|CBA30668.1| hypothetical protein Csp_C24700 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 214 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 10/172 (5%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 F+ L ++ M L+ KK +A + ++ R + I Sbjct: 31 AFVLILVGVLVVQMDLVANLESEVKKRQQEEQRRMALEKALAIPLQSGRVTLNNGRIGIS 90 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA----HSTEVISIRGHTDASPFRNI---ARDNW 285 + +F +S + +L+ + L E++ + G TD DN Sbjct: 91 GSVLFAVNSDQLRADGRQLLKSLVPPLQVYLGERDEMLMVSGFTDNVAVSGANRHFADNL 150 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRID 335 LS R+ + + L++ G+ R+ + F + + ++ + NRR++ Sbjct: 151 ELSAQRSLTVTRALIEEGMPASRVFAAA-FGAQQPVASNQNESGRALNRRVE 201 >gi|37704658|gb|AAR01601.1| OprF [Pseudomonas sp. MFY152] gi|37704674|gb|AAR01609.1| OprF [Pseudomonas sp. MFY314] Length = 316 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + GHT Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 316 >gi|292487869|ref|YP_003530744.1| outer membrane protein A [Erwinia amylovora CFBP1430] gi|292899094|ref|YP_003538463.1| outer membrane protein A [Erwinia amylovora ATCC 49946] gi|291198942|emb|CBJ46052.1| outer membrane protein A [Erwinia amylovora ATCC 49946] gi|291553291|emb|CBA20336.1| Outer membrane protein A precursor [Erwinia amylovora CFBP1430] gi|312171991|emb|CBX80248.1| Outer membrane protein A precursor [Erwinia amylovora ATCC BAA-2158] Length = 355 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L++ + + G+TD + N +LS Sbjct: 227 KSDVLFTFNKSTLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRI---GSEQYNQKLS 283 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337 RA S L+ G+ ++IS G + D + +RR++I Sbjct: 284 EKRAQSVVDYLVSKGIPSNKISA-RGEGKSNPVTGNTCDSVKGRKALIDCLAPDRRVEIQ 342 Query: 338 VED 340 V+ Sbjct: 343 VKG 345 >gi|256830501|ref|YP_003159229.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256579677|gb|ACU90813.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028] Length = 260 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 65/153 (42%), Gaps = 16/153 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + + ++ K + FE+ R +SI +F S+ +L ++ V+ S Sbjct: 74 VRDHLWEDPDKDLRFESNRFMQRLSIGAD---ALFAPGSADLTAGGRSLLDRLRPVVMES 130 Query: 263 TEVISIRGHTDASPFRNIARD----------NWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + + + GHT +W LSL R + Y+ +++GV +++ ++ Sbjct: 131 SHPLGLSGHTSEGMDEFGPDYLAKPWIKVDFSWELSLARVMAVYKYFIETGVEPEKL-RL 189 Query: 313 SGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 F R ++ ++ NRR++I ++ R G Sbjct: 190 EAFGRFRPRLTTEAPGERQTNRRVEITLDRRVG 222 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 16/101 (15%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 I ++D +T++M FF+V+ + + D K+ + I Sbjct: 1 MITFSDLVTLMMTFFIVLVSMASLTDIYKRKVA----------------IGSVSGTFGTG 44 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + + DL+ + T+ + L + Sbjct: 45 APSMNDLTTVDTRTQVDPGPINVFKDLSPVRDHLWEDPDKD 85 >gi|148258086|ref|YP_001242671.1| outer membrane lipoprotein omp16 [Bradyrhizobium sp. BTAi1] gi|146410259|gb|ABQ38765.1| Outer membrane lipoprotein omp16 precursor (peptidoglycan-associated lipoprotein) [Bradyrhizobium sp. BTAi1] Length = 149 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + P+ I L+K + L +I GH D N L R Sbjct: 41 DRVFFESDQTDLTPQAIATLEKQAQWLQTYPRYSFTIEGHADER---GTREYNIALGARR 97 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A S L+ G+ + R+ IS + R +D S NRR Sbjct: 98 AQSVRNFLVSRGIDQGRMRTIS-YGKERPVAVCNDISCWSQNRR 140 >gi|116049050|ref|YP_792148.1| hypothetical protein PA14_49900 [Pseudomonas aeruginosa UCBPP-PA14] gi|115584271|gb|ABJ10286.1| probable outer membrane protein precursor [Pseudomonas aeruginosa UCBPP-PA14] Length = 168 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + P++ L KI +LA + + + GHTD N +LS R Sbjct: 61 SKVLFGNNLDRLNPDSRNTLTKIAHALLAVDIDKVRLEGHTDNY---GDEGYNQKLSERR 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A S V ++G+ I ++ G + + NRR+ I+V Sbjct: 118 AESVAAVFREAGMPAANI-EVRGLGMSKPVADNKTRAGRSENRRVAIIV 165 >gi|49081488|gb|AAT50144.1| PA1119 [synthetic construct] Length = 169 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + P++ L KI L + + GHTD N +LS R Sbjct: 61 SKVLFGNNLDRLNPDSRNTLTKIARALLAVDIGKVRLEGHTDNY---GDEGYNQKLSERR 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A S V ++G+ I ++ G + + NRR+ I+V Sbjct: 118 AESVAAVFREAGMPAANI-EVRGLGMSKPVADNKTRAGRSENRRVAIIV 165 >gi|325067558|ref|ZP_08126231.1| OmpA/MotB domain protein [Actinomyces oris K20] Length = 394 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 40/114 (35%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLD 290 F S + VL + E + ++I GHTD N LS Sbjct: 109 GDVTFATDSDQLSDQADGVLANVVEQIKKFPSGGDLTITGHTDDV---ADDAHNQDLSER 165 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA + + L K +SG ++ +D ANRR++I + + Sbjct: 166 RAKAVSERLKKLTDLSKWKESVSGKGESSPRVPNDSDEHRQANRRVEITLMPSK 219 >gi|37704638|gb|AAR01591.1| OprF [Pseudomonas sp. MFY81] gi|37704640|gb|AAR01592.1| OprF [Pseudomonas sp. MFY82] Length = 316 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + GHT Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 316 >gi|298208372|ref|YP_003716551.1| putative outer membrane protein [Croceibacter atlanticus HTCC2559] gi|83848293|gb|EAP86163.1| putative outer membrane protein [Croceibacter atlanticus HTCC2559] Length = 332 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 7/115 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 S+ ++ F + + P ++ L SI GHTD F DN Sbjct: 221 SVTNKTLYSSFAQQNFKPDATLKSYALELKSYLQKHPNKRVSIVGHTD---FVGEEEDNL 277 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + RA + L+ G+ ++++ S K + + NRRI+I V Sbjct: 278 WIGEQRAKLVMKYLISIGIDANKMTA-SSKGESDPKFPNTTDANRAKNRRIEIKV 331 >gi|327399144|ref|YP_004340013.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411] gi|327181773|gb|AEA33954.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411] Length = 188 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 15/116 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGE---------VLAHSTEVISIRGHTDASPFRNIARDNWRL 287 F +S P + + + +L H T + I G+ D N L Sbjct: 77 FKFNSFEIEPINQYGINEKPKAILDRIAAFMLKHPTLKVRIEGNCDER---GTVEYNLAL 133 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 RA +A + L+ GV+ DRI IS + R ++ + NRR ++ +R Sbjct: 134 GQKRALAAKKYLVAKGVNPDRIDIIS-YGESRPLDPAHNEYAWAKNRRDHFVLLER 188 >gi|325953665|ref|YP_004237325.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] gi|323436283|gb|ADX66747.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] Length = 218 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD + S+ +++ + I ++L + I G+TD + A N ++S +R Sbjct: 110 DRVYFDINKSVITDNSLIQIDNIAKILKAYPTATLKIGGYTDNT---GDAAINKKISTNR 166 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPM--NSANRRIDILVEDR 341 A + L+ G+S +RIS G+ A+D + NRR+DI + + Sbjct: 167 ADEVAKALVNKGISANRIST-EGYGDQHFLCEANDTDLCRAQNRRVDIRITKK 218 >gi|209695366|ref|YP_002263295.1| peptidoglycan-associated lipoprotein precursor [Aliivibrio salmonicida LFI1238] gi|208009318|emb|CAQ79584.1| peptidoglycan-associated lipoprotein precursor [Aliivibrio salmonicida LFI1238] Length = 185 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q T F +S E +L L+ + E +++ GH D N L Sbjct: 79 QVQTVYFAFDNSTISSEYEDMLAAHAAFLSKAPEVKVTVEGHADER---GTPEYNIALGE 135 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GVS D+IS +S + + + + NRR ++ Sbjct: 136 RRANAVAKYLQALGVSADQISIVS-YGEEKPLVLGQTAEDYAKNRRAVLV 184 >gi|154252570|ref|YP_001413394.1| peptidoglycan-associated lipoprotein [Parvibaculum lavamentivorans DS-1] gi|154156520|gb|ABS63737.1| Peptidoglycan-associated lipoprotein [Parvibaculum lavamentivorans DS-1] Length = 166 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 8/109 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD S E LQ+ + ++ GH D N L R Sbjct: 56 DRVFFDTDQSSLSDEARATLQRQAAWMQLYPNLTFTVEGHADER---GTREYNLALGGRR 112 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRR-IDIL 337 A SA L+ GV R++ +S + R +++ + NRR + ++ Sbjct: 113 ANSAKDYLVSLGVDGGRLNTVS-YGKERPVCLDSNENCWAQNRRAVTVV 160 >gi|330814393|ref|YP_004358632.1| 18K peptidoglycan-associated outer membrane lipoprotein [Candidatus Pelagibacter sp. IMCC9063] gi|327487488|gb|AEA81893.1| 18K peptidoglycan-associated outer membrane lipoprotein [Candidatus Pelagibacter sp. IMCC9063] Length = 155 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 38/111 (34%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + F +S+ L K + S + I GH D N L RA Sbjct: 50 DRVFFATNSTGLTSAAKTTLTKQAGYIKSSKIYVVIEGHADER---GTREYNLALGERRA 106 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 +A LM GV++ I + + R S NRR + V+ + Sbjct: 107 NAARDYLMAKGVAKSSIK-VISYGKERPANTDSSKLAWSQNRR-SVTVKAK 155 >gi|288225947|gb|ADC44458.1| OmpA [Candidatus Erwinia dacicola] Length = 324 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD + N +LS Sbjct: 196 KSDVLFNFNKNTLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRID---SEQYNQKLS 252 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSAN---------RRIDIL 337 RA S L+ G+ +I G I D + N RR++I Sbjct: 253 EKRAQSVVDHLVSKGIPASKIYA-RGKGKSNPIIGSTCDSVKGRNALIDCLAPDRRVEIE 311 Query: 338 VED 340 V+ Sbjct: 312 VKG 314 >gi|262281137|ref|ZP_06058919.1| outer membrane protein A [Acinetobacter calcoaceticus RUH2202] gi|262257368|gb|EEY76104.1| outer membrane protein A [Acinetobacter calcoaceticus RUH2202] Length = 352 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L I GHTD + + N RLSL RA Sbjct: 233 RVFFDTNKSNIKDQYKPEIAKVAEKLTEYPNATARIEGHTDNT---GPRKLNERLSLARA 289 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 290 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 341 >gi|242281267|ref|YP_002993396.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] gi|242124161|gb|ACS81857.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] Length = 276 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 64/154 (41%), Gaps = 17/154 (11%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + L+ + + + FE+ R ++SI +F S+ E +L + VL Sbjct: 87 EPIKPLLWEFAEEDLRFESNRFVQILSIGAD---VLFTPDSTSLSIEGTRILDTVLPVLK 143 Query: 261 HSTEVISIRGHTDASPFRNIARD-----------NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + GHT +W++SL+R+ + Y L+++G+ + + Sbjct: 144 RVKHPVLVAGHTSILRDELGEDYRVEDRDLTPDISWKISLNRSLAVYNYLIRNGMDSE-M 202 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 K+ F R + + NRR+D++++ R Sbjct: 203 LKMEAFGKFRPRHPNSTPEGRKMNRRVDLVLDTR 236 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 30/89 (33%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + P W I ++D MT+++ FF+++ ++ D+ K + Sbjct: 3 RKKKPPEPEGQPLWLITFSDLMTLMLTFFVLLVSMSVVDERRKLVVLGSIIGTFGFGSKG 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + D Q+ + E I Sbjct: 63 YDVLSDTQSRKTVQVGPMELQADLEPIKP 91 >gi|171060730|ref|YP_001793079.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6] gi|170778175|gb|ACB36314.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6] Length = 200 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ +S+ P + L + L + ++ GH D A N +LS RA Sbjct: 96 FETNSARLTPSSRQQLDTVAAALKSNQLQAYGFNLEGHADPR---GQASTNRQLSQMRAE 152 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 S L+ G+ DR++ I G D NRR+ I+ Sbjct: 153 SVRDYLVATHGIPVDRLAPI-GKGDTEPLNTRDVAAPENRRVTIV 196 >gi|83950087|ref|ZP_00958820.1| peptidoglycan-associated lipoprotein [Roseovarius nubinhibens ISM] gi|83837986|gb|EAP77282.1| peptidoglycan-associated lipoprotein [Roseovarius nubinhibens ISM] Length = 186 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F L + L ++ I GH D N L R Sbjct: 76 DRVLFPVDQHTLTSTAQQTLNGQAQWLLRNTDYDALIEGHADEQ---GTREYNLALGARR 132 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A S + L+ GV R+ + + R + + + NRR ++ G Sbjct: 133 ANSVQEYLISQGVPSTRLK-VISYGKERPIEICSEESCYAQNRRSVTVISAGAG 185 >gi|303325524|ref|ZP_07355967.1| OmpA family protein [Desulfovibrio sp. 3_1_syn3] gi|302863440|gb|EFL86371.1| OmpA family protein [Desulfovibrio sp. 3_1_syn3] Length = 332 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + + +L + ++ + I G TD N LS +RA + Sbjct: 232 FAFNSYALDGKAMGILNEAASLIKANPNKRVILNGWTDWI---GTDAYNKVLSQNRANAV 288 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L K G+ R++ I G K + NRR +I Sbjct: 289 KNYLEKQGIPASRMTAI-GRGKSF-KYDNKTEEGRYMNRRTEI 329 >gi|297560820|ref|YP_003679794.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845268|gb|ADH67288.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 477 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 77/257 (29%), Gaps = 16/257 (6%) Query: 95 QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154 + ++ + + S + IGS + + + +L + G Sbjct: 51 VDPLEQAFYSPVRDESGETTIGSEVVPHWVMDADYEYQVHFPPLPEDTERITLVVNGSFG 110 Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 + + + + P + R ++ + L + Sbjct: 111 EFTGIPVIDGEPPAEPPGDSVDPSDINPGDTVAVPLREAEMTSEPEDYARDLYSIIEDSS 170 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV----ISIRG 270 +T I + +FD + PE VL ++ + + + I + G Sbjct: 171 RTRTSTTDEETIGLHAD---VLFDFDEATLTPEAEDVLAEVVQETRENADPSRPPIRVVG 227 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK-----IASD 325 HTD N LS RA + VL + G+ + + G + Sbjct: 228 HTDGR---GSEDYNQDLSERRAQAVLDVLEE-GLGTEYEYETEGRGAEEPLVEEGGADDE 283 Query: 326 PMNSANRRIDILVEDRQ 342 + NRR++I + RQ Sbjct: 284 EARATNRRVEISYKIRQ 300 >gi|146985|gb|AAA24233.1| outer membrane protein II [Escherichia vulneris] Length = 238 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 18/148 (12%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--- 263 +N + ++ +F+ + + PE L ++ L++ Sbjct: 94 QEENAPVVAPAPAPAPEVTTKTFTLKSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKD 153 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI- 322 + G+TD + N +LS RA S L+ G+ ++IS G Sbjct: 154 GSAVVLGYTDRI---GSEQYNQKLSEKRAQSVVDYLVAKGIPANKISA-RGMGESDPVTG 209 Query: 323 ---ASDPMNSA-------NRRIDILVED 340 + +A +RR+ I V+ Sbjct: 210 NTCDNVKARAALIDCLAPDRRVAIEVKG 237 >gi|260063550|ref|YP_003196630.1| OmpA family protein [Robiginitalea biformata HTCC2501] gi|88782994|gb|EAR14168.1| OmpA family protein [Robiginitalea biformata HTCC2501] Length = 652 Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 79/275 (28%), Gaps = 19/275 (6%) Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 KG P S+Q+ I + + N Q+ Sbjct: 382 KGSVQNVGTPVNSAQDDFTYVISDTTREGYFASNRPGGPGGDDIYGFVENRPLQFECIQA 441 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 +E E++ + E L + ++ + Sbjct: 442 ISGTVRNKITNELLAGATVRIIDEQNNEVSSAITDSRGNYEITLDCNQPNFVRASREGYV 501 Query: 201 STLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSSIPLPETIVVLQ 253 L +D + V F I D + FD + P+ + +Q Sbjct: 502 PAEEYLSPSDGKPRVVDFYLEPETITAGYGDDLAKLLQLSTIYFDFDKANIRPDAEIEIQ 561 Query: 254 KIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 K+ + I HTD+ N LS RA S + ++ G++ +R+ + Sbjct: 562 KVIAAMEKYPSLRIKANSHTDSR---GPDAYNLALSQRRADSTVRYMISKGIAPERL-EG 617 Query: 313 SGFAHHRLKIASDP-------MNSANRRIDILVED 340 GF RL D + NRR + ++ + Sbjct: 618 EGFGESRLINRCDDGVPCSAQEHELNRRSEFIILE 652 >gi|288941479|ref|YP_003443719.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM 180] gi|288896851|gb|ADC62687.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180] Length = 680 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 87/308 (28%), Gaps = 33/308 (10%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 +T + V+ I++ P + T +G + +++ + Sbjct: 398 ITAM-----VIGILSGIGLVGWYIQSSSLKPIASPIET--QGQDTTEKAARSAAERLVPS 450 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 T + + + ++ + + + + + + ++ Sbjct: 451 VPVTEQTPETPPFDVLISLAQEPSGPEADAVTVEESVIEEAPGTVAGDSPLQTNAASSET 510 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + ++ E P +RL+ +S + L ++I Sbjct: 511 ESVPEAAATAEPETEAPSESVPAPDRPGLERLESGLAALSIEVERLAPNHIR-------- 562 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN 279 D F S +L + +L V I HTD Sbjct: 563 --------ADLSRLIQFRDGSVALDESARTLLARFAGLLKEDERVRLHIVTHTDTQ---G 611 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----NRRID 335 +N LS RA +L G+ RI+ G K + NRRI+ Sbjct: 612 ATTNNQVLSERRAADIALILRLEGIGASRITH-EGKGMSEPKFTREEERRLGPWINRRIE 670 Query: 336 I-LVEDRQ 342 I L+E + Sbjct: 671 IDLIESDE 678 >gi|163866824|gb|ABY47582.1| outer membrane protein A [Acinetobacter baumannii] Length = 337 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 8/105 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 S L+ + V R+S GFA + + NRR+ Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRV 331 >gi|315122505|ref|YP_004062994.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495907|gb|ADR52506.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 190 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 47/143 (32%), Gaps = 8/143 (5%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L V I F S + V+ Sbjct: 47 HLDKAEDELRMQLQDVDVSIIRKYDQIT---CHIPVHIAFSSGSILHKDIVPVLNSIATT 103 Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + + I+I GHTD+ N +S R+ L++ GVS DR + GFA+ Sbjct: 104 LNKFPSTKIAITGHTDSI---GTLEYNLLISQQRSQIITDYLIEKGVSPDRFAPPQGFAY 160 Query: 318 HRLKIASDPMNSA--NRRIDILV 338 R +D N+R++I + Sbjct: 161 KRPIDTNDTQEGRKNNQRVEINI 183 >gi|224536108|ref|ZP_03676647.1| hypothetical protein BACCELL_00973 [Bacteroides cellulosilyticus DSM 14838] gi|224522279|gb|EEF91384.1| hypothetical protein BACCELL_00973 [Bacteroides cellulosilyticus DSM 14838] Length = 667 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 58/167 (34%), Gaps = 34/167 (20%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + +NI + L+E I+ ++ + E+ V L ++ E+L + Sbjct: 501 EEMATENINEDRLYELEFPLSSITRPVLIENIFYEFDKADLTSESTVALDELIELLNDNP 560 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK- 321 I + H D ++ N RLS RA S + L+K G+ +R++ G+ + K Sbjct: 561 NVTIELSAHCD---YKGNDDYNLRLSQRRAESVVRYLIKGGIDPERLTP-KGYGEQQPKT 616 Query: 322 ----------------------IASDPMNSA------NRRIDILVED 340 I + P NRR + V Sbjct: 617 VTKFTLKSAPFLKEGDVLTEEFIKNLPPEQQEICNAINRRTEFKVLR 663 >gi|332559394|ref|ZP_08413716.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N] gi|332277106|gb|EGJ22421.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N] Length = 310 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 12/181 (6%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + E L + A + ++ L + + + V D V ++ Sbjct: 133 DGAEGAEAVSLLISRSDATGFVQVIEALPRTATPPVPVAVPDEPVAAEAAPPAAGTLIPR 192 Query: 228 IIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282 + + + F S+ L + + L + GHTDA Sbjct: 193 LEETGAAVLEELVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDA---SGGLE 249 Query: 283 DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 N LS RA S + L+ + GV +++ G + + + + NRR+++++ Sbjct: 250 GNVTLSRARAASVRERLIARHGVDGAQVTA-DGVGYLAPRATNRTEEGRARNRRVEVMLL 308 Query: 340 D 340 Sbjct: 309 A 309 >gi|126740601|ref|ZP_01756288.1| OmpA domain protein [Roseobacter sp. SK209-2-6] gi|126718402|gb|EBA15117.1| OmpA domain protein [Roseobacter sp. SK209-2-6] Length = 644 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 40/115 (34%), Gaps = 7/115 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 S+ D F+ S+ + L K EVL + I+GHTD+ N Sbjct: 490 SLQDVTGKIHFEPGSATVAAGSSATLDKAAEVLELCGPIRLEIQGHTDSQ---GREGMNQ 546 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 LS RA S L + I G+ +D NRRI+ V Sbjct: 547 SLSQARAQSILNELRARRIRTSTILA-KGYGESTPIATNDSEEGREANRRIEFKV 600 >gi|126642864|ref|YP_001085848.1| outer membrane protein A [Acinetobacter baumannii ATCC 17978] Length = 346 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 221 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 277 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 278 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 329 >gi|300870393|ref|YP_003785264.1| flagellar motor protein MotB [Brachyspira pilosicoli 95/1000] gi|300688092|gb|ADK30763.1| flagellar motor protein MotB [Brachyspira pilosicoli 95/1000] Length = 266 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 66/177 (37%), Gaps = 18/177 (10%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + A+ R + + + +S L ++ V G +I++ + F Sbjct: 85 AGGANVDALPAMDRGYSMGRSVDKAVSVLESEIKNNKVRVSEDERGFVITLGADQY---F 141 Query: 238 DKSSSIP--LPETIVVLQKIGEVLAHSTEVISIRGHTDASPF------RNIARDNWRLSL 289 + +S+ KI VL+ I I GHTD+ +NW LS Sbjct: 142 ESASTNIVNTQNNTETFIKIASVLSTLPNDIRIEGHTDSGAILEGSITEQWFGNNWGLST 201 Query: 290 DRAYSAYQVL----MKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340 RA + L + ++ ++G+A R ++D + NRR+DI+V Sbjct: 202 ARAIVVLEKLFESDQTGKLDINK-YSVAGYADTRPVASNDLPDGRALNRRVDIVVVR 257 >gi|237752655|ref|ZP_04583135.1| motility protein MotB [Helicobacter winghamensis ATCC BAA-430] gi|229376144|gb|EEO26235.1| motility protein MotB [Helicobacter winghamensis ATCC BAA-430] Length = 233 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 83/203 (40%), Gaps = 11/203 (5%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + ++ L S + + ++ + P+ I + + ++ + + Sbjct: 16 ATFDTQKIAQAVGSLEGSFAVLEKGSQSQINPPAPIKATPIETQVEMENVLNIFGSLITD 75 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAH 261 + + + V E G++I I ++ +F S+ P I L+++ L Sbjct: 76 YNEVNRISNGPSVELEEAERGVIIRIPEEL---LFATGSAELTNPSGIAFLKRLSLELLR 132 Query: 262 STEVISIR--GHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + + ++ GHTD P R A DN LS+ R + ++L+K G+ ++RI G Sbjct: 133 MPKAVLVKAIGHTDNVPMRANAVFADNLELSVARGVNVAELLLKQGLEKNRIL-GGGEGE 191 Query: 318 HRLKIASD--PMNSANRRIDILV 338 +D + + NRR+D+ V Sbjct: 192 FSPIANNDIPALRAKNRRVDLYV 214 >gi|158314079|ref|YP_001506587.1| OmpA/MotB domain-containing protein [Frankia sp. EAN1pec] gi|158109484|gb|ABW11681.1| OmpA/MotB domain protein [Frankia sp. EAN1pec] Length = 407 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 6/103 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F ++ T L K+ L + + GHTD++ N LS+DRA A Sbjct: 305 FPVGDTVLGASTRSGLDKVARALLPGDLTVIVGGHTDST---GPRALNQALSIDRARVAR 361 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDIL 337 + L+ GV +RI + +GF + + +ANRR+D+ Sbjct: 362 EYLVMRGVPAERI-RAAGFGPDQPIADNASTSGRAANRRVDVT 403 >gi|294678711|ref|YP_003579326.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB 1003] gi|294477531|gb|ADE86919.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003] Length = 173 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 33/104 (31%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 +T F S E L + L I GH D N L R Sbjct: 63 DTVRFVVDQSTLTDEARATLSGQAQWLNSHGNYAAIIEGHADEQ---GTREYNLALGARR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 A S Q L+ GV R+ +S + R + S NRR Sbjct: 120 ASSVQQYLISQGVPATRLRTVS-YGKERPIATCASESCFSQNRR 162 >gi|163866750|gb|ABY47335.1| putative outer membrane protein [Aeromonas hydrophila] Length = 339 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 32/299 (10%), Positives = 79/299 (26%), Gaps = 33/299 (11%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + N F T + G R + + + +G+ Sbjct: 51 QEDAAAANAFMGYNFTENFGTELGYQYTGRGNTDGNRYESQGATLSGIARMPVGNDFSLF 110 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + ++ + + + DL+ + + E+ Sbjct: 111 AEGGAYWGHTDGLGTSDTKVSPLAGAG---VTYKVNDALDLQARYRYMWDVADLHANGER 167 Query: 183 ILAMKRKKRLQDLAK-----KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 A + L+ + ++ + +V + + + +F Sbjct: 168 YKANQSIATLEAVYHPFRTSYVAPVAAPVVEEAPAPAPQVVEKNFAL-------NSDVLF 220 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 PE + L + + + + G+TD N +LS RA + Sbjct: 221 AFGKDTLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLSEARART 277 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDILVEDRQ 342 L+ G++ ++ I G + + +RR+++ V Q Sbjct: 278 VANFLVSKGMAASKV-AIEGRGEANPVTGTKCNGVTAKAQLISCLAPDRRVEVRVSGVQ 335 >gi|269968606|ref|ZP_06182608.1| hypothetical protein VMC_40380 [Vibrio alginolyticus 40B] gi|269826817|gb|EEZ81149.1| hypothetical protein VMC_40380 [Vibrio alginolyticus 40B] Length = 288 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 7/158 (4%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +++RL L +++ LS + + F S+ P+ Sbjct: 118 QRRRLNQLEQQLDYVLSQTTCTPPDDIEALRSDLNIVSDIYALLNIDNQFAVDSAEINPK 177 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + L + +L + + GH DA+ N +L+ RA + L G++ Sbjct: 178 YMGHLAEAAYILRDHPNLSLVVTGHADAT---GTPDYNQKLAQARAEQVKRYLTVFGITS 234 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +R++ + + NRR+ I V Sbjct: 235 ERVTT-KSVGDNLPLYEGETPAVRLTNRRVSIEVISPN 271 >gi|255037115|ref|YP_003087736.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254949871|gb|ACT94571.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 484 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 44/107 (41%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD ++ PE +L+ + ++ + + + GHTD R N LS R + Sbjct: 381 FDTDKNVLKPEFQELLKNVAALMNKNGCRLQLAGHTDRR---ASDRYNIALSKRRVEAVK 437 Query: 297 QVLM-KSGV-SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 L+ ++G+ ++ + F + S NRR+++ + Sbjct: 438 NFLINEAGLQDPSKVI-VDYFGSFKPIADSATRPGLQKNRRVELKLL 483 >gi|167950569|ref|ZP_02537643.1| flagellar motor protein MotD [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 89 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 37/78 (47%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 + + + + P + W + YADF+T+L AFF+VM+ +++ ++ + + + K Sbjct: 1 MARSRRKRVEEPVHHERWIVSYADFITLLFAFFVVMYSLSSVNEGKYRVLSNTLSQAFKE 60 Query: 76 LMTASKGIFDEQNPPERS 93 + I + ++ Sbjct: 61 AGRTLEPIQLGELKRDQG 78 >gi|163866826|gb|ABY47583.1| outer membrane protein A [Acinetobacter baumannii] Length = 343 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339 >gi|37704616|gb|AAR01580.1| OprF [Pseudomonas sp. MFY63] Length = 297 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 6/88 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P + ++ + + + + ++ GHTD+ N +LS RA + Sbjct: 214 FDFDKSVVKPNSYADIKNLADFMKQYPQTTTVVEGHTDSV---GPDAYNQKLSERRANAV 270 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKI 322 QVL GV R+ + G+ R Sbjct: 271 KQVLTSQYGVESSRVQSV-GYGESRPVA 297 >gi|183598397|ref|ZP_02959890.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827] gi|188020575|gb|EDU58615.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827] Length = 357 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 44/142 (30%), Gaps = 18/142 (12%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIR 269 + + R+ +F+ + + PE L ++ L+ + + Sbjct: 210 EPAPVVEPAPVVENKRFTLRSDVLFNFNKATLKPEGQQALNELYNELSSIDPTQGRVLVV 269 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASD 325 G TD N LS RA S L+ GV I G + Sbjct: 270 GFTDRI---GSQNYNLPLSQKRAQSVVDYLVAKGVPASAI-AAEGRGKEDPVTGNKCDNV 325 Query: 326 PMNSA-------NRRIDILVED 340 +A +RR++I ++ Sbjct: 326 KGRAALIECLAPDRRVEIEIQG 347 >gi|169632496|ref|YP_001706232.1| putative Outer membrane protein precursor (OmpA-like) [Acinetobacter baumannii SDF] gi|169151288|emb|CAO99984.1| putative Outer membrane protein precursor (OmpA-like) [Acinetobacter baumannii] Length = 357 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 232 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 288 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 289 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 340 >gi|303237447|ref|ZP_07324013.1| OmpA family protein [Prevotella disiens FB035-09AN] gi|302482397|gb|EFL45426.1| OmpA family protein [Prevotella disiens FB035-09AN] Length = 226 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 56/148 (37%), Gaps = 8/148 (5%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K+++ + V + V+ + ++ + +F +SS + L Sbjct: 75 MDKVAAQTAAKVENAKVEKTKDANGLDCVKVTF---DSGILFATNSSSLSAASKKDLNNF 131 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 VL + + I+G+TDA N LS RA + L GV +I + G Sbjct: 132 AGVLKQNRDCDVAIQGYTDA---SGNDNINLPLSEKRATAVSSYLRAQGVPAGQIRTVEG 188 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ ANRR+++ + + Sbjct: 189 LGSANPI-ENKRISQANRRVEVYMYASK 215 >gi|99082304|ref|YP_614458.1| OmpA/MotB [Ruegeria sp. TM1040] gi|99038584|gb|ABF65196.1| OmpA/MotB [Ruegeria sp. TM1040] Length = 352 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 71/236 (30%), Gaps = 15/236 (6%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 +N +LS + SL G + + + LP Sbjct: 121 EVIPAPDMAVNLSNYEFLSAQEPQSGTAVSLLVSRLGGSIYVQVIERHDPAHLLRPQTLP 180 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI-------VKGVLFETTRTGILISII 229 L + + A+ +S + + + R + + Sbjct: 181 ALGPSTQPVDRDTIQADASAQGAASNTENGLEQALLVDAIKKGGSLSTGALRDVLQLQGH 240 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLS 288 FD +S+ L+ + ++ + + GHTD + N LS Sbjct: 241 VPLLDLEFDTASAQVGEGPYDSLKHLATFMSDHESAVILLVGHTDTV---GGLQGNIALS 297 Query: 289 LDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 RA S + L+ + GV RI +++G + + NRR++ ++ Sbjct: 298 ERRAASVRERLITRYGVDGARI-QVAGAGYMAPLAPNTSEEGREINRRVEAVLVRP 352 >gi|323143608|ref|ZP_08078285.1| peptidoglycan-associated lipoprotein [Succinatimonas hippei YIT 12066] gi|322416671|gb|EFY07328.1| peptidoglycan-associated lipoprotein [Succinatimonas hippei YIT 12066] Length = 181 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + NT F+ S + V+Q + L + + I I GHTD N L Sbjct: 75 ENNTIYFNYDSDQIHDNYVGVMQAHAKYLRENPDAHIIIEGHTDER---GTPEYNIALGE 131 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 RA S + + GV +++S +S + + + ++ + NRR I Sbjct: 132 RRARSVARYMQNLGVDVNQLSIVS-YGEEKPLVVGHNENAWAKNRRAVI 179 >gi|24375049|ref|NP_719092.1| OmpA family protein [Shewanella oneidensis MR-1] gi|24349795|gb|AAN56536.1|AE015790_7 OmpA family protein [Shewanella oneidensis MR-1] Length = 370 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 54/134 (40%), Gaps = 8/134 (5%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 V + + + F S++ E ++++ + + E I GH Sbjct: 235 HKVDSVGCTLYENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYMNKNPEFTVEIAGH 294 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN-- 328 N LS RA + ++L++ G+S+ R++ +G+ + +A + Sbjct: 295 ASNV---GKPEYNMVLSDKRADAVAKILVEKYGISQSRVTS-NGYGITKPLVAGNSKEAH 350 Query: 329 SANRRIDILVEDRQ 342 +ANRRI+ +V + Sbjct: 351 AANRRIEAIVTTTE 364 >gi|221066746|ref|ZP_03542851.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1] gi|220711769|gb|EED67137.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1] Length = 170 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 7/107 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + FD S P +++ + + ++ I RGHTD+ N L R Sbjct: 65 HIVYFDFDSYTVRPSDRGIVESHAQWMRNNPRQALILRGHTDSR---GGTEYNLALGQKR 121 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 + S Q L G+ R+ IS + RL +S+ + NRR++ Sbjct: 122 SESVLQSLQILGIDPSRVEAIS-YGKERLVDLGSSNDAHQLNRRVEF 167 >gi|319786286|ref|YP_004145761.1| peptidoglycan-associated lipoprotein [Pseudoxanthomonas suwonensis 11-1] gi|317464798|gb|ADV26530.1| peptidoglycan-associated lipoprotein [Pseudoxanthomonas suwonensis 11-1] Length = 170 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ T FD PE ++ + L I+++G+ D N L Sbjct: 61 RQRTVYFDFDQDALKPEFQAIVGCHAKYLRDRPSARITLQGNADER---GSRAYNQALGE 117 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 R + L +G S ++ ++ + R + NRR++I+ Sbjct: 118 RRGNAVNSALQAAGGSASQL-EVVSYGEERPVCTESTESCWAQNRRVEIV 166 >gi|107103038|ref|ZP_01366956.1| hypothetical protein PaerPA_01004107 [Pseudomonas aeruginosa PACS2] Length = 314 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F + L I ++L + I GH+D N LS RA + Sbjct: 171 FPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDN---SGNRLTNRDLSRRRALA 227 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L +GV E +I+ + + +A++ + NRR+ + + Sbjct: 228 VQEYLKSNGVPESQIN-VRFYGERYPLVANNSAANRARNRRVTVHLSR 274 >gi|163866832|gb|ABY47586.1| outer membrane protein A [Acinetobacter baumannii] Length = 334 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 8/105 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 S L+ + V R+S GFA + + NRR+ Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRV 331 >gi|296390513|ref|ZP_06879988.1| hypothetical protein PaerPAb_20266 [Pseudomonas aeruginosa PAb1] Length = 158 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + P++ L KI +LA + + + GHTD N +LS R Sbjct: 51 SKVLFGNNLDRLNPDSRNTLTKIAHALLAVDIDKVRLEGHTDNY---GDEGYNQKLSERR 107 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A S V ++G+ I ++ G + + NRR+ I+V Sbjct: 108 AESVAAVFREAGMPAANI-EVRGLGMSKPVADNKTRAGRSENRRVAIIV 155 >gi|91775931|ref|YP_545687.1| OmpA/MotB [Methylobacillus flagellatus KT] gi|91709918|gb|ABE49846.1| OmpA/MotB [Methylobacillus flagellatus KT] Length = 363 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQ-KIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSL 289 + +F E L + E + EV + I GHTD N +LS Sbjct: 244 SEVLFGFDKDNLKEEGKAKLNADVVEKMKAHPEVELVLITGHTDRI---GDETYNQKLSE 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRR--IDILVE 339 RA + Q L+ G+ E R+ + G + + NRR ++I V+ Sbjct: 301 RRANTVKQYLISQGIEESRLHAV-GKGESEPVVECAGVRGKKAIECLQPNRRVVVEIEVQ 359 Query: 340 D 340 Sbjct: 360 R 360 >gi|50085748|ref|YP_047258.1| putative outer membrane lipoprotein [Acinetobacter sp. ADP1] gi|49531724|emb|CAG69436.1| putative outer membrane lipoprotein [Acinetobacter sp. ADP1] Length = 254 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 65/232 (28%), Gaps = 9/232 (3%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + + + ++ K + S T + K+ Sbjct: 28 PIIVEGVVPNEASKQAILQKMQAVYGADQVVDKVQVRPVSAPYGWSDSVTQVISPDLKKV 87 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS-GLVADNIVKGVLFETTRTGILISIID 230 + ++ + D+ IS S + I+ + Sbjct: 88 KQGKLTVRGTQVELTGKMSNPNDIQPTISQFQSLVQPPYRFNSQLTINQAEQKIVDDALK 147 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARDNWRLSL 289 R F+ S+I +L ++ L HTD+ A N LS Sbjct: 148 NRIIE-FESGSAILTASGQQILDEMAAALKKVGGKKVKIIGHTDS---SGDASKNLVLSQ 203 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 +RA + L+ +S D +S G ++ + NRRI+ V Sbjct: 204 ERAVAVKNYLITKNISSDNLST-EGVGSNKPVADNTTAEGRRKNRRIEFEVL 254 >gi|319943001|ref|ZP_08017284.1| peptidoglycan-associated lipoprotein [Lautropia mirabilis ATCC 51599] gi|319743543|gb|EFV95947.1| peptidoglycan-associated lipoprotein [Lautropia mirabilis ATCC 51599] Length = 189 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + F+ S LPE +++ L+ + I + G+TD N L Sbjct: 83 KREVFFEFDSFAILPEYQPIIEAHANYLSAHRDKHIVLEGNTDEF---GSREYNLALGQK 139 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 RA + + L GV E+++ IS + + + + + S NRR+DI Sbjct: 140 RADAVRRALSTLGVDENQMESIS-YGEEKPRASGTDESSRSQNRRVDI 186 >gi|282891235|ref|ZP_06299738.1| hypothetical protein pah_c048o071 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498928|gb|EFB41244.1| hypothetical protein pah_c048o071 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 238 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPL-PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F +S++ E ++ L+K+ L + I GH D N L R+ + Sbjct: 134 FPYNSNLIKGEENLLALRKVANYLKKHDRVYVFIEGHCDER---GAEAYNLALGSRRSNA 190 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDR 341 ++L+K GV+ + + IS + R ++ NRR + + R Sbjct: 191 VREILIKEGVNPENLFTIS-YGKERPLFLDHNEESWGQNRRAEFKIYQR 238 >gi|255035577|ref|YP_003086198.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254948333|gb|ACT93033.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 433 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 88/284 (30%), Gaps = 11/284 (3%) Query: 59 DDTKKAIEQYFN-PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 + ++ F F I + ++ + E S KIG Sbjct: 154 PEQLDSLPNNFTLQFDLLGNKQVSNIGELMISLMKADDTDQKFDLAESDHIKSPSFKIGF 213 Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + +L + + + + +++ K + + ++ + LP Sbjct: 214 SPTSADKGQLHYSTNLIGKQYKYGVPEFRTDKNTVKVAIWRQKQRVRVYLDSTKILDLPR 273 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 S NI+ V TR ++ + F Sbjct: 274 ALDPMATLNTLA--FTAKNPDFSQEGGAFFIGNIILAVGAADTRNKLVTEGRFTTHGIQF 331 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 + +S LP + L+ + +VL + + I GHTDA N +LS+ RA + Sbjct: 332 NVNSDEILPLSYGALKDVAQVLQENPGVKVQIVGHTDAD---GSDESNVQLSMRRAEAVK 388 Query: 297 QVLMKS-GVSEDRISKISGFAHHRLKIASD--PMNSANRRIDIL 337 + + + R+ G ++D + NRR++ + Sbjct: 389 KAMEAHFAIDGTRLQT-DGKGESSPIDSNDTPTGKANNRRVEFI 431 >gi|213963879|ref|ZP_03392126.1| immunogenic 75 kDa protein PG4 [Capnocytophaga sputigena Capno] gi|213953469|gb|EEB64804.1| immunogenic 75 kDa protein PG4 [Capnocytophaga sputigena Capno] Length = 658 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + FD + + L KI ++ + +R HTD+ + N LS Sbjct: 544 KIENIYFDYDKANIRKDAAEQLAKIVAIMKEYPTMKVDVRLHTDSR---GSDKYNLALSE 600 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 RA S + ++ G+ ++RI G+ +L ++ + ANRR + ++ Sbjct: 601 RRAKSTIKWIVSHGIKKNRI-TGKGYGETQLVNGCSNGVPCTEEEHQANRRSEFII 655 >gi|260548855|ref|ZP_05823077.1| outer membrane protein omp38 [Acinetobacter sp. RUH2624] gi|260408023|gb|EEX01494.1| outer membrane protein omp38 [Acinetobacter sp. RUH2624] Length = 350 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339 >gi|148555193|ref|YP_001262775.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1] gi|148500383|gb|ABQ68637.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1] Length = 373 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 FD S E +L A + + + + GH D + N LS Sbjct: 265 PFIVFFDWDKSDITAEAASILDNAANAYATTGQARVQLAGHADK---SGSDQYNVGLSQR 321 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 RA S L GV + I+ F R + + NRR++I Sbjct: 322 RADSVKAYLAGKGVPDSAITT-EAFGESRPLVETADGVREPQNRRVEIT 369 >gi|153008551|ref|YP_001369766.1| peptidoglycan-associated lipoprotein [Ochrobactrum anthropi ATCC 49188] gi|151560439|gb|ABS13937.1| Peptidoglycan-associated lipoprotein [Ochrobactrum anthropi ATCC 49188] Length = 168 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS+ + L K + L + I++ GH D N L R Sbjct: 59 DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITVEGHADER---GTREYNLALGQRR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A + L GV +R+ IS + + R +D S NRR + V + G Sbjct: 116 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADSCWSQNRRA-VTVLNGAG 167 >gi|148839593|sp|A3M8K2|OMP38_ACIBT RecName: Full=Outer membrane protein omp38; Flags: Precursor gi|193078282|gb|ABO13246.2| outer membrane protein A [Acinetobacter baumannii ATCC 17978] Length = 356 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339 >gi|129307154|gb|ABO30515.1| outer membrane protein A [Acinetobacter baumannii] Length = 340 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339 >gi|315634557|ref|ZP_07889842.1| outer membrane protein P5 [Aggregatibacter segnis ATCC 33393] gi|315476784|gb|EFU67531.1| outer membrane protein P5 [Aggregatibacter segnis ATCC 33393] Length = 354 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 16/131 (12%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 ++ + + F + P+ VL I +A + + G+TD Sbjct: 228 VVNKTFNLNSDVTFAFGKADLKPQAQGVLDGIYGEIAQVKSANVKVAGYTDRI---GSDA 284 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------N 331 N +LS RA + L+ GVS++ IS +G+ + D + + Sbjct: 285 YNQKLSQKRAETVANYLVAKGVSQNAISA-TGYGKANPVTGNKCDAVKGRKALIACLADD 343 Query: 332 RRIDILVEDRQ 342 RR++I V + Sbjct: 344 RRVEIAVSGTK 354 >gi|254787356|ref|YP_003074785.1| thrombospondin type 3 repeat family protein [Teredinibacter turnerae T7901] gi|237685616|gb|ACR12880.1| thrombospondin type 3 repeat family protein [Teredinibacter turnerae T7901] Length = 3177 Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 9/106 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F +S++ ET L + + +A + + I GH D N LS RA + Sbjct: 3074 FAFNSAVLSAETQAQLDALAQGVAAANYDFRVKIAGHADWV---GSEAFNQGLSEKRANA 3130 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L + ++ ++ G+ + ++ + NRR++I Sbjct: 3131 VANYLSERLQLNAEKWDT-RGYGEVKPVADNNSAQGRAQNRRVEIT 3175 >gi|323700324|ref|ZP_08112236.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132] gi|323460256|gb|EGB16121.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132] Length = 174 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 13/111 (11%) Query: 234 TPMFDKSSSIPL-PETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 F +S++ ++ L ++G L + I GHTD+ N +LS Sbjct: 67 YIYFATNSAVITGEQSFRQLDELGRALTSSALRGARMEIGGHTDSV---GSDAYNLQLSR 123 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 RA + L K G + ++G+ +++ NRR+ I Sbjct: 124 KRAQAVSDYLNKKYGFTAA---AVTGYGESAPVASNETAEGRAGNRRVVIT 171 >gi|254467376|ref|ZP_05080787.1| OmpA/MotB [Rhodobacterales bacterium Y4I] gi|206688284|gb|EDZ48766.1| OmpA/MotB [Rhodobacterales bacterium Y4I] Length = 634 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 38/114 (33%), Gaps = 7/114 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289 F+ S+ ++ + +I E+L + I+GHTD+ N LS Sbjct: 493 SDGKITFEPGSATIAADSAGTMDRIAEILGRCGPVRLEIQGHTDSQ---GREAMNQNLSQ 549 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 RA S L V G+ +D NRRI+ + Sbjct: 550 ARAQSVLNELRARRVVTS-TFAAKGYGESTPIAGNDTEEGREANRRIEFKLIRP 602 >gi|37704632|gb|AAR01588.1| OprF [Pseudomonas sp. MFY78] Length = 317 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + GHT Sbjct: 211 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 270 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL + GV R+ + G+ R Sbjct: 271 DSV---GPDAYNQKLSERRASAVKQVLTGQYGVESSRVQSV-GYGESRPVA 317 >gi|332702326|ref|ZP_08422414.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332552475|gb|EGJ49519.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 243 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 76/165 (46%), Gaps = 8/165 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L + AM++++R++DL S + + + + G+ + + D+ + Sbjct: 76 ELLENPREAMRKQQRIKDLLFPDDIMPSQVDRALLEENLQILARDEGVALVLSDKL---L 132 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + + +L++I VLA T +++ GH+D + N+ +S +RA Sbjct: 133 FAMGEAKLKDSALPILERIAYVLAFMTAPVNVAGHSDM--VGGRSDGNYAISANRAMEVL 190 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA-SDPM-NSANRRIDILVE 339 Q L + G+ R+ +S F + + + P + NRR++ILV+ Sbjct: 191 QFLQEYGLDNRRL-SVSAFGPDQPLLEGNGPAVWNKNRRVEILVK 234 >gi|83941418|ref|ZP_00953880.1| OmpA domain protein [Sulfitobacter sp. EE-36] gi|83847238|gb|EAP85113.1| OmpA domain protein [Sulfitobacter sp. EE-36] Length = 632 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ + + +I E+L ++ ++G+TD+ N LS RA S Sbjct: 498 FEPGSATIDASALGTMDQIAEILQDCRDIALEVQGYTDSQ---GREEMNLALSQSRAQSV 554 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L V G+ ++D NRRI+ + Sbjct: 555 LNELRARRVITGSFVA-KGYGEESPVASNDTEEGREANRRIEFKL 598 >gi|87121335|ref|ZP_01077225.1| probable outer membrane protein [Marinomonas sp. MED121] gi|86163492|gb|EAQ64767.1| probable outer membrane protein [Marinomonas sp. MED121] Length = 298 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 77/282 (27%), Gaps = 19/282 (6%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 +AI +Y + S IF S + + Sbjct: 29 QAITRYQSELNDAQWLLSGDIFSCSLSHPIMSYGDGHFIKNAGEPMKFILNPGNEKLGPG 88 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + + + + + K + + L Sbjct: 89 NVYIISQAPNWSPGLKPETLEVLAYPGYGMTVEVGGKVAERMLT-------SLNKGLHPI 141 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + + + + +++ + + + I R+ +F ++ Sbjct: 142 LAGSAWESGRETIEVVLTNINFAPAYNEFRRCMASLLPVNYDQI----ARSAVLFPENGV 197 Query: 243 IPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + L + +A+ E I I GHTD+ RDN LS RA + L+ Sbjct: 198 LLSTRMKDRLDLVALYVANDPSVEYIYIDGHTDSL---GSRRDNRELSKQRAEAVTAYLL 254 Query: 301 KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 + GV ++I I + NRR+ I +E Sbjct: 255 EQGVEVEKIIS-RYHGERYPTIDNKTRANRERNRRVTIRLEK 295 >gi|312270721|gb|ADQ55761.1| OmpA [Haemophilus parasuis] gi|312270723|gb|ADQ55762.1| OmpA [Haemophilus parasuis] Length = 366 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 243 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 299 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 300 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 358 Query: 339 EDRQ 342 + + Sbjct: 359 QGSK 362 >gi|299773241|gb|ADJ38695.1| outer membrane protein P5 [Haemophilus parasuis] gi|299773245|gb|ADJ38697.1| outer membrane protein P5 [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|209968924|gb|ACJ02823.1| outer membrane protein P5 [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|209968918|gb|ACJ02820.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968922|gb|ACJ02822.1| outer membrane protein P5 [Haemophilus parasuis] gi|224714277|gb|ACN62133.1| outer membrane protein A [Haemophilus parasuis] gi|224714281|gb|ACN62135.1| outer membrane protein A [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|84516651|ref|ZP_01004010.1| peptidoglycan-associated lipoprotein [Loktanella vestfoldensis SKA53] gi|84509687|gb|EAQ06145.1| peptidoglycan-associated lipoprotein [Loktanella vestfoldensis SKA53] Length = 176 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F S PE +L + L + + ++ GH D N L R Sbjct: 65 DRVLFAIDQSTISPEGRTILDGQAQWLLTNADYRAVIEGHADEQ---GTREYNLALGFRR 121 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + + L+ GV R+ +++ + R +++ S NRR Sbjct: 122 ANAVREYLVSRGVPSARL-EVTSYGKERPIEVCSNEACYSQNRR 164 >gi|37704626|gb|AAR01585.1| OprF [Pseudomonas sp. MFY71] Length = 321 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHT 272 V + + ++ FD S+ P + ++ + + + ++ GHT Sbjct: 215 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYADIKNLADFMKQYPATHTTVEGHT 274 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL + GV R+ I G+ R Sbjct: 275 DSV---GPDAYNQKLSERRANAVKQVLTQQYGVETARVQSI-GYGESRPVA 321 >gi|50956547|gb|AAT90794.1| conserved hypothetical protein [uncultured proteobacterium QS1] Length = 511 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 13/151 (8%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETI--VV 251 I TL + + +G L +LI D F + E Sbjct: 341 KINIMETLPQPLPKILSEGWLEVRADPRGWLLIFTSD----GAFATGQARLSEEFKKKRN 396 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSED--R 308 ++++GE LA + + GHTD P+RN + N +LS RA + + +S S R Sbjct: 397 IERLGEALAPWPGDLEVIGHTDNKPYRNSPSNSNLKLSEGRAQTVADKMRESMQSSKYQR 456 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDIL 337 G +D S NRR+DIL Sbjct: 457 SVTSVGKGDTEPLDTNDTEQGRSRNRRVDIL 487 >gi|312270773|gb|ADQ55787.1| OmpA [Haemophilus parasuis] gi|312270775|gb|ADQ55788.1| OmpA [Haemophilus parasuis] Length = 371 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 248 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 304 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 305 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 363 Query: 339 EDRQ 342 + + Sbjct: 364 QGSK 367 >gi|312270751|gb|ADQ55776.1| OmpA [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|312270745|gb|ADQ55773.1| OmpA [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|312270741|gb|ADQ55771.1| OmpA [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|312270727|gb|ADQ55764.1| OmpA [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|312270725|gb|ADQ55763.1| OmpA [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|299773291|gb|ADJ38720.1| outer membrane protein P5 [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|299773285|gb|ADJ38717.1| outer membrane protein P5 [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKAIITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|299773283|gb|ADJ38716.1| outer membrane protein P5 [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|299773281|gb|ADJ38715.1| outer membrane protein P5 [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKAIITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|299773277|gb|ADJ38713.1| outer membrane protein P5 [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|299773263|gb|ADJ38706.1| outer membrane protein P5 [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|299773261|gb|ADJ38705.1| outer membrane protein P5 [Haemophilus parasuis] gi|299773267|gb|ADJ38708.1| outer membrane protein P5 [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|299773257|gb|ADJ38703.1| outer membrane protein P5 [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|299773255|gb|ADJ38702.1| outer membrane protein P5 [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKAIITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|299773251|gb|ADJ38700.1| outer membrane protein P5 [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|209968962|gb|ACJ02842.1| outer membrane protein P5 [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|209968954|gb|ACJ02838.1| outer membrane protein P5 [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|224714311|gb|ACN62150.1| outer membrane protein A [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|224714275|gb|ACN62132.1| outer membrane protein A [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|209968936|gb|ACJ02829.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968942|gb|ACJ02832.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968946|gb|ACJ02834.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968956|gb|ACJ02839.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968958|gb|ACJ02840.1| outer membrane protein P5 [Haemophilus parasuis] gi|224714295|gb|ACN62142.1| outer membrane protein A [Haemophilus parasuis] gi|312270743|gb|ADQ55772.1| OmpA [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|209968926|gb|ACJ02824.1| outer membrane protein P5 [Haemophilus parasuis] gi|224714285|gb|ACN62137.1| outer membrane protein A [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|209968902|gb|ACJ02812.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968930|gb|ACJ02826.1| outer membrane protein P5 [Haemophilus parasuis] gi|224714289|gb|ACN62139.1| outer membrane protein A [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|209968934|gb|ACJ02828.1| outer membrane protein P5 [Haemophilus parasuis] gi|222831779|gb|ACJ23249.2| OmpA [Haemophilus parasuis] gi|224714293|gb|ACN62141.1| outer membrane protein A [Haemophilus parasuis] gi|224714317|gb|ACN62153.1| outer membrane protein A [Haemophilus parasuis] gi|224714319|gb|ACN62154.1| outer membrane protein A [Haemophilus parasuis] gi|224714321|gb|ACN62155.1| outer membrane protein A [Haemophilus parasuis] gi|224714335|gb|ACN62162.1| outer membrane protein A [Haemophilus parasuis] gi|299773259|gb|ADJ38704.1| outer membrane protein P5 [Haemophilus parasuis] gi|299773265|gb|ADJ38707.1| outer membrane protein P5 [Haemophilus parasuis] gi|299773271|gb|ADJ38710.1| outer membrane protein P5 [Haemophilus parasuis] gi|299773273|gb|ADJ38711.1| outer membrane protein P5 [Haemophilus parasuis] gi|299773275|gb|ADJ38712.1| outer membrane protein P5 [Haemophilus parasuis] gi|299773279|gb|ADJ38714.1| outer membrane protein P5 [Haemophilus parasuis] gi|299773287|gb|ADJ38718.1| outer membrane protein P5 [Haemophilus parasuis] gi|312270747|gb|ADQ55774.1| OmpA [Haemophilus parasuis] gi|312270749|gb|ADQ55775.1| OmpA [Haemophilus parasuis] gi|312270753|gb|ADQ55777.1| OmpA [Haemophilus parasuis] gi|312270755|gb|ADQ55778.1| OmpA [Haemophilus parasuis] gi|312270757|gb|ADQ55779.1| OmpA [Haemophilus parasuis] gi|312270759|gb|ADQ55780.1| OmpA [Haemophilus parasuis] gi|312270761|gb|ADQ55781.1| OmpA [Haemophilus parasuis] gi|312270763|gb|ADQ55782.1| OmpA [Haemophilus parasuis] gi|312270765|gb|ADQ55783.1| OmpA [Haemophilus parasuis] gi|312270767|gb|ADQ55784.1| OmpA [Haemophilus parasuis] gi|312270769|gb|ADQ55785.1| OmpA [Haemophilus parasuis] gi|312270771|gb|ADQ55786.1| OmpA [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|167856409|ref|ZP_02479133.1| outer membrane protein P5 precursor [Haemophilus parasuis 29755] gi|167852469|gb|EDS23759.1| outer membrane protein P5 precursor [Haemophilus parasuis 29755] gi|209968896|gb|ACJ02809.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968900|gb|ACJ02811.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968904|gb|ACJ02813.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968916|gb|ACJ02819.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968932|gb|ACJ02827.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968960|gb|ACJ02841.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968964|gb|ACJ02843.1| outer membrane protein P5 [Haemophilus parasuis] gi|222831781|gb|ACJ23250.2| OmpA [Haemophilus parasuis] gi|224714297|gb|ACN62143.1| outer membrane protein A [Haemophilus parasuis] gi|224714299|gb|ACN62144.1| outer membrane protein A [Haemophilus parasuis] gi|224714301|gb|ACN62145.1| outer membrane protein A [Haemophilus parasuis] gi|224714309|gb|ACN62149.1| outer membrane protein A [Haemophilus parasuis] gi|224714313|gb|ACN62151.1| outer membrane protein A [Haemophilus parasuis] gi|224714315|gb|ACN62152.1| outer membrane protein A [Haemophilus parasuis] gi|224714323|gb|ACN62156.1| outer membrane protein A [Haemophilus parasuis] gi|224714325|gb|ACN62157.1| outer membrane protein A [Haemophilus parasuis] gi|224714327|gb|ACN62158.1| outer membrane protein A [Haemophilus parasuis] gi|224714329|gb|ACN62159.1| outer membrane protein A [Haemophilus parasuis] gi|224714331|gb|ACN62160.1| outer membrane protein A [Haemophilus parasuis] gi|224714333|gb|ACN62161.1| outer membrane protein A [Haemophilus parasuis] gi|299773239|gb|ADJ38694.1| outer membrane protein P5 [Haemophilus parasuis] gi|299773269|gb|ADJ38709.1| outer membrane protein P5 [Haemophilus parasuis] gi|312270735|gb|ADQ55768.1| OmpA [Haemophilus parasuis] gi|312270737|gb|ADQ55769.1| OmpA [Haemophilus parasuis] gi|312270739|gb|ADQ55770.1| OmpA [Haemophilus parasuis] Length = 367 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|296130397|ref|YP_003637647.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109] gi|296022212|gb|ADG75448.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109] Length = 355 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 10/184 (5%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + +E + P + A+ + L + + + + ++ V Sbjct: 172 SAGAVPVEDGALEPVADEPAPRPGQGWPALPDPELLATADPEERTFVLTRRSSDLAGDVQ 231 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDAS 275 E + + I + + +F S+ PE L ++ +A T + + G+TD+ Sbjct: 232 VEESPEQVGIVL---DASVLFAFDSAELAPEAQSRLAEVAADIAARGTGEVVVTGYTDSD 288 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333 N LS RA S L + S + G ++D NRR Sbjct: 289 ---GDRSYNQTLSEQRAQSVVAALQPAAGGAVTFSAV-GEGESDPVASNDTDEGKQANRR 344 Query: 334 IDIL 337 + I+ Sbjct: 345 VTIV 348 >gi|238024905|ref|YP_002909137.1| OmpA/MotB [Burkholderia glumae BGR1] gi|237879570|gb|ACR31902.1| OmpA/MotB [Burkholderia glumae BGR1] Length = 225 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 6/158 (3%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 E + + + + L+ L + + G+ + Sbjct: 52 ARSRELELRSVEKQAASQTTQGTRAGAESTAARQRMLALLEPLRAKHEISIASLPQGVEV 111 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI-ARDN 284 +I + +F+ + LPE++ VL ++ VL I + GHTD+ P N Sbjct: 112 TINAK---ILFNSGEAHLLPESMDVLDQVAAVLRDPLTANIIVEGHTDSVPISTSKYESN 168 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 W LS RA + + LM GV R++ + G A + + Sbjct: 169 WELSSARAGAVVRFLMDKGVGAHRMAAV-GRADNVPLV 205 Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 22/60 (36%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83 D+T G W I YAD +T LM FL ++++ + + G Sbjct: 19 DETDEQSGRWLISYADLITTLMVLFLALYVLQLARSRELELRSVEKQAASQTTQGTRAGA 78 >gi|219872299|ref|YP_002476674.1| outer membrane protein P5 , heat-modifiable outer membrane protein [Haemophilus parasuis SH0165] gi|219692503|gb|ACL33726.1| outer membrane protein P5 precursor, heat-modifiable outer membrane protein [Haemophilus parasuis SH0165] gi|253807583|gb|ACT36164.1| outer membrane protein P5 [Haemophilus parasuis] gi|312270777|gb|ADQ55789.1| OmpA [Haemophilus parasuis] gi|312270779|gb|ADQ55790.1| OmpA [Haemophilus parasuis] Length = 371 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 248 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 304 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 305 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 363 Query: 339 EDRQ 342 + + Sbjct: 364 QGSK 367 >gi|212709831|ref|ZP_03317959.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM 30120] gi|212687642|gb|EEB47170.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM 30120] Length = 357 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288 R+ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 229 RSDVLFNFNKATLKPEGQQALNELYNELSNIDPTQGRVLVVGFTDRI---GSQNYNLPLS 285 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ GV I G + + +RR++I Sbjct: 286 QKRAQSVVDYLVAKGVPASAI-AAEGRGKEDPVTGNKCDAVKGRAALIECLAPDRRVEIE 344 Query: 338 VED 340 ++ Sbjct: 345 IQG 347 >gi|332290107|ref|YP_004420959.1| peptidoglycan-associated outer membrane lipoprotein [Gallibacterium anatis UMN179] gi|330433003|gb|AEC18062.1| peptidoglycan-associated outer membrane lipoprotein [Gallibacterium anatis UMN179] Length = 150 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 6/109 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 + + NT F PE +L + L ++ + + GHTD N Sbjct: 41 ELQQRYNTVYFGFDKYDIQPEYAQLLDAHAQYLTDTSSKVQVEGHTDPR---GTPEYNIA 97 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 L RA + L GV ++S IS + + + + +RR Sbjct: 98 LGQRRADAVKSYLEGKGVQGGQLSTIS-YGEEKPAVLGHTEADYAKDRR 145 >gi|325123365|gb|ADY82888.1| putative outer membrane protein precursor (OmpA-like) [Acinetobacter calcoaceticus PHEA-2] Length = 347 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L I GHTD + + N RLSL RA Sbjct: 222 RVFFDTNKSNIKDQYKPEIAKVAEKLTEYPNATARIEGHTDNT---GPRKLNERLSLARA 278 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 279 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 330 >gi|110636839|ref|YP_677046.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110279520|gb|ABG57706.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 1313 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 7/111 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292 F + + L + L ++ +L + + + G+TD A+ N LS R Sbjct: 1207 HVYFARGGTTLLESSYESLDQLYTLLTDNPTMRIELLGYTDNQ---GDAKLNVLLSEQRV 1263 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 + L+ G++E RI G+ ++ NRR++ + + Sbjct: 1264 AAIKDYLVGKGIAETRIG-GKGYGGANPIASNATEETRQLNRRVEFKIVSK 1313 >gi|260557183|ref|ZP_05829399.1| outer membrane protein omp38 [Acinetobacter baumannii ATCC 19606] gi|75438841|sp|Q6RYW5|OMP38_ACIBA RecName: Full=Outer membrane protein omp38; AltName: Full=Outer membrane protein ompA; AltName: Full=Outer membrane protein ompAb; Flags: Precursor gi|40287452|gb|AAR83911.1| outer membrane protein A [Acinetobacter baumannii] gi|260409289|gb|EEX02591.1| outer membrane protein omp38 [Acinetobacter baumannii ATCC 19606] Length = 356 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339 >gi|300771828|ref|ZP_07081699.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761214|gb|EFK58039.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861] Length = 650 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 48/116 (41%), Gaps = 12/116 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +D + +L ++ + + + + HTD+ A+ N +LS R Sbjct: 538 ENIYYDLDKYNIRDDAKPILNQLARTMRDNPGLRVELSSHTDSR---ATAKYNMKLSQSR 594 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 A SA ++ G++ +R+ G+ +L ++ + ANRR +I + D Sbjct: 595 AQSAVDYIVSRGIARNRLIA-KGYGESQLVNNCKDGVSCTEAQHQANRRTEIKILD 649 >gi|268590120|ref|ZP_06124341.1| outer membrane protein P5 [Providencia rettgeri DSM 1131] gi|291314389|gb|EFE54842.1| outer membrane protein P5 [Providencia rettgeri DSM 1131] Length = 363 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288 R+ +F+ + + PE L ++ L+ + + G TD N LS Sbjct: 235 RSDVLFNFNKASLKPEGQQALNELYNELSSIDPTQGRVLVVGFTDRI---GSQNYNLPLS 291 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ GV I G + +A +RR++I Sbjct: 292 QKRAQSVVDYLVSKGVPASAI-AAEGRGKEDPVTGNKCDNVKGRAALIECLAPDRRVEIE 350 Query: 338 VED 340 ++ Sbjct: 351 IQG 353 >gi|15596316|ref|NP_249810.1| YfiB [Pseudomonas aeruginosa PAO1] gi|218892915|ref|YP_002441784.1| putative outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|254234254|ref|ZP_04927577.1| hypothetical protein PACG_00091 [Pseudomonas aeruginosa C3719] gi|254239490|ref|ZP_04932812.1| hypothetical protein PA2G_00103 [Pseudomonas aeruginosa 2192] gi|9947038|gb|AAG04508.1|AE004542_4 YfiB [Pseudomonas aeruginosa PAO1] gi|126166185|gb|EAZ51696.1| hypothetical protein PACG_00091 [Pseudomonas aeruginosa C3719] gi|126192868|gb|EAZ56931.1| hypothetical protein PA2G_00103 [Pseudomonas aeruginosa 2192] gi|218773143|emb|CAW28955.1| probable outer membrane protein precursor [Pseudomonas aeruginosa LESB58] Length = 168 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + P++ L KI L + + + GHTD N +LS R Sbjct: 61 SKVLFGNNLDRLNPDSRNTLTKIARALLAVDIDKVRLEGHTDNY---GDEGYNQKLSERR 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A S V ++G+ I ++ G + + NRR+ I+V Sbjct: 118 AESVAAVFREAGMPAANI-EVRGLGMSKPVADNKTRAGRSENRRVAIIV 165 >gi|116619652|ref|YP_821808.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116222814|gb|ABJ81523.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 263 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 39/118 (33%), Gaps = 11/118 (9%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-----SIRGHTDASPFR 278 I I FD + + L + L I GH D Sbjct: 144 INDRIASDVQDAFFDYDKTDIRSDARDALTRNATALKAILNDFPGAAIVIEGHCDER--- 200 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRI 334 A N L RA SA + L+ G+ DR+ IS + R + ++ NRR+ Sbjct: 201 GSAEYNLGLGDRRASSAKEFLVGLGIPADRLKTIS-YGKERPQCTEQNETCWQKNRRV 257 >gi|311694925|gb|ADP97798.1| peptidoglycan-associated lipoprotein [marine bacterium HP15] Length = 190 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD ++ E VL LA++ I GH D N L RA + Sbjct: 89 FDFDTAEIKQEARDVLVAHARFLANNPGQNVRIEGHADER---GTKEYNLALGERRANAV 145 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 + L+ +G S ++ +S + + + +S+ + NRR++++ Sbjct: 146 QRFLIVNGASRGQLETVS-YGEEKPAVMGSSESAWAQNRRVELV 188 >gi|299768851|ref|YP_003730877.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter sp. DR1] gi|298698939|gb|ADI89504.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter sp. DR1] Length = 347 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L I GHTD + + N RLSL RA Sbjct: 222 RVFFDTNKSNIKDQYKPEIAKVAEKLTEYPNATARIEGHTDNT---GPRKLNERLSLARA 278 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 279 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 330 >gi|269960160|ref|ZP_06174536.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835131|gb|EEZ89214.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 345 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F + + ++ I + GHTD N +S RA Sbjct: 212 FQFGQKTLSRSQQSTIAALYSYISVDDRVTKILVDGHTDNV---GSQLANLTVSRQRAEQ 268 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 L++ GV + ++ +++ + NRR+ + + Sbjct: 269 VADALVQQGVDRS-LIEVRAHGSRYPIASNNTQAGQAKNRRVTLRLVRDN 317 >gi|27365951|ref|NP_761479.1| outer membrane protein [Vibrio vulnificus CMCP6] gi|27362100|gb|AAO11006.1| Outer membrane protein [Vibrio vulnificus CMCP6] Length = 280 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 9/158 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLP 246 ++KRL L +++ LS + + I+ + D N F +S+ P Sbjct: 115 QRKRLHQLEQQLDYVLS-HTRCVPPRDEDAFRFQLDIVNELYDILNIDNQFAVNSAEINP 173 Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + + L K +L T +++ GH DA+ N +L++DRA + L G+ Sbjct: 174 KYMGHLAKAANILREHTALTLTVTGHADAT---GNEAYNEKLAMDRAEQVKRYLAIFGLD 230 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 +RI+ S + NRR+ I ++ Sbjct: 231 PNRITTYS-LGEKLPLFDGESAAVRLTNRRVSIEIQSP 267 >gi|299773249|gb|ADJ38699.1| outer membrane protein P5 [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P + L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|226069484|dbj|BAH36952.1| OmpA-like outer membrane protein [Pasteurella pneumotropica] Length = 347 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 60/197 (30%), Gaps = 19/197 (9%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 + E + + + +D I S +GL + Sbjct: 158 AAGVEYALPSLPELALRVEYQWLASVGKDNKIAEDKDYTPWIGSVTAGLSYRFGQGAPVV 217 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 ++ + + F + P+ L I +A + +++ G+TD Sbjct: 218 A---PEVVSKTFNLNSDVTFAFGKANLKPQAQATLDGIYGEIAQVSNAKVAVAGYTDRI- 273 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---- 330 N +LS RA S L+ GV+ I+ +G+ D + Sbjct: 274 --GKDAANLKLSQRRADSVANYLVAKGVAAQDITA-TGYGEANPVTGATCDAVKGRKALI 330 Query: 331 -----NRRIDILVEDRQ 342 +RR++I V + Sbjct: 331 ACLAPDRRVEIAVNGTK 347 >gi|224714291|gb|ACN62140.1| outer membrane protein A [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P + L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|209968928|gb|ACJ02825.1| outer membrane protein P5 [Haemophilus parasuis] gi|224714287|gb|ACN62138.1| outer membrane protein A [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P + L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|209968908|gb|ACJ02815.1| outer membrane protein P5 [Haemophilus parasuis] gi|224714283|gb|ACN62136.1| outer membrane protein A [Haemophilus parasuis] Length = 369 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 246 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 302 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 303 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 361 Query: 339 EDRQ 342 + + Sbjct: 362 QGSK 365 >gi|221640398|ref|YP_002526660.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131] gi|221161179|gb|ACM02159.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131] Length = 310 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 12/181 (6%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 E L + A + ++ L + + V D V ++ Sbjct: 133 EGAEGAEAVSLLVSRSDATGFVQVIEALPRTAAPPAPVAVPDEPVAAEAAPPAAGTLIPR 192 Query: 228 IIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282 + + + F S+ L + + L + GHTDA Sbjct: 193 LEETGAAVLEELVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDA---SGGLE 249 Query: 283 DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 N LS RA S + L+ + GV +++ G + + + + NRR+++++ Sbjct: 250 GNVTLSRARAVSVRERLIARHGVDGAQVTA-DGVGYLAPRATNRTEEGRARNRRVEVMLL 308 Query: 340 D 340 Sbjct: 309 A 309 >gi|91223761|ref|ZP_01259025.1| hypothetical protein V12G01_18492 [Vibrio alginolyticus 12G01] gi|91191253|gb|EAS77518.1| hypothetical protein V12G01_18492 [Vibrio alginolyticus 12G01] Length = 288 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 7/158 (4%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +++RL L +++ LS + + F S+ P+ Sbjct: 118 QRRRLNQLEQQLDYVLSQTTCTPPDDIEALRSDLNIVSDIYALLNIDNQFAVDSAEINPK 177 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + L + +L + + GH DA+ N +L+ RA + L G++ Sbjct: 178 YMGHLAEAAYILRDHPNLSLVVTGHADAT---GTPDYNQKLAQARAEQVKRYLTVFGITS 234 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +R++ + + NRR+ I V Sbjct: 235 ERVTT-KSVGDNLPLYEGETSAVRLTNRRVSIEVISPN 271 >gi|313204438|ref|YP_004043095.1| ompa/motb domain protein [Paludibacter propionicigenes WB4] gi|312443754|gb|ADQ80110.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4] Length = 743 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289 Q +T +D P +L I +L + I +TD N LS Sbjct: 584 QMDTIYYDFDKWDIQPVAYSMLDSIVSLLKSYTMMHVEIASYTDKR---GTVEYNLWLSQ 640 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-------NSANRRIDILVED 340 RA + +++ GV RI G+ +RL + + NRR +I V Sbjct: 641 QRANAVVNYIVRQGVDAGRIKA-RGYGKNRLIVGDPSDISDREKIDQINRRSEIKVTG 697 >gi|332702327|ref|ZP_08422415.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332552476|gb|EGJ49520.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 282 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 18/155 (11%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L L+ ++ + F + LI I+ + +F+ + ++ ++ VL Sbjct: 87 ELLKPLLYEDARDDIRFAENK---LIQIMSISSDILFEPGQTKLSERGRDLVGRMAPVLR 143 Query: 261 HSTEVISIRGHT------------DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + + GHT D P WR+SL RA + Y+ L+ GV +R Sbjct: 144 ELPQPFLLAGHTSTLRDELKTEYLDYKPKDGEPNPGWRISLGRAMAMYRELLVHGVPVER 203 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + ++ FA +R + ++ NRR+DI+++ R Sbjct: 204 M-RVEAFADYRPRFGNETAAERRMNRRVDIVLDKR 237 Score = 36.1 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 29/89 (32%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + +W + ++D MT+L+ FF+++ + D+ K + Sbjct: 3 RRKKSKEEPGIPAWMLTFSDLMTLLLTFFVLLVSMAVIDEQRKLVVLGSIVGTFGASPET 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + R D+ E + Sbjct: 63 ENYLARHDERKTREIGPMNDIKDLELLKP 91 >gi|260220763|emb|CBA28654.1| hypothetical protein Csp_A08220 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 182 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ +S P++ L I E A + I + GHTD + + N LSL RA + Sbjct: 81 FEPGTSTLTPDSQNQLPGILEQATARAGGDIQVVGHTDRT---GSPQANDTLSLQRAQAV 137 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 +L++ G + + G + ++ NRR +I++ Sbjct: 138 RNLLIQRGFEPA-LVEAIGRGEREPVVPTEANVNEPRNRRAEIIIR 182 >gi|239832781|ref|ZP_04681110.1| peptidoglycan-associated lipoprotein [Ochrobactrum intermedium LMG 3301] gi|239825048|gb|EEQ96616.1| peptidoglycan-associated lipoprotein [Ochrobactrum intermedium LMG 3301] Length = 183 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS+ + L K + L + I+I GH D N L R Sbjct: 74 DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 130 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A + L GV +R+ IS + + R +D S NRR + V + G Sbjct: 131 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADSCWSQNRRA-VTVLNGAG 182 >gi|172064675|ref|YP_001812325.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6] gi|171998160|gb|ACB69076.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 552 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 37/111 (33%), Gaps = 7/111 (6%) Query: 232 RNTPMFDKSSSIPLPET-IVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + +F + PE L +++ + + I GH D+ R N LS Sbjct: 437 DSLSLFASGKATFSPEAAHRELAHALQLIQANPDQRVLIEGHADSE---GSPRANILLSE 493 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA + L G I G R + NRR+D+ + Sbjct: 494 ARARAIRDWLAAKGGLSVARFAIQGLGDVRPIADNSSEAGRALNRRVDVSL 544 >gi|170025766|ref|YP_001722271.1| hypothetical protein YPK_3551 [Yersinia pseudotuberculosis YPIII] gi|169752300|gb|ACA69818.1| type IV / VI secretion system protein, DotU family [Yersinia pseudotuberculosis YPIII] Length = 536 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250 + I TL +++ + +G L +LI D F + E I Sbjct: 356 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 411 Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306 ++++G LA I + GHTD PFR+ +N +LS RA L + ++E Sbjct: 412 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 471 Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R G + NRR+DIL Sbjct: 472 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 506 >gi|126463345|ref|YP_001044459.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126105009|gb|ABN77687.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 310 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 12/181 (6%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 E L + A + ++ L + + V D V ++ Sbjct: 133 EGAEGAEAVSLLISRSDATGFVQVIEALPRTAAPPAPVAVPDEPVAAEAPAPAAGTLIPR 192 Query: 228 IIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282 + + + F S+ L + + L + GHTDA Sbjct: 193 LEETGAAVLEELVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDA---SGGLE 249 Query: 283 DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 N LS RA S + L+ + GV +++ G + + + + NRR+++++ Sbjct: 250 GNVTLSRARAVSVRERLIARHGVDGAQVTA-DGVGYLAPRATNRTEEGRARNRRVEVMLL 308 Query: 340 D 340 Sbjct: 309 A 309 >gi|73541910|ref|YP_296430.1| OmpA/MotB [Ralstonia eutropha JMP134] gi|72119323|gb|AAZ61586.1| OmpA/MotB [Ralstonia eutropha JMP134] Length = 186 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 7/108 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F P+ I ++++G VL + + + GHTD + N RLSL RA Sbjct: 81 VLFGFDEDAIPPDRIADIRRLGGVLLGVGIDHVRVDGHTDHT---GSTEYNLRLSLRRAE 137 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 + +VL+ +G I ++ G R + + NRR I+V Sbjct: 138 AVARVLVTAGFEPANI-ELRGMGKGRPVADNRTAAGRAENRRASIVVT 184 >gi|254785076|ref|YP_003072504.1| outer membrane protein and related peptidoglycan-associated [Teredinibacter turnerae T7901] gi|237687207|gb|ACR14471.1| putative outer membrane protein and related peptidoglycan-associated [Teredinibacter turnerae T7901] Length = 472 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 73/235 (31%), Gaps = 13/235 (5%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 ++K+ + + + + + + + + +++ L Sbjct: 239 EALKRKELTQEQLLLQQELPVATIAGELDLVAEFDQGSEVPVAAIINRIQQLTADSHELD 298 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV--LFETTRTGILISIIDQRNT 234 L + L+ S L + +++S D Sbjct: 299 ELKARYAQLDQEFAALETKVGIQSERLKQEEEARERLRRVSDYFRRDEAMVLSQGDNVLI 358 Query: 235 PM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 M FD S+ +LQK+ + + + GHTD+ + N LS Sbjct: 359 RMVGLNFDPGSAQVNASNYALLQKVEQAVRMYPGYTVVVEGHTDSF---GSTQANQTLSE 415 Query: 290 DRAYSAYQVLMKSGVS-EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 DRA + Q L+ + + G+ + ++ NRRID+L++ Sbjct: 416 DRANAVRQYLLVNMNDLAAGAIEAYGYGESQPIANNETREGRKRNRRIDVLLKAP 470 >gi|194290119|ref|YP_002006026.1| outer membrane protein, ompa family [Cupriavidus taiwanensis LMG 19424] gi|193223954|emb|CAQ69963.1| putative outer membrane protein, ompA family [Cupriavidus taiwanensis LMG 19424] Length = 177 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + + + + +IG L+ E + + GHTD A N LS+ R Sbjct: 70 DKVLFGFNEDLIEGDRAANVLRIGRALSGVGIERLRVDGHTDD---AGSAEYNQSLSVRR 126 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A + ++L +G + D I ++ G R + + NRR+ I+V Sbjct: 127 AEAVARLLADAGFTRDNI-EVRGLGKSRPVADNRTAAGRAENRRVAIIV 174 >gi|119944499|ref|YP_942179.1| OmpA domain-containing protein [Psychromonas ingrahamii 37] gi|119863103|gb|ABM02580.1| OmpA domain protein [Psychromonas ingrahamii 37] Length = 195 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 7/175 (4%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 S + ++ + A K ++ A + ++ + + D + L E Sbjct: 24 SKSYNDSAAMEANKAAMEQAAMDKAAMELAAMERAAEENKIETDGLQVVELTEEELMAQQ 83 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDN 284 S + T FD +S+ PE +L + L + ++ ++I GHTD N Sbjct: 84 YSDAILQKTIQFDFDTSMIKPEFTSILDAHAKFLVNNPSKKVTIEGHTDEKGTPG---YN 140 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 LS RA S L GV D+I + + + + NRR +++ Sbjct: 141 IALSERRAMSVSVYLENMGVLPDQI-SVVSYGEEKPLNFGHSEASWADNRRAELV 194 >gi|255280230|ref|ZP_05344785.1| OmpA family protein [Bryantella formatexigens DSM 14469] gi|255269321|gb|EET62526.1| OmpA family protein [Bryantella formatexigens DSM 14469] Length = 319 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 110/339 (32%), Gaps = 62/339 (18%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + + + W+ Y+D M ++ F+++ ++ +A Y Sbjct: 2 RRRREKDNSGFNVWR-SYSDMMAGVLLLFVLIMCVSL-----FQAQVNYEASIK------ 49 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + L + + TK + + +Q+ Q + + S + Sbjct: 50 ---------------ERDEKLYLQDEYTKKIMSQEDQMADQQNQLASQDELLA--SQDEL 92 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 K L +E+ D + + + L + + + ++ + + Sbjct: 93 LAAQKAQLDALAEQLATQQSQLDEQSATLASQQSALDEKTTQLADQQAQIDKIIGVKADV 152 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----- 254 L A+N V + T +++ ++ +FD + E VL Sbjct: 153 IEALKQEFANN-NISVEIDETTGSLVM-----DSSVLFDYDETELTEEGQEVLGNVLPIY 206 Query: 255 ----IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI- 309 + E I I G+TD+ N LS R+ + + L+ G+S+ + Sbjct: 207 CSVLMQEEYFPYLAEIIIDGYTDS---SGGYEYNLELSQRRSLAVAEYLL--GISQSFLD 261 Query: 310 ----------SKISGFAHHRLK-IASDPMNS-ANRRIDI 336 ++G + L + ++ A+RR+++ Sbjct: 262 ADDQDALKEKLTVNGHSSSNLVLNENGEEDADASRRVEV 300 >gi|166712982|ref|ZP_02244189.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzicola BLS256] Length = 172 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD PE ++ + L I+++G+ D N L Sbjct: 63 RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 119 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337 R + L +G S +++ +S + R +++ S NRR++I+ Sbjct: 120 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 168 >gi|145600375|ref|YP_001164451.1| OmpA-family membrane protein [Yersinia pestis Pestoides F] gi|145212071|gb|ABP41478.1| OmpA-family membrane protein [Yersinia pestis Pestoides F] Length = 529 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250 + I TL +++ + +G L +LI D F + E I Sbjct: 349 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 404 Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306 ++++G LA I + GHTD PFR+ +N +LS RA L + ++E Sbjct: 405 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 464 Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R G + NRR+DIL Sbjct: 465 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 499 >gi|108809572|ref|YP_653488.1| hypothetical protein YPA_3581 [Yersinia pestis Antiqua] gi|108810554|ref|YP_646321.1| OmpA-family membrane protein [Yersinia pestis Nepal516] gi|150260448|ref|ZP_01917176.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125] gi|165928091|ref|ZP_02223923.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937799|ref|ZP_02226360.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008916|ref|ZP_02229814.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166211978|ref|ZP_02238013.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401306|ref|ZP_02306806.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421902|ref|ZP_02313655.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426473|ref|ZP_02318226.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467268|ref|ZP_02331972.1| hypothetical protein YpesF_05092 [Yersinia pestis FV-1] gi|218927713|ref|YP_002345588.1| hypothetical protein YPO0514 [Yersinia pestis CO92] gi|229836901|ref|ZP_04457066.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A] gi|229840403|ref|ZP_04460562.1| putative OmpA-family membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842483|ref|ZP_04462638.1| putative OmpA-family membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229900741|ref|ZP_04515865.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516] gi|270487887|ref|ZP_06204961.1| OmpA family protein [Yersinia pestis KIM D27] gi|294502609|ref|YP_003566671.1| hypothetical protein YPZ3_0499 [Yersinia pestis Z176003] gi|108774202|gb|ABG16721.1| OmpA-family membrane protein [Yersinia pestis Nepal516] gi|108781485|gb|ABG15543.1| putative OmpA-family membrane protein [Yersinia pestis Antiqua] gi|115346324|emb|CAL19195.1| putative OmpA-family membrane protein [Yersinia pestis CO92] gi|149289856|gb|EDM39933.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125] gi|165914211|gb|EDR32827.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275] gi|165919952|gb|EDR37253.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992255|gb|EDR44556.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206724|gb|EDR51204.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960039|gb|EDR56060.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049331|gb|EDR60739.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054571|gb|EDR64379.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682080|gb|EEO78172.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516] gi|229690793|gb|EEO82847.1| putative OmpA-family membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229696769|gb|EEO86816.1| putative OmpA-family membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705844|gb|EEO91853.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A] gi|262360640|gb|ACY57361.1| hypothetical protein YPD4_0452 [Yersinia pestis D106004] gi|270336391|gb|EFA47168.1| OmpA family protein [Yersinia pestis KIM D27] gi|294353068|gb|ADE63409.1| hypothetical protein YPZ3_0499 [Yersinia pestis Z176003] Length = 536 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250 + I TL +++ + +G L +LI D F + E I Sbjct: 356 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 411 Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306 ++++G LA I + GHTD PFR+ +N +LS RA L + ++E Sbjct: 412 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 471 Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R G + NRR+DIL Sbjct: 472 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 506 >gi|110639062|ref|YP_679271.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110281743|gb|ABG59929.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 380 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 19/149 (12%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTP------------MFDKSSSIPLPETIVVLQK 254 D + GV + ++I I+ +F +S S LP+ L Sbjct: 236 KKDTLNNGVYAIQYKKPVVIEIVADTAPAYIKVDRVVLKNLLFSQSKSELLPQAAKELDM 295 Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 I E + T+ + GHTD A+ N LS R L+ G++ DRI + Sbjct: 296 IAEWMNRETDVRVRFIGHTDNQ---GDAKLNVLLSEQRVSKVKAYLVSKGIAADRIETV- 351 Query: 314 GFAHHRLKIAS--DPMNSANRRIDILVED 340 G+ + + NRR+++ + Sbjct: 352 GYGGAFPITDNAFEETRKLNRRVEMEILK 380 >gi|115526690|ref|YP_783601.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115520637|gb|ABJ08621.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53] Length = 165 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + P+ I L+K + L +I GH D N L R Sbjct: 57 DRVFFESDQTDLSPQAIATLEKQAQWLQQYNRYAFTIEGHADER---GTREYNIALGARR 113 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A S L G+ R+ IS + R +D S NRR Sbjct: 114 AQSVRSYLASRGIDASRMRTIS-YGKERPVAVCNDISCWSQNRR 156 >gi|325287332|ref|YP_004263122.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324322786|gb|ADY30251.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 647 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 12/113 (10%) Query: 237 FDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +SS E+ L K+ +L + T VI + HTD++ N LS RA S Sbjct: 539 FDTNSSYLRVESYPDLDKVANYMLENPTVVIEVGAHTDSTE---SDTYNLWLSNRRAKST 595 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341 + L+ GV RI+ I GF +L S+ ++ NRR + ++ ++ Sbjct: 596 VKYLVSKGVDASRITGI-GFGESQLLNKCKNGVKCSNEEHAVNRRSEFIIINK 647 >gi|319899363|ref|YP_004159460.1| Outer membrane lipoprotein omp16 homolog precursor [Bartonella clarridgeiae 73] gi|319403331|emb|CBI76890.1| Outer membrane lipoprotein omp16 homolog precursor [Bartonella clarridgeiae 73] Length = 172 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 39/109 (35%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + F +SS + +L + E L +I GH D N L R Sbjct: 62 DRVFFSLNSSSIELDAEYILARQAEWLLRYPHYFVTIEGHADER---GTREYNLALGQRR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338 A + L+ GVS R+ IS + R + NRR ++V Sbjct: 119 AVAVRDHLISLGVSSQRMKTIS-YGKERPVALCDDISCWNQNRRAVLVV 166 >gi|332877818|ref|ZP_08445556.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684113|gb|EGJ56972.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 680 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 34/145 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 I+ + + S+ + + L + ++ + + + H D +R N Sbjct: 512 ITAPVLVDNVFYAFDSAELTDSSTLALDSLVTLMEDNPNITIELSSHCD---YRGRDEYN 568 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-------------ASDPM---- 327 RLS RA S + L+ GV+ DR++ I G+ R K+ +D + Sbjct: 569 IRLSQRRAESVVKYLIAHGVATDRLTPI-GYGETRPKVIRKRLTERYPFLHENDTLTEAF 627 Query: 328 ------------NSANRRIDILVED 340 N+ NRR + V Sbjct: 628 IKKLPEEQQEICNALNRRTEFRVLR 652 >gi|330998288|ref|ZP_08322113.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841] gi|329568677|gb|EGG50478.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841] Length = 673 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 34/145 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 I+ + + S+ + + L + ++ + + + H D +R N Sbjct: 512 ITAPVLVDNVFYAFDSAELTDSSTLALDSLVTLMEDNPNITIELSSHCD---YRGRDEYN 568 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-------------ASDPM---- 327 RLS RA S + L+ GV+ DR++ I G+ R K+ +D + Sbjct: 569 IRLSQRRAESVVKYLIAHGVATDRLTPI-GYGETRPKVIRKRLTERYPFLHENDTLTEAF 627 Query: 328 ------------NSANRRIDILVED 340 N+ NRR + V Sbjct: 628 IKKLPEEQQEICNALNRRTEFRVLR 652 >gi|330830630|ref|YP_004393582.1| major outer membrane protein OmpAI [Aeromonas veronii B565] gi|328805766|gb|AEB50965.1| Major outer membrane protein OmpAI [Aeromonas veronii B565] Length = 339 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 32/299 (10%), Positives = 79/299 (26%), Gaps = 33/299 (11%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + N F T + G R + + + +G+ Sbjct: 51 QEDAAAANAFMGYNFTENFGTELGYQYTGRGNTDGNRYESQGATLSGIARMPVGNDFSLF 110 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + ++ + + + DL+ + + E+ Sbjct: 111 AEGGAYWGHTDGLGTSDTKVSPLAGAG---VTYKVNDALDLQARYRYMWDVADLHANGER 167 Query: 183 ILAMKRKKRLQDLAK-----KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 A + L+ + ++ + +V + + + +F Sbjct: 168 YKANQSIATLEAVYHPFRTSYVAPVAAPVVEEAPAPAPQVVEKNFAL-------NSDVLF 220 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 PE + L + + + + G+TD N +LS RA + Sbjct: 221 AFGKDTLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLSEARART 277 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDILVEDRQ 342 L+ G++ ++ I G + + +RR+++ V Q Sbjct: 278 VANFLVSKGMAASKV-AIEGRGEANPVTGTKCNGVTAKAQLISCLAPDRRVEVRVSGVQ 335 >gi|254496705|ref|ZP_05109568.1| conserved hypothetical protein [Legionella drancourtii LLAP12] gi|254354133|gb|EET12805.1| conserved hypothetical protein [Legionella drancourtii LLAP12] Length = 293 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 10/136 (7%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKS--SSIPLPETIVVLQKIGEVLAHSTEVISIR 269 ++ +L D+ +F S E L++I + +A ++ IR Sbjct: 162 KPYSRYQQCVGNLLPFGYDRVKESVFHFGPDSRELTDEDKAQLRRIAQYVAADMQIKVIR 221 Query: 270 --GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 G+ D S + N +S DRA L+ GV E+++ ++ F + +D Sbjct: 222 VVGYADESGRKG---YNNAISQDRAQVVQNYLITLGVPEEQL-SVTWFGALKPVARNDTD 277 Query: 327 -MNSANRRIDILVEDR 341 + NRR+ I + + Sbjct: 278 AGRALNRRVVISLIKK 293 >gi|184159409|ref|YP_001847748.1| outer membrane protein [Acinetobacter baumannii ACICU] gi|332876249|ref|ZP_08444024.1| outer membrane protein Omp38 [Acinetobacter baumannii 6014059] gi|183211003|gb|ACC58401.1| Outer membrane protein [Acinetobacter baumannii ACICU] gi|322509321|gb|ADX04775.1| Outer membrane protein omp38 precursor [Acinetobacter baumannii 1656-2] gi|323519348|gb|ADX93729.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715] gi|332735521|gb|EGJ66573.1| outer membrane protein Omp38 [Acinetobacter baumannii 6014059] Length = 356 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 231 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 287 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + + NRR+ + + Sbjct: 288 NSVKSALVNEYNVDASRLST-QGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339 >gi|167578218|ref|ZP_02371092.1| OmpA family domain protein [Burkholderia thailandensis TXDOH] Length = 333 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + PE+ L ++ ++L + + I GHTD N LS RA + Sbjct: 231 FDTDKAQVKPESKAQLDEMAKLLTANPNLKVYIVGHTDNQ---GQFAHNVDLSQKRADAV 287 Query: 296 YQVL-MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 Q L ++ R+ G A ++ + + NRR++++ Sbjct: 288 AQTLATTYRIAPGRLVA-KGVASLSPVASNGDEAGRAQNRRVELV 331 >gi|223038721|ref|ZP_03609014.1| Omp18 [Campylobacter rectus RM3267] gi|222880123|gb|EEF15211.1| Omp18 [Campylobacter rectus RM3267] Length = 189 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 9/151 (5%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 ++ + + + + ++ SI Q T FD + V+ Sbjct: 42 EVDMSADANQNMGNMGSSDNMMSDSERLQQLISSIEGQVQTVYFDFDKFNIKGDMQPVIN 101 Query: 254 KIGEVLAHSTEV---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + S + I G+ D N+ L L RA +A L+K GV+ DRI Sbjct: 102 TNAGLFNQSEAQALSVKIEGNCDEW---GTDEYNYALGLKRAKAAKDALVKQGVAADRIM 158 Query: 311 KISGFAHHRLKIASDPMN--SANRRIDILVE 339 +S + + NRR + V Sbjct: 159 VVS-YGESNPVCTDKTKACDAQNRRAEFKVL 188 >gi|254457162|ref|ZP_05070590.1| outer membrane protein, putative [Campylobacterales bacterium GD 1] gi|207085954|gb|EDZ63238.1| outer membrane protein, putative [Campylobacterales bacterium GD 1] Length = 195 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 60/149 (40%), Gaps = 9/149 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISII--DQRNTPMFDKSSSIPLPETIVVLQ 253 +S L I+ + +L + + F SS E+I ++ Sbjct: 51 KAWQKVEISNLDKKEILSKESVQNEYKTLLDEMPKEAKNYRLYFKFDSSDMTSESIATIE 110 Query: 254 KIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 KI + + + I + G+TD A N LS+ RA + +VL +GV+ +I + Sbjct: 111 KIIKDIEANNILQIDVIGYTDR---AGKAAYNKVLSMKRAKNVIKVLTDNGVN-SKIISL 166 Query: 313 SGFAHHRLKIASDPMNS--ANRRIDILVE 339 + I +D + NRR++I ++ Sbjct: 167 DYYGEANPIIETDDGVAKKRNRRVEITLK 195 >gi|163787037|ref|ZP_02181484.1| membrane protein, OmpA family [Flavobacteriales bacterium ALC-1] gi|159876925|gb|EDP70982.1| membrane protein, OmpA family [Flavobacteriales bacterium ALC-1] Length = 531 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 8/112 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290 + +FD S PE ++ L+++ + ++ + + I GHTD + +N LSL Sbjct: 422 DSKVLFDSGKSELKPEGLLALKELAKNISVLKSGNVIIEGHTDDV---GSSENNKNLSLA 478 Query: 291 RAYSAYQVLMKSGVSEDRIS-KISGFAHHRLKIASDPM--NSANRRIDILVE 339 RA S L K + + G+ + + ++ + NRR++IL+ Sbjct: 479 RAKSVSTELKKL-IPSKTFKWREKGYGEKKPLVENNSEKNRTKNRRVEILIL 529 >gi|157960967|ref|YP_001501001.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC 700345] gi|157845967|gb|ABV86466.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345] Length = 198 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + + LP ++ I L + I + GHTD+ A N +LSL RA Sbjct: 95 FGFAQADILPSQEQTIEVIARWLKSTRVSIQLVGHTDSI---GDASFNLQLSLKRAEQVK 151 Query: 297 QVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 +V ++ G + DR +I+G + NRR++ LV Sbjct: 152 KVFVEQFGFAADRF-QINGVGSSLPVANNQTAFGREQNRRVEFLV 195 >gi|37704644|gb|AAR01594.1| OprF [Pseudomonas sp. MFY107] Length = 316 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + GHT Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESARVQSV-GYGESRPVA 316 >gi|53802737|ref|YP_115490.1| outer membrane protein MopB [Methylococcus capsulatus str. Bath] gi|4104020|gb|AAD01925.1| MopB [Methylococcus capsulatus] gi|53756498|gb|AAU90789.1| outer membrane protein MopB [Methylococcus capsulatus str. Bath] Length = 348 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 40/126 (31%), Gaps = 13/126 (10%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTD 273 ++ I I + F S+ +L + E L E I GHT Sbjct: 228 KVDSDGCLIRIELHGVN----FKYDSAELTDSAKRILDETAENLILFPEKRDIEVAGHTS 283 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSAN 331 N RLS+ RA+S L GV G+ + N Sbjct: 284 TE---GTNEYNMRLSIRRAHSVADYLKAKGV--TNQLYPKGYGEEYPLVPEHSEADREKN 338 Query: 332 RRIDIL 337 RR++++ Sbjct: 339 RRVELI 344 >gi|312795445|ref|YP_004028367.1| outer membrane protein [Burkholderia rhizoxinica HKI 454] gi|312167220|emb|CBW74223.1| Outer membrane protein [Burkholderia rhizoxinica HKI 454] Length = 243 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 14/117 (11%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ P L + + + + G+TD + N LSL RA + Sbjct: 104 LFDFDKAVLKPAGKEKLDDLASKIQDLNLEVVVATGYTDKI---GSDKYNDHLSLRRAQA 160 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMN-------SANRRIDILVEDRQ 342 L+ + +RI G + + + NRR+++ V + Sbjct: 161 VKAYLVSKDIPANRIYT-EGKGKRNPVVTDCNQKNRKALIACLAPNRRVEVEVVGTK 216 >gi|312132093|ref|YP_003999433.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132] gi|311908639|gb|ADQ19080.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132] Length = 165 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 9/110 (8%) Query: 237 FDKSSSIP--LPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 F +S P+ L L + + GHTD N LSL+R Sbjct: 60 FQSASLEIIRTPQLEEWLSLAKNYLEENPGERLVLTGHTDNE---GTEESNLNLSLERGN 116 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 ++L G S + + ++ G +D NRR+ I + R Sbjct: 117 RVKEILSAEGFSAESL-EVEGKGQSEPIAGNDTPEGMQKNRRVSIRLLKR 165 >gi|270261236|ref|ZP_06189509.1| outer membrane protein A, precursor [Serratia odorifera 4Rx13] gi|270044720|gb|EFA17811.1| outer membrane protein A, precursor [Serratia odorifera 4Rx13] Length = 359 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 27/135 (20%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + P+ L ++ L+ + + G+TDA + N +LS Sbjct: 229 KSDVLFNFNKATLKPQGQQALDQLYSQLSSMDPKDGSVVVLGYTDAV---GSDQYNQKLS 285 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMN-----SANRRID 335 RA S L+ G+ D+IS G + + +RR++ Sbjct: 286 EKRAQSVVDYLVSKGIPSDKISA-RGMGEADSVTGNTCGYKAGRATKAQIACLAPDRRVE 344 Query: 336 I-------LVEDRQG 343 I +V QG Sbjct: 345 IEVKGIKDVVTQPQG 359 >gi|288957826|ref|YP_003448167.1| peptidoglycan-associated lipoprotein [Azospirillum sp. B510] gi|288910134|dbj|BAI71623.1| peptidoglycan-associated lipoprotein [Azospirillum sp. B510] Length = 155 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + F PE L + + L +++ GH D N L R Sbjct: 50 DRVFFGLDRFDLSPEARATLDRQAKWLQTYGSVTVTVEGHADER---GTREYNLALGERR 106 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333 A S L G+ R++ +S + R +++ S NRR Sbjct: 107 ANSVKNYLAAKGIPASRVNVVS-YGKERPAVVGSNEAAWSQNRR 149 >gi|269963652|ref|ZP_06177975.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269831665|gb|EEZ85801.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 218 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 10/157 (6%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + KK+ S + N + + +++ + +Q + F S+ ++ Sbjct: 69 AQAPSAMGKKLQGVTSLEMFLNRHQIAHETISGDHLMVRLKEQVH---FQTGSARLSSQS 125 Query: 249 IVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 L+ +G LA T+V + GH D++ A N LS RA + L+ + + Sbjct: 126 EDWLRNLGHYLAGRTDVDVVIDGHADST---GAATFNDSLSEKRAREVEKQLLATSLPRQ 182 Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 R+ GF + + ++ + NRR+++++ Q Sbjct: 183 RVFS-RGFGEYVPQCSNATASGKACNRRVELMLIVDQ 218 >gi|261344255|ref|ZP_05971899.1| outer membrane protein A [Providencia rustigianii DSM 4541] gi|282567857|gb|EFB73392.1| outer membrane protein A [Providencia rustigianii DSM 4541] Length = 353 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288 R+ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 225 RSDVLFNFNKASLKPEGQQALNELYNELSNIDPTQGRVLVVGFTDRI---GSQNYNLPLS 281 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ GV I G + + +RR++I Sbjct: 282 QKRAQSVVDYLVAKGVPASAI-AAEGRGKEDPVTGNKCDAVKGRAALIECLAPDRRVEIE 340 Query: 338 VED 340 ++ Sbjct: 341 IQG 343 >gi|197119091|ref|YP_002139518.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem] gi|197088451|gb|ACH39722.1| OmpA family outer membrane protein, DUF11 domain-containing protein [Geobacter bemidjiensis Bem] Length = 2000 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 8/106 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293 F S E +L+ VL + + GHTD N LS R Sbjct: 1729 GAFVFDRSELTLEAKHLLKGAARVLRARPQEKVIVEGHTDGI---GSVEYNMALSQRRCD 1785 Query: 294 SAYQVLM-KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 +A L+ + G++ R+ + + R + P NRR+++ Sbjct: 1786 AAADYLVREEGIAGSRLLR-RWYGKSRPVADNVTTPGRRLNRRVEL 1830 >gi|189426515|ref|YP_001953692.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ] gi|189422774|gb|ACD97172.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ] Length = 188 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 55/174 (31%), Gaps = 14/174 (8%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 +E + +K+++ ++ + + + Sbjct: 23 AKEEVVKKDEPVVEQQTVKQQEPVKPVEVPKQEEPKQEAPKQEEATATAAKASEAVALE- 81 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWR 286 T FD S + L K E L + I I GH D N Sbjct: 82 -----TVYFDFDKSDLRQDARDALSKNAEALLKKVADAKIKIEGHCDER---GSDEYNLA 133 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338 L RA S + L GV DRIS IS + + + + + S NRR + ++ Sbjct: 134 LGDRRAKSVAKYLTTLGVKADRISTIS-YGKEKPAVQGSDEAAWSKNRRAEFVI 186 >gi|153832375|ref|ZP_01985042.1| outer membrane protein [Vibrio harveyi HY01] gi|148871404|gb|EDL70267.1| outer membrane protein [Vibrio harveyi HY01] Length = 284 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/250 (13%), Positives = 78/250 (31%), Gaps = 8/250 (3%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 + + ++ + + L + Q ++ ++L ++ + Sbjct: 26 PDNGKGGMAENYQDISIENYQFSPVMPDEPLGPEHGLRFDWQLTKLHLDALIQEGARWCF 85 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + N+ L + + ++R + + + + + Sbjct: 86 PAAVVQALEKQNRIARELEGGLLLDAANDIVIQRRRLNQLELQLDYVLSQTTCKPPQDIE 145 Query: 217 FETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + I+ +I D N F S+ P+ + L + +L + + GH DA Sbjct: 146 ALRSDLNIVANIYDLLNVDNQFAVDSAEINPKYMGHLAEAAYILRDHPSLSLVVTGHADA 205 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 + N +L+ DRA + L G++ DR+ NR Sbjct: 206 T---GTPEYNQKLAQDRAEQVKRYLNVFGITSDRVQT-KSVGETLPLYDGQTPAVRLTNR 261 Query: 333 RIDILVEDRQ 342 R+ I V + + Sbjct: 262 RVSIEVLNAK 271 >gi|162418688|ref|YP_001607328.1| hypothetical protein YpAngola_A2952 [Yersinia pestis Angola] gi|162351503|gb|ABX85451.1| OmpA domain protein [Yersinia pestis Angola] Length = 535 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250 + I TL +++ + +G L +LI D F + E I Sbjct: 355 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 410 Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306 ++++G LA I + GHTD PFR+ +N +LS RA L + ++E Sbjct: 411 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 470 Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R G + NRR+DIL Sbjct: 471 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 505 >gi|51595006|ref|YP_069197.1| hypothetical protein YPTB0655 [Yersinia pseudotuberculosis IP 32953] gi|153950101|ref|YP_001402377.1| hypothetical protein YpsIP31758_3422 [Yersinia pseudotuberculosis IP 31758] gi|186894007|ref|YP_001871119.1| hypothetical protein YPTS_0678 [Yersinia pseudotuberculosis PB1/+] gi|51588288|emb|CAH19895.1| putative OmpA-family membrane protein [Yersinia pseudotuberculosis IP 32953] gi|152961596|gb|ABS49057.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758] gi|186697033|gb|ACC87662.1| type IV / VI secretion system protein, DotU family [Yersinia pseudotuberculosis PB1/+] Length = 536 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250 + I TL +++ + +G L +LI D F + E I Sbjct: 356 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 411 Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306 ++++G LA I + GHTD PFR+ +N +LS RA L + ++E Sbjct: 412 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 471 Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R G + NRR+DIL Sbjct: 472 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 506 >gi|328542425|ref|YP_004302534.1| outer membrane lipoprotein [polymorphum gilvum SL003B-26A1] gi|326412172|gb|ADZ69235.1| Probable outer membrane lipoprotein [Polymorphum gilvum SL003B-26A1] Length = 155 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 FD+ S+ + + K L + + I+GH D N LS R Sbjct: 41 RRIFFDRGSAELTETARMTIDKQAAWLRANPRWLVKIQGHADD---PGSEAANKALSTKR 97 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340 A + L+ GV R+ I G+ R D + NRR+ + + + Sbjct: 98 AEAVRDALVALGVDGKRMW-IKGYGIERPVTDCDELTCHVQNRRVVVNLRE 147 >gi|269962741|ref|ZP_06177084.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832543|gb|EEZ86659.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 282 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 9/159 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLP 246 +++RL L +++ LS + + + I+ I D N F S+ P Sbjct: 118 QRRRLNQLEQQLDYVLSQ-TTCKPPQDIEALRSDLNIVADIYDLLNVDNQFAVDSAEINP 176 Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + + L + +L + + GH DA+ N +L+ DRA + L G++ Sbjct: 177 KYMGHLAEAAYILRDHPSLSLVVTGHADAT---GTPEYNQKLAQDRAEQVKRYLNVFGIT 233 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 DR+ NRR+ I V + Sbjct: 234 SDRVQT-KSVGETLPLYEGQTPAVRLTNRRVSIEVLNAN 271 >gi|92115867|ref|YP_575596.1| OmpA/MotB [Nitrobacter hamburgensis X14] gi|91798761|gb|ABE61136.1| OmpA/MotB [Nitrobacter hamburgensis X14] Length = 334 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 6/151 (3%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 K L + + + + + V + I + FD + + PE+ Sbjct: 184 KALNERTVALVHIVEPKPREQKMVVVKADEMARSIGATGRIALYGIFFDTAKADLKPESN 243 Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L +I +L + I GHTD N LS RA + + L + E R Sbjct: 244 PTLAEIAGLLNADPKLAVLIVGHTDNQ---GAFDYNLDLSRRRAEAVVKTLAANFRVEPR 300 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDIL 337 + +G ++D + NRR++++ Sbjct: 301 RLRAAGVGMMAPAASNDAEDGRAKNRRVEVV 331 >gi|330830616|ref|YP_004393568.1| putative porin [Aeromonas veronii B565] gi|328805752|gb|AEB50951.1| putative porin [Aeromonas veronii B565] Length = 512 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 62/162 (38%), Gaps = 20/162 (12%) Query: 189 KKRLQDLAKKISSTLSGLVADNI----VKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + RLQ+L + + + + V G++ I D MF S+ Sbjct: 84 QSRLQELDRIAKEENLNIATEKLTVAEPSAVTGVPQDAGLVAQIPDS---GMFAIGSAQL 140 Query: 245 LPETIVVLQKIGEVLAH-------STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + V+ K+ ++ + + I + GH+DA+ A N RLS RA + + Sbjct: 141 TESGLRVVTKLAQLYSKPAAADASNARRILLVGHSDAT---GPAELNLRLSEQRARAVGK 197 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 +L+ SG+ G R + NRR++I+ Sbjct: 198 ILVASGIPAS-FIYYQGAGSSRPIADNSDPLLRGQNRRVEIV 238 >gi|83716533|ref|YP_439774.1| OmpA family domain-containing protein [Burkholderia thailandensis E264] gi|167616356|ref|ZP_02384990.1| OmpA family domain protein [Burkholderia thailandensis Bt4] gi|257142917|ref|ZP_05591179.1| OmpA family domain-containing protein [Burkholderia thailandensis E264] gi|83650358|gb|ABC34422.1| OmpA family domain protein [Burkholderia thailandensis E264] Length = 333 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + PE+ L ++ ++L + + I GHTD N LS RA + Sbjct: 231 FDTDKAQVKPESKAQLDEMAKLLTANPNLKVYIVGHTDNQ---GQFAHNVDLSQKRADAV 287 Query: 296 YQVL-MKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 Q L ++ R+ G A ++ + + NRR++++ Sbjct: 288 AQTLATTYRIAPGRLVA-KGVASLSPVASNGDEAGRAQNRRVELV 331 >gi|332300756|ref|YP_004442677.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] gi|332177819|gb|AEE13509.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] Length = 147 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285 + N F K + E +VL + + + + + + GHT N Sbjct: 39 ELEQNFNDVKFAKGKADLTREAQLVLCDLAKFMESHSGLKLKLEGHTSEE---GDETFNQ 95 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 RLS RA +A L+ GVS +R+ G NRR + +V Sbjct: 96 RLSEARAQAAVDFLISQGVSAERLEA-EGKGSTDPIDPDSLE--VNRRTEFVV 145 >gi|306844687|ref|ZP_07477272.1| peptidoglycan-associated lipoprotein [Brucella sp. BO1] gi|306274859|gb|EFM56629.1| peptidoglycan-associated lipoprotein [Brucella sp. BO1] Length = 168 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS+ + L K + L + I+I GH D N L R Sbjct: 59 DRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADER---GTREYNLALGQRR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A + L GV +R+ IS + + R +D S NRR + V + G Sbjct: 116 AAATRDFLASRGVPTNRMRTIS-YGNERPVAVCDADSCWSQNRRA-VTVLNGAG 167 >gi|258624563|ref|ZP_05719502.1| outer membrane protein, putative [Vibrio mimicus VM603] gi|262165799|ref|ZP_06033536.1| outer membrane protein [Vibrio mimicus VM223] gi|262171367|ref|ZP_06039045.1| outer membrane protein [Vibrio mimicus MB-451] gi|258583156|gb|EEW07966.1| outer membrane protein, putative [Vibrio mimicus VM603] gi|261892443|gb|EEY38429.1| outer membrane protein [Vibrio mimicus MB-451] gi|262025515|gb|EEY44183.1| outer membrane protein [Vibrio mimicus VM223] Length = 212 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 7/179 (3%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + + + L+D L D + + S Sbjct: 24 GEYLQHEGDEYDYRPTPLANQVADLKDDDNDGVINARDLCPDTPRGSEIDNDGCGTFIKS 83 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 Q+ +F SS+ P + ++++ E L I ++G+ A N Sbjct: 84 SQMQQLHILFANDSSVIEPAFLTQIRQMAEFLQGYPSTSIELQGYASKV---GRAEYNLA 140 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 LS R+ + L++ GV+ +R++ I G+ L D ++ NRR+ V +G Sbjct: 141 LSKQRSETVRDQLIRYGVAPNRVN-IVGYGDSVLVAEGEDDISHARNRRVTATVVGYKG 198 >gi|258545330|ref|ZP_05705564.1| OmpA family protein [Cardiobacterium hominis ATCC 15826] gi|258519433|gb|EEV88292.1| OmpA family protein [Cardiobacterium hominis ATCC 15826] Length = 244 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 8/110 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 ++ +FD ++ P L I + L E + + G TD + N +LS Sbjct: 128 QSEVLFDVDKAVIKPNFYQPLGSIAQTLQQYPETVVHVYGFTD---GSGSPQHNLQLSQR 184 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 RA S Q L + G++ R + G+ ++P + RR+ I ++ Sbjct: 185 RAQSVAQYLAQQGINSQRFV-VQGYGEQYASAENNPQD---RRVAIYIKA 230 >gi|163800343|ref|ZP_02194244.1| putative protein F-related protein [Vibrio sp. AND4] gi|159175786|gb|EDP60580.1| putative protein F-related protein [Vibrio sp. AND4] Length = 209 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 63/152 (41%), Gaps = 10/152 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + KK +S N + +++ + +Q + F SS ++ Sbjct: 61 QAQNSMEKKSDGMMSLERFLNRHQIAHETINGEHLMVRLKEQVH---FQTGSSRLSAQSQ 117 Query: 250 VVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +Q +G LA T++ + GH D+ A N LS RA + L+++ + R Sbjct: 118 GWIQSLGHYLAKRTDIDVVVNGHADS---AGAASFNDSLSEKRAREVEKQLLETSLPRQR 174 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + GF + + ++ + NRR+++++ Sbjct: 175 VFS-RGFGEYVPQCSNATASGKACNRRVELML 205 >gi|254251106|ref|ZP_04944424.1| Outer membrane protein [Burkholderia dolosa AUO158] gi|124893715|gb|EAY67595.1| Outer membrane protein [Burkholderia dolosa AUO158] Length = 557 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 9/121 (7%) Query: 226 ISIIDQRNTPMFDKSSSIPLP-ETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARD 283 ++ + + P+F + + L + +L + + I GH D+ Sbjct: 437 VTTLQLDSLPLFARGKATFSAARARRELAHVLRLILQNPDHRVLIEGHADSE---GSPDA 493 Query: 284 NWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 N+RLS RA + L ++ G+ RI I G R + NRR+D+ + Sbjct: 494 NFRLSEARARAIRDWLVVEGGLPITRI-AIQGMGDLRPIGDNATEAGRALNRRVDVSLIP 552 Query: 341 R 341 Sbjct: 553 D 553 >gi|84501653|ref|ZP_00999825.1| peptidoglycan-associated lipoprotein [Oceanicola batsensis HTCC2597] gi|84390274|gb|EAQ02833.1| peptidoglycan-associated lipoprotein [Oceanicola batsensis HTCC2597] Length = 171 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F S E L + L +++ ++ GH D N L R Sbjct: 61 DRVLFAVDQSTLSDEARATLNAQAQWLMTNSDYTAVIEGHADEQ---GTREYNLALGARR 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A +A + L+ GV+ R+ ++ + R +++ + NRR Sbjct: 118 ANAAREYLITQGVAASRLKTVT-YGKERPIEICSTESCYAKNRR 160 >gi|299773253|gb|ADJ38701.1| outer membrane protein P5 [Haemophilus parasuis] Length = 365 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|332300857|ref|YP_004442778.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] gi|332177920|gb|AEE13610.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] Length = 665 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 34/139 (24%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288 +Q + +D + PE L + +L + +V + HTD + N +LS Sbjct: 529 EQIHDIYYDFDRASLRPEGKKSLDYLITLLEQNPDVRLELSSHTDR---KGSQAYNQKLS 585 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA------------------ 330 RA S L+ G++ DR+ G+ R + + M + Sbjct: 586 QRRAQSVVDYLIAKGIAADRLEA-RGYGKERPYVVTKGMAARFDWLPEGQELTAEWVDTL 644 Query: 331 -----------NRRIDILV 338 NRR + V Sbjct: 645 TEEQQIVCDQLNRRTEFTV 663 >gi|121608000|ref|YP_995807.1| OmpA domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121552640|gb|ABM56789.1| OmpA domain protein [Verminephrobacter eiseniae EF01-2] Length = 182 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 FD S + PE +++ + + + + GHTD N L R Sbjct: 77 RIVYFDYDSYVIKPEFQTLIEAHSRFIKTDTKRKLMLEGHTDER---GGREYNLSLGQKR 133 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 A + + L GV + ++ +S F +L + + NRR+++ Sbjct: 134 AEAVRRALGLLGVPDSQMEAVS-FGKEKLAVQGHTEEAHAQNRRVEMT 180 >gi|315223626|ref|ZP_07865480.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287] gi|314946407|gb|EFS98402.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287] Length = 652 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + FD + S P+ V L KI EV+ ++ IR HTD+ N LS Sbjct: 537 EIKEIYFDLNKSNIRPDAAVELAKIVEVMKQYPKMKIDIRSHTDSR---ATDAYNLALSD 593 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 RA + + ++K G+ R+ G+ +L ++ + ANRR + +V Sbjct: 594 RRAKATLEWIVKQGIDRKRLKA-KGYGETQLVNGCSNGVPCTEEQHQANRRSEFIVVS 650 >gi|312270731|gb|ADQ55766.1| OmpA [Haemophilus parasuis] gi|312270733|gb|ADQ55767.1| OmpA [Haemophilus parasuis] Length = 367 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|312270729|gb|ADQ55765.1| OmpA [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|312270717|gb|ADQ55759.1| OmpA [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLENPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|312270711|gb|ADQ55756.1| OmpA [Haemophilus parasuis] gi|312270713|gb|ADQ55757.1| OmpA [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|299773243|gb|ADJ38696.1| outer membrane protein P5 [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|209968914|gb|ACJ02818.1| outer membrane protein P5 [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLENPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|209968906|gb|ACJ02814.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968938|gb|ACJ02830.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968940|gb|ACJ02831.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968948|gb|ACJ02835.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968950|gb|ACJ02836.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968952|gb|ACJ02837.1| outer membrane protein P5 [Haemophilus parasuis] gi|312270695|gb|ADQ55748.1| OmpA [Haemophilus parasuis] gi|312270697|gb|ADQ55749.1| OmpA [Haemophilus parasuis] gi|312270699|gb|ADQ55750.1| OmpA [Haemophilus parasuis] gi|312270701|gb|ADQ55751.1| OmpA [Haemophilus parasuis] gi|312270703|gb|ADQ55752.1| OmpA [Haemophilus parasuis] gi|312270705|gb|ADQ55753.1| OmpA [Haemophilus parasuis] gi|312270707|gb|ADQ55754.1| OmpA [Haemophilus parasuis] gi|312270709|gb|ADQ55755.1| OmpA [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|209968898|gb|ACJ02810.1| outer membrane protein P5 [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|256820526|ref|YP_003141805.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256582109|gb|ACU93244.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271] Length = 650 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + FD + S P+ V L KI EV+ ++ IR HTD+ N LS Sbjct: 535 EIKEIYFDLNKSNIRPDAAVELAKIVEVMKQYPKMKIDIRSHTDSR---ATDAYNLALSD 591 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 RA + + ++K G+ R+ G+ +L ++ + ANRR + +V Sbjct: 592 RRAKATLEWIVKQGIDRKRLKA-KGYGETQLVNGCSNGVPCTEEQHQANRRSEFIVVS 648 >gi|224714303|gb|ACN62146.1| outer membrane protein A [Haemophilus parasuis] gi|224714305|gb|ACN62147.1| outer membrane protein A [Haemophilus parasuis] gi|224714307|gb|ACN62148.1| outer membrane protein A [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|209968910|gb|ACJ02816.1| outer membrane protein P5 [Haemophilus parasuis] gi|209968944|gb|ACJ02833.1| outer membrane protein P5 [Haemophilus parasuis] gi|224714273|gb|ACN62131.1| outer membrane protein A [Haemophilus parasuis] gi|224714279|gb|ACN62134.1| outer membrane protein A [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|218709383|ref|YP_002417004.1| putative outer membrane protein [Vibrio splendidus LGP32] gi|218322402|emb|CAV18555.1| putative outer membrane protein [Vibrio splendidus LGP32] Length = 204 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 50/119 (42%), Gaps = 6/119 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285 S ++ +F S+ P + ++++ L I ++G+ A N Sbjct: 76 SSEEKDLHILFANDSAEIKPVFLSQIRQMAAFLKRYENTSIQLQGYASKV---GNAEYNL 132 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSANRRIDILVEDRQG 343 +LS +RA + + L+ +G+ R+ + G+ ++ ++ NR++ V +G Sbjct: 133 KLSEERAVNVRRALISNGIPPSRVYTV-GYGDAGFLDNDTETNHALNRKVVASVVGFKG 190 >gi|253700147|ref|YP_003021336.1| hypothetical protein GM21_1522 [Geobacter sp. M21] gi|251774997|gb|ACT17578.1| conserved repeat domain protein [Geobacter sp. M21] Length = 1984 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 8/106 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S E +L+ VL E + + GHTD N LS R Sbjct: 1713 GAFVFDRSELTLEAKRLLKGAARVLRARPREKVIVEGHTDGI---GSVEYNMALSQRRCD 1769 Query: 294 SAYQVLM-KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 +A L+ + G++ R+ + + R + P NRR+++ Sbjct: 1770 AAADYLVREEGIARSRLLR-RWYGKSRPVADNVTSPGRRMNRRVEL 1814 >gi|320156464|ref|YP_004188843.1| outer membrane protein SypB [Vibrio vulnificus MO6-24/O] gi|319931776|gb|ADV86640.1| outer membrane protein SypB [Vibrio vulnificus MO6-24/O] Length = 280 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 9/158 (5%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLP 246 ++KRL L +++ LS + + I+ + D N F +S+ P Sbjct: 115 QRKRLHQLEQQLDYVLS-HTRCVPPRDEDAFRFQLDIVNELYDILNIDNQFAVNSAEINP 173 Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + + L K +L T +++ GH DA+ N +L++DRA + L G+ Sbjct: 174 KYMGHLAKAANILREHTALTLTVTGHADAT---GNEAYNEKLAMDRAEQVKRYLAIFGLD 230 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 +RI+ S + NRR+ I ++ Sbjct: 231 PNRITTYS-LGEKLPLFDGESAAVRLTNRRVSIEIQSP 267 >gi|228018149|gb|ACP52753.1| fibronectin-binding protein [Campylobacter jejuni] gi|228018157|gb|ACP52757.1| fibronectin-binding protein [Campylobacter jejuni] gi|228018163|gb|ACP52760.1| fibronectin-binding protein [Campylobacter jejuni] Length = 211 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 5/93 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 123 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 179 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 L K GV + RI + G+ + ++D Sbjct: 180 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKE 211 >gi|288940835|ref|YP_003443075.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM 180] gi|288896207|gb|ADC62043.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180] Length = 351 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 13/163 (7%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 +A + LS + + +V + + G+ + + FD Sbjct: 194 ALQDNFADSAAGNRVAIFVEEVLSQPMRERMVS-IEAKEMAQGLSDAGRIAVHGIQFDFD 252 Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 + E+ L++I +L + + + I GHTD N LS RA + L Sbjct: 253 QATIKDESKPQLEQIALMLVENPDLKLYIVGHTDNR---GTLEYNMDLSRRRAEEVVRTL 309 Query: 300 M-KSGVSEDRISK--ISGFAHHRLKIASDPMNSA--NRRIDIL 337 + G+ +R+ ++G A ++ NRR++I+ Sbjct: 310 IQSYGILGERLKPMGVAGLA---PLTSNATEAGRALNRRVEIV 349 >gi|86131405|ref|ZP_01050003.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85817850|gb|EAQ39018.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 568 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 12/114 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 N ++D P+ L ++ + + + + + HTD+ N LS +R Sbjct: 456 NNILYDLDKYDIRPDARPELNRLAQFMKDNPGIRVEVSSHTDSR---ASDSYNQTLSQNR 512 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 A +A ++ GVS +I G+ RL S+ + NRR ++ V Sbjct: 513 ANAAVDYVVSQGVSRSKI-TGKGYGESRLLNECADGVSCSETKHQINRRTEMKV 565 >gi|37704602|gb|AAR01573.1| OprF [Pseudomonas sp. MFY31] Length = 316 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + GHT Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESARVQSV-GYGESRPVA 316 >gi|88800697|ref|ZP_01116256.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Reinekea sp. MED297] gi|88776561|gb|EAR07777.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Reinekea sp. MED297] Length = 294 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLS 288 +++T FD L I L I + GH+D+ DN RLS Sbjct: 167 RQSTVRFDGGGDGLDARARSQLDDIVTYLKADPLITAIYVDGHSDSV---GTRYDNRRLS 223 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 RAY L+ +G+ I +++ + NRR+ Sbjct: 224 ERRAYRVTDYLVNAGIDAAMILT-RYHGERYPIASNETAAGRAQNRRV 270 >gi|84515818|ref|ZP_01003179.1| OmpA domain protein [Loktanella vestfoldensis SKA53] gi|84510260|gb|EAQ06716.1| OmpA domain protein [Loktanella vestfoldensis SKA53] Length = 637 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 78/297 (26%), Gaps = 11/297 (3%) Query: 49 LVMWIINATDDDTKKAIEQYFN---PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH 105 +++ + T+ P L + D+Q + Sbjct: 307 VILVALPGTEQGIFDNAIGELENSLPDVFALTAELPKLPDDQAAGPPQFTATLSPEGHVQ 366 Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + D + + + + R + L + ++ Sbjct: 367 LRGRMPDDLTNMVAENFATAKFGQRNITMRTRVVDDLPVGWSVRVLAGIEALSELSNGIV 426 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI- 224 + + E A + + L + L + + T I Sbjct: 427 VVEPQTITVRGNTGNETATAEISRLMIDKLGQSADFDLDIGYVEALDPIAALPTPDQCIA 486 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 I + FD S+ V+ I EVL + I + G+TD+ Sbjct: 487 QIIAMTDGRKITFDPGSASITAAAQPVIDDIAEVLRLCGDLRIRVAGYTDSQ---GREAM 543 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 N RLS DRA + L V + G+ + NRRI+ + Sbjct: 544 NLRLSQDRADAVLTALRARRVPVSTFEAV-GYGIADPIADNATEAGREANRRIEFSL 599 >gi|328542545|ref|YP_004302654.1| Omp16 protein [polymorphum gilvum SL003B-26A1] gi|326412291|gb|ADZ69354.1| Omp16 protein [Polymorphum gilvum SL003B-26A1] Length = 161 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 49/143 (34%), Gaps = 12/143 (8%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS- 262 + D + V + + ++ + F + S + L K + L Sbjct: 27 AQTKPDGLDGNVTPGSGQDFVVNV----GDRVFFAEDQSTLSTQARATLDKQAQWLNLYS 82 Query: 263 TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I++ GH D N L RA SA L+ GV+ RI IS + R Sbjct: 83 RYTITLEGHADER---GTREYNIALGARRANSARDYLVSRGVAASRIRTIS-YGKERPVA 138 Query: 323 --ASDPMNSANRRIDILVEDRQG 343 D S NRR + V + G Sbjct: 139 VCNDDSCWSQNRRA-VTVLNNAG 160 >gi|228018139|gb|ACP52748.1| fibronectin-binding protein [Campylobacter jejuni] gi|228018141|gb|ACP52749.1| fibronectin-binding protein [Campylobacter jejuni] gi|228018143|gb|ACP52750.1| fibronectin-binding protein [Campylobacter jejuni] gi|228018145|gb|ACP52751.1| fibronectin-binding protein [Campylobacter jejuni] gi|228018147|gb|ACP52752.1| fibronectin-binding protein [Campylobacter jejuni] gi|228018151|gb|ACP52754.1| fibronectin-binding protein [Campylobacter jejuni] gi|228018153|gb|ACP52755.1| fibronectin-binding protein [Campylobacter jejuni] gi|228018155|gb|ACP52756.1| fibronectin-binding protein [Campylobacter jejuni] gi|228018159|gb|ACP52758.1| fibronectin-binding protein [Campylobacter jejuni] gi|228018161|gb|ACP52759.1| fibronectin-binding protein [Campylobacter jejuni] gi|228018165|gb|ACP52761.1| fibronectin-binding protein [Campylobacter jejuni] Length = 211 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 5/93 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 123 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 179 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 L K GV + RI + G+ + ++D Sbjct: 180 ANELEKYGVEKSRIKTV-GYGQDNPRSSNDTKE 211 >gi|148976136|ref|ZP_01812879.1| outer membrane protein [Vibrionales bacterium SWAT-3] gi|145964531|gb|EDK29785.1| outer membrane protein [Vibrionales bacterium SWAT-3] Length = 277 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 72/207 (34%), Gaps = 11/207 (5%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK----RKKRLQDLAKK 198 K L ++G C + ++I K+ + A ++KRL +L + Sbjct: 66 AKLHLDALIQEGARWCFPAAVVQAIEKQNRIARELQGGLLLDAANDLVIQRKRLNELELQ 125 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + S + F + I F +S P+ + L + + Sbjct: 126 LDYVTSQARCEPPKNENQFRMQLSIIQQLYDLLNVDNQFAHNSIEVNPKYMGKLAEASYI 185 Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + + GH+DA+ N +L+L RA + L G+S RI +S Sbjct: 186 LKDNKSLELIVTGHSDAT---GSEEYNDKLALGRAQQVERYLTIFGLSPSRIKAVS-VGE 241 Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342 + + NRR+ I V + Sbjct: 242 TVPLFEGESEGTRLTNRRVSIEVISPE 268 >gi|42528870|gb|AAS18468.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Gallinarum] Length = 319 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 18/116 (15%) Query: 239 KSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + S PE L ++ L++ + + G TD N LS RA S Sbjct: 204 FNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLSEKRAQSV 260 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDILVED 340 L+ G+ D+IS G + P + +RR++I V+ Sbjct: 261 VDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKG 315 >gi|22127533|ref|NP_670956.1| hypothetical protein y3659 [Yersinia pestis KIM 10] gi|45443397|ref|NP_994936.1| hypothetical protein YP_3665 [Yersinia pestis biovar Microtus str. 91001] gi|21960635|gb|AAM87207.1|AE013969_3 hypothetical [Yersinia pestis KIM 10] gi|45438266|gb|AAS63813.1| conserved hypothetical protein [Yersinia pestis biovar Microtus str. 91001] Length = 545 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 14/155 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRT--GILISIIDQRNTPMFDKSSSIPLPETIV 250 + I TL +++ + +G L +LI D F + E I Sbjct: 365 EPRKINIMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSD----GAFRTGEATLSEEFIN 420 Query: 251 --VLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVL-MKSGVSE 306 ++++G LA I + GHTD PFR+ +N +LS RA L + ++E Sbjct: 421 KKNIERLGLALAPWPGDIEVIGHTDNKPFRSTSGNNNLKLSAARASVVADKLRESTQINE 480 Query: 307 D--RISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R G + NRR+DIL Sbjct: 481 THQREISAIGRGESDPLADNATEEGRKRNRRVDIL 515 >gi|156974515|ref|YP_001445422.1| hypothetical protein VIBHAR_02232 [Vibrio harveyi ATCC BAA-1116] gi|156526109|gb|ABU71195.1| hypothetical protein VIBHAR_02232 [Vibrio harveyi ATCC BAA-1116] Length = 284 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 33/250 (13%), Positives = 77/250 (30%), Gaps = 8/250 (3%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 + + ++ + + L + Q ++ +L ++ + Sbjct: 26 PDNGKGGMAENYQDISIENYQFSPVMPDEPLGPEHGLRFDWQLTKLHLEALIQEGARWCF 85 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + N+ L + + ++R + + + + + Sbjct: 86 PAAVVQALEKQNRIARELEGGLLLDAANDIVIQRRRLNQLELQLDYVLSQTTCKPPQDIE 145 Query: 217 FETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + I+ +I D N F S+ P+ + L + +L + + GH DA Sbjct: 146 ALRSDLNIVANIYDLLNVDNQFAIDSAEINPKYMGHLAEAAYILRDHPSLSLVVTGHADA 205 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 + N +L+ DRA + L G++ DR+ NR Sbjct: 206 T---GTPEYNQKLAQDRAEQVKRYLNVFGITSDRVQT-KSVGETLPLYDGQTPAVRLTNR 261 Query: 333 RIDILVEDRQ 342 R+ I V + + Sbjct: 262 RVSIEVLNAR 271 >gi|258621934|ref|ZP_05716964.1| outer membrane protein, putative [Vibrio mimicus VM573] gi|258585872|gb|EEW10591.1| outer membrane protein, putative [Vibrio mimicus VM573] Length = 212 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 7/189 (3%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 S+ + + + + L+D L D + Sbjct: 14 TASSSSFANQGEYLQHEGDEYDYRPTPLANQVADLKDDDNDGVINARDLCPDTPRGSEID 73 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASP 276 + S Q+ +F SS+ P + ++++ E L I ++G+ Sbjct: 74 NDGCGTFIKSSQMQQLHILFANDSSVIEPAFLTQIRQMAEFLQGYPSTSIELQGYASKV- 132 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRI 334 A N LS R+ + L++ GV+ +R++ I G+ L D ++ NRR+ Sbjct: 133 --GRAEYNLALSKQRSETVRDQLIRYGVAPNRVN-IVGYGDSVLVAEGEDDISHARNRRV 189 Query: 335 DILVEDRQG 343 V +G Sbjct: 190 TATVVGYKG 198 >gi|110598626|ref|ZP_01386892.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031] gi|110339738|gb|EAT58247.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031] Length = 150 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 FD S + + L+ + L + + GH D A N L R Sbjct: 45 GDVFFDFDKSDIRTDAVDQLKTNAQWLQANPSQKVVVEGHCDNR---GTAEYNLALGERR 101 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 A +A ++ G R+ +S + R + + NRR Sbjct: 102 AAAARDFVVNLGTDAARVKTVS-YGEERPFAQGNTEEAWAQNRR 144 >gi|312270719|gb|ADQ55760.1| OmpA [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P + L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|312270715|gb|ADQ55758.1| OmpA [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P + L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|299773235|gb|ADJ38692.1| outer membrane protein P5 [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P + L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|299773229|gb|ADJ38689.1| outer membrane protein P5 [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P + L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKPLIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|294085867|ref|YP_003552627.1| peptidoglycan-associated lipoprotein [Candidatus Puniceispirillum marinum IMCC1322] gi|292665442|gb|ADE40543.1| Peptidoglycan-associated lipoprotein [Candidatus Puniceispirillum marinum IMCC1322] Length = 186 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 NT FD S++ + V L + L + E + + GH D N L R Sbjct: 81 NTVYFDFDSAVLSYDAQVTLSRQSAFLQLNPEAVVVIEGHCDER---GTREYNLALGDRR 137 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333 A +A L+ G+ RI +S + R +++ + NRR Sbjct: 138 ASAARDFLLAKGIDAARIRTVS-YGKERPAMLGSNEESWAKNRR 180 >gi|209968920|gb|ACJ02821.1| outer membrane protein P5 [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P + L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|296126061|ref|YP_003633313.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563] gi|296017877|gb|ADG71114.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563] Length = 266 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 68/176 (38%), Gaps = 18/176 (10%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + R + + I ++ L A+ K V E G +IS+ + F+ Sbjct: 86 GGANADTLPSTDRGYSMGRSIDKAVAVLEAEIKSKKVRVEEDERGFVISLGADQY---FE 142 Query: 239 KSSSIP--LPETIVVLQKIGEVLAHSTEVISIRGHTDASPF------RNIARDNWRLSLD 290 +S+ + K+ +L+ I I GHTD+ +NW LS Sbjct: 143 SASTNIIDSQNNVETFIKLASLLSGIPNEIRIEGHTDSGSIIPGSITEQKFGNNWGLSSA 202 Query: 291 RAYSAYQVL----MKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340 RA + L + + ++ I+G+A R ++D + NRR+DI++ Sbjct: 203 RAMVILEKLFENDQTAKLDRNK-YSIAGYADTRPVASNDLPDGRALNRRVDIVIVR 257 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 32/90 (35%), Gaps = 2/90 (2%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWI-IN-ATDDDTKKAIEQYFNPFGKNLMTA 79 D + W Y DF+T+++ FF+++ ++ + +D + I F + Sbjct: 16 KADTPGPSAPLWLQTYGDFVTLVLTFFVMLLATMSTSVNDSAIQLIATAFQGSFGVMPGG 75 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 + + ++ + ++ Sbjct: 76 ATLSQSKLVYGGANADTLPSTDRGYSMGRS 105 >gi|209968912|gb|ACJ02817.1| outer membrane protein P5 [Haemophilus parasuis] gi|224714271|gb|ACN62130.1| outer membrane protein A [Haemophilus parasuis] Length = 365 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P + L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQV 357 Query: 339 EDRQ 342 + + Sbjct: 358 QGSK 361 >gi|313676000|ref|YP_004053996.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312942698|gb|ADR21888.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 228 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 55/152 (36%), Gaps = 11/152 (7%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + I+ V +++ + V I +D F +S + L + L Sbjct: 85 ESEGYITIEEEIAVKEDMDQLVFSLMPSGAGAILRLDIN----FKQSKAEILENSYGELD 140 Query: 254 KIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 K+ ++ + I + GHTD FR A N RLS R + L VS DRI Sbjct: 141 KLLNMMKEYPNMEIQLEGHTD---FRGSASANMRLSEKRVNAVKSYLTSKNVSSDRIKT- 196 Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 F + + NRR++ + + Sbjct: 197 KAFGGTQPLSRESTEEAKLNNRRVEARILKAE 228 >gi|45758047|gb|AAO85782.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 378 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 255 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 311 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G++ ++ + G+ D + +RR++I V Sbjct: 312 RRAETVANYIVSKGINPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 370 Query: 339 EDRQ 342 + + Sbjct: 371 QGSK 374 >gi|54309710|ref|YP_130730.1| putative peptidoglycan-associated lipoprotein [Photobacterium profundum SS9] gi|46914148|emb|CAG20928.1| putative peptidoglycan-associated lipoprotein [Photobacterium profundum SS9] Length = 174 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q T F ++ + +L+ E L++S++ + + GH D N L Sbjct: 68 QEQTVYFKFDTAEIQADYQAMLEAHAEFLSNSSDVKVIVEGHADER---GTPEYNIALGE 124 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + Q L GVS +IS +S + + + + NRR ++ Sbjct: 125 RRANAVVQYLQALGVSASQISIVS-YGEEKPLVLGHTDADYAKNRRAVLV 173 >gi|262198423|ref|YP_003269632.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262081770|gb|ACY17739.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 1264 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 70/246 (28%), Gaps = 12/246 (4%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + E ++G R +++ + D D C Sbjct: 1025 AGTERGPGGRPGAELGDGGDVDASDRDDDSDGDGISDAVDACPTQLEDLDGYVDTDGCPD 1084 Query: 161 TDLEKSINKEENYFLPPLSKEKILAM--KRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 D ++ ++ P ++ A R + +A + + + Sbjct: 1085 LDNDEDGVRDYLDGCPDVAGVASEAGCPARDRDGDTVADYLDNCPDTPGYEVFHGCSE-- 1142 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASP 276 + I FD + ++ +L + I G+TD Sbjct: 1143 EPLALLTPEHIALTEAVAFDADRVRLRRHARRMFAEVAAILHAHPSLRLIQIEGYTDDR- 1201 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 N R+S RA L+ GV+E R+ + G+ R + NRR+ Sbjct: 1202 --GDLEANLRISQHRAEIVRAFLIARGVAEHRLRAV-GYGSARPIGDNRSERGRELNRRV 1258 Query: 335 DILVED 340 ++ + Sbjct: 1259 ELRILR 1264 >gi|152988440|ref|YP_001349604.1| hypothetical protein PSPA7_4250 [Pseudomonas aeruginosa PA7] gi|150963598|gb|ABR85623.1| probable outer membrane lipoprotein [Pseudomonas aeruginosa PA7] Length = 159 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + P++ L KI L + + + GHTD N +LS R Sbjct: 52 SKVLFGNNLDRLNPDSRTTLTKIARALLDVGIDKVRLEGHTDNY---GDEGYNLKLSERR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A S V ++G+ I ++ G R + NRR+ I+V Sbjct: 109 AESVAAVFREAGMPAANI-EVRGLGMSRPVADNKTRAGRSENRRVAIIV 156 >gi|255318660|ref|ZP_05359891.1| outer membrane protein [Acinetobacter radioresistens SK82] gi|262379115|ref|ZP_06072271.1| outer membrane protein [Acinetobacter radioresistens SH164] gi|17978530|gb|AAK57731.1| OmpA-like protein precursor [Acinetobacter radioresistens] gi|255304342|gb|EET83528.1| outer membrane protein [Acinetobacter radioresistens SK82] gi|262298572|gb|EEY86485.1| outer membrane protein [Acinetobacter radioresistens SH164] Length = 348 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L I GHTD + N RLSL RA Sbjct: 230 RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIDGHTDNT---GPRALNERLSLARA 286 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + + R++ GFA + + NRR+ + + Sbjct: 287 NSVKSSLVNEYNIDPSRLTA-QGFAWDQPIADNSTKEGRAMNRRVFATITGSR 338 >gi|254500568|ref|ZP_05112719.1| OmpA family protein [Labrenzia alexandrii DFL-11] gi|222436639|gb|EEE43318.1| OmpA family protein [Labrenzia alexandrii DFL-11] Length = 193 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 8/156 (5%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 +++++ A + + L S+ FD S+ Sbjct: 37 QGAQEKVEVSADALQRAALENIQKYPGADSPQTIPMYQQLASLRQFNIEITFDFDSARIR 96 Query: 246 PETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 PE+ + I + L + I GHTDA + N LS RA + + L+ + Sbjct: 97 PESYEAVGLIADALHTPYLQGQTFFIVGHTDA---KGDRTYNLELSQRRAQAIREALVTT 153 Query: 303 -GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 V + + G +L+ +DP + NRR+ ++ Sbjct: 154 FQVPGSTLFSV-GLGEEQLRDPADPFAAVNRRVQLI 188 >gi|117920980|ref|YP_870172.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3] gi|117613312|gb|ABK48766.1| OmpA/MotB domain protein [Shewanella sp. ANA-3] Length = 290 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +++ + + L +I E L++ +V + + +TD+ N ++S RA S Sbjct: 184 YEEGGTDLTRFSQQQLSRIQEYLSYDPDVELVLVDAYTDSY---GGRSVNQKVSDKRAES 240 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + SG+ +DRI + G R ++D + NRR+ I + Sbjct: 241 VKDFFVASGIPQDRIVTV-GHGERRHVASNDDIEERALNRRVVIRISKP 288 >gi|86136016|ref|ZP_01054595.1| OmpA family protein [Roseobacter sp. MED193] gi|85826890|gb|EAQ47086.1| OmpA family protein [Roseobacter sp. MED193] Length = 188 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 14/107 (13%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F L++ + I GHTD+ N RLS RA + Sbjct: 88 FFATDKHYISAAGKTRLKEFFNSNKGNVRSFVIAGHTDSR---ASDEYNIRLSQRRANAV 144 Query: 296 YQVLMKSGVSED---RISKISGFAHHRLKIASDPMN--SANRRIDIL 337 GV++ RI+ I + ++ + + + NRR++I Sbjct: 145 A------GVAKSVGARIADIRAYGERDPRVPNTSASNMAQNRRVEIY 185 >gi|84623210|ref|YP_450582.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367150|dbj|BAE68308.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 172 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD PE ++ + L I+++G+ D N L Sbjct: 63 RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 119 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337 R + L +G S +++ +S + R +++ S NRR++I+ Sbjct: 120 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 168 >gi|83854895|ref|ZP_00948425.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1] gi|83842738|gb|EAP81905.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1] Length = 632 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ T+ + +I E+L ++ ++G+TD+ N LS RA S Sbjct: 498 FEPGSATIDASTLGTMDQIAEILQDCRDIALEVQGYTDSQ---GREEMNLALSQSRAQSV 554 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L V G+ ++D NRRI+ + Sbjct: 555 LNELRARRVITGSFVA-KGYGEESPVASNDTEEGREANRRIEFKL 598 >gi|170696031|ref|ZP_02887168.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] gi|170139023|gb|EDT07214.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] Length = 646 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 11/107 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-----GHTDASPFRNIARDNWRLSLDR 291 F SS+ L + VL + G++D + N +LS +R Sbjct: 540 FGSSSARVPAAANEDLGQSARVLNACARNGRVAKLEVAGYSDNV---GGEQANLQLSKER 596 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 A + L+K+GV D + + G+ +D + NRRI+ Sbjct: 597 AEAVRSYLVKAGVPGDSL-RAQGYGQAHPIAGNDTASGRFANRRIEF 642 >gi|83954511|ref|ZP_00963222.1| OmpA family protein [Sulfitobacter sp. NAS-14.1] gi|83840795|gb|EAP79966.1| OmpA family protein [Sulfitobacter sp. NAS-14.1] Length = 234 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 4/103 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 +T F +S+ VL++ + E + GHTDA N L L Sbjct: 85 ESTVTFAFNSAQLDGAAQAVLRRQAGWIRQFPEVRFRVYGHTDAV---GSNSYNKALGLR 141 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 RA S L G+S R+ + F + I + ANRR Sbjct: 142 RAQSVVGFLSTQGISRSRLEAVVSFGETQPLIVTQGRERANRR 184 >gi|312131656|ref|YP_003998996.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132] gi|311908202|gb|ADQ18643.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132] Length = 418 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F++ S++ + + I E+L + I I G+TD + N +LS +RA + Sbjct: 315 FEQGSALIDASSQKEVDNIAEILKAYPDVNIKIGGYTDNT---GSDEINTKLSAERAANV 371 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 L+ G+ R+ G+ + +RRI + V + Sbjct: 372 LAALVDRGIEASRLES-EGYGPLHPIADNSTEEGREQDRRIAVRVTKK 418 >gi|90578362|ref|ZP_01234173.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components [Vibrio angustum S14] gi|90441448|gb|EAS66628.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components [Vibrio angustum S14] Length = 508 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 39/117 (33%), Gaps = 11/117 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + +F S P L E L+H + GHT R N LS Sbjct: 393 KTRPVIFSSGSERLTPNGQQQLNLTAESLSHYPNFRILVEGHT---GLRGDKALNIELSA 449 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI--ASDPMNS-ANR--RIDILVED 340 RA + L+ G RI + G I + + ANR R++I + Sbjct: 450 KRAKAVKSYLVNQLGFEASRIHAV-GKGSDEPLIQLSGESQRRYANRLMRVEIALMS 505 >gi|157962526|ref|YP_001502560.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC 700345] gi|157847526|gb|ABV88025.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345] Length = 324 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 7/119 (5%) Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281 I + + R +F SS + + + I LA IS+ +TD+ Sbjct: 206 PTINVQSVSIRGNSVFGFDSSKLTDTSALD-EVIKSALASKNASISVTAYTDSL---GAE 261 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 R N L+ RA + + GV+ RI I ++ + NRR++I + Sbjct: 262 RYNLALAKRRAEATQAYFITHGVAPSRIH-IDWKGEENPVSSNMTAKGRALNRRVEIEI 319 >gi|251793057|ref|YP_003007783.1| peptidoglycan-associated lipoprotein [Aggregatibacter aphrophilus NJ8700] gi|247534450|gb|ACS97696.1| peptidoglycan-associated lipoprotein [Aggregatibacter aphrophilus NJ8700] Length = 154 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 + + NT +F E + +L L + + + GHTD N Sbjct: 45 LQQRYNTVLFGFDKYDIQGEYVQILDAHAAYLNATPATSVRVEGHTDER---GTPEYNMA 101 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333 L RA++ L GV +IS +S + + + NRR Sbjct: 102 LGERRAHAVQNYLTSKGVQAGQISTVS-YGEEKPAELGHDEAAYSKNRR 149 >gi|37704604|gb|AAR01574.1| OprF [Pseudomonas sp. MFY32] Length = 316 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + GHT Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 269 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESARVQSV-GYGESRPVA 316 >gi|326794724|ref|YP_004312544.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] gi|326545488|gb|ADZ90708.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] Length = 304 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 39/113 (34%), Gaps = 8/113 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSL 289 R +F + + L + + + + I I GHTD RDN LS Sbjct: 183 RTAALFPTNGADLTDRIKHRLDLVALYVNNDPSIQYIYIDGHTDTI---GSRRDNRELSK 239 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA L++ GV D I +S NRR+ I +E Sbjct: 240 KRAEKITAYLLEQGVPADMIVS-RYHGERYPVASSRTNQGRERNRRVTIRLER 291 >gi|167625831|ref|YP_001676125.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167355853|gb|ABZ78466.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4] Length = 201 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 Q +F S P+ ++ I + ++ GH + N LS Sbjct: 73 QELKVLFANDSYYIDPQYYPQVEVIATFMRDYPNTQAVIEGHCSKT---GSHEHNQVLSQ 129 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 +RA + +L + G+ DR+S + G++ R + + NRR+ Sbjct: 130 NRANAVSSLLAERFGIDSDRLSAV-GYSFDRPVDPTHTRAAHKVNRRV 176 >gi|88811500|ref|ZP_01126755.1| hypothetical protein NB231_12214 [Nitrococcus mobilis Nb-231] gi|88791389|gb|EAR22501.1| hypothetical protein NB231_12214 [Nitrococcus mobilis Nb-231] Length = 435 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295 F S+ VL K+ L + + GHTD P R+ +DN+ LS RA +A Sbjct: 324 FRSGSAELSAAYAPVLDKVAGALKQVPGRVLVVGHTDDVPIRSLRFKDNYELSRQRALNA 383 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK---IASDPMNSANRRIDIL 337 + L + R+ G + + + + + NRRI+I+ Sbjct: 384 AERLKERLDDPGRV-SYLGVGPDQPRYRPVDTPENRARNRRIEII 427 >gi|126463896|ref|YP_001045009.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126105707|gb|ABN78237.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 254 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 65/211 (30%), Gaps = 6/211 (2%) Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 + + +T D E+ L P + + Sbjct: 44 RDAFAAARSGNGQARGLKLVTVDRIGPAPAVADVPDSLEAPAGEDPGLRPTASTDSAPGE 103 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + + L + + + G+L + F S++ + Sbjct: 104 TGRPVLGLPQGADRLAAADPLPERRETAEVSPESFGLLDPALQVNVRIHFSFDSAVLAAD 163 Query: 248 TIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 +L ++ V+ S I GHTDA N +LSL RA + L G++ Sbjct: 164 QTPLLAQLCTVMKASDIRLFQIVGHTDA---AGSEAYNQQLSLLRAEEVRRYLTGPCGIA 220 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDI 336 +R+ + G L DP + NRR++ Sbjct: 221 PERLRAV-GMGERFLADKKDPRSGENRRVEF 250 >gi|332188223|ref|ZP_08389951.1| peptidoglycan-associated lipoprotein [Sphingomonas sp. S17] gi|332011722|gb|EGI53799.1| peptidoglycan-associated lipoprotein [Sphingomonas sp. S17] Length = 174 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 8/106 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F PE+ +L L I+I GH D N L RA +A Sbjct: 72 FGLDQYDIDPESRAILDSQAGWLMRYPNVRITIEGHCDER---GTREYNLALGDRRANAA 128 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILV 338 L GVS DR+ + + R + + + NRR + +++ Sbjct: 129 KNYLAARGVSADRM-TVISYGKERPIALGSDEASYAQNRRAVTVVL 173 >gi|207725377|ref|YP_002255773.1| outer membrane protein [Ralstonia solanacearum MolK2] gi|207743944|ref|YP_002260336.1| outer membrane protein [Ralstonia solanacearum IPO1609] gi|300704759|ref|YP_003746362.1| outer membrane protein, ompa domain [Ralstonia solanacearum CFBP2957] gi|206590613|emb|CAQ37575.1| outer membrane protein [Ralstonia solanacearum MolK2] gi|206595346|emb|CAQ62273.1| outer membrane protein [Ralstonia solanacearum IPO1609] gi|299072423|emb|CBJ43768.1| putative outer membrane protein, ompA domain [Ralstonia solanacearum CFBP2957] Length = 218 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 15/120 (12%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD ++ PE L + L + T + I GHTD+ + N RLS+ RA Sbjct: 100 DALFDFDKAVLKPEGKAKLDDLVSKLKNITLEVVIAVGHTDSF---GSDKYNDRLSVRRA 156 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA---------NRRIDILVEDRQ 342 + L+ G+ +R+ G +LK+ + NRR+++ V + Sbjct: 157 EAVKGYLVSKGIEANRVYT-EGKGKRQLKVDPKSCKGARKAQIACQQPNRRVEVEVVGTR 215 >gi|197117521|ref|YP_002137948.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem] gi|197086881|gb|ACH38152.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem] Length = 450 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 67/275 (24%), Gaps = 10/275 (3%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 P + E + + K I T V Q L Sbjct: 182 RPQIAAATPMTNPAATEASTSLSTQTAKDQPVITHRETPKPVPASPAPATVATTPQSLAV 241 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + S + + + + Sbjct: 242 PVIATPGIASSASSVQPPPVAATVATTPQSLAVPVIVTPGIASSASSVQPPPVAAEIAKT 301 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +T + + T + ++ FD +S P I Sbjct: 302 APAPRENDSTEATDQAKQIELEAEKKPASTPSVPVAAPLLKATFE--FDCNSYKIRPSFI 359 Query: 250 VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSED 307 V +KIG + + ++I I GH D N LS RA Q LMK +S D Sbjct: 360 DVGRKIGLFMKRNPQIIAQIHGHAD---ITGSDDHNLALSEKRAVRTKQYLMKMYNLSAD 416 Query: 308 RISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 R +I + NRR +++ Sbjct: 417 RF-EIRTMGSSEPIADNTTEVGRKKNRRALVIILK 450 >gi|170717596|ref|YP_001783489.1| peptidoglycan-associated lipoprotein [Haemophilus somnus 2336] gi|168825725|gb|ACA31096.1| Peptidoglycan-associated lipoprotein [Haemophilus somnus 2336] Length = 151 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 47/136 (34%), Gaps = 7/136 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + L+ + + + + + + NT F+ S E +L L Sbjct: 15 AVLAACSSSDNASKTNAQMFGGYSVTDLQQRYNTVYFEFDSYDVQGEYAQILDAHSAYLK 74 Query: 261 HST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + + GH D N L L RA + L+ GV ++S +S + + Sbjct: 75 STPASKVLVEGHADER---GTPEYNMALGLRRADAVKNFLLNKGVQASQLSTLS-YGEEK 130 Query: 320 L--KIASDPMNSANRR 333 ++ S NRR Sbjct: 131 PAELGHNEAAYSKNRR 146 >gi|19881377|gb|AAM00931.1|AF491823_1 hemagglutinin antigen [Avibacterium paragallinarum] Length = 344 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 ++ + F + PE VL I +A + + G+TD Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 269 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330 N +LS RA + L+ GV+++ IS +G+ D + Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDTVKGRKA 325 Query: 331 -------NRRIDILVEDRQ 342 +RR++I V+ + Sbjct: 326 LIACLADDRRVEISVKGEE 344 >gi|33519799|ref|NP_878631.1| peptidoglycan-associated lipoprotein precursor [Candidatus Blochmannia floridanus] gi|33504144|emb|CAD83406.1| peptidoglycan-associated lipoprotein precursor [Candidatus Blochmannia floridanus] Length = 174 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 9/149 (6%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + D + L+ + +DN+ + + I + +NT F LP + Sbjct: 31 INDNKSNENMYLNFVPSDNLKDNDIPISKTNHIQN--LKLKNTIYFSLDQYCVLPIFFEI 88 Query: 252 LQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L + L + I I GHTD N L RAY+ + L GV ++I Sbjct: 89 LDLHADFLCNNPLYKIIIEGHTDER---GTPEYNIGLGERRAYAVKKYLQSKGVLSNQID 145 Query: 311 KISGFAHHRLKI--ASDPMNSANRRIDIL 337 +S + + ++ S NRR+ +L Sbjct: 146 TVS-YGKEKPIAFGQNEESYSKNRRVVLL 173 >gi|313203341|ref|YP_004041998.1| ompa/motb domain protein [Paludibacter propionicigenes WB4] gi|312442657|gb|ADQ79013.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4] Length = 662 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 51/166 (30%), Gaps = 34/166 (20%) Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 L +V+ F IS Q ++ P + LQ + ++L + Sbjct: 495 SLSTQGLVESKTFNVDFKLSAISKPIQIENIFYESGKWELTPASENGLQVLVKLLNDNPN 554 Query: 265 VI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI- 322 + I +TD DN LS RA S L+ ++ DR++ + G+ + + Sbjct: 555 ITIEISANTD---LVGSNADNKALSTKRAKSVVDYLISKKIAPDRLTSV-GYGEEKPVVV 610 Query: 323 ------------ASD----------PMNSA------NRRIDILVED 340 +D NRR + V Sbjct: 611 DAAMAKKYPFLKENDVLDEAYVLKLTPAQQEVANQINRRTEFRVLK 656 >gi|296387971|ref|ZP_06877446.1| putative outer membrane protein precursor [Pseudomonas aeruginosa PAb1] gi|313108871|ref|ZP_07794854.1| putative outer membrane protein precursor, OmpA family [Pseudomonas aeruginosa 39016] gi|310881356|gb|EFQ39950.1| putative outer membrane protein precursor, OmpA family [Pseudomonas aeruginosa 39016] Length = 321 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F + L I ++L + I GH+D N LS RA + Sbjct: 178 FPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L +GV E +I+ + + +A++ + NRR+ + + Sbjct: 235 VQEYLKSNGVPESQIN-VRFYGERYPLVANNSAANRARNRRVTVHLSR 281 >gi|152993346|ref|YP_001359067.1| peptidoglycan-associated lipoprotein [Sulfurovum sp. NBC37-1] gi|151425207|dbj|BAF72710.1| peptidoglycan-associated lipoprotein [Sulfurovum sp. NBC37-1] Length = 172 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 6/119 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD 283 + S D + F + A ++ I + G+ D Sbjct: 58 LGNSSADGFTSVYFTFDDYSISGAMQSKISADASRAAQTSGKIKVEGNCDEF---GTDEY 114 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVED 340 N+ L L RA + L GV R+ +S + +D + NRR+D+ + Sbjct: 115 NYALGLKRAKAVKDALRAEGVDTARMVMVS-YGESNPVCSSPTDSCYARNRRVDLRLAR 172 >gi|114776885|ref|ZP_01451928.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1] gi|114552971|gb|EAU55402.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1] Length = 200 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 24/197 (12%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 S + + + + L+ + + I+ + A + V Sbjct: 13 GPSEPESTAAPAGDQQLASENEQLGAEVAALRAELKQVNQDIADKKAQATASPKPERVAT 72 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDAS 275 R + +S F E+ L ++ + + I +RG+TD Sbjct: 73 PVDRLWVTVS---------FRSGYMELTRESRKALSRLAKKFLSKPREQSIEVRGYTDDE 123 Query: 276 PFRN----------IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 P + N LS RA + Q L+ + + D + + GF + Sbjct: 124 PIGGYPGHRHKPHHPYKTNMALSHARATNVAQALIDACIPNDSV-RALGFGASNYVADNA 182 Query: 326 PM--NSANRRIDILVED 340 NRR +I + Sbjct: 183 TAEGRQRNRRAEIHLVR 199 >gi|15598722|ref|NP_252216.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|218890247|ref|YP_002439111.1| putative outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|254242186|ref|ZP_04935508.1| hypothetical protein PA2G_02920 [Pseudomonas aeruginosa 2192] gi|9949675|gb|AAG06914.1|AE004773_3 probable outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|126195564|gb|EAZ59627.1| hypothetical protein PA2G_02920 [Pseudomonas aeruginosa 2192] gi|218770470|emb|CAW26235.1| probable outer membrane protein precursor [Pseudomonas aeruginosa LESB58] Length = 321 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F + L I ++L + I GH+D N LS RA + Sbjct: 178 FPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L +GV E +I+ + + +A++ + NRR+ + + Sbjct: 235 VQEYLKSNGVPESQIN-VRFYGERYPLVANNSAANRARNRRVTVHLSR 281 >gi|312132146|ref|YP_003999486.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132] gi|311908692|gb|ADQ19133.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132] Length = 805 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 11/114 (9%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 FD + L K+ ++ + + HTD+ + N LS +R Sbjct: 691 ENIYFDYGKYYIRRDAREGLDKLVSLMREYPNMKVELYSHTDSR---SSKEFNQTLSENR 747 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 A S + L K G+S RI GF ++L S+ + NRR +I V Sbjct: 748 AKSTAEYLFKRGISRSRIVDYKGFGENQLVNGCADGVKCSEAEHQLNRRTEIKV 801 >gi|78048827|ref|YP_365002.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294626855|ref|ZP_06705447.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665412|ref|ZP_06730700.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325929356|ref|ZP_08190486.1| peptidoglycan-associated lipoprotein [Xanthomonas perforans 91-118] gi|78037257|emb|CAJ25002.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292598869|gb|EFF43014.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292604823|gb|EFF48186.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325540268|gb|EGD11880.1| peptidoglycan-associated lipoprotein [Xanthomonas perforans 91-118] Length = 172 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD PE ++ + L I+++G+ D N L Sbjct: 63 RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 119 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337 R + L +G S +++ +S + R +++ S NRR++I+ Sbjct: 120 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 168 >gi|114776299|ref|ZP_01451344.1| OmpA family protein [Mariprofundus ferrooxydans PV-1] gi|114553129|gb|EAU55527.1| OmpA family protein [Mariprofundus ferrooxydans PV-1] Length = 167 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 7/108 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 N F SS L L +++E I+I G+ D N L R Sbjct: 62 NAVYFAFDSSALDASARATLDGYAAWLNANNSENITIEGNCDER---GSREYNLALGQRR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337 A S L +G++ RI +S F R + + NRR DI+ Sbjct: 119 ADSVRDYLTANGIAAGRIDTVS-FGEERPVCKGTGEACWAQNRRGDIV 165 >gi|91762267|ref|ZP_01264232.1| OmpA family protein [Candidatus Pelagibacter ubique HTCC1002] gi|91718069|gb|EAS84719.1| OmpA family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 180 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 7/105 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + F + ++ + L+K L ++++ + GH D N L Sbjct: 73 PDRVFFATNETVLTTASRETLRKQAAWLRKNSDINVVLEGHADER---GTREYNLALGER 129 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 RA SA LM G+S +RI + + R ++ S NRR Sbjct: 130 RANSAKDYLMTYGISSERI-SVLSYGKERPVDSGSNPLAWSKNRR 173 >gi|254564208|ref|YP_003071303.1| Outer membrane lipoprotein omp16 [Methylobacterium extorquens DM4] gi|254271486|emb|CAX27501.1| Outer membrane lipoprotein omp16 precursor [Methylobacterium extorquens DM4] Length = 170 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 + F+ S+ P L K L I GH D N+ L R Sbjct: 60 DRVFFESDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADER---GTREYNYSLGARR 116 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A + L G+S R+ +S + R +D S NRR Sbjct: 117 AQTVQDYLASRGISASRMRTVS-YGKERPVAVCNDISCWSQNRR 159 >gi|251792331|ref|YP_003007056.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700] gi|247533723|gb|ACS96969.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700] Length = 346 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 16/118 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P+ VL I +A I + G+TD N +LS RA + Sbjct: 233 FAFGKANLKPQAQSVLDGIYSEIAQVNNADIKVSGYTDRI---GSDAYNQKLSQRRAETV 289 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILVEDRQ 342 L+ GV+++ IS G+ + D + +RR++I V + Sbjct: 290 ANYLVSKGVAQNAISAA-GYGKANPVTGTKCDAVKGRKALIACLADDRRVEIAVNGSK 346 >gi|113970709|ref|YP_734502.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4] gi|113885393|gb|ABI39445.1| OmpA/MotB domain protein [Shewanella sp. MR-4] Length = 290 Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +D+ + + L +I E L++ +V + + +TD+ N ++S RA S Sbjct: 184 YDEGGTDLTRFSQQQLSRIQEYLSYDPDVELVLVDAYTDSY---GGRSVNQKVSDKRAES 240 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + SG+ +DRI + G R +++ + NRR+ I + Sbjct: 241 VKDFFVASGIPQDRIVTV-GHGERRHVASNEDIEERALNRRVVIRISKP 288 >gi|254181081|ref|ZP_04887679.1| ompA family protein [Burkholderia pseudomallei 1655] gi|254195586|ref|ZP_04902013.1| ompA family protein [Burkholderia pseudomallei S13] gi|169652332|gb|EDS85025.1| ompA family protein [Burkholderia pseudomallei S13] gi|184211620|gb|EDU08663.1| ompA family protein [Burkholderia pseudomallei 1655] Length = 188 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ P L ++ + + + G+TD + N RLSL RA + Sbjct: 65 LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 121 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +++ G + N RR+++ V Q Sbjct: 122 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 178 >gi|116051525|ref|YP_789639.1| OmpA family membrane protein [Pseudomonas aeruginosa UCBPP-PA14] gi|115586746|gb|ABJ12761.1| putative outer membrane protein precursor, OmpA family [Pseudomonas aeruginosa UCBPP-PA14] Length = 321 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F + L I ++L + I GH+D N LS RA + Sbjct: 178 FPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L +GV E +I+ + + +A++ + NRR+ + + Sbjct: 235 VQEYLKSNGVPESQIN-VRFYGERYPLVANNSAANRARNRRVTVHLSR 281 >gi|254208912|ref|ZP_04915260.1| OmpA family protein [Burkholderia mallei JHU] gi|147750788|gb|EDK57857.1| OmpA family protein [Burkholderia mallei JHU] Length = 193 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ P L ++ + + + G+TD + N RLSL RA + Sbjct: 70 LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 126 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +++ G + N RR+++ V Q Sbjct: 127 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 183 >gi|302037323|ref|YP_003797645.1| hypothetical protein NIDE1997 [Candidatus Nitrospira defluvii] gi|300605387|emb|CBK41720.1| conserved exported protein of unknown function, putative Outer membrane protein OmpA [Candidatus Nitrospira defluvii] Length = 325 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 8/140 (5%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + + +V V + I + FD + + P++ LQ++ +L Sbjct: 188 VAKPMETNKLVGFVGAQDMADQISSNGRVSLYGLYFDTNKAELRPDSEPTLQEMATLLKG 247 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHR 319 + + + GHTD +N LS RA++ L K G+++ R++ + G + Sbjct: 248 RPQLKLLVVGHTDNI---GSYEENGILSQRRAHAVINALASKHGIAKARLTPV-GDSFSA 303 Query: 320 LKIASDPM--NSANRRIDIL 337 ++ + NRR++++ Sbjct: 304 PIASNKTEEGRAKNRRVELV 323 >gi|262066274|ref|ZP_06025886.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC 33693] gi|291380021|gb|EFE87539.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC 33693] Length = 75 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 5/76 (6%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + GHTD+ + N LS RA + L++ G++E+RI I ++ Sbjct: 3 LEGHTDSI---GSNQYNIGLSRRRAEAVKAKLIEFGLAEERIVGIEAKGEEYPVATNETP 59 Query: 328 NSA--NRRIDILVEDR 341 NRR++ + R Sbjct: 60 EGRLQNRRVEFRLVQR 75 >gi|90412130|ref|ZP_01220136.1| putative peptidoglycan-associated lipoprotein [Photobacterium profundum 3TCK] gi|90326854|gb|EAS43239.1| putative peptidoglycan-associated lipoprotein [Photobacterium profundum 3TCK] Length = 174 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q T F ++ + +L+ E L++S++ + + GH D N L Sbjct: 68 QEQTVYFKFDTAEIQADYQAMLEAHAEYLSNSSDVKVIVEGHADER---GTPEYNIALGE 124 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + Q L GVS +IS +S + + + + NRR ++ Sbjct: 125 RRANAVAQYLQALGVSASQISIVS-YGEEKPLVLGHTDADYAKNRRAVLV 173 >gi|89900877|ref|YP_523348.1| OmpA/MotB [Rhodoferax ferrireducens T118] gi|89345614|gb|ABD69817.1| OmpA/MotB [Rhodoferax ferrireducens T118] Length = 177 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWR 286 I+ FD S + PE +++ L + ++I GHTD N Sbjct: 67 IVGGPRVVYFDYDSYVIKPEFQSLIEVHARYLKADKSRKVAIEGHTDER---GGREYNLA 123 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 L RA + L GV + ++ +S F + + + + + NRR +I Sbjct: 124 LGQKRAEAVRSALGLLGVVDSQVEAVS-FGKEKPAVQGSDEAAMAKNRRAEI 174 >gi|296238955|gb|ADH01478.1| OmpA family protein [Pseudomonas sp. 2663] Length = 535 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 12/118 (10%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290 R+ FD + + ++++G A + + GHTD P R +N LS Sbjct: 377 RSDGAFDVGKAQVRTDFERNIERLGAAFAPWPGDLEVIGHTDRQPIRTSEFGNNQALSEA 436 Query: 291 RAYSAYQVLMKSGVSE---------DRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + L ++ + R SG + ++ + NRR+D+L Sbjct: 437 RARTVADELRRTALPGGAQAPGNAVQRNIGFSGRGDTQPIDSAQTPAAYERNRRVDVL 494 >gi|300023927|ref|YP_003756538.1| peptidoglycan-associated lipoprotein [Hyphomicrobium denitrificans ATCC 51888] gi|299525748|gb|ADJ24217.1| peptidoglycan-associated lipoprotein [Hyphomicrobium denitrificans ATCC 51888] Length = 171 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F S PE L K + L ++ I+I GH D N L R Sbjct: 58 DIVYFSTDSIDLTPEAQQTLSKQAQWLQQYSQYAITIEGHADER---GTREYNIALGARR 114 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A + L + G++ RI IS + R +D S NRR Sbjct: 115 ATTVRNFLSQHGINGARIRTIS-YGKERPVAVCNDISCWSQNRR 157 >gi|83720431|ref|YP_442168.1| OmpA family protein [Burkholderia thailandensis E264] gi|83654256|gb|ABC38319.1| OmpA family protein [Burkholderia thailandensis E264] Length = 224 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD +I P L ++ + + + G+TD + N RLSL RA + Sbjct: 101 LFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 157 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +++ G + N RR+++ V Q Sbjct: 158 VKSYLVSKGVPANKVYT-EGKGKRNPITGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 214 >gi|53720132|ref|YP_109118.1| outer membrane protein a precursor [Burkholderia pseudomallei K96243] gi|53724795|ref|YP_102249.1| OmpA family protein [Burkholderia mallei ATCC 23344] gi|76811968|ref|YP_334381.1| outer membrane protein a [Burkholderia pseudomallei 1710b] gi|126442031|ref|YP_001059910.1| ompA family protein [Burkholderia pseudomallei 668] gi|126452054|ref|YP_001067198.1| ompA family protein [Burkholderia pseudomallei 1106a] gi|167825270|ref|ZP_02456741.1| ompA family protein [Burkholderia pseudomallei 9] gi|167919986|ref|ZP_02507077.1| ompA family protein [Burkholderia pseudomallei BCC215] gi|226197831|ref|ZP_03793405.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9] gi|237813303|ref|YP_002897754.1| OmpA family protein [Burkholderia pseudomallei MSHR346] gi|238561689|ref|ZP_00441673.2| OmpA family protein [Burkholderia mallei GB8 horse 4] gi|242317986|ref|ZP_04817002.1| OmpA family protein [Burkholderia pseudomallei 1106b] gi|251766980|ref|ZP_02265557.2| OmpA family protein [Burkholderia mallei PRL-20] gi|254177032|ref|ZP_04883689.1| OmpA family protein [Burkholderia mallei ATCC 10399] gi|254258959|ref|ZP_04950013.1| ompA family protein [Burkholderia pseudomallei 1710a] gi|254360032|ref|ZP_04976302.1| OmpA family protein [Burkholderia mallei 2002721280] gi|262193316|ref|YP_001079767.2| OmpA family protein [Burkholderia mallei NCTC 10247] gi|52210546|emb|CAH36529.1| outer membrane protein a precursor [Burkholderia pseudomallei K96243] gi|52428218|gb|AAU48811.1| OmpA family protein [Burkholderia mallei ATCC 23344] gi|76581421|gb|ABA50896.1| outer membrane protein a precursor [Burkholderia pseudomallei 1710b] gi|126221524|gb|ABN85030.1| outer membrane protein A [Burkholderia pseudomallei 668] gi|126225696|gb|ABN89236.1| OmpA family protein [Burkholderia pseudomallei 1106a] gi|148029272|gb|EDK87177.1| OmpA family protein [Burkholderia mallei 2002721280] gi|160698073|gb|EDP88043.1| OmpA family protein [Burkholderia mallei ATCC 10399] gi|224812455|gb|ACN64870.1| OmpA family protein [Burkholderia pseudomallei] gi|225930019|gb|EEH26032.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9] gi|237505834|gb|ACQ98152.1| OmpA family protein [Burkholderia pseudomallei MSHR346] gi|238524141|gb|EEP87576.1| OmpA family protein [Burkholderia mallei GB8 horse 4] gi|242141225|gb|EES27627.1| OmpA family protein [Burkholderia pseudomallei 1106b] gi|243064216|gb|EES46402.1| OmpA family protein [Burkholderia mallei PRL-20] gi|254217648|gb|EET07032.1| ompA family protein [Burkholderia pseudomallei 1710a] gi|261826008|gb|ABN03326.2| OmpA family protein [Burkholderia mallei NCTC 10229] gi|261835034|gb|ABO04145.2| OmpA family protein [Burkholderia mallei NCTC 10247] Length = 224 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ P L ++ + + + G+TD + N RLSL RA + Sbjct: 101 LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 157 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +++ G + N RR+++ V Q Sbjct: 158 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 214 >gi|156976199|ref|YP_001447105.1| hypothetical protein VIBHAR_04970 [Vibrio harveyi ATCC BAA-1116] gi|156527793|gb|ABU72878.1| hypothetical protein VIBHAR_04970 [Vibrio harveyi ATCC BAA-1116] Length = 350 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F L + ++ I + GHTD N +S RA Sbjct: 212 FQFGQKTLSRSQQSTLAALYSYISVDDRVTKILVDGHTDNV---GSQLANLNVSRQRAEQ 268 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 + L++ GV + ++ +++ + NRR+ + + Sbjct: 269 VAEALIQQGVDRS-LIEVRAHGSRYPIASNNTQAGQAKNRRVTLRLVRDN 317 >gi|124386037|ref|YP_001026945.1| OmpA family protein [Burkholderia mallei NCTC 10229] gi|217420891|ref|ZP_03452396.1| outer membrane protein A [Burkholderia pseudomallei 576] gi|217396303|gb|EEC36320.1| outer membrane protein A [Burkholderia pseudomallei 576] Length = 179 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ P L ++ + + + G+TD + N RLSL RA + Sbjct: 56 LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 112 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +++ G + N RR+++ V Q Sbjct: 113 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 169 >gi|124004962|ref|ZP_01689805.1| OmpA family protein [Microscilla marina ATCC 23134] gi|123989640|gb|EAY29186.1| OmpA family protein [Microscilla marina ATCC 23134] Length = 645 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + + +P+ L K+ +LA + + I GHTD+ + N +LS +RA + Sbjct: 539 FKEGKADVIPDMEADLDKLVILLADHPKLGLKISGHTDS---SGDSDANLKLSQNRADAI 595 Query: 296 YQVLMKSG-VSEDRISKISGFAHHRLKIASD-PMNSA--NRRIDILV 338 + ++ G R++ I G+ I S+ NRR++ + Sbjct: 596 KKYIVDKGKFDPKRVTAI-GYGDTVPIIKSEKTDEDKKINRRVEFEI 641 >gi|114763456|ref|ZP_01442863.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601] gi|114543994|gb|EAU47005.1| OmpA domain protein [Roseovarius sp. HTCC2601] Length = 637 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 85/304 (27%), Gaps = 17/304 (5%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + + + TD + + + + + + + E + Sbjct: 309 IALLALEGTDQGLFDRVVGELETGLPEVFALKAVLPETPDAKDEGPREFTATLSPEGSVQ 368 Query: 109 NSVDLKIGSTNQKKQY-------QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161 ++ Q + + + L G Sbjct: 369 LRGRVRSEIARQTADSLARALFTSASVYTAARVDETLPANWSPRVLAGLEALGGLSNGVV 428 Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + + P ++++I + K + +IS T + + E Sbjct: 429 RVTPDLVSLSGNTGNPDAEDEISGLLADKLGEAGEFEISVTYQEKLDPTLGIPTPEECEA 488 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNI 280 + I + N F+ S+ V+ I E+L + + I+GHTD+ Sbjct: 489 QIVEIIGDRKIN---FEPGSANLDASAKDVMDDIAELLKLCGDIPLEIQGHTDSQ---GR 542 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 N +LS DRA + L V ++ G+ + + NRRI + Sbjct: 543 ESMNEQLSQDRAQAVLDALRNRRVLTAS-YRVKGYGEMQPIADNGTEEGREANRRIAFRL 601 Query: 339 EDRQ 342 + Sbjct: 602 IRPE 605 >gi|37704650|gb|AAR01597.1| OprF [Pseudomonas sp. MFY138] Length = 314 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + GHT Sbjct: 208 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMTQYPSTTTTVEGHT 267 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 268 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 314 >gi|152982349|ref|YP_001354513.1| hypothetical protein mma_2823 [Janthinobacterium sp. Marseille] gi|151282426|gb|ABR90836.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 1376 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 44/142 (30%), Gaps = 11/142 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + + + S+ + + +F + P L + + Sbjct: 62 RAEAIEMRNRAAQVPAAQADMSKSLQEAKGLSLFVSGKADLTPSAKESLDALVAEIHARK 121 Query: 264 E-----VISIRGHTDASPFRNIAR----DNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 I++ GHTD A+ DN LS RA + L ++ + I G Sbjct: 122 GVIAGMRIAVVGHTDNQGLSPNAKRIFTDNQGLSEARALTVAAYLKQALNNPAITYSIDG 181 Query: 315 FAHHRLKIASDPMNS--ANRRI 334 + ++ NRR+ Sbjct: 182 KGESQPLASNATPEGMSRNRRV 203 >gi|37704628|gb|AAR01586.1| OprF [Pseudomonas sp. MFY72] Length = 322 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272 V + + ++ + FD S + ++ + + + ++ GHT Sbjct: 216 NVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTVEGHT 275 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + VL+ + GV R++ + G+ R Sbjct: 276 DSV---GTDAYNQKLSERRANAVRDVLVNEYGVEGGRVNAV-GYGESRPVA 322 >gi|315179667|gb|ADT86581.1| OmpA family protein [Vibrio furnissii NCTC 11218] Length = 344 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 42/121 (34%), Gaps = 9/121 (7%) Query: 226 ISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIAR 282 I+ + R+T + F L+ + + + I GHTD Sbjct: 210 ITFAEARDTSLYFASGQQSLSGAQQHTLRDLISYVVRDKRATHLLIDGHTDNV---GSRL 266 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 N +S RA VL GV+ D+I +I ++ + NRR+ I + Sbjct: 267 ANLSVSRSRAEQVAAVLETLGVAADKI-QIRAHGSRYPVASNATESGRAQNRRVVIRLVR 325 Query: 341 R 341 Sbjct: 326 D 326 >gi|296533201|ref|ZP_06895824.1| type VI secretion system OmpA/MotB family protein [Roseomonas cervicalis ATCC 49957] gi|296266471|gb|EFH12473.1| type VI secretion system OmpA/MotB family protein [Roseomonas cervicalis ATCC 49957] Length = 162 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 12/153 (7%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 LA ++ L+ +A + V + RT + I + M+ S+ + +L + Sbjct: 15 LAARLREFLAPEIAQGL-VTVTGDVQRTMVRIQ-----GSGMYASGSATLNERFVPLLTR 68 Query: 255 IGEVLAHST-EVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311 IGE + I GH+D P R N+ LS RA +A +V+ ++ G+ R Sbjct: 69 IGEAVREEDAGRTDILGHSDNQPIRTLRFPSNFHLSQARAEAALEVIRRASGLEAARFQA 128 Query: 312 ISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 G + NRRI+++V +R+ Sbjct: 129 -EGRGDAEPVADNRTAEGREANRRIEVVVLNRR 160 >gi|262376326|ref|ZP_06069556.1| predicted protein [Acinetobacter lwoffii SH145] gi|262308927|gb|EEY90060.1| predicted protein [Acinetobacter lwoffii SH145] Length = 492 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 95/309 (30%), Gaps = 20/309 (6%) Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 + + FLV + D + AS + N S Q +++ Sbjct: 180 LILAGLILFLVRSCMQD-DVEDSNTQATSE---VAAAQPASLRLSTGSNGEIVSCQLQLN 235 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 I +N + + ++ + + + Sbjct: 236 NPQYMEILQNEIKQIFNYNIGCGALSSEVYHSEFIDQDTIPTVLRTMQGMPNVSLDWIGN 295 Query: 160 STDLEKSINKEENYFLPP---LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + + N E L+K + ++ D+ +S +A V Sbjct: 296 QVSVRAATNAEAERLAAQIRSLAKNVTVVTQQPLNRSDVINTANSEAEQALASIKTDNVK 355 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDAS 275 T + + II+ FD +S+ +VL + +L + VI + GH DA Sbjct: 356 ALDVATALNLQIIN------FDTASTEVPEVNKLVLDQAAALLQRAPHVILKVTGHADAQ 409 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333 +N LS+ RA + L+ GV+ ++ + G + + NRR Sbjct: 410 ---GSEAENKVLSVQRAQAITSYLVGKGVNPAQLQAV-GMGEDQPVEPNATPAGQFQNRR 465 Query: 334 IDILVEDRQ 342 + V + + Sbjct: 466 VTFEVVNTE 474 >gi|261414609|ref|YP_003248292.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371065|gb|ACX73810.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327079|gb|ADL26280.1| putative peptidoglycan-associated lipoprotein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 192 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 63/198 (31%), Gaps = 31/198 (15%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 E + + + + LA +RL+ ++ ++ Sbjct: 23 KEKPETDPQPQTAPEAPADSTLNLDALVADTLDADSLARLEAERLEAERARLEELIN--- 79 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVI 266 I + D FD S +L ++ E+L + ++ Sbjct: 80 -----------------RIMLED----VYFDYDRSELTENAKRLLAQVAEILVNENRFIV 118 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--AS 324 ++ GHTDA N L R+ + L+ GV +R+ +S + R K+ Sbjct: 119 TVEGHTDAR---GTEDYNISLGARRSTVVREFLIAYGVDANRLVSVS-YGKERPKVQGTD 174 Query: 325 DPMNSANRRIDILVEDRQ 342 + S NRR V Q Sbjct: 175 ETAYSKNRRAHFRVSIDQ 192 >gi|307822249|ref|ZP_07652481.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] gi|307736815|gb|EFO07660.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96] Length = 100 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 6/86 (6%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + I GHTD + LS RAY+ + L G+S DRI + G+A Sbjct: 14 KRQPDKVLIEGHTDNV---GSNSTHQGLSDRRAYAVWTALNDMGISSDRI-RTRGYADAY 69 Query: 320 LKIASDPMNSA--NRRIDILVEDRQG 343 +D NRR++I++ D G Sbjct: 70 PVAGNDTTAGRQLNRRVEIILSDANG 95 >gi|58581292|ref|YP_200308.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425886|gb|AAW74923.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae KACC10331] Length = 181 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD PE ++ + L I+++G+ D N L Sbjct: 72 RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 128 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337 R + L +G S +++ +S + R +++ S NRR++I+ Sbjct: 129 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 177 >gi|328470357|gb|EGF41268.1| hypothetical protein VP10329_06152 [Vibrio parahaemolyticus 10329] Length = 225 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 72/192 (37%), Gaps = 12/192 (6%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 G L + + E + + + R + ++L + + + Sbjct: 43 GNMLDTAPKTNTELRHPEWGYASASHVSTAPRVNQMARAAEKKSNNVTSLEMFLDRHNIP 102 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272 ++I + +Q + F S+ + L+K+G LA T+V + GH Sbjct: 103 HETIG--GGHLMIRLKEQVH---FQTGSAQLSSNSQDWLRKLGHYLAGRTDVDVVIDGHA 157 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330 D++ A N LS RA + ++ S + R+ GF + + ++ + Sbjct: 158 DST---GAASFNDTLSEKRAREVEKQMLASSIPRQRVFS-RGFGEYVPQCSNATSSGKAC 213 Query: 331 NRRIDILVEDRQ 342 NRR+++++ + Sbjct: 214 NRRVELMLIVDE 225 >gi|254522020|ref|ZP_05134075.1| OmpA/MotB domain protein [Stenotrophomonas sp. SKA14] gi|219719611|gb|EED38136.1| OmpA/MotB domain protein [Stenotrophomonas sp. SKA14] Length = 513 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + LP + + L ++ ++L +SI GHTD N LS DRA S Sbjct: 412 FATDKAQILPASELQLAQVLQLLQGDPALKLSIEGHTDD---SGAVAHNRSLSEDRARSV 468 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L G++ DR+ GF + + + NRR++++ Sbjct: 469 VAALTAKGIAADRLQAA-GFGADKPVADNGSEEGKARNRRVELV 511 >gi|332663816|ref|YP_004446604.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332332630|gb|AEE49731.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 406 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 18/207 (8%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 Q ++ +++ + + K PP+ E K ++ D Sbjct: 214 EQPEVVSTPTVKPPTQRIDTPKTNNGGRPTPGKTPPVNNPPVVAENNTTTKNPEKKPDTN 273 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 ++ + K T + I + F + +I + L K+ Sbjct: 274 STPPKSIDNPDFSTLKK--SDLTMGQTLRIP------SITFAVNDTILSRASYPNLDKLL 325 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + + ++ + GHT+ N RLSL RA + L+K GV +R ++ G+ Sbjct: 326 TFMNTNPAIVLEVGGHTNGLCA--DDYCN-RLSLRRARAVVDYLVKKGVKPERF-QVKGY 381 Query: 316 AHHRLK--IASDPMNSANRRIDILVED 340 + + +DP N+R++I + D Sbjct: 382 GKTQPISTVKNDP---KNQRVEIKILD 405 >gi|284038953|ref|YP_003388883.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283818246|gb|ADB40084.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 285 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 9/168 (5%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + ++ + + +L I + S L + + + F Sbjct: 122 AGVPEDQVQIQGQASELLNFIKDSTSALSFSFQAITINADWLARHQKYIDLFHPLQLYFP 181 Query: 239 KSSSI--PLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 S+ P+ +++ L H TE ++I GHTD++ N +LS RA Sbjct: 182 TGSTEHIVTPDNEQFVREAITYLYNHPTERLTITGHTDST---GTEAFNLKLSRLRAMVV 238 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 L+K G + R ++ + ++ NRR+ +LV+ R Sbjct: 239 RDKLIKQG-ASKRWIQVIAMGNKLPIAPNNLPEGREANRRVTLLVKKR 285 >gi|94267383|ref|ZP_01290861.1| OmpA/MotB [delta proteobacterium MLMS-1] gi|93452026|gb|EAT02724.1| OmpA/MotB [delta proteobacterium MLMS-1] Length = 388 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 75/286 (26%), Gaps = 20/286 (6%) Query: 61 TKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQ 120 T + +YF P G+ V+ G+T Sbjct: 90 TWQVGLRYFGPRFVPADPDKSGLLAPSTRSALFYGMAPHSREGIQQGLEQVNRPAGTTPL 149 Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + ++ L + + + + E + Sbjct: 150 AVALRDGGEDLAALDGDSALVVFTDGEADSAAEVLAAADALRDEFGATLCIYPVMVGDDP 209 Query: 181 EKILAMKR------------KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + +++ +L + + K V + Sbjct: 210 AGLELLEQVVARVDCGFVSQADQLFSGRAMAAFAEKAFLQKVEDKPVAEAVKEKKEPVHR 269 Query: 229 IDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNW 285 + R F+ + P L + + L E I I GHT A N Sbjct: 270 TEARRLEVNFEFDQARIRPADQAALGRFAQFLKKYPELEEIEIAGHTCNM---GPAEYNR 326 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA 330 +LS RA + + L++ G++ +R+ G+ + ++D + Sbjct: 327 QLSQRRAANVVKFLVEKEGIASERLLA-KGYGSDKPIASNDTVAGR 371 >gi|19881365|gb|AAM00925.1|AF491817_1 hemagglutinin antigen [Avibacterium paragallinarum] Length = 344 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 ++ + F + PE VL I +A + + G+TD Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 269 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330 N +LS RA + L+ GV+++ IS +G+ D + Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDTVKGRKA 325 Query: 331 -------NRRIDILVEDRQ 342 +RR++I V+ + Sbjct: 326 LIACLADDRRVEISVKGEE 344 >gi|58200723|gb|AAW66611.1| hemagglutinin antigen [Avibacterium paragallinarum] Length = 344 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 ++ + F + PE VL I +A + + G+TD Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 269 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330 N +LS RA + L+ GV+++ IS +G+ D + Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDTVKGRKA 325 Query: 331 -------NRRIDILVEDRQ 342 +RR++I V+ + Sbjct: 326 LIACLADDRRVEISVKGEE 344 >gi|330807377|ref|YP_004351839.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375485|gb|AEA66835.1| Putative lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 167 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 +F P + ++++IG+ L + + + GHTDA N +LS+ R Sbjct: 60 GKVLFGSDVENLNPASTEIVERIGKALLGAGIQRVRVDGHTDA---SGSQAYNEQLSMRR 116 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 A S +VL G+ E+ + ++ G + ++D + NRR+ I+V Sbjct: 117 AASVSKVLTAVGMREENV-QLRGLGSSKPVASNDTASGRTENRRVAIVVIAD 167 >gi|325926546|ref|ZP_08187862.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas perforans 91-118] gi|325543054|gb|EGD14501.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas perforans 91-118] Length = 400 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 75/278 (26%), Gaps = 20/278 (7%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 K + + I+ + + +D++ L + Sbjct: 131 LKADGSGTANFEGGLVNVNADGSGTINAIGEGGSGGSLIDVQSDGGGTYNGPAGLISLDG 190 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK--- 189 + + SE R G + + + + P + Sbjct: 191 KGAGTWNSEKSGLVDNRGDGSGTWNGPRGLVTINADGSGTWNGPDGLVQNHGDGTGTVGT 250 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + + K + I++ D+ +FD S P+ Sbjct: 251 PPREVRMPPLPKVPPAGRFPPLQKFAPPGAPCGYL-ITLNDR---ILFDFDKSDIRPDAA 306 Query: 250 VVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 VL + + + +RGHTDA + N LS RA + + Sbjct: 307 RVLDTLGAAQTKVTAKDMQVRGHTDA---KGSDDYNQALSERRANAVLA--ALRARGAAQ 361 Query: 309 ISKISGFAHHRLKIAS------DP-MNSANRRIDILVE 339 + G+ + + +P NRR++I + Sbjct: 362 SANAKGYGESQPVAPNTLNGQDNPGGRQLNRRVEIFLR 399 >gi|322420089|ref|YP_004199312.1| hypothetical protein GM18_2585 [Geobacter sp. M18] gi|320126476|gb|ADW14036.1| conserved repeat domain protein [Geobacter sp. M18] Length = 1890 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 8/106 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 F S+ E +L VL I GHTD N LS R Sbjct: 1618 GAFIFDKSVLTTEAKRLLSGAARVLRERPRERVILEGHTDGI---GTVEYNMALSKRRCD 1674 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 +A + L++ GV+ R+ + + R + + NRR+++ Sbjct: 1675 AAAEYLIRVEGVAPSRLLR-RWYGKSRPVADNVTTSGRRLNRRVEL 1719 >gi|19881369|gb|AAM00927.1|AF491819_1 hemagglutinin antigen [Avibacterium paragallinarum] Length = 344 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 ++ + F + PE VL I +A + + G+TD Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 269 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330 N +LS RA + L+ GV+++ IS +G+ D + Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDTVKGRKA 325 Query: 331 -------NRRIDILVEDRQ 342 +RR++I V+ + Sbjct: 326 LIACLADDRRVEISVKGEE 344 >gi|307727324|ref|YP_003910537.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003] gi|307587849|gb|ADN61246.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003] Length = 230 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 7/128 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 LS L + + + G+ I+I + +F+ + L E+ VL +I VL Sbjct: 91 QLLSLLAPLQDNRQITIAHSPQGVEIAINAK---VLFNSGDARLLQESYGVLNQIATVLR 147 Query: 261 HS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 I + GHTD+ P NW LS RA + + G+ R++ I G A + Sbjct: 148 DRAKNNILVEGHTDSLPIATAKYESNWELSSARAGAVVRFFADKGIQAHRMAAI-GRADN 206 Query: 319 RL-KIASD 325 I +D Sbjct: 207 FPLIIGND 214 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 19/55 (34%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 + D W I YAD +T LM FL ++++ + + Sbjct: 16 RHHDGHDNGEQSDRWLISYADLITTLMVLFLALYVLQLAKNSELQIKTLQHRAVK 70 >gi|167589365|ref|ZP_02381753.1| OmpA family domain protein [Burkholderia ubonensis Bu] Length = 333 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + PE+ L ++ ++L + + I GHTD N LS RA + Sbjct: 231 FDTDKAQVKPESKPQLDEMAKLLTGNPALKVYIVGHTDNQ---GAFARNADLSQKRAEAV 287 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 Q L ++ R+ G A ++ D + NRR++++ Sbjct: 288 AQALASTYRIAPARLVA-KGVASLSPVASNGDDAGRAQNRRVELV 331 >gi|91975492|ref|YP_568151.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] gi|91681948|gb|ABE38250.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] Length = 217 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 17/188 (9%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 + ++ ++ +++ S A + L + + + Sbjct: 33 NPNAAQAGEVSAQQIRDQLKGAKTRSLSGARAAVSPEELATVKRISQIRSLSAGDREQMA 92 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRG 270 + + + I+ FD +S+ P L+ +G+ L S ++ + G Sbjct: 93 AIAAKRPAIDLEIN---------FDYNSAALTPRAEPQLKSLGDALISSDLKDSIVMLAG 143 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS 329 HTDA + N LS RA S + L+ + D + + G+ +LK SDP+ + Sbjct: 144 HTDA---KGGDDYNQTLSERRAESVKRYLIDRYSIRPDHLVAV-GYGKKQLKDPSDPLGA 199 Query: 330 ANRRIDIL 337 NRR+ I+ Sbjct: 200 ENRRVQIV 207 >gi|262197467|ref|YP_003268676.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262080814|gb|ACY16783.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 540 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 63/213 (29%), Gaps = 20/213 (9%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 + ++R+ E+ + S + + + + I Sbjct: 329 QPLVSREQEEINRILFSRRADPDDDGLIGETDECPEESGPPENRGCPDTDADGDTIVDRE 388 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + I + F + L ++ VL+ + +VL Sbjct: 389 DNCPTLPTDGRGKAGCPVAYVEGDQIIILDKVHFATDEDVILDDSKPVLEAVAQVLRTRP 448 Query: 264 E--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 + + I GHTD R N LS R S Q L+ SGV +R+ G+ H R Sbjct: 449 DIERVRIEGHTD---VRASDAYNLDLSQRRVNSVMQFLIDSGVGAERLEA-KGWGHTRPI 504 Query: 322 IASD----PMNSA----------NRRIDILVED 340 I P NRR++ + Sbjct: 505 IDDAHCDRPDEQLDAECTRLTSMNRRVEFHIRR 537 >gi|157960903|ref|YP_001500937.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC 700345] gi|157845903|gb|ABV86402.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345] Length = 365 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ + ++++ E ++ ++I GH + A N LS RA + Sbjct: 254 FATNSATVQESSYGDIKELAEYMSQHPNAEVTISGHASNT---GKADYNMALSERRAAAV 310 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 ++L+ + GV+ ++S G+ + I + ANRRI+ V + Sbjct: 311 AEILINEYGVASSKVSS-KGYGITQPLIEGSSAEANEANRRIEAHVTGTE 359 >gi|83749098|ref|ZP_00946103.1| Outer membrane protein [Ralstonia solanacearum UW551] gi|83724219|gb|EAP71392.1| Outer membrane protein [Ralstonia solanacearum UW551] Length = 218 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 15/120 (12%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD + ++ PE L + L + T + I GHTD+ + N RLS+ RA Sbjct: 100 DALFDFNKAVLKPEGKAKLDDLVSKLKNITLKVVIAVGHTDSF---GSDKYNDRLSVRRA 156 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA---------NRRIDILVEDRQ 342 + L+ G+ +R+ G +LK+ + NRR+++ V + Sbjct: 157 EAVKGYLVSKGIEANRVYT-EGKGKRQLKVDPKSCKGARKAQIACQQPNRRVEVEVVGTR 215 >gi|254236451|ref|ZP_04929774.1| hypothetical protein PACG_02437 [Pseudomonas aeruginosa C3719] gi|126168382|gb|EAZ53893.1| hypothetical protein PACG_02437 [Pseudomonas aeruginosa C3719] Length = 322 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F + L I ++L + I GH+D N LS RA + Sbjct: 179 FPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDN---SGNRLTNRDLSRRRALA 235 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L +GV E +I+ + + +A++ + NRR+ + + Sbjct: 236 VQEYLKSNGVPESQIN-VRFYGERYPLVANNSAANRARNRRVTVHLSR 282 >gi|71892117|ref|YP_277849.1| Pal [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796223|gb|AAZ40974.1| Pal [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 175 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 39/125 (31%), Gaps = 7/125 (5%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDA 274 + + + N F L L + + I I GH D Sbjct: 53 RVIDEQIQLKTQELKSNNVIYFPLDQYDIPSNFFYSLNIHANFLYNNPLQHIKIEGHADE 112 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332 N L RA S L GV +++ IS + + + ++ S NR Sbjct: 113 R---GTPEYNIALGERRANSVKSYLQSKGVLSEQMLTIS-YGKEKPAVLGQNEEAYSKNR 168 Query: 333 RIDIL 337 R+ ++ Sbjct: 169 RVVLI 173 >gi|119385186|ref|YP_916242.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans PD1222] gi|119374953|gb|ABL70546.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222] Length = 197 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ P+ L+++ + S + I GHTDA + N LS RA Sbjct: 96 FAFDSASIAPDQRPALERMCSAMRQSDVGLFRIVGHTDA---KGSDSYNETLSKLRAEEV 152 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + L++ G++ R+ + G L +DP + NRR++ Sbjct: 153 RRWLVQDCGITASRLEAL-GMGKRFLANPADPAAAENRRVEF 193 >gi|153832936|ref|ZP_01985603.1| putative protein F-related protein [Vibrio harveyi HY01] gi|148870859|gb|EDL69758.1| putative protein F-related protein [Vibrio harveyi HY01] Length = 209 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 65/154 (42%), Gaps = 10/154 (6%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + KK +S + N + + ++I + +Q + F S+ ++ Sbjct: 58 AQVPSSMEKKSQGVMSLEMFLNRHQIAHETISGEHLMIRLKEQVH---FQTGSARLSAQS 114 Query: 249 IVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 +Q +G LA T+V + GH D++ A N LS RA + L+ + + Sbjct: 115 QDWIQSLGHYLAGRTDVDVVIDGHADST---GAASFNDSLSEKRAREVEKQLLATSLPRQ 171 Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 R+ GF + + ++ + NRR+++++ Sbjct: 172 RVFS-RGFGEYVPQCSNATASGKACNRRVELMLM 204 >gi|148652725|ref|YP_001279818.1| peptidoglycan-associated lipoprotein [Psychrobacter sp. PRwf-1] gi|148571809|gb|ABQ93868.1| Peptidoglycan-associated lipoprotein [Psychrobacter sp. PRwf-1] Length = 170 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 R+ F S E +L + L+ + + + GHTD + N L Sbjct: 65 RSVVRFAFDSYDIDAEAANILDEQVAFLSSHPDARVLVAGHTDER---GSSEYNHALGER 121 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 RA + L G+ + R+ IS + R A S NRR ++ Sbjct: 122 RAQAVRSYLASKGIMDARVETIS-YGEDRPVAAGSDEASYSQNRRAEL 168 >gi|17545619|ref|NP_519021.1| signal peptide protein [Ralstonia solanacearum GMI1000] gi|17427912|emb|CAD14602.1| putative outer membrane signal peptide protein [Ralstonia solanacearum GMI1000] gi|299066867|emb|CBJ38062.1| putative outer membrane protein, ompA domain [Ralstonia solanacearum CMR15] Length = 218 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 15/120 (12%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD ++ PE L + L T + I GHTD+ + N RLS+ RA Sbjct: 100 DALFDFDKAVLKPEGKSKLDDLVSKLKGITLEVVIAVGHTDSF---GSDKYNDRLSVRRA 156 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA---------NRRIDILVEDRQ 342 + L+ G+ +R+ G +LK+ + NRR+++ V + Sbjct: 157 EAVKGYLVSKGIEANRVYT-EGKGKRQLKVDPKSCKGARKAQIACQQPNRRVEVEVVGTR 215 >gi|46578466|ref|YP_009274.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46447877|gb|AAS94533.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough] gi|311232394|gb|ADP85248.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1] Length = 364 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 49/161 (30%), Gaps = 13/161 (8%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 D L L A + I+ +F + E +L Sbjct: 81 DAQHDARRDLGPLKATLDGAQGKGVDFFDNGNVQILSIDADVLFGPGETRLSKEGERLLA 140 Query: 254 KIGEVLAHSTEVISIRGHTD----------ASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 L + + GH +W LSL RA S Y+ L G Sbjct: 141 TFAPTLRTIEHPLLVAGHASPPRDEQGAGFRLRAEGTLSPSWMLSLRRATSVYRALRDLG 200 Query: 304 VSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342 V R+ + GF + + ANRR+D++++ R Sbjct: 201 VPSSRLI-LEGFGDGHPRHDAFTATGRRANRRVDLVLDKRN 240 Score = 41.9 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 29/238 (12%), Positives = 70/238 (29%), Gaps = 3/238 (1%) Query: 28 NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQ 87 W + Y+D MT+L+AFF+++ ++ D+ ++ + + + T S ++ Sbjct: 14 EGQPGWLLTYSDLMTLLLAFFVLLVSMSTIDERRRRMVIESVFGGIGLMQTGSGEASGDR 73 Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 P + D D K ++D G + I + + L Sbjct: 74 LVPLTDPDAQHDARRDLGPLKATLDGAQGKGV--DFFDNGNVQILSIDADVLFGPGETRL 131 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 +++ E+ T P E+ + + + S Sbjct: 132 SKEGERLLATFAPTLRTIEHPLLVAGHASPPRDEQGAGFRLRAEGTLSPSWMLSLRRATS 191 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMF-DKSSSIPLPETIVVLQKIGEVLAHSTE 264 ++ + ++R + F +V+ ++ L Sbjct: 192 VYRALRDLGVPSSRLILEGFGDGHPRHDAFTATGRRANRRVDLVLDKRNLAWLQQRQG 249 >gi|313205367|ref|YP_004044024.1| ompa/motb domain protein [Paludibacter propionicigenes WB4] gi|312444683|gb|ADQ81039.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4] Length = 446 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 73/210 (34%), Gaps = 14/210 (6%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 L+++Q ++ SL L K+ +++ ++ +++ + +K Sbjct: 244 GVLASTQTTKVTPMSLGVKVGIYFRLAKTREIKIAVELPVITQPAEPAQKTDTVIVSQKI 303 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + + + + T I+I F ++S + E Sbjct: 304 DTVSKIVVEQPVIKDPTPIEKEKRTEQPLDTVSTITIN-------FTQNSDKTIHEEADK 356 Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L+++ ++L + I GHT ++N R+ L RA S L+K G +I Sbjct: 357 LKELTDMLKANPNQCLQITGHTCNW---GTRKNNLRIGLRRANSVKSKLIKQGAPAKKIF 413 Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILV 338 + + NRR++I V Sbjct: 414 T-ESKGEAEPLVPNTSEVNRKKNRRVEIKV 442 >gi|167589725|ref|ZP_02382113.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu] Length = 241 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290 + FD S+ + L + + ++I G+TD++ N RLS Sbjct: 133 QGNANFDVDSAKLTLDARRQLDQFLNTNKGVGFQRVTITGYTDST---GSLAHNRRLSES 189 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA S L G+ + G ++ + NRR++I V Sbjct: 190 RARSVATYLRTGGLQAAQFVS-EGMGPSDPVASNATADGRAQNRRVEIQV 238 >gi|86139145|ref|ZP_01057715.1| peptidoglycan-associated lipoprotein [Roseobacter sp. MED193] gi|85823989|gb|EAQ44194.1| peptidoglycan-associated lipoprotein [Roseobacter sp. MED193] Length = 166 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + +F S P +LQ L + + +I+GH D N L R Sbjct: 56 DRVLFLVDQSTLNPAAETILQGQARWLTANPDYTVTIQGHADEQ---GTRIYNLALGERR 112 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333 A SA + L+ G+S RI ++ + R +++ + NRR Sbjct: 113 ANSAREYLISQGISSSRI-QVVSYGKERPLEICSAESCYAKNRR 155 >gi|37704600|gb|AAR01572.1| OprF [Pseudomonas sp. MFY30] gi|37704670|gb|AAR01607.1| OprF [Pseudomonas sp. MFY234] Length = 314 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + GHT Sbjct: 208 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMTQYPSTTTTVEGHT 267 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 268 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 314 >gi|212704357|ref|ZP_03312485.1| hypothetical protein DESPIG_02412 [Desulfovibrio piger ATCC 29098] gi|212672216|gb|EEB32699.1| hypothetical protein DESPIG_02412 [Desulfovibrio piger ATCC 29098] Length = 331 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F S + + +L + ++ + G TD+ N +LS +RA + Sbjct: 231 FAFDSYALDSKAMGILDEAAGLIKSKPNTKIVLTGWTDSR---GSDAYNAKLSKNRAEAV 287 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L K GV R++ I G K ++D NRR +I Sbjct: 288 KGYLAKQGVPASRMTAI-GKGKSF-KYSNDSEEGRYMNRRTEI 328 >gi|206564091|ref|YP_002234854.1| putative OmpA/MotB family outer membrane protein [Burkholderia cenocepacia J2315] gi|198040131|emb|CAR56114.1| putative OmpA/MotB family outer membrane protein [Burkholderia cenocepacia J2315] Length = 169 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD P+ ++++IG L + + + G++D A + LS R Sbjct: 62 GPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDE---GTAAYDLELSRRR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A L G+ RI + G + + NRR I+V R Sbjct: 119 AEVVAVELADVGLDAKRI-AVVGRGKSDPVGDNKTPVGRAQNRRAAIVVSPR 169 >gi|118588450|ref|ZP_01545859.1| probable outer membrane lipoprotein [Stappia aggregata IAM 12614] gi|118439156|gb|EAV45788.1| probable outer membrane lipoprotein [Stappia aggregata IAM 12614] Length = 162 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 7/116 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 II+ FD+ S++ E + ++ + L + + + I+GH D Sbjct: 40 IINVGRRIYFDQGSAVVTDEARITIENQAKWLNKNKKWLVKIQGHADD---PGSEAAQKT 96 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340 LS RA + L+K GVS R+ + G+ R D S NRR+ + + + Sbjct: 97 LSTQRANAVMAELVKLGVSPKRMW-VKGYGVERPVTDCDQVTCQSQNRRVVVNLRE 151 >gi|308126356|ref|ZP_07663725.1| OmpA family protein [Vibrio parahaemolyticus AQ4037] gi|308109333|gb|EFO46873.1| OmpA family protein [Vibrio parahaemolyticus AQ4037] Length = 290 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F L + L+ + I GH D N +S RA Sbjct: 162 FQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHADNV---GPRLTNLSVSRLRAQQ 218 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 L+ GV+ + I ++ ++ + NRR+ + + Sbjct: 219 VADALIAHGVNPN-IIEVRSHGDRYPVANNNTAAGQAKNRRVTLRLVRDN 267 >gi|206895822|ref|YP_002246694.1| OmpA family protein [Coprothermobacter proteolyticus DSM 5265] gi|206738439|gb|ACI17517.1| OmpA family protein [Coprothermobacter proteolyticus DSM 5265] Length = 237 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 60/183 (32%), Gaps = 10/183 (5%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + F PP+ M+ + +L + + + + + Sbjct: 59 MGVLPSNPTFSPPMPIPPDFIMQGPMTVAELYSNLGGVEKSIQQQYGSEAIEVIEGVNEV 118 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTD-ASPFRNI 280 + I +F S+ PET +L + L + I GH Sbjct: 119 RVRI---SGDLLFMPCSASIRPETSQILSALAPELVKAQKEGYRVYIEGHAAYTLSTCPG 175 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 D++ +S DRA + + G+ + ++ + G+ + + + NRR++I + Sbjct: 176 YIDDFHISSDRALNVLERFKSLGLDDSKM-ALVGYGDNVPVGDVNTPQGQAKNRRVEITI 234 Query: 339 EDR 341 Sbjct: 235 RRD 237 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 14/116 (12%), Positives = 36/116 (31%), Gaps = 4/116 (3%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + + W + Y D +T ++ FF++++ + + + + F + Sbjct: 3 KRKESSGPGAPLWCLSYGDLVTNMLVFFVMLFAFSTLNATKFEQMAYSF----VVALGGG 58 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 G+ D + +T + +G + Q Q I + Sbjct: 59 MGVLPSNPTFSPPMPIPPDFIMQGPMTVAELYSNLGGVEKSIQQQYGSEAIEVIEG 114 >gi|146276615|ref|YP_001166774.1| OmpA domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145554856|gb|ABP69469.1| OmpA domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 182 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 33/104 (31%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F S L + L + + I I GH D N L R Sbjct: 72 DRVFFLVDQSTLNDSARTTLDTQSQWLMANADYAIIIEGHADEQ---GTREYNLALGARR 128 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 A + L+ G++ R+ +S + R S NRR Sbjct: 129 ASAVQDYLISKGIAPSRMKTVS-YGKERPVEVCSTEECYSKNRR 171 >gi|300866278|ref|ZP_07110987.1| putative Outer membrane protein F [Oscillatoria sp. PCC 6506] gi|300335726|emb|CBN56147.1| putative Outer membrane protein F [Oscillatoria sp. PCC 6506] Length = 314 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + +F+ SS P T V+L + L + + I GHTD +DN LS Sbjct: 205 PSDVLFEVGSSALRPGTNVILDNLIADLQNYEGATVRIAGHTDD---AGEVKDNQNLSFA 261 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA + Q L K+ + I G+ R + + NRRI++ + Sbjct: 262 RAQAVEQYLSKTLGEKYHWVAI-GYGESRPSVENTTEANRQRNRRIEVAI 310 >gi|296329419|ref|ZP_06871912.1| outer membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153464|gb|EFG94289.1| outer membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 153 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 3/132 (2%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +Q L S + +K V + ++I+ + FD S P+ Sbjct: 25 AVQALTTTQMRENSIRINALELKNVDILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYD 84 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +L I E + + I+I GHTD+ N++LS RA S L++ G+SEDRI Sbjct: 85 LLNNIKEFVEQNNYEITIVGHTDSI---GSNAYNFKLSRRRAESVKAKLLEFGLSEDRIV 141 Query: 311 KISGFAHHRLKI 322 I + Sbjct: 142 GIEAMGEEQPIA 153 >gi|117618437|ref|YP_858623.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559844|gb|ABK36792.1| outer-membrane protein A [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 368 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 17/121 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSL 289 + +F+ + + P L + + V ++ GHTD N LS Sbjct: 246 SDVLFEFNKATLKPAASQALDNLFSQIVAANPKDGVATVIGHTDRI---GSDAYNQALSE 302 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN----------SANRRIDILVE 339 RA S L+ G+ D++ ++ G ++ + + +RR+++ +E Sbjct: 303 QRARSVADYLIAKGLFADKV-RVEGRGKSSPITGNNCSSGSKPALIACLAPDRRVEVRLE 361 Query: 340 D 340 Sbjct: 362 G 362 >gi|120603950|ref|YP_968350.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4] gi|120564179|gb|ABM29923.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4] Length = 364 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 13/129 (10%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD----------AS 275 + I+ +F + E +L L + + GH Sbjct: 113 VQILSIDADVLFGPGETRLSKEGERLLATFAPTLRTIEHPLLVAGHASPPRDEQGAGFRL 172 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333 +W LSL RA S Y+ L GV R+ + GF + + ANRR Sbjct: 173 RAEGTLSPSWMLSLRRATSVYRALRDLGVPSSRLI-LEGFGDGHPRHDAFTATGRRANRR 231 Query: 334 IDILVEDRQ 342 +D++++ R Sbjct: 232 VDLVLDKRN 240 Score = 41.9 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 29/238 (12%), Positives = 71/238 (29%), Gaps = 3/238 (1%) Query: 28 NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQ 87 W + Y+D MT+L+AFF+++ ++ D+ ++ + + + T S ++ Sbjct: 14 EGQPGWLLTYSDLMTLLLAFFVLLVSMSTIDERRRRMVIESVFGGIGLMQTGSGEASGDR 73 Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 P + + D D K ++D G + I + + L Sbjct: 74 LVPLTAPDAQHDARRDLGPLKATLDGAQGKGV--DFFDNGSVQILSIDADVLFGPGETRL 131 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 +++ E+ T P E+ + + + S Sbjct: 132 SKEGERLLATFAPTLRTIEHPLLVAGHASPPRDEQGAGFRLRAEGTLSPSWMLSLRRATS 191 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMF-DKSSSIPLPETIVVLQKIGEVLAHSTE 264 ++ + ++R + F +V+ ++ L Sbjct: 192 VYRALRDLGVPSSRLILEGFGDGHPRHDAFTATGRRANRRVDLVLDKRNLAWLQQRQG 249 >gi|262369227|ref|ZP_06062555.1| outer membrane protein A [Acinetobacter johnsonii SH046] gi|262315295|gb|EEY96334.1| outer membrane protein A [Acinetobacter johnsonii SH046] Length = 348 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 8/105 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L I GHTD + N RLSL RA Sbjct: 235 RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIEGHTDNT---GPRALNERLSLARA 291 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 S L+ + V R+S GFA + ++ NRR+ Sbjct: 292 NSVKSSLVNEYNVDPARLST-QGFAWDQPIADNNTKEGRAMNRRV 335 >gi|167570798|ref|ZP_02363672.1| ompA family protein [Burkholderia oklahomensis C6786] Length = 224 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD +I P L ++ + + + G+TD + N RLSL RA + Sbjct: 101 LFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 157 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +++ G + N RR+++ V Q Sbjct: 158 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 214 >gi|19881375|gb|AAM00930.1|AF491822_1 hemagglutinin antigen [Avibacterium paragallinarum] Length = 344 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 ++ + F + PE VL I +A + + G+TD Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 269 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330 N +LS RA + L+ GV+++ IS +G+ D + Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDTVKGRKA 325 Query: 331 -------NRRIDILVEDRQ 342 +RR++I V+ + Sbjct: 326 LIACLADDRRVEISVKGEE 344 >gi|78059690|ref|YP_366265.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383] gi|77964240|gb|ABB05621.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 167 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S PE +LQ + L I I+G+TD + N L R+ + Sbjct: 66 FDFDSYEVKPEYQSLLQAHADYLRLHPGRHILIQGNTDER---GTSEYNLALGERRSQAV 122 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 + L GV + +I +S F + + + NRR DI+ Sbjct: 123 LRTLETLGVPDAQIEAVS-FGKEKPVALGHDEASWAQNRRADIV 165 >gi|308270508|emb|CBX27120.1| hypothetical protein N47_A11490 [uncultured Desulfobacterium sp.] Length = 200 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 7/133 (5%) Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISI 268 + + + + I + ++ K ++ P++ ++ I + + I++ Sbjct: 72 KLEQKTIDTLFSEALSIQPKQPFHFILYFKKDTLLTPDSNKLIPDIIKSIQERNSTDITV 131 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327 GHTD N LS RA S +L+ GV + I+ S I ++ Sbjct: 132 VGHTDTL---GSKDYNMALSRKRADSVKDLLIDQGVEANNINTTS-HGKENPLIKTEDNV 187 Query: 328 -NSANRRIDILVE 339 NRR++++V Sbjct: 188 SEPGNRRVEVIVR 200 >gi|50083922|ref|YP_045432.1| putative Outer membrane protein precursor (OmpA-like) [Acinetobacter sp. ADP1] gi|49529898|emb|CAG67610.1| putative Outer membrane protein precursor (OmpA-like) [Acinetobacter sp. ADP1] Length = 355 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L I GHTD + + N RLSL RA Sbjct: 233 RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIDGHTDNT---GPRKLNERLSLARA 289 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + + R+ GFA + + NRR+ + + Sbjct: 290 NSVKSALVNEYNIDPARL-ATQGFAWDQPIADNSTKEGRAMNRRVFATITGSR 341 >gi|42522223|ref|NP_967603.1| peptidoglycan-associated lipoprotein [Bdellovibrio bacteriovorus HD100] gi|39574754|emb|CAE78596.1| peptidoglycan-associated lipoprotein [Bdellovibrio bacteriovorus HD100] Length = 168 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S + + E + + + I GH D+ N L RA + Sbjct: 66 FGYDKSSLDASSKKDIATNVEWMKANPSVRVQIEGHCDSR---GTIEYNVALGERRANAV 122 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 ++ G++ DR+S IS + + D + NRR + + Sbjct: 123 KAYMVSLGIAADRLSTIS-YGKEKPLETGDTEAAWAKNRRANFV 165 >gi|332521031|ref|ZP_08397491.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332043561|gb|EGI79757.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 638 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 13/161 (8%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 K +A K ++L I + +A + G + ++ N FD Sbjct: 474 KAVASKEGYEPEELKYSIDPEIKLDLALKLNLTPEKRAAEVGTDLFVLLDLNPIYFDFDK 533 Query: 242 SIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 S P+ V LQK+ L V I ++ HTD+ N LS R S ++ Sbjct: 534 SYIRPDAQVELQKVINYLNEYPSVSIDVQSHTDSR---GRDAYNKSLSQRRNTSTKNWII 590 Query: 301 KSG-VSEDRISKISGFAHHRLKI--AS-----DPMNSANRR 333 + G +S+ RI G+ +L ++ + + NRR Sbjct: 591 EKGKISKSRI-SGRGYGETQLVNRCSNGVKCSEEEHQQNRR 630 >gi|134277521|ref|ZP_01764236.1| OmpA family protein [Burkholderia pseudomallei 305] gi|134251171|gb|EBA51250.1| OmpA family protein [Burkholderia pseudomallei 305] Length = 224 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ P L ++ + + + G+TD + N RLSL RA + Sbjct: 101 LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 157 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +++ G + N RR+++ V Q Sbjct: 158 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 214 >gi|237756911|ref|ZP_04585384.1| putative OmpA/MotB domain protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237690932|gb|EEP60067.1| putative OmpA/MotB domain protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 260 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +SS E + L + + L + + I+G+TD + N +L+L RA + Sbjct: 155 FYSNSSKIKKEYLPYLNVVAKYLKTHPDVKVKIKGYTDNI---GSKKYNDKLALKRAEAV 211 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 Q L+K GVS +RI I G ++++ NRR + + Sbjct: 212 KQYLIKLGVSPNRIM-IDGVGKSEYIVSNNNELDRFTNRRAEFYI 255 >gi|242278716|ref|YP_002990845.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] gi|242121610|gb|ACS79306.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] Length = 400 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 71/178 (39%), Gaps = 17/178 (9%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + PP + I ++ Q +AK + + + + ++ I + Sbjct: 232 MPNMVQMQSPPQNGNTIPQSTPTQQEQPVAKHATPKAAPAPVQSTTQAPKAQSKPRSINL 291 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARD 283 ++ FD SS PE+ +L ++G+ L + I I GHTD+ Sbjct: 292 AVQ-------FDVDSSQIKPESYSLLNELGKALISDRLKDKRIVIGGHTDSD---ASPEY 341 Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 N++LS +RA S + L + ++ RI +GF + + + NRR+ + + Sbjct: 342 NFKLSKERAESVKKYLTDNFPIAPQRIGT-TGFGESNPLVPNTTKYNKLLNRRVQVSI 398 >gi|7532784|gb|AAF63228.1| outer membrane protein [Acinetobacter sp.] Length = 368 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L I GHTD + N RLSL RA Sbjct: 250 RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIEGHTDNT---GPRALNERLSLARA 306 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + ++ NRR+ + + Sbjct: 307 NSVKSSLVNEYNVDASRLST-QGFAWDQPIADNNTKEGRAMNRRVFATITGSR 358 >gi|129141|sp|P04845|OMPA_SERMA RecName: Full=Outer membrane protein A; Flags: Precursor gi|758300|emb|CAA25254.1| ompA protein [Serratia marcescens] Length = 359 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 27/135 (20%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S E L ++ L+ + + G+TDA + N +LS Sbjct: 229 KSDVLFNFNKSTLKAEGQQALDQLYTQLSSMDPKDGSVVVLGYTDAV---GSDQYNQKLS 285 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA---------NRRID 335 RA S L+ G+ D+IS G + + +RR++ Sbjct: 286 EQRAQSVVDYLVSKGIPSDKISA-RGMGEADAVTGNTCGYKSGRATKAQIVCLAPDRRVE 344 Query: 336 I-------LVEDRQG 343 I +V QG Sbjct: 345 IEVKGIKDVVTQPQG 359 >gi|58422897|gb|AAW73248.1| OmpA [Citrobacter freundii] Length = 222 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 7/96 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N LS Sbjct: 114 KSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 170 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 RA S L+ G+ D+IS G + Sbjct: 171 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGN 205 >gi|296447841|ref|ZP_06889753.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b] gi|296254641|gb|EFH01756.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b] Length = 209 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 10/179 (5%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + + P+S+ A + + ++ V T Sbjct: 27 VAQDAATFVKALSQPVSRSISAAPSVMPEHIAQEQFVQGLGKRSANRSL--TVSEVTQID 84 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRN 279 I+ + + F +S+ V++++G L I GHTDA Sbjct: 85 EIVATRREIDFEVNFALNSADLRDSDRKVVEQLGVALGEPALKGGTFLIMGHTDAR---G 141 Query: 280 IARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 A+ N +LS RA + +VL+ + GV+ +R+ + G+ LK +D S NRR+ ++ Sbjct: 142 SAKLNQKLSERRANAVKKVLVAEYGVAPERLVAV-GYGQTHLKNPNDGFASENRRVQVV 199 >gi|261822111|ref|YP_003260217.1| outer membrane protein A [Pectobacterium wasabiae WPP163] gi|261606124|gb|ACX88610.1| OmpA domain protein transmembrane region-containing protein [Pectobacterium wasabiae WPP163] Length = 361 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + E L ++ L+ + + G TD + N LS Sbjct: 233 KSDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRL---GSEQYNQALS 289 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +++S G + + +A +RR++I Sbjct: 290 EKRAQSVVDYLVSKGIPANKVSA-RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIE 348 Query: 338 VED 340 V+ Sbjct: 349 VKG 351 >gi|144899936|emb|CAM76800.1| OmpA/MotB [Magnetospirillum gryphiswaldense MSR-1] Length = 220 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 70/169 (41%), Gaps = 18/169 (10%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 ++ ++++ ++++ + V T G+++++ MF S+ Sbjct: 58 KQPPQRPIENMRQELTQAAA--TVQGSDDAVDVGTDDRGVVMNL---DAGAMFTPGSADI 112 Query: 245 LPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLM 300 P + +L+++ L I+GHTD++P + N+ L+ RA + + + Sbjct: 113 KPTMVPLLKELAGTLNQPRFDNYRLEIQGHTDSTPVKTAQFPSNFDLASARALATMRAFV 172 Query: 301 KSGVSEDRISKISGFAHHRLKIASD--------PMNSANRRIDILVEDR 341 GV+E ++ ++ + ++ + + NRR+ I + R Sbjct: 173 SLGVAESKMI-VAAYGQFAPRVPNTLEDGTPLPANQALNRRVAIHIYPR 220 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 45/161 (27%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 + SW Y D +T+L+ FF+++ I+ D + ++ Sbjct: 6 KKQSQEVDSSWMETYGDMVTLLLCFFILLASISKVDSVIYEKVQSGMTSEIGKQPPQRPI 65 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 Q + ++ + + T + + + + ++ Sbjct: 66 ENMRQELTQAAATVQGSDDAVDVGTDDRGVVMNLDAGAMFTPGSADIKPTMVPLLKELAG 125 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 N D+ + + + + + F ++ Sbjct: 126 TLNQPRFDNYRLEIQGHTDSTPVKTAQFPSNFDLASARALA 166 >gi|114570660|ref|YP_757340.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10] gi|114341122|gb|ABI66402.1| OmpA/MotB domain protein [Maricaulis maris MCS10] Length = 304 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 8/111 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + + +F S + LP++ L + ++L + + GHTD N LS Sbjct: 196 RVDGLLFAHDSDVLLPDSATALTALRDLLTERPSLTLYVVGHTD---MSGSLTYNMSLSE 252 Query: 290 DRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 RA S L++ G+ DR++ G + ++ + NRR++I+ Sbjct: 253 RRAASVVTALVEDYGIRMDRLTAA-GVGPLAPEASNGTDDGRTLNRRVEIV 302 >gi|332290760|ref|YP_004429369.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332168846|gb|AEE18101.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 648 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 N F+ P+ V L K+ + I +R HTD+ N LS Sbjct: 534 DLNPIYFNFDKYDIRPDAEVELAKVLVYMETYPSVRIDVRSHTDSR---GRDAYNLNLSQ 590 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 +R S L+ G+S R+ G+ +L S + NRR + +V Sbjct: 591 NRNVSTRDWLISKGISASRL-TGKGYGETQLVNDCGNGVRCSKDQHQLNRRSEFIVLS 647 >gi|241667271|ref|ZP_04754849.1| OmpA family protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875822|ref|ZP_05248532.1| OmpA family protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254841843|gb|EET20257.1| OmpA family protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 418 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 9/114 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIA------RDNWRLSL 289 FD S + +L K+ L T +IRG+ + + N RLS Sbjct: 71 FDADSYNLNDQAKQILNKLYAYLKLTDTTTFTIRGYAGKVESKLLTDKNILTEYNIRLSK 130 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 +RA S + L++ G+ ++ I + +D + N+R++I ++ R Sbjct: 131 NRAESVEEYLVRRGLDKNNGIIIKALGYQDPIAPNDTSSNRAINQRVEITLKSR 184 >gi|228471058|ref|ZP_04055893.1| OmpA family protein [Porphyromonas uenonis 60-3] gi|228307180|gb|EEK16217.1| OmpA family protein [Porphyromonas uenonis 60-3] Length = 348 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 I N F + + E VL + +++ + + + I GHT N R Sbjct: 241 IEKDFNAAKFVQGKADLTDEAKFVLHDLAKLMEANPDLKLKIEGHTSEE---GDEAFNQR 297 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 LS +RA A L+ G+S DR+ G S+P NRR + +V Sbjct: 298 LSEERAQVAVDFLISQGISADRLQA-EGKGSSEPIDPSNPD--VNRRTEFIV 346 >gi|227538215|ref|ZP_03968264.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227241924|gb|EEI91939.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 650 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 12/116 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + +D + S P+ VL ++ + + I + HTD+ N +LS R Sbjct: 538 DNIYYDFNKSDIRPDAAKVLDQLVNTMTENPTLQIELSSHTDSR---GSDSYNMKLSDRR 594 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 A SA + ++ G++++R+ G+ +L ++ + ANRR ++ V Sbjct: 595 AKSAVEYIISKGIAKERLVS-KGYGESKLVNECANGVKCTEEQHQANRRTEVKVLK 649 >gi|167626696|ref|YP_001677196.1| OmpA family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596697|gb|ABZ86695.1| OmpA family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 418 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 9/114 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIA------RDNWRLSL 289 FD S + +L K+ L T +IRG+ + + N RLS Sbjct: 71 FDADSYNLNDQAKQILNKLYAYLKLTDTTTFTIRGYAGKVESKLLTDKNILTEYNIRLSK 130 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 +RA S + L++ G+ ++ I + +D + N+R++I ++ R Sbjct: 131 NRAESVEEYLVRRGLDKNNGIIIKALGYQDPIAPNDTSSNRAINQRVEITLKSR 184 >gi|167648617|ref|YP_001686280.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31] gi|167351047|gb|ABZ73782.1| OmpA/MotB domain protein [Caulobacter sp. K31] Length = 401 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 29/275 (10%), Positives = 68/275 (24%), Gaps = 7/275 (2%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 ++ L + + N++D+S + + G+ + Sbjct: 129 DSWSLMVNVLYDFAPDSWINPYLGAGVGINRLDVSALGQFSGVPGPINAGNPAIQNLTVD 188 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + + + + + K ++ Sbjct: 189 DNDMAVAWQAIAGASIKATDKLKVDVTYRWFATQDQAWNATGSHLLQTGNFEGQYKDQSL 248 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 R + + + F + P Sbjct: 249 TVGLRYSFASPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAYEAREFIVYFPFDQYVLTP 308 Query: 247 ETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 E V+ + + + + GHTD + N +LS RA + L+ +GV+ Sbjct: 309 EAQSVVSEAANYATSGHATKLVVVGHTDT---SGSPKYNAKLSERRAKAVADALVGAGVA 365 Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 D + + +A+ NRR I + Sbjct: 366 ADAL-AVDWKGESAPAVATGDGVKEPLNRRSTISI 399 >gi|294675945|ref|YP_003576560.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB 1003] gi|294474765|gb|ADE84153.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003] Length = 739 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ SS+ PE L + + +A + + GHTD+ N +LS RA + Sbjct: 498 FEPSSATIKPEDGPKLDALAKAMAQCQDFRMEVAGHTDSQ---GSDEGNRKLSQARAEAV 554 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RRIDILVEDRQ 342 L V R G+ + +D RRI+ ++ D + Sbjct: 555 ITALSARRVL-TRNLTPKGYGESQPIAENDTDKGREATRRIEFVLLDAK 602 >gi|312115989|ref|YP_004013585.1| peptidoglycan-associated lipoprotein [Rhodomicrobium vannielii ATCC 17100] gi|311221118|gb|ADP72486.1| peptidoglycan-associated lipoprotein [Rhodomicrobium vannielii ATCC 17100] Length = 169 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 38/108 (35%), Gaps = 8/108 (7%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ P+ +L L T I+I GH D N L RA + Sbjct: 62 TDSAELSPDGQQILNAQAVWLRQYTNFPITIEGHADER---GTREYNIALGAKRAETTKN 118 Query: 298 VLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 L+ G+S RI IS + R S NRR + V + G Sbjct: 119 FLIAQGISPQRIRTIS-YGKERPVAVCDDISCWSQNRRT-VTVLEGGG 164 >gi|269119253|ref|YP_003307430.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386] gi|268613131|gb|ACZ07499.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386] Length = 366 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 26/143 (18%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS----- 267 V+ I ++ + FD + ++ + + + + + Sbjct: 206 PIVVTPEKPAPIGKTMDLTVSGAYFDFDKATVKENAKQEIRGAAQQIKNLNQNNNLTGVL 265 Query: 268 -IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-----SGVSEDRISKISGFAHHRLK 321 I GHTD+ + N +LS RA + V + +G+ + ++G+ R Sbjct: 266 DIAGHTDS---KGAKEYNQKLSERRAAAVADVYTQVIGTGNGIRYN----VAGYGEDRPV 318 Query: 322 IASD--------PMNSANRRIDI 336 + + NRR+++ Sbjct: 319 APNTLPNGKDNPEGRARNRRVEV 341 >gi|71282015|ref|YP_270145.1| sodium-type flagellar protein MotY [Colwellia psychrerythraea 34H] gi|71147755|gb|AAZ28228.1| sodium-type flagellar protein MotY [Colwellia psychrerythraea 34H] Length = 291 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 40/300 (13%), Positives = 90/300 (30%), Gaps = 21/300 (7%) Query: 44 LMAFFLVMWII--NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLS 101 + +FLV+ + + D K I QY + S + + + Sbjct: 1 MSTYFLVIASLVTSLLASDVKAGIRQYSADIHTSKWQLSDDSRLQCTLSHQIPRYGEARF 60 Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161 + K +++ ++ Y E + + + + ++ Sbjct: 61 SAKASRKLNMEFELDMMLLPDNYSLAEVRSVAPNWQPGTGSRTLANMKLHKQFNPSLPKK 120 Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 +++ E P + + K + + Sbjct: 121 VAWTMLSELEQGMSPTFYYNDWYSEQDKISVGLSTARFKKAYRDF----------VGCVG 170 Query: 222 TGILISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFR 278 + S D T + + SS + ++ I + L+ E++ I ++D+ Sbjct: 171 NLLNYSFDDIAYTVLNYQSSSDKFTKASQRRIEMIRQYLSLDPELELVLIDAYSDSY--- 227 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 N +LS RA +++G+ RI G+ R ++D NRR+ I Sbjct: 228 GGRWSNLKLSERRAAKIRDYFVENGIEVSRIEA-KGYGEKRHISSNDTTLGRGKNRRVVI 286 >gi|220913721|ref|YP_002489030.1| OmpA/MotB domain protein [Arthrobacter chlorophenolicus A6] gi|219860599|gb|ACL40941.1| OmpA/MotB domain protein [Arthrobacter chlorophenolicus A6] Length = 266 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 74/210 (35%), Gaps = 11/210 (5%) Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + + +NSL T + ++ LA+K +L L Sbjct: 45 DQAKFDKLRNSLATGFGAVASQTADTASGTVVPPDQVNKDAEAFSSLDLAIKEVDKLTAL 104 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 +++ + L + V F+ + G+ + ++ + F VL I Sbjct: 105 QQQMETALKA---QQLDSNVEFQISERGLTVKLV--GSQAFFLPDRPELTRRASQVLDTI 159 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISG 314 LA + I + GH A+ W LS R+ + + L+ GV+ RI ++ Sbjct: 160 SPTLAPAGLEIMVEGH--AANGITAFPSTWELSSARSVNVLRYLVDRGGVAPGRIGAVA- 216 Query: 315 FAHHRLKIASDPMN--SANRRIDILVEDRQ 342 F R NRR+D++V + Sbjct: 217 FGSARQVNDDSTEELMELNRRVDVVVLSDK 246 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 5/168 (2%) Query: 17 IKKKVAIDDTP---NNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 +K++ P + W Y D +TVLM F+V++ ++ D + Sbjct: 1 MKRRRRGGHEPEEEHVDERWMASYMDMVTVLMCMFIVLFAMSTVDQAKFDKLRNSLATGF 60 Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 + AS+ Q D + ++ + Q++ L+ Sbjct: 61 GAV--ASQTADTASGTVVPPDQVNKDAEAFSSLDLAIKEVDKLTALQQQMETALKAQQLD 118 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + Q ++ + L +L + ++ + P L+ Sbjct: 119 SNVEFQISERGLTVKLVGSQAFFLPDRPELTRRASQVLDTISPTLAPA 166 >gi|188579997|ref|YP_001923442.1| OmpA/MotB domain protein [Methylobacterium populi BJ001] gi|179343495|gb|ACB78907.1| OmpA/MotB domain protein [Methylobacterium populi BJ001] Length = 282 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 67/207 (32%), Gaps = 10/207 (4%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + R + + + E E++ A + + Sbjct: 32 AMGAVLALAPARANPLTEVPGTRPPAAEGEAGTEAPPPRDEVAERVEAGAVNPSANAIIR 91 Query: 198 KISSTLSGLVADNIVKG-VLFETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKI 255 ++ G V + + + T F S+ PE + L+ + Sbjct: 92 SLAPFADGNPGRPAAPVAVSPGDGGPSLRVDPARSVDLTVFFAYDSARLTPEARIQLEPL 151 Query: 256 GEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISK 311 G+ L I GHTDA N RLSL RA + L + G+ R+ + Sbjct: 152 GQALQSRELAGHGFLIAGHTDA---AGGLGYNRRLSLARARAVRAHLAETYGIDPHRL-R 207 Query: 312 ISGFAHHRLKIASDPMNSANRRIDILV 338 I G+ R K + P NRR+++ + Sbjct: 208 IHGWGPGRPKDPARPFARINRRVEVSL 234 >gi|262276102|ref|ZP_06053911.1| peptidoglycan-associated outer membrane lipoprotein [Grimontia hollisae CIP 101886] gi|262219910|gb|EEY71226.1| peptidoglycan-associated outer membrane lipoprotein [Grimontia hollisae CIP 101886] Length = 173 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 7/117 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIAR 282 I + + Q T F LP+ +L E L + ++ + GH D Sbjct: 60 IRNNELRQSQTVYFSFDDYSVLPQFEDMLDAHAEFLRANADIKVVVEGHADER---GTPE 116 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 N L RA + + L GV +IS +S + + + ++ NRR ++ Sbjct: 117 YNIALGERRANAVAKYLQALGVPSSQISIVS-YGEEKPLVLGQGEDAYSKNRRAVLV 172 >gi|126664268|ref|ZP_01735260.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteria bacterium BAL38] gi|126623800|gb|EAZ94496.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteria bacterium BAL38] Length = 635 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 14/165 (8%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + + + ++ T + + + V T + + FD Sbjct: 476 ASKEEYETSEKPFGPVTETGKSEINIELKRNVFPIQVGTDLAKLF--NISIIYFDLDKWD 533 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + L+KI V+ E+ IR HTD+ N LS RA + + ++KS Sbjct: 534 IRQDAAEDLEKIISVMNQYPEMTIDIRSHTDSRQTH---AYNELLSDRRAKATLEFMVKS 590 Query: 303 GVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 G++ +R++ G+ +L S+ + NRR + +V Sbjct: 591 GINRNRLTA-KGYGETQLVNECSDGVLCSEEDHQKNRRSEFIVMK 634 >gi|91228645|ref|ZP_01262561.1| putative outer membrane protein [Vibrio alginolyticus 12G01] gi|91187796|gb|EAS74112.1| putative outer membrane protein [Vibrio alginolyticus 12G01] Length = 204 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 9/123 (7%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARD 283 + S + + +F S + P + ++ + L I I+G+ + A Sbjct: 72 VDSSQEMQIRVLFANDSDVINPIFTQQILELSDFLKEYPNTSIEIQGYASRT---GTAEH 128 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM---NSANRRIDILVED 340 N LS RA + + LMK+G+S DR+ I G+ ++ NRR+ V Sbjct: 129 NLDLSKRRAENVRKELMKNGISGDRV-TIVGYGDTV-LATQGTDQVSHALNRRVTATVIG 186 Query: 341 RQG 343 +G Sbjct: 187 HKG 189 >gi|167035318|ref|YP_001670549.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1] gi|166861806|gb|ABZ00214.1| OmpA/MotB domain protein [Pseudomonas putida GB-1] Length = 308 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F + L I + + V I GH+D N LS RA + Sbjct: 179 FPGGGTELDASARARLDVILDYMKADPTVNHIELDGHSDN---SGNRLTNRDLSRRRALA 235 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 GV+E++I + + ++ + NRR++I ++ Sbjct: 236 VADYFKAHGVAEEQII-VRFHGEQYPLVKNNSAANRARNRRVNIELDR 282 >gi|27904776|ref|NP_777902.1| peptidoglycan-associated lipoprotein precursor [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46396115|sp|Q89AJ5|PAL_BUCBP RecName: Full=Peptidoglycan-associated lipoprotein; Flags: Precursor gi|27904174|gb|AAO27007.1| peptidoglycan-associated lipoprotein precursor [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 173 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 7/144 (4%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + + + + F + + + NT F ++ + L + Sbjct: 32 NNVDTFYEQETNKSKQQLTNFSEDNFDETLEKLKKGNTIYFPFNNHQVNSKYAKNLNDLA 91 Query: 257 EVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + L H + I GHTD+ + N L RA S L GVS +I+ +S + Sbjct: 92 QFLCHHSNQKIMIEGHTDSR---GTNKYNMYLGQKRADSVKLYLESKGVSNQQITTVS-Y 147 Query: 316 AHHRLKIASDPMN--SANRRIDIL 337 + + N S NRR I+ Sbjct: 148 GSSKPVAHGNKENSYSKNRRSVII 171 >gi|327404809|ref|YP_004345647.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327320317|gb|AEA44809.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 454 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F +S PE+ VL++I L+ + + I GHTD+ N LS RA + Sbjct: 351 LFASNSDQLKPESYGVLKEIATALSENPAVRVKIVGHTDSD---GEESFNAELSKKRALA 407 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 Q L+ + R+ G + ++ + NRR++ L Sbjct: 408 VKQALISEFKIEASRMET-DGKGENEPTDSNATSVGKANNRRVEFL 452 >gi|294676664|ref|YP_003577279.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB 1003] gi|294475484|gb|ADE84872.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003] Length = 185 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +F S+ LQ+ + I GHTD+ N RLS RA + Sbjct: 87 LFATDSTKLTASGRGYLQQFFTTAQARS--FIITGHTDSR---ASDEYNMRLSKGRAEAV 141 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 V + G + ++ + K + + NRR++++ Sbjct: 142 AGVAQQVGAP---VLAVNWYGERMPKATNATAAGMAQNRRVEVI 182 >gi|260574902|ref|ZP_05842904.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] gi|259022907|gb|EEW26201.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] Length = 328 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++ + LQ + + L + + GHTDA N LS RA S Sbjct: 223 FSSGTAALAEGSYASLQALADYLKAHPDRAIAVVGHTDA---SGPLAVNIALSRKRAASV 279 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 QVL+ S GV ++ G + ++ + NRR+++++ Q Sbjct: 280 RQVLIDSLGVPATQVIA-EGVGFLVPRASNLTEAGRAQNRRVEVMLTSTQ 328 >gi|256019218|ref|ZP_05433083.1| outer membrane protein A [Shigella sp. D9] Length = 109 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 15/108 (13%) Query: 244 PLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + + L + L I + GHTD N LS RA + Q L+ Sbjct: 1 MSQQGLADLDHLAMNLNSFEKINGIIVIGHTDRL---GSEDYNLTLSRKRAETVRQYLIA 57 Query: 302 SGVSEDRISKISGFAHHRLK----IASDPMN-----SANRRIDILVED 340 G+ ++I+ I G + +D + NRR+++ V+ Sbjct: 58 KGLPAEKITSI-GMGKSQPVKKCKYNNDRASLIVCLQPNRRVEVEVDG 104 >gi|83643990|ref|YP_432425.1| outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] gi|83632033|gb|ABC28000.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] Length = 327 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 51/141 (36%), Gaps = 8/141 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + + V E G+ FD + PE+ L +I +++ Sbjct: 189 QVVESAPMQSGMVKVDAEAMAKGLDAEGHIALYGVYFDTDKADIKPESAETLAEIAKLMK 248 Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHH 318 + I GHTD N LS RA + L+ + +R++ + G Sbjct: 249 SQPSLKVLIVGHTDN---AGALDYNRSLSERRAKAVMDALVSQYKIGAERMTAL-GVGMA 304 Query: 319 RLKIASDPMN--SANRRIDIL 337 +++ + NRR++++ Sbjct: 305 APVASNENEAGKAKNRRVELV 325 >gi|225849664|ref|YP_002729898.1| OmpA/MotB [Persephonella marina EX-H1] gi|225646381|gb|ACO04567.1| OmpA/MotB [Persephonella marina EX-H1] Length = 286 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ E + L I + L + I G+TD+ N RL+ RA + Sbjct: 181 FEFDKYQIKKEYLPYLNVISKYLKSKPNLKVKIVGYTDSI---GSKSYNDRLAYKRALAV 237 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 + L+K G+ +RI +I G + + NRR D V + Sbjct: 238 KEYLIKQGIPAERI-EIVGRGKENYLVDNKTWLNRFTNRRADFFVME 283 >gi|124002133|ref|ZP_01686987.1| outer membrane protein OmpA family [Microscilla marina ATCC 23134] gi|123992599|gb|EAY31944.1| outer membrane protein OmpA family [Microscilla marina ATCC 23134] Length = 617 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 7/110 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 F + +++ + + L ++ V I + GHTD +N LS RA Sbjct: 508 RVFFMYKKAEMHKKSLPAAKALLTFLKNNPGVSIEVSGHTDDV---GSNSNNVALSQQRA 564 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 Y L+ G+ ++R+ K G+ I ++ + NRR D V Sbjct: 565 NVVYNWLVSKGIEKERLVK-KGYGAKVPIIPNETNYARIVNRRTDFRVVS 613 >gi|264677754|ref|YP_003277660.1| OmpA/MotB [Comamonas testosteroni CNB-2] gi|299529322|ref|ZP_07042761.1| OmpA/MotB [Comamonas testosteroni S44] gi|262208266|gb|ACY32364.1| OmpA/MotB [Comamonas testosteroni CNB-2] gi|298722700|gb|EFI63618.1| OmpA/MotB [Comamonas testosteroni S44] Length = 175 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 7/107 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 FD S + ++ + + + + + GHTD N L R Sbjct: 70 RIVYFDFDSYSVKADAQPQIEAHAKFIKANPAAKVQLEGHTDER---GGREYNLALGQKR 126 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 A + + L GV++ ++ +S + + + + NRR++I Sbjct: 127 AEAVRRSLGLLGVNDAQVEAVS-YGKEKPAAEGHSEDAYAQNRRVEI 172 >gi|149191535|ref|ZP_01869782.1| protein F-related protein [Vibrio shilonii AK1] gi|148834609|gb|EDL51599.1| protein F-related protein [Vibrio shilonii AK1] Length = 208 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 74/209 (35%), Gaps = 17/209 (8%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 L+ S + S T L + E + E P ++ + + R Sbjct: 10 VLAASLLTGCSAVSSTTSKLFPDMLQTAPKSEFDVMHPEWADAPKIASTSVQGPYGQMRT 69 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + LV + + + ++I + + + F+ S+ + L Sbjct: 70 ES----WNVLERYLVNNGLDYEL---VPGDYVMIRLKQKIH---FNTGSAHVASTSAQWL 119 Query: 253 QKIGEVLAHSTEVISIRG-HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 Q++ L+ + + G HTD + N +LS RA S Q L+ V +I Sbjct: 120 QQLASFLSGQQGIDVVIGGHTDNT---GTVAINDKLSDKRAESVRQTLISQRV-PRQIIY 175 Query: 312 ISGFAHHRLKIASDP--MNSANRRIDILV 338 G+ + + + + NRR+++ + Sbjct: 176 TRGYGENVPECTNQTQYGKACNRRVELTL 204 >gi|21243867|ref|NP_643449.1| outer membrane protein P6 [Xanthomonas axonopodis pv. citri str. 306] gi|21109468|gb|AAM37985.1| outer membrane protein P6 precursor [Xanthomonas axonopodis pv. citri str. 306] Length = 181 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD PE ++ + L I+++G+ D N L Sbjct: 72 RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 128 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337 R + L +G S +++ +S + R +++ S NRR++I+ Sbjct: 129 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTESNESCWSQNRRVEIV 177 >gi|296156473|ref|ZP_06839311.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] gi|295893072|gb|EFG72852.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] Length = 233 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 63/169 (37%), Gaps = 9/169 (5%) Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 L K+ +LE + + + K++ + L+ L + + Sbjct: 52 QLAKTRELEIKALERHALTEAASAGNAQPSNAMPSAPDVSKKRLLALLAPLQD---KRQI 108 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDA 274 G+ I+I + +F+ + LPE+ VL +I VL I + GHTD Sbjct: 109 AISNAAQGVEIAINAK---ILFNSGDARLLPESFEVLNQIAGVLRDRSKNNILVEGHTDN 165 Query: 275 SPFRNI-ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 P NW LS RA + + G+ R++ I G A + I Sbjct: 166 VPISTAKYESNWELSSARAGAVVRFFADKGIEAHRMAAI-GRADNFPLI 213 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 25/73 (34%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83 ++ G W I YAD +T LM FL ++++ + + + + Sbjct: 21 GESEEQSGRWLISYADLITTLMVLFLALYVLQLAKTRELEIKALERHALTEAASAGNAQP 80 Query: 84 FDEQNPPERSSQN 96 + S+ Sbjct: 81 SNAMPSAPDVSKK 93 >gi|254473105|ref|ZP_05086503.1| OmpA/MotB [Pseudovibrio sp. JE062] gi|211957826|gb|EEA93028.1| OmpA/MotB [Pseudovibrio sp. JE062] Length = 160 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F + S VL K + L H I+I GH D + N L R Sbjct: 53 DRVFFLNNQSSLDGAARGVLDKQAQWLQHYKNYSITIEGHADER---GTRQYNIALGARR 109 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 A + + L+ G+S RI IS + R + S NRR + V + Q Sbjct: 110 AAAVREYLVAKGISPSRIKTIS-YGKERPVAVCNAASCWSQNRRA-VTVLNGQ 160 >gi|170693033|ref|ZP_02884194.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] gi|170142031|gb|EDT10198.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] Length = 259 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 48/171 (28%), Gaps = 17/171 (9%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 ++ K ++ A + + + +F S Sbjct: 93 QVQFDKNMRVSATYWRDPQCADLMSDAAPVAPAPVAAKPAALEQFTFEGEALFPFGKSSL 152 Query: 245 L---PETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 P L E + I + GHTD N LS RA + L Sbjct: 153 NSMLPRGRAELDAAIEKIRKEDGVTRIDVVGHTDRI---GSDESNRALSQARAETVKAYL 209 Query: 300 MKSGVSEDRISKISGFAHHRLKI---ASDPMN-----SANRRIDILVEDRQ 342 + G+ +RI + SG + + +RR+ I + ++ Sbjct: 210 VAHGLDAERI-RASGAGSSQPVSHCPPGETPAVIACLQKDRRVTIAIYGQR 259 >gi|78358627|ref|YP_390076.1| OmpA family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221032|gb|ABB40381.1| OmpA family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 306 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 17/155 (10%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L L+ ++ + F+ ++SI D +F S + LP I VL +I L Sbjct: 90 QPLKDLIWEDPDSDLNFQQNSMVQILSINDA---VLFRPGSFVLLPGGIKVLDRILPWLL 146 Query: 261 HSTEVISIRGHTDASPFRNIARD-----------NWRLSLDRAYSAYQVLMKSGVSEDRI 309 + + GHT WRLS R + Y+ L G+ + + Sbjct: 147 RVEHPLLLAGHTATQRAEEGQEYKVVFDEKQLAPTWRLSFMRVMAVYRYLTGRGMPAENL 206 Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + FAH+R + N R+DI+++ R Sbjct: 207 K-VEAFAHYRPRFDGTTPDGRRRNSRVDIVLDKRN 240 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 35/104 (33%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I ++D MT+++ FF+++ ++ D+ K + + ++ Sbjct: 17 WLITFSDMMTLMLTFFVLLVSMSVLDERRKLVVLASVTGAFGIGSGSFNPHAEDGANRIV 76 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 S+++ + + ++ Q + + Sbjct: 77 EPGPMQMGSVNDLQPLKDLIWEDPDSDLNFQQNSMVQILSINDA 120 >gi|85710723|ref|ZP_01041787.1| probable peptidoglycan-associated lipoprotein precursor [Erythrobacter sp. NAP1] gi|85687901|gb|EAQ27906.1| probable peptidoglycan-associated lipoprotein precursor [Erythrobacter sp. NAP1] Length = 210 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 38/106 (35%), Gaps = 8/106 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD LQ + A + +I GH D N L RA +A Sbjct: 108 FDTDRFNIDSTDAAALQAQAQYFARFPQLTFTIEGHCDER---GTREYNLALGERRANAA 164 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR-IDILV 338 L+ GVS +RI +S + R + + NRR I++ Sbjct: 165 KNYLVSLGVSPNRIRTVS-YGKERPVALASTPAAWSQNRRAASIII 209 >gi|114319403|ref|YP_741086.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114225797|gb|ABI55596.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 184 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 R T FD S E + V++ L+ + I GHTD N L Sbjct: 76 SRQTVYFDFDRSEIRNEDMPVIEAHARFLSGHPDRRMTIEGHTDER---GSREYNLALGE 132 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + ++++ +GV ED++ +++ + +++ NRR +++ Sbjct: 133 RRAEAVKRIMVLNGVDEDQL-EVTSYGEENPVALGSNEEAWQQNRRAELI 181 >gi|313835693|gb|EFS73407.1| OmpA family protein [Propionibacterium acnes HL037PA2] gi|314928364|gb|EFS92195.1| OmpA family protein [Propionibacterium acnes HL044PA1] gi|314970216|gb|EFT14314.1| OmpA family protein [Propionibacterium acnes HL037PA3] Length = 115 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 14/118 (11%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287 D + +FD S + P ++ ++ + + I + G+TD N L Sbjct: 4 DLDASVLFDLDSDVVKPAGRQIIDRMVKQFVARKVSGKIGVTGYTDN---SGSVAHNLDL 60 Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 S RA S ++L + GV+ +G ++D NRR+ I V++ Sbjct: 61 SRRRAVSVARLLGLQLSKGVT----LVTAGKGEADPVASNDSEAGRRLNRRVTITVKE 114 >gi|167841641|ref|ZP_02468325.1| ompA family protein [Burkholderia thailandensis MSMB43] Length = 224 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD +I P L ++ + + + G+TD + N RLSL RA + Sbjct: 101 LFDFDKAILKPAGKQKLDELASKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 157 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +++ G + N RR+++ V Q Sbjct: 158 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 214 >gi|152996217|ref|YP_001341052.1| peptidoglycan-associated lipoprotein [Marinomonas sp. MWYL1] gi|150837141|gb|ABR71117.1| Peptidoglycan-associated lipoprotein [Marinomonas sp. MWYL1] Length = 192 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 53/175 (30%), Gaps = 9/175 (5%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET--TRTGI 224 I S ++ A+ D + ++ E T Sbjct: 19 IAGCSTTATDTDSSTVAEDANSTEQTNGAAENTDQAFGAGQGDAMTSVIVEEEVTTNDNG 78 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARD 283 + S+ + FD SI PE+ L K E L + + GH D Sbjct: 79 MDSLAGVQTVFYFDFDKSIVRPESREALAKHAEYLVSHPDARIVLEGHADER---GTREY 135 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 N L RA + + L GV+ +I +S F NRR+++ Sbjct: 136 NMALGERRAKAISRYLTIQGVAASQIETVS-FGEEVPVAFGHDSNAWQLNRRVEV 189 >gi|89889916|ref|ZP_01201427.1| hypothetical protein BBFL7_01736 [Flavobacteria bacterium BBFL7] gi|89518189|gb|EAS20845.1| hypothetical protein BBFL7_01736 [Flavobacteria bacterium BBFL7] Length = 318 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 9/123 (7%) Query: 222 TGILISIIDQRNTPMFDKS--SSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFR 278 + I F + E + K+ L + I GHTD + Sbjct: 200 DNLAADIRANPLILHFATGASTINLSNEQREKISKMVHYLDARPQASLISVGHTDNT--- 256 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 N +S +RA A L+++G+S RI SG +D NRR+ + Sbjct: 257 GSRSTNTTISANRAEFAKSYLVENGISSSRIES-SGKGPDEPIATNDTEEGKEQNRRVVV 315 Query: 337 LVE 339 ++ Sbjct: 316 TLK 318 >gi|242240116|ref|YP_002988297.1| outer membrane protein A [Dickeya dadantii Ech703] gi|242132173|gb|ACS86475.1| OmpA domain protein transmembrane region-containing protein [Dickeya dadantii Ech703] Length = 354 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L+ + + G TD + N LS Sbjct: 226 KSDVLFNFNKATLKPEGQRSLDQLYTQLSTIDPKDGSVVVLGFTDRL---GSDQYNQTLS 282 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ GV ++IS G A+ +A +RR++I Sbjct: 283 TKRAQSVVDYLVHKGVPANKISA-RGMGKANPVSGATCANVKARAALIDCLAPDRRVEIE 341 Query: 338 VED 340 V+ Sbjct: 342 VKG 344 >gi|229895607|ref|ZP_04510778.1| putative OMPA family outer membrane porin precursor [Yersinia pestis Pestoides A] gi|229701413|gb|EEO89441.1| putative OMPA family outer membrane porin precursor [Yersinia pestis Pestoides A] Length = 560 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 10/114 (8%) Query: 235 PMFDKSSSIPL-PETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 P+FD +S+ + L + + I I GH+D + + N LS R Sbjct: 440 PLFDSNSTKLKLNSQTNEMMMELLSLVERNKEKKILIVGHSDNT---GSSSMNMALSEQR 496 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 A + L+K ++ D G + NRR+++L+ Q Sbjct: 497 ALALRDWLIKRSDITVDNFIT-KGMGASEPVATNHTEAGREQNRRVEVLILPTQ 549 >gi|119094108|gb|ABL60938.1| flagellar motor protein MotB [uncultured marine bacterium HF10_19P19] Length = 110 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 8/91 (8%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNP--------FGKNLM 77 P +W +AD T+LMAFF+++ + K I Sbjct: 20 PPVGAPAWMATFADMATLLMAFFVLILSFAEFNVPKFKQISGSLRNAFGVQKVVPIVEQP 79 Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + + +P S + + Sbjct: 80 KGTTVLSLNFSPSPSKSVTNEMTQQTTQVNQ 110 >gi|22125427|ref|NP_668850.1| hypothetical protein y1530 [Yersinia pestis KIM 10] gi|45442357|ref|NP_993896.1| hypothetical protein YP_2580 [Yersinia pestis biovar Microtus str. 91001] gi|108808138|ref|YP_652054.1| hypothetical protein YPA_2144 [Yersinia pestis Antiqua] gi|108811590|ref|YP_647357.1| hypothetical protein YPN_1427 [Yersinia pestis Nepal516] gi|145599338|ref|YP_001163414.1| hypothetical protein YPDSF_2062 [Yersinia pestis Pestoides F] gi|149365180|ref|ZP_01887215.1| putative membrane protein [Yersinia pestis CA88-4125] gi|162421467|ref|YP_001607103.1| OmpA domain-containing protein [Yersinia pestis Angola] gi|165926917|ref|ZP_02222749.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939224|ref|ZP_02227774.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011145|ref|ZP_02232043.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212522|ref|ZP_02238557.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398614|ref|ZP_02304138.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421232|ref|ZP_02312985.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424634|ref|ZP_02316387.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467871|ref|ZP_02332575.1| OmpA domain protein [Yersinia pestis FV-1] gi|218930004|ref|YP_002347879.1| hypothetical protein YPO2953 [Yersinia pestis CO92] gi|229838541|ref|ZP_04458700.1| putative OMPA family outer membrane porin precursor [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899106|ref|ZP_04514249.1| putative OMPA family outer membrane porin precursor [Yersinia pestis biovar Orientalis str. India 195] gi|229901867|ref|ZP_04516988.1| putative OMPA family outer membrane porin precursor [Yersinia pestis Nepal516] gi|270490053|ref|ZP_06207127.1| OmpA family protein [Yersinia pestis KIM D27] gi|294504711|ref|YP_003568773.1| hypothetical protein YPZ3_2601 [Yersinia pestis Z176003] gi|21958316|gb|AAM85101.1|AE013756_2 hypothetical [Yersinia pestis KIM 10] gi|45437221|gb|AAS62773.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|108775238|gb|ABG17757.1| membrane protein [Yersinia pestis Nepal516] gi|108780051|gb|ABG14109.1| putative membrane protein [Yersinia pestis Antiqua] gi|115348615|emb|CAL21559.1| putative membrane protein [Yersinia pestis CO92] gi|145211034|gb|ABP40441.1| membrane protein [Yersinia pestis Pestoides F] gi|149291593|gb|EDM41667.1| putative membrane protein [Yersinia pestis CA88-4125] gi|162354282|gb|ABX88230.1| OmpA domain protein [Yersinia pestis Angola] gi|165912824|gb|EDR31451.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921268|gb|EDR38492.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989823|gb|EDR42124.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206453|gb|EDR50933.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960721|gb|EDR56742.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051118|gb|EDR62526.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056516|gb|EDR66285.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680763|gb|EEO76858.1| putative OMPA family outer membrane porin precursor [Yersinia pestis Nepal516] gi|229687508|gb|EEO79581.1| putative OMPA family outer membrane porin precursor [Yersinia pestis biovar Orientalis str. India 195] gi|229694907|gb|EEO84954.1| putative OMPA family outer membrane porin precursor [Yersinia pestis biovar Orientalis str. PEXU2] gi|262362773|gb|ACY59494.1| hypothetical protein YPD4_2587 [Yersinia pestis D106004] gi|262366698|gb|ACY63255.1| hypothetical protein YPD8_2582 [Yersinia pestis D182038] gi|270338557|gb|EFA49334.1| OmpA family protein [Yersinia pestis KIM D27] gi|294355170|gb|ADE65511.1| hypothetical protein YPZ3_2601 [Yersinia pestis Z176003] gi|320014496|gb|ADV98067.1| putative OMPA family outer membrane porinprecursor [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 560 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 10/114 (8%) Query: 235 PMFDKSSSIPL-PETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 P+FD +S+ + L + + I I GH+D + + N LS R Sbjct: 440 PLFDSNSTKLKLNSQTNEMMMELLSLVERNKEKKILIVGHSDNT---GSSSMNMALSEQR 496 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 A + L+K ++ D G + NRR+++L+ Q Sbjct: 497 ALALRDWLIKRSDITVDNFIT-KGMGASEPVATNHTEAGREQNRRVEVLILPTQ 549 >gi|146301688|ref|YP_001196279.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146156106|gb|ABQ06960.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 653 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + FD V L KI V+ ++ IR HTD+ + A+ N LS Sbjct: 539 NISMIYFDLGKWNITDAAAVELGKILAVMQEYPKMRIDIRSHTDSR---SSAKSNLVLSD 595 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 RA S L+ G+ R+ + G+ +L S+ + NRR + ++ Sbjct: 596 KRAKSIMAWLVSKGIDAKRL-RGKGYGESQLLNRCKDGVKCSEEEHLKNRRSEFMI 650 >gi|78358672|ref|YP_390121.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221077|gb|ABB40426.1| peptidoglycan-associated lipoprotein, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 177 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 N F+ E +L+ E L + + I G+ D N L R Sbjct: 71 NVVYFEFDKFDLKAEGKELLKGKAEALKAYPQLRVLIEGNCDER---GTQEYNLALGERR 127 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338 A +A++ L+ GV D++ +S + R ++ ++ + NRR + + Sbjct: 128 ARAAFEYLVLLGVRPDQLEIVS-YGEERPAVSGNNEAAWAKNRRAEFKL 175 >gi|303256189|ref|ZP_07342205.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderiales bacterium 1_1_47] gi|331001245|ref|ZP_08324871.1| peptidoglycan-associated lipoprotein [Parasutterella excrementihominis YIT 11859] gi|302860918|gb|EFL83993.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderiales bacterium 1_1_47] gi|329568972|gb|EGG50768.1| peptidoglycan-associated lipoprotein [Parasutterella excrementihominis YIT 11859] Length = 163 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S P+ + V+ + LA + + G+TD N L RA + Sbjct: 59 FDFDSYTVSPDQMPVVTNHAQFLAAHKNLNVRLEGNTDER---GGREYNLALGQKRAEAV 115 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 + + GVS +I IS + + K + NRR+DI Sbjct: 116 KERMTLLGVSPQQIETIS-YGKEKPKAEGHDEAAYYENRRVDI 157 >gi|255530025|ref|YP_003090397.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366] gi|255343009|gb|ACU02335.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366] Length = 585 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 60/160 (37%), Gaps = 18/160 (11%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++++ + I+ + N + + + I + +D + + Sbjct: 435 ERQVTNSPVLIAKEPTDPGTLNKKEFLQTKENNKPIRLE------NIYYDFNKWDIRADA 488 Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 L+K+ +++ ++ I + HTD+ N+ LS RA SA ++ G+ ++ Sbjct: 489 AAELEKLVQIMKDNSRIWIELGSHTDSR---GNDAYNFTLSQKRAESAVTYMISRGIEKN 545 Query: 308 RISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 RI G+ L ++ + NRR + + Sbjct: 546 RIEA-RGYGETLLLNRCANGIKCTEEEHQLNRRTEFKITA 584 >gi|171319658|ref|ZP_02908751.1| type IV / VI secretion system protein, DotU family [Burkholderia ambifaria MEX-5] gi|171095111|gb|EDT40119.1| type IV / VI secretion system protein, DotU family [Burkholderia ambifaria MEX-5] Length = 404 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 12/162 (7%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 A +R L LA+ + L VA V+ + + T L R MF + Sbjct: 250 KAPRRALPLDALARNLEQRLRDEVAAGNVELIRAPGSDTLTL------RFGGMFAPGDAA 303 Query: 244 PLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLM 300 P V+ G +A T + + G+ D++ R+ N LS RA Q+L+ Sbjct: 304 VAPWGASVVASAGREIAVLTNSATVHVAGYADSTSARSTRQASNQALSEARARHVAQILV 363 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + VS I + G + + NRR+++ + D Sbjct: 364 SADVSAPHI-SVEGNGDADSLADNGTAAGRARNRRVEVTITD 404 >gi|153837358|ref|ZP_01990025.1| putative protein F-related protein [Vibrio parahaemolyticus AQ3810] gi|308094490|ref|ZP_05889709.2| OmpA family protein [Vibrio parahaemolyticus AN-5034] gi|149749273|gb|EDM60052.1| putative protein F-related protein [Vibrio parahaemolyticus AQ3810] gi|308090642|gb|EFO40337.1| OmpA family protein [Vibrio parahaemolyticus AN-5034] Length = 225 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 72/192 (37%), Gaps = 12/192 (6%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 G L + + E + + + R + ++L + + + Sbjct: 43 GNMLDTAPKTNTELRHPEWGYASASHVSTAPRVNQTARAAEKKSNNVTSLEMFLDRHNIP 102 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272 ++I + +Q + F S+ + L+K+G LA T+V + GH Sbjct: 103 HETIG--GGHLMIRLKEQVH---FQTGSAQLSSNSQDWLRKLGHYLAGRTDVDVVIDGHA 157 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330 D++ A N LS RA + ++ S + R+ GF + + ++ + Sbjct: 158 DST---GAASFNDTLSEKRAREVEKQMLASSIPRQRVFS-RGFGEYVPQCSNATSSGKAC 213 Query: 331 NRRIDILVEDRQ 342 NRR+++++ + Sbjct: 214 NRRVELMLIVDE 225 >gi|71083303|ref|YP_266022.1| OmpA family protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062416|gb|AAZ21419.1| OmpA family [Candidatus Pelagibacter ubique HTCC1062] Length = 159 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 7/105 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + F + ++ + L+K L ++++ + GH D N L Sbjct: 52 PDRVFFATNETVLTTASRETLRKQAAWLRKNSDINVVLEGHADER---GTREYNLALGER 108 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 RA SA LM G+S +RI + + R ++ S NRR Sbjct: 109 RANSAKDYLMTYGISSERI-SVLSYGKERPVDSGSNPLAWSKNRR 152 >gi|261253024|ref|ZP_05945597.1| outer membrane protein [Vibrio orientalis CIP 102891] gi|260936415|gb|EEX92404.1| outer membrane protein [Vibrio orientalis CIP 102891] Length = 279 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ P+ + L + +L + +++ GH D+ N L++ RA Sbjct: 160 FAFNSTEINPKYMGHLAEASNILKQHPQFHLAVTGHADSV---GDVSYNQELAMGRAQQV 216 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + L G+S RI D NRR+ I V D + Sbjct: 217 KRYLTIFGLSPSRIQT-KSVGDTLPLYEGDSDGVRLTNRRVSIEVIDTE 264 >gi|17545455|ref|NP_518857.1| peptidoglycan-associated lipoprotein precursor [Ralstonia solanacearum GMI1000] gi|17427747|emb|CAD14266.1| probable peptidoglycan-associated lipoprotein precursor [Ralstonia solanacearum GMI1000] Length = 172 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + + FD S PE +L + L + I+G+TD + N L Sbjct: 67 KRSVYFDFDSYTVKPEYQGLLTQHARYLQSHNQRKVLIQGNTDER---GTSEYNLALGQK 123 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 RA + + L GV + ++ +S + + + + + NRR DI+ Sbjct: 124 RAEAVRRALSSLGVPDSQMESVS-LGKEKPQASGHDEESWAQNRRSDIV 171 >gi|94987344|ref|YP_595277.1| outer membrane protein [Lawsonia intracellularis PHE/MN1-00] gi|94731593|emb|CAJ54956.1| outer membrane protein [Lawsonia intracellularis PHE/MN1-00] Length = 340 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 41/104 (39%), Gaps = 8/104 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S +L++ ++ + + + G TD++ N RLS +RA + Sbjct: 239 FAFDSFALDDTAKAILEETVRLIRANPDFNVRLLGWTDST---GPDAYNLRLSQERADAV 295 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 L+K G+ +R+ G + + NRR +++ Sbjct: 296 KNFLVKMGIPSNRLFA-KGMGKSY-QYNNATKEGRYMNRRTELV 337 >gi|332995422|gb|AEF05477.1| OmpA/MotB [Alteromonas sp. SN2] Length = 393 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 8/111 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD SS+ + + E + T ++ GHT A N LS DRA Sbjct: 279 RVLFDNESSVVKAPRDPEISEFAEFMKQYTNTTAVIEGHTSA---PGSEAYNMDLSEDRA 335 Query: 293 YSAYQVLMK-SGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVED 340 S +V++ + R+ + G+ RL + + NRRI + V+D Sbjct: 336 ASFKEVMVDMYDIDASRLETV-GYGETRLLDTAKNAEAHRVNRRISVTVKD 385 >gi|323492645|ref|ZP_08097789.1| OmpA/MotB domain-containing protein [Vibrio brasiliensis LMG 20546] gi|323313020|gb|EGA66140.1| OmpA/MotB domain-containing protein [Vibrio brasiliensis LMG 20546] Length = 323 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 9/118 (7%) Query: 228 IIDQRNTPMFDKSSSIPLPET--IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + N FD S E Q+I +L E + + GHTDA A N Sbjct: 202 LQKPTNAIYFDTDSYAIDGEWVVEKKAQRIICLLRKYPESKVDLIGHTDAE---GTADYN 258 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 LS RA + LM +++++I + G + ++ + NRR+++ ++ Sbjct: 259 QNLSEHRAQAVANWLMTKDIAQEQI-SLQGVGDTQPASSNLTPESRALNRRVEMELKG 315 >gi|118593012|ref|ZP_01550399.1| hypothetical protein SIAM614_29626 [Stappia aggregata IAM 12614] gi|118434319|gb|EAV40973.1| hypothetical protein SIAM614_29626 [Stappia aggregata IAM 12614] Length = 192 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 8/156 (5%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 ++ + A ++ V + L S+ F S+ Sbjct: 36 QGAQQEVNISADELQKAAIENVEKYPGANSPQQLPLAAKLASLRQFNLEITFHFDSATIA 95 Query: 246 PETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P + + I + L + I GHTDA + N LS+ RA + L+ + Sbjct: 96 PASYETVGLIADALHTPYLQGQTFFIVGHTDA---KGTREYNLELSIKRAEAVRDALVTT 152 Query: 303 -GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 V + + + G +L+ S+P + NRR+ ++ Sbjct: 153 FQVPAEYLFAV-GLGEEQLRDPSNPDAAVNRRVQLI 187 >gi|91786415|ref|YP_547367.1| hypothetical protein Bpro_0505 [Polaromonas sp. JS666] gi|91695640|gb|ABE42469.1| OmpA/MotB [Polaromonas sp. JS666] Length = 220 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 10/178 (5%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 ++ F+ L ++ M L+ +K +A + T R + Sbjct: 25 MSGLLGAFVLILVGVLVVQMDLMANLEAEVQKRRVEEQRRIALEKALAIPLATGRVTLNN 84 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI----SIRGHTDASPF---RN 279 I + +F +S P+ ++L+ + L + G TD P Sbjct: 85 GRIGISGSVLFPLNSDQLRPDGRLLLKSLVPPLQVYLGERDELLMVSGFTDDKPIQEGNQ 144 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRID 335 DN LS RA + + L++ G+ R + F + ++ + + NRR++ Sbjct: 145 RFADNLALSAQRALTVTRALIEEGMPSSRAFAAA-FGAEQPVASNTDEKGRALNRRVE 201 >gi|317503691|ref|ZP_07961708.1| OmpA family protein [Prevotella salivae DSM 15606] gi|315665212|gb|EFV04862.1| OmpA family protein [Prevotella salivae DSM 15606] Length = 683 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 5/98 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I+ + +D + + PE+ L + +L + I I H D +R A N Sbjct: 511 ITAPVLIDNIFYDFNKATLRPESTAALDDLVALLNENPHVTIEISAHCD---YRGSAEYN 567 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 RLS RA + + L+ G+S DR++ + G+ R K+ Sbjct: 568 LRLSQQRAENVVRYLISKGISADRLTAV-GYGKQRPKV 604 >gi|170738630|ref|YP_001767285.1| peptidoglycan-associated lipoprotein [Methylobacterium sp. 4-46] gi|168192904|gb|ACA14851.1| peptidoglycan-associated lipoprotein [Methylobacterium sp. 4-46] Length = 168 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 + F+ S+ L K + L+ I GH D N+ L R Sbjct: 58 DRVFFETDSTDLTATATATLDKQAQWLSRYPRYTFLIEGHADER---GTREYNFSLGARR 114 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRRIDILVEDRQG 343 + + L G++ R+ +S + R +D S NRR +++ G Sbjct: 115 SQAVRDYLTSRGIAASRMRTVS-YGKERPVAVCNDISCWSQNRRAVTVLDGGAG 167 >gi|114766590|ref|ZP_01445546.1| OmpA family protein [Pelagibaca bermudensis HTCC2601] gi|114541206|gb|EAU44258.1| OmpA family protein [Roseovarius sp. HTCC2601] Length = 194 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 10/103 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F P+ L++ + + I GHTDA N RLS +RA + Sbjct: 97 FATDKYYISPKGKARLEEFFN--SATAFGFIIAGHTDAR---ASIEYNRRLSYNRANAVA 151 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + G + RI + G+ + + + NRR++IL Sbjct: 152 S--VARG-TGARIIDVRGYGEEYPVATNRTVEGMAKNRRVEIL 191 >gi|332993983|gb|AEF04038.1| sodium-type flagellar protein MotY [Alteromonas sp. SN2] Length = 292 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 8/107 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAY 293 + K+S+ + L IGE L +++ + G+TD+ +N +LS+ RA Sbjct: 187 SYQKNSTELTKYSQKRLTMIGEYLKEDSDLELVLLDGYTDSY---GGRWNNEQLSIRRAN 243 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 L GV +DRI +++G R +D + NRR+ + + Sbjct: 244 EVKSYLTTIGVPDDRI-QLTGHGEKRHIANNDTRESRAQNRRVVVRL 289 >gi|163747526|ref|ZP_02154876.1| OmpA family protein [Oceanibulbus indolifex HEL-45] gi|161379204|gb|EDQ03623.1| OmpA family protein [Oceanibulbus indolifex HEL-45] Length = 191 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + L + + I GHTD+ N RLS +RA S Sbjct: 93 FFATDKYNISAQGRARLANFFQSTGAVS--YIITGHTDSR---ASDAYNMRLSYNRANSV 147 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 V + G RI+ + G+ + ++ + NRR++I+ Sbjct: 148 AHVANQVG---ARIADVRGYGERMPAVPNNSAANMAKNRRVEII 188 >gi|317048541|ref|YP_004116189.1| DotU family type IV / VI secretion system protein [Pantoea sp. At-9b] gi|316950158|gb|ADU69633.1| type IV / VI secretion system protein, DotU family [Pantoea sp. At-9b] Length = 404 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 3/105 (2%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +F ++ +L + + + + +TD SP ++ S RA + Sbjct: 287 LFAADGTVVNQVGRALLAHVASAMKTVKGTVLVSVYTDNSPVDGRFVSSYEFSFARARAI 346 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 Q+L ++E K G + +D + NRR++I + Sbjct: 347 AQLLNPQ-LAEGHSVKAEGRGDSNPLLPNDSNENRARNRRVEITL 390 >gi|37704672|gb|AAR01608.1| OprF [Pseudomonas sp. MFY245] Length = 314 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ + ++ + + + + + GHT Sbjct: 208 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKENSYGDIKNLADFMKQYPSTTTTVEGHT 267 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 268 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 314 >gi|73542264|ref|YP_296784.1| OmpA/MotB [Ralstonia eutropha JMP134] gi|72119677|gb|AAZ61940.1| OmpA/MotB [Ralstonia eutropha JMP134] Length = 218 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 15/118 (12%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ PE L + L T + I GHTD+ + N RLS+ RA S Sbjct: 102 LFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSF---GSDKYNDRLSIRRAES 158 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPM----NSANRRIDILVEDRQ 342 L+ GV +R+ G +LK+ + NRR+++ V + Sbjct: 159 VKAYLVSKGVEANRVYT-EGKGKRQLKVDPKSCKGNRTAQIACQQPNRRVEVEVVGTR 215 >gi|260900780|ref|ZP_05909175.1| outer membrane protein [Vibrio parahaemolyticus AQ4037] gi|308108014|gb|EFO45554.1| outer membrane protein [Vibrio parahaemolyticus AQ4037] Length = 205 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 9/114 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 +F S P ++++ + L I ++G+ + + N LS RA Sbjct: 82 RVLFANDSDEINPVFAKQIRELSDFLKEYPSTSIELQGYASRT---GGSEHNLDLSKRRA 138 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDRQG 343 + + L+++G++ DR+ I G+ + + NRR+ V +G Sbjct: 139 ENVRKALLQNGIAPDRV-TIVGYGDTV-LATTGTDEVSHALNRRVTATVVGHKG 190 >gi|238897411|ref|YP_002923088.1| pal protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465166|gb|ACQ66940.1| pal protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 173 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 7/126 (5%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTD 273 V R I + + + FD P +L + L + + + I GHTD Sbjct: 51 VSSADERARAQIEGLQKTSVVYFDFDKYNIKPNFAEILNAHADFLLNNPSFKVDIEGHTD 110 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSAN 331 + N L RA + L GVS ++S +S + + + S N Sbjct: 111 Q---SGTSEYNMALGERRANAVKMYLQGKGVSAQQMSIVS-YGKEKPVYRGNNKEDYSQN 166 Query: 332 RRIDIL 337 RR ++ Sbjct: 167 RRAVLI 172 >gi|170720302|ref|YP_001747990.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619] gi|169758305|gb|ACA71621.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 324 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F L I + L I + GH+D N S RA + Sbjct: 179 FPGGGIDLDAAARARLDVILDYLQADPTVNHIELNGHSDN---SGNRLTNRDTSRRRALA 235 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 L GV E++I + ++ + NRR++I ++ Sbjct: 236 VADYLKAHGVPEEQI-TVRFHGERYPLAKNNSAANRARNRRVNIELDR 282 >gi|145298281|ref|YP_001141122.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida A449] gi|1332434|emb|CAA63036.1| outer membrane protein [Aeromonas salmonicida] gi|142851053|gb|ABO89374.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida A449] gi|1588798|prf||2209353A major outer membrane protein OmpAI Length = 339 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 42/125 (33%), Gaps = 18/125 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 + +F E + L + + + + G+TD N +LS Sbjct: 215 NSDVLFAFGKDSLKAEGVEALNSLYQQIVDFQPKDGSAVVVGYTDRI---GSDAYNQKLS 271 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337 RA + L+ G++ ++ + G + D + + +RR++I Sbjct: 272 EARARTVANFLVSKGMAASKV-AVEGRGEANPVTGNKCDGVKAKAQLISCLAPDRRVEIR 330 Query: 338 VEDRQ 342 V Q Sbjct: 331 VSGVQ 335 >gi|126741160|ref|ZP_01756841.1| OmpA/MotB domain protein [Roseobacter sp. SK209-2-6] gi|126717797|gb|EBA14518.1| OmpA/MotB domain protein [Roseobacter sp. SK209-2-6] Length = 140 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 6/105 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 FD S+ + L + + T I GHTD+ A+ N RLSL RA Sbjct: 36 QISFDFDSATLRSDQKPKLANMCTSMKAMTGTVFQIIGHTDS---SGSAKYNERLSLLRA 92 Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + L+ S GV+E+ + I G +DP NRR++ Sbjct: 93 QEVRRHLISSCGVAENSLRAI-GMGETAPFNQNDPRADENRRVEF 136 >gi|170749438|ref|YP_001755698.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170655960|gb|ACB25015.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831] Length = 269 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 8/108 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDR 291 F S+ PE + L+ +GE L I GHTDA N RLSL R Sbjct: 118 VFFAYDSARLTPEARIQLEPLGEALRAQPLAGHAFLIAGHTDA---AGGRAYNRRLSLAR 174 Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 A + L++ G++ +R+ ++ G+ R K P++ NRR+++ + Sbjct: 175 ARAVKAHLVETYGLAPERL-RVHGWGPARPKDPDAPLSRVNRRVEVSL 221 >gi|59714347|ref|YP_207122.1| outer membrane porin F [Vibrio fischeri ES114] gi|197336792|ref|YP_002158803.1| outer membrane porin F [Vibrio fischeri MJ11] gi|59482595|gb|AAW88234.1| outer membrane porin F [Vibrio fischeri ES114] gi|197314044|gb|ACH63493.1| outer membrane porin F [Vibrio fischeri MJ11] Length = 202 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 7/111 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F SS P ++ + E L E I ++G A N RLS RA + Sbjct: 81 LFANDSSEISPIFKTEIRTMAEFLEEYPETSIQLQGFASQQ---GNAEYNIRLSELRAAA 137 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 L++ GV RI I GF L D ++ NRR+ V +G Sbjct: 138 VRVALIEYGVDPQRIETI-GFGDTLLTAKGDSAVSHALNRRVVATVVGFKG 187 >gi|57505872|ref|ZP_00371797.1| probable periplasmic protein Cj0599 [Campylobacter upsaliensis RM3195] gi|57015902|gb|EAL52691.1| probable periplasmic protein Cj0599 [Campylobacter upsaliensis RM3195] Length = 313 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 106/326 (32%), Gaps = 47/326 (14%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83 + W I YAD M L+ F+ + +I A + +NL T + Sbjct: 2 KNNKEEGNFW-IAYADLMAGLL--FIFILLIGAI-VVKYVLTQSDLKIIKENLNTQEANL 57 Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 + + LS + + T N+++L Q Sbjct: 58 ELSKQALKDKESIVFQLSKELNATANTLNLI----------------------HTQKTEL 95 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 +N+++ S+ K+ D + I + K K K + I L Sbjct: 96 ENNISTLSKDLKNNIDEKDRQILILLNQIELKEKELKAIQQDFKEAKERVENLSFIRENL 155 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK--------- 254 S + + + + + I + +FDK S I E + L+K Sbjct: 156 SKELQKKLDENISIDQKTGAISL-----PAEVLFDKDSFILKDEAKISLKKILSGYLTGI 210 Query: 255 -IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--DRISK 311 E ++ + E I I GHTD+ N LS RAY + E ++ Sbjct: 211 LDDENISKNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMSFIYSFYKDERLQKLLM 267 Query: 312 ISGFAHHRLKIASDPMN-SANRRIDI 336 SG + + + + +RRI+I Sbjct: 268 ASGRSFSVPILKNGVEDKDLSRRIEI 293 >gi|46200841|ref|ZP_00207866.1| COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Magnetospirillum magnetotacticum MS-1] Length = 342 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + FD + PE VLQ+ + + HTD A+ N LS Sbjct: 235 KNYIVFFDFDKAQITPEAARVLQQAAGAAKTAGAARIDLSAHTD---LSGSAKYNQALSE 291 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 R + L + G+ +I + + + NRR++I++ Sbjct: 292 KRGAAVKAQLEQLGIPASQIV-VVAKGKSSPMVPTPDGVREPQNRRVEIVL 341 >gi|303248654|ref|ZP_07334908.1| peptidoglycan-associated lipoprotein [Desulfovibrio fructosovorans JJ] gi|302489910|gb|EFL49836.1| peptidoglycan-associated lipoprotein [Desulfovibrio fructosovorans JJ] Length = 171 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS E+ +L + E++ ++ + G+ D A N L RA +A Sbjct: 69 FAFDSSNLTAESRQILTRKAEIMRQYPQIKVIVEGNCDQR---GTAEYNLALGERRAQAA 125 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 Q L G+ DR+S +S + R + NRR + Sbjct: 126 AQYLSNLGIPADRLSTVS-YGKERPLDPGHSEAAYAKNRRDEF 167 >gi|118581722|ref|YP_902972.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM 2379] gi|118504432|gb|ABL00915.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379] Length = 180 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 8/165 (4%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 S E + A + V+ E T ++ + F Sbjct: 18 ASNEVVKAEEPVVAPAQTEAPAVEVTQPAAPAAPVEAPKVEETAKADSEAVAAAFDVAYF 77 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 D S + L K +++ + + I GH D A N L RA SA Sbjct: 78 DFDKSDLRQDARDALSKNADIMLKTNTAANVKIEGHCDER---GSAEYNMALGERRAKSA 134 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338 Q L+ GV R+S +S + + ++ + NRR + +V Sbjct: 135 LQYLLTLGVPSQRLSIVS-YGEEKPAAQGGNEEAWAKNRRTEFVV 178 >gi|94497343|ref|ZP_01303914.1| OmpA/MotB [Sphingomonas sp. SKA58] gi|94423206|gb|EAT08236.1| OmpA/MotB [Sphingomonas sp. SKA58] Length = 358 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F+ S P+ +L + + + GH D A N LS Sbjct: 247 PYIVFFEWDKSDITPDAATILDNAVSAYSSCGSAQVMLAGHADK---SGSASYNVGLSQR 303 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 RA S L G+ + + F R ++ + NRR++I Sbjct: 304 RADSVKAYLASKGIPDG-VMTTEAFGESRPRVETADGVREVQNRRVEIT 351 >gi|296282332|ref|ZP_06860330.1| putative outer membrane lipoprotein [Citromicrobium bathyomarinum JL354] Length = 238 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F++SS+ +P + +L ++ + +++I GHTD + N LS DRA Sbjct: 123 FEESSAEFIPGSEELLDELATAMRPCVGAIVAISGHTDT---SGSPKVNLALSQDRAQMV 179 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + L++ G+ + +GF R P + ANRRI+ V Sbjct: 180 RRELIERGIPGQNLIA-NGFGSSRPVEGLSPADPANRRIEFRVVS 223 >gi|114765941|ref|ZP_01444955.1| OmpA/MotB domain protein [Pelagibaca bermudensis HTCC2601] gi|114541755|gb|EAU44793.1| OmpA/MotB domain protein [Roseovarius sp. HTCC2601] Length = 248 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 67/234 (28%), Gaps = 18/234 (7%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 K + S + + +L + S E S Sbjct: 27 QRQKQVFEEAETSGLGQTRGLKLITVQDVTAESAAPEVAATEPAAPSAPELQQTAPQVAT 86 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + + +R D + + + S +F + Sbjct: 87 TAPELAAPSGSGQGVSISASSDSAPQRPADPNRPLLAAASDAPM-------VFGQLAPEL 139 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARD 283 +++ + F S+ + LQ + L A I I GHTD+ Sbjct: 140 QVNLHIE-----FGFDSAAISDDQKPKLQTVCMALMAADVGKIRIVGHTDS---AGSDAY 191 Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 N LS+ RA + L++ G+ R+ + G ++P NRR++ Sbjct: 192 NETLSVLRAKEVARNLIEECGLPPSRLETV-GMGERFPFNEANPRADENRRVEF 244 >gi|262377497|ref|ZP_06070719.1| outer membrane protein [Acinetobacter lwoffii SH145] gi|262307553|gb|EEY88694.1| outer membrane protein [Acinetobacter lwoffii SH145] Length = 352 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L I GHTD + N RLSL RA Sbjct: 235 RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIEGHTDNT---GPRALNERLSLARA 291 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S L+ + V R+S GFA + ++ NRR+ + + Sbjct: 292 NSVKSSLVNEYNVDASRLST-QGFAWDQPIADNNTKEGRAMNRRVFATITGSR 343 >gi|92113977|ref|YP_573905.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043] gi|91797067|gb|ABE59206.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043] Length = 177 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 36/109 (33%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 ++ T F PE VL E L + GH D N L Sbjct: 71 EQRTIYFAFDRDTIRPEFESVLSAHAEYLQSHPNTNVVLEGHADER---GTREYNLGLGE 127 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 RA + Q L GVS +I +S + R + + NRR+ Sbjct: 128 RRARAVEQYLTVEGVSASQIEIVS-YGEERPAVRGHDEESYAQNRRVVF 175 >gi|77464239|ref|YP_353743.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1] gi|126463081|ref|YP_001044195.1| OmpA domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|221640123|ref|YP_002526385.1| OmpA domain-containing protein [Rhodobacter sphaeroides KD131] gi|332559128|ref|ZP_08413450.1| OmpA domain protein precursor [Rhodobacter sphaeroides WS8N] gi|77388657|gb|ABA79842.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1] gi|126104745|gb|ABN77423.1| OmpA domain protein [Rhodobacter sphaeroides ATCC 17029] gi|221160904|gb|ACM01884.1| OmpA domain protein precursor [Rhodobacter sphaeroides KD131] gi|332276840|gb|EGJ22155.1| OmpA domain protein precursor [Rhodobacter sphaeroides WS8N] Length = 182 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 33/104 (31%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F S L + L + + I I GH D N L R Sbjct: 72 DRVFFTVDQSTLNDAARATLDTQSQWLMSNADYAIIIEGHADEQ---GTREYNLALGARR 128 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 A + L+ G++ R+ +S + R S NRR Sbjct: 129 ASAVQDYLISKGIAPSRMKTVS-YGKERPVEVCSTEACYSKNRR 171 >gi|262038728|ref|ZP_06012088.1| OmpA/MotB domain-containing protein [Leptotrichia goodfellowii F0264] gi|261747280|gb|EEY34759.1| OmpA/MotB domain-containing protein [Leptotrichia goodfellowii F0264] Length = 362 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294 F +P L I V+ + +I GHTD++ N +LS+ RA + Sbjct: 246 FKVDGRVPNQAEAKDLGTIANVINQFADGGTIDFVGHTDST---GSNAYNQKLSVARAQN 302 Query: 295 AYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 ++L + G+ I+G + ++ + NRR+++ ++ Sbjct: 303 VARLLREYGLKNSISYGTITGKGESQPADTNNTVQGRYNNRRVELFFQN 351 >gi|149915621|ref|ZP_01904147.1| peptidoglycan-associated lipoprotein [Roseobacter sp. AzwK-3b] gi|149810513|gb|EDM70356.1| peptidoglycan-associated lipoprotein [Roseobacter sp. AzwK-3b] Length = 171 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F S E VL + L + + ++ GH D N L R Sbjct: 61 DRVLFAVDQSTLSSEAQAVLDGQAQWLMTNIDYSAVIEGHADEQ---GTREYNLALGARR 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + + L+ G++ +R+ +S + R +++ + NRR Sbjct: 118 ANAVQEYLVSRGIAGNRLKVVS-YGKERPIELCSNEACYAKNRR 160 >gi|152995560|ref|YP_001340395.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1] gi|150836484|gb|ABR70460.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1] Length = 296 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 75/298 (25%), Gaps = 22/298 (7%) Query: 48 FLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107 FL+ + T AI Y + + S IF + + + Sbjct: 13 FLLAIGMPFT---QANAITHYQSGISDSEWLLSGDIFSCSLTHPVPNYGEGHFIKEAGEP 69 Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 + Q + + + + + + + Sbjct: 70 MKFILQPQNEKLGPGQVYIISQAPDWSPGLKPETLEVLPYPGYGLTVEVGGRVAERMLT- 128 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 L + + + + +S+ + + + I Sbjct: 129 ------SLDRGRHPVVAGTAWENNRETIEVGLSNINFAPAYNEFRRCLSSLLPVNYDQI- 181 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNW 285 R +F + L + ++ E I I GHTD RDN Sbjct: 182 ---ARTAALFPTNGVNLTDRIKARLDLVALYVSSDPSVEYIYIDGHTD---VIGSRRDNR 235 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS RA L++ GV +I ++ NRR+ I +E Sbjct: 236 ELSKVRAEKVTSYLLEKGVPAGKIIS-RYHGERYPSTTNNTAQGRERNRRVTIRLEKS 292 >gi|78186498|ref|YP_374541.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins-like [Chlorobium luteolum DSM 273] gi|78166400|gb|ABB23498.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins-like protein [Chlorobium luteolum DSM 273] Length = 154 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 FD S + + L+ + A+ ++ + + GH D N L R Sbjct: 49 GDVFFDFDQSALRMDAVSQLKNNAAWMDANRSKRVIVEGHCDER---GTNEYNMALGERR 105 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A SA + ++ G+S +RI +S + + +++ + NRR Sbjct: 106 ASSAKEYIVSLGISPERIETLS-YGEEKPFAQGSTEEAWAQNRR 148 >gi|325285434|ref|YP_004261224.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324320888|gb|ADY28353.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 645 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q +T FD + P+ + +QK+ + I + HTD+ N LS Sbjct: 532 QLSTIYFDLNKFDIRPDAEIEIQKVIVAMEKFPSLKIKVNSHTDSR---GKDSYNLWLSQ 588 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-------PMNSANRRIDILV 338 RA + ++ G+ R+ + GF +L + + NRR + ++ Sbjct: 589 KRAEATVNYMISKGIDASRL-QGEGFGETKLVNKCENGVPCTVKEHQLNRRSEFII 643 >gi|119471346|ref|ZP_01613818.1| hypothetical protein ATW7_16907 [Alteromonadales bacterium TW-7] gi|119445622|gb|EAW26906.1| hypothetical protein ATW7_16907 [Alteromonadales bacterium TW-7] Length = 1559 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 12/117 (10%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEV----LAHSTE-VISIRGHTDASPFRNIAR 282 + D F +S + + + E L + +++ GHT Sbjct: 552 VKDVVIEGTFSLNSEQVTDDYRNTILQQSEAVIKALKQNESLKVTVAGHTCDI---GNYD 608 Query: 283 DNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 N LS RA + +L+ ++G+ E RI ++ G + + I + + + NRR+ I Sbjct: 609 YNMALSERRAEAVKHILVTQAGIDEARI-EVLGLGYAQPLINNKDEASRAQNRRVHI 664 >gi|302877290|ref|YP_003845854.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans ES-2] gi|302580079|gb|ADL54090.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2] Length = 217 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 7/88 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIG---EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 +FD + PE VL + L T + I GH D R N RLS RA Sbjct: 99 LFDFDRAEVKPEGKTVLDEKIVTGMKLHTDTGPLLIIGHADRI---GSERYNQRLSERRA 155 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRL 320 + L++ GV R+ + G Sbjct: 156 NAVRDYLVEQGVGAQRL-SVQGKGESEP 182 >gi|167581046|ref|ZP_02373920.1| OmpA family protein [Burkholderia thailandensis TXDOH] Length = 200 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD +I P L ++ + + + G+TD + N RLSL RA + Sbjct: 77 LFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 133 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +++ G + N RR+++ V Q Sbjct: 134 VKSYLVSKGVPANKVYT-EGKGKRNPITGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 190 >gi|58422905|gb|AAW73252.1| OmpA [Salmonella sp. CDC 156-87] Length = 226 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 7/96 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 118 KSDVLFNFNKSTLKPEGQQALDQLYNQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 174 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 RA S L+ G+ D+IS G + Sbjct: 175 EKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGN 209 >gi|294140555|ref|YP_003556533.1| sodium-type flagellar protein MotY [Shewanella violacea DSS12] gi|293327024|dbj|BAJ01755.1| sodium-type flagellar protein MotY [Shewanella violacea DSS12] Length = 289 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 ++ S + + K+ E LA E++ I +TD+ N ++S RA S Sbjct: 184 YESGGSELTRFSKSQIAKVQEYLAYDSEVELVLIDAYTDSY---GGRSINQKVSEQRADS 240 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + +G+++DRI + G R ++ NRR+ I + Sbjct: 241 VKNFFLSAGINQDRIYTV-GHGERRHVASNATIDERGRNRRVVIRISKP 288 >gi|258545495|ref|ZP_05705729.1| outer membrane protein A (outer membrane protein II) [Cardiobacterium hominis ATCC 15826] gi|258519195|gb|EEV88054.1| outer membrane protein A (outer membrane protein II) [Cardiobacterium hominis ATCC 15826] Length = 324 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 22/148 (14%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTE---VI 266 + + L+ + + +F S PE LQ+I A + VI Sbjct: 179 PRLEQNRNCSPELVQQYNIDVSALFKFDRSDYASILPEGKRQLQEIAAAAAQYRDATSVI 238 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--- 323 I G+TD N RLS RA + +V++++G + G + + Sbjct: 239 YIDGYTDPE---GKPAYNQRLSQRRAQTVKRVMIENGFPAASLKA-RGHGENDPVVTGCR 294 Query: 324 -----SDPMNSA----NRRIDILVEDRQ 342 + +A NRR++I + + Sbjct: 295 KRNPRNASARAACDQPNRRVEIKLYGKN 322 >gi|160898923|ref|YP_001564505.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1] gi|160364507|gb|ABX36120.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1] Length = 168 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 7/107 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +F S+ + + ++G L E + + GHTD N RLSL R Sbjct: 65 GKLLFGFDSAEVGAQARTKVLELGRALKGVGIERLRVEGHTDDR---GSDAYNMRLSLRR 121 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 A + VL ++G++ I ++ G + SD + NRR+ I+V Sbjct: 122 AEAVADVLAEAGLARQDI-EVKGLGRAMPVVPSD--AAENRRVAIVV 165 >gi|299067718|emb|CBJ38927.1| Peptidoglycan-associated lipoprotein, protein pal, component of tol-pal system [Ralstonia solanacearum CMR15] Length = 171 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + + FD S PE +L + L + I+G+TD + N L Sbjct: 66 KRSVYFDFDSYAVKPEYQGLLTQHAHYLQSHNQRKVLIQGNTDER---GTSEYNLALGQK 122 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 RA + + L GV + ++ +S + + + + + NRR DI+ Sbjct: 123 RAEAVRRALSSLGVPDSQMESVS-LGKEKPQASGHDEESWAQNRRSDIV 170 >gi|217970135|ref|YP_002355369.1| OmpA/MotB domain protein [Thauera sp. MZ1T] gi|217507462|gb|ACK54473.1| OmpA/MotB domain protein [Thauera sp. MZ1T] Length = 232 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 16/121 (13%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD ++ E L ++ + + GHTD N RLS RA Sbjct: 116 DALFDFDKAVLKAEGKAKLDQLAAQAKSLKLEVILAVGHTDRL---GSNTYNQRLSERRA 172 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDILVEDR 341 + L+ GV +R+ G + + +A +RR+++ V Sbjct: 173 AAVKTYLVSKGVDANRVYT-EGKGETQPVTGNKCDKVGGRAAQISCLQPDRRVEVEVIGS 231 Query: 342 Q 342 + Sbjct: 232 K 232 >gi|78061495|ref|YP_371403.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383] gi|77969380|gb|ABB10759.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 169 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD P+ ++++IG L + + + G++D + + + LS R Sbjct: 62 GPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDQE---GVDKYDLELSRRR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A L+ G+ RI I G + + NRR I+V R Sbjct: 119 AEVVALELVDVGLDTKRI-AIVGKGKSDPVGDNKTPGGRAQNRRAAIVVSPR 169 >gi|186896079|ref|YP_001873191.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis PB1/+] gi|186699105|gb|ACC89734.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+] Length = 560 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 10/114 (8%) Query: 235 PMFDKSSSIPL--PETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 P+FD +S+ +T ++ ++ ++ + I GH+D + + N LS R Sbjct: 440 PLFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHSDNT---GSSSMNMTLSEQR 496 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 A + L+K ++ D G + NRR+++L+ Q Sbjct: 497 ALALRDWLIKRSDITVDNFIT-KGMGASEPVATNHTEAGREQNRRVEVLILPTQ 549 >gi|171058626|ref|YP_001790975.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6] gi|170776071|gb|ACB34210.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6] Length = 196 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290 FD S + V++ + L + I GHTD N L Sbjct: 90 PRVVYFDFDSYVVKDTYRPVIEANAKYLGVDRKRQMLIEGHTDER---GGREYNLALGQR 146 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 RA + + L GV + + +S + R + + + NRR ++ Sbjct: 147 RAEAVVRALALLGVPDSQTEAVS-YGEERPAASGADEAAWAKNRRAEL 193 >gi|163746609|ref|ZP_02153967.1| Outer membrane protein, OmpA/MotB family [Oceanibulbus indolifex HEL-45] gi|161380494|gb|EDQ04905.1| Outer membrane protein, OmpA/MotB family [Oceanibulbus indolifex HEL-45] Length = 639 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 72/235 (30%), Gaps = 13/235 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 I + +++ + + + N + +S + + D Sbjct: 400 IRRPGDEVQTQTFDDGSTRTIVTKNDGSRIETIRSRDGTVLRRTNFDAQGREYILVDDLV 459 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGI 224 + LP + + + + L + + + L + V + Sbjct: 460 EEREVIVNDLPQVQETQQAQRASVQDEAALRQALQAELRSDQGRTFSLRQVREIREVRSL 519 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRN 279 + + + F S+ PE L IG L VI + GHTDA Sbjct: 520 APEL--ELDAVRFPTGSAAIQPEQARALANIGSTLRDMIANDPRTVILVEGHTDAV---G 574 Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333 A N LS RA + L + V + G+ +L++ + ANRR Sbjct: 575 DAGYNLALSDRRAETVALALTEYFDVPPANLIT-QGYGESQLRVPTTTAEPANRR 628 >gi|51596997|ref|YP_071188.1| OMPA family outer membrane porin [Yersinia pseudotuberculosis IP 32953] gi|51590279|emb|CAH21916.1| putative OMPA family outer membrane porin [Yersinia pseudotuberculosis IP 32953] Length = 560 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 10/114 (8%) Query: 235 PMFDKSSSIPL--PETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 P+FD +S+ +T ++ ++ ++ + I GH+D + + N LS R Sbjct: 440 PLFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHSDNT---GSSSMNMTLSEQR 496 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 A + L+K ++ D G + NRR+++L+ Q Sbjct: 497 ALALRDWLIKRSDITVDNFIT-KGMGASEPVATNHTEAGREQNRRVEVLILPTQ 549 >gi|153947393|ref|YP_001400334.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP 31758] gi|170023708|ref|YP_001720213.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis YPIII] gi|152958888|gb|ABS46349.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758] gi|169750242|gb|ACA67760.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII] Length = 560 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 10/114 (8%) Query: 235 PMFDKSSSIPL--PETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 P+FD +S+ +T ++ ++ ++ + I GH+D + + N LS R Sbjct: 440 PLFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHSDNT---GSSSMNMTLSEQR 496 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 A + L+K ++ D G + NRR+++L+ Q Sbjct: 497 ALALRDWLIKRSDITVDNFIT-KGMGASEPVATNHTEAGREQNRRVEVLILPTQ 549 >gi|260574834|ref|ZP_05842836.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] gi|259022839|gb|EEW26133.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] Length = 190 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +F S+ L + + +I GHTD+ N RLS RA S Sbjct: 91 LFATDSATLTAHGRSFLTQFFQ--QAGAFGYAIYGHTDSR---ASDEYNMRLSQRRAASV 145 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 + G +R GF + ++ + NRR++++ Sbjct: 146 ANIARSVGAVVER---EIGFGERQPIASNGSASGMQQNRRVEVV 186 >gi|170727083|ref|YP_001761109.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908] gi|169812430|gb|ACA87014.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908] Length = 289 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 46/109 (42%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294 ++ + K+ E L++ EV + I +TD+ N ++S +RA S Sbjct: 184 YEFGGKELTRYAKAQIAKVQEYLSYDPEVELVLIDAYTDSY---GGRSINQKISEERADS 240 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + + +G++++RI + G ++ + NRR+ I + Sbjct: 241 VKEFFISAGITQERIHTV-GHGERHHVASNATIDERARNRRVVIRITKP 288 >gi|83950613|ref|ZP_00959346.1| OmpA domain protein [Roseovarius nubinhibens ISM] gi|83838512|gb|EAP77808.1| OmpA domain protein [Roseovarius nubinhibens ISM] Length = 641 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 85/304 (27%), Gaps = 21/304 (6%) Query: 51 MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110 + + ++ + + ++ + PP + + ++ Sbjct: 312 LIALQGIEEKSFDDVVGGLETALPDVFALHAVL-----PPPPTDAEVVIPEFVATLSPEG 366 Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 + G K + +++ +S + + S + Sbjct: 367 LVQLRGRLGSDKLRETVDSFARARFSSAGVHTKARVVEGLPADWPVRVLAGLESLSYLEN 426 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISS--------TLSGLVADNIVKGVLFETTRT 222 + P S + K ++ ++ + + + T Sbjct: 427 GAVTVTPDSIDVTGNTGNKDASAQISGFLAETLGERGQFEIDVTYQEVLDPIAALPTPEE 486 Query: 223 GI-LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280 + I +I F+ S +L I E+L E+ I G+TD+ Sbjct: 487 CVSKIQLIVAERKINFEPGSDKLDSNGAAILDDIAEILKKCGEIKLEIAGYTDSQ---GR 543 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 N +LS +RA + L V + G+ + +D NRRI+ + Sbjct: 544 ESMNQQLSENRARAVLDGLRMRRVITSTYEAV-GYGENDPIADNDSDEGREANRRIEFHL 602 Query: 339 EDRQ 342 + Sbjct: 603 IKPE 606 >gi|330864159|emb|CBX74225.1| hypothetical protein YEW_BY08350 [Yersinia enterocolitica W22703] Length = 206 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 8/134 (5%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVIS 267 ++ + + + + + PMFD +S P +L H + Sbjct: 67 LLNRINQQIESYQDIPAFSSTQMAPMFDSNSIKLKPNAQTNETLASLLLLVEQHQGRKVL 126 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 I GH+D + A N +S RA L+K+ I G ++D Sbjct: 127 IIGHSDNT---GSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVASNDTP 183 Query: 328 NS--ANRRIDILVE 339 NRR+++L+ Sbjct: 184 AGQDQNRRVEVLLL 197 >gi|310815074|ref|YP_003963038.1| OmpA domain protein [Ketogulonicigenium vulgare Y25] gi|308753809|gb|ADO41738.1| OmpA domain protein [Ketogulonicigenium vulgare Y25] Length = 708 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 84/307 (27%), Gaps = 16/307 (5%) Query: 49 LVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + + +A + I + + + E + + + Sbjct: 312 VRLIAGSAMNQSVFDGIVGRVENSLPATFSFTAELPPPPTEAEAGAPPPPQFYVTLNTEG 371 Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 ++ + + ++ +++ + + +N Sbjct: 372 QAILTGRLADDLLNTSAGNFARAYFGASNVIMATRVLPDGLPQGWSTRVLTGIESLSHLN 431 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI---- 224 P + + I+ V + G+ Sbjct: 432 NGSVLITPDTITVRGETGEVNASNTISQFLINKLGQNANFTVDVDYLEALDPIAGLPTPG 491 Query: 225 ----LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFR 278 + ++ N FD S+ ++ V+ + +VL I + G+TD+ Sbjct: 492 ECVAQLGALNDENKIAFDPGSAQIAGSSLRVIDAMADVLRGCPVDLPIRVAGYTDSQ--- 548 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 A N RLS DRA + L V + + GF ++D NRRI Sbjct: 549 GRAEMNLRLSQDRADAVLAALRMRRVPVSSFTAV-GFGAADPIASNDSEEGREANRRIAF 607 Query: 337 LVEDRQG 343 + + +G Sbjct: 608 SLIEEEG 614 >gi|167911995|ref|ZP_02499086.1| OmpA family protein [Burkholderia pseudomallei 112] gi|254203932|ref|ZP_04910292.1| OmpA family protein [Burkholderia mallei FMH] gi|254295613|ref|ZP_04963071.1| ompA family protein [Burkholderia pseudomallei 406e] gi|147745444|gb|EDK52524.1| OmpA family protein [Burkholderia mallei FMH] gi|157805511|gb|EDO82681.1| ompA family protein [Burkholderia pseudomallei 406e] Length = 200 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ P L ++ + + + G+TD + N RLSL RA + Sbjct: 77 LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 133 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +++ G + N RR+++ V Q Sbjct: 134 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 190 >gi|83309701|ref|YP_419965.1| Outer membrane protein and related peptidoglycan-associated protein [Magnetospirillum magneticum AMB-1] gi|82944542|dbj|BAE49406.1| Outer membrane protein and related peptidoglycan-associated protein [Magnetospirillum magneticum AMB-1] Length = 378 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + FD + PE VLQ+ + + HTD A+ N LS Sbjct: 271 KNYIVFFDFDKAQITPEAARVLQQAAGAAKTAGAARIDLSAHTD---LSGSAKYNQALSE 327 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 R + L + G+ +I + + + NRR++I++ Sbjct: 328 KRGAAVKAQLEQLGIPASQIV-VVAKGKTSPMVPTPDGVREPQNRRVEIIL 377 >gi|330502404|ref|YP_004379273.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] gi|328916690|gb|AEB57521.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] Length = 217 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 63/170 (37%), Gaps = 11/170 (6%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 K+++ Q + L FE ++++ Sbjct: 19 AGSEKKEVAKPAAMPAPQVTRAWLDEYEPKLREAVKGSQFEFERRENLLVVT---APVQG 75 Query: 236 MFDKSS-SIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAY 293 F+ + LP ++ + ++ ++L ++ + GH D+ A N LS RA Sbjct: 76 SFNPDRPHMLLPASLGPITRVAKLLETDEDIAVVVLGHADS---SGDAALNRDLSQQRAR 132 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + + SG+ + R+ ++ G + A+D NRR++IL+ R Sbjct: 133 AVTSIFRLSGLKQSRL-QVMGLGSDMPRAANDSAAGRALNRRVEILLTSR 181 >gi|289661910|ref|ZP_06483491.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667001|ref|ZP_06488076.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 172 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD PE ++ + L I+++G+TD N L Sbjct: 63 RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNTDER---GSREYNMGLGE 119 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337 R + L +G S +++ +S + R + + S NRR++I+ Sbjct: 120 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTESGESCWSQNRRVEIV 168 >gi|323138982|ref|ZP_08074042.1| peptidoglycan-associated lipoprotein [Methylocystis sp. ATCC 49242] gi|322395736|gb|EFX98277.1| peptidoglycan-associated lipoprotein [Methylocystis sp. ATCC 49242] Length = 179 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 34/104 (32%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ S+ L K E L ++ GH D N+ L R Sbjct: 70 DRIFFETDSTDLTSTAQATLDKQAEWLNRYGRYSFTVEGHADER---GTREYNFALGARR 126 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A L+ GVS RI +S + R S NRR Sbjct: 127 AEVTKNYLISKGVSGSRIRTVS-YGKERPVAVCDDISCWSQNRR 169 >gi|319953905|ref|YP_004165172.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319422565|gb|ADV49674.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 645 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q +T FD + P+ V +QK+ + I + HTD+ N LS Sbjct: 532 QLSTIYFDLNKYNIRPDAEVEIQKVIAAMEKYPSLKIKVNSHTDSR---GKDAYNLWLSQ 588 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDP-----MNSANRRIDILVED 340 RA S ++ G+S DR+ + GF +L ++ + NRR + ++ + Sbjct: 589 KRAESTVGYMVSKGISADRL-EGEGFGETKLVNGCGNNSKCSSKEHDLNRRSEFIIRE 645 >gi|114771185|ref|ZP_01448605.1| OmpA/MotB family protein [alpha proteobacterium HTCC2255] gi|114548110|gb|EAU50997.1| OmpA/MotB family protein [alpha proteobacterium HTCC2255] Length = 163 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 +T +F S E +L K E L ++ I+I GH D + N L R Sbjct: 53 DTVLFLVDQSSLTAEATDLLNKQAEWLLNNPNKSITIEGHADET---GTREYNLALGARR 109 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A S L+ G+++ RI+ ++ F R + + S NRR Sbjct: 110 AASVQNYLVSRGLTDSRINTVT-FGKERPLAICSDEACWSKNRR 152 >gi|107025698|ref|YP_623209.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116693120|ref|YP_838653.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia HI2424] gi|105895072|gb|ABF78236.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116651120|gb|ABK11760.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424] Length = 170 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD P+ ++++IG L + + + G++D A + LS R Sbjct: 63 GPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDE---GTAAYDAELSRRR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A L+ G+ RI I G + + NRR I+V R Sbjct: 120 AEVVAVELVDVGLDAKRI-AIVGKGKLDPVGDNRTPAGRAQNRRAAIVVSPR 170 >gi|92118969|ref|YP_578698.1| OmpA/MotB [Nitrobacter hamburgensis X14] gi|91801863|gb|ABE64238.1| OmpA/MotB [Nitrobacter hamburgensis X14] Length = 164 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + P+ I L+K L +I GH D N L R Sbjct: 56 DRVFFESDQTNLSPQAITTLEKQARWLQTYNRYSFTIEGHADER---GTREYNIALGARR 112 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A + L G++ R+ IS + R +D S NRR Sbjct: 113 AQTVRSFLASRGINPSRMRTIS-YGKERPVAVCNDISCWSQNRR 155 >gi|323499085|ref|ZP_08104065.1| outer membrane protein [Vibrio sinaloensis DSM 21326] gi|323315920|gb|EGA68951.1| outer membrane protein [Vibrio sinaloensis DSM 21326] Length = 278 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 77/259 (29%), Gaps = 16/259 (6%) Query: 95 QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS---EHCKNSLTRDS 151 + I +G + + + + + K L Sbjct: 11 IASVASIIGCSSYPEQGSGGLGENYIQSNFTPVMPDEPLGPEHGLRFDWQLAKLHLDALI 70 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 +G C + ++I K+ + A + ++ L V Sbjct: 71 REGARWCFPAAVVQAIEKQNRIARELEGGLLLDAANDIVIQRKRLNELELQL-DYVTSQA 129 Query: 212 VKGVLFETTRTGILISIIDQRNTPM-----FDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 + +++IDQ + F +S+ P+ + L K +L Sbjct: 130 RCVPPVDEGAFHQRLAVIDQLFNLLNIDNQFAFNSAEINPKYMGHLAKAANILTEHPSLA 189 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 +S+ GH D+ N L++DRA + L G+S RI S + Sbjct: 190 LSVTGHADSV---GDIEYNQNLAMDRAQQVKRYLSIFGLSPTRIETHS-VGDTLPLYEGE 245 Query: 326 PMNSA--NRRIDILVEDRQ 342 NRR+ I V D Q Sbjct: 246 SEGVRLTNRRVSIEVVDTQ 264 >gi|313828793|gb|EFS66507.1| OmpA family protein [Propionibacterium acnes HL063PA2] Length = 115 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287 D + +FD S + P ++ + + L + I + G+TD+ A N L Sbjct: 4 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 60 Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 S RA S +VL + G++ +G ++D NRR+ I V++ Sbjct: 61 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 114 >gi|37704608|gb|AAR01576.1| OprF [Pseudomonas sp. MFY52] gi|37704630|gb|AAR01587.1| OprF [Pseudomonas sp. MFY76] Length = 316 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ + ++ + + + + + GHT Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKTNSYGDIKNLADFMKQYPSTTTTVEGHT 269 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSV-GYGESRPVA 316 >gi|99080027|ref|YP_612181.1| OmpA/MotB [Ruegeria sp. TM1040] gi|99036307|gb|ABF62919.1| OmpA/MotB [Ruegeria sp. TM1040] Length = 192 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 8/108 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + S LQ+ + + T + GHTD+ N LS RA + Sbjct: 91 FFPTNGSTVNAAGRKRLQEWFQSVMPGTRSFVVAGHTDSR---ASDEYNMALSQRRADAV 147 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 Q+ G RI + + ++ + + NRR++I R Sbjct: 148 AQIGRSVG---ARIKDVRAYGERSPRVPNRGAANLAQNRRVEIYCIRR 192 >gi|329944220|ref|ZP_08292479.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328530950|gb|EGF57806.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 462 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLD 290 F S + VL + E + ++I GHTD N LS Sbjct: 176 GDVTFAVDSDQLSAQADSVLAGVVEQIKKYPSGGELTITGHTDDV---ADDAHNQDLSER 232 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 RA + L +SG ++ +D ANRR+++ ++ + Sbjct: 233 RAKAVSGRLKTLTDLSAWKEAVSGKGESSPRVPNDSEENKQANRRVEVTLKPSK 286 >gi|148977050|ref|ZP_01813696.1| protein F-related protein [Vibrionales bacterium SWAT-3] gi|145963710|gb|EDK28971.1| protein F-related protein [Vibrionales bacterium SWAT-3] Length = 210 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 F S+ P P L +G L+ ++ + GHTD + R N LS Sbjct: 101 EQHVNFKTGSAFPEPAYNQWLDTLGSYLSQRQDIDIVIEGHTDNT---GTDRINDPLSEQ 157 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA L + VS I GF + + NRR+++++ Sbjct: 158 RAKEVKARLESNYVSSRSIYT-RGFGEYVPACTNASPQGKACNRRVELML 206 >gi|239820234|ref|YP_002947419.1| OmpA/MotB domain protein [Variovorax paradoxus S110] gi|239805087|gb|ACS22153.1| OmpA/MotB domain protein [Variovorax paradoxus S110] Length = 276 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 16/116 (13%) Query: 234 TPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 +F PE L + + + I + G+TD N LSL Sbjct: 162 DGLFRFDGRSLADLLPEGRRKLDALAGDIKA-ADAIKVTGYTDRL---GSQAYNSALSLA 217 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMNSA-------NRRIDILV 338 RA + L+++GV +I ++ G K+ + +A NRR++I V Sbjct: 218 RANTVRDYLVQAGVPAQKI-QVQGKGESEPKVQCTQTARAALIDCLAPNRRVEIEV 272 >gi|126728387|ref|ZP_01744203.1| OmpA/MotB family protein [Sagittula stellata E-37] gi|126711352|gb|EBA10402.1| OmpA/MotB family protein [Sagittula stellata E-37] Length = 168 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F S PE VL + L +++ +++ GH D N L R Sbjct: 57 DRVLFAVDQSSLSPEARTVLDGQAQWLMTNSDYMAVIEGHADEQ---GTREYNLALGARR 113 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 A + + L+ GVS+ R+ +S + R + NRR Sbjct: 114 ANAVMEYLVSRGVSQSRLKFVS-YGKERPIEICSEEACYAKNRR 156 >gi|117925108|ref|YP_865725.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1] gi|117608864|gb|ABK44319.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1] Length = 322 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 92/306 (30%), Gaps = 27/306 (8%) Query: 47 FFLVMWII--------NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKI 98 FL M + + ++ K Q+ G N ++ + + P + + Sbjct: 24 LFLSMAAVISCMAVVSASQAEEAYKGWIQWHPQTGPNTISTAGTQYYPYQPSPKPACEHG 83 Query: 99 DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158 + + D ++ + + N + Sbjct: 84 MDAAGNCVGDADGDGVTDGKDKCPGTPAQYAVDAVGCSLDRDGDGVNDAMDRCPDSRKGV 143 Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK----- 213 K ++ +++ + K ++ K + G++ + Sbjct: 144 KVDARGCELDDDQDGVVNSDDKCPGTSVHVKVDATGCEISKDGDMDGVLNEQDACLDTPK 203 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHT 272 G+ + SI F+ S + + VL + + ++GHT Sbjct: 204 GLPVGKNGCWSVNSIH-------FNTGSWELDAKALSVLNAAVATMKQHAAIRVEVQGHT 256 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSA 330 D+ N +LSL RA S + K G++ DR + F +L + + Sbjct: 257 DSR---ADDTFNKKLSLKRAESVIWYMTKQGLARDRFVAAA-FGEQKLLNSEKNSDERLV 312 Query: 331 NRRIDI 336 NRR+++ Sbjct: 313 NRRVEL 318 >gi|86160063|ref|YP_466848.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85776574|gb|ABC83411.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter dehalogenans 2CP-C] Length = 412 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 34/272 (12%), Positives = 69/272 (25%), Gaps = 16/272 (5%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P + + G Q P+ D + + + + Sbjct: 151 PDLDDRCPEAPGPATLQGCPDADGDGVGDAEDACPAEAGPAETLGCPPAKDSDGDGIPDE 210 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 I + + D D + E+ Sbjct: 211 IDRCPLDPEDADGFQEEDGCPDPDDDGDGIVDRVDACPHEQGPLENRGCPVMDADGDGVA 270 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 D VA + I++ + + LP + V Sbjct: 271 DPDDRCP-----EQAGVAADGCPRAYRLLEVGRDRIALREPVRFG----ARDDLLPSSAV 321 Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L ++ + L +++ HTD A + RLS RA + L G+ +R+ Sbjct: 322 LLDELAQALRDRPRLRVAVEVHTD---GAGDAAASKRLSQARAEAVRAALAGRGIEGERV 378 Query: 310 SKISGFAHHRLKIASDPM--NSANRRIDILVE 339 G ++ + NRR ++ + Sbjct: 379 EA-RGIGAEHPIASNKTARGRAQNRRTEVRIL 409 >gi|32491160|ref|NP_871414.1| hypothetical protein WGLp411 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166367|dbj|BAC24557.1| pal [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 170 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 Q N FD + E +L + L ++ + GH D + N L Sbjct: 64 QNNIVYFDLDKYVVKDEFTQILDAHSDFLKNNPSYKIVIEGHADER---GTSEYNIALGE 120 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337 RA S L GV +D++ + + + + + NRR+ + Sbjct: 121 RRAKSVKIYLQSKGVLDDQMK-VISYGKEKPAILGHDETTYAKNRRVVLT 169 >gi|255536190|ref|YP_003096561.1| OmpA [Flavobacteriaceae bacterium 3519-10] gi|255342386|gb|ACU08499.1| OmpA [Flavobacteriaceae bacterium 3519-10] Length = 474 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 73/270 (27%), Gaps = 23/270 (8%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N N AS + +R +D T + + ++ Sbjct: 209 NSTIANFWQASASLLFRFGNTDRDKDGILDKDDLCPDTPGLAEFQGCPDTDGDGVPDKDD 268 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 ++ ++ C T ++ + + Sbjct: 269 QCPDVAGPVENNGCPWPDTDGDGVVDKDDACPEVAGPAENNGCPWPDTDGDGILDKDDAC 328 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + LA+ + L + +F+ + PE+ Sbjct: 329 PTVPGLAQYNGCPKPQEAWADDATKAL----------------DNILFNFDKATIRPESK 372 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L +++ S I GHTD + N +LS RA + L GV++ + Sbjct: 373 EKLDAAAQIIKDSQGKFLIIGHTDK---KGAESYNLKLSQRRAGAVVDALEARGVADSSL 429 Query: 310 SKISGFAH---HRLKIASDPMNSANRRIDI 336 + G + AS+ +R++ + Sbjct: 430 KSM-GVGEQDATVPETASNAERLKDRKVVV 458 >gi|71907621|ref|YP_285208.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71847242|gb|AAZ46738.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 195 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 8/172 (4%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 S + + L + L V + E + Sbjct: 28 PSADGGQSAVVVRDPAGEVLLNQPYAAVKRRLDSNVGYQSSPEEVRERYANVLAAQPARP 87 Query: 232 RNTPM-FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289 R+ + F+ +I E+ L I + +A + + GHTD N +LSL Sbjct: 88 RSYVLYFEAGGNILTQESKAALVNIRKEIAERAASEVMVIGHTDRV---GSVEGNDKLSL 144 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 RA +L++SG+S +++ + G + + NRR++I V Sbjct: 145 QRAEGLRDLLIESGISAEKMEAV-GRGERDPLVPTADEVDEPKNRRVEINVR 195 >gi|330814653|ref|YP_004362828.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3] gi|327374645|gb|AEA65996.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3] Length = 421 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 9/166 (5%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 +E A + + + + ++ L + V +++ R M+ Sbjct: 260 RELRHADQSAQASSPIDRLGAALGEQLRDEIAAGNVELIKDTAADTVTL---RFNGMYAS 316 Query: 240 SSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAY 296 P V+ +G +A S + I G+TD P + N LS RA Sbjct: 317 GDVTVAPWWASVMASVGRAIASSPATTHVLITGYTDNLPASPAHQGSNHALSTARAQQVA 376 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340 Q+ +GV ++RI + G + + + NRR+++ V + Sbjct: 377 QIFAVAGVPKERI-SVVGQSDADPLADNVSKEGRARNRRVEVTVSN 421 >gi|225075662|ref|ZP_03718861.1| hypothetical protein NEIFLAOT_00678 [Neisseria flavescens NRL30031/H210] gi|224953084|gb|EEG34293.1| hypothetical protein NEIFLAOT_00678 [Neisseria flavescens NRL30031/H210] Length = 219 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 42/134 (31%), Gaps = 8/134 (5%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + L + E I + + + F S+ L + Sbjct: 92 YMDYQEKKLRQSLANTNIEVERQGNQIKLVMPENVT---FATGSAALSGHAQSALSAAAQ 148 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + +I GHTD + N LS +RA S L GVS R+S G+ Sbjct: 149 TLVQYPDTTLTINGHTDNT---GNDAINEPLSRNRAESVAIFLQSRGVSSTRLSTF-GYG 204 Query: 317 HHRLKIASDPMNSA 330 + ++ + Sbjct: 205 SRQPIASNATVEGR 218 >gi|152985175|ref|YP_001347005.1| outer membrane protein [Pseudomonas aeruginosa PA7] gi|150960333|gb|ABR82358.1| probable outer membrane protein [Pseudomonas aeruginosa PA7] Length = 321 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F + L I ++L + I GH+D N LS RA + Sbjct: 178 FPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L +GV E +I+ + + +A++ + NRR+ + + Sbjct: 235 VQEYLKGNGVPESQIN-VRFYGERYPLVANNSAANRARNRRVTVHLAR 281 >gi|330830247|ref|YP_004393199.1| sodium-type flagellar protein MotY [Aeromonas veronii B565] gi|328805383|gb|AEB50582.1| Sodium-type flagellar protein MotY [Aeromonas veronii B565] Length = 277 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 9/111 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 +DK+S + L I E + + + ++D+ N +LS RA + Sbjct: 170 YDKNSDQLSIPSKRRLAMISEFIKADKGIDVVVIDAYSDSY---GGRWPNLKLSEKRADA 226 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 +V + G+ +I + G + +++ + NRR+ I R G Sbjct: 227 IKKVFVDLGIDPGKI-SVEGHGEKQHVASNETEQGRAKNRRVVIS-MGRNG 275 >gi|221134115|ref|ZP_03560420.1| putative outer membrane adhesin like proteiin [Glaciecola sp. HTCC2999] Length = 2282 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 10/109 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +F +SS + + K+ + + + GHTDA + N LS RA Sbjct: 2170 LFAINSSQLTSNDKLEVMKLATFMQTYPDTSVVIEGHTDAR---GTDKYNQWLSQQRAAV 2226 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRI--DILV 338 ++L+ ++ +RI I GF +L I + + NRR +I + Sbjct: 2227 VGKLLINQHNIAPERIETI-GFGETQLLIDATTEAQHALNRRTIAEITI 2274 >gi|315125307|ref|YP_004067310.1| outer membrane protein; signal peptide [Pseudoalteromonas sp. SM9913] gi|315013820|gb|ADT67158.1| putative outer membrane protein; signal peptide [Pseudoalteromonas sp. SM9913] Length = 354 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + S + + + ++ L + + GHT A A N LS RA + Sbjct: 244 FPNNDSSVSQQYLNDIDEVATFLKEYPDTTVLLEGHTSAV---GKASYNKWLSKKRADAV 300 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 + L+ G++EDRI+ G RLK ++ ++ NRR++ V+ Sbjct: 301 AKKLIADGIAEDRITTA-GLGEERLKNEANTAKAHAENRRVEAHVKS 346 >gi|258543922|ref|ZP_05704156.1| lipoprotein PlpD [Cardiobacterium hominis ATCC 15826] gi|258520861|gb|EEV89720.1| lipoprotein PlpD [Cardiobacterium hominis ATCC 15826] Length = 256 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDR 291 +F ++ PE L + + + +R G TD A N LS R Sbjct: 140 DALFAFDTATLRPEADRALADLLAKVRAHGDTGEVRVDGFTDRL---GSATYNRELSQAR 196 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA-------NRRIDILVED 340 A + L++ G++ RI + +G + A +RR+++ V Sbjct: 197 ADAVKNYLVRGGIAASRI-RAAGLGSSQPLAHCADSLPRGELIACLQPDRRVEVTVSS 253 >gi|21232447|ref|NP_638364.1| outer membrane protein P6 precursor [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767470|ref|YP_242232.1| outer membrane protein P6 precursor [Xanthomonas campestris pv. campestris str. 8004] gi|188990576|ref|YP_001902586.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv. campestris str. B100] gi|21114228|gb|AAM42288.1| outer membrane protein P6 precursor [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572802|gb|AAY48212.1| outer membrane protein P6 precursor [Xanthomonas campestris pv. campestris str. 8004] gi|167732336|emb|CAP50528.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv. campestris] Length = 172 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD PE ++ + L I+++G+ D N L Sbjct: 63 RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 119 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 R + L +G S +++ +S + R S NRR++I+ Sbjct: 120 RRGNAVSSALQAAGGSASQLTVVS-YGEERPVCTETSESCWSQNRRVEIV 168 >gi|315186730|gb|EFU20488.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578] Length = 826 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 81/255 (31%), Gaps = 23/255 (9%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 V +K + + ++ + ++ + K + S D E Sbjct: 578 DTVPPEVSVKTEPVPFSPDGDGRDEVVAFIPEVRDESGIESWELVIANKDRKQTFSEDGE 637 Query: 165 KSINKEENYFLPPLSKEKILAMKRKK-RLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + F + + DL ++ + +V D V G Sbjct: 638 PPARIVWDGFFESGDLAEQAHDYPVAFTVTDLGGNVAKASALVVTD-----VYVVIKDGG 692 Query: 224 ILISIIDQRNTPMFDKSSS-----IPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277 IS+ D P F + E + L ++ +L + + GH + + Sbjct: 693 AYISVPDIHFAP-FTADYTDKVPSEIREENLRTLDEVAAMLKKFPQYTVQLEGHAVSLLW 751 Query: 278 RNIARDNWR-------LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 + R LS RA + + L+ GV R+ I G+ R + + Sbjct: 752 FDPERAKVEHQEVLVPLSRARAEAVRKALISRGVDPSRL-SIVGYGGSRPIVPFSDLKKR 810 Query: 331 --NRRIDILVEDRQG 343 NRR++ L++++ G Sbjct: 811 WVNRRVEFLLKEKSG 825 >gi|313802740|gb|EFS43958.1| OmpA family protein [Propionibacterium acnes HL110PA2] Length = 368 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287 D + +FD S + P ++ + + L + I + G+TD+ A N L Sbjct: 257 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 313 Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 S RA S +VL + G++ +G ++D NRR+ I V++ Sbjct: 314 SRRRAASGAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 367 >gi|156976618|ref|YP_001447524.1| hypothetical protein VIBHAR_05392 [Vibrio harveyi ATCC BAA-1116] gi|156528212|gb|ABU73297.1| hypothetical protein VIBHAR_05392 [Vibrio harveyi ATCC BAA-1116] Length = 207 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 67/157 (42%), Gaps = 10/157 (6%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + KK +S + N + + ++I + +Q + F S+ L ++ Sbjct: 58 AQVPSSMEKKSQGVMSLEMFLNRHQIAHETISGEHLMIRLKEQVH---FQTGSARLLAQS 114 Query: 249 IVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 +Q +G LA T+V + GH D++ A N LS RA + L+ + + Sbjct: 115 QDWIQSLGHYLAGRTDVDVVIDGHADST---GAASFNDSLSEKRAREVEKQLLATSLPRQ 171 Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 R+ GF + + ++ + NRR+++++ Q Sbjct: 172 RVFS-RGFGEYVPQCSNATASGKACNRRVELMLIVDQ 207 >gi|295688124|ref|YP_003591817.1| peptidoglycan-associated lipoprotein [Caulobacter segnis ATCC 21756] gi|295430027|gb|ADG09199.1| peptidoglycan-associated lipoprotein [Caulobacter segnis ATCC 21756] Length = 184 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 7/112 (6%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 + +++ + FD + VL + L + I G+ D Sbjct: 66 VQDFVVNVGDRVYFDTDEYSVRADGQPVLAGQAQWLNRYPSVKVRIEGNADER---GTRE 122 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANR 332 N L RA + L+ GVS RI IS F + A + NR Sbjct: 123 YNLALGARRANAVRDFLIAQGVSASRIETIS-FGKEKPIDAGSTEEAWAKNR 173 >gi|255535532|ref|YP_003095903.1| membrane-bound proton-translocating pyrophosphatase [Flavobacteriaceae bacterium 3519-10] gi|255341728|gb|ACU07841.1| Pyrophosphate-energized proton pump [Flavobacteriaceae bacterium 3519-10] Length = 912 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P L + E++ I + G+TD + A N +LS RA + Sbjct: 808 FQSGSSDLKPGAENALANLAEIMNDHPNVRIKLGGYTDDT---GNADTNLKLSNLRAQTT 864 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK-IASDPMN--SANRRIDILVED 340 L++ G++ DRI G+ A+D + NRRID+ V Sbjct: 865 KLKLLEMGIAADRIET-EGYGPLFPVCEANDTDECKAQNRRIDVRVLS 911 >gi|86146732|ref|ZP_01065053.1| putative protein F-related protein [Vibrio sp. MED222] gi|85835579|gb|EAQ53716.1| putative protein F-related protein [Vibrio sp. MED222] Length = 197 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ P P L +G L+ ++ + GHTD + R N LS RA Sbjct: 93 FKTGSTSPEPAYNNWLDTLGSYLSRRQDIDVVIEGHTDNT---GSDRVNDPLSEQRAKEV 149 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L + VS R GF + + NRR+++++ Sbjct: 150 KARLESNYVS-SRAIYTRGFGEYVPACNNASAQGKACNRRVELML 193 >gi|94309657|ref|YP_582867.1| OmpA/MotB [Cupriavidus metallidurans CH34] gi|93353509|gb|ABF07598.1| outer membrane protein or related peptidoglycan-associated (lipo)protein [Cupriavidus metallidurans CH34] Length = 217 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 15/118 (12%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ PE L + L T + I GHTD+ + N RLS+ RA S Sbjct: 101 LFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSF---GSDKYNDRLSIRRAES 157 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPM----NSANRRIDILVEDRQ 342 L+ GV +R+ G +LK+ + NRR+++ V + Sbjct: 158 VKAYLVSKGVEANRVYT-EGKGKRQLKVDPKSCKGNRTAQIACQQPNRRVEVEVVGTR 214 >gi|239628950|ref|ZP_04671981.1| chemotaxis motB protein [Clostridiales bacterium 1_7_47_FAA] gi|239519096|gb|EEQ58962.1| chemotaxis motB protein [Clostridiales bacterium 1_7_47FAA] Length = 277 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 74/217 (34%), Gaps = 20/217 (9%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 NI L + + + ++ N EE+ +P S + Sbjct: 38 NISKLEEIASAMQRQLGIEAQTDIEDVPQDLKYPVIGENNEESTQVPTGS------QNTQ 91 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +++A + ++N+ V I +N +FD S+ ++ Sbjct: 92 ASAREMALMARDIQTYFDSENLDAIVSNSENAVFIRF-----KNDLLFDPDSASLRADSK 146 Query: 250 VVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 +L +G +L + I I GHT + N ++ LS +RA + L G Sbjct: 147 SMLDAVGIMLKEKQDNILAVYINGHT--AQAANSLINDRLLSSERADNVAIYLEDQVGFD 204 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 ++ G+ + + NRR+D+++ Sbjct: 205 PKKLI-CRGYGKYYPIADNATREGREQNRRVDMIILG 240 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 64/213 (30%), Gaps = 11/213 (5%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 W YAD +T+++ FF++++ I+ + + I + Sbjct: 2 KRQKDEEGGQEWLNTYADMITLVLTFFVLLYSISNVNISKLEEIASAMQ---------RQ 52 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 + Q E Q+ I E+ +++ Q + + Sbjct: 53 LGIEAQTDIEDVPQDLKYPVIGENNEESTQVPTGSQNTQASAREMALMARDIQTYFDSEN 112 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 ++ +SE + DL + + + M ++K+ LA I+ Sbjct: 113 LD--AIVSNSENAVFIRFKNDLLFDPDSASLRADSKSMLDAVGIMLKEKQDNILAVYING 170 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + I +L + I + DQ Sbjct: 171 HTAQAANSLINDRLLSSERADNVAIYLEDQVGF 203 >gi|254463477|ref|ZP_05076893.1| OmpA family protein [Rhodobacterales bacterium HTCC2083] gi|206680066|gb|EDZ44553.1| OmpA family protein [Rhodobacteraceae bacterium HTCC2083] Length = 211 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S L S I GHTD+ N RLS +RA + Sbjct: 113 FFSTNSHHISRSGQQHLMNFFRSSKASA--YIIAGHTDSR---ASDEYNMRLSYNRATTV 167 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 + +G R++ + G+ ++ S NRR++I+ Sbjct: 168 ANIARSAG---ARVADVRGYGERMPVASNKSQVGMSKNRRVEII 208 >gi|82523887|emb|CAI78610.1| peptidoglycan-associated lipoprotein [uncultured delta proteobacterium] Length = 184 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 52/169 (30%), Gaps = 16/169 (9%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + ++RL+ L + ++ + I I Sbjct: 23 GACTKKEVAVEDPTMTSQNGEQERLKQLEAERAAQAKAETEAMRLAKSEMLEKFKNIDIY 82 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 F+ S E ++L++ L+ ++ + +I GH D + N Sbjct: 83 ---------FEFDKSSLTEEAKLILKEKALFLSANSAKNTTIEGHCDER---GTSEYNLA 130 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333 L RA + L G+S RI S + ++ + NRR Sbjct: 131 LGDRRAKNVKTYLQGLGISGQRIITTS-YGEEMPVDTGHNETAWAKNRR 178 >gi|332669626|ref|YP_004452634.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484] gi|332338664|gb|AEE45247.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484] Length = 517 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 31/264 (11%), Positives = 71/264 (26%), Gaps = 22/264 (8%) Query: 87 QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146 +N + +E + + ++ + + + Sbjct: 91 ENLSSPGPSGVRLVDTEEGVVRPVARDELDRAVMSGNSTPGGPATDAGDEAADGDEVVYA 150 Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 + G+ + + P +L + ++ + Sbjct: 151 AFAAPDAGRVDVMLPQGGW----VADVPVVPADDAGVLTVPPEELAEGGVADAPVVPLEA 206 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 + + V T + + + +F S + PE L + Sbjct: 207 YTEVVGGTVRARQTPEAVTVQVASD---VLFAVDSDLLGPEAEAALAAAAAQVTAYPGGT 263 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK----SGVSEDRISKISGFAHHRLK 321 +++ GHTD N LS RA + L + SG + + Sbjct: 264 LTVVGHTDDV---ADDAYNLDLSQRRAATVAARLAQVADLSGFD----VTVDAKGESQPA 316 Query: 322 IASDP--MNSANRRIDILVEDRQG 343 +A + NRR++I++ QG Sbjct: 317 VAGTSPDARALNRRVEIVLV-PQG 339 >gi|327485675|gb|AEA80081.1| Protein F-like protein [Vibrio cholerae LMA3894-4] Length = 182 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 61/153 (39%), Gaps = 10/153 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPLP 246 ++ + + +++ + +L + ++ +I NT F+ S+ Sbjct: 27 QKNTSVMPNAMTQPRSASYEDLRQYLLSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSM 86 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L + LA + + + GHTD + + N +L+ RA + L++S V Sbjct: 87 ASKQWLDTVARFLATESGIDIVLEGHTDNT---GSEKLNDKLAERRANAVKAALVQSRVV 143 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++ I GF + + + NRR++I Sbjct: 144 QNAIYT-RGFGENVPACTNSTKNGRACNRRVEI 175 >gi|304410057|ref|ZP_07391676.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|307302230|ref|ZP_07581988.1| OmpA/MotB domain protein [Shewanella baltica BA175] gi|304351466|gb|EFM15865.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|306914268|gb|EFN44689.1| OmpA/MotB domain protein [Shewanella baltica BA175] Length = 196 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ + + L + LA + +++ GHTD N++LSL RA + Sbjct: 91 VYFEFAIAEVDFSQWKTLALVKAYLAANDVALTLVGHTD---IVGTPEFNYQLSLQRAQN 147 Query: 295 AYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 ++L++ G + +R + G + NRR+ +V ++ Sbjct: 148 VKRILVEDYGFNPNRF-TVMGKGISEPVADNRSSEGRSLNRRVQFIVNNK 196 >gi|148475218|dbj|BAF63175.1| major outer membrane protein ompAII [Aeromonas veronii] Length = 332 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 26/128 (20%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289 + +F S PE + L + + + + G+TD N +LS Sbjct: 209 SDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRI---GSDAYNQKLSE 265 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---------------RRI 334 RA + L+ G+ ++ I G N RR+ Sbjct: 266 ARARTVADFLVGKGLPAGKV-AIEGRGEANPV----TGTQCNSVKGKAQLISCLAPDRRV 320 Query: 335 DILVEDRQ 342 ++ V Q Sbjct: 321 EVRVTGVQ 328 >gi|262375579|ref|ZP_06068812.1| peptidoglycan-associated lipoprotein [Acinetobacter lwoffii SH145] gi|262309833|gb|EEY90963.1| peptidoglycan-associated lipoprotein [Acinetobacter lwoffii SH145] Length = 190 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ E + LQ + L + +++ GHTD N L RA + Sbjct: 82 FDYDSTELSNEDLNTLQAHAQFLMANANSRVALTGHTDER---GTREYNMALGERRAKAV 138 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 L+ +GV+ ++ +S + A N+ NRR++I Sbjct: 139 ESFLVTTGVNPGQLEAVS-YGKEMPINAGHDENAWKENRRVEI 180 >gi|160939630|ref|ZP_02086978.1| hypothetical protein CLOBOL_04522 [Clostridium bolteae ATCC BAA-613] gi|158437421|gb|EDP15185.1| hypothetical protein CLOBOL_04522 [Clostridium bolteae ATCC BAA-613] Length = 281 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 73/218 (33%), Gaps = 18/218 (8%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCK-STDLEKSINKEENYFLPPLSKEKILAMKR 188 N+ L + + + +E + + PL + + Sbjct: 38 NLTKLEEVASAMQRQLGIEAKTEIEDVPSDLKYPVVGEGAQAPEDAEAPLQQTQQQYQAS 97 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + D+A+ I + D + + + I + +F ++ + Sbjct: 98 AREMADMARDIQTYFDSENLD-----AVVTNSENAVYIRFKNDL---LFAPDNANLTDAS 149 Query: 249 IVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304 +L +G +L + I I GHT + N ++ LS +RA + L + G+ Sbjct: 150 KSMLDAVGIMLKEKQDNILAIYINGHT--AQAANSLINDRLLSSERADNVAIYLEEQVGI 207 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 ++ G+ + + NRR+D+++ Sbjct: 208 PPKKLI-CRGYGKYYPIADNTTREGREQNRRVDMIILG 244 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 25/214 (11%), Positives = 64/214 (29%), Gaps = 7/214 (3%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 W YAD +T+++ FF++++ I+ + + + Sbjct: 2 KRQKDEEGGQEWLNTYADMITLVLTFFVLLYSISNVNLTKLEEVASAMQRQLGIEAKTEI 61 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 S + +++ + Q + R ++ + Sbjct: 62 EDV-------PSDLKYPVVGEGAQAPEDAEAPLQQTQQQYQASAREMADMARDIQTYFDS 114 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 +++ +SE + DL + + + + M ++K+ LA I+ Sbjct: 115 ENLDAVVTNSENAVYIRFKNDLLFAPDNANLTDASKSMLDAVGIMLKEKQDNILAIYING 174 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 + I +L + I + +Q P Sbjct: 175 HTAQAANSLINDRLLSSERADNVAIYLEEQVGIP 208 >gi|187919311|ref|YP_001888342.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans PsJN] gi|187717749|gb|ACD18972.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 222 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 9/139 (6%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K++ S L+ L + + + G+ I+I + +F+ + L Sbjct: 71 EAAPATPDASKKQLLSLLAPLRDN---RQITISNAAQGVEIAINAK---ILFNSGDARLL 124 Query: 246 PETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMKSG 303 PE+ VL +I VL I + GHTD P NW LS RA + + G Sbjct: 125 PESSDVLNQIAGVLRERSKNNILVEGHTDNVPISTAKYESNWELSSARAGAVVRFFADKG 184 Query: 304 VSEDRISKISGFAHHRLKI 322 + R++ I G A + I Sbjct: 185 IEAHRMAAI-GRADNFPLI 202 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 19/43 (44%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 D+ G W I Y+D +T LM FL ++++ + Sbjct: 21 DEGEEESGRWLISYSDLITTLMVLFLALYVLQLAKTRELEIKA 63 >gi|299773289|gb|ADJ38719.1| outer membrane protein P5 [Haemophilus parasuis] Length = 367 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDILV 338 RA + ++ GV+ ++ + G+ + + +RR++I V Sbjct: 301 KRAETVANYIVFKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|129142|sp|P24755|OMPA_SEROD RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II gi|152839|gb|AAA26561.1| outer membrane protein II [Serratia odorifera] Length = 243 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 19/124 (15%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L+ + + G+TD N +LS Sbjct: 123 KSDVLFNSAKSSLKPEGQQALDQLYTQLSSMDPKDGSVVVLGYTDPV---GKDAANQKLS 179 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMN-----SANRRIDI 336 RA S L+ G+ D+IS G S + NRR++I Sbjct: 180 EARARSVVDYLVSKGIPADKISA-RGMGEADQVTDSCGYKNGRATKAQIECLAPNRRVEI 238 Query: 337 LVED 340 V+ Sbjct: 239 EVKG 242 >gi|325067556|ref|ZP_08126229.1| OmpA/MotB domain protein [Actinomyces oris K20] Length = 336 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLD 290 F S + VL + E + ++I GH D N LS Sbjct: 46 GDVTFATDSDQLSAQADSVLATVVEQIKKYPSGGELTITGHIDDV---ADDAHNQDLSER 102 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA + + L K +SG ++A+D NRR++I + + Sbjct: 103 RAKAVSERLKKLTDLSAWKESVSGKGESSPRVANDTDEHRQINRRVEITLTPSK 156 >gi|254461106|ref|ZP_05074522.1| peptidoglycan-associated lipoprotein [Rhodobacterales bacterium HTCC2083] gi|206677695|gb|EDZ42182.1| peptidoglycan-associated lipoprotein [Rhodobacteraceae bacterium HTCC2083] Length = 172 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + +F+ +S + ++L L +++ I GH D N L R Sbjct: 62 DRVLFEVDTSTLTGQGRLILDGQTRWLTTNSDYTAIIEGHADEQ---GTREYNVALGERR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A L+ GV R+ ++ + R + + + NRR Sbjct: 119 ANEVRDYLVSKGVPSSRL-RVVSYGKERPIEICSQEGCYAKNRR 161 >gi|116620548|ref|YP_822704.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116223710|gb|ABJ82419.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 262 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 76/228 (33%), Gaps = 22/228 (9%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 + +T Q + + N QQ E +N + + E+ ++ + S + Sbjct: 26 VRNTTAPVQAKVDQVGDQTTRNGQQIEDTRNQVKQVDERAQNGISAAQERASSADQHAAT 85 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + E + + +L + + ++L +V++ + Sbjct: 86 ADQHAGEAMTRANQANQLGEQNTQALNSLKSVVSNIDDYKLQTSVAVP------------ 133 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + + L K+ + I++ G+TD + N LS RA Sbjct: 134 --FQFNKYNLSSDAKQDLDKLASDVKSDKRYFIAVEGYTDKT---GSKAYNSALSRRRAD 188 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILV 338 + + L+ V RI I G + + + NRR+++ V Sbjct: 189 AVVEYLVAQHDVPIYRIHMI-GLGDEKPVDEAKNRAARAKNRRVEVKV 235 >gi|325577896|ref|ZP_08148129.1| outer membrane protein P5 [Haemophilus parainfluenzae ATCC 33392] gi|325160326|gb|EGC72453.1| outer membrane protein P5 [Haemophilus parainfluenzae ATCC 33392] Length = 366 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 16/118 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P+ L I +A +++ G+TD N +LS RA S Sbjct: 253 FAFGKANLKPQAKATLDGIYGEIAQINNANVAVAGYTDRI---GKDAPNLKLSQRRADSV 309 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILVEDRQ 342 L+ GV IS + G S + +RR++I V + Sbjct: 310 ANYLVAKGVPAQNISAV-GHGKANPVTGSTCDAVKGRKALIACLAPDRRVEIAVNGTK 366 >gi|257094585|ref|YP_003168226.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047109|gb|ACV36297.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 184 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 8/104 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ +S+ P+ L +G L + +I GH+D N RLS RA Sbjct: 80 FETNSASLTPKGKQSLDVVGRALNSEKLTAYKFAIEGHSDPR---GGEDYNLRLSQARAE 136 Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 S L + R+ + G +L + P NRR+ I Sbjct: 137 SVVGYLEQSHQIEPARLKPV-GKGPTQLLNPARPEAPENRRVTI 179 >gi|27365501|ref|NP_761029.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus CMCP6] gi|37680458|ref|NP_935067.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus YJ016] gi|320155883|ref|YP_004188262.1| 18K peptidoglycan-associated outer membrane lipoprotein [Vibrio vulnificus MO6-24/O] gi|27361649|gb|AAO10556.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus CMCP6] gi|37199206|dbj|BAC95038.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus YJ016] gi|319931195|gb|ADV86059.1| 18K peptidoglycan-associated outer membrane lipoprotein/ Peptidoglycan-associated lipoprotein precursor/ Outer membrane protein P6/ OmpA/MotB precursor [Vibrio vulnificus MO6-24/O] Length = 181 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++ + +L L+ + ++I GH D N L RA + Sbjct: 81 FAFDNATISSDYEEMLAAHAAYLSKNVNLKVTIEGHADER---GTPEYNIALGERRAQAV 137 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + L GV D+I I + + + + NRR ++ Sbjct: 138 AKYLQALGVQADQI-AIVSYGEEKPLLLGQTEEVYAKNRRAVLV 180 >gi|85714376|ref|ZP_01045364.1| OmpA/MotB [Nitrobacter sp. Nb-311A] gi|85698823|gb|EAQ36692.1| OmpA/MotB [Nitrobacter sp. Nb-311A] Length = 154 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + P+ I L+K L +I GH D N L R Sbjct: 46 DRVFFESDQTSLSPQAITTLEKQARWLQTYNRYSFTIEGHADER---GTREYNIALGARR 102 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A + L G+ R+ IS + R +D S NRR Sbjct: 103 AQTVRSFLASRGIDPGRMRTIS-YGKERPVAVCNDISCWSQNRR 145 >gi|296282485|ref|ZP_06860483.1| hypothetical protein CbatJ_02635 [Citromicrobium bathyomarinum JL354] Length = 305 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 32/280 (11%), Positives = 65/280 (23%), Gaps = 19/280 (6%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 Q + + P E S+ + ++ +++ + + K Sbjct: 34 QQWADTSAETTADTTLTVTGMLPDEISNLPEGPEIDGFISARSDNRIQVTTEDGAKTVVF 93 Query: 127 LENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAM 186 + + + SL + ++ S K A Sbjct: 94 VSPETEIKARGGFLGLARTSLEDEQLYNGVPVTVRTVQWEDGLIAQRISMKDSDLKTAA- 152 Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 I A+ I + FD Sbjct: 153 -----------MIQRGTEQGFAEQTAATEALRGRVADIDNYNVKGTTNVYFDTGEYKLSG 201 Query: 247 ETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304 + L + + G+TD++ N LS RA L + G Sbjct: 202 QAQAELCSAAAQADQMDNALLLVVGYTDST---GSYEINQELSEKRAERVVNYLQQQCGW 258 Query: 305 SEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 R+ +G A + NRR+ + + + Sbjct: 259 KPYRMLTPTGMAQADPVADNSTDYGKQQNRRVAVNILVSK 298 >gi|170697118|ref|ZP_02888213.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|170137954|gb|EDT06187.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] Length = 171 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289 +FD P+ ++++IG L + + + G++D + LS Sbjct: 62 SSGPILFDFDRYNLKPDVRRIVERIGRTLKSAGINGVRVYGYSDDE---GEVAYDLELSR 118 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 RA L+ G+ RI + G + + NRR I+V R Sbjct: 119 RRAEVVAIELVDVGLDGKRI-AVVGKGKSDPVGDNRTPTGRAQNRRAAIVVSPR 171 >gi|313674920|ref|YP_004052916.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312941618|gb|ADR20808.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 639 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 9/111 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+++S+ P+ L K+ + L E I GHTD+ N LS +RA + Sbjct: 531 FEENSAKLRPDMYSDLDKVVDFLLDYPEFKLKISGHTDS---SGDELRNKSLSQERADAI 587 Query: 296 YQV-LMKSGVSEDRISKISGFAHHRLKIA---SDPMNSANRRIDILVEDRQ 342 ++ + E+R+ G+ + + + +D NRR++ + + Sbjct: 588 RDYIIILHPIEEERVVA-EGYGNSQPVVEEEITDDDRRLNRRVEFEIYRPK 637 >gi|171914446|ref|ZP_02929916.1| OmpA/MotB [Verrucomicrobium spinosum DSM 4136] Length = 323 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 8/109 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD + + PE+ L ++ +++ + + GHTD N LS R Sbjct: 217 HGVFFDTNRTEVKPESKPALDEVAKLMTEDPALKVLVVGHTDTV---GGFEPNRSLSERR 273 Query: 292 AYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 A + L K G+S +R+ G ++ + + NRR++++ Sbjct: 274 AAAVVAELKAKYGISAERLFSF-GVSYAAPAATNSTEEGRAQNRRVELV 321 >gi|330830632|ref|YP_004393584.1| major outer membrane protein OmpAII [Aeromonas veronii B565] gi|328805768|gb|AEB50967.1| Major outer membrane protein OmpAII [Aeromonas veronii B565] Length = 345 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 18/125 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289 + +F + E + L + + + + G+TD +N RLS Sbjct: 222 SDVLFAFGKADLKQEGMSALDDLYQQIVDVQPKDGSAVVIGYTDRI---GSDANNQRLSE 278 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILV 338 RA + L+ G+ D++ I G + D + + +RR+++ V Sbjct: 279 ARAQTVADFLISKGLPADKV-SIQGNGASNPVTGNQCDAIKAKAALIDCLGPDRRVEVRV 337 Query: 339 EDRQG 343 QG Sbjct: 338 TGVQG 342 >gi|255536293|ref|YP_003096664.1| Thrombospondin type 3 repeat:OmpA/MotB [Flavobacteriaceae bacterium 3519-10] gi|255342489|gb|ACU08602.1| Thrombospondin type 3 repeat:OmpA/MotB [Flavobacteriaceae bacterium 3519-10] Length = 477 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 12/106 (11%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD S LP +L + S S+ G TDA N LS RA + Sbjct: 371 FDFDSDRILPSNTPILNNAVNYINTSNGNYSVIGGTDA---SGSEAYNQGLSERRANTVK 427 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA--SDP------MNSANRRI 334 L+++GV ++ + G LK + N ANRR+ Sbjct: 428 NYLIQNGVESAKLQSV-GRGEKELKYPECNPTSKCPEWKNRANRRV 472 >gi|156977089|ref|YP_001447995.1| hypothetical protein VIBHAR_05874 [Vibrio harveyi ATCC BAA-1116] gi|156528683|gb|ABU73768.1| hypothetical protein VIBHAR_05874 [Vibrio harveyi ATCC BAA-1116] Length = 1211 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 56/192 (29%), Gaps = 14/192 (7%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + + ++ + + + + ++ + + L + D V+ Sbjct: 189 QAAQGSAHGDLLSKIQEYMATTASVQADKAQAFQGTEEKYQNAVNQLRNEMPDLFVEEGS 248 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 + + + FD + + + L + I I GHT Sbjct: 249 VSLDQRVEDVLLRLNMTFFEFDSYQVTEKGSVHKRIAEQLQALISNPFEIVITGHTCNM- 307 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR--------ISKISGFAHHRLKIASDP-- 326 N LS RA S + ++ + + R I G+A + Sbjct: 308 --GSEAYNLALSEKRAVSVKEAILDAMSPDARSVWSPLFKIVA-KGYAVSLPGNTNRTIE 364 Query: 327 MNSANRRIDILV 338 NRR++I + Sbjct: 365 ERVKNRRVEIYL 376 >gi|21244837|ref|NP_644419.1| hypothetical protein XAC4120 [Xanthomonas axonopodis pv. citri str. 306] gi|21110541|gb|AAM38955.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 451 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 10/148 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + LS +++ +T + +S + MF + ++ +I Sbjct: 310 LKQLLSAQERAGLLRVDEQADGQTRVRLS-----SAAMFASGGVEVELQQRGLIAQIAAA 364 Query: 259 LAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + + + GHTD P R+ +DN+ LS RA + QVL + R+ I G Sbjct: 365 IEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVEAI-GAGA 423 Query: 318 HRLKIAS---DPMNSANRRIDILVEDRQ 342 + + NRR++IL + + Sbjct: 424 SQPIAQPVQLPANRARNRRVEILFQPGE 451 >gi|302184719|ref|ZP_07261392.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642] Length = 300 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 32/108 (29%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L + L V I GH+D N LS RA + Sbjct: 178 FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 G+ E +I + ++ + NRR+ + +E Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLAPNTNEANRARNRRVSVHLER 281 >gi|251792544|ref|YP_003007270.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700] gi|247533937|gb|ACS97183.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700] Length = 363 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 16/118 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + + P L I +A + + G+TD N +LS RA + Sbjct: 250 FAFNKANLRPNAQATLDGIYSEIAKVNKPNVAVSGYTDRI---GSDAYNQKLSQKRAETV 306 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILVEDRQ 342 L+ GV++D IS +G+ + + +RR++I V Q Sbjct: 307 ANYLVSKGVAQDTISA-TGYGKANPVTGNQCNAVKGRKALIACLADDRRVEIAVNGNQ 363 >gi|124010476|ref|ZP_01695114.1| immunogenic 75 kDa protein PG4, putative [Microscilla marina ATCC 23134] gi|123982378|gb|EAY23917.1| immunogenic 75 kDa protein PG4, putative [Microscilla marina ATCC 23134] Length = 645 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSL 289 Q T +D P+ + L ++ +L + I + HTD+ N ++ N +LS Sbjct: 531 QVKTIYYDLDKYFIRPDAVKTLDELLVILYRNPKMRIGLSSHTDSR---NTSKYNVQLSQ 587 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 R+ SA Q L+ G+S RI + F +L ++ + NRR ++LV + Sbjct: 588 RRSQSALQYLVSRGISPQRII-VDWFGETKLVTPCPDGVPCNETQHQLNRRTEVLVLE 644 >gi|110638992|ref|YP_679201.1| outer membrane peptidoglycan-associated protein [Cytophaga hutchinsonii ATCC 33406] gi|110281673|gb|ABG59859.1| outer membrane peptidoglycan-associated protein [Cytophaga hutchinsonii ATCC 33406] Length = 710 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 14/112 (12%) Query: 237 FDKSSSIPLPETIVVLQKI-GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 ++ + + E + I L + I I HTD + N LS RA Sbjct: 601 YETNQTDLNDEAKAAIDNILIPFLKEHPTDKIIISSHTDDV---GSHKYNENLSDQRALK 657 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--------SDPMNSANRRIDILV 338 Q L++ G+S +I G+ + + ++ S NRR + L+ Sbjct: 658 VMQYLIQKGISAKQIQA-KGYGETKPIASNINPDGSENEIGRSINRRTEFLI 708 >gi|329295648|ref|ZP_08252984.1| putative outer membrane lipoprotein [Plautia stali symbiont] Length = 157 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + S P + + ++ + LA + E + + HTD A N +LSL R Sbjct: 49 DKILFGINESDLTPASKASIAQMAKSLAATGIEHLRVDCHTDNY---GKADYNQQLSLKR 105 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A + + G +++ + NRR+ I++ Sbjct: 106 ANAVADQWATGAAIPRQNIVTRGLGMSAPVASNNTAQGRAQNRRVAIVITAP 157 >gi|127512023|ref|YP_001093220.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4] gi|126637318|gb|ABO22961.1| OmpA/MotB domain protein [Shewanella loihica PV-4] Length = 367 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 8/128 (6%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270 V ++ + + F +S++ + ++K+ + + + I G Sbjct: 231 NHKVDANGCTVYREVTEKHELGSIRFANNSAVVNSASYGQIEKLANYMNQNPRATVLIGG 290 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS 329 H N LS RA + ++L+ K G+S+DR+S G+ + I + Sbjct: 291 HASNV---GNPDYNMDLSERRANAVAELLVSKYGISQDRVSA-KGYGITQPLIEGKSAEA 346 Query: 330 --ANRRID 335 ANRRI+ Sbjct: 347 NKANRRIE 354 >gi|319779140|ref|YP_004130053.1| 18K peptidoglycan-associated outer membrane lipoprotein [Taylorella equigenitalis MCE9] gi|317109164|gb|ADU91910.1| 18K peptidoglycan-associated outer membrane lipoprotein [Taylorella equigenitalis MCE9] Length = 166 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 Q + F S PE ++Q + L+ + + G+TD R + N L Sbjct: 58 QNKSVYFAFDSYTVEPEYNEMIQMHAKYLSSNPTRTVRVEGNTD---LRGSSEYNLALGQ 114 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 R+ + ++L + GV+ ++ +S F R + + + NRR DI Sbjct: 115 RRSVAVARLLNQYGVNSAQLEAVS-FGKERPQATGNSEEAHAQNRRADI 162 >gi|148475217|dbj|BAF63174.1| major outer membrane protein OmpAI [Aeromonas veronii] Length = 340 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 18/125 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 + +F PE + L + + + + G+TD N +LS Sbjct: 216 NSDVLFAFGKDTLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLS 272 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDIL 337 RA + L+ G++ ++ I G + + +RR+++ Sbjct: 273 EARARTVANFLVSKGMAASKV-AIEGRGEANPVTGTKCNGVTAKAQLISCLAPDRRVEVR 331 Query: 338 VEDRQ 342 V Q Sbjct: 332 VSGVQ 336 >gi|124002746|ref|ZP_01687598.1| OmpA family protein [Microscilla marina ATCC 23134] gi|123991974|gb|EAY31361.1| OmpA family protein [Microscilla marina ATCC 23134] Length = 775 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 7/102 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S L K+ L + + + + G++D + N LS DRA + Sbjct: 672 FKFGSRKIEKYCHPSLDKLVNFLETNPKVKVELAGYSDEL---GSKKGNVGLSEDRAKAV 728 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 L++ G+ R+ G+ K + + NRR++ Sbjct: 729 VDYLIEKGIDFSRL-TYKGYGKVSPKHPNKTKHGRILNRRVE 769 >gi|261868235|ref|YP_003256157.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans D11S-1] gi|2828561|gb|AAC00068.1| outer membrane protein 34 [Aggregatibacter actinomycetemcomitans] gi|261413567|gb|ACX82938.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans D11S-1] Length = 346 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 16/131 (12%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 ++ + F + P+ L I +A + + G+TD Sbjct: 220 VVRKTFSLNSDVTFAFGKANLKPQAQNTLDGIYGEIAQVNNANVQVAGYTDRI---GSDA 276 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SAN 331 N +LS RA + L+ GVS+ IS +G + + + Sbjct: 277 YNQKLSQRRAETVANYLVSKGVSQQAISA-TGHGKANPVTGNKCDAVKGRKALIACLADD 335 Query: 332 RRIDILVEDRQ 342 RR++I V + Sbjct: 336 RRVEIAVNGTK 346 >gi|126175214|ref|YP_001051363.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155] gi|153001540|ref|YP_001367221.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185] gi|160876276|ref|YP_001555592.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195] gi|217972531|ref|YP_002357282.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223] gi|125998419|gb|ABN62494.1| OmpA/MotB domain protein [Shewanella baltica OS155] gi|151366158|gb|ABS09158.1| OmpA/MotB domain protein [Shewanella baltica OS185] gi|160861798|gb|ABX50332.1| OmpA/MotB domain protein [Shewanella baltica OS195] gi|217497666|gb|ACK45859.1| OmpA/MotB domain protein [Shewanella baltica OS223] gi|315268465|gb|ADT95318.1| OmpA/MotB domain protein [Shewanella baltica OS678] Length = 196 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ + + L + LA + +++ GHTD N++LSL RA + Sbjct: 91 VYFEFAIAEVDFSQWKTLALVKAYLAANDVALTLVGHTD---IVGTPEFNYQLSLQRAQN 147 Query: 295 AYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 ++L++ G + +R + G + NRR+ +V ++ Sbjct: 148 VKRILVEDYGFNPNRF-TVMGKGISEPVADNRSSEGRSLNRRVQFIVNNK 196 >gi|319940886|ref|ZP_08015225.1| OmpA domain-containing protein [Sutterella wadsworthensis 3_1_45B] gi|319805768|gb|EFW02549.1| OmpA domain-containing protein [Sutterella wadsworthensis 3_1_45B] Length = 176 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 7/108 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + F S PE V++ + LA + EV + +G+TD N L R Sbjct: 60 RSVYFAFDSYEVSPEYAAVVEAHAKWLAANPEVKIVIQGNTDER---GGREYNLALGQKR 116 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 + + Q L G+ RI +S F + S+ + NRR DI+ Sbjct: 117 SEAVLQRLQLLGIPSSRIEAVS-FGKEKPIALGHSEEAWAQNRRADIV 163 >gi|153831593|ref|ZP_01984260.1| OmpA family protein [Vibrio harveyi HY01] gi|148872103|gb|EDL70920.1| OmpA family protein [Vibrio harveyi HY01] Length = 350 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F L + ++ I + GHTD N +S RA Sbjct: 212 FQFGQKTLSRSQQSTLAALYSYISVDDRVTKILVDGHTDNV---GSQLANLNVSRQRAEQ 268 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 + L++ GV + ++ +++ + NRR+ + + Sbjct: 269 VAEALVQQGVDRS-LIEVRAHGSRYPIASNNTQAGQAKNRRVTLRLVRD 316 >gi|119478304|ref|ZP_01618335.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [marine gamma proteobacterium HTCC2143] gi|119448644|gb|EAW29889.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [marine gamma proteobacterium HTCC2143] Length = 300 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 8/114 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288 R+ F + + L + + S I GHTD+ N LS Sbjct: 188 NRSRVHFITAKFELTRDAKTQLDDVVRYVKADSSVTGFYIDGHTDSI---GRRLYNLELS 244 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 RA + + L+ +GV E + I + + NRR+ + +E Sbjct: 245 KQRAEAVTKYLVSNGVDEA-MITTRYHGERYPVIDNSSAKNRYANRRVTLRLER 297 >gi|319778081|ref|YP_004134511.1| ompa/motb domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171800|gb|ADV15337.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 176 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 8/106 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ L + + L + + G+TDA+ N LS RA Sbjct: 74 FGLDSAELDATARAELDEFAKALKDNRLSTFSFVVEGYTDAT---GTVHHNEGLSQRRAK 130 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 S L SG+ DRI+ + G + ++ P + NRR+++ ++ Sbjct: 131 SVAAFLTASGIEPDRINAV-GMGEKNPRSSN-PYDPLNRRVEMRIK 174 >gi|260772528|ref|ZP_05881444.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio metschnikovii CIP 69.14] gi|260611667|gb|EEX36870.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio metschnikovii CIP 69.14] Length = 179 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++ +L L+ + +++ GH D N L RA + Sbjct: 79 FAFDNATIARSYEEMLAAHAAYLSKNPSLKVTVEGHADER---GTPEYNIALGERRANAV 135 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + L GV ++IS +S + + + + NRR ++ Sbjct: 136 AKYLEALGVQANQISIVS-YGEEKPLVLGQTEEAYAKNRRAVLV 178 >gi|103485822|ref|YP_615383.1| OmpA/MotB [Sphingopyxis alaskensis RB2256] gi|98975899|gb|ABF52050.1| OmpA/MotB [Sphingopyxis alaskensis RB2256] Length = 170 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 8/110 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD + LQ + L + +++ GH D N L R Sbjct: 63 DRIFFDFDQYNVDAQDQATLQSQAQWLQRNPAVRVTLEGHADER---GTRDYNIALGERR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILV 338 A +A L G+ RI+ + + R +++ + NRR + +++ Sbjct: 120 ANAAKNYLASLGIDPSRIN-VISYGKERPAAIGSNEEAWAQNRRAVTVVI 168 >gi|307132015|ref|YP_003884031.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937] gi|306529544|gb|ADM99474.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937] Length = 353 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L+ + + G TD + N LS Sbjct: 225 KSDVLFNFNKATLKPEGQRSLDQLYSQLSTLDPKDGSVVVLGFTDRL---GSDQYNQTLS 281 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA + L+ G+ ++IS G + +A +RR++I Sbjct: 282 TKRAQTVVDYLVHKGIPANKISA-RGMGKANPVSGSTCTNVKARAALIDCLAPDRRVEIE 340 Query: 338 VED 340 V+ Sbjct: 341 VKG 343 >gi|209546431|ref|YP_002278321.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539288|gb|ACI59221.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 642 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 29/257 (11%), Positives = 69/257 (26%), Gaps = 14/257 (5%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 + ++Q ++ + + + + + + +++ E ++ Sbjct: 387 GQFQVNAQRRVAALRLAAAQEMMAANQPVTDYEPLLVAADSPQVLWQASATLGEIYFSAR 446 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 ++ + +S A + + + Sbjct: 447 RFADAAADYQQAIEIIKNETRTPKAPPADTISDLIQRAAQARILAANPTSDNPQGSFVPA 506 Query: 208 ADNIVKGVLFETTRTGIL-ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEV 265 + GVL + I + FD + S Q++ E L Sbjct: 507 EKDHRSGVLGGIYSENVRGIVPVSIPVPITFDFNKSSFTSIGTEAAQELLEALKEQKPGR 566 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 + + GHTD N +LS RA + L +G+ G + Sbjct: 567 VILIGHTDRR---GGDDYNQKLSERRAQAVADFLKSNGIDAS--IDAEGRGASEPVDVTA 621 Query: 326 PM-------NSANRRID 335 ++ NRR++ Sbjct: 622 TANLTEDDVDALNRRVE 638 >gi|322832273|ref|YP_004212300.1| OmpA/MotB domain protein [Rahnella sp. Y9602] gi|321167474|gb|ADW73173.1| OmpA/MotB domain protein [Rahnella sp. Y9602] Length = 358 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L+ + + G+TD + N +LS Sbjct: 230 KSDVLFNFNKATLKPEGQQALDQLYSQLSSIDPKDGSVIVLGYTDRI---GSEQYNQKLS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDIL 337 RA S L+ G+ ++IS G D + +RR++I Sbjct: 287 EQRAQSVVDYLVSKGIPANKISA-QGQGKSNPVTGSTCDSVKGRAALIDCLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|28900403|ref|NP_800058.1| hypothetical protein VPA0548 [Vibrio parahaemolyticus RIMD 2210633] gi|308095573|ref|ZP_05906887.2| OmpA family protein [Vibrio parahaemolyticus Peru-466] gi|308125408|ref|ZP_05775064.2| OmpA family protein [Vibrio parahaemolyticus K5030] gi|308126617|ref|ZP_05911271.2| OmpA family protein [Vibrio parahaemolyticus AQ4037] gi|28808714|dbj|BAC61891.1| putative protein F-related protein [Vibrio parahaemolyticus RIMD 2210633] gi|308085093|gb|EFO34788.1| OmpA family protein [Vibrio parahaemolyticus Peru-466] gi|308107912|gb|EFO45452.1| OmpA family protein [Vibrio parahaemolyticus AQ4037] gi|308113845|gb|EFO51385.1| OmpA family protein [Vibrio parahaemolyticus K5030] Length = 208 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 72/192 (37%), Gaps = 12/192 (6%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 G L + + E + + + R + ++L + + + Sbjct: 26 GNMLDTAPKTNTELRHPEWGYASASHVSTAPRVNQTARAAEKKSNNVTSLEMFLDRHNIP 85 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272 ++I + +Q + F S+ + L+K+G LA T+V + GH Sbjct: 86 HETIG--GGHLMIRLKEQVH---FQTGSAQLSSNSQDWLRKLGHYLAGRTDVDVVIDGHA 140 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330 D++ A N LS RA + ++ S + R+ GF + + ++ + Sbjct: 141 DST---GAASFNDTLSEKRAREVEKQMLASSIPRQRVFS-RGFGEYVPQCSNATSSGKAC 196 Query: 331 NRRIDILVEDRQ 342 NRR+++++ + Sbjct: 197 NRRVELMLIVDE 208 >gi|114321319|ref|YP_743002.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227713|gb|ABI57512.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 276 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 53/144 (36%), Gaps = 15/144 (10%) Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVI 266 + + + + E T + +FD S++ E ++++ L ++ Sbjct: 132 EIMAENLARERTVEVERVVYRTLSTDVLFDFDSAVLRAEGQDTIREVAAGLQKEFIDPLV 191 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 I GHTD N RLS RA + L+K+G S + G + + Sbjct: 192 VIVGHTDRIGDPG---YNQRLSERRADAVMDALLKNGFSRRDVVA-QGRGEAEPVVFCEG 247 Query: 327 MNSA---------NRRIDILVEDR 341 + NRR+++ V +R Sbjct: 248 DRATPALIACLSPNRRVEVQVLER 271 >gi|213971390|ref|ZP_03399504.1| OmpA family protein [Pseudomonas syringae pv. tomato T1] gi|213923833|gb|EEB57414.1| OmpA family protein [Pseudomonas syringae pv. tomato T1] Length = 417 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 82/271 (30%), Gaps = 11/271 (4%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 ++ A+ G + + SS D + K +T Sbjct: 57 QTPQSDSAATGGHWWQFGSGSESSDAGTDAKAPAPAPAPAPVAKAAATPAAAAGAESSGP 116 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ S + K K + + + + + ++ Sbjct: 117 WYWPFGSNDNAQAKPDAVASKPADKPAAPAMVAKSETDTKWWWPFGAEGQKDEPKALPMP 176 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249 + + L A E + I+ F+ L P T+ Sbjct: 177 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAITAPVD---SSFNPDRPAMLLPNTL 233 Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + ++ +V+ + I GH D N ++S +RA S + SG+ +R Sbjct: 234 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERNR 290 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337 +S+ G + A+D + NRR++IL Sbjct: 291 LSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 320 >gi|253688926|ref|YP_003018116.1| OmpA domain protein transmembrane region-containing protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755504|gb|ACT13580.1| OmpA domain protein transmembrane region-containing protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 366 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + E L ++ L+ + + G TD + N LS Sbjct: 238 KSDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRL---GSEQYNQGLS 294 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +++S G + + +A +RR++I Sbjct: 295 EKRAQSVVDYLVSKGIPANKVSA-RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIE 353 Query: 338 VED 340 V+ Sbjct: 354 VKG 356 >gi|254475683|ref|ZP_05089069.1| OmpA/MotB [Ruegeria sp. R11] gi|214029926|gb|EEB70761.1| OmpA/MotB [Ruegeria sp. R11] Length = 177 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + +F S L L + + I +I GH D N L R Sbjct: 67 DRVLFAVDQSTLSEAAKATLVGQARWLTSNPDYIVTIEGHADEQ---GTREYNLALGARR 123 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333 A +A + L+ GV+ R+ ++ + R +++ + NRR Sbjct: 124 ANAAREFLISQGVAGSRL-QVVSYGKERPLEICSNEACYAKNRR 166 >gi|78484731|ref|YP_390656.1| OmpA/MotB [Thiomicrospira crunogena XCL-2] gi|78363017|gb|ABB40982.1| OmpA/MotB [Thiomicrospira crunogena XCL-2] Length = 248 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 3/142 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ ++ P G+W+I AD MT LM FFLVMW+ + D D +KA + Sbjct: 3 RRQRHEECPEEGGAWEIALADLMTTLMVFFLVMWLTSIVDPDKRKAFVEAL---VGEGAG 59 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 DE N P S K DL K+ + + I S+S Sbjct: 60 GENISADETNTPREPSIMKEDLKPVSTEEIQQAMSKVNPKDIDIEDTPDYTKITLRSDSF 119 Query: 139 QSEHCKNSLTRDSEKGKDLCKS 160 + E+ + L ++ Sbjct: 120 FESGRATITDKTREQLEQLGET 141 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 8/153 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 +DL + + ++ K + E T I++ F+ + +T L Sbjct: 79 EDLKPVSTEEIQQAMSKVNPKDIDIEDTPDYTKITLRSD---SFFESGRATITDKTREQL 135 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 +++GE LA + ISI G+TD+ P N NW LS RA + + + GV ++ + Sbjct: 136 EQLGETLAGRDQEISITGYTDSIPIENLQFPSNWELSAARAATVARTFIYMGVDKN-LVT 194 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 ISG A + + S NRR+ I++ +++ Sbjct: 195 ISGKADNDAVAPNATAYGRSLNRRV-IILVNKK 226 >gi|84393403|ref|ZP_00992162.1| sodium-type flagellar protein MotY precursor [Vibrio splendidus 12B01] gi|84376012|gb|EAP92901.1| sodium-type flagellar protein MotY precursor [Vibrio splendidus 12B01] Length = 293 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 93/307 (30%), Gaps = 23/307 (7%) Query: 40 FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 +T M F ++ + + ++ E Sbjct: 5 LITGSM-LFSLLMSSPVMAQEKRYGAS-----PQQSTWEMVANTPLECRLVHPIPNFGDA 58 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 K +D ++ + + + + + ++ Sbjct: 59 EFSSRASKKIILDFELKMRRPMGATRNVSLISMPPPWRPGESADRMTTIKFFQQFDGYVG 118 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 +++ E P S ++ + ++ + +SS L + V Sbjct: 119 GQTAWGILSELEKGRYPTFSYQEWQSRDQRIEVS-----LSSVLFQEKYNVFSDCVANLL 173 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPF 277 + IS +D++S + L +I + + ++ ++ + +TD+ Sbjct: 174 PYSFEDISFTILH----YDRNSDQLNKSSRKRLSQIADYVRYNQDIDLVLVATYTDSVDS 229 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 + I+ LS RA S + G+ EDRI ++ G+ R ++ NRR+ Sbjct: 230 KGIS---QNLSERRAESLREYFKSLGLPEDRI-QVQGYGKRRPIADNNSPIGKDKNRRVV 285 Query: 336 ILVEDRQ 342 I + Q Sbjct: 286 ISLGRTQ 292 >gi|227329084|ref|ZP_03833108.1| outer membrane protein A [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 361 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + E L ++ L+ + + G TD + N LS Sbjct: 233 KSDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRL---GSEQYNQGLS 289 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +++S G + + +A +RR++I Sbjct: 290 EKRAQSVVDYLVSKGIPANKVSA-RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIE 348 Query: 338 VED 340 V+ Sbjct: 349 VKG 351 >gi|163781628|ref|ZP_02176628.1| predicted inner membrane protein [Hydrogenivirga sp. 128-5-R1-1] gi|159882848|gb|EDP76352.1| predicted inner membrane protein [Hydrogenivirga sp. 128-5-R1-1] Length = 224 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 17/152 (11%) Query: 197 KKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K+++ + V + T + + + D+ F+ + P+ L ++ Sbjct: 73 KEVALKIKRRVQKVLPPWAFQIVITADFVKLRLFDK---VFFEDGTYQLTPKAREALVEV 129 Query: 256 GEVLAHSTE--VISIRGHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 VL E I + GH + RD W LS+ RA + L GV ++S Sbjct: 130 ANVLKKLPENSFIRVEGHVSSLVEVRGRVVRDKWELSVRRATEVVRFLQAQGVEPTKLSA 189 Query: 312 ISGFAHHRLKIASDPMNS-----ANRRIDILV 338 G+ + N R++I + Sbjct: 190 A-GYGDIKPLY---TWRQPILMERNNRVEIYI 217 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 33/75 (44%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 + +W ++D M++L+ FF++++ +++ D + YF P K + + Sbjct: 4 KKKEECPKPPAWLTSFSDLMSLLLTFFILIYAMSSLDVAQLEKFISYFQPERKMFVRKTS 63 Query: 82 GIFDEQNPPERSSQN 96 + PP+ + Sbjct: 64 ILPPIAPPPKEVALK 78 >gi|300692122|ref|YP_003753117.1| outer membrane protein, ompA domain [Ralstonia solanacearum PSI07] gi|299079182|emb|CBJ51850.1| putative outer membrane protein, ompA domain [Ralstonia solanacearum PSI07] Length = 218 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 15/120 (12%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD ++ PE L + L + T + I GHTD+ + N RLS+ RA Sbjct: 100 DALFDFDKAVLKPEGKAKLDDLVSKLKNITLEVVIAVGHTDSF---GSDKYNDRLSVRRA 156 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNSA------NRRIDILVEDRQ 342 + L+ G+ +R+ G +LK+ + NRR+++ V + Sbjct: 157 EAVKGYLVSKGIEANRVYT-EGKGKRQLKVDPKSCKGSRKAQIACQQPNRRVEVEVVGTR 215 >gi|148284999|ref|YP_001249089.1| peptidoglycan-associated lipoprotein precursor [Orientia tsutsugamushi str. Boryong] gi|146740438|emb|CAM80934.1| peptidoglycan-associated lipoprotein precursor [Orientia tsutsugamushi str. Boryong] Length = 202 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 11/158 (6%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + + ++ I++ S V N + + + + I +++ F Sbjct: 44 EDNDDIAEIVSSINAESSDQVTSNNAQQEGYVDVKHEQFLQAIHRKHKVYFATEKFDLSE 103 Query: 247 ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 E+ VL+ + L ++ + I I GH D N L RA S Q L+ GVS Sbjct: 104 ESKRVLRAQSDWLKNNPDVKIIIEGHCDER---GTREYNLALGKKRADSVKQFLVTLGVS 160 Query: 306 EDRISKISGFAHHRL---KIASDPMNS--ANRR-IDIL 337 D+I S + + + + NRR + I+ Sbjct: 161 RDKIETTS-YGKDKPEVEVTKDNKDEAYRLNRRSVTII 197 >gi|187479386|ref|YP_787411.1| peptidoglycan-associated lipoprotein [Bordetella avium 197N] gi|115423973|emb|CAJ50526.1| peptidoglycan-associated lipoprotein [Bordetella avium 197N] Length = 165 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 7/114 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 SI+ Q+ + FD S + +++ LA + I G+TD A N Sbjct: 53 SILAQQRSVYFDFDSYGVSDQYRGLVETHARYLASHPQQRIKIEGNTDDR---GGAEYNL 109 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L RA + +++ GV++ +I IS F + K + NRR DI+ Sbjct: 110 ALGQRRADAVRRMMTLLGVADAQIEAIS-FGKEKPKATGSTEADFAENRRADIV 162 >gi|170737617|ref|YP_001778877.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169819805|gb|ACA94387.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3] Length = 170 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD P+ ++++IG L + + + G++D A + LS R Sbjct: 63 EPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDE---GTAAYDAELSRRR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A L+ G+ RI I G + + NRR I+V R Sbjct: 120 AEVVAVELVDVGLDAKRI-AIVGKGKLDPVGDNRTPAGRAQNRRAAIVVSPR 170 >gi|120603975|ref|YP_968375.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4] gi|120564204|gb|ABM29948.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4] Length = 259 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 75/205 (36%), Gaps = 41/205 (20%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 +++K ++ L + K + L+ L +KGV + L+ I + Sbjct: 52 EAAEQKQELTEKYDELTNARKTRAEMLTSLERSLKMKGVEVSIDKDHGLLHI---PEGIL 108 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI------------------------SIRGHT 272 FD S+ PE L I E L+ + GHT Sbjct: 109 FDSGSAALPPEGGRTLDIIAEQLSTLLPCYSGKADAPAPDECRDNYKPGRLEAVFVEGHT 168 Query: 273 DASPF--RNIARDNWRLSLDRAYSAYQVLMKS--------GVSEDRISKISGFAHHRLKI 322 D P R +DNW LS RA + Y+ L+ + D + +SG+A R + Sbjct: 169 DNVPMPPRGGIQDNWDLSTKRAVTTYRHLLGHAPTLAAFVNLDGDPLFGVSGYAASRPRN 228 Query: 323 ASD--PMNSANRRID--ILVEDRQG 343 D ++ NRRID L+ +G Sbjct: 229 PHDTPTPDAQNRRIDLRFLLAAPRG 253 >gi|157826223|ref|YP_001493943.1| peptidoglycan-associated lipoprotein precursor [Rickettsia akari str. Hartford] gi|157800181|gb|ABV75435.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia akari str. Hartford] Length = 155 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P+ L++ L+ E ++ GH D N L RA +A Sbjct: 53 FAFDSSSLSPKAKEELERQACWLSKHPEVKATVEGHCDER---GTREYNLGLGERRAEAA 109 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337 + L+ G+ R++ IS + R + + + NRR + ++ Sbjct: 110 KKFLVHKGIDHSRLNTIS-YGKDRPAMIGNTEEAFAYNRRAVTVV 153 >gi|312963125|ref|ZP_07777610.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6] gi|311282636|gb|EFQ61232.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6] Length = 229 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 79/230 (34%), Gaps = 28/230 (12%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 E ++S S + K+ + ++ K++ + K A Sbjct: 1 MKEKPNEWVSISDLMAGVMAVVMLMLVVSVLQNKAAEAAMAVEKQQMEAARQEERSKGDA 60 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 +R + LA S D L + +++ D F + S+ Sbjct: 61 AQRASLSKLLAAMQSDLQRTGETD------LVDIDIQNRRLTLPDNA----FARGSACIT 110 Query: 246 PETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNI----------ARDNWRLSLD 290 P L + +A + + GHTD P DN+ LS Sbjct: 111 PAAQGALTLLSARVATFIKDYGQGQVLVEGHTDNLPVSRPVTDYERFCTVYDDNYTLSAA 170 Query: 291 RAYSAYQVLMKSGVSE--DRISKISGFAHHRLKIASDPMNSANRRIDILV 338 RA A ++L+++ + R ++G+ R K DP ++ NRR+++ + Sbjct: 171 RAREARKLLIQA-IEPQQARRVVVAGYGDSRPKPGIDPASALNRRVEVQL 219 >gi|260363437|ref|ZP_05776283.1| outer membrane protein [Vibrio parahaemolyticus K5030] gi|260876568|ref|ZP_05888923.1| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|260895072|ref|ZP_05903568.1| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|308086012|gb|EFO35707.1| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|308093570|gb|EFO43265.1| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|308113744|gb|EFO51284.1| outer membrane protein [Vibrio parahaemolyticus K5030] gi|328473927|gb|EGF44744.1| putative outer membrane protein [Vibrio parahaemolyticus 10329] Length = 205 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 9/114 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 +F S P ++++ + L I ++G+ + + N LS RA Sbjct: 82 RVLFANDSDEINPVFAKQIRELSDFLKEYPSTSIELQGYASRT---GGSEHNLDLSKRRA 138 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDRQG 343 + + L+++G++ DR+ I G+ + + NRR+ V +G Sbjct: 139 ENVRKALLQNGITPDRV-TIVGYGDTV-LATTGTDEVSHALNRRVTATVVGHKG 190 >gi|309780841|ref|ZP_07675582.1| peptidoglycan-associated outer-membrane lipoprotein [Ralstonia sp. 5_7_47FAA] gi|308920523|gb|EFP66179.1| peptidoglycan-associated outer-membrane lipoprotein [Ralstonia sp. 5_7_47FAA] Length = 167 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S PE +L + L + I+G+TD + N L RA + Sbjct: 67 FDFDSYSVKPEYQGLLGQHSRYLQSHNQRKVLIQGNTDER---GTSEYNLALGQKRAEAV 123 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV + ++ +S + + + + NRR DI+ Sbjct: 124 RRALSSMGVPDSQMEAVS-LGKEKPQATGHDEDSWAQNRRADIV 166 >gi|302343856|ref|YP_003808385.1| peptidoglycan-associated lipoprotein [Desulfarculus baarsii DSM 2075] gi|301640469|gb|ADK85791.1| peptidoglycan-associated lipoprotein [Desulfarculus baarsii DSM 2075] Length = 179 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 7/100 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD E +L + L+ E + + GH D N L RA + Sbjct: 78 FDYDRYDLSAEAKQILNDKAQFLSQHPEVTVIVEGHCDER---GSNSYNMALGEKRARAC 134 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 Q LM GV+ DR+ ++ + R + + +ANRR Sbjct: 135 EQYLMAMGVASDRL-EVVSYGEERPLVPGNTEEAYAANRR 173 >gi|88860422|ref|ZP_01135060.1| putative Component of sodium-driven polar flagellar motor [Pseudoalteromonas tunicata D2] gi|88817620|gb|EAR27437.1| putative Component of sodium-driven polar flagellar motor [Pseudoalteromonas tunicata D2] Length = 290 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 +SS E+ L KIGE L + + + I +TD+ N LS RA + Sbjct: 189 NSSELTKESKKRLDKIGEYLKNDPNIESVLISAYTDSY---GGRYTNDELSKKRALTIKT 245 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + + GV + R+ ++ GF R + NRR+ I + Sbjct: 246 YMTELGVEDKRV-EVEGFGEKRHIAPNTTILGRQLNRRVVIQI 287 >gi|308049997|ref|YP_003913563.1| peptidoglycan-associated lipoprotein [Ferrimonas balearica DSM 9799] gi|307632187|gb|ADN76489.1| peptidoglycan-associated lipoprotein [Ferrimonas balearica DSM 9799] Length = 175 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 7/138 (5%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + V ++ V + Q + FD S + +L+ L + Sbjct: 41 VESGVQTGAIEQVQTPEEIQRQKYEQLRQEHIIYFDFDRSDVSGQYAELLEAHAAFLVEN 100 Query: 263 TEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I GH D N L RA + + L GV +I+ +S + + Sbjct: 101 PSTKVLIEGHADER---GTPEYNIALGERRAKAVERYLQGLGVLSSQITIVS-YGEEKPL 156 Query: 322 IA--SDPMNSANRRIDIL 337 + +D ++ NRR ++ Sbjct: 157 DSSATDAAHAKNRRAVLV 174 >gi|254439458|ref|ZP_05052952.1| OmpA family protein [Octadecabacter antarcticus 307] gi|198254904|gb|EDY79218.1| OmpA family protein [Octadecabacter antarcticus 307] Length = 310 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 223 GILISIIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPF 277 + S+ DQ + F S+ +++ LQ + + L + + + GHTD+ Sbjct: 187 NLSQSLEDQGRFILTGLVFQTGSAQLGDASVMSLQDLADYLIANPDRTVALVGHTDSV-- 244 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 N LS RA S + L+ + R G + + + NRR++ Sbjct: 245 -GSLDGNIALSKRRAGSVLERLVTTYDIPRRQLDAQGMGYLSPVATNLTEDGREANRRVE 303 Query: 336 ILVEDRQ 342 +++ Q Sbjct: 304 VIITSTQ 310 >gi|315110066|gb|EFT82042.1| OmpA family protein [Propionibacterium acnes HL030PA2] Length = 120 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287 D + +FD S + P ++ + + L + I + G+TD+ A N L Sbjct: 9 DLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 65 Query: 288 SLDRAYSAYQVL---MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 S RA S +VL + G++ +G ++D NRR+ I V++ Sbjct: 66 SRRRAASVAKVLGSQLSKGIT----LVTAGKGEADPVTSNDSEAGRRLNRRVTITVKE 119 >gi|74095537|emb|CAJ27303.1| conserved hypothetical protein [Cronobacter sakazakii] Length = 536 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F S+ P LQ + ++ I GH+D + N +LS+ RA Sbjct: 419 SLFSSGSARLRPHGPAALQPLFTLVNQHPENRFLIIGHSDNT---GNPEVNQQLSVSRAI 475 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRID 335 + + L+K+ I G ++ NRR++ Sbjct: 476 AVREWLVKTTKRPATQFDIYGLGASEPVAGNDNETGRELNRRVE 519 >gi|85706710|ref|ZP_01037802.1| peptidoglycan-associated lipoprotein [Roseovarius sp. 217] gi|85668768|gb|EAQ23637.1| peptidoglycan-associated lipoprotein [Roseovarius sp. 217] Length = 170 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F+ L L + + ++ GH D N L R Sbjct: 60 DRVLFEVDQPTLNATAQSTLDGQANWLMTNRDFTAVIEGHADEQ---GTREYNLALGARR 116 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + + L+ GV+ +R+ ++ F R +++ + NRR Sbjct: 117 ANAVQEYLITQGVAPNRL-RVVSFGKERPIEICSNEACYTKNRR 159 >gi|148977601|ref|ZP_01814177.1| sodium-type flagellar protein MotY precursor [Vibrionales bacterium SWAT-3] gi|145963116|gb|EDK28384.1| sodium-type flagellar protein MotY precursor [Vibrionales bacterium SWAT-3] Length = 284 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 92/300 (30%), Gaps = 22/300 (7%) Query: 47 FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106 F ++ +A + + ++ E Sbjct: 2 LFSLLMSSSAMAQEKRYGAS-----PQQSTWEMVANTPLECRLVHPIPNFGDAEFSSRAS 56 Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 K +D ++ + + + + + ++ Sbjct: 57 KKIILDFELKMRRPMGATRNVSLISMPPPWRPGESADRMTTIKFFQQFDGYVGGQTAWGI 116 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 +++ E P S ++ + ++ + +SS L + + + I Sbjct: 117 LSELEKGRYPTFSYQEWQSRDQRIEVA-----LSSVLFQEKYNVFSDCIANLLPYSFEDI 171 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDN 284 S +D++S + L +I E + ++ ++ + +TD++ + I+ Sbjct: 172 SFTILH----YDRNSDQLNKSSRKRLSQIAEYVRYNQDIDLVLVATYTDSADSKGIS--- 224 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS RA S + G+ EDRI ++ G+ R + NRR+ I + Q Sbjct: 225 QNLSERRAESLREYFKSLGLPEDRI-QVQGYGKRRPIADNSSPIGKDKNRRVVISLGRTQ 283 >gi|87118951|ref|ZP_01074849.1| peptidoglycan-associated lipoprotein OprL [Marinomonas sp. MED121] gi|86165342|gb|EAQ66609.1| peptidoglycan-associated lipoprotein OprL [Marinomonas sp. MED121] Length = 208 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 7/114 (6%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDN 284 ++ + FD SI PE L K + L + + + GH D N Sbjct: 96 DMLVGVAHIFYFDFDKSIVRPEAREALAKHAKFLVANPDARVVLEGHADER---GTREYN 152 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336 L RA + + L GV+ +I +S F + ANRR+++ Sbjct: 153 MALGERRAKAVSRYLTIQGVAAAQIESVS-FGEEKPLEFGHDKAAWQANRRVEV 205 >gi|162454745|ref|YP_001617112.1| OmpA-domain-containing protein [Sorangium cellulosum 'So ce 56'] gi|161165327|emb|CAN96632.1| OmpA-domain outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 129 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 9/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSLD 290 +D PE+ VL + +L E+ ++ GHTD N +LS Sbjct: 22 RPIFYDLDKDEIRPESFSVLDAVANILRTHPEITALTVEGHTDNQ---GSVEHNIKLSER 78 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPM-NSANRRIDILVEDR 341 RA + + L++ GV+ G+ +D + NRR++ ++ + Sbjct: 79 RANAVVRYLVQRGVATP--MTAPGYGAGAPLCFTNDEGCRAMNRRVEFRIKSK 129 >gi|153838879|ref|ZP_01991546.1| outer membrane protein [Vibrio parahaemolyticus AQ3810] gi|149747670|gb|EDM58584.1| outer membrane protein [Vibrio parahaemolyticus AQ3810] Length = 205 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 9/114 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 +F S P ++++ + L I ++G+ + + N LS RA Sbjct: 82 RVLFANDSDEINPVFAKQIRELSDFLKEYPSTSIELQGYASRT---GGSEHNLDLSKRRA 138 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDRQG 343 + + L+++G++ DR+ I G+ + + NRR+ V +G Sbjct: 139 ENVRKALLQNGITPDRV-TIVGYGDTV-LATTGTDEVSHALNRRVTATVVGHKG 190 >gi|330828258|ref|YP_004391210.1| outer membrane protein A [Aeromonas veronii B565] gi|328803394|gb|AEB48593.1| Outer membrane protein A [Aeromonas veronii B565] Length = 345 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 17/121 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + + PE L + + V ++ GHTD N +LS Sbjct: 223 SDVLFDFNKATLKPEASQALDSLYSQIEEARPKDGVATVIGHTDRI---GSDAYNQKLSE 279 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMN------SANRRIDILVE 339 RA + L+ G+ +I+ + G + +RR+D+ VE Sbjct: 280 QRAQTVANYLVGKGIPAAKIN-VEGRGKSSPVTGDSCVSKSKRELIVCLAPDRRVDVKVE 338 Query: 340 D 340 Sbjct: 339 G 339 >gi|260591055|ref|ZP_05856513.1| OmpA family protein [Prevotella veroralis F0319] gi|260536920|gb|EEX19537.1| OmpA family protein [Prevotella veroralis F0319] Length = 695 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 34/145 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I++ + +D + PE+ L + ++L + I + HTD A N Sbjct: 522 INVPVLIDNIFYDFDKATLRPESEKALDDLVKLLNENPNVTIELSAHTDCI---GSADYN 578 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-------------KIASD--PMN- 328 RLS RA + L G+++DR++ + G+ R +D + Sbjct: 579 KRLSQRRADAVVAYLTAHGIAQDRLTPV-GYGKERPKKIRKKLTEKYNWLKENDVLTEDF 637 Query: 329 -------------SANRRIDILVED 340 NRR + +V Sbjct: 638 IKKLPKDKQEVCNQLNRRTEFIVLR 662 >gi|157369997|ref|YP_001477986.1| outer membrane protein A [Serratia proteamaculans 568] gi|157321761|gb|ABV40858.1| OmpA domain protein transmembrane region-containing protein [Serratia proteamaculans 568] Length = 358 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 27/135 (20%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S E L ++ L+ + G+TDA + N +LS Sbjct: 228 KSDVLFNFNKSTLKAEGQQALDQLYTQLSAMDPKDGSAVVLGYTDAV---GSDQYNQKLS 284 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMN-----SANRRID 335 RA S L+ G+ ++IS G + + +RR++ Sbjct: 285 EKRAQSVVDYLVSKGIPSEKISA-RGMGEADSVTGNTCGYKAGRATKAQIACLAPDRRVE 343 Query: 336 I-------LVEDRQG 343 I +V QG Sbjct: 344 IEVKGIKDVVTQPQG 358 >gi|222823242|ref|YP_002574815.1| peptidoglycan-associated lipoprotein precursor [Campylobacter lari RM2100] gi|222538463|gb|ACM63564.1| peptidoglycan-associated lipoprotein precursor [Campylobacter lari RM2100] Length = 161 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 8/109 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDR 291 FD + V+ E+ I + G+ D N L L R Sbjct: 55 NVYFDFDKFNVRSDMQKVIANNAEIFNKEAANAAIVVEGNCDEW---GTDEYNQALGLKR 111 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 A + + L+ GVS DRI + + + NRR + + Sbjct: 112 AKAVKESLVAQGVSADRI-SVKSYGETNPVCTERTKACDAQNRRAEFKL 159 >gi|329755848|gb|AEC04321.1| outer membrane protein A [Pasteurella multocida] Length = 358 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ + F + P VL I +A Sbjct: 215 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 274 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 275 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 330 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V+ + Sbjct: 331 CDSVKGRKALIACLADDRRVEIAVKGNK 358 >gi|329755832|gb|AEC04313.1| outer membrane protein A [Pasteurella multocida] gi|329755834|gb|AEC04314.1| outer membrane protein A [Pasteurella multocida] gi|329755836|gb|AEC04315.1| outer membrane protein A [Pasteurella multocida] gi|329755838|gb|AEC04316.1| outer membrane protein A [Pasteurella multocida] gi|329755844|gb|AEC04319.1| outer membrane protein A [Pasteurella multocida] gi|329755850|gb|AEC04322.1| outer membrane protein A [Pasteurella multocida] Length = 358 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ + F + P VL I +A Sbjct: 215 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 274 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 275 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 330 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V+ + Sbjct: 331 CDSVKGRKALIACLADDRRVEIAVKGNK 358 >gi|329755830|gb|AEC04312.1| outer membrane protein A [Pasteurella multocida] Length = 358 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ + F + P VL I +A Sbjct: 215 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 274 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 275 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 330 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V+ + Sbjct: 331 CDSVKGRKALIACLADDRRVEIAVKGNK 358 >gi|62548381|gb|AAX86828.1| outer membrane protein [Pasteurella multocida] Length = 358 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ + F + P VL I +A Sbjct: 215 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 274 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 275 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 330 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V+ + Sbjct: 331 CDSVKGRKALIACLADDRRVEIAVKGNK 358 >gi|49182350|gb|AAT57677.1| OmpA [Pasteurella multocida] Length = 351 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ + F + P VL I +A Sbjct: 208 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 267 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 268 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 323 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V+ + Sbjct: 324 CDSVKGRKALIACLADDRRVEIAVKGNK 351 >gi|49182356|gb|AAT57680.1| OmpA [Pasteurella multocida] Length = 353 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ + F + P VL I +A Sbjct: 210 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 269 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 270 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 325 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V+ + Sbjct: 326 CDSVKGRKALIACLADDRRVEIAVKGNK 353 >gi|58422901|gb|AAW73250.1| OmpA [Enterobacter cloacae] Length = 223 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 7/96 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G TD N +LS Sbjct: 115 KSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRI---GSDAYNQKLS 171 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 RA S L+ G+ ++I G + Sbjct: 172 EKRAQSVVDYLISKGIPANKI-SPRGMGESNPVTGN 206 >gi|260431107|ref|ZP_05785078.1| peptidoglycan-associated lipoprotein [Silicibacter lacuscaerulensis ITI-1157] gi|260414935|gb|EEX08194.1| peptidoglycan-associated lipoprotein [Silicibacter lacuscaerulensis ITI-1157] Length = 167 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F S E +LQ + L A++ +I GH D N L R Sbjct: 57 DRVLFAVDQSTLSSEAQSILQGQADWLLANTDYTATIEGHADEQ---GTREYNLALGARR 113 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 A +A + L+ GV+ +R+ +S + R S NRR ++ Sbjct: 114 ANAAREFLISRGVAGNRLQTVS-YGKERPIEICSTEECYSKNRRAVTVLTGS 164 >gi|75677209|ref|YP_319630.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255] gi|74422079|gb|ABA06278.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255] Length = 213 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S+ P T L +G+ L VI + GHTD + N LS RA Sbjct: 101 FDFDSAAVTPRTEPQLHSLGKALTSDELAGSVIMLGGHTD---GKGSDAYNQNLSERRAE 157 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + + L++ + + G+ K +DP + NRR++++ Sbjct: 158 AVKRFLVETYKIPAANLVAA-GYGKEGYKNPADPFAAENRRVEVV 201 >gi|15602651|ref|NP_245723.1| hypothetical protein PM0786 [Pasteurella multocida subsp. multocida str. Pm70] gi|12721089|gb|AAK02870.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 353 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ + F + P VL I +A Sbjct: 210 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 269 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 270 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 325 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V+ + Sbjct: 326 CDSVKGRKALIACLADDRRVEIAVKGNK 353 >gi|149375118|ref|ZP_01892890.1| OmpA/MotB domain protein [Marinobacter algicola DG893] gi|149360482|gb|EDM48934.1| OmpA/MotB domain protein [Marinobacter algicola DG893] Length = 192 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD ++ E VL L + I GH D N L RA + Sbjct: 91 FDFDTAEIKAEAREVLVAHARFLQANPGQNVRIEGHADER---GTKEYNLALGERRANAI 147 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 + L+ +G S + IS + + + +S+ + NRR++++ Sbjct: 148 ERFLIVNGASRGQTETIS-YGEEKPAVMGSSESAWAQNRRVELV 190 >gi|89889605|ref|ZP_01201116.1| insulin-like peptidase, M16 family [Flavobacteria bacterium BBFL7] gi|89517878|gb|EAS20534.1| insulin-like peptidase, M16 family [Flavobacteria bacterium BBFL7] Length = 573 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 11/118 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 Q N FD + L +I ++ ++ + + +TD N LS Sbjct: 460 QINRIYFDNDKAAITTSAAKELDRIVAMMMKNSSMEILAETYTDTR---GSDSYNKTLSQ 516 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRRIDILVEDR 341 RA + L+ G++ +R+ + G + +D +RR + + + Sbjct: 517 KRADAVRGYLISKGIAANRVKAV-GRGEDNPVVDCESKTCTDEEYEQSRRTEFTITKK 573 >gi|92114381|ref|YP_574309.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043] gi|91797471|gb|ABE59610.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043] Length = 830 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 42/125 (33%), Gaps = 18/125 (14%) Query: 232 RNTPMFDKSSSIP---LPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWR 286 + +F L K+ E L I I GH D N + Sbjct: 710 ESDTLFAFGRGDYAGLQQAGQQELDKLAERLLNTQDLGQILITGHADPI---GNEAANQQ 766 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA-------NRRIDIL 337 LSL RA + Q L+ GV + + G R + D + NRR++I Sbjct: 767 LSLQRAMTVRQYLIGKGVPAG-LIEAKGAGSERPLVTCDDDQPRAQLIECLAPNRRVEIE 825 Query: 338 VEDRQ 342 V +Q Sbjct: 826 VRKQQ 830 >gi|89094682|ref|ZP_01167618.1| sodium-type flagellar protein MotY, putative [Oceanospirillum sp. MED92] gi|89081028|gb|EAR60264.1| sodium-type flagellar protein MotY, putative [Oceanospirillum sp. MED92] Length = 285 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 8/113 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSL 289 R +F + + L I + S + I I GH+D+ N +S Sbjct: 176 RTAVLFPSAQWRLSDASRERLDLIALYVKNDDSVKGIYIDGHSDSQ---GRRLMNRDMSK 232 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA L+ G+ + + + ++ NRR+ I +E Sbjct: 233 RRAEEVTAYLISIGLDPN-MITTRYHGERYPVVPNNSKKNRDRNRRVTIRLEK 284 >gi|298346001|ref|YP_003718688.1| flagellar motor protein B [Mobiluncus curtisii ATCC 43063] gi|304390241|ref|ZP_07372195.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315657506|ref|ZP_07910388.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236062|gb|ADI67194.1| flagellar motor protein B [Mobiluncus curtisii ATCC 43063] gi|304326723|gb|EFL93967.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491978|gb|EFU81587.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 307 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 73/201 (36%), Gaps = 7/201 (3%) Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 N L D G ++ ++ P E+I AM+ L + K++ Sbjct: 62 QIANPLQTDGGLGILAGSTSAVQLGTLMGNLNQNPESQPERIQAMREASHLNSIKKQVEE 121 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L + + T G+++ ++ F + P VL+ I L Sbjct: 122 QLKDAGKEG---SLAMRITDKGLVLGMVANDTY--FKTGDATIQPTAREVLKAISPTLMS 176 Query: 262 STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 E I+I G+ D P + N+ L+ RA L GV ++ IS A H+ Sbjct: 177 IEEGIAIEGYADPQPISSAKFPSNYHLASARAIEVLIALKDDGVPGTKLRSISYGADHQT 236 Query: 321 KI-ASDPMNSANRRIDILVED 340 + + NRR+DI++ Sbjct: 237 EATPGQDAWAFNRRVDIVIMS 257 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 50/167 (29%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ P+N W + Y D +TV+M FLV++ I+ D + + + Sbjct: 3 KRKHECPEPDNTERWAVSYLDMITVMMCLFLVLYAISQVDQGKLSKLRTSLAAGFNSTIQ 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + + + + N Q + N+I Q Sbjct: 63 IANPLQTDGGLGILAGSTSAVQLGTLMGNLNQNPESQPERIQAMREASHLNSIKKQVEEQ 122 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + K K L + K + + P ++E + A Sbjct: 123 LKDAGKEGSLAMRITDKGLVLGMVANDTYFKTGDATIQPTAREVLKA 169 >gi|262402315|ref|ZP_06078876.1| outer membrane protein [Vibrio sp. RC586] gi|262351097|gb|EEZ00230.1| outer membrane protein [Vibrio sp. RC586] Length = 212 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 7/187 (3%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 +T N NY + LQD L D + Sbjct: 16 TTSALAQQNDYANYEGDEYDYRPTPLANQIADLQDDDNDGVINARDLCPDTPRGSEIDND 75 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFR 278 + S Q+ +F SS P + ++++ E L I ++G+ Sbjct: 76 GCGTFVKSSQMQQLHILFANDSSAIEPAFLTQIRQMAEFLKTYPSTSIELQGYASKV--- 132 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 A N LS R+ + L++ G++ +R++ I G+ L+ D ++ NRR+ Sbjct: 133 GGAEHNLALSKQRSEAVRDQLLRYGITPNRVN-IVGYGDSVLEADGTDDVSHARNRRVTA 191 Query: 337 LVEDRQG 343 V +G Sbjct: 192 TVVGYKG 198 >gi|226330649|ref|ZP_03806167.1| hypothetical protein PROPEN_04569 [Proteus penneri ATCC 35198] gi|225201444|gb|EEG83798.1| hypothetical protein PROPEN_04569 [Proteus penneri ATCC 35198] Length = 167 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288 R+ +F+ + S E L + LA+ + + G+TD N LS Sbjct: 39 RSDVLFNFNKSTLKAEGQEALNGLYNELANIDPTQGRVVVIGYTDRI---GSQNYNLPLS 95 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337 RA S L+ G+ + IS G + D + + +RR++I Sbjct: 96 EKRAQSVVDYLVSKGIPANSISA-EGRGKENPVTGNTCDNVKARSALIDCLAPDRRVEIE 154 Query: 338 VED 340 ++ Sbjct: 155 IQG 157 >gi|209168561|gb|ACI42276.1| putative outer membrane protein [Vibrio alginolyticus] Length = 213 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 9/123 (7%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARD 283 + S + + +F S + P ++++ + L I I+G+ + A Sbjct: 81 VDSSQEMQIRVLFANDSDVINPIFTQQIRELSDFLKEYPNTSIEIQGYASRT---GTAEH 137 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM---NSANRRIDILVED 340 N LS RA + + LM +G+S DR+ I G+ ++ NRR+ V Sbjct: 138 NLDLSKRRAENVRKELMTNGISGDRV-TIVGYGDTV-LATQGTDQVSHALNRRVTATVIG 195 Query: 341 RQG 343 +G Sbjct: 196 HKG 198 >gi|37525710|ref|NP_929054.1| outer membrane protein A [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785139|emb|CAE14068.1| Outer membrane protein A precursor (Outer membrane protein II*) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 368 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 19/125 (15%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 R+ +F+ +SS E L ++ LA+ + + + G+TD N +LS Sbjct: 237 RSDVLFEFASSELKAEGKHNLDQLYTELANIDPNQGKVLVLGYTDRI---GKDVYNQKLS 293 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ IS G + + +RR++I Sbjct: 294 QKRAQSVVDYLVSKGIPSGSISA-EGHGKANPV-TGSTCDKVHKPNLINCLAPDRRVEIE 351 Query: 338 VEDRQ 342 ++ + Sbjct: 352 IQGTK 356 >gi|332288389|ref|YP_004419241.1| outer membrane protein A [Gallibacterium anatis UMN179] gi|330431285|gb|AEC16344.1| outer membrane protein A [Gallibacterium anatis UMN179] Length = 247 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 11/111 (9%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + +FD S+ PE+ V++ + L+ + I I G+TD N LS RA Sbjct: 138 SDFLFDFDSANLKPESQKVIEDLVNKLSKNK-QIWITGYTDRL---GSESYNLALSQRRA 193 Query: 293 YSAYQVLMKSGVSEDRISKI-SGFAHHRLKIASDPMNSA------NRRIDI 336 + ++ G+ RI I G A + ++ NRR+ I Sbjct: 194 VAVKNAMVALGIPASRIKAIGMGKADQVKACEKETGSALRQCLAPNRRVVI 244 >gi|317402473|gb|EFV83041.1| peptidoglycan-associated lipoprotein [Achromobacter xylosoxidans C54] Length = 166 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 7/114 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 SI+ Q+ + FD S + +++ LA + I G+TD A N Sbjct: 54 SILAQQRSVYFDFDSYTVSDQYRGLVETHARYLASHQQQKIKIEGNTDER---GGAEYNL 110 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L RA + +++ GVS+++I IS F + K + NRR DI+ Sbjct: 111 ALGQRRADAVRRMMTLLGVSDNQIETIS-FGKEKPKATGSSEADFAENRRADIV 163 >gi|319426005|gb|ADV54079.1| OmpA/MotB domain protein [Shewanella putrefaciens 200] Length = 289 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 8/106 (7%) Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + + L ++ E LA+ V + + +TD+ N R+S +RA S + Sbjct: 187 GGTDLTRFSKQQLTRVQEYLAYDPNVELVLVDAYTDSY---GGRSVNQRVSDNRAESVKE 243 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + SG+ +DRI + G R +++ + NRR+ I + Sbjct: 244 FFLSSGIPQDRILTV-GHGERRHVASNEDIDERARNRRVVIRISKP 288 >gi|120599225|ref|YP_963799.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1] gi|120559318|gb|ABM25245.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1] Length = 289 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 8/106 (7%) Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + + L ++ E LA+ V + + +TD+ N R+S +RA S + Sbjct: 187 GGTDLTRFSKQQLTRVQEYLAYDPNVELVLVDAYTDSY---GGRSVNQRVSDNRAESVKE 243 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + SG+ +DRI + G R +++ + NRR+ I + Sbjct: 244 FFLSSGIPQDRILTV-GHGERRHVASNEDIDERARNRRVVIRISKP 288 >gi|167619124|ref|ZP_02387755.1| OmpA family protein [Burkholderia thailandensis Bt4] gi|257138357|ref|ZP_05586619.1| OmpA family protein [Burkholderia thailandensis E264] Length = 209 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD +I P L ++ + + + G+TD + N RLSL RA + Sbjct: 86 LFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 142 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +++ G + N RR+++ V Q Sbjct: 143 VKSYLVSKGVPANKVYT-EGKGKRNPITGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 199 >gi|163800131|ref|ZP_02194032.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp. AND4] gi|159175574|gb|EDP60368.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp. AND4] Length = 356 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F + L + ++ I + GHTD N +S RA Sbjct: 218 FQFGQKKLNASQQITLAALYSYISVDERVTKILVDGHTDNV---GSQLTNLTVSRQRAEQ 274 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 Q L++ G+ + ++ ++ + NRR+ + + Sbjct: 275 VAQALIQKGMDRS-LIEVRAHGSRYPIASNKTQLGQAKNRRVTLRLVRDN 323 >gi|83312308|ref|YP_422572.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Magnetospirillum magneticum AMB-1] gi|82947149|dbj|BAE52013.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Magnetospirillum magneticum AMB-1] Length = 162 Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + FD +SS + + L + L ++ GH D N L R Sbjct: 57 DRVFFDTNSSALRSDALATLTRQAVWLRAYPNYQLTVEGHADER---GTREYNLGLGDRR 113 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339 A++ + L+ GV++ R+ IS + R ++D + +RR ++E Sbjct: 114 AHAVKRFLIAQGVAQARLKIIS-WGKERPVAFGSNDLAWAQSRRAVTVLE 162 >gi|28898406|ref|NP_798011.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD 2210633] gi|28806623|dbj|BAC59895.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD 2210633] Length = 214 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 9/114 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 +F S P ++++ + L I ++G+ + + N LS RA Sbjct: 91 RVLFANDSDEINPVFAKQIRELSDFLKEYPSTSIELQGYASRT---GGSEHNLDLSKRRA 147 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDRQG 343 + + L+++G++ DR+ I G+ + + NRR+ V +G Sbjct: 148 ENVRKALLQNGITPDRV-TIVGYGDTV-LATTGTDEVSHALNRRVTATVVGHKG 199 >gi|170724840|ref|YP_001758866.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908] gi|169810187|gb|ACA84771.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908] Length = 201 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 Q +F S P ++ I + +I GH + N LS Sbjct: 73 QELKILFPNDSYYIDPMYYDQVEIIATFMRQFPNTKVTIEGHCSKT---GSYEHNLALSQ 129 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 +RA + L + G+ DR++ I G++ R S+ + NRR+ Sbjct: 130 NRANAVTTALSERFGIEPDRLTAI-GYSFDRPIDLSETAMAHTRNRRV 176 >gi|71065432|ref|YP_264159.1| OmpA/MotB [Psychrobacter arcticus 273-4] gi|71038417|gb|AAZ18725.1| probable OmpA/MotB [Psychrobacter arcticus 273-4] Length = 211 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 26/185 (14%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + ++++ ++ Q +A + + + + F ++ I++ D Sbjct: 32 QNTYAEIKHKQVMENSQQSDRQKIATLLEDIQTSVATQGAGNLIDFNMEQS--KITLKDN 89 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNI------ 280 F + S+ PE I + + S I + GHTD P Sbjct: 90 V----FARGSACITPEAKTAFNNIEDKITSFLQQSSNAKIFVEGHTDNIPVSQPVTDYRR 145 Query: 281 ----ARDNWRLSLDRAYSAYQVLMKSGVS---EDRISKISGFAHHRLKIASDPMNSANRR 333 DN+ LS RA A ++L+ + RI ++G+ + P + ANRR Sbjct: 146 FCTVYDDNYTLSAARAREARKLLVGQ-LDTSIAKRIV-VAGYGDSQPIKGISPEDDANRR 203 Query: 334 IDILV 338 +++ + Sbjct: 204 VEVRL 208 >gi|329755856|gb|AEC04325.1| outer membrane protein A [Pasteurella multocida] Length = 354 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ + F + P VL I +A Sbjct: 211 VTAGLSYRFGQSVFVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 270 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 271 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 326 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V+ + Sbjct: 327 CDSVKGRKALIACLADDRRVEIAVKGNK 354 >gi|315605392|ref|ZP_07880435.1| OmpA family protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312961|gb|EFU61035.1| OmpA family protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 184 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 36/113 (31%), Gaps = 8/113 (7%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 +I F+ S +L E +S+ GHTD+ N Sbjct: 73 TITTLSGDVNFEVDSDQLTARAREILDSLASEWSKTKPSKVSVTGHTDSV---ADDAHNL 129 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 LS RA + L V I+ G ++ + NRR++I Sbjct: 130 DLSKRRAKAVGDYLASK-VPGLSITT-DGKGEAEPIADNETDEGRAQNRRVEI 180 >gi|322417797|ref|YP_004197020.1| hypothetical protein GM18_0255 [Geobacter sp. M18] gi|320124184|gb|ADW11744.1| conserved repeat domain protein [Geobacter sp. M18] Length = 2257 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 9/126 (7%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF----RN 279 +S+ P F + E L ++ E+L I + GHTD RN Sbjct: 817 QVSLPPVVLHPHFPTFGAELSGEDRKELDRLAELLRRFDINHIEVTGHTDLVRIAPRSRN 876 Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 I +N LS RA S + L + + + + ++G ++ + + NRR+++ Sbjct: 877 IYANNTALSFARARSVGRYLTAALHLPPESLD-LTGRGEREPVASNGMEAGRAQNRRVEV 935 Query: 337 LVEDRQ 342 V Q Sbjct: 936 KVSLSQ 941 >gi|256828401|ref|YP_003157129.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum DSM 4028] gi|256577577|gb|ACU88713.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum DSM 4028] Length = 179 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 7/107 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + F S+ E+ VL E+L + + I GH D N L R Sbjct: 72 DKIYFAFDSNELTQESRQVLTDKAELLKANPALSLLIEGHCDER---GTNEYNLALGERR 128 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 A +AY+ L+ G+ ++ IS + + +++ NRR + Sbjct: 129 ARAAYEFLVLLGIDSSKLQIIS-YGEEYPAVQGSNEDAWGKNRRDEF 174 >gi|227356882|ref|ZP_03841261.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906] gi|227162952|gb|EEI47897.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906] Length = 368 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288 R+ +F+ + S E L + LA+ + + G+TD N LS Sbjct: 240 RSDVLFNYNKSSLKAEGQEALNGLYNELANIDPTQGRVVVIGYTDRI---GSQNYNLPLS 296 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ + IS G + +A +RR++I Sbjct: 297 EKRAQSVVDYLVSKGIPANSISA-EGRGKENPVTGNTCDNVKARAALIDCLAPDRRVEIE 355 Query: 338 VED 340 ++ Sbjct: 356 IQG 358 >gi|152980803|ref|YP_001354158.1| peptidoglycan-associated lipoprotein [Janthinobacterium sp. Marseille] gi|151280880|gb|ABR89290.1| peptidoglycan-associated lipoprotein [Janthinobacterium sp. Marseille] Length = 169 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S I PE V++ + L + I +G+TD A N L RA + Sbjct: 69 FDFDSYIVKPEFQQVVENHAKYLKSNQGRKIIIQGNTDDR---GGAEYNLALGQKRAEAV 125 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 + L GV E ++ +S + K + + + NRR DI+ Sbjct: 126 RKSLSLLGVPETQMEAVS-LGKEKPKALGSDEAAWAENRRADIV 168 >gi|78484704|ref|YP_390629.1| OmpA/MotB [Thiomicrospira crunogena XCL-2] gi|78362990|gb|ABB40955.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2] Length = 241 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 28/164 (17%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTP--MFDKSSSIPLPETIVVLQKIGEVL 259 L + + T GI I++ ++ + +F + P + + + L Sbjct: 68 ALETQQRLGMNWLHIENTLSKGIKITMQEEVFSSQDLFASGRAKINPRYLPYINRFVGFL 127 Query: 260 AH-----------------------STEVISIRGHTDASPFRNI--ARDNWRLSLDRAYS 294 + I GHTDA+P + N+ LS RAY+ Sbjct: 128 NQLKLETFQQRHPLQVKSITRPGESFQVTVRIEGHTDATPLAKTALYQSNFELSTFRAYA 187 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 VL + + I+G+ + P +S NRR++I + Sbjct: 188 IMNVLQIYSGLPESLFSIAGYGSFHPVTRN-PYDSKNRRVEIYL 230 >gi|197284675|ref|YP_002150547.1| outer membrane protein A [Proteus mirabilis HI4320] gi|194682162|emb|CAR41796.1| outer membrane protein A [Proteus mirabilis HI4320] Length = 362 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288 R+ +F+ + S E L + LA+ + + G+TD N LS Sbjct: 234 RSDVLFNYNKSSLKAEGQEALNGLYNELANIDPTQGRVVVIGYTDRI---GSQNYNLPLS 290 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDIL 337 RA S L+ G+ + IS G + +A +RR++I Sbjct: 291 EKRAQSVVDYLVSKGIPANSISA-EGRGKENPVTGNTCDNIKARAALIDCLAPDRRVEIE 349 Query: 338 VED 340 ++ Sbjct: 350 IQG 352 >gi|159043661|ref|YP_001532455.1| peptidoglycan-associated lipoprotein [Dinoroseobacter shibae DFL 12] gi|157911421|gb|ABV92854.1| peptidoglycan-associated lipoprotein [Dinoroseobacter shibae DFL 12] Length = 175 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F S E V+ + L + ++ GH D N L R Sbjct: 65 DRVLFAVDQSTLSGEAQQVVSQQARWLMDNGAYTAVIEGHADEQ---GTQEYNLALGARR 121 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343 A + ++ GV+++R+S ++ F R + NRR ++ G Sbjct: 122 ASAVRDFMVSQGVADNRLSTVT-FGKERPIEVCSEERCYAQNRRAVTVLSAAPG 174 >gi|108763487|ref|YP_633317.1| OmpA family protein [Myxococcus xanthus DK 1622] gi|108467367|gb|ABF92552.1| OmpA family protein [Myxococcus xanthus DK 1622] Length = 171 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 17/122 (13%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----------STEVISIRGHTDASPFRNI 280 ++N F ++ L+K+ L + + GHTD++ Sbjct: 53 RQNQCSFKTGTAQLDAGCEAKLKKLTNALVDAKKQLVAAGVKSYKFEVSGHTDST---GD 109 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN--SANRRIDIL 337 A N +LS RA + + L+ G+ I + G+ + + D + NRR ++ Sbjct: 110 AAKNKKLSEQRAETIVKELIARGIPRGEIIAV-GYGSEKPLVKPDDTAAKKAKNRRYELQ 168 Query: 338 VE 339 V Sbjct: 169 VR 170 >gi|271501514|ref|YP_003334540.1| OmpA domain-containing protein transmembrane region-containing protein [Dickeya dadantii Ech586] gi|270345069|gb|ACZ77834.1| OmpA domain protein transmembrane region-containing protein [Dickeya dadantii Ech586] Length = 354 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L+ + + G TD + N LS Sbjct: 226 KSDVLFNFNKATLKPEGQRSLDQLYTQLSTLDPKDGSVVVLGFTDRL---GSDQYNQTLS 282 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA + L+ G+ ++IS G A+ +A +RR++I Sbjct: 283 AKRAQTVVDYLVHKGIPSNKISA-RGMGKANPVTGSTCANVKARAALIECLSPDRRVEIE 341 Query: 338 VED 340 V+ Sbjct: 342 VKG 344 >gi|119356692|ref|YP_911336.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354041|gb|ABL64912.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266] Length = 162 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 +D SS+ E L + + + + I I+GH D + N L R Sbjct: 57 GDVFYDFDSSLLSSEAQEQLTRNSGWMKSNVQAAIIIQGHCDDR---GTSEYNLALGDRR 113 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 A SA + L+++G++ RI I+ F R S + NRR +++ Sbjct: 114 AVSAREFLIRTGIASSRIETIT-FGEERPFSTSQSEEGLAKNRRAHFVIK 162 >gi|260219497|emb|CBA26342.1| Peptidoglycan-associated lipoprotein [Curvibacter putative symbiont of Hydra magnipapillata] Length = 167 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWR 286 + T FD S + E L+ + L + +SI GHTD N Sbjct: 57 LSAALKTVYFDYDSFVIRSEFQATLEAHAKYLKADKSRKVSIEGHTDER---GGREYNLA 113 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 L RA + + L GVS+ ++ IS + + + + + NRR + Sbjct: 114 LGQKRAEAVRKALQLQGVSDAQMEAIS-YGKEKPAVLGNSEAALEKNRRAEF 164 >gi|90022072|ref|YP_527899.1| putative outer membrane protein [Saccharophagus degradans 2-40] gi|89951672|gb|ABD81687.1| OmpA/MotB [Saccharophagus degradans 2-40] Length = 322 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 9/115 (7%) Query: 231 QRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRL 287 +R F+ + + P L KI ++ H + + I GHTD+ +N L Sbjct: 179 KRTALYFEPGETDVLSPGLQRQLDKILALVKHDNKLRMFYIDGHTDS---NGDRAENLEL 235 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 S RA L + G+ ED I I ++ + NRR+ + +E Sbjct: 236 SKTRAELVSTYLKRRGIPEDWIV-IRWHGERYPVASNATVNGRARNRRVTVRLER 289 >gi|329755860|gb|AEC04327.1| outer membrane protein A [Pasteurella multocida] gi|329755868|gb|AEC04331.1| outer membrane protein A [Pasteurella multocida] gi|329755870|gb|AEC04332.1| outer membrane protein A [Pasteurella multocida] gi|329755872|gb|AEC04333.1| outer membrane protein A [Pasteurella multocida] Length = 348 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ F + P VL I +A Sbjct: 205 VTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 264 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 265 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 320 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V+ + Sbjct: 321 CDSVKGRKALIACLADDRRVEIAVKGNK 348 >gi|330994155|ref|ZP_08318083.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1] gi|329758622|gb|EGG75138.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1] Length = 411 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTD---ASPFRNIARDNWRLSLD 290 FD S ++ + T I + G+TD A P N LSL Sbjct: 302 VFFDWDRSDLTDRARAIVAVAAQASTNTQTTRIEVNGYTDNSAARPGPQGEHYNQALSLK 361 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 RA L++ GV I I G+ + + + + NRR++I++ Sbjct: 362 RAQVIKAELVRDGVPGPAID-IHGYGDANPLVQTGANTREAQNRRVEIIL 410 >gi|330830631|ref|YP_004393583.1| major outer membrane protein ompAII [Aeromonas veronii B565] gi|328805767|gb|AEB50966.1| Major outer membrane protein ompAII [Aeromonas veronii B565] Length = 333 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 26/128 (20%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289 + +F S PE + L + + + + G+TD N +LS Sbjct: 210 SDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRI---GSDAYNLKLSE 266 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---------------RRI 334 RA + L+ G+ ++ I G N RR+ Sbjct: 267 ARARTVADFLVGKGLPAGKV-AIEGRGEANPV----TGTQCNSVKGKAQLISCLAPDRRV 321 Query: 335 DILVEDRQ 342 ++ V Q Sbjct: 322 EVRVTGVQ 329 >gi|117618219|ref|YP_855821.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559626|gb|ABK36574.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 333 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 26/128 (20%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289 + +F S PE + L + + + + G+TD N +LS Sbjct: 210 SDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRI---GSDAYNLKLSE 266 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---------------RRI 334 RA + L+ G+ ++ I G N RR+ Sbjct: 267 ARARTVADFLVGKGLPAGKV-AIEGRGEANPV----TGTQCNGIKAKAQLISCLAPDRRV 321 Query: 335 DILVEDRQ 342 ++ V Q Sbjct: 322 EVRVTGVQ 329 >gi|270159822|ref|ZP_06188478.1| peptidoglycan-associated lipoprotein [Legionella longbeachae D-4968] gi|289165420|ref|YP_003455558.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL) [Legionella longbeachae NSW150] gi|269988161|gb|EEZ94416.1| peptidoglycan-associated lipoprotein [Legionella longbeachae D-4968] gi|288858593|emb|CBJ12474.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL) [Legionella longbeachae NSW150] Length = 175 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S P+ + + E L + + GHTD N L RA + Sbjct: 70 LFSYDDSNLAPKYLPSVNAQAEYLKTHPGARVLLAGHTDER---GSREYNVALGERRANT 126 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342 +L +GV+ +I ++ + R D ++ NRR++ E + Sbjct: 127 VADILRMAGVNRQQI-RVVSYGKERPINLGHDDASHAQNRRVEFTYEATR 175 >gi|255527288|ref|ZP_05394168.1| conserved hypothetical protein [Clostridium carboxidivorans P7] gi|255509026|gb|EET85386.1| conserved hypothetical protein [Clostridium carboxidivorans P7] Length = 107 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + N W + Y+DFMT+LM F+V++ ++ D + Q + Sbjct: 2 KKKKQEEHENSERWLLSYSDFMTLLMILFVVLYAMSNVDKAKFSQLSQSMSIAMGGGKIM 61 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 S N D +E ++ Sbjct: 62 QGNENSPNISNSSPSGNSSDGKTEESKMED 91 >gi|159043677|ref|YP_001532471.1| OmpA/MotB domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911437|gb|ABV92870.1| OmpA/MotB domain protein [Dinoroseobacter shibae DFL 12] Length = 212 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + S E L + + E S+ GHTD A N RL RA + Sbjct: 69 FAFNQSTLTSEARAALDVQADFIKQFPELRFSVFGHTD---LVGSAAYNRRLGQARATTV 125 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L+ GV +++ + + + + NRR Sbjct: 126 VNYLVSRGVQPEQLQALVSLGETQPLVVTQDREMRNRR 163 >gi|325473749|gb|EGC76938.1| OmpA family protein [Treponema denticola F0402] Length = 440 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ ++ L L +I ++L S E + GHT + LS +RA + Sbjct: 338 FEPDKAVLLKGEEAKLDEIAKILKKSESEFFFVEGHTADV---GKPEEEKILSQERAKTV 394 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 + L+K G+ ++ G + + + NRR++I + Sbjct: 395 IEKLVKRGIPAEKFI-YQGAGGTKPIAPNGTEEGRAQNRRVEITI 438 >gi|126727642|ref|ZP_01743474.1| OmpA family protein [Rhodobacterales bacterium HTCC2150] gi|126703058|gb|EBA02159.1| OmpA family protein [Rhodobacterales bacterium HTCC2150] Length = 199 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +F + +L + S I GHTD+ N RLS +RA + Sbjct: 101 LFATDRYRITSKGRALLADFFN--SSSAAAYVIVGHTDSR---ASDEYNMRLSQNRANAV 155 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 V G R+ I + + + NRR++I+ Sbjct: 156 ANVASSLG---ARVVDIRHYGERMPRATNRTAAGRQANRRVEIM 196 >gi|52425273|ref|YP_088410.1| OmpA protein [Mannheimia succiniciproducens MBEL55E] gi|52307325|gb|AAU37825.1| OmpA protein [Mannheimia succiniciproducens MBEL55E] Length = 368 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 16/118 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + PE L I +A +S+ G+ D N +LS RA + Sbjct: 255 FAFGKATLKPEASASLDNIYGEIAQVQSPAVSVAGYADRI---GKEAANLKLSQRRAETV 311 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILVEDRQ 342 L+ GV+++ I+ +G+ + + +RR+++ V+ + Sbjct: 312 ANYLVSKGVAQNAITA-TGYGEANPVTGNTCDAVKGRKALIACLAPDRRVEVSVQGTK 368 >gi|227111637|ref|ZP_03825293.1| outer membrane protein A [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 361 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + E L ++ L+ + + G TD + N LS Sbjct: 233 KSDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRL---GSEQYNQGLS 289 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA S L+ G+ +++S G + + +A +RR++I Sbjct: 290 EKRAQSVVDYLVAKGIPANKVSA-RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIE 348 Query: 338 VED 340 V+ Sbjct: 349 VKG 351 >gi|113460409|ref|YP_718471.1| peptidoglycan-associated outer membrane lipoprotein (outer membrane protein P6) [Haemophilus somnus 129PT] gi|112822452|gb|ABI24541.1| peptidoglycan-associated outer membrane lipoprotein (outer membrane protein P6) [Haemophilus somnus 129PT] Length = 135 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 7/134 (5%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ + + + + + + NT F+ S E +L L + Sbjct: 1 MAACSSSDNASKTNAQMFGGYSVTDLQQRYNTVYFEFDSYDVQGEYAQILDAHSAYLKST 60 Query: 263 T-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL- 320 + + GH D N L L RA + L+ GV ++S +S + + Sbjct: 61 PASKVLVEGHADER---GTPEYNMALGLRRADAVKNFLLNKGVQASQLSTLS-YGEEKPA 116 Query: 321 -KIASDPMNSANRR 333 ++ S NRR Sbjct: 117 ELGHNEAAYSKNRR 130 >gi|146292701|ref|YP_001183125.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32] gi|145564391|gb|ABP75326.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32] Length = 289 Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 8/106 (7%) Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + + L ++ E LA+ V + + +TD+ N R+S +RA S + Sbjct: 187 GGTDLTRFSKQQLTRVQEYLAYDPNVELVLVDAYTDSY---GGRSVNQRVSDNRAESVKE 243 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 + SG+ +DRI + G R +++ + NRR+ I + Sbjct: 244 FFLSSGIPQDRILTV-GHGERRHVASNEDIDERARNRRVVIRISKP 288 >gi|94496180|ref|ZP_01302758.1| OmpA/MotB [Sphingomonas sp. SKA58] gi|94424359|gb|EAT09382.1| OmpA/MotB [Sphingomonas sp. SKA58] Length = 172 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 8/111 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + F E LQ L + ++I GH D N L R Sbjct: 65 DRIFFGLDQYDVDAEDQATLQSQAAWLQQNPSVRVTIEGHADER---GTRDYNIALGERR 121 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILVE 339 A +A L G+ RI+ +S + R + + + NRR + + ++ Sbjct: 122 ANAAKNYLASLGIDPGRITTVS-YGKERPAALGSDEAAWAQNRRAVTVTIQ 171 >gi|46397579|gb|AAS91718.1| OmpA [Bibersteinia trehalosi] gi|46397584|gb|AAS91722.1| OmpA [Bibersteinia trehalosi] gi|46397589|gb|AAS91726.1| OmpA [Bibersteinia trehalosi] gi|46397594|gb|AAS91730.1| OmpA [Bibersteinia trehalosi] Length = 360 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + L + + T I + G+TD N LS Sbjct: 237 SDVLFDFGKANLKSAAKQSLDAAHAEIQNLGLATPAIQVNGYTDRI---GKDAPNLALSQ 293 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA S ++ GV+ + I+ + G+ + + +RR+++ V Sbjct: 294 RRAESVANYMVSKGVAPESITAV-GYGKANPVTGNTCDAVKGRKALIACLAPDRRVELQV 352 Query: 339 EDRQ 342 + + Sbjct: 353 QGSK 356 >gi|85373329|ref|YP_457391.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594] gi|84786412|gb|ABC62594.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594] Length = 167 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 8/117 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 + + FD LQ+ + L+ +I GH D N Sbjct: 55 QQMGGKEIIYFDTDRFNIDDIDAAALQQQAQWLSQYPGKRATIEGHADER---GTREYNL 111 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR-IDILVE 339 L RA +A L G+ R+ + + R + S NRR + + ++ Sbjct: 112 ALGERRANAAKNYLASLGIDTSRL-SVISYGEERPVALGSDQAAWSQNRRAVTVTID 167 >gi|332296685|ref|YP_004438607.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168] gi|332179788|gb|AEE15476.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168] Length = 475 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 11/128 (8%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDA 274 E T+ G+ +S+ D R F S+ L E L I ++L + + + GHT + Sbjct: 356 EIEDTQQGLRLSVRDIR----FRPDSAEILSEESWRLDAIADMLRSEPDAVYLVEGHTAS 411 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 +LS++RA + L+ G +++ +G+ R + + NR Sbjct: 412 V---GKPEGEKKLSVERAQAVVAALVSRGFRKEQFL-FTGYGGTRSVADNGTAAGRAENR 467 Query: 333 RIDILVED 340 R++I + Sbjct: 468 RVEITILR 475 >gi|241662342|ref|YP_002980702.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12D] gi|240864369|gb|ACS62030.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12D] Length = 173 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S PE +L + L + I+G+TD + N L RA + Sbjct: 73 FDFDSYSVKPEYQGLLGQHSRYLQSHNQRKVLIQGNTDER---GTSEYNLALGQKRAEAV 129 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV + ++ +S + + + + NRR DI+ Sbjct: 130 RRALSSMGVPDSQMEAVS-LGKEKPQATGHDEDSWAQNRRADIV 172 >gi|157962384|ref|YP_001502418.1| peptidoglycan-associated lipoprotein [Shewanella pealeana ATCC 700345] gi|157847384|gb|ABV87883.1| Peptidoglycan-associated lipoprotein [Shewanella pealeana ATCC 700345] Length = 179 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 7/156 (4%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + + S + V V VL + + + + + FD S Sbjct: 27 ESETDATSSTESSSSSEYANNGVETGGVAPVLTPQEQQRLKYQELRKEHIIYFDFDRSSV 86 Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + +L G+ L + I GH D N L RA + + L G Sbjct: 87 SQQFAEILDAHGDYLVEHPNVRVMIEGHADER---GTPEYNIALGERRAKAVAKYLQGMG 143 Query: 304 VSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 V ++S +S + + SD + NRR ++ Sbjct: 144 VQPSQMSIVS-YGEEKPLDFSRSDDGFAKNRRAVLV 178 >gi|121601320|ref|YP_993883.1| OmpA family protein [Burkholderia mallei SAVP1] gi|167720677|ref|ZP_02403913.1| ompA family protein [Burkholderia pseudomallei DM98] gi|167739663|ref|ZP_02412437.1| ompA family protein [Burkholderia pseudomallei 14] gi|167816870|ref|ZP_02448550.1| ompA family protein [Burkholderia pseudomallei 91] gi|167846773|ref|ZP_02472281.1| ompA family protein [Burkholderia pseudomallei B7210] gi|167895360|ref|ZP_02482762.1| ompA family protein [Burkholderia pseudomallei 7894] gi|167903747|ref|ZP_02490952.1| ompA family protein [Burkholderia pseudomallei NCTC 13177] gi|254192034|ref|ZP_04898534.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] gi|121230130|gb|ABM52648.1| OmpA family protein [Burkholderia mallei SAVP1] gi|157987856|gb|EDO95621.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] Length = 209 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ P L ++ + + + G+TD + N RLSL RA + Sbjct: 86 LFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 142 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +++ G + N RR+++ V Q Sbjct: 143 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 199 >gi|146306467|ref|YP_001186932.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp] gi|145574668|gb|ABP84200.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 217 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 11/170 (6%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 K+++ Q + L FE ++++ Sbjct: 19 AGSEKKEVAKAAVMPPPQVTRAWLDEYEPKLREAVKGSHFEFERRENLLVVT---APVQG 75 Query: 236 MFDKSS-SIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAY 293 F+ + LP ++ + ++ ++L ++ + GH D+ A N LS RA Sbjct: 76 SFNPDRPHMLLPVSLGPITRVAKLLESDEDMAVVVLGHADS---SGDATRNRELSDQRAR 132 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + + SG+ ++R+ ++ G + A+D NRR++IL+ R Sbjct: 133 AVTSIFRLSGLKQNRL-QVMGLGSDMPRAANDSAAGRALNRRVEILLTSR 181 >gi|159042678|ref|YP_001531472.1| OmpA/MotB domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157910438|gb|ABV91871.1| OmpA/MotB domain protein [Dinoroseobacter shibae DFL 12] Length = 310 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++ L + L + + VI++ GHTDA N LS+ RA + Sbjct: 206 FATGNATLENGQYPSLTALAGFLTENPDLVIALVGHTDAE---GSIDANLALSMRRAEAV 262 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 L+ GV+ +R+ + G + + + NRR++ ++ Sbjct: 263 RDRLVADYGVASERL-RAEGVGYLAPRATNRTEEGRRANRRVEAVLTQP 310 >gi|305664380|ref|YP_003860667.1| OmpA family protein [Maribacter sp. HTCC2170] gi|88708397|gb|EAR00633.1| OmpA family protein [Maribacter sp. HTCC2170] Length = 646 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q +T FD ++ + +QK+ + I + HTD+ N LS Sbjct: 533 QLSTIYFDFDKYNIRSDSEIEIQKVIAAMEKYPSLKIKVNSHTDSR---GRDAYNLWLSQ 589 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-------MNSANRRIDILVED 340 RA S ++ G+ E R+ GF +L + NRR + ++ + Sbjct: 590 KRAESTVNYMISKGILESRLL-GEGFGETKLINKCANGVRCFGIEHEKNRRSEFIILE 646 >gi|238020123|ref|ZP_04600549.1| hypothetical protein VEIDISOL_02007 [Veillonella dispar ATCC 17748] gi|237863647|gb|EEP64937.1| hypothetical protein VEIDISOL_02007 [Veillonella dispar ATCC 17748] Length = 366 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + L + I + G+ D + N LS R Sbjct: 264 FDSDQDVARADQYPNLTAAVNAANQYSQDQIKLLGNADTDATP---QYNVGLSERRVQYV 320 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 Q L+ +GVS DR I+ + + + NRR+D+ + Sbjct: 321 AQYLVNNGVSADRFIGIA-NGDTKPVATNSTAAGKAENRRVDVYIHR 366 >gi|332882695|ref|ZP_08450307.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679495|gb|EGJ52480.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 344 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 12/111 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + V L KI L V I+ HTD+ N LS +A Sbjct: 238 FDYGRINIRYDASVQLAKIVTFLEEHPNVRLDIKVHTDSR---GDDDYNMSLSNTQAKVI 294 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVE 339 Q L+ G+S +R++ G+ + ++ + AN+R++ +V+ Sbjct: 295 EQWLIDKGISRNRLTA-KGYGETQPVNGCENGVPCTEEQHQANKRVEFIVK 344 >gi|255020134|ref|ZP_05292204.1| peptidoglycan-associated outer membrane lipoprotein [Acidithiobacillus caldus ATCC 51756] gi|254970427|gb|EET27919.1| peptidoglycan-associated outer membrane lipoprotein [Acidithiobacillus caldus ATCC 51756] Length = 193 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + + + + + + + G+TD N L RA + Sbjct: 86 FGFNSDSLDARAQEIASQNAQFMMNHAHVKVRLEGNTDDR---GTQEYNLALGERRAEAV 142 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK-IASDPM-NSANRRIDIL 337 + L GVS RIS +S F +D + NRR+D + Sbjct: 143 KRYLEAQGVSAARISTVS-FGKDNPLCNQNDESCWAKNRRVDFV 185 >gi|269968783|ref|ZP_06182772.1| outer membrane protein, putative [Vibrio alginolyticus 40B] gi|269826595|gb|EEZ80940.1| outer membrane protein, putative [Vibrio alginolyticus 40B] Length = 213 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 9/123 (7%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARD 283 + S + + +F S + P ++++ + L I I+G+ + A Sbjct: 81 VDSSQEMQIRVLFANDSDVINPIFTQQIRELSDFLKEYPNTSIEIQGYASRT---GTAEH 137 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM---NSANRRIDILVED 340 N LS RA + + LM +G+S DR+ I G+ ++ NRR+ V Sbjct: 138 NLDLSKRRAENVRKELMTNGISGDRV-TIVGYGDTV-LATQGTDQVSHALNRRVTATVIG 195 Query: 341 RQG 343 +G Sbjct: 196 HKG 198 >gi|156319761|ref|XP_001618159.1| hypothetical protein NEMVEDRAFT_v1g225448 [Nematostella vectensis] gi|156197754|gb|EDO26059.1| predicted protein [Nematostella vectensis] Length = 294 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 12/110 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + S + + L KI EV+ + + +R HTD+ A N LS RA + Sbjct: 186 FDLNKSNIRKDAALELAKIVEVMKENPSIKVDVRSHTDSRQ---SAEYNEELSDKRAKAT 242 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 ++K G+S DR++ G+ +L S+ + ANRR + +V Sbjct: 243 VAWMVKKGISADRLTA-KGYGESQLVNKCSDGVECSEEEHQANRRSEFIV 291 >gi|255020103|ref|ZP_05292174.1| outer membrane protein [Acidithiobacillus caldus ATCC 51756] gi|254970465|gb|EET27956.1| outer membrane protein [Acidithiobacillus caldus ATCC 51756] Length = 183 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +SS L I VL ++ E + VI++ G+ N +LS RA S Sbjct: 73 FKFNSSKLLDRDIKVLDEVAEFAQKHPDAVINVNGYASKV---GTYAYNLKLSQQRAESV 129 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 + L + GV DR+ + G ++ ++ N+R++I Sbjct: 130 ARYLEQHGVPRDRMV-LKGHSYEDPIASNATPQGRFENQRVEI 171 >gi|146306425|ref|YP_001186890.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp] gi|145574626|gb|ABP84158.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp] Length = 315 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F L I + + I GH D N LS RA + Sbjct: 183 FPGGGIELDAMAKAKLDIILDFVKADPSINSFQIDGHADN---SGNRLTNRDLSRRRALA 239 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L+ GV ++I + + ++ + NRR + ++ Sbjct: 240 VQEYLVAGGVPAEQI-TVRFHGERYPLVPNNNEANRAKNRRATLRLDR 286 >gi|117923780|ref|YP_864397.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1] gi|117607536|gb|ABK42991.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1] Length = 203 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 7/188 (3%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 G ++ + E + + +++ S + + Sbjct: 18 TGCGGVPKDKPGDLRQEQMQDQYKGTTDEGQALTRPEGMAEEIGGGAGMDGSQYKSGSYY 77 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL-QKIGEVLAHSTEVISIRGH 271 + G + N F S E VL Q ++ + +SI GH Sbjct: 78 DEQSAAGSAGGTQDPMGQPENMIFFGYDSEALTYEAQTVLAQHAVAIIKGGVQSVSIEGH 137 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNS 329 D N L RA S L GV + +S + R ++ + Sbjct: 138 CDER---GTREYNLALGQKRADSVKNFLNAQGVPTTVMRTVS-YGKERPLYTGHTETSWA 193 Query: 330 ANRRIDIL 337 NRR ++ Sbjct: 194 RNRRAVLV 201 >gi|308050234|ref|YP_003913800.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] gi|307632424|gb|ADN76726.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] Length = 204 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 10/106 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S+ P ++ ++Q +G+ L + + I GHTDA N LSL RA Sbjct: 94 FDSGSARLRPSSLALVQTLGDALTDPRFNGQAFLIAGHTDAD---GDEEYNLGLSLRRAN 150 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 + L++ ++ D++ + GF ++ NRR+++ Sbjct: 151 TVRDYLLQHTSLTPDQLK-VVGFGETTPLASNHERQGKQQNRRVEV 195 >gi|46397588|gb|AAS91725.1| OmpA [Bibersteinia trehalosi] Length = 364 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + I + G+TD N LS Sbjct: 241 SDVLFDFGKANLKPAAAASLDAAHAEIQNLGLAAPAIQVNGYTDRI---GKDAPNLALSQ 297 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA S ++ GV+ + I+ + G+ + + +RR+++ V Sbjct: 298 RRAESVANYMVSKGVAPESITAV-GYGKANPVTGNTCDAVKGRKALIACLAPDRRVELQV 356 Query: 339 EDRQ 342 + + Sbjct: 357 QGSK 360 >gi|83594657|ref|YP_428409.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170] gi|9408182|emb|CAB99313.1| porin-assoziated protein (PAP) [Rhodospirillum rubrum] gi|83577571|gb|ABC24122.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170] Length = 273 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 28/219 (12%), Positives = 65/219 (29%), Gaps = 10/219 (4%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 N + Q + +L + + P Sbjct: 59 DDTAYYTNKAKLAAAGQTPAPTAMAERELGSYTGELTAARSALVTALGAGAPSSNPTVAA 118 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 K + + + + + ++S + F S Sbjct: 119 KAQTSFDCWAEEAEEDRQPEHIRECKQNFEIAMNALGGAPAPAVVS---EGFKVFFALDS 175 Query: 242 SIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + PE+ L ++ + L+ S + + G+ D A N LS RA + + L Sbjct: 176 ARLSPESEATLDRVSQAFLSGSPASVMVVGYADT---SGPADYNILLSQRRAEAVARGLA 232 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 + G++ + + + + RL + + NRR++++ Sbjct: 233 QRGIASE-VLTLEAYGEERLAVPTADGVVEQQNRRVEVV 270 >gi|221200412|ref|ZP_03573454.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] gi|221206092|ref|ZP_03579106.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221174104|gb|EEE06537.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2] gi|221179753|gb|EEE12158.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M] Length = 159 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD P+ ++++IG L + + + + G+TD + LS R Sbjct: 52 GPILFDFDRYNLKPDVRRIVERIGRTLHSAGIDGVRVYGYTDDE---GTDAYDMELSRRR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A L+ G+ RI I G H + + NRR I+V R Sbjct: 109 AEVVAIELVDVGLDARRI-AIVGRGKHDPVGDNRMPVGRAQNRRAAIVVSPR 159 >gi|319427140|gb|ADV55214.1| OmpA/MotB domain protein [Shewanella putrefaciens 200] Length = 197 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 8/111 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 F+ + + L + L + +V I GHTD N++LSL RA Sbjct: 91 VYFEFAIAEVDLSQWKSLALVKAFLEANNDVALILVGHTD---IVGTPEFNYQLSLQRAE 147 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + ++L++ G + +R I G + NRR+ +V ++ Sbjct: 148 NVRRILVEDYGFNPNRF-TIVGKGISEPVADNRSSEGRRLNRRVQFIVNNK 197 >gi|288959500|ref|YP_003449841.1| ompA/MotB domain protein [Azospirillum sp. B510] gi|288911808|dbj|BAI73297.1| ompA/MotB domain protein [Azospirillum sp. B510] Length = 416 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 8/118 (6%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS-PFRNIAR 282 ++I I MF +++++G+ LA + + HTD P Sbjct: 301 LVIRI---PAAAMFATGGDAVKARHRAIVERVGQTLAAEPGGVLVVAHTDDQSPTTGRLP 357 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 L+ RA + ++L +S + R+S G +D NRRIDI + Sbjct: 358 TGQALTDARAEAVRRLLERS-IPPARLSA-EGHGDQEPVALNDTPAGRDANRRIDIRL 413 >gi|260426228|ref|ZP_05780207.1| OmpA family protein [Citreicella sp. SE45] gi|260420720|gb|EEX13971.1| OmpA family protein [Citreicella sp. SE45] Length = 219 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 4/94 (4%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D + F +SS L+ + E + GHTD A N +L Sbjct: 68 DVPSMVNFAFNSSQLDAGARETLRVQAGWIRQFPEVRFRVYGHTD---LVGSASYNRQLG 124 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 L RA + L G+S R+ + + + I Sbjct: 125 LARAQAVVAYLASQGISRSRLEAVVSYGETQPLI 158 >gi|126668392|ref|ZP_01739349.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter sp. ELB17] gi|126627101|gb|EAZ97741.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter sp. ELB17] Length = 189 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 FD ++ E+ VL L+ + + + GH D + N L Sbjct: 82 DVTVFYFDFDTAEISAESRDVLVAHARYLSANPSMNARLEGHADDR---GTSEYNLALGE 138 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 RA + + L+ +G S ++ IS + + + SD S NRR++++ Sbjct: 139 RRANAVQRFLIVNGASRGQLETIS-YGEEKPAVQGMSDSARSQNRRVELIFR 189 >gi|146293768|ref|YP_001184192.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32] gi|145565458|gb|ABP76393.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32] Length = 196 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 8/111 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 F+ + + L + L + +V I GHTD N++LSL RA Sbjct: 90 VYFEFAIAEVDLSQWKSLALVKAFLEANNDVALILVGHTD---IVGTPEFNYQLSLQRAE 146 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + ++L++ G + +R I G + NRR+ +V ++ Sbjct: 147 NVRRILVEDYGFNPNRF-TIVGKGISEPVADNRSSEGRRLNRRVQFIVNNK 196 >gi|17861366|gb|AAK61593.1| OmpA [Pasteurella multocida] Length = 348 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ F + P VL I +A Sbjct: 205 VTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 264 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 265 VAVAGYTDCL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 320 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V+ + Sbjct: 321 CDSVKGRKALIACLADDRRVEIAVKGNK 348 >gi|86133957|ref|ZP_01052539.1| OmpA family protein [Polaribacter sp. MED152] gi|85820820|gb|EAQ41967.1| OmpA family protein [Polaribacter sp. MED152] Length = 370 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 11/112 (9%) Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 D SS+ ++ + + I HTD RDN LS RA + Sbjct: 263 DFSSATLNEGAKQIIDARLLPIVKDGVAVFIESHTDMR---GTKRDNQELSDRRAKAVTD 319 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDRQ 342 L+ G++ ++ GF RL S+ ++ NRR V +++ Sbjct: 320 YLISKGINATQLYA-KGFGETRLLNKCADGVVCSESEHAVNRRTTFRVVNQK 370 >gi|121604950|ref|YP_982279.1| OmpA domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120593919|gb|ABM37358.1| OmpA domain protein [Polaromonas naphthalenivorans CJ2] Length = 179 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 7/105 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S + PE V++ L A+ ++I GHTD N L RA Sbjct: 76 VYFDFDSYVVKPEFQSVIEAHARYLTANKARKMAIEGHTDEI---GGREYNLALGQKRAE 132 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 + + L GV++ ++ +S F + + + + NRR +I Sbjct: 133 AVRRALGLLGVTDSQVEAVS-FGKEKPAVPGLDEASMAKNRRAEI 176 >gi|84394101|ref|ZP_00992836.1| protein F-related protein [Vibrio splendidus 12B01] gi|84375292|gb|EAP92204.1| protein F-related protein [Vibrio splendidus 12B01] Length = 211 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 F S+ P P L +G L+ ++ + GHTD + R N LS Sbjct: 102 EQHVNFKTGSAFPEPAYNQWLDTLGSYLSQRQDIDVVIEGHTDNT---GSDRVNAPLSEL 158 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 RA L + VS R GF + + NRR+++++ Sbjct: 159 RAKEVKARLESNYVS-SRAIYTRGFGEYVPACTNASPQGKACNRRVELML 207 >gi|311103960|ref|YP_003976813.1| peptidoglycan-associated lipoprotein [Achromobacter xylosoxidans A8] gi|310758649|gb|ADP14098.1| peptidoglycan-associated lipoprotein [Achromobacter xylosoxidans A8] Length = 166 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 7/117 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 SI+ Q+ + FD S + +++ + LA + I G+TD A N Sbjct: 54 SILAQQRSVYFDFDSYTVSDQYRSLVETHAKYLASHQQQTIKIEGNTDER---GGAEYNL 110 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 L RA + +++ GVS+++I IS F + K + NRR DI+ Sbjct: 111 ALGQRRADAVRRMMTLLGVSDNQIETIS-FGKEKPKSTGTSEADFAENRRADIVYRR 166 >gi|330893498|gb|EGH26159.1| ompA family protein [Pseudomonas syringae pv. mori str. 301020] Length = 77 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 6/78 (7%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 I G+TD++ + N LS RA S L GV + + + G + ++ Sbjct: 1 IVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPDQPIASNADV 56 Query: 327 -MNSANRRIDILVEDRQG 343 + NRR+++ ++ G Sbjct: 57 NGRAQNRRVEVNLKPIPG 74 >gi|209808859|ref|YP_002264397.1| outer membrane protein OmpA family [Aliivibrio salmonicida LFI1238] gi|208010421|emb|CAQ80772.1| outer membrane protein OmpA family [Aliivibrio salmonicida LFI1238] Length = 201 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 8/138 (5%) Query: 210 NIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267 +G + + D+++ +F +SS P ++ + E LA E I Sbjct: 54 GTPRGAQIDNDGCAEYVEQSDKKDLKILFANNSSEISPIFKSEIRTMAEFLAEYPETSIQ 113 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 ++G A N RLS RA + L+ GV+ D+I I GF L D Sbjct: 114 LQGFASQQ---GNAEYNIRLSELRASAVRVALINYGVNPDKIETI-GFGDTLLTAKGDSA 169 Query: 328 --NSANRRIDILVEDRQG 343 ++ NRR+ V +G Sbjct: 170 VSHALNRRVVATVVGFKG 187 >gi|167624709|ref|YP_001675003.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167354731|gb|ABZ77344.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4] Length = 321 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 9/104 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD S + VL+ + +A I I +TD+ N LS RA + Sbjct: 224 FDSSKLVATEALAEVLKNV---IASKDTEICITAYTDSL---GAKEYNLTLSKQRAEATR 277 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + +GV RI + + NRR+ I + Sbjct: 278 SYFISNGVEPSRIH-VDWKGEASPVATNRTAEGRALNRRVKIEL 320 >gi|49182352|gb|AAT57678.1| OmpA [Pasteurella multocida] Length = 348 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ F + P VL I +A Sbjct: 205 VTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 264 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 265 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGRGEANPVTGNK 320 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V+ + Sbjct: 321 CDSVKGRKALIACLADDRRVEIAVKGNK 348 >gi|254450200|ref|ZP_05063637.1| OmpA domain protein [Octadecabacter antarcticus 238] gi|198264606|gb|EDY88876.1| OmpA domain protein [Octadecabacter antarcticus 238] Length = 656 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 + GHTD+ N LS DRA + L+ GV E+ ++ GF + + Sbjct: 579 VGGHTDS---SGDELTNNALSQDRANAVRAALIVRGVPENAMTAF-GFGPTQPITDNATP 634 Query: 327 -MNSANRRIDIL 337 +ANRR DI Sbjct: 635 EGRAANRRTDIT 646 >gi|37498966|gb|AAQ86765.2| hemagglutinin antigen [Avibacterium paragallinarum] gi|48249488|gb|AAT40990.1| hemagglutinin antigen [Avibacterium paragallinarum] Length = 345 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 ++ + F + PE VL I +A + + G+TD Sbjct: 211 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 270 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330 N +LS RA + L+ GV+++ IS +G+ D + Sbjct: 271 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDAVKGRKA 326 Query: 331 -------NRRIDILVEDRQ 342 +RR++I V+ + Sbjct: 327 LIACLADDRRVEISVKGNE 345 >gi|110833620|ref|YP_692479.1| peptidogycan-associated lipoprotein [Alcanivorax borkumensis SK2] gi|110646731|emb|CAL16207.1| Peptidogycan-associated lipoprotein [Alcanivorax borkumensis SK2] Length = 189 Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 F S+ L+ L ++ I + GH D N LS Sbjct: 78 DSRVIYFAFDSNTIPAAAFETLRAHATYLKNNANAKIRLEGHADER---GTREYNVALSE 134 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 R+ + + L GV+ ++ +S + + + NRR++I Sbjct: 135 RRSKAVEKFLRVQGVASSQLEIVS-YGEEKPAAFGHSEMDWAKNRRVEI 182 >gi|104780417|ref|YP_606915.1| OmpA/MotB family outer membrane protein [Pseudomonas entomophila L48] gi|95109404|emb|CAK14104.1| putative outer membrane protein, OmpA/MotB family [Pseudomonas entomophila L48] Length = 325 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 37/108 (34%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F + L + + L V I GH+D N S RA + Sbjct: 179 FPGAGIELDAAGRARLDVVLDYLKADPSVNHIELDGHSDN---SGNRLTNRDTSRRRALA 235 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L GV ED+I + ++ + NRR++I ++ Sbjct: 236 VAEYLKAHGVPEDQI-TVRFHGERYPLAKNNSAANRARNRRVNIQLDR 282 >gi|315637993|ref|ZP_07893178.1| chemotaxis protein MotB [Campylobacter upsaliensis JV21] gi|315481841|gb|EFU72460.1| chemotaxis protein MotB [Campylobacter upsaliensis JV21] Length = 314 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 106/326 (32%), Gaps = 47/326 (14%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83 + W I YAD M L+ F+ + +I A + +NL T + Sbjct: 3 KNNKEEGNFW-IAYADLMAGLL--FIFILLIGAI-VVKYVLTQSDLKIIKENLNTQEANL 58 Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 + + LS + + T N+++L Q Sbjct: 59 ELSKQALKDKESIVFQLSKELNATANTLNLI----------------------HTQKTEL 96 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 +N+++ S+ K+ D + I + K K K + I L Sbjct: 97 ENNISTLSKDLKNNIDEKDRQILILLNQIELKENELKAIQQDFKEAKERVENLSLIRENL 156 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK--------- 254 S + + + + + I + +FDK S I E + L+K Sbjct: 157 SKALQKKLDENISIDQKTGAISL-----PAEVLFDKDSFILKDEAKISLKKILSGYLTGI 211 Query: 255 -IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--DRISK 311 E ++ + E I I GHTD+ N LS RAY + E ++ Sbjct: 212 LDDENISKNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMSFIYSFYKDERLQKLLM 268 Query: 312 ISGFAHHRLKIASDPMN-SANRRIDI 336 SG + + + + +RRI+I Sbjct: 269 ASGRSFSVPILKNGVEDKDLSRRIEI 294 >gi|251788834|ref|YP_003003555.1| outer membrane protein A [Dickeya zeae Ech1591] gi|247537455|gb|ACT06076.1| OmpA domain protein transmembrane region-containing protein [Dickeya zeae Ech1591] Length = 355 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L+ + + G TD + N LS Sbjct: 227 KSDVLFNFNKATLKPEGQRSLDQLYSQLSSLDPKDGSVVVLGFTDRL---GSDQYNQTLS 283 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-------NRRIDIL 337 RA + L+ G+ ++IS G A+ +A +RR++I Sbjct: 284 TKRAQTVVDYLVHKGIPSNKISA-RGMGKANPVSGSTCANVKARAALIDCLAPDRRVEIE 342 Query: 338 VED 340 V+ Sbjct: 343 VKG 345 >gi|37704606|gb|AAR01575.1| OprF [Pseudomonas sp. MFY33] Length = 316 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272 V + + ++ FD S+ + ++ + + + ++ GHT Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKENSYGDIKNLADFMKQYPSTSTTVEGHT 269 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESTRVQSV-GYGESRPVA 316 >gi|332707360|ref|ZP_08427410.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L] gi|332353851|gb|EGJ33341.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L] Length = 287 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 74/211 (35%), Gaps = 10/211 (4%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + + + +L K L + L + + Sbjct: 84 EPTEANPLKQLTPVQRVQLKAQLSELDKRMKRLSEDVTMLETQLGTSGGNESLERRIQAI 143 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L + + + + + N L + +++ +F++S S PE ++ Sbjct: 144 TLLLKEPSTPSSNAPLVGNSNGNRLAALAADKLKVTLPSD---ILFEESKSTLRPEAGLI 200 Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L KI L I I HTD A++N LS +RA + Q L + + + Sbjct: 201 LDKIVTDLQAYPSSTIRIAIHTDNPR---EAKENRNLSFERAKAVQQYLSSA-LDDSYRW 256 Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVE 339 I G+ R +A+D NRR++I V+ Sbjct: 257 LIIGYGETRPLVANDTEVNQQRNRRVEIAVD 287 >gi|292491797|ref|YP_003527236.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4] gi|291580392|gb|ADE14849.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4] Length = 202 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 8/104 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F +S L ET L ++G +L E I I GHTDA N LS +RA Sbjct: 95 FALNSFEILDETRPYLDEVGRLLNMEQFKEERIIIEGHTDAQ---GSENYNNWLSQERAK 151 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 S L+ S V +R+ + G +P N NRR+++ Sbjct: 152 SVKNYLVSSFRVDPERLM-VVGRGEREPLPDLNPNNGLNRRVEL 194 >gi|261855180|ref|YP_003262463.1| peptidoglycan-associated lipoprotein [Halothiobacillus neapolitanus c2] gi|261835649|gb|ACX95416.1| peptidoglycan-associated lipoprotein [Halothiobacillus neapolitanus c2] Length = 127 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 T F P +LQ+ L +T+ + + G+TD N L Sbjct: 19 DAATVYFGFDKYNVDPSYRPMLQQNAAFLKENTQRHVLVEGNTDNR---GSREYNIALGE 75 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 RA + L+ GV+ ++ +S + R + ++ + NRR D+ Sbjct: 76 KRAVAVRDTLLADGVAPSQVDVVS-YGEERPAVEGNNEAAWAKNRRADL 123 >gi|48249486|gb|AAT40989.1| hemagglutinin antigen [Avibacterium paragallinarum] Length = 345 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 ++ + F + PE VL I +A + + G+TD Sbjct: 211 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 270 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330 N +LS RA + L+ GV+++ IS +G+ D + Sbjct: 271 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDAVKGRKA 326 Query: 331 -------NRRIDILVEDRQ 342 +RR++I V+ + Sbjct: 327 LIACLADDRRVEISVKGNE 345 >gi|71279065|ref|YP_267707.1| ompA family protein [Colwellia psychrerythraea 34H] gi|71144805|gb|AAZ25278.1| ompA family protein [Colwellia psychrerythraea 34H] Length = 352 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLS 288 D F+ +SS ET+ +Q++ + + + GH+ A A+ N LS Sbjct: 233 DVDLNVAFENNSSQIKAETMNDIQRLADFMKEYKNTSVVIEGHSSA---AGSAKYNLALS 289 Query: 289 LDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334 RA + +L+ + E R+S GF +L + NRR+ Sbjct: 290 QKRADAVKSLLINKFDIEESRLSA-KGFGETQLISKGNTAADHELNRRV 337 >gi|327404493|ref|YP_004345331.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327320001|gb|AEA44493.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 279 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 FD S PE L +I V+ T+ + + G+TDA + N LS Sbjct: 172 DFKPIYFDYDKSDIRPEFESFLNRIVYVINSHTDLRVKVTGNTDAD---GSDQYNDGLSE 228 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 RA + +K+G+ DRI I ++ NRR+D Sbjct: 229 RRAEAIIAFFVKAGLKRDRIV-IDFKGEKNPVSDNNSDEGKQLNRRVDF 276 >gi|262068311|ref|ZP_06027923.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693] gi|291377972|gb|EFE85490.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693] Length = 122 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 3/112 (2%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 K + ++I+ FD S+ P+ +L + + + + +++ GHT Sbjct: 14 KNIDITNMEAPKEMTIVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQNNYEVTLEGHT 73 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 D+ + N LS RA + L++ G++E+RI I + Sbjct: 74 DSI---GSNQYNIGLSRRRAEAVKAKLIEFGLAEERIVGIEAKGEEYPVATN 122 >gi|206580983|ref|YP_002237058.1| OmpA family protein [Klebsiella pneumoniae 342] gi|288934021|ref|YP_003438080.1| OmpA/MotB domain protein [Klebsiella variicola At-22] gi|290510919|ref|ZP_06550288.1| lipoprotein yfiB [Klebsiella sp. 1_1_55] gi|206570041|gb|ACI11817.1| OmpA family protein [Klebsiella pneumoniae 342] gi|288888750|gb|ADC57068.1| OmpA/MotB domain protein [Klebsiella variicola At-22] gi|289775912|gb|EFD83911.1| lipoprotein yfiB [Klebsiella sp. 1_1_55] Length = 160 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 ++ +FDK+ P++ + + LA + + GHTD N LSL R Sbjct: 52 DSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTDNY---GEDSYNEALSLKR 108 Query: 292 AYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A S + V + G ++D + NRR+ +++ Sbjct: 109 ANSVADAWAEGAHVPRSHLVT-RGLGKKYPIASNDTAAGRAENRRVTVVI 157 >gi|167918843|ref|ZP_02505934.1| ompA family protein [Burkholderia pseudomallei BCC215] Length = 290 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 +F + L + + S + + G+TD N RLS Sbjct: 175 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRL---GSDEHNARLSS 231 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 +RA + ++ G+ +I+ + G + + NRR++I ++ + Sbjct: 232 ERARTVADYMIAEGIPAAKITAV-GRGAAEPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 290 >gi|260060612|ref|YP_003193692.1| OmpA family protein [Robiginitalea biformata HTCC2501] gi|88784742|gb|EAR15911.1| OmpA family protein [Robiginitalea biformata HTCC2501] Length = 623 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 4/105 (3%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + + + F + SS E LQ+ + L I I HTD+ Sbjct: 490 SVDEVVRSVRERQELKAEKFYFGRGSSRLTDEIRTALQEPLQALRDFPGLHIRIEAHTDS 549 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + N LS RA + L+++G+ +RI I GF + Sbjct: 550 R---GSEQANLSLSRQRAEAIRDYLVENGIDAERIEGIEGFGESQ 591 >gi|330447358|ref|ZP_08311007.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491549|dbj|GAA05504.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 200 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 17/147 (11%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 ++ + S + V +N R + I+ F S++ P+ Sbjct: 46 IEAREQCAKSAVGAEVDNNGCSSQSEYIVRRDLHIN---------FANDSAVVEPQYQGQ 96 Query: 252 LQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRI 309 + K+ + + ++I GHT N LS RA + L G+S +RI Sbjct: 97 IAKLADFMKQYPASKVTIEGHTSKV---GRYDYNMVLSQRRAENVATDLEHQFGISANRI 153 Query: 310 SKISGFAHHRLKIASDPMNS--ANRRI 334 I G+ + L + NRRI Sbjct: 154 KAI-GYGYTHLLDTGMTEEANQKNRRI 179 >gi|289676756|ref|ZP_06497646.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5] gi|330898576|gb|EGH29995.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT] gi|330981564|gb|EGH79667.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 300 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 33/108 (30%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L + L V I GH+D N LS RA + Sbjct: 178 FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 G+ E +I + ++ + NRR+++ +E Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLAPNTNEANRARNRRVNVHLER 281 >gi|254418180|ref|ZP_05031904.1| peptidoglycan-associated lipoprotein, putative [Brevundimonas sp. BAL3] gi|196184357|gb|EDX79333.1| peptidoglycan-associated lipoprotein, putative [Brevundimonas sp. BAL3] Length = 184 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 33/103 (32%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD S E + L + L + + I G+ D N L R Sbjct: 74 DRIYFDLDSYDVRSEAMPRLDAQAQWLQRYPQVTVRIEGNADER---GTREYNLALGARR 130 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 A + L+ GV RI IS + R + NR Sbjct: 131 AEAVRTYLINRGVPAGRIDTIS-YGKERPIAEGSSEDSWARNR 172 >gi|46397578|gb|AAS91717.1| OmpA [Bibersteinia trehalosi] gi|46397583|gb|AAS91721.1| OmpA [Bibersteinia trehalosi] Length = 364 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + I + G+TD N LS Sbjct: 241 SDVLFDFGKANLKPAAAASLDAAHAEIQNLGLAAPAIQVNGYTDRI---GKDAPNLALSQ 297 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA S ++ GV+ + I+ + G+ + + +RR+++ V Sbjct: 298 RRAESVANYMVSKGVAPESITAV-GYGKANPVTGNTCDAVKGRKALIACLAPDRRVELQV 356 Query: 339 EDRQ 342 + + Sbjct: 357 QGSK 360 >gi|46397593|gb|AAS91729.1| OmpA [Bibersteinia trehalosi] Length = 364 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + I + G+TD N LS Sbjct: 241 SDVLFDFGKANLKPAAAASLDAAHAEIQNLGLAAPAIQVNGYTDRI---GKDAPNLALSQ 297 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA S ++ GV+ + I+ + G+ + + +RR+++ V Sbjct: 298 RRAESVANYMVSKGVAPESITAV-GYGKANPVTGNTCDAVKGRKALIACLAPDRRVELQV 356 Query: 339 EDRQ 342 + + Sbjct: 357 QGSK 360 >gi|56697940|ref|YP_168311.1| peptidoglycan-associated lipoprotein [Ruegeria pomeroyi DSS-3] gi|56679677|gb|AAV96343.1| peptidoglycan-associated lipoprotein [Ruegeria pomeroyi DSS-3] Length = 181 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + +F S PE L + L +T+ +I GH D N L R Sbjct: 71 DRVLFAVDQSTLGPEAQATLGAQAQWLLTNTDYTATIEGHADEQ---GTREYNLALGARR 127 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341 A +A + L+ GV+ R+ +S + R + + S NRR ++ Sbjct: 128 ANAAREFLISRGVAGSRLKTVS-YGKERPIEICSDEACYSKNRRAVTVLTTD 178 >gi|332877757|ref|ZP_08445498.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684337|gb|EGJ57193.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 660 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 FD + + + L KI +V+ + +R HTD+ + N LS Sbjct: 546 NIENIYFDYNKANIRKDAAEQLAKIVKVMQEHPTMTVDVRLHTDSR---GSDKYNLALSQ 602 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 RA S + + G+ ++RI G+ +L ++ + ANRR + ++ Sbjct: 603 RRAKSTIKWITSHGIKKNRI-TGKGYGETQLVNECSNGVPCTEEQHQANRRSEFII 657 >gi|327399143|ref|YP_004340012.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411] gi|327181772|gb|AEA33953.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411] Length = 172 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 7/105 (6%) Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + VL I + + I I G+ D N L RA +A + Sbjct: 72 NKWGIKQNVPAVLDGIAQYMVKHPNVRIRIEGNCDER---GTVEYNLALGQKRALAAKKY 128 Query: 299 LMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 L+ GV+ DRI IS + R ++ + NRR ++ + Sbjct: 129 LVAKGVNPDRIDIIS-YGESRPLDPAHNEYAWAKNRRDHFVILSK 172 >gi|260574615|ref|ZP_05842618.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] gi|259023032|gb|EEW26325.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] Length = 213 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ +S++ L + + E + GH D N L L RA + Sbjct: 69 FEFNSAVLDGAAQAALDQQANWIRQFPEVRFRVYGHADRVGSNG---YNHALGLKRARAV 125 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L G+S R+ + + R + + NRR Sbjct: 126 VSYLNSRGISRSRLEAMVSYGETRPVVDTLGPEVRNRR 163 >gi|298488736|ref|ZP_07006765.1| Outer membrane protein, OmpA family [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156809|gb|EFH97900.1| Outer membrane protein, OmpA family [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 301 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L + L V I GH+D N LS RA + Sbjct: 178 FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 G+ E +I + + ++ + NRR+++ +E Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLVPNTNEANRARNRRVNVHLER 281 >gi|319951894|ref|YP_004163161.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319420554|gb|ADV47663.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 647 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 FD S + ++++K+ L I I HTDA N RLS Sbjct: 534 NLEKIYFDFDQSYIRKDAQIIMEKVIAYLNQYPNTKIRIGSHTDAI---ANDAYNSRLSE 590 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRL-------KIASDPMNSANRRIDILV 338 RA + Y+ L+K G++ R+ GF +L S + NRR + +V Sbjct: 591 RRAKATYEYLVKKGIAASRL-TFKGFGETQLNNECKNTVNCSAEKHQLNRRSEFIV 645 >gi|260576643|ref|ZP_05844630.1| peptidoglycan-associated lipoprotein [Rhodobacter sp. SW2] gi|259021128|gb|EEW24437.1| peptidoglycan-associated lipoprotein [Rhodobacter sp. SW2] Length = 177 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + F S + L + L + + I I GH D N L R Sbjct: 67 DRVFFAVDQSNLSDQARATLAGQAQWLNTNRDYAIIIEGHADEQ---GTREYNLALGARR 123 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 A + L+ GV+ R+ +S + R + S NRR Sbjct: 124 ASAVQNYLISQGVTASRMRTVS-YGKERPIEVCSTEDCYSRNRR 166 >gi|188577427|ref|YP_001914356.1| outer membrane protein P6 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521879|gb|ACD59824.1| outer membrane protein P6 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 148 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD PE ++ + L I+++G+ D N L Sbjct: 39 RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 95 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337 R + L +G S ++ + + R +++ S NRR++I+ Sbjct: 96 RRGNAVSSSLQAAGGSASQL-TVVSYGEERPVCTESNESCWSQNRRVEIV 144 >gi|167563638|ref|ZP_02356554.1| ompA family protein [Burkholderia oklahomensis EO147] Length = 209 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD +I P L ++ + + + G+TD + N RLSL RA + Sbjct: 86 LFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLRRAQA 142 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVEDRQ 342 L+ GV +++ G + N RR+++ V Q Sbjct: 143 VKSYLVSKGVPANKVYT-EGKGKRNPVTGN-TCKQKNRKQLIACLAPDRRVEVEVVGTQ 199 >gi|257125161|ref|YP_003163275.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b] gi|257049100|gb|ACV38284.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b] Length = 366 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294 F IP L+ I V+ + SI GHTD++ N +LS+ RA + Sbjct: 250 FKVDGRIPNEREAGDLRAIAGVINQFADGGSIDFVGHTDST---GSDAYNQKLSVARAQN 306 Query: 295 AYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 ++L + G+ I+G +D + NRR+++ ++ Sbjct: 307 VARLLREYGLKNTISYGTITGQGESNPADTNDTTDGRYNNRRVELFFQN 355 >gi|171912007|ref|ZP_02927477.1| OmpA/MotB domain protein [Verrucomicrobium spinosum DSM 4136] Length = 1122 Score = 79.2 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 45/161 (27%), Gaps = 16/161 (9%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP---------MFDK 239 ++ +D+ I + + T + + F Sbjct: 963 QRIAEDVGFFIQPERQVPQSPDPDDTGKRNEQSTWLTLRFDSNDGNLNAPSVQQLNRFFI 1022 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 + E + +K L + GH D+ N RLS RA + + Sbjct: 1023 GAPTLDDEEKRIDRKRRSDLL-IQYRFVLEGHADSI---GTEASNMRLSERRARTVATFI 1078 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 GV ++ I F + NRR++I + Sbjct: 1079 ESMGVDRSKL-SIKWFGESLPVDDNSVEAGRYKNRRVEIRL 1118 >gi|323963914|gb|EGB59407.1| OmpA family protein [Escherichia coli M863] Length = 160 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEALSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G R G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGQIPRRNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|37704660|gb|AAR01602.1| OprF [Pseudomonas sp. MFY160] Length = 316 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ + ++ + + + + + GHT Sbjct: 210 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKTNSYGDIKNLADFMKQYPSTTTTVEGHT 269 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS RA + QVL GV R+ + G+ R Sbjct: 270 DSV---GPDAYNQKLSERRANAVKQVLTNQYGVESARVQSV-GYGESRPVA 316 >gi|163733522|ref|ZP_02140965.1| peptidoglycan-associated lipoprotein, putative [Roseobacter litoralis Och 149] gi|161393310|gb|EDQ17636.1| peptidoglycan-associated lipoprotein, putative [Roseobacter litoralis Och 149] Length = 173 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F S ++ + L A++ I GH D N L R Sbjct: 63 DRVLFSVDESAINAVGQTTVEGQAQWLLANTDYTAVIEGHADEQ---GTREYNVALGARR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 A + + L+ GV+ +R+ +S + R + NRR Sbjct: 120 ANAVREYLISRGVAGNRLQTVS-YGKERPIEICSSEECYAKNRR 162 >gi|325923404|ref|ZP_08185069.1| peptidoglycan-associated lipoprotein [Xanthomonas gardneri ATCC 19865] gi|325546119|gb|EGD17308.1| peptidoglycan-associated lipoprotein [Xanthomonas gardneri ATCC 19865] Length = 172 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ FD PE ++ + L I+++G+ D N L Sbjct: 63 RQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADER---GSREYNMGLGE 119 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 R + L +G S +++ +S + R S NRR++I+ Sbjct: 120 RRGNAVSSSLQAAGGSASQLTVVS-YGEERPVCTETSESCWSQNRRVEIV 168 >gi|183220368|ref|YP_001838364.1| hypothetical protein LEPBI_I0964 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910483|ref|YP_001962038.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775159|gb|ABZ93460.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778790|gb|ABZ97088.1| Hypothetical protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 229 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 5/125 (4%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 E + +I F S P+ ++ K+G+ + E I GHTD+ Sbjct: 101 RIEDDEKRLRELLIIIDGDVAFPSGKSTLTPKAKELIAKVGDAMEAYPETNCRIGGHTDS 160 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 N +LS +R+ S + L + ++E+R ++ G+A + + + NRR Sbjct: 161 V---GAFSMNLKLSKERSQSVKRELKLVHKIAEERFKEVDGYADQQKIVDTMLAEKKNRR 217 Query: 334 IDILV 338 +I V Sbjct: 218 TEIYV 222 >gi|256828444|ref|YP_003157172.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256577620|gb|ACU88756.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028] Length = 198 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S E+ V I E + ++ + I GH+D DN RLSL+RA A Sbjct: 97 FEFGRSELTAESKPVPPMIIEAITRRNSRDVRINGHSDTI---GQREDNARLSLERAEGA 153 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 +L+K G+ I ++ L I + D NRR+++LV Sbjct: 154 RDILIKEGIDPS-IMQVFSHGEGNLLIPTADDTPEPRNRRVEVLVR 198 >gi|221068061|ref|ZP_03544166.1| peptidoglycan-associated lipoprotein [Comamonas testosteroni KF-1] gi|220713084|gb|EED68452.1| peptidoglycan-associated lipoprotein [Comamonas testosteroni KF-1] Length = 175 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 7/107 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 FD S + ++ + + + + + GHTD N L R Sbjct: 70 RIVYFDFDSYSVKADAQPQIEAHAKFIKANPAAKVQLEGHTDER---GGREYNLALGQKR 126 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 A + + L GV++ ++ +S + + + + NRR++I Sbjct: 127 AEAVRRSLGLLGVNDAQVEAVS-YGKEKPAAEGHGEDAYAQNRRVEI 172 >gi|121594094|ref|YP_985990.1| TonB box domain-containing protein [Acidovorax sp. JS42] gi|222111172|ref|YP_002553436.1| peptidoglycan-associated lipoprotein [Acidovorax ebreus TPSY] gi|120606174|gb|ABM41914.1| TonB box domain protein [Acidovorax sp. JS42] gi|221730616|gb|ACM33436.1| peptidoglycan-associated lipoprotein [Acidovorax ebreus TPSY] Length = 180 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S I PE VL+ + S+ + GHTD N L RA + Sbjct: 79 FDFDSFIVKPEFQSVLEAHARFMKASSARKVVLEGHTDER---GGREYNLALGQKRAEAV 135 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 + L GV + ++ +S F + + ++ NRR+++ Sbjct: 136 RRSLGLLGVQDAQVEAVS-FGKEKPAVQGHTEDAHSQNRRVEL 177 >gi|90578134|ref|ZP_01233945.1| putative outer membrane protein [Vibrio angustum S14] gi|90441220|gb|EAS66400.1| putative outer membrane protein [Vibrio angustum S14] Length = 196 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 60/171 (35%), Gaps = 9/171 (5%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + K+ K L D AD + V+ + + + + Sbjct: 17 SLSVPQPPIAKQTKDLFDADSDGVINQRDRCADTPIDAVVDNDGCPTFVKNSEENNIHVL 76 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS + + + E LA I ++G+ A N LS RA + Sbjct: 77 FANDSSEIPESYMENISNMSEFLAKYPKTHIELKGYASPV---GNAAYNVGLSKRRAAAI 133 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVEDRQG 343 Q L+ GV+ RI I GF ASD S N RR+ V QG Sbjct: 134 QQALITEGVAPSRIKTI-GFGDSDPVKASDAEES-NTLSRRVVAQVVGSQG 182 >gi|4579742|dbj|BAA75215.1| OmpA-like outer membrane protein [Aggregatibacter actinomycetemcomitans] Length = 346 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 16/131 (12%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 ++ + F + P+ L I +A + + G+TD Sbjct: 220 VVRKTFSLNSDVTFAFGKANLKPQAQNTLDGIYGEIAQVNNANVQVAGYTDRI---GSDA 276 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------N 331 N +LS RA + L+ GVS+ IS +G + D + + Sbjct: 277 YNQKLSQRRAETVANYLVSKGVSQQAISA-TGHGKANPVTGNKCDVVKGRKALIACLADD 335 Query: 332 RRIDILVEDRQ 342 RR++I V + Sbjct: 336 RRVEIAVNGTK 346 >gi|319954323|ref|YP_004165590.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319422983|gb|ADV50092.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 639 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + T F+ +SS L K+ + + + H+D+ R N LS Sbjct: 525 KLKTIFFNTNSSYLNANAYPELDKVVAYMKEFPNARVEVGSHSDSRD---SDRYNLWLSD 581 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 RA S ++ G+SEDRI+ +G+ L S+ ++ NRR + +V Sbjct: 582 RRAKSTVSYIVSMGISEDRITA-TGYGETLLVNKCINDAPCSEAEHALNRRSEFIV 636 >gi|284038460|ref|YP_003388390.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283817753|gb|ADB39591.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 798 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 12/116 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + +D + + P+ V L K+ E+L + +R HTD+ A N LS +R Sbjct: 685 DNIYYDLNKATIRPDAAVELDKVVELLTKYPAMTIEMRSHTDSR---ATAVYNKTLSGNR 741 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 A S L G++ +R+ G+ +L S+ + NRR +I + Sbjct: 742 AKSVVAYLKSKGIAMERMIA-KGYGESQLLNKCKDGVECSEEDHQKNRRTEIKILK 796 >gi|83647008|ref|YP_435443.1| outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] gi|83635051|gb|ABC31018.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] Length = 493 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 59/149 (39%), Gaps = 8/149 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 +D L ++ + V ++ I + FD ++ E+ L Sbjct: 345 EDETAVQQIILESEALEDDLITVDVDSLSRDIDETGKALLYGVFFDTDKAVVKDESKPTL 404 Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRIS 310 + I +L E++ + GHTD + + N LS RA + + L+K GV++ R++ Sbjct: 405 EAIAGLLKKRPELLLYVTGHTDDT---GAFQHNIELSSARAKAVVERLIKDYGVAQARLT 461 Query: 311 KISGFAHHRLKIASDPMNS--ANRRIDIL 337 G + + NRR++++ Sbjct: 462 PY-GVGPVAPEADNLSDAGKKRNRRVELI 489 >gi|325286038|ref|YP_004261828.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324321492|gb|ADY28957.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 305 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 9/125 (7%) Query: 220 TRTGILISIIDQRNTPMFDKSS--SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 + + I F E + I L + ++ GHTD + Sbjct: 185 QMDALYLKIKSNPLVLHFKTGQAAINLTAEQRQKIADISTYLDKVEGAMCNVVGHTDNT- 243 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334 N L L RA A + L +G+S +I+ S +D + NRR Sbjct: 244 --GDRTTNIGLGLKRAEFAKEYLTNNGISPSKINT-SSKGPDEPIATNDTEEGKAQNRRT 300 Query: 335 DILVE 339 I ++ Sbjct: 301 VITLK 305 >gi|323698017|ref|ZP_08109929.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132] gi|323457949|gb|EGB13814.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132] Length = 240 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 67/180 (37%), Gaps = 9/180 (5%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + + + L PL R + L + Sbjct: 63 SRQSAEKAQAAGALDPLMGLIGQIASRADTGGSRDVVRMAEKEVLYRSRTNGITVVREAP 122 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281 + +++ R FD +S PE+ L +IG+V+ S ++ + G D S Sbjct: 123 GRVRVTL---RGDLFFDGNSGRLKPESAAYLDEIGDVVRLSVGLVHVIGFADQSEAEGS- 178 Query: 282 RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 ++ LS +RA S L+ + G+ R+ I+G ++ ++ + NRR++I++ Sbjct: 179 -SSFTLSSERAASVADQLITRLGIEPKRLV-ITGRGAYQPELPDTSAANQTLNRRVEIVI 236 Score = 39.9 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 19/175 (10%), Positives = 52/175 (29%), Gaps = 6/175 (3%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK----KAIEQYFNPFGKNLMTA 79 D W + ++D M V+ F+V++I +T D K + + G Sbjct: 21 PDPNRGANDWAVPWSDLMMVMFVLFVVLFIYTSTKQDVKILFSRQSAEKAQAAGALDPLM 80 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDE--HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 S++ + ++ E + ++ + + + + + F ++ Sbjct: 81 GLIGQIASRADTGGSRDVVRMAEKEVLYRSRTNGITVVREAPGRVRVTLRGDLFFDGNSG 140 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + L + + + ++ E + A +L Sbjct: 141 RLKPESAAYLDEIGDVVRLSVGLVHVIGFADQSEAEGSSSFTLSSERAASVADQL 195 >gi|253990221|ref|YP_003041577.1| outer membrane protein A [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781671|emb|CAQ84834.1| outer membrane protein a (outer membrane protein ii*) [Photorhabdus asymbiotica] Length = 366 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 19/125 (15%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288 R+ +F +SS E L ++ LAH + + G+TD N +LS Sbjct: 237 RSDVLFAFASSELKAEGKHTLDQLYTELAHIDPTQGKVLVLGYTDRI---GKDVYNQKLS 293 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDIL 337 RA S L+ G+ IS G + + +RR++I Sbjct: 294 QKRAQSVVDYLVTKGIPAGSISA-EGHGKANPV-TGSTCDKVLKPNLISCLAPDRRVEIE 351 Query: 338 VEDRQ 342 ++ + Sbjct: 352 IQGTK 356 >gi|292490342|ref|YP_003525781.1| peptidoglycan-associated lipoprotein [Nitrosococcus halophilus Nc4] gi|291578937|gb|ADE13394.1| peptidoglycan-associated lipoprotein [Nitrosococcus halophilus Nc4] Length = 191 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ SS + +++ G+ LA +V ++ GHTD N L RA + Sbjct: 88 FEFDSSEIQEDDRPIVEAHGDYLAKHPDVSLTLEGHTDER---GSREYNLALGERRANAV 144 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 ++++ G SED++ ++ + R + + NRR++IL Sbjct: 145 RRLVLLMGASEDQV-QVVSYGEERPAVDGHDEGAWQLNRRVEIL 187 >gi|288959770|ref|YP_003450110.1| outer membrane protein [Azospirillum sp. B510] gi|288912078|dbj|BAI73566.1| outer membrane protein [Azospirillum sp. B510] Length = 203 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 FD S P V+ + +L + I + GHTD N +LS+ Sbjct: 89 SEYLVFFDWDKSTITPAADRVIGDAVSAILKNGGAKIQVVGHTDT---SGSPAYNQKLSV 145 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 RA + + L+ G+ I+ G +L + + P +NRR IL Sbjct: 146 RRADAVKKALVAKGIQAANITT-EGKGESQLLVQTGPNVREPSNRRAQIL 194 >gi|257453916|ref|ZP_05619193.1| inner membrane lipoprotein YiaD [Enhydrobacter aerosaccus SK60] gi|257448688|gb|EEV23654.1| inner membrane lipoprotein YiaD [Enhydrobacter aerosaccus SK60] Length = 216 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 51/153 (33%), Gaps = 23/153 (15%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L A+ GV I++ F S LP L K+ Sbjct: 76 YMQQQEAKLRAETAGSGVTVTRDPVTNNINLS-IPEAITFRVGDSTILPNFYNTLDKVAT 134 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L + I + G+ A N LS RA + L+ G+S +RIS I G Sbjct: 135 TLRDYNQTNIQVNGYAS---VEGDANRNQALSQRRASAVANYLVNRGISGNRISAI-GRG 190 Query: 317 -------HHRLKIASDPMNSANRRIDILVEDRQ 342 + NRR+++++ Q Sbjct: 191 ATTQFGSSYEP----------NRRVEMIILAPQ 213 >gi|288940691|ref|YP_003442931.1| peptidoglycan-associated lipoprotein [Allochromatium vinosum DSM 180] gi|288896063|gb|ADC61899.1| peptidoglycan-associated lipoprotein [Allochromatium vinosum DSM 180] Length = 177 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 + T FD ++ P+ + V++ L ++ GHTD N LS Sbjct: 72 QRTIYFDYDTAEIKPQYLDVIRTHARYLGSQPGTRVTLEGHTDER---GTREYNLALSDQ 128 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 RA S + ++ GV +++ I + R NRR+ I Sbjct: 129 RADSVRRFMLAEGVPANQM-TILSYGEERPADPGHSEQSWRLNRRVII 175 >gi|254487597|ref|ZP_05100802.1| OmpA family domain protein [Roseobacter sp. GAI101] gi|214044466|gb|EEB85104.1| OmpA family domain protein [Roseobacter sp. GAI101] Length = 312 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 12/169 (7%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FD 238 +Q + + S + V + ++++ + F+ Sbjct: 147 ASTAATSAYVQIIQARSLSDTAAEPTGAADTQVAEIRQPDALAATLVNTGRVVLSSLEFE 206 Query: 239 KSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 +S P + L + LA +++ GHTD DN LS RA S Q Sbjct: 207 TGTSGLGPAKVAALDSLAAFLAGDPALRVALVGHTDTV---GGLEDNVALSRSRAASVRQ 263 Query: 298 VLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 L+ GVS D++ G + ++ NRR++ ++ G Sbjct: 264 RLIDAYGVSPDQLEA-QGMGYLAPIASNLTAQGREANRRVEAVLLPEPG 311 >gi|49182348|gb|AAT57676.1| OmpA [Pasteurella multocida] Length = 349 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 16/118 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P VL I +A +++ G+TD N +LS RA + Sbjct: 236 FGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRL---GSDAYNLKLSQRRADTV 292 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILVEDRQ 342 L+ GV+++ IS +G + D + +RR++I V+ + Sbjct: 293 ANYLVAKGVAQNAISA-TGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGNK 349 >gi|294670501|ref|ZP_06735381.1| hypothetical protein NEIELOOT_02220 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307780|gb|EFE49023.1| hypothetical protein NEIELOOT_02220 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 271 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 5/85 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F+ P+ I L + L+ + + + + GHTD F + N LS RA + Sbjct: 90 LFNFDKDNLRPQAIETLNSLAARLSDANVQAVRVEGHTD---FMGSEQYNQALSERRANA 146 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 L+ GV +IS + G + Sbjct: 147 VANYLVNQGVPAGKISAV-GLGESQ 170 >gi|302387785|ref|YP_003823607.1| OmpA/MotB domain protein [Clostridium saccharolyticum WM1] gi|302198413|gb|ADL05984.1| OmpA/MotB domain protein [Clostridium saccharolyticum WM1] Length = 262 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 6/92 (6%) Query: 16 IIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKN 75 +IKK ++ LGSW Y D +T+L+ FF++++ +++ D K + Q FNP Sbjct: 1 MIKKDKKPEE----LGSWMDTYGDMVTLLLCFFVLLYSMSSVDQSKWKLLVQSFNP--SA 54 Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107 L + + + D + T Sbjct: 55 LEESDQVVLDAKVTEGEGKLTGGIPDDGGGAT 86 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 64/198 (32%), Gaps = 17/198 (8%) Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + + ++ + L+ +L + + N+ Sbjct: 48 QSFNPSALEESDQVVLDAKVTEGEGKLTGGIPDDGGGATDFDELYLVLKQIVED---RNM 104 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISI 268 V IS D+ FD SS+ E VL + + S + + + Sbjct: 105 QDSVEITRGDGFTFISFRDK---VFFDGDSSVLRQEGKDVLTQFAAAMSQANKSIKEVQV 161 Query: 269 RGHT---DASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKI-- 322 GHT D NI D LS R+ L VS +++ +S F R Sbjct: 162 LGHTSQGDPQRPNNIRNDRM-LSAQRSAEVIIYLQSQNAVSPEKLVGMS-FGQFRPIAQF 219 Query: 323 ASDPMNSANRRIDILVED 340 ++ + NRR++IL+ Sbjct: 220 DTEEGRAQNRRVEILITK 237 >gi|114765730|ref|ZP_01444828.1| peptidoglycan-associated lipoprotein [Pelagibaca bermudensis HTCC2601] gi|114541947|gb|EAU44982.1| peptidoglycan-associated lipoprotein [Roseovarius sp. HTCC2601] Length = 174 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F S PE L L +++ +++ GH D N L R Sbjct: 64 DRVLFLVDQSSLTPEAQATLDAQAGWLMTNSDYLAVIEGHADEQ---GTREYNIALGARR 120 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333 A + + L+ GV+ +R+ IS + R + + + NRR Sbjct: 121 ANATMEYLISKGVAPNRLKIIS-YGKERPVEICSEESCYAKNRR 163 >gi|66047120|ref|YP_236961.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] gi|63257827|gb|AAY38923.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] Length = 300 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 33/108 (30%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L + L V I GH+D N LS RA + Sbjct: 178 FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 GV E +I + ++ + NRR+++ +E Sbjct: 235 VMDYFKAQGVPEQQI-TLRFHGERYPLAPNTNEANRARNRRVNVHLER 281 >gi|237746664|ref|ZP_04577144.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes HOxBLS] gi|229378015|gb|EEO28106.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes HOxBLS] Length = 167 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + + FD S + E V+ L + +G+TD + N L Sbjct: 61 QKSVYFDFDSYVVKGEYQPVVDAHARYLNGHRNRTVVIQGNTDER---GGSEYNLALGQK 117 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 RA + + + GV + ++ +S F + + ++ + NRR DI+ Sbjct: 118 RAEAVRKAMALMGVPDSQMEAVS-FGKEKPRATGNNEAAWAENRRADIV 165 >gi|254228271|ref|ZP_04921700.1| OmpA family protein [Vibrio sp. Ex25] gi|262394176|ref|YP_003286030.1| outer membrane protein [Vibrio sp. Ex25] gi|151939344|gb|EDN58173.1| OmpA family protein [Vibrio sp. Ex25] gi|262337770|gb|ACY51565.1| outer membrane protein [Vibrio sp. Ex25] Length = 204 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 9/123 (7%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARD 283 + S + + +F S + P ++++ + L I I+G+ + A Sbjct: 72 VDSSQEMQIRVLFANDSDVINPIFTEQIRELSDFLKEYPNTSIEIQGYASRT---GTAEH 128 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM---NSANRRIDILVED 340 N LS RA + + LM +G+S DR+ I G+ ++ NRR+ V Sbjct: 129 NLDLSKRRAENVRKELMMNGISGDRV-TIVGYGDTV-LATQGTDQVSHALNRRVTATVIG 186 Query: 341 RQG 343 +G Sbjct: 187 HKG 189 >gi|76812099|ref|YP_333598.1| ompA family protein [Burkholderia pseudomallei 1710b] gi|76581552|gb|ABA51027.1| ompA family protein [Burkholderia pseudomallei 1710b] Length = 290 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 +F + L + + S + + G+TD N RLS Sbjct: 175 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLVVTGYTDRL---GSDEHNARLSS 231 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 +RA + ++ G+ +I+ + G + + NRR++I ++ + Sbjct: 232 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 290 >gi|89075158|ref|ZP_01161594.1| putative outer membrane protein [Photobacterium sp. SKA34] gi|89049112|gb|EAR54678.1| putative outer membrane protein [Photobacterium sp. SKA34] Length = 196 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 56/170 (32%), Gaps = 7/170 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + K+ K L D AD + V+ + + + + Sbjct: 17 SLSVPQPPITKQTKDLYDADSDGVINQRDRCADTPIDAVVDNDGCPTFVKNSEENNIHVL 76 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS + + + E L I ++G+ N LS RA Sbjct: 77 FANDSSEIPESYMENISNMSEFLTKYPKTHIELKGYASPV---GNTAYNVELSKRRAAVI 133 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343 Q L+ G+ RI I GF ASD + +RR+ V QG Sbjct: 134 RQALITEGIVPSRIKTI-GFGDSDPVKASDVEESNALSRRVVAQVVGSQG 182 >gi|237750612|ref|ZP_04581092.1| flagellar motor rotation protein MotB [Helicobacter bilis ATCC 43879] gi|229373702|gb|EEO24093.1| flagellar motor rotation protein MotB [Helicobacter bilis ATCC 43879] Length = 255 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 7/111 (6%) Query: 232 RNTPMFDKSSSI-PLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLS 288 + +F+ ++ + L + +A I+IRG+TD S R+N+ L+ Sbjct: 127 PSDILFEPGTAELVNQDRKTELDLLATAIAKMPPEVTINIRGYTDNSSPAG-YRNNYELA 185 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 RA + + LM GV R+ + + + + + AN R+++ Sbjct: 186 AARASNVMEYLMSRGVDPARL-SFTSYGQYNPIVPNTSEVNRRANNRVEVF 235 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 3/157 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK ++ P W + YADF+++L+A F+ ++ I+A + KA+ + F Sbjct: 3 KKCKCEECPAG-EKWAVPYADFLSLLLALFIALYAISAANTSRVKAVTEAFITIFDATPM 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + + PP+ + + ++ + N T + L + L + Sbjct: 62 PERTMPVMIIPPDPGTVRQETKDTLKNTSTNLNAPTTVVTITQ--LSNLIQDGGLLEQIE 119 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 Q + E G + D + ++ Sbjct: 120 QGTTLRLPSDILFEPGTAELVNQDRKTELDLLATAIA 156 >gi|228472824|ref|ZP_04057582.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624] gi|228275875|gb|EEK14641.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624] Length = 393 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 11/225 (4%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK- 180 ++ F N + + +L R + +LE+ + E+ S Sbjct: 173 DGLSNTTHDGFKGLNFTGTIGLQVALGRHMIHADWYSEGKELERKLQAAEDRIAKAESDV 232 Query: 181 ---EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPM 236 K L K + + +I L + + + +I++ Sbjct: 233 ANLAKKLDEKEDRMVDTNGNRIPDELENYLNEKYGSNAQNKYATGDAARELIEKGYINVY 292 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +SS P ++ + + L ++ ++ G+ D + N +LS RA Sbjct: 293 FDFNSSKPQKSSLWAVDFVANYLKQNSGASVNAVGYADE---KGSENYNQKLSAKRAEVI 349 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSANRRIDILVE 339 Q+L+ G++ ++ G + A+ RR+ ++ Sbjct: 350 KQLLVDRGINASQL-SFEGKGEDKTVNANSSNARQLARRVTFELK 393 >gi|167824061|ref|ZP_02455532.1| hypothetical protein Bpseu9_10300 [Burkholderia pseudomallei 9] Length = 290 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 +F + L + + S + + G+TD N RLS Sbjct: 175 LFAFDKGGFEDISADGRRQLGDLVASIKAKIFSINHLIVTGYTDRL---GSDEHNARLSS 231 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 +RA + ++ G+ +I+ + G + + NRR++I ++ + Sbjct: 232 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 290 >gi|319954672|ref|YP_004165939.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319423332|gb|ADV50441.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 638 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 11/119 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + FD + L+K+ VL + I HTDA N +LS Sbjct: 523 KVEPIYFDYDKYDITVRAEIELEKVLFVLREFPAIKIKIESHTDAR---GKDAYNLKLSD 579 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--AS-----DPMNSANRRIDILVEDR 341 +RA + L+ G+ +RI +G+ ++LK ++ + + NRR D ++ + Sbjct: 580 NRAKATRDYLILKGIVANRIESANGYGEYQLKNECSNGVSCSEQKHLINRRSDFIIISK 638 >gi|330973095|gb|EGH73161.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT] Length = 300 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 33/108 (30%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L + L V I GH+D N LS RA + Sbjct: 178 FPGGGIELDARARARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 GV E +I + ++ + NRR+++ +E Sbjct: 235 VMDYFKAQGVPEQQI-TLRFHGERYPLAPNTNEANRARNRRVNVHLER 281 >gi|326336146|ref|ZP_08202318.1| OmpA/MotB domain protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691655|gb|EGD33622.1| OmpA/MotB domain protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 394 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 12/182 (6%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR-- 221 + + + S K L K + + +I + + + + Sbjct: 219 QAAEERIAKAESDVASLAKKLDEKEDRMIDTNGNRIPDEIENYLNEKYGNSANAQNYATG 278 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI 280 I FD +SS P ++ + L ++ +I G+ D Sbjct: 279 DTARDLIEKGYINVYFDFNSSKPQKSSLWAADFVANYLKQNSGSSVNIVGYADEI---GG 335 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMNSANRRIDIL 337 N +LS RA + Q+L+ G+ R+ G + + RR+ Sbjct: 336 ENYNQKLSNKRAEAIKQLLVDRGIDASRL-SFEGKGEDKTVNVKAPN--ARQLARRVTFE 392 Query: 338 VE 339 ++ Sbjct: 393 LK 394 >gi|153002489|ref|YP_001368170.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185] gi|217975056|ref|YP_002359807.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223] gi|151367107|gb|ABS10107.1| OmpA/MotB domain protein [Shewanella baltica OS185] gi|217500191|gb|ACK48384.1| OmpA/MotB domain protein [Shewanella baltica OS223] Length = 202 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S+ PE ++++ L +I GHT + N LS +RA + Sbjct: 79 LFPNDSAYIAPEYYPQIEEVAVFLQQYPTTKVTIEGHTSRT---GTDERNLVLSQERADA 135 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 VL + G+ +R++ G+ + + NRR+ Sbjct: 136 VTAVLAERFGIDRNRLTA-KGYGSSNPVVLERTPEAEIRNRRV 177 >gi|301062462|ref|ZP_07203113.1| putative peptidoglycan-associated lipoprotein [delta proteobacterium NaphS2] gi|300443436|gb|EFK07550.1| putative peptidoglycan-associated lipoprotein [delta proteobacterium NaphS2] Length = 103 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 7/100 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S PE +L+ + L + I G+ D N L RA SA Sbjct: 1 FDFDRSNLKPEAQEILRDKADFLRANRSYSVLIAGNCDDR---GTEEYNLALGERRAMSA 57 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-SDP-MNSANRR 333 + L+ G+S DRI IS + R ++P + NRR Sbjct: 58 KKFLVALGISPDRIKTIS-YGELRPADPANNPVAWALNRR 96 >gi|119775227|ref|YP_927967.1| OmpA/MotB [Shewanella amazonensis SB2B] gi|119767727|gb|ABM00298.1| OmpA/MotB [Shewanella amazonensis SB2B] Length = 289 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294 ++ + + L ++ E L+ +V I I +TD+ N ++S RA S Sbjct: 184 YESGGTELTRFSKAQLARVQEYLSLDPDVELILINAYTDS---HGGRNLNQKVSDKRADS 240 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340 + G+ DRI G R ++ NRR+ I + Sbjct: 241 VKDFFVSKGIPADRIQT-EGHGETRHVASNQGADERQRNRRVVIQITK 287 >gi|110086793|gb|ABG49460.1| hemagglutinin antigen [Avibacterium paragallinarum] Length = 345 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 ++ + F + PE VL I +A + + G+TD Sbjct: 211 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDR 270 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330 N +LS RA + L+ GV+++ IS +G+ D + Sbjct: 271 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDAVKGRKA 326 Query: 331 -------NRRIDILVEDRQ 342 +RR++I V+ + Sbjct: 327 LIACLADDRRVEISVKGNE 345 >gi|117919656|ref|YP_868848.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3] gi|117611988|gb|ABK47442.1| OmpA/MotB domain protein [Shewanella sp. ANA-3] Length = 191 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 8/110 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ + + L + L A++ +++ GHTD N++LSL RA Sbjct: 85 VYFEFAIAEVDLSQWKALALVKAFLDANTETRLTLVGHTD---IVGTPEFNYQLSLRRAQ 141 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 + ++L++ G + +R + G + NRR+ +V + Sbjct: 142 NVKRILVEDYGFNPNRF-TVVGKGISEPVADNHSSEGRRLNRRVQFIVNN 190 >gi|212634650|ref|YP_002311175.1| OmpA protein [Shewanella piezotolerans WP3] gi|212556134|gb|ACJ28588.1| OmpA [Shewanella piezotolerans WP3] Length = 325 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 ++ + + K+ E LA + +++ I +TD+ N R+S+ RA S Sbjct: 220 YESGGTELTRYAKAQINKVQEYLAYDQNVDLVLIDAYTDSY---GGRSANERVSVQRADS 276 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 ++ + SG+ + RI + G R ++ + NRR+ I + Sbjct: 277 VKELFVASGIPQSRIHTM-GHGERRHVASNKTIDERARNRRVVIRISKP 324 >gi|45758069|gb|AAO85793.1| heat-modifiable outer membrane protein [Mannheimia glucosida] gi|45758071|gb|AAO85794.1| heat-modifiable outer membrane protein [Mannheimia glucosida] Length = 367 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 244 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANPAIQVNGYTDRI---GKEASNLKLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G + ++ + G+ D + +RR++I V Sbjct: 301 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|45758067|gb|AAO85792.1| heat-modifiable outer membrane protein [Mannheimia glucosida] Length = 367 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 244 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANPAIQVNGYTDRI---GKEASNLKLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G + ++ + G+ D + +RR++I V Sbjct: 301 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|71733309|ref|YP_276024.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. phaseolicola 1448A] gi|257486625|ref|ZP_05640666.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624957|ref|ZP_06457911.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650466|ref|ZP_06481809.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae pv. aesculi str. 2250] gi|71553862|gb|AAZ33073.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325629|gb|EFW81691.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae pv. glycinea str. B076] gi|320327087|gb|EFW83101.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae pv. glycinea str. race 4] gi|330867247|gb|EGH01956.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330879063|gb|EGH13212.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. glycinea str. race 4] gi|330889567|gb|EGH22228.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. mori str. 301020] gi|330989530|gb|EGH87633.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010107|gb|EGH90163.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 301 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L + L V I GH+D N LS RA + Sbjct: 178 FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 G+ E +I + + ++ + NRR+++ +E Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLVPNTNEANRARNRRVNVHLER 281 >gi|85715944|ref|ZP_01046921.1| hypothetical protein NB311A_14045 [Nitrobacter sp. Nb-311A] gi|85697142|gb|EAQ35023.1| hypothetical protein NB311A_14045 [Nitrobacter sp. Nb-311A] Length = 314 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD ++ PE+ L +I ++L+ I GHTD+ N LS RA + Sbjct: 212 FDTDKAVIKPESRPTLDQIAKLLSGQPGFNVYIVGHTDSQ---GTPAHNLELSRRRAEAV 268 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 + L++ +++ R++ G ++ D + NRR++++ Sbjct: 269 AEDLVRTYKIAKARLNTA-GVGFLAPVGSNGTDAGRALNRRVELV 312 >gi|256823064|ref|YP_003147027.1| peptidoglycan-associated lipoprotein [Kangiella koreensis DSM 16069] gi|256796603|gb|ACV27259.1| peptidoglycan-associated lipoprotein [Kangiella koreensis DSM 16069] Length = 172 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 6/150 (4%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 K + + + + I+ + N FD E Sbjct: 24 KPEEEQVDTTAQEDAAAQAEAEALARQRAAEEAERQRIAALLDNNVIYFDFDDDSIRSEY 83 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + VL+ + S + + + GH D N L RA S Q++ GVS+ Sbjct: 84 VEVLEAHAMYIQSSGKSVVLEGHADER---GTPEYNLALGERRAKSVAQLMRTYGVSDSN 140 Query: 309 ISKISGFAHHRLKIA--SDPMNSANRRIDI 336 I ++ F ++ NRR++I Sbjct: 141 I-EVISFGEESPANPAHNESAWQENRRVEI 169 >gi|15604604|ref|NP_221122.1| peptidoglycan-associated lipoprotein precursor (pal) [Rickettsia prowazekii str. Madrid E] gi|3861299|emb|CAA15198.1| PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN PRECURSOR (pal) [Rickettsia prowazekii] gi|292572420|gb|ADE30335.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia prowazekii Rp22] Length = 155 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 7/100 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P+ L++ L+ E +++ GH D N L RA +A Sbjct: 53 FAFDSSSLSPKAKEELERQACWLSKHPEVKVTVEGHCDER---GTREYNLALGERRAAAA 109 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333 Q L G++ +R++ IS + + + + + NRR Sbjct: 110 KQFLANKGIAHNRLNTIS-YGKDKPAMIGNTEEAFSYNRR 148 >gi|107024169|ref|YP_622496.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116688504|ref|YP_834127.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia HI2424] gi|105894358|gb|ABF77523.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116646593|gb|ABK07234.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424] Length = 85 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 6/81 (7%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + I GHTD N LS RA + L+ + +++ +G + Sbjct: 7 KMQNRTVDIIGHTDN---SGNRTSNIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQ 62 Query: 320 LKIASDPM--NSANRRIDILV 338 +D + NRRI+ V Sbjct: 63 PIAPNDTADGRARNRRIEFRV 83 >gi|110637015|ref|YP_677222.1| outer membrane protein A [Cytophaga hutchinsonii ATCC 33406] gi|110279696|gb|ABG57882.1| outer membrane protein A [Cytophaga hutchinsonii ATCC 33406] Length = 734 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 49/131 (37%), Gaps = 11/131 (8%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273 ++ + + I + + +D + + + L ++ +L + + + HTD Sbjct: 605 IVDTLYMKKLEVGEIYKIDDIYYDYNKATIRQDAKPALDQLMNLLTENPTMKIQLNSHTD 664 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMNSA 330 N +LS +RA + L++ G+S DR+ G+ ++ Sbjct: 665 CR---GSDVYNMKLSQNRARAVVTYLVERGISADRLK-FKGYGETLPVTNCACTECTEQQ 720 Query: 331 ---NRRIDILV 338 NRR + + Sbjct: 721 YQDNRRTEFQI 731 >gi|49182354|gb|AAT57679.1| OmpA [Pasteurella multocida] Length = 353 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ + F + P VL I +A Sbjct: 210 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 269 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 270 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 325 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 326 CDSVKGRKALIACLADDRRVEIAVXGNK 353 >gi|332667957|ref|YP_004450745.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332336771|gb|AEE53872.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 279 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 237 FDKSSSI--PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F +S+ P+ L+K+ + +A + E + + GHTD A N +L RA Sbjct: 175 FPVNSTEKDYDPKVDAYLEKLAKRVAKTEERVELTGHTDND---GEADYNLKLGASRARQ 231 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 +L+K GV D IS S + + NRR+++ + + Sbjct: 232 IRDLLVKLGVKADLISTAS-KGETLPVAPNTTDENRHNNRRVEVRLIKK 279 >gi|145298279|ref|YP_001141120.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851051|gb|ABO89372.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 352 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 18/125 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289 + +F + PE + L + + + + G+TD +N LS Sbjct: 221 SDVLFAFGKAELKPEGMQALDALYQQIVDVQPKDGSALVMGYTDRI---GSDINNLALSE 277 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILV 338 RA + L+ G+ D++ I G S D + + +RR+++ V Sbjct: 278 ARASTVANFLIGKGLPADKV-SIQGNGESNPVTGSQCDAIKAKAALIDCLGPDRRVEVRV 336 Query: 339 EDRQG 343 QG Sbjct: 337 TGVQG 341 >gi|33594231|ref|NP_881875.1| putative peptidoglycan-associated lipoprotein [Bordetella pertussis Tohama I] gi|33598303|ref|NP_885946.1| putative peptidoglycan-associated lipoprotein [Bordetella parapertussis 12822] gi|33603213|ref|NP_890773.1| putative peptidoglycan-associated lipoprotein [Bordetella bronchiseptica RB50] gi|33564306|emb|CAE43607.1| putative peptidoglycan-associated lipoprotein [Bordetella pertussis Tohama I] gi|33566861|emb|CAE39076.1| putative peptidoglycan-associated lipoprotein [Bordetella parapertussis] gi|33568844|emb|CAE34602.1| putative peptidoglycan-associated lipoprotein [Bordetella bronchiseptica RB50] gi|332383645|gb|AEE68492.1| putative peptidoglycan-associated lipoprotein [Bordetella pertussis CS] Length = 165 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 7/114 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 SI+ Q+ + FD S + +++ LA + + I G+TD A N Sbjct: 53 SILAQQRSVYFDFDSYTVSEQYRGLVETHARYLASNNQQRIKIEGNTDER---GGAEYNL 109 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L RA + +++ GVS+++I IS F + K + NRR DI+ Sbjct: 110 ALGQRRADAVRRMMTLLGVSDNQIETIS-FGKEKPKATGSSEADFAENRRADIV 162 >gi|288962863|ref|YP_003453157.1| outer membrane protein [Azospirillum sp. B510] gi|288915129|dbj|BAI76613.1| outer membrane protein [Azospirillum sp. B510] Length = 347 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289 FD S P + ++ E + V I + GHTD N +LSL Sbjct: 238 SEYQVFFDWDKSAITPNSDKIIADAAEAAGRARAVRIQVIGHTDT---SGSPSYNQKLSL 294 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 RA + + L+ G + I I G ++L + + P +NRR I+++ Sbjct: 295 RRAEAVRKALVGHGTPAN-IISIEGVGENQLMVPTGPNVREPSNRRAQIMIK 345 >gi|325269973|ref|ZP_08136582.1| OmpA family protein [Prevotella multiformis DSM 16608] gi|324987696|gb|EGC19670.1| OmpA family protein [Prevotella multiformis DSM 16608] Length = 697 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 48/138 (34%), Gaps = 34/138 (24%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + +D + PE+ L ++ ++L + I + HTD + A N RLS R Sbjct: 529 DNIFYDFDKATLRPESEKALNELVKLLDENPNVTIELSAHTD---YIGSAEYNKRLSQRR 585 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL-------------KIASD------------- 325 A + L G++ DR++ + G+ R +D Sbjct: 586 ADAVVAYLTAHGIARDRLTPV-GYGKERPKKIRKKLTEKYPWLKENDVLTEDFIRKLDKE 644 Query: 326 ---PMNSANRRIDILVED 340 N NRR + V Sbjct: 645 KQETANQLNRRTEFTVLR 662 >gi|294673972|ref|YP_003574588.1| OmpA family protein [Prevotella ruminicola 23] gi|294472547|gb|ADE81936.1| OmpA family protein [Prevotella ruminicola 23] Length = 679 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 5/97 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 IS +D + + PE+ L ++ +L + I + HTD N Sbjct: 515 ISAPVLIENIFYDFNKATLRPESKTALDQLVVLLNQNPNVTIELSAHTDCR---GSEAYN 571 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 RLS RA S L+ G++ DR++ G+ K Sbjct: 572 QRLSQQRAESVVAYLIAHGIAADRLTP-KGYGESMPK 607 >gi|157374990|ref|YP_001473590.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3] gi|157317364|gb|ABV36462.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3] Length = 297 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294 ++ + + KI E LA+ EV + I +TD+ N ++S +RA S Sbjct: 192 YEFGGAELTRYAKAQIAKIQEYLAYDPEVELVLIDAYTDSY---GGRSINQKVSEERADS 248 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + +G++++RI + G ++D S NRR+ I + Sbjct: 249 VKNFFLSAGITQERIHTV-GHGERHHVASNDTIDERSRNRRVVIRISKP 296 >gi|332529393|ref|ZP_08405354.1| ompa/motb domain-containing protein [Hylemonella gracilis ATCC 19624] gi|332041191|gb|EGI77556.1| ompa/motb domain-containing protein [Hylemonella gracilis ATCC 19624] Length = 203 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 9/111 (8%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S PE I L + T E + GHTD+ N +LS+ RA Sbjct: 97 VFFDFDKSELKPEAIASLDTLAAKAKGRTVEATIVVGHTDSI---GTPEYNLKLSVRRAE 153 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRR--IDILVED 340 + L G++ + G +D NRR I++++ Sbjct: 154 AVKAHLTAQGINSASVFT-EGKGLTAPARPNDTAEGRAVNRRADIELVIVR 203 >gi|289549271|ref|YP_003474259.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484] gi|289182888|gb|ADC90132.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484] Length = 335 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 76/251 (30%), Gaps = 11/251 (4%) Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 R+ + + +L E I + I + + L + S Sbjct: 86 SRAKEGQYNLDTLEPIRPKDLPPYIRVGDLEDITSALFTIRANKGIQCTPKELAYSEAYY 145 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 L + + L++ K K+ + + Sbjct: 146 EALSYQLKGEVSQPAITMRVYQNLVSYLTEAKRKLEVAKREGLECYVGKREVVKEEEPQE 205 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIR 269 T + + F+ +S E I +L ++ +L + ++ I Sbjct: 206 SP----ISTGEKTVEREYLMVPARVHFEFNSYTIKKEYIPLLLEVARILKENPQIRVRIE 261 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 G+TD N +L+ RA + L K GV +D+I +I+GF + Sbjct: 262 GYTDNI---GSKEYNEKLAFKRAKAVADFLKKQGVPQDKI-EIAGFGKEGYIAPNTTPIG 317 Query: 330 A--NRRIDILV 338 NRR D +V Sbjct: 318 RFTNRRADFIV 328 >gi|184216035|gb|ACC77464.1| outer membrane protein [Lawsonia intracellularis] Length = 340 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 8/104 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S + ++ ++ + + + G TD++ N RLS +RA + Sbjct: 239 FAFDSFALDDTAKAISEETVRLIRANPDFNVRLLGWTDST---GPDAYNLRLSQERADAV 295 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 L+K G+ +R+ G + + NRR +++ Sbjct: 296 KNFLVKMGIPSNRLFA-KGMGKSY-QYNNATKEGRYMNRRTELV 337 >gi|256830358|ref|YP_003159086.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum DSM 4028] gi|256579534|gb|ACU90670.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum DSM 4028] Length = 176 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 7/107 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + F S ++ VL + E+L + I GH D N L R Sbjct: 69 DRIYFAFDRSELSDQSRQVLAEKAELLKTHAALSLLIEGHCDER---GTNEYNMALGERR 125 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 A +AY+ L+ G++ DRI+ IS + + ++ + NRR + Sbjct: 126 ARAAYEYLVLMGIASDRITIIS-YGEEYPAVPGSNEEAWAKNRRDEF 171 >gi|115375610|ref|ZP_01462867.1| putative outer membrane lipoprotein [Stigmatella aurantiaca DW4/3-1] gi|115367386|gb|EAU66364.1| putative outer membrane lipoprotein [Stigmatella aurantiaca DW4/3-1] Length = 206 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 40/122 (32%), Gaps = 17/122 (13%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----------STEVISIRGHTDASPFRNI 280 ++N F + + L+ + L + GHTD+ Sbjct: 88 RKNQCSFKTGTDVLEAGCDQKLKNLTAALVEAKKQLDAGGVKNYQFEVSGHTDS---SGD 144 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN--SANRRIDIL 337 A N LS RA + L+ G+ I + G + + D + NRR +I Sbjct: 145 AAKNKALSEKRAAVIVKELVSRGIPRAEILAV-GRGSEQPLVKPDDTAAKKAKNRRYEIQ 203 Query: 338 VE 339 V Sbjct: 204 VR 205 >gi|323492706|ref|ZP_08097850.1| outer membrane protein [Vibrio brasiliensis LMG 20546] gi|323313081|gb|EGA66201.1| outer membrane protein [Vibrio brasiliensis LMG 20546] Length = 279 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 70/198 (35%), Gaps = 13/198 (6%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 +G C + +++ K+ + A + ++ L V Sbjct: 72 EGARWCFPAAVVQALEKQNRIARELEGGLMLDAANDIVIQRKRLNELELQL-DYVTSQAK 130 Query: 213 KGVLFETTRTGILISIIDQRNTPM-----FDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266 + ++IID+ + + F +S+ P+ + L + +L + + Sbjct: 131 CVPPMDENAFQQRLAIIDKLYSLLNVDNQFAFNSTEVNPKYMGHLARAANLLEQHSSLSL 190 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 ++ GH D+ N +L++ RA + L+ G+S +RI S + Sbjct: 191 AVTGHADSV---GDLAYNQKLAMGRAQQVKRYLIIFGLSPERIKTHS-VGDTLPLYEGES 246 Query: 327 MNSA--NRRIDILVEDRQ 342 NRR+ I V D Q Sbjct: 247 EGVRLTNRRVSIEVIDNQ 264 >gi|307719340|ref|YP_003874872.1| OmpA family protein [Spirochaeta thermophila DSM 6192] gi|306533065|gb|ADN02599.1| OmpA family protein [Spirochaeta thermophila DSM 6192] Length = 826 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 79/255 (30%), Gaps = 23/255 (9%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 V + + + ++ + ++ + K + S E Sbjct: 578 DTVPPEVSVSAEPVPFSPDGDGRDEVVAFIPEVRDEAGIESWELMITNKDRRQTFSGGGE 637 Query: 165 KSINKEENYFLPPLS-KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + F E+ + DL ++ + +V D V G Sbjct: 638 PPAQIVWDGFFESGDLAEQAHEYPVVFTVTDLGGNVAKASALVVTD-----VYVVIKDGG 692 Query: 224 ILISIIDQRNTPMFDKSS-----SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277 IS+ D P F E + L ++ +L + + GH + + Sbjct: 693 AYISVPDIHFAP-FTADYTDKVPPEIREENLRTLDEVAAMLKKFPQYTVQLEGHAVSLLW 751 Query: 278 RNIARDNWR-------LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 + R LS RA + + L+ GV R+ I G+ R + + Sbjct: 752 FDPERAKIEHQEVLIPLSRARAEAVRKALISRGVDPSRL-SIVGYGGSRPIVPFSDLKKR 810 Query: 331 --NRRIDILVEDRQG 343 NRR++ L++++ G Sbjct: 811 WVNRRVEFLLKEKSG 825 >gi|303237216|ref|ZP_07323786.1| OmpA family protein [Prevotella disiens FB035-09AN] gi|302482603|gb|EFL45628.1| OmpA family protein [Prevotella disiens FB035-09AN] Length = 704 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 56/167 (33%), Gaps = 34/167 (20%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 L + + + + I + + +D + PE+ L + ++L + Sbjct: 507 EELKVEPVKETKEYTLQFPLASIRVPVMIDNIFYDFDKATLRPESEAALDNLVKLLNENP 566 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR--- 319 I + HTD + A N L+ RA + L+K GVS DR+S + G+ + Sbjct: 567 NVTIELSAHTD---YLGRAEYNKNLAQRRADAVVAYLIKKGVSADRLSPV-GYGEGKPKT 622 Query: 320 --------------------------LKIASDPMNSANRRIDILVED 340 K + N NRR + +V Sbjct: 623 IRKKVAEKYPWLKEGQVLTEEFIKSLPKDKQEIANQMNRRTEFVVLR 669 >gi|238896049|ref|YP_002920785.1| putative outer membrane lipoprotein [Klebsiella pneumoniae NTUH-K2044] gi|262043847|ref|ZP_06016937.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|238548367|dbj|BAH64718.1| iron-regulated membrane protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259038817|gb|EEW39998.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 160 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 ++ +FDK+ P++ + + LA + + GHTD N LSL R Sbjct: 52 DSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTDNY---GEDSYNEALSLKR 108 Query: 292 AYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A S + V + G ++D + NRR+ +++ Sbjct: 109 ANSVADAWAEGAHVPRSNLVT-RGLGKKYPIASNDTAAGRAENRRVTVVI 157 >gi|296445979|ref|ZP_06887929.1| peptidoglycan-associated lipoprotein [Methylosinus trichosporium OB3b] gi|296256497|gb|EFH03574.1| peptidoglycan-associated lipoprotein [Methylosinus trichosporium OB3b] Length = 167 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ SS L K + L ++ GH D N+ L R Sbjct: 58 DRIYFETDSSELTSTAQTTLDKQVDWLQRYGRYSFTVEGHADER---GTREYNFALGARR 114 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A A L+ G+S RI IS + R S NRR Sbjct: 115 AEVAKNYLVSRGLSAARIRTIS-YGKERPVAVCDDISCWSQNRR 157 >gi|53719284|ref|YP_108270.1| hypothetical protein BPSL1659 [Burkholderia pseudomallei K96243] gi|52209698|emb|CAH35657.1| putative exported protein [Burkholderia pseudomallei K96243] Length = 299 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 +F + L + + S + + G+TD N RLS Sbjct: 184 LFAFDKGGFEDISADGRRQLGDLVASIKAKIFSINHLIVTGYTDRL---GSDEHNARLSS 240 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 +RA + ++ G+ +I+ + G + + NRR++I ++ + Sbjct: 241 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 299 >gi|330949998|gb|EGH50258.1| OmpA/MotB [Pseudomonas syringae Cit 7] Length = 300 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 33/108 (30%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L + L V I GH+D N LS RA + Sbjct: 178 FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 G+ E +I + ++ + NRR+++ +E Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLAPNTNEANRARNRRVNVHLER 281 >gi|260891273|ref|ZP_05902536.1| OmpA family protein [Leptotrichia hofstadii F0254] gi|260858949|gb|EEX73449.1| OmpA family protein [Leptotrichia hofstadii F0254] Length = 367 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294 F +P L+ I V+ + SI GHTD++ A N +LS+ RA + Sbjct: 251 FKVDGRVPNEGEAADLRTIAGVINQFADGGSIDFVGHTDST---GSAAYNQKLSVARAQN 307 Query: 295 AYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 ++L + G+ I+G +D + NRR+++ ++ Sbjct: 308 VAKLLREYGLKNTISYGTITGQGESNPADTNDTVEGRYNNRRVELFFQN 356 >gi|225011410|ref|ZP_03701848.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A] gi|225003913|gb|EEG41885.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A] Length = 370 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 71/216 (32%), Gaps = 16/216 (7%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 I L+ ++++ + + + + ++ L K Sbjct: 163 PIQKLAANEKTTAEEIKGKYRLITRQVEVSPAQTRQEVIPSKSQTLERQILVTDETTKEI 222 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + I L + V G L+ I + S+ + E I Sbjct: 223 TVPAESTEIIKKILVKKGGTTAWREVPCTIPERGELLPIHYALGSAALTSKSTKIIDEYI 282 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 + K + + ++ I HTD+ N LS RA S + L+ G+++ R+ Sbjct: 283 LARMKADKNI-----LVEIGSHTDSR---GTDSLNMSLSERRAKSVVEYLISKGINKQRL 334 Query: 310 SKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 G+ +L S+ +++ NRR + V Sbjct: 335 IA-EGYGEDKLLNDCENGVDCSESLHANNRRTEFKV 369 >gi|86748022|ref|YP_484518.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] gi|86571050|gb|ABD05607.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] Length = 212 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 76/207 (36%), Gaps = 18/207 (8%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 S D + +++ ++ ++ + L + Sbjct: 15 GVGTALSFGAGMAFAADDATEDQILRALAPKKPLTRSLSPSRPAAEPAERQFVDTLRNRP 74 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + +LS + I + + I+ F+ +S+ + ++ +G+ L Sbjct: 75 TRSLSSSEREQIAAMAK-DKPNIDLEIT---------FEYNSANISRKAEPAVEALGKAL 124 Query: 260 AH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315 A+ + GHTD+ N LS RA + +VL++ G++ + + G+ Sbjct: 125 ANPDLRGSTFVVAGHTDSI---GSDNYNQDLSERRADTIKRVLVEKYGIAGADLVTV-GY 180 Query: 316 AHHRLKIASDPMNSANRRIDILVEDRQ 342 + K A +P +++NRR+ ++ Q Sbjct: 181 GESKPKNADNPTDASNRRVQVVNMTSQ 207 >gi|297538334|ref|YP_003674103.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301] gi|297257681|gb|ADI29526.1| OmpA/MotB domain protein [Methylotenera sp. 301] Length = 377 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 15/117 (12%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSLDRAY 293 +F S +L + L +E + G+TD N +LS RA Sbjct: 256 LFGFDKSKLQDGAKPILDGVVAKLKEHSEFKLVMVTGYTDRI---GSEAYNQKLSEHRAN 312 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILVEDRQ 342 ++ G+ R+ + G + + NRR+ +++++ Q Sbjct: 313 EVKDYIVSQGIDAGRLQAV-GKGESEAVVDCKGIKGKKLISCLAPNRRV-VILDEEQ 367 >gi|291326447|ref|ZP_06124556.2| peptidoglycan-associated lipoprotein [Providencia rettgeri DSM 1131] gi|291314244|gb|EFE54697.1| peptidoglycan-associated lipoprotein [Providencia rettgeri DSM 1131] Length = 180 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q NT F PE +L L + + + GH D N L Sbjct: 74 QNNTVYFGFDKYNVSPEYAEMLDAHAAFLRSNPSVRVVVEGHADER---GTPEYNIALGE 130 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 RA + L GVS D++S +S + + + + NRR I Sbjct: 131 RRANAVKMYLQSKGVSGDQVSLVS-YGKEKPAVLGHTEADYAKNRRAVI 178 >gi|110636551|ref|YP_676758.1| outer membrane peptidoglycan-associated lipoprotein [Cytophaga hutchinsonii ATCC 33406] gi|110279232|gb|ABG57418.1| outer membrane protein, peptidoglycan-associated lipoprotein [Cytophaga hutchinsonii ATCC 33406] Length = 656 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 8/112 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++D P+ V L + ++ + E I + HTD A N L+ R Sbjct: 537 RNILYDYDKWDIRPDAAVELDTMVMLMNANPEIQIELGSHTDER---GSAEYNRVLAQKR 593 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRIDILVED 340 A +A ++ G+S+DRI G+ I + + NRR V + Sbjct: 594 AQAAVDYIIAHGISKDRIIA-KGYGEDEPAIRNAKTEADHQTNRRTTFKVLN 644 >gi|170725642|ref|YP_001759668.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908] gi|169810989|gb|ACA85573.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908] Length = 367 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289 + F +SS+ E+ ++K+ + + I GH A N LS Sbjct: 250 DVGSIQFANNSSVVKNESYQQIEKLANYMNQHPKSTVLISGHASDV---GKAEYNMMLSD 306 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRID 335 RA + ++L++ G+++DR+ GF + I + ANRRI+ Sbjct: 307 KRANAVAKILVEKYGIAQDRVEA-KGFGITQPIIEGSSPAANKANRRIE 354 >gi|90025228|gb|ABD85117.1| OmpA [Actinobacillus suis H91-0380] Length = 373 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +A+ T I + G+TD N +LS Sbjct: 250 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 306 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338 RA + L+ G + ++ + G+ D + +RR+++ V Sbjct: 307 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 365 Query: 339 EDRQ 342 + + Sbjct: 366 QGSK 369 >gi|75676006|ref|YP_318427.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255] gi|74420876|gb|ABA05075.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255] Length = 321 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 8/150 (5%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L+D A + + + V + I + +FD ++ Sbjct: 172 LKDRALALLEITEAKPMEERMVVVESSAMQRDIASQGRVAIHGILFDFDKDTMRSDSKPQ 231 Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRI 309 L +I ++L E + I GHTD+ + N LS RA S + L + GV+ R+ Sbjct: 232 LDEIAKLLKAQPELKVLIVGHTDS---KGALDYNRDLSYRRARSIVESLSREHGVAAARL 288 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDIL 337 + + G + NRR++++ Sbjct: 289 TPL-GVGMAAPMATNRTEEGRALNRRVELV 317 >gi|187927866|ref|YP_001898353.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12J] gi|241662454|ref|YP_002980814.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12D] gi|187724756|gb|ACD25921.1| OmpA/MotB domain protein [Ralstonia pickettii 12J] gi|240864481|gb|ACS62142.1| OmpA/MotB domain protein [Ralstonia pickettii 12D] Length = 218 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 15/118 (12%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ PE L + L + I GHTD+ + N RLS+ RA + Sbjct: 102 LFDFDKAVLKPEGKAKLDDLVSKLNGINLEVVIAVGHTDSF---GSDKYNDRLSVRRAEA 158 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA---------NRRIDILVEDRQ 342 L+ G+ +R+ G +LK+ + NRR+D+ V + Sbjct: 159 VKGYLVSKGIEANRVYT-EGKGKRQLKVDPKSCKGARKAQIACQQPNRRVDVEVVGTR 215 >gi|157960193|ref|YP_001500227.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC 700345] gi|157845193|gb|ABV85692.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345] Length = 201 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 Q +F S P+ ++ I + ++ GH + + N LS Sbjct: 73 QELKILFANDSYYIDPQYYPQVEVIASFMQKFPNTQAVIEGHCSKT---GSHQHNQVLSQ 129 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 +RA + +L + G+ R+S + G++ R + ++ NRR+ Sbjct: 130 NRANAVSSLLAERFGIDSGRLSAV-GYSFDRPIDPTHTASAHKINRRV 176 >gi|315654589|ref|ZP_07907495.1| OmpA/MotB domain protein [Mobiluncus curtisii ATCC 51333] gi|315491053|gb|EFU80672.1| OmpA/MotB domain protein [Mobiluncus curtisii ATCC 51333] Length = 308 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 73/201 (36%), Gaps = 7/201 (3%) Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 N L + G ++ ++ P E+I AM+ L + K++ Sbjct: 62 QIANPLQTNGGLGILAGSTSAVQLGTLMGNLNQNPESQPERIQAMREASHLNSIKKQVEE 121 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L + + T G+++ ++ F + P VL+ I L Sbjct: 122 QLKDAGKEG---SLAMRITDKGLVLGMVANDTY--FKTGDATIQPTAREVLKAISPTLMS 176 Query: 262 STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 E I+I G+ D P + N+ L+ RA L GV ++ IS A H+ Sbjct: 177 IEEGIAIEGYADPQPIASAKFPSNYHLASARAIEVLIALKDDGVPGTKLRSISYGADHQT 236 Query: 321 KI-ASDPMNSANRRIDILVED 340 + + NRR+DI++ Sbjct: 237 EATPGQDAWAFNRRVDIVIMS 257 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 49/167 (29%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ P+N W + Y D +TV+M FLV++ I+ D + + + Sbjct: 3 KRKHECPEPDNTERWAVSYLDMITVMMCLFLVLYAISQVDQGKLSKLRTSLAAGFNSTIQ 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + + + N Q + N+I Q Sbjct: 63 IANPLQTNGGLGILAGSTSAVQLGTLMGNLNQNPESQPERIQAMREASHLNSIKKQVEEQ 122 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + K K L + K + + P ++E + A Sbjct: 123 LKDAGKEGSLAMRITDKGLVLGMVANDTYFKTGDATIQPTAREVLKA 169 >gi|162451691|ref|YP_001614058.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] gi|161162273|emb|CAN93578.1| outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 632 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 20/120 (16%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294 F I L ++ L+ + +VL + ++ + GHTD R N LS R S Sbjct: 399 FATDKDIILEDSNSTLEAVAQVLIDNPDIREVRIEGHTD---VRATDLYNMALSQRRVAS 455 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNS----------ANRRIDILVED 340 L+ GV R+ + G+ H + P + NRR+ + Sbjct: 456 VMAYLIAKGVESSRLQAV-GYGHTQPIYDDTGCQGPDDQLSPDCQFMTSKNRRVVFRILR 514 >gi|150026440|ref|YP_001297266.1| OmpA family outer membrane protein [Flavobacterium psychrophilum JIP02/86] gi|149772981|emb|CAL44465.1| Probable outer membrane protein, OmpA family [Flavobacterium psychrophilum JIP02/86] Length = 624 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 9/110 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSA 295 FD + S E L K+ V+ E++ HTD+ + N LS RA S Sbjct: 519 FDFNKSNITQEGAAELDKLVAVMTKYPEMVIFAKSHTDSR---GDDKYNMLLSDRRAKST 575 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNSANRRIDILVEDR 341 Q ++ G++ +RI GF K+ ++ + NRR + ++ + Sbjct: 576 VQYIISKGIAVNRI-TGEGFGKSEPKVQCDKCTEAEHQKNRRSEFMIVKK 624 >gi|145219968|ref|YP_001130677.1| OmpA/MotB domain-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145206132|gb|ABP37175.1| OmpA/MotB domain protein [Chlorobium phaeovibrioides DSM 265] Length = 152 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 +D + + L K + + + GH D + N L R Sbjct: 47 GDVFYDFDQASIRMDAAEQLSKNAAWMQEKSSKRVVIEGHCDER---GTSEYNMALGERR 103 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A A + ++ GV +R++ +S + R +++ + NRR Sbjct: 104 ASMAKEYMVNLGVQPERMTTVS-YGEERPFAAGSNEEAWALNRR 146 >gi|309781036|ref|ZP_07675774.1| outer membrane protein A [Ralstonia sp. 5_7_47FAA] gi|308920102|gb|EFP65761.1| outer membrane protein A [Ralstonia sp. 5_7_47FAA] Length = 218 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 15/118 (12%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ PE L + L + I GHTD+ + N RLS+ RA + Sbjct: 102 LFDFDKAVLKPEGKAKLDDLISKLNGINLEVVIAVGHTDSF---GSDKYNDRLSVRRAEA 158 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA---------NRRIDILVEDRQ 342 L+ G+ +R+ G +LK+ + NRR+D+ V + Sbjct: 159 VKGYLVSKGIEANRVYT-EGKGKRQLKVDPKSCKGARKAQIACQQPNRRVDVEVVGTR 215 >gi|94987133|ref|YP_595066.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Lawsonia intracellularis PHE/MN1-00] gi|94731382|emb|CAJ54745.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Lawsonia intracellularis PHE/MN1-00] Length = 162 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 FD PE +LQK E+L + I G+ DA N L Sbjct: 54 DGIIYFDFDKYDIKPEYRDMLQKKAELLKEYPCIRVRIEGNCDAR---GTQEYNLALGER 110 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 RA +AY+ L+ GV+ ++ IS F R + + NRR D + + Sbjct: 111 RARAAYEYLVMLGVNPSQLEIIS-FGKERPAVEGTGPAVWAKNRRDDFRIIAK 162 >gi|258545746|ref|ZP_05705980.1| peptidoglycan-associated lipoprotein [Cardiobacterium hominis ATCC 15826] gi|258518991|gb|EEV87850.1| peptidoglycan-associated lipoprotein [Cardiobacterium hominis ATCC 15826] Length = 189 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 7/111 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLS 288 D+ F SS + V+++ + L + + GHTD N L Sbjct: 82 DKDRIIYFSYDSSAIDSRSEAVIREHAKYLRAHPQTRVVLEGHTDER---GTREYNIGLG 138 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RAYS + + +G+S ++ ++ + R + NRR I+ Sbjct: 139 ERRAYSVKERFVAAGISPQQM-RVLSYGEERPAAFGSSEEDYAKNRRAVIV 188 >gi|288225943|gb|ADC44456.1| OmpA [Enterobacter sp. i1] Length = 111 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 7/93 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + PE L ++ L++ + + G+TD N LS Sbjct: 23 KSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRI---GSDAYNQGLS 79 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 RA S L+ G+ D+IS G Sbjct: 80 ERRAQSVVDYLISKGIPADKISA-RGMGESNPV 111 >gi|37704656|gb|AAR01600.1| OprF [Pseudomonas sp. MFY146] Length = 297 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD ++ + + ++ + + + ++ G+TD+ N +LS RA S Sbjct: 215 FDFDKAVVKSQYLPDIKNVAQFMQQYPATSTTVNGYTDSV---GTDAYNLKLSQRRADSV 271 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI 322 Q L++ GVS R+ + G Sbjct: 272 RQALVQQGVSPSRVDAV-GHGKSDPVA 297 >gi|313892856|ref|ZP_07826435.1| OmpA family protein [Veillonella sp. oral taxon 158 str. F0412] gi|313442610|gb|EFR61023.1| OmpA family protein [Veillonella sp. oral taxon 158 str. F0412] Length = 341 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + L + + + G+ D + N LS R Sbjct: 239 FDSDQDVARADQYPNLTAAVNAAHQYSQDQVKLLGNADTD---ANPQYNIGLSERRVQYV 295 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 Q L+ +GVS DR I+ + + + NRR+D+ + Sbjct: 296 AQYLVNNGVSADRFIGIA-NGDTKPVATNSTAAGKAENRRVDVYIHR 341 >gi|295110189|emb|CBL24142.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Ruminococcus obeum A2-162] Length = 331 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/337 (11%), Positives = 98/337 (29%), Gaps = 65/337 (19%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + N W+ Y+D M ++ F+++ + Sbjct: 2 RKKKKSEGNGFNVWR-SYSDMMAGVLLLFVLIMCVTLFQAQK------------------ 42 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + S+ E K ++ + KQ E + + +Q Sbjct: 43 -----------------SYNESLQERDEKIAIQEQYTQELLDKQNAIDEKDETLQNQDEQ 85 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + L ++ + L ++S + L ++ ++ ++ + Sbjct: 86 LKTQDEKLAEQQKQLEALAAKLKEQESTLNAQQTA---LDEKTAQLKDQQVQIDQIIGVK 142 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI---- 255 + + L + + + +++ + MFD + L++I Sbjct: 143 ADVIEALKNEFSKNNINVDIDAQTGALTL---EASVMFDYDQAELTDSGKQALEQILPIY 199 Query: 256 -----GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM---------K 301 + I I G+TD N +LS R+ + Q L+ + Sbjct: 200 CKVLLQDDYKDYLAEIIIDGYTDTD---GDYSYNLQLSQQRSLAVAQYLIDIQGNFLNDE 256 Query: 302 SGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336 ++ ++G + + A+RR+++ Sbjct: 257 QSQELEKYLTVNGHSMANPVLDADGNVDKDASRRVEV 293 >gi|218676336|ref|YP_002395155.1| putative protein F-related protein [Vibrio splendidus LGP32] gi|218324604|emb|CAV26143.1| putative protein F-related protein [Vibrio splendidus LGP32] Length = 203 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ P P L +G L+ ++ + GHTD + R N LS RA Sbjct: 99 FKTGSTSPEPAYNNWLDTLGSYLSRRQDIDVVIEGHTDNT---GSDRVNDPLSEQRAKEV 155 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 L + VS R GF + + + NRR+++++ Sbjct: 156 KARLESNYVS-SRAIYTRGFGEYVPACNNASVQGKACNRRVELML 199 >gi|300112859|ref|YP_003759434.1| peptidoglycan-associated lipoprotein [Nitrosococcus watsonii C-113] gi|299538796|gb|ADJ27113.1| peptidoglycan-associated lipoprotein [Nitrosococcus watsonii C-113] Length = 187 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 F+ SS + +++ G LA ++ I GHTD N L RA Sbjct: 82 VYFEFDSSEIQQDDRPIVEAHGGYLAKHPDIKIILEGHTDER---GSREYNLALGERRAN 138 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + +++ G SE+++ ++ + R + + NRR++IL Sbjct: 139 AVRSLILLMGASEEQV-EVVSYGEERPAVDGQDEGAWQLNRRVEIL 183 >gi|207728190|ref|YP_002256584.1| peptidoglycan-associated lipoprotein precursor [Ralstonia solanacearum MolK2] gi|206591435|emb|CAQ57047.1| peptidoglycan-associated lipoprotein precursor [Ralstonia solanacearum MolK2] Length = 172 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + + FD S E +L + L + I+G+TD + N L Sbjct: 67 KRSVYFDFDSYTVKSEYQGLLGQHARYLQSHNQRKVLIQGNTDER---GTSEYNLALGQK 123 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 RA + + L GV + ++ +S + + + + NRR DI+ Sbjct: 124 RAEAVRRALSSQGVPDSQMEAVS-LGKEKPQATGHDEESWAQNRRSDIV 171 >gi|193212308|ref|YP_001998261.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB 8327] gi|193085785|gb|ACF11061.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB 8327] Length = 108 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 FD SI PE+ L+ E +A + + GH D A N L R Sbjct: 3 GDIFFDFDRSIITPESQAQLRDNAEWMAQNKSKSLVCEGHCDER---GTAEYNMALGERR 59 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 A SA + LM GVS DR+S IS + + + S NRR+ + Sbjct: 60 AESAKESLMSLGVSGDRLSTIS-YGEEKPFAIGHDEAAWSQNRRVHFV 106 >gi|167719458|ref|ZP_02402694.1| ompA family protein [Burkholderia pseudomallei DM98] Length = 277 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 +F + L + + S + + G+TD N RLS Sbjct: 162 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRL---GSDEHNARLSS 218 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 +RA + ++ G+ +I+ + G + + NRR++I ++ + Sbjct: 219 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 277 >gi|167738461|ref|ZP_02411235.1| hypothetical protein Bpse14_10350 [Burkholderia pseudomallei 14] gi|167815654|ref|ZP_02447334.1| hypothetical protein Bpse9_10954 [Burkholderia pseudomallei 91] gi|254188891|ref|ZP_04895402.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] gi|157936570|gb|EDO92240.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] Length = 277 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 +F + L + + S + + G+TD N RLS Sbjct: 162 LFAFDKGGFEDISADGRRQLGDLVASIKAKIFSINHLIVTGYTDRL---GSDEHNARLSS 218 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 +RA + ++ G+ +I+ + G + + NRR++I ++ + Sbjct: 219 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 277 >gi|27382457|ref|NP_773986.1| hypothetical protein blr7346 [Bradyrhizobium japonicum USDA 110] gi|27355628|dbj|BAC52611.1| blr7346 [Bradyrhizobium japonicum USDA 110] Length = 316 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 8/149 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 Q+ + + K V G+ + FD ++ PE+ L Sbjct: 170 QNNQDIYAQVTVAELGAIANKMVDAAAMAKGLGETGHIALYGIYFDTDKAVLKPESRPTL 229 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 ++I ++L + + I GHTD+ N LS RA + L KS +++ R+ Sbjct: 230 EQIAKLLTSQPQLNVFIVGHTDSQ---GAYEYNLDLSKRRAEAVAAELAKSFRIAQARL- 285 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDIL 337 + +G ++ + NRR++++ Sbjct: 286 RTAGVGLLAPVGSNATDAGRALNRRVELV 314 >gi|313203560|ref|YP_004042217.1| ompa/motb domain protein [Paludibacter propionicigenes WB4] gi|312442876|gb|ADQ79232.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4] Length = 778 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 11/109 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 ++ + P+ L + +L I + +TD+ ++ N LS RA S Sbjct: 631 YNFNKWDIRPDATPTLDSLITLLKIYPIKIELGSYTDSR---GTSQYNDTLSQKRAESVV 687 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 L+K G+ +R+ + G + S+ + NRR ++ V Sbjct: 688 AYLVKHGIDRNRLIAV-GHGERNILNRCIDGVSCSENEHQVNRRTEVKV 735 >gi|332704092|ref|ZP_08424180.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332554241|gb|EGJ51285.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 253 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 90/252 (35%), Gaps = 11/252 (4%) Query: 96 NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155 ++D + + + ++ + + + Sbjct: 3 KQLDETPPVPPRRTQEEAPEEGAPGWMTTFADMMSLLLCFFILLLSFSSMDVAKYEKVLG 62 Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAM-KRKKRLQDLAKKISSTLSGLVADNIVKG 214 L + ++++ + E P +S+E + +K + L + + V + Sbjct: 63 SLKYAFGVQRTPSDSEFASPPGVSQELSENLSADQKDILGLVLVLRKLVHQDVDVKDLAV 122 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274 V + + + MFD S+ PE + ++ K +L + IRGHTD+ Sbjct: 123 VSSDRNGALLRVQ-----AGAMFDPGSAALKPEAVKIIDKAVTILKERNFSVVIRGHTDS 177 Query: 275 SPFRNIAR-DNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSA-- 330 + NW LS RA ++ +++++ G + +RI I G+A R + + + Sbjct: 178 HIVHSAQFPSNWELSAARAAASARLVIERGAIDTNRIKAI-GYADSRPLVPNSTEENRAF 236 Query: 331 NRRIDILVEDRQ 342 NRR++ Sbjct: 237 NRRVEFYFHKPN 248 Score = 42.3 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 ++ + W +AD M++L+ FF+++ ++ D + + T Sbjct: 14 RRTQEEAPEEGAPGWMTTFADMMSLLLCFFILLLSFSSMDVAKYEKVLGSLKYAFGVQRT 73 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDE 104 S F +PP S + +LS D+ Sbjct: 74 PSDSEFA--SPPGVSQELSENLSADQ 97 >gi|302062033|ref|ZP_07253574.1| ompA family protein [Pseudomonas syringae pv. tomato K40] Length = 380 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 82/271 (30%), Gaps = 11/271 (4%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 ++ A+ G + + SS D + K +T Sbjct: 20 QTPQSDSAATGGHWWQFGSGSESSDAGTDAKAPAPAPAPAPVAKAAATPAAAAGAESSGP 79 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ S + K K + + + + + ++ Sbjct: 80 WYWPFGSNDNAQAKPDAVASKPADKPAAPAMVAKSETDTKWWWPFGAEGQKDEPKALPMP 139 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249 + + L A E + I+ F+ L P T+ Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196 Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + ++ +V+ + I GH D N ++S +RA S + SG+ +R Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERNR 253 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337 +S+ G + A+D + NRR++IL Sbjct: 254 LSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 283 >gi|296108643|ref|YP_003620344.1| hypothetical protein lpa_04343 [Legionella pneumophila 2300/99 Alcoy] gi|295650545|gb|ADG26392.1| Hypothetical protein lpa_04343 [Legionella pneumophila 2300/99 Alcoy] Length = 294 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S + L++I + + +VI + GH D S + N +S RA S Sbjct: 190 FGVDSKLLSDADKAQLRRIAQYVDADVQIDVIKVIGHADDSGRKG---YNNAISQYRAES 246 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 L++ GV + ++ I+ + +D +ANRR+ + + + Sbjct: 247 VKNYLIRLGVPQRKL-SITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294 >gi|254428548|ref|ZP_05042255.1| peptidoglycan-associated lipoprotein, putative [Alcanivorax sp. DG881] gi|196194717|gb|EDX89676.1| peptidoglycan-associated lipoprotein, putative [Alcanivorax sp. DG881] Length = 190 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 F S+ L+ L ++ I + GH D N LS Sbjct: 79 DSRVIYFAFDSNTVPAAAFETLRAHATYLKNNANAKIRLEGHADER---GTREYNVALSE 135 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 R+ + + L GV+ ++ +S + + + + NRR++I Sbjct: 136 RRSKAVEKFLRVQGVASSQLEIVS-YGEEKPAAFGHGEMDWAKNRRVEI 183 >gi|28871259|ref|NP_793878.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854509|gb|AAO57573.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 381 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 82/271 (30%), Gaps = 11/271 (4%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 ++ A+ G + + SS D + K +T Sbjct: 20 QTPQSDSAATGGHWWQFGSGSESSDAGTDAKAPAPAPAPAPVAKAAATPAAAAGAESSGP 79 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ S + K K + + + + + ++ Sbjct: 80 WYWPFGSNDNAQAKPDAVASKPADKPAAPAMVAKSETDTKWWWPFGAEGQKDEPKALPMP 139 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249 + + L A E + I+ F+ L P T+ Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196 Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + ++ +V+ + I GH D N ++S +RA S + SG+ +R Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERNR 253 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337 +S+ G + A+D + NRR++IL Sbjct: 254 LSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 283 >gi|300704849|ref|YP_003746452.1| peptidoglycaN-associated lipoprotein, protein pal, component of tol-pal system [Ralstonia solanacearum CFBP2957] gi|299072513|emb|CBJ43863.1| Peptidoglycan-associated lipoprotein, protein pal, component of tol-pal system [Ralstonia solanacearum CFBP2957] Length = 172 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + + FD S E +L + L + I+G+TD + N L Sbjct: 67 KRSVYFDFDSYTVKSEYQGLLSQHARYLQSHNQRKVLIQGNTDER---GTSEYNLALGQK 123 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 RA + + L GV + ++ +S + + + + NRR DI+ Sbjct: 124 RAEAVRRALSSQGVPDSQMEAVS-LGKEKPQATGHDEESWAQNRRSDIV 171 >gi|167894145|ref|ZP_02481547.1| ompA family protein [Burkholderia pseudomallei 7894] Length = 277 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 +F + L + + S + + G+TD N RLS Sbjct: 162 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRL---GSDEHNARLSS 218 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 +RA + ++ G+ +I+ + G + + NRR++I ++ + Sbjct: 219 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 277 >gi|153830883|ref|ZP_01983550.1| putative outer membrane protein [Vibrio cholerae 623-39] gi|148873634|gb|EDL71769.1| putative outer membrane protein [Vibrio cholerae 623-39] Length = 212 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 7/161 (4%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + LQD + L D + + S Q+ +F SS Sbjct: 42 ANQIADLQDDDRDGVINARDLCPDTPKGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIE 101 Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P + ++++ E L I ++G+ A N LS R+ + L++ GV Sbjct: 102 PAFLTQIRQMAEFLQTYPSTSIELQGYASKV---GSAEHNLALSKQRSEAVRDQLLRYGV 158 Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 + +R++ I G+ L++ D ++ NRR+ V +G Sbjct: 159 APERVN-IVGYGDSVLEVEGTDDVSHARNRRVTATVVGYKG 198 >gi|146279022|ref|YP_001169181.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145557263|gb|ABP71876.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 316 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ T L ++ E L + GHTDA N LS RA S Sbjct: 212 FASGSADLEDRTYPALAELAEWLKQDPARQVVIVGHTDA---SGGLEGNVSLSRARAASV 268 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340 Q L+ + GV + ++S G + + ++ NRR+++++ Sbjct: 269 RQRLVSRHGVPDAQVSA-EGVGYLAPRASNRTEEGRSRNRRVEVMLLA 315 >gi|83746170|ref|ZP_00943224.1| Peptidoglycan-associated lipoprotein [Ralstonia solanacearum UW551] gi|207744075|ref|YP_002260467.1| peptidoglycan-associated lipoprotein precursor [Ralstonia solanacearum IPO1609] gi|83727136|gb|EAP74260.1| Peptidoglycan-associated lipoprotein [Ralstonia solanacearum UW551] gi|206595479|emb|CAQ62406.1| peptidoglycan-associated lipoprotein precursor [Ralstonia solanacearum IPO1609] Length = 172 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + + FD S E +L + L + I+G+TD + N L Sbjct: 67 KRSVYFDFDSYTVKSEYQGLLSQHARYLQSHNQRKVLIQGNTDER---GTSEYNLALGQK 123 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 RA + + L GV + ++ +S + + + + NRR DI+ Sbjct: 124 RAEAVRRALSSQGVPDSQMEAVS-LGKEKPQATGHDEESWAQNRRSDIV 171 >gi|160897524|ref|YP_001563106.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1] gi|160363108|gb|ABX34721.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1] Length = 174 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 7/107 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + FD + +++ + L + +RGHTD N L R Sbjct: 69 HIVYFDFDAYTIRNSDRAIVESHAQWLRSNPGRSVMLRGHTDRR---GGIEYNLALGQKR 125 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 A + L GV+ R+ +S + RL + NRR++ Sbjct: 126 ADAVRNSLQLLGVNPARVESVS-YGKERLADEGTSEEAHQRNRRVEF 171 >gi|940548|emb|CAA81039.1| Outer membrane or porin protein [Leptothrix discophora] Length = 84 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 GHTD+ N +LS+ RA + + L+ G+ ++R+ + + Sbjct: 9 VGHTDSD---GSDALNDKLSVSRAEAVKKYLVSKGIEQNRVYT-EAKGEKQPVADNSTKE 64 Query: 329 S--ANRRIDI 336 NRR++I Sbjct: 65 GKQKNRRVEI 74 >gi|148261844|ref|YP_001235971.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5] gi|146403525|gb|ABQ32052.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5] Length = 203 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 10/107 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ P+ + L ++G L T + GHTD + A N LS RA Sbjct: 97 FATGSAKLTPQAVTELDRLGRALTDKTLAAYHFRVVGHTDTT---GAASTNLALSQARAA 153 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 + LM + R+ +G L + + P N ANRR+ I+ Sbjct: 154 AVKTYLMSKFDIPATRLQA-TGVGEADLLVPTGPNVANRANRRVQII 199 >gi|54298967|ref|YP_125336.1| hypothetical protein lpp3034 [Legionella pneumophila str. Paris] gi|53752752|emb|CAH14187.1| hypothetical protein lpp3034 [Legionella pneumophila str. Paris] Length = 294 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S + LQ+I + + +VI I GH D S + N +S RA S Sbjct: 190 FGVDSKLLSDADKAQLQRIAQYVDADVQIDVIKIIGHADDSGRKG---YNNAISQYRAES 246 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 L++ GV + ++ I+ + +D +ANRR+ + + + Sbjct: 247 VKNYLIRLGVPQRKL-SITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294 >gi|266621919|ref|ZP_06114854.1| putative flagellar motor protein MotB [Clostridium hathewayi DSM 13479] gi|288866392|gb|EFC98690.1| putative flagellar motor protein MotB [Clostridium hathewayi DSM 13479] Length = 283 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 65/217 (29%), Gaps = 14/217 (6%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 NI L + + + ++ S R Sbjct: 38 NISKLEEIAAAMQRQLGIESTNDLEDVPQDLKYPSISEGAGAPEGEGSQFNTGTGGGARS 97 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +A S +N+ V I +N +F S++ + Sbjct: 98 ASSLAMADMAKDIQSYFQMENLDAVVSDSENAVYIRF-----KNDLLFAPDSAVLQENSK 152 Query: 250 VVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 +L +G +L + I I GHT + N ++ LS +RA + L G+ Sbjct: 153 SMLDALGIMLKDRQDEIMAIYINGHT--AQAANSLINDRLLSSERADNVAIYLEDHVGLE 210 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 ++ G+ + + NRR+D+++ Sbjct: 211 PKKLI-CRGYGKYYPIADNSTKEGRELNRRVDMIILG 246 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 67/217 (30%), Gaps = 9/217 (4%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +KK+ W YAD +T+++ FF++++ I+ + + I Sbjct: 1 MKKRR----EEGGGQEWLNTYADMITLVLTFFVLLYSISNVNISKLEEIAAAMQ-----R 51 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 + D ++ P+ I + S + ++ Sbjct: 52 QLGIESTNDLEDVPQDLKYPSISEGAGAPEGEGSQFNTGTGGGARSASSLAMADMAKDIQ 111 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S +++ DSE + DL + + + + M + ++ + +A Sbjct: 112 SYFQMENLDAVVSDSENAVYIRFKNDLLFAPDSAVLQENSKSMLDALGIMLKDRQDEIMA 171 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 I+ + I +L + I + D Sbjct: 172 IYINGHTAQAANSLINDRLLSSERADNVAIYLEDHVG 208 >gi|188997203|ref|YP_001931454.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932270|gb|ACD66900.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 260 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 16/161 (9%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 KI K ++ K + ++ + + + F + Sbjct: 108 PKIPDAIEKAKIAQNKKPEKLDIGAKEKESPKTYKSTDAITQPVRVH---------FYLN 158 Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 SS E + L + + L + + I+G+TD + N +L+L RA + Q L Sbjct: 159 SSKIKKEYLPYLNIVAKYLKTHPDVKVKIKGYTDNI---GSKKYNDKLALKRAKTVKQYL 215 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +K GVS +RI I G ++++ NRR + + Sbjct: 216 VKLGVSPNRIM-IDGVGKSEYIVSNNNELDRFTNRRAEFYI 255 >gi|114046783|ref|YP_737333.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7] gi|113888225|gb|ABI42276.1| OmpA/MotB domain protein [Shewanella sp. MR-7] Length = 191 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 8/110 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ + + L + L A++ +++ GHTD N++LSL RA Sbjct: 85 VYFEFAIAEVDLSQWKALALVKAFLDANTETRLTLVGHTD---IVGTPEFNYQLSLRRAQ 141 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 + ++L++ G + +R + G + NRR+ +V + Sbjct: 142 NVKRILVEDYGFNPNRF-TVIGKGISEPVADNHSSEGRRLNRRVQFIVNN 190 >gi|45758057|gb|AAO85787.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 372 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 249 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLSIQVNGYTDRI---GKEASNLKLSQ 305 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G + ++ + G+ D + +RR++I V Sbjct: 306 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 364 Query: 339 EDRQ 342 + + Sbjct: 365 QGSK 368 >gi|113969550|ref|YP_733343.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4] gi|113884234|gb|ABI38286.1| OmpA/MotB domain protein [Shewanella sp. MR-4] Length = 191 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 8/110 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ + + L + L A++ +++ GHTD N++LSL RA Sbjct: 85 VYFEFAIAEVDLSQWKALALVKAFLDANTETRLTLVGHTD---IVGTPEFNYQLSLRRAQ 141 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 + ++L++ G + +R + G + NRR+ +V + Sbjct: 142 NVKRILVEDYGFNPNRF-TVIGKGISEPVADNHSSEGRRLNRRVQFIVNN 190 >gi|114332455|ref|YP_748677.1| OmpA/MotB domain-containing protein [Nitrosomonas eutropha C91] gi|114309469|gb|ABI60712.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91] Length = 231 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD ++ P + L L + I G+TD N +LS+ RA Sbjct: 111 DALFDFDKAVLKPAGMQALDDFSRNLEGVNYDLIIAVGYTDRI---GSEAYNKKLSVRRA 167 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASD---PMNSA---N-----RRIDILVEDR 341 + L+ G+ DRI G + N RR++I V Sbjct: 168 EAVKNYLVSKGIGADRIFT-DGKGKANPVTGDSCQGTKATRTLINCLAPDRRVEIEVAGT 226 Query: 342 Q 342 + Sbjct: 227 R 227 >gi|297538999|ref|YP_003674768.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301] gi|297258346|gb|ADI30191.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301] Length = 180 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 13/158 (8%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSS 242 K+ ++AK ++ ++ V I ++ + N + FD Sbjct: 23 KEAPSNVAKMPVASPKQAEPESPPPAVTSSAPENKIEVNPLTDPNNILSKRSVYFDFDKY 82 Query: 243 IPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + PE +L+ + L E I I G+ D N L RA + + Sbjct: 83 VVKPEYRTLLEAHAKYLLSHPEKSIRIEGNADDR---GSREYNLALGQKRAVAVKSLANL 139 Query: 302 SGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 GV + +I IS + + K + + NRR DI+ Sbjct: 140 LGVPDKQIETIS-YGEEKPKATGEDETSWAENRRADIV 176 >gi|167586522|ref|ZP_02378910.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu] Length = 223 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD + P L + + + + G+TD + N RLSL Sbjct: 97 QADALFDFDKATLKPLGKQKLDDLAGKIQGMNTEVVVATGYTDRI---GSDKYNDRLSLR 153 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339 RA + L+ G+ ++I G N N RR+++ V Sbjct: 154 RAQAVKSYLVSKGIPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 210 Query: 340 DRQ 342 Q Sbjct: 211 GTQ 213 >gi|73539729|ref|YP_294249.1| OmpA [Ralstonia eutropha JMP134] gi|72117142|gb|AAZ59405.1| OmpA [Ralstonia eutropha JMP134] Length = 591 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 8/115 (6%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 ++ + + S P++ ++ E L I + GHTD + +R N Sbjct: 181 RVAFTEIAQQYAYPVQSRQLGPQSTPQDRQAVEGLKSRR--ILLIGHTDDT---GSSRLN 235 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 LS RA + + +GV+E ++ G + + + NRR++I+ Sbjct: 236 ADLSEQRARAVAALFRDAGVAESQLY-YQGAGETMPLADNRDEAGRAKNRRVEIV 289 >gi|34556944|ref|NP_906759.1| lipoprotein precursor [Wolinella succinogenes DSM 1740] gi|34482659|emb|CAE09659.1| LIPOPROTEIN PRECURSOR [Wolinella succinogenes] Length = 170 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 9/121 (7%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNI 280 ++ + Q + FD + V+ +VL + I G+TD Sbjct: 53 LIRELESQLKSVYFDFDKFNIRADMQPVVDGDAKVLTSAKAKGLTVKIEGNTDEW---GT 109 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 N+ L L RA + L+ GV + + IS + + + NRR+D + Sbjct: 110 DEYNYALGLKRAVAVRDALVAKGVDQSKTMLIS-YGESKPVCQEKSKECWAKNRRVDFKL 168 Query: 339 E 339 Sbjct: 169 L 169 >gi|313203569|ref|YP_004042226.1| ompa/motb domain protein [Paludibacter propionicigenes WB4] gi|312442885|gb|ADQ79241.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4] Length = 231 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 6/114 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 + +F + S + L K ++L + + +I GHTD N +LS + Sbjct: 110 DSGILFQTNKSALNTASKDALTKFAKILVANPTMDITIMGHTDNQ---GSLDVNQKLSQE 166 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 RA S L V+ + +I G + +ANRR+++ + + Sbjct: 167 RAQSVANFLQTQSVTATQFKEIIGKNFAEPVADNKTAAGRAANRRVEVYMYASE 220 >gi|188025753|ref|ZP_02959682.2| hypothetical protein PROSTU_01567 [Providencia stuartii ATCC 25827] gi|188020355|gb|EDU58395.1| hypothetical protein PROSTU_01567 [Providencia stuartii ATCC 25827] Length = 175 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 N F PE +L L ++ + + GH D N L Sbjct: 69 NNNIVYFGFDKYNVSPEYADMLDAHAAFLRNNPSVKVVVEGHADER---GTPEYNIALGE 125 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 RA + L GV+ D++S +S + + + + NRR I Sbjct: 126 RRANAVKMYLQSKGVAGDQVSLVS-YGKEKPAVLGHTEADYAKNRRAVI 173 >gi|161525435|ref|YP_001580447.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC 17616] gi|171316170|ref|ZP_02905394.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] gi|189349827|ref|YP_001945455.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616] gi|221201252|ref|ZP_03574292.1| OmpA family protein [Burkholderia multivorans CGD2M] gi|221206294|ref|ZP_03579307.1| OmpA family protein [Burkholderia multivorans CGD2] gi|221213575|ref|ZP_03586549.1| OmpA family protein [Burkholderia multivorans CGD1] gi|254252935|ref|ZP_04946253.1| OmpA/MotB [Burkholderia dolosa AUO158] gi|124895544|gb|EAY69424.1| OmpA/MotB [Burkholderia dolosa AUO158] gi|160342864|gb|ABX15950.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616] gi|171098679|gb|EDT43474.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] gi|189333849|dbj|BAG42919.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616] gi|221166364|gb|EED98836.1| OmpA family protein [Burkholderia multivorans CGD1] gi|221173603|gb|EEE06037.1| OmpA family protein [Burkholderia multivorans CGD2] gi|221179102|gb|EEE11509.1| OmpA family protein [Burkholderia multivorans CGD2M] Length = 222 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD + P L ++ + + + G+TD + N RLSL Sbjct: 96 QADALFDFDKATLKPLGKQKLDELASKIQGMNTEVVVATGYTDRI---GSDKYNDRLSLR 152 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339 RA + L+ GV ++I G N N RR+++ V Sbjct: 153 RAQAVKSYLVSKGVPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 209 Query: 340 DRQ 342 Q Sbjct: 210 GTQ 212 >gi|127512450|ref|YP_001093647.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4] gi|126637745|gb|ABO23388.1| OmpA/MotB domain protein [Shewanella loihica PV-4] Length = 286 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 75/235 (31%), Gaps = 14/235 (5%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 ++ K + + ++ + + S+ G TDL Sbjct: 54 TSRAGKDHDLNFSLDMWVKPDEVTSAKLMSMAPAWRPGVVSRPITDLTYQKYFSGEVPKK 113 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG-VLFETTRTGILISIIDQRNTP 235 + + A + + V + + ++ + + + Sbjct: 114 AAWSMLNELERGMQPTFYYADWYNRSSKVAVGLSAANFGRRYAEFKSCLANLLPYSFDDI 173 Query: 236 MF-----DKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLS 288 F + S + + K+ E L++ EV + I +TD+ N ++S Sbjct: 174 AFTVLTYEFGGSELTRYSKAQIAKVQEYLSYDPEVELVLIDAYTDSF---GGRSVNKKVS 230 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA S Q+ + +G+ +RI G R ++D + NRR+ I + Sbjct: 231 EKRANSVKQLFLSAGIPNERIHTY-GHGERRHVASNDTIDERARNRRVVIRLSKP 284 >gi|115350969|ref|YP_772808.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD] gi|170698423|ref|ZP_02889496.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|172059974|ref|YP_001807626.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6] gi|115280957|gb|ABI86474.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] gi|170136676|gb|EDT04931.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|171992491|gb|ACB63410.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 222 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD + P L ++ + + + G+TD + N RLSL Sbjct: 96 QADALFDFDKATLKPLGKQKLDELASKIQGMNTEVVVATGYTDRI---GSDKYNDRLSLR 152 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339 RA + L+ GV ++I G N N RR+++ V Sbjct: 153 RAQAVKSYLVSKGVPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 209 Query: 340 DRQ 342 Q Sbjct: 210 GTQ 212 >gi|220935396|ref|YP_002514295.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein-like protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996706|gb|ACL73308.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein-like protein [Thioalkalivibrio sp. HL-EbGR7] Length = 181 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S PE V+ G LA + + GHTD N L RA + Sbjct: 76 FEFDRSDIKPEFEEVIIAHGRFLAQNPNMQVRAEGHTDER---GTREYNLGLGERRAQAV 132 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 ++LM G D+I ++ + + + NRR++++ Sbjct: 133 QRMLMLQGARADQI-QVVSYGEEMPVAFGRDEESWAQNRRVELV 175 >gi|172063966|ref|YP_001811617.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6] gi|171996483|gb|ACB67401.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6] Length = 170 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289 +FD P+ ++++IG L + + + G++D + LS Sbjct: 61 SSGPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDE---GTVAYDRELSR 117 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 RA L+ G+ R+ + G + + NRR I+V R Sbjct: 118 RRAEVVAIELVDVGLDGKRV-AVIGKGKSDPVGDNRTPTGRAQNRRAAIVVSPR 170 >gi|163738350|ref|ZP_02145765.1| OmpA/MotB [Phaeobacter gallaeciensis BS107] gi|161388271|gb|EDQ12625.1| OmpA/MotB [Phaeobacter gallaeciensis BS107] Length = 169 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + +F S P VLQ L + + + +I GH D N L R Sbjct: 59 DRVLFAVDQSTLSPAAQSVLQGQARWLTANPDYVVTIEGHADEQ---GTREYNLALGARR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333 A +A + L+ GV+ +R+ ++ F R +++ + NRR Sbjct: 116 ANAAREYLLSQGVAGNRL-QVVSFGKERPLEICSNEACYTKNRR 158 >gi|163742233|ref|ZP_02149621.1| peptidoglycan-associated lipoprotein [Phaeobacter gallaeciensis 2.10] gi|161384563|gb|EDQ08944.1| peptidoglycan-associated lipoprotein [Phaeobacter gallaeciensis 2.10] Length = 169 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + +F S P VLQ L + + + +I GH D N L R Sbjct: 59 DRVLFAVDQSTLSPAAQSVLQGQARWLTANPDYVVTIEGHADEQ---GTREYNLALGARR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333 A +A + L+ GV+ +R+ ++ F R +++ + NRR Sbjct: 116 ANAAREYLLSQGVAGNRL-QVVSFGKERPLEICSNEACYTKNRR 158 >gi|134095585|ref|YP_001100660.1| putative peptidoglycan-associated lipoprotein (pal) [Herminiimonas arsenicoxydans] gi|133739488|emb|CAL62539.1| putative peptidoglycan-associated lipoprotein precursor pal-like [Herminiimonas arsenicoxydans] Length = 167 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + + FD S + PE V+ + L + I +G+TD A N L Sbjct: 62 KRSVYFDYDSYVVKPEYQQVVANHAKYLQSNRTRKIIIQGNTDER---GGAEYNLALGQK 118 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + + L GV E ++ +S + K + + + NRR DI+ Sbjct: 119 RAEAVRKSLSLLGVPESQMEAVS-LGKEKPKALGSDEAAWAENRRADIV 166 >gi|85860625|ref|YP_462827.1| outer membrane protein [Syntrophus aciditrophicus SB] gi|85723716|gb|ABC78659.1| outer membrane protein [Syntrophus aciditrophicus SB] Length = 204 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 66/176 (37%), Gaps = 9/176 (5%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + + + ++ + + + +A+ + + +++ +L ++ Sbjct: 33 PDPDGKVGEITVQNKGGAQIMTQAGQMAEVHDEATAPVSPASVMDDKEIHRIFGDVLAAL 92 Query: 229 IDQR--NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNW 285 ++ F +S ++ VL E ++ E IS+ GHTD N+ Sbjct: 93 PEKPLTFILYFKTNSFELNIPSLKVLNSAHEAISSRQSEDISVIGHTDRV---GTDEKNY 149 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 LS RA S + L+ GV D I ++ + + NRR++++V Sbjct: 150 ILSRKRALSVKKYLVVKGVHPDAI-ELDYHGEANPLVKTAEGVAEPRNRRVEVIVR 204 >gi|254455867|ref|ZP_05069296.1| OmpA family protein [Candidatus Pelagibacter sp. HTCC7211] gi|207082869|gb|EDZ60295.1| OmpA family protein [Candidatus Pelagibacter sp. HTCC7211] Length = 165 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 37/105 (35%), Gaps = 7/105 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + F + SI + L+ L ++ + + GH D N L Sbjct: 58 PDRVFFATNESILTTASRETLRAQAAWLRKNSSINIVLEGHADER---GTREYNLALGER 114 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333 RA SA LM G+S DRI + + R S NRR Sbjct: 115 RANSAKDYLMTYGISSDRI-SVLSYGKERPVDGGSSPLAWSKNRR 158 >gi|197337668|ref|YP_002157566.1| OmpA/MotB domain protein [Vibrio fischeri MJ11] gi|197314920|gb|ACH64369.1| OmpA/MotB domain protein [Vibrio fischeri MJ11] Length = 341 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 8/117 (6%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARD 283 +I+ ++ F +SS ++ LQK+ +L + I G+TD+ Sbjct: 219 IITTNEESYVTYFSFASSKVNTGSLE-LQKVLHILKKYPQSNLILTGNTDSI---GSYAS 274 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 N RLS RA S + G+S RI + ++ N R+D+ + Sbjct: 275 NQRLSQKRANSVARFFTDRGISISRI-TVRADGETNPVASNITAEGRSQNLRVDMNI 330 >gi|126733987|ref|ZP_01749734.1| OmpA family domain protein [Roseobacter sp. CCS2] gi|126716853|gb|EBA13717.1| OmpA family domain protein [Roseobacter sp. CCS2] Length = 312 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 8/124 (6%) Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281 + + + F+ S+ LQ + + LA + + +++ GHTD+ Sbjct: 192 QLEVVGRSVLSDLSFETGSAQLAAGNYASLQALADYLAGAPQLRVALVGHTDS---SGSL 248 Query: 282 RDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 N LS RA S + L+ G S +I G + + NRR++++V Sbjct: 249 EANIALSKRRAASVLERLVSAYGTSRGQIEA-EGMGYLAPIAPNLTEEGREANRRVEVIV 307 Query: 339 EDRQ 342 Q Sbjct: 308 TSTQ 311 >gi|307611849|emb|CBX01563.1| hypothetical protein LPW_32501 [Legionella pneumophila 130b] Length = 294 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S + V L++I + + +VI I GH D S + N +S RA S Sbjct: 190 FGVDSKLLSDADKVQLRRIAQYVDADVQIDVIKIIGHADDSGRKG---YNNAISQYRAES 246 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 L++ GV + ++ I+ + +D +ANRR+ + + + Sbjct: 247 VKNYLIRLGVPQRKL-SITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294 >gi|260890421|ref|ZP_05901684.1| OmpA family protein [Leptotrichia hofstadii F0254] gi|260860041|gb|EEX74541.1| OmpA family protein [Leptotrichia hofstadii F0254] Length = 180 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 10/110 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F L+ I +L + I GHTD++ + N +LSL+RA + Sbjct: 64 FKVDGEKMNESESYDLKYIANMLNTHIEKGSLEIIGHTDST---GSKKHNLKLSLERAIN 120 Query: 295 AYQVLMKSGVSEDRISKIS--GFAHHRLKIASDPMNSA--NRRIDILVED 340 A ++L + G+ R S + G ++ + NRRI+I++ D Sbjct: 121 AAKLLREYGLD-KRFSVVKIIGKGGEEPMDTNETVEGRYNNRRIEIILND 169 >gi|54295802|ref|YP_128217.1| hypothetical protein lpl2892 [Legionella pneumophila str. Lens] gi|53755634|emb|CAH17136.1| hypothetical protein lpl2892 [Legionella pneumophila str. Lens] Length = 294 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S + V L++I + + +VI I GH D S + N +S RA S Sbjct: 190 FGVDSKLLSDADKVQLRRIAQYVDADVQIDVIKIIGHADDSGRKG---YNNAISQYRAES 246 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 L++ GV + ++ I+ + +D +ANRR+ + + + Sbjct: 247 VKNYLIRLGVPQRKL-SITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294 >gi|114562640|ref|YP_750153.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114333933|gb|ABI71315.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400] Length = 178 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 39/106 (36%), Gaps = 7/106 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 ++N FD S E ++Q G L V I GH D N L Sbjct: 72 RQNIIYFDFDRSEVQSENAEIIQAHGNYLVEHPNVRVLIEGHADER---GTPEYNIALGE 128 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 RA + + L GV ++S +S + + +D + NRR Sbjct: 129 RRAKAIAKYLQGMGVQPSQMSIVS-YGEEKPLDYSRNDTGFAKNRR 173 >gi|303249271|ref|ZP_07335504.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ] gi|302489310|gb|EFL49266.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ] Length = 264 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 4/113 (3%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 ++ N+ MF S+ P VL + ++L +++RG D W L Sbjct: 137 MMQVNNSVMFRPGSAELTPTAQKVLDGVAKILRDFKINLTVRGFADDDEKGGPYPSKWEL 196 Query: 288 SLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 S RA +A + L + +G+S R+ + G A + + + NRRI+ Sbjct: 197 SAARAAAATRYLAETTGISTTRLRAV-GLADSQPLVPPTSPANKARNRRIEFF 248 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 42/90 (46%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIE 66 KN + + +II ++ ++ GSWK+ YADF+T LMAFFL++W++ + TK+ + Sbjct: 3 KNSDKGKTVIIYRESEGGHGGHHGGSWKVAYADFVTALMAFFLLLWLVVSLKPKTKQELS 62 Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQN 96 F + + + Sbjct: 63 LVFQDKNVPSKEKVQNLEKVPTFISPDAIK 92 >gi|329755842|gb|AEC04318.1| outer membrane protein A [Pasteurella multocida] gi|329755852|gb|AEC04323.1| outer membrane protein A [Pasteurella multocida] Length = 358 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ + F + P VL I +A Sbjct: 215 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 274 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 275 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 330 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V+ + Sbjct: 331 CDSVKGRKALIACLADDRRVEIPVKGNK 358 >gi|261496238|ref|ZP_05992643.1| heat-modifiable outer membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308069|gb|EEY09367.1| heat-modifiable outer membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] Length = 372 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 249 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 305 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G + ++ + G+ D + +RR++I V Sbjct: 306 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 364 Query: 339 EDRQ 342 + + Sbjct: 365 QGSK 368 >gi|254361457|ref|ZP_04977597.1| outer membrane protein OmpA [Mannheimia haemolytica PHL213] gi|153092967|gb|EDN73993.1| outer membrane protein OmpA [Mannheimia haemolytica PHL213] Length = 230 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 107 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 163 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G + ++ + G+ D + +RR++I V Sbjct: 164 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 222 Query: 339 EDRQ 342 + + Sbjct: 223 QGSK 226 >gi|45758059|gb|AAO85788.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 372 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 249 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 305 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G + ++ + G+ D + +RR++I V Sbjct: 306 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 364 Query: 339 EDRQ 342 + + Sbjct: 365 QGSK 368 >gi|45758055|gb|AAO85786.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 372 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 249 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 305 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G + ++ + G+ D + +RR++I V Sbjct: 306 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 364 Query: 339 EDRQ 342 + + Sbjct: 365 QGSK 368 >gi|45758063|gb|AAO85790.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 367 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 244 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G + ++ + G+ D + +RR++I V Sbjct: 301 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|261491959|ref|ZP_05988536.1| heat-modifiable outer membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|45758053|gb|AAO85785.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] gi|261312426|gb|EEY13552.1| heat-modifiable outer membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 374 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 251 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 307 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G + ++ + G+ D + +RR++I V Sbjct: 308 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 366 Query: 339 EDRQ 342 + + Sbjct: 367 QGSK 370 >gi|45758065|gb|AAO85791.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 367 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 244 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G + ++ + G+ D + +RR++I V Sbjct: 301 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 359 Query: 339 EDRQ 342 + + Sbjct: 360 QGSK 363 >gi|45758061|gb|AAO85789.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 373 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 250 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 306 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G + ++ + G+ D + +RR++I V Sbjct: 307 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 365 Query: 339 EDRQ 342 + + Sbjct: 366 QGSK 369 >gi|45758051|gb|AAO85784.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 378 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 255 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 311 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G + ++ + G+ D + +RR++I V Sbjct: 312 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 370 Query: 339 EDRQ 342 + + Sbjct: 371 QGSK 374 >gi|30314422|gb|AAP15420.1| outer membrane lipoprotein precursor [Burkholderia multivorans] gi|30314432|gb|AAP15425.1| outer membrane lipoprotein precursor [Burkholderia cepacia] Length = 149 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E +LQ+ + L + + I+G+TD + N L RA + Sbjct: 47 FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV++ ++ +S + + + NRR D++ Sbjct: 104 RRALALLGVADSQMEAVS-LGKEKPLATGHDEASWAQNRRADLV 146 >gi|5833214|gb|AAD53408.1|AF133259_1 outer membrane protein PomA [Mannheimia haemolytica] gi|45758045|gb|AAO85781.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] gi|45758049|gb|AAO85783.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 378 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +++ I + G+TD N +LS Sbjct: 255 SDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVNGYTDRI---GKEASNLKLSQ 311 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA---------NRRIDILV 338 RA + ++ G + ++ + G+ D + +RR++I V Sbjct: 312 RRAETVANYIVSKGTNPANVTAV-GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQV 370 Query: 339 EDRQ 342 + + Sbjct: 371 QGSK 374 >gi|307246787|ref|ZP_07528853.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307251124|ref|ZP_07533047.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255770|ref|ZP_07537572.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260222|ref|ZP_07541930.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852258|gb|EFM84497.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856856|gb|EFM88989.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861233|gb|EFM93225.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865669|gb|EFM97549.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 364 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 + +F S P L + + + S I + G+TD N +LS Sbjct: 241 SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRI---GKEASNLKLSQ 297 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338 RA + ++ G ++ + G+ D + +RR+++ V Sbjct: 298 RRAETVANYIVSKGAPAANVTAV-GYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQV 356 Query: 339 EDRQ 342 + + Sbjct: 357 QGTK 360 >gi|218515615|ref|ZP_03512455.1| hypothetical conserved membrane protein [Rhizobium etli 8C-3] Length = 246 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P+ +LQK+ V+ I I GHTDA AR N LS+ RA Sbjct: 145 FAFDSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDA---SGGARYNQNLSMLRAREV 201 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + + + +R+ + G P NRR++ Sbjct: 202 ARFFTEDCHIPPERLEAV-GVGEQFPLDPQKPKADENRRVEF 242 >gi|167845593|ref|ZP_02471101.1| ompA family protein [Burkholderia pseudomallei B7210] Length = 277 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 +F + L + + S + + G+TD N RLS Sbjct: 162 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLVVTGYTDRL---GSDEHNARLSS 218 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 +RA + ++ G+ +I+ + G + + NRR++I ++ + Sbjct: 219 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 277 >gi|332291918|ref|YP_004430527.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332170004|gb|AEE19259.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 306 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 73/274 (26%), Gaps = 12/274 (4%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 P A+ F+ + P + + D + + + G + Sbjct: 38 PAVATPEVATSMAFNLKGPDGKFAFTSNDNFNFNTSSFSILPPISGEVTDGVNQFKTYFE 97 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + + N + +P S + + Sbjct: 98 TAGNEDKMIDITGYYDSGEKNTSAFADLGLARSNSVKNYFVDQGIP--SSRINTYGELRA 155 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTR-TGILISIIDQRNTPMFDKS--SSIPLPE 247 + + + + + T I S+ F+ S + Sbjct: 156 SIVSDGNVYKGPIEYRIFNQANGDLDATNTALQDIENSLRADPLVLYFNYGEASVTLSEK 215 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + + I L I++ GHTD+ N RL L+RA A L +G+ E Sbjct: 216 KRLQIGDISCYLDKKEGATITVEGHTDSQ---GSLTTNDRLGLERAEFAKAYLANNGIPE 272 Query: 307 DRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 +I +S +D NRR I + Sbjct: 273 SKIKTVS-KGERSPIETNDTEEGHNKNRRAVITL 305 >gi|315122875|ref|YP_004063364.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496277|gb|ADR52876.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 152 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 6/110 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + FD +S PE I VL +G L + I GHTD + L L RA Sbjct: 42 DRIFFDINSYSIRPEDIQVLSSLGSWLEKNGCDFIIEGHTDEQ---GTRNSSLVLGLRRA 98 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340 ++ + + G++ R+ I+ + + + S NRR I+++ Sbjct: 99 HTVFDYFLARGINSSRMK-ITSYGKEIPAVLGYDESAYSKNRRTVIVLQK 147 >gi|254786950|ref|YP_003074379.1| OmpA/MotB domain-containing protein [Teredinibacter turnerae T7901] gi|237683752|gb|ACR11016.1| OmpA/MotB domain protein [Teredinibacter turnerae T7901] Length = 311 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 6/79 (7%) Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I H A DN LS RA L+ G+ E ++ + + Sbjct: 215 NQFIIDAHASAE---GTRIDNLELSKTRADLVRDYLVGHGIPESQLV-VRWHGERYPVAS 270 Query: 324 SD--PMNSANRRIDILVED 340 +D + NRR+ + +E Sbjct: 271 NDSSSGRAKNRRVTVRMEK 289 >gi|163800953|ref|ZP_02194853.1| hypothetical protein 1103602000593_AND4_01783 [Vibrio sp. AND4] gi|159175302|gb|EDP60099.1| hypothetical protein AND4_01783 [Vibrio sp. AND4] Length = 252 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 73/224 (32%), Gaps = 8/224 (3%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + L + Q ++ ++L ++ + + N+ L + Sbjct: 20 PDEPLGPEHGLRFDWQLTKLHLDALIQEGARWCFPAAVVQALQKQNRIARELEGGLMLDA 79 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSS 241 + ++R +L ++ + + + I+ +I D N F S Sbjct: 80 ANDIVIQRRRLNLLEQQLDYVLSQTTCKPPQDIEAFRNDLSIVANIYDLLNVDNQFAIDS 139 Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + P+ + L + +L + + GH DA+ N +L+ +RA + L Sbjct: 140 AEINPKYMGHLAEAAYILRDHPYLSLVVTGHADAT---GTPEYNSQLAQNRAEQVKRYLT 196 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 G++ DR+ NRR+ I V Q Sbjct: 197 VFGITSDRVQT-KSVGESLPLYEGQTPGVRLTNRRVSIEVLSGQ 239 >gi|85375617|ref|YP_459679.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594] gi|84788700|gb|ABC64882.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594] Length = 367 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F+ S PE +L A+ + + GH D N LS Sbjct: 256 PYIVFFNWDESNITPEAATILNNAVTAYANCGTASVMLAGHADR---SGPQTYNVGLSQR 312 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 R S + L G+ + RIS F + ++ + NRR++I Sbjct: 313 RNASVREYLNGRGIPDARISS-EAFGESQPRVPTADGVRELQNRRVEIT 360 >gi|198282220|ref|YP_002218541.1| peptidoglycan-associated lipoprotein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667535|ref|YP_002424585.1| peptidoglycan-associated lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198246741|gb|ACH82334.1| peptidoglycan-associated lipoprotein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519748|gb|ACK80334.1| peptidoglycan-associated lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 192 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + + + + + + + G+TD N L RA + Sbjct: 86 FAFNSGAMDAQAQQIAAQNAQFMVAHPHVQVRLEGNTDDR---GTQEYNLALGEQRAETV 142 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK-IASDPM-NSANRRIDIL 337 Q L GVS RIS +S F +D + NRR+D + Sbjct: 143 KQFLQSQGVSAARISTVS-FGKDNPLCTTNDSACWARNRRVDFV 185 >gi|89890263|ref|ZP_01201773.1| putative outer membrane protein [Flavobacteria bacterium BBFL7] gi|89517178|gb|EAS19835.1| putative outer membrane protein [Flavobacteria bacterium BBFL7] Length = 571 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++D + L ++ + + + I I HTD+ N LS +R Sbjct: 458 KNILYDLDKYYIRADAEPELNRLVQFMKDNPGVRIEISSHTDSR---GSNAYNKTLSQNR 514 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 A +A + G+ +R+ I G+ RL S + NRR ++ V Sbjct: 515 ASAARDYIASQGIDANRVVGI-GYGETRLLNRCADGIECSAAEHQINRRTEMKV 567 >gi|283850887|ref|ZP_06368173.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. FW1012B] gi|283573810|gb|EFC21784.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. FW1012B] Length = 171 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS PE +L + +++ ++ + G+ D A N L RA +A Sbjct: 69 FAFDSSNLTPEARQILTRKADIMKQYPQIKVIVEGNCDQR---GTAEYNLALGERRAQAA 125 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 Q L G+ DR+S +S + R + NRR + Sbjct: 126 AQYLSNLGIPADRLSTVS-YGKERPLDPGTGEAAYAKNRRDEF 167 >gi|56475929|ref|YP_157518.1| outer membrane protein [Aromatoleum aromaticum EbN1] gi|56311972|emb|CAI06617.1| Bacterial outer membrane protein [Aromatoleum aromaticum EbN1] Length = 238 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 16/119 (13%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ PE L ++ E + + GHTD N +LS RA + Sbjct: 124 LFDFDKAVLKPEGRSKLDQLAEQAKSVKLEVILAVGHTDRL---GSDVYNQKLSERRANA 180 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILVEDRQ 342 L+ GV +RI G + + +RR+++ V + Sbjct: 181 VKTYLVGKGVEANRIYT-EGKGERQPVTGTTCSDKLGRKALIECLQPDRRVEVEVIGTK 238 >gi|86134634|ref|ZP_01053216.1| OmpA family protein [Polaribacter sp. MED152] gi|85821497|gb|EAQ42644.1| OmpA family protein [Polaribacter sp. MED152] Length = 527 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 66/164 (40%), Gaps = 12/164 (7%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K+ K+++S+ + ++ + + ++ FD + + Sbjct: 363 EVSKENFHQAFKEVASSKENFIEVDLELEPIENNHFITVRDQVMLNIPPIYFDLAKATIK 422 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + LQ + +++ ++I IR H+D+ N RLS RA + ++ G+ Sbjct: 423 KTSEQELQMVVDLMNRYPKIIVQIRAHSDSR---GNDSYNLRLSDRRAKATVNWILDKGI 479 Query: 305 SEDRISKISGFAHHRLKI--AS-----DPMNSANRRIDILVEDR 341 +++RI I GF L ++ + + NRR + ++ + Sbjct: 480 AKNRIFGI-GFGEEDLVNECSNGVQCSEEKHLENRRTEFVILNP 522 >gi|330937557|gb|EGH41498.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B] Length = 221 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 33/108 (30%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L + L V I GH+D N LS RA + Sbjct: 99 FPGGGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 155 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 G+ E +I + ++ + NRR+++ +E Sbjct: 156 VMDYFKAQGIPEQQI-TLRFHGERYPLAPNTNEANRARNRRVNVHLER 202 >gi|224458593|gb|ACN43175.1| major outer membrane protein OmpAI [Aeromonas veronii] Length = 327 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 38/126 (30%), Gaps = 26/126 (20%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289 + +F S PE + L + + + + G+TD N +LS Sbjct: 209 SDVLFAFGKSTLKPEGVAALNTLYQQVVDVQPKDGSAVVVGYTDRI---GSDAYNLKLSE 265 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---------------RRI 334 RA + L+ G+ ++ I G N RR+ Sbjct: 266 ARARTVADFLVGKGLPAGKV-AIEGRGEANPV----TGTQCNSVKGKAQLISCLAPDRRV 320 Query: 335 DILVED 340 ++ V Sbjct: 321 EVRVTG 326 >gi|148361303|ref|YP_001252510.1| hypothetical protein LPC_3277 [Legionella pneumophila str. Corby] gi|148283076|gb|ABQ57164.1| hypothetical protein LPC_3277 [Legionella pneumophila str. Corby] Length = 294 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S + V L++I + + + I I GH D S + N +S RA S Sbjct: 190 FGVDSKLLSDADKVQLRRIAQYVDADVQIDAIKIIGHADDSGRKG---YNNAISQYRAES 246 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 L++ GV + ++ I+ + +D +ANRR+ + + + Sbjct: 247 VKNYLIRLGVPQRKL-SITWVGALQPIARNDTDEGRAANRRVVVTLIKK 294 >gi|148979688|ref|ZP_01815660.1| outer membrane protein, putative [Vibrionales bacterium SWAT-3] gi|145961665|gb|EDK26963.1| outer membrane protein, putative [Vibrionales bacterium SWAT-3] Length = 202 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 10/165 (6%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV--KGVLFETTRTGILISIIDQRN 233 +E+ + +++ DL + L + G +I + R Sbjct: 19 SSQQEEEYIETPEAEQISDLQDDDKDGVVNARDTCPATPPASLVDNEGCGEIIRAEEVRQ 78 Query: 234 -TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F S P + + E L I I+G+ + N LS R Sbjct: 79 LNILFANDSYEVNPIFSDQITTMAEFLETYQSASIEIQGYASKV---GSSEYNLELSKKR 135 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRI 334 A++ L+ +G+ R+ ++ G+ RL+ D ++ NRR+ Sbjct: 136 AHNVEDELLYNGIDSSRV-RVVGYGEDRLESDGDDATSHALNRRV 179 >gi|77920564|ref|YP_358379.1| peptidoglycan-associated lipoprotein [Pelobacter carbinolicus DSM 2380] gi|77546647|gb|ABA90209.1| peptidoglycan-associated lipoprotein [Pelobacter carbinolicus DSM 2380] Length = 190 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 7/141 (4%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + +G + + + F+ PE +L E Sbjct: 50 VEEMGAGETGIGESMIGEESMDDSMSMPQTVASLERIYFNFDRYDLSPEAQAILINNAEY 109 Query: 259 LAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + I G+ D N L RA +A + L GV+ DR+ + + Sbjct: 110 LKANPDQKVRIEGYCDER---GSDEYNLALGERRALAAQKYLESLGVAGDRL-SVISYGE 165 Query: 318 HRLKIA--SDPMNSANRRIDI 336 ++ + NRR + Sbjct: 166 EMPLDPAQNEDAYAMNRRAEF 186 >gi|52843156|ref|YP_096955.1| hypothetical protein lpg2962 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630267|gb|AAU29008.1| sodium-type flagellar protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 299 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S + V L++I + + + I I GH D S + N +S RA S Sbjct: 195 FGVDSKLLSDADKVQLRRIAQYVDADVQIDAIKIIGHADDSGRKG---YNNAISQYRAES 251 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 L++ GV + ++ I+ + +D +ANRR+ + + + Sbjct: 252 VKNYLIRLGVPQRKL-SITWVGALQPIARNDTDEGRAANRRVVVTLIKK 299 >gi|120598160|ref|YP_962734.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1] gi|120558253|gb|ABM24180.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1] Length = 196 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 8/111 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 F+ + + L + L + +V + GHTD N++LSL RA Sbjct: 90 VYFEFAIAEVDLSQWKSLALVKAFLEANNDVALLLVGHTD---IVGTPEFNYQLSLQRAE 146 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + ++L++ G + +R I G + NRR+ +V ++ Sbjct: 147 NVRRILVEDYGFNPNRF-TIVGKGISEPVADNRSSEGRRLNRRVQFIVNNK 196 >gi|15641629|ref|NP_231261.1| outer membrane protein, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591817|ref|ZP_01679004.1| outer membrane protein, putative [Vibrio cholerae 2740-80] gi|121730010|ref|ZP_01682424.1| outer membrane protein, putative [Vibrio cholerae V52] gi|147673877|ref|YP_001217173.1| putative outer membrane protein [Vibrio cholerae O395] gi|153214683|ref|ZP_01949543.1| outer membrane protein, putative [Vibrio cholerae 1587] gi|153802238|ref|ZP_01956824.1| outer membrane protein, putative [Vibrio cholerae MZO-3] gi|153819367|ref|ZP_01972034.1| outer membrane protein, putative [Vibrio cholerae NCTC 8457] gi|153822202|ref|ZP_01974869.1| outer membrane protein, putative [Vibrio cholerae B33] gi|227081775|ref|YP_002810326.1| putative outer membrane protein [Vibrio cholerae M66-2] gi|229508265|ref|ZP_04397770.1| outer membrane protein [Vibrio cholerae BX 330286] gi|229511496|ref|ZP_04400975.1| outer membrane protein [Vibrio cholerae B33] gi|229518635|ref|ZP_04408078.1| outer membrane protein [Vibrio cholerae RC9] gi|229520779|ref|ZP_04410202.1| outer membrane protein [Vibrio cholerae TM 11079-80] gi|229523717|ref|ZP_04413122.1| outer membrane protein [Vibrio cholerae bv. albensis VL426] gi|229529345|ref|ZP_04418735.1| outer membrane protein [Vibrio cholerae 12129(1)] gi|229607839|ref|YP_002878487.1| outer membrane protein [Vibrio cholerae MJ-1236] gi|254226120|ref|ZP_04919717.1| outer membrane protein, putative [Vibrio cholerae V51] gi|254285433|ref|ZP_04960398.1| outer membrane protein, putative [Vibrio cholerae AM-19226] gi|254848742|ref|ZP_05238092.1| outer membrane protein [Vibrio cholerae MO10] gi|255744948|ref|ZP_05418898.1| outer membrane protein [Vibrio cholera CIRS 101] gi|262161767|ref|ZP_06030785.1| outer membrane protein [Vibrio cholerae INDRE 91/1] gi|262169640|ref|ZP_06037331.1| outer membrane protein [Vibrio cholerae RC27] gi|262189703|ref|ZP_06048070.1| outer membrane protein [Vibrio cholerae CT 5369-93] gi|298498295|ref|ZP_07008102.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9656135|gb|AAF94775.1| outer membrane protein, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546319|gb|EAX56596.1| outer membrane protein, putative [Vibrio cholerae 2740-80] gi|121628244|gb|EAX60761.1| outer membrane protein, putative [Vibrio cholerae V52] gi|124115205|gb|EAY34025.1| outer membrane protein, putative [Vibrio cholerae 1587] gi|124122220|gb|EAY40963.1| outer membrane protein, putative [Vibrio cholerae MZO-3] gi|125621355|gb|EAZ49692.1| outer membrane protein, putative [Vibrio cholerae V51] gi|126510081|gb|EAZ72675.1| outer membrane protein, putative [Vibrio cholerae NCTC 8457] gi|126520270|gb|EAZ77493.1| outer membrane protein, putative [Vibrio cholerae B33] gi|146315760|gb|ABQ20299.1| putative outer membrane protein [Vibrio cholerae O395] gi|150424705|gb|EDN16641.1| outer membrane protein, putative [Vibrio cholerae AM-19226] gi|227009663|gb|ACP05875.1| putative outer membrane protein [Vibrio cholerae M66-2] gi|227013531|gb|ACP09741.1| putative outer membrane protein [Vibrio cholerae O395] gi|229333119|gb|EEN98605.1| outer membrane protein [Vibrio cholerae 12129(1)] gi|229337298|gb|EEO02315.1| outer membrane protein [Vibrio cholerae bv. albensis VL426] gi|229342334|gb|EEO07329.1| outer membrane protein [Vibrio cholerae TM 11079-80] gi|229343324|gb|EEO08299.1| outer membrane protein [Vibrio cholerae RC9] gi|229351461|gb|EEO16402.1| outer membrane protein [Vibrio cholerae B33] gi|229355770|gb|EEO20691.1| outer membrane protein [Vibrio cholerae BX 330286] gi|229370494|gb|ACQ60917.1| outer membrane protein [Vibrio cholerae MJ-1236] gi|254844447|gb|EET22861.1| outer membrane protein [Vibrio cholerae MO10] gi|255737419|gb|EET92814.1| outer membrane protein [Vibrio cholera CIRS 101] gi|262021874|gb|EEY40584.1| outer membrane protein [Vibrio cholerae RC27] gi|262028499|gb|EEY47154.1| outer membrane protein [Vibrio cholerae INDRE 91/1] gi|262034416|gb|EEY52789.1| outer membrane protein [Vibrio cholerae CT 5369-93] gi|297542628|gb|EFH78678.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|327484234|gb|AEA78641.1| outer membrane protein, putative [Vibrio cholerae LMA3894-4] Length = 212 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 7/161 (4%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + LQD + L D + + S Q+ +F SS Sbjct: 42 ANQIADLQDDDRDGVINARDLCPDTPKGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIE 101 Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P + ++++ E L I ++G+ A N LS R+ + L++ GV Sbjct: 102 PAFLTQIRQMAEFLQTYPSTSIELQGYASKV---GSAEHNLALSKQRSEAVRDQLLRYGV 158 Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 + +R++ I G+ L++ D ++ NRR+ V +G Sbjct: 159 APERVN-IVGYGDSVLEVEGTDDVSHARNRRVTATVVGYKG 198 >gi|145588969|ref|YP_001155566.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047375|gb|ABP34002.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 163 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 9/106 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ S P+ ++ L I+G+TD A N L R+ Sbjct: 60 FEFDSYSIDPKYASIISAHASYLKSFERQKASIIIQGNTDDR---GTAEYNLALGQRRSE 116 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 + + L+ GVSE ++ +S F + + + + NRR DI+ Sbjct: 117 AVKKALLALGVSESQVEAVS-FGKEKPENPAQTEAAFKENRRADIV 161 >gi|83312092|ref|YP_422356.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Magnetospirillum magneticum AMB-1] gi|82946933|dbj|BAE51797.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Magnetospirillum magneticum AMB-1] Length = 167 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSL 289 + +F + +L + +L ++ + I GH D + N + Sbjct: 57 REMEILFAAGRLDLDAKARQILDDVAGILAREASIPVIIEGHADDT---GTREYNLAIGE 113 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 RA + Q L+ GV +RI IS F R + + NRR+ + +E Sbjct: 114 RRAETVRQYLIGRGVDGERIRAIS-FGKERPRAPGRTKAARAANRRVVVRLE 164 >gi|261211744|ref|ZP_05926031.1| outer membrane protein [Vibrio sp. RC341] gi|260839094|gb|EEX65726.1| outer membrane protein [Vibrio sp. RC341] Length = 212 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 7/168 (4%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + L+D L D + + + Q+ +F Sbjct: 35 DYRATPLADQIADLKDDDNDGVINARDLCPDTPRGSEIDNDGCGTFIKASQMQQLHILFA 94 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 SS P + ++++ E L I ++G+ A N LS R+ + Sbjct: 95 NDSSAIEPAFLTQIRQMAEFLQGYPSTSIELQGYASKV---GRADYNLALSKQRSEAVRD 151 Query: 298 VLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 L++ G+ R++ I G+ L+ D ++ NRR+ V +G Sbjct: 152 QLIRDGIDPSRVN-IVGYGDSVLEAEGEDDISHARNRRVTATVVGYKG 198 >gi|134295071|ref|YP_001118806.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4] gi|134138228|gb|ABO53971.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4] Length = 223 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD + P L ++ + + + G+TD + N RLSL Sbjct: 97 QADALFDFDKATLKPLGKQKLDELASKIEGMNTEVVVATGYTDRI---GSDKYNDRLSLR 153 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339 RA + L+ G+ ++I G N N RR+++ V Sbjct: 154 RAQAVKSYLVSKGIPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 210 Query: 340 DRQ 342 Q Sbjct: 211 GTQ 213 >gi|317151983|ref|YP_004120031.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316942234|gb|ADU61285.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 241 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 10/169 (5%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L ++ + +K+RL+DL L + K + G+ + D+ + Sbjct: 74 ELMEKPWEVLDKKQRLKDLLFPDDVLPDDLSKAELDKNLEILAKPDGVALVFTDKL---L 130 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ +S +L+ + VL + +++ GHTDAS LS DRA + Sbjct: 131 FEPGASRLSLRGEQLLEALTPVLLFTAAPVNVAGHTDASDTGADPY---ALSGDRALAVL 187 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP---MNSANRRIDILVEDRQ 342 L+ +GV DR +S + + +S NRR++IL++ + Sbjct: 188 SFLVDAGV-PDRRFSLSAYGSDVPALDERDRPVASSMNRRVEILLKTAR 235 >gi|254000099|ref|YP_003052162.1| peptidoglycan-associated lipoprotein [Methylovorus sp. SIP3-4] gi|313202058|ref|YP_004040716.1| peptidoglycan-associated lipoprotein [Methylovorus sp. MP688] gi|253986778|gb|ACT51635.1| peptidoglycan-associated lipoprotein [Methylovorus sp. SIP3-4] gi|312441374|gb|ADQ85480.1| peptidoglycan-associated lipoprotein [Methylovorus sp. MP688] Length = 178 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 + + FD PE ++ + L + I +G+TD N L Sbjct: 69 SKRSVYFDFDKDEVKPEYRDLVNAHAKYLVEHPDAKVILQGNTDER---GTREYNLALGQ 125 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + QVL GVS+ +I IS + + + A + NRR DI+ Sbjct: 126 RRAVAVKQVLNLQGVSDKQIETIS-YGEEKPQAAGSDEAAYSKNRRADIV 174 >gi|221369488|ref|YP_002520584.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131] gi|221162540|gb|ACM03511.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131] Length = 453 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 81/234 (34%), Gaps = 13/234 (5%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 + + + +++ + + + + + S + + L L + + + Sbjct: 225 VAAPDAPRRFAMPAWTVGLAALALMAALYTGLSLQLSARAEKLFDLAALVPPVERAALFR 284 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 P + ++ + + +L + A + + I + + Sbjct: 285 PPRETVAPPPEIRVEPVVIELLPAFRARAPAATAAALQG-----REDAQLTILTLQGTDP 339 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPF--RNIARDNWRLSL 289 +F + + P+ ++ + VLA + + + GHTD P N N LS Sbjct: 340 ELFRSARAEVNPDYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGLSE 399 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA + +L++ GV I G A + + NRR++I +E R Sbjct: 400 ARAATLAALLVEGGVPAG-IVTAEGHADTEPVADNATRAGRAQNRRVEIRIEKR 452 >gi|152971453|ref|YP_001336562.1| putative outer membrane lipoprotein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956302|gb|ABR78332.1| iron-regulated membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 127 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 ++ +FDK+ P++ + + LA + + GHTD N LSL R Sbjct: 19 DSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTDNY---GEDSYNEALSLKR 75 Query: 292 AYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A S + V + G ++D + NRR+ +++ Sbjct: 76 ANSVADAWAEGAHVPRSNLVT-RGLGKKYPIASNDTAAGRAENRRVTVVI 124 >gi|308184601|ref|YP_003928734.1| flagellar motor protein MotB [Helicobacter pylori SJM180] gi|308060521|gb|ADO02417.1| flagellar motor protein MotB [Helicobacter pylori SJM180] Length = 257 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 82/207 (39%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLIKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|294140562|ref|YP_003556540.1| peptidoglycan-associated lipoprotein [Shewanella violacea DSS12] gi|293327031|dbj|BAJ01762.1| peptidoglycan-associated lipoprotein [Shewanella violacea DSS12] Length = 178 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 7/141 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S ++G V V +L + + + + + FD S +L+ G L Sbjct: 41 SELVTGGVETGAVTPILTPEEQQRLKYQELRKEHIIYFDFDRSSVSAHFAEILRAHGHYL 100 Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 V I GH D N L RA + + L GV ++S +S + Sbjct: 101 VEHPNVRLMIEGHADER---GTPEYNIALGERRAKAVAKYLQGMGVLPSQMSIVS-YGEE 156 Query: 319 RLKI--ASDPMNSANRRIDIL 337 + +D + NRR ++ Sbjct: 157 KPLDFSRTDDGFAINRRAVLV 177 >gi|237748798|ref|ZP_04579278.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes OXCC13] gi|229380160|gb|EEO30251.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes OXCC13] Length = 169 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + + FD S + + V+Q + L + + +G+TD N L Sbjct: 63 QRSVYFDFDSFVVSSQYEPVVQAHAKYLNSHKDRKVVIQGNTDDR---GGREYNLALGQK 119 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 RA + + + GVS+ +I +S F + K ++ + NRR DI+ Sbjct: 120 RAEAVRKSMNLMGVSDSQIEAVS-FGKEKPKATGNNEAAWAENRRADIV 167 >gi|284036230|ref|YP_003386160.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283815523|gb|ADB37361.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 757 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 Q +D + + L + E+L ++ +R HTD+ N RLS Sbjct: 642 QLKNIYYDLNKFFIRADAAQELDHVLEILKEYPQMQIELRSHTDSR---ATDTYNIRLSE 698 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDRQ 342 RA +A L+ G+S R+ G+ + ++ + NRR + + Q Sbjct: 699 SRARAAMDYLVARGISASRLIA-RGYGESEIINGCIDGVNCTEGEHQQNRRTEFKIVAVQ 757 >gi|254496226|ref|ZP_05109120.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL) [Legionella drancourtii LLAP12] gi|254354531|gb|EET13172.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL) [Legionella drancourtii LLAP12] Length = 175 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S P+ + + E L + + GHTD N L RA + Sbjct: 70 LFSYDDSNLNPKYLPSVNAQAEYLKSHAGARVLVAGHTDER---GSREYNVALGERRANT 126 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 +L +GVS +I +I + R S NRR++ E + Sbjct: 127 VADILRMAGVSRQQI-RIVSYGKERPINLGHDEASHLQNRRVEFTYEATR 175 >gi|89092902|ref|ZP_01165854.1| ompA family protein [Oceanospirillum sp. MED92] gi|89082927|gb|EAR62147.1| ompA family protein [Oceanospirillum sp. MED92] Length = 617 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 80/294 (27%), Gaps = 18/294 (6%) Query: 51 MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110 ++ NA + K P + G +D K + + E+ + Sbjct: 323 LFSGNAVN---WKEFGGQDAPVKVFARDTNSGTWDSFKS---MVLKKHGVKLVENAVRIE 376 Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 +++ K + Y+ S+ + + D Sbjct: 377 SSVELSDQVSKTPGAIGFIGLPYVLRSKALAISDDRNGNPIYPTTFTISTEDYPLVRRLY 436 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISST--LSGLVADNIVKGVLFETTRTGILISI 228 + + + + + +S + I+ Sbjct: 437 IYEPSTIDTDSQAHKFITFVLSEAGQQVVKEAGFISQNIYKTKPMMTASLPQNYLAAIAN 496 Query: 229 IDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 D+ + F + + LQ++ + + + G +D+ N Sbjct: 497 ADRLSLNFRFHSGTFQLDNKAERDLQRVVDFFEKNPGQQAMLIGFSDSI---GDPAANAS 553 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 LSL RA + + L+ G++ I G ++ NRR++I V Sbjct: 554 LSLQRAKAVERALLARGIN---IQTTLGMGEAAPIASNQTRIGRERNRRVEIWV 604 >gi|254297563|ref|ZP_04965016.1| ompA family protein [Burkholderia pseudomallei 406e] gi|157807731|gb|EDO84901.1| ompA family protein [Burkholderia pseudomallei 406e] Length = 254 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 +F + L + + S + + G+TD N RLS Sbjct: 139 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRL---GSDEHNARLSS 195 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 +RA + ++ G+ +I+ + G + + NRR++I ++ + Sbjct: 196 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 254 >gi|126452529|ref|YP_001066330.1| ompA family protein [Burkholderia pseudomallei 1106a] gi|134277725|ref|ZP_01764440.1| ompA family protein [Burkholderia pseudomallei 305] gi|217421747|ref|ZP_03453251.1| ompA family protein [Burkholderia pseudomallei 576] gi|237812370|ref|YP_002896821.1| OmpA family protein [Burkholderia pseudomallei MSHR346] gi|242318072|ref|ZP_04817088.1| ompA family protein [Burkholderia pseudomallei 1106b] gi|254179713|ref|ZP_04886312.1| ompA family protein [Burkholderia pseudomallei 1655] gi|126226171|gb|ABN89711.1| ompA family protein [Burkholderia pseudomallei 1106a] gi|134251375|gb|EBA51454.1| ompA family protein [Burkholderia pseudomallei 305] gi|184210253|gb|EDU07296.1| ompA family protein [Burkholderia pseudomallei 1655] gi|217395489|gb|EEC35507.1| ompA family protein [Burkholderia pseudomallei 576] gi|237502710|gb|ACQ95028.1| OmpA family protein [Burkholderia pseudomallei MSHR346] gi|242141311|gb|EES27713.1| ompA family protein [Burkholderia pseudomallei 1106b] Length = 254 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 +F + L + + S + + G+TD N RLS Sbjct: 139 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLIVTGYTDRL---GSDEHNARLSS 195 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 +RA + ++ G+ +I+ + G + + NRR++I ++ + Sbjct: 196 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 254 >gi|77163684|ref|YP_342209.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707] gi|254435498|ref|ZP_05049005.1| peptidoglycan-associated lipoprotein, putative [Nitrosococcus oceani AFC27] gi|76881998|gb|ABA56679.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707] gi|207088609|gb|EDZ65881.1| peptidoglycan-associated lipoprotein, putative [Nitrosococcus oceani AFC27] Length = 187 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 7/106 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ SS + +++ G LA ++ ++ GHTD N L RA Sbjct: 82 VYFEFDSSEIQQDDRPIVEAHGGYLAKHPDIKVTLEGHTDER---GSREYNLALGERRAN 138 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + +++ G SED++ ++ + R + + NRR++IL Sbjct: 139 AVRSLILLMGASEDQV-EVVSYGEERPAVDGQDEGAWQLNRRVEIL 183 >gi|89071216|ref|ZP_01158402.1| OmpA family protein [Oceanicola granulosus HTCC2516] gi|89043258|gb|EAR49486.1| OmpA family protein [Oceanicola granulosus HTCC2516] Length = 107 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 8/114 (7%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273 + + T +++++ +FD S+ L + L + ++ GHTD Sbjct: 1 MRIDNTGDSLVVTLPQD---ILFDTDSATLSGSLQSDLNALARSLNNYPSTTITVIGHTD 57 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + A N LS RA + L+ SGVS RI+ + G + Sbjct: 58 NT---GEASYNQNLSRRRAQAVTSTLISSGVSAGRINTV-GRGEDAPIATNLTE 107 >gi|294637420|ref|ZP_06715711.1| peptidoglycan-associated lipoprotein [Edwardsiella tarda ATCC 23685] gi|291089413|gb|EFE21974.1| peptidoglycan-associated lipoprotein [Edwardsiella tarda ATCC 23685] Length = 170 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 7/117 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 + + + + N F PE + L L ++ ++ GHTD Sbjct: 57 LQMQELQKNNIVYFGLDKYDVTPEYMQELDAHAAFLRNNPSYKVTVEGHTDER---GTPE 113 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 N L RA + L GVS D+I +S + + + + NRR ++ Sbjct: 114 YNIALGERRANAVKMYLQGKGVSADQIDIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 169 >gi|88857215|ref|ZP_01131858.1| ompA family protein [Pseudoalteromonas tunicata D2] gi|88820412|gb|EAR30224.1| ompA family protein [Pseudoalteromonas tunicata D2] Length = 580 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 31/294 (10%), Positives = 85/294 (28%), Gaps = 16/294 (5%) Query: 53 IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 + Q P + A + + K DLS+ ++ T+ Sbjct: 296 ALANVFAGKINNWAQLGGPDLPIKLFARDVKSGTWDTFKNLVLKKFDLSLAQNATRLESS 355 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN---- 168 ++ + + + + Y+ ++ + T + + D + Sbjct: 356 TELSTLVSQDEAAIGFIGLNYIQYNKALAISEGEGTAAIFPTRFTIGTEDYALARRLYLY 415 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 N + + + + + IS + + + + + Sbjct: 416 TPTNASNQVKEFSQFAISSAGQAIVEKSGLISQNIKVESVYPMAEAPEIYNKYADLGKRL 475 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRL 287 F+ + L ++ E + + + G++D+ N +L Sbjct: 476 SLNFR---FNYGDQDLDNKGKRDLDRLIEFMEENPGRRLVLMGYSDSI---GAKLKNTQL 529 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339 SL+RA + + L G+ + + G ++ NRR+++ + Sbjct: 530 SLNRAKAVEKELQARGIG---VMAVEGLGEALPVANNDNESGRERNRRVEVWLL 580 >gi|329755858|gb|AEC04326.1| outer membrane protein A [Pasteurella multocida] Length = 348 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ F + P VL I +A Sbjct: 205 VTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 264 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 265 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 320 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V+ + Sbjct: 321 CDSVKGRKALIACLADDRRVEIPVKGNK 348 >gi|326405348|ref|YP_004285430.1| hypothetical protein ACMV_32010 [Acidiphilium multivorum AIU301] gi|325052210|dbj|BAJ82548.1| hypothetical protein ACMV_32010 [Acidiphilium multivorum AIU301] Length = 203 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 10/107 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ P+ + L ++G L T + GHTD + A N LS RA Sbjct: 97 FATGSAKLTPQAVTELDRLGRALTDKTLAAYHFRVVGHTDTT---GAASTNLALSQARAA 153 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 + LM + R+ +G L + + P N ANRR+ I+ Sbjct: 154 AVKTYLMSKFDIPATRLQA-TGVGEADLLVPTGPNVANRANRRVQII 199 >gi|226197157|ref|ZP_03792734.1| ompA family protein [Burkholderia pseudomallei Pakistan 9] gi|225930536|gb|EEH26546.1| ompA family protein [Burkholderia pseudomallei Pakistan 9] Length = 254 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 +F + L + + S + + G+TD N RLS Sbjct: 139 LFAFDKGGFEDISADGRRQLGDLVASIKAKIFSINHLIVTGYTDRL---GSDEHNARLSS 195 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 +RA + ++ G+ +I+ + G + + NRR++I ++ + Sbjct: 196 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 254 >gi|31747683|gb|AAO38325.1| Lfe140p2 [Leptospirillum ferrooxidans] Length = 94 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%) Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 N LS RA S +VL+ G++ +R+ +I G NRR++ Sbjct: 22 TGSGEYNDTLSRRRAESVREVLLNDGINPERM-RIRGLGSRYPVATDKTSAGRQANRRVE 80 Query: 336 ILVEDRQG 343 I+V D+ G Sbjct: 81 IIVSDKNG 88 >gi|149191257|ref|ZP_01869513.1| outer membrane protein [Vibrio shilonii AK1] gi|148834927|gb|EDL51908.1| outer membrane protein [Vibrio shilonii AK1] Length = 275 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 78/248 (31%), Gaps = 9/248 (3%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS-QQSEHCKNSLTRDSEKGKDLC 158 S + T + GS L + + +SL + + Sbjct: 23 TSYPDEGTGGIAENYAGSDFSPVMPDEPLGPEHGLRFDWKLAALHLDSLIEEGAQWCFPA 82 Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMK-RKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 ++ N+ L + + ++K+L DL ++ L+ +KG F Sbjct: 83 AVLQAQEKQNRIARELEGGLWIDAANDIVIQRKKLNDLELRLDYVLNEATCAPPLKGKDF 142 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASP 276 + + F +S P+ + L + +L + S+ GH DA+ Sbjct: 143 DDLMQVVKRVYQLLNVDNQFAYNSVEVNPKYMGHLAEAANILKQHPTIRLSVTGHADAT- 201 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 N +++ RA + L G++ RI S D NRR+ Sbjct: 202 --GGTEYNEKIAKGRAQQVKRYLTIFGLAPGRIETHS-LGEELPLYEGDSPGVRLTNRRV 258 Query: 335 DILVEDRQ 342 I V + Sbjct: 259 SIEVIADK 266 >gi|78065624|ref|YP_368393.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383] gi|77966369|gb|ABB07749.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 222 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD + P L ++ + + + G+TD + N RLSL Sbjct: 96 QADALFDFDKATLKPLGKQKLDELASKIEGMNTEVVVATGYTDRI---GSDKYNDRLSLR 152 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339 RA + L+ GV ++I G N N RR+++ V Sbjct: 153 RAQAVKSYLVSKGVPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 209 Query: 340 DRQ 342 Q Sbjct: 210 GTQ 212 >gi|107022117|ref|YP_620444.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116689062|ref|YP_834685.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia HI2424] gi|170732350|ref|YP_001764297.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia MC0-3] gi|206561293|ref|YP_002232058.1| putative ompA family protein [Burkholderia cenocepacia J2315] gi|254245998|ref|ZP_04939319.1| Outer membrane protein, OmpA/MotB family [Burkholderia cenocepacia PC184] gi|105892306|gb|ABF75471.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116647151|gb|ABK07792.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424] gi|124870774|gb|EAY62490.1| Outer membrane protein, OmpA/MotB family [Burkholderia cenocepacia PC184] gi|169815592|gb|ACA90175.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3] gi|198037335|emb|CAR53262.1| putative ompA family protein [Burkholderia cenocepacia J2315] Length = 222 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD + P L ++ + + + G+TD + N RLSL Sbjct: 96 QADALFDFDKATLKPLGKQKLDELASKIEGMNTEVVVATGYTDRI---GSDKYNDRLSLR 152 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339 RA + L+ GV ++I G N N RR+++ V Sbjct: 153 RAQAVKSYLVSKGVPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 209 Query: 340 DRQ 342 Q Sbjct: 210 GTQ 212 >gi|254488141|ref|ZP_05101346.1| peptidoglycan-associated lipoprotein [Roseobacter sp. GAI101] gi|214045010|gb|EEB85648.1| peptidoglycan-associated lipoprotein [Roseobacter sp. GAI101] Length = 171 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + +F+ + S P L L + + I GH D N L R Sbjct: 61 DRVLFEVNQSNLTPAGQATLDGQATWLITNIDYQAIIEGHADEQ---GTREYNVALGARR 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 A +A + L+ GV+ +R+ ++ + R + NRR Sbjct: 118 ANAAREYLISRGVAGNRL-RVVSYGKERPIEVCSAEACYAKNRR 160 >gi|315182421|gb|ADT89334.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218] Length = 316 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 48/149 (32%), Gaps = 10/149 (6%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS---SSIPLPETIVV 251 I S+ + +N I F L + V Sbjct: 171 AEMVIDSSQVEPMMNNSPIEYHIPKDMCAESIE-NMLSGQYAFHFGFDIHYEALDDVFVY 229 Query: 252 LQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + I + S + + GH D + N+ LSL RA + +L++ GV ++I Sbjct: 230 SKVIDCISKDSRIKVLLVGHADNQ---GSNQYNYALSLRRAVTISNILVELGVDPEQIV- 285 Query: 312 ISGFAHHRLKIASD--PMNSANRRIDILV 338 I + NRR+++++ Sbjct: 286 IEARGDSEPIANNAILEQRKKNRRVEMIL 314 >gi|254260999|ref|ZP_04952053.1| ompA family protein [Burkholderia pseudomallei 1710a] gi|254219688|gb|EET09072.1| ompA family protein [Burkholderia pseudomallei 1710a] Length = 254 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 +F + L + + S + + G+TD N RLS Sbjct: 139 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLVVTGYTDRL---GSDEHNARLSS 195 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 +RA + ++ G+ +I+ + G + + NRR++I ++ + Sbjct: 196 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 254 >gi|212634658|ref|YP_002311183.1| OmpA protein [Shewanella piezotolerans WP3] gi|212556142|gb|ACJ28596.1| OmpA [Shewanella piezotolerans WP3] Length = 178 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 7/156 (4%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + + + + V V VL + + + + + FD S Sbjct: 26 SESETDATSSTESSTTGSANNGVETGGVAPVLTPAEQQQLKFQELRKEHIIYFDFDRSSV 85 Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + VL+ G+ L + I GH D N L RA + + L G Sbjct: 86 SQQFAEVLEAHGDYLVEHPNVRVMIEGHADER---GTPEYNIALGERRAKAVAKYLQGMG 142 Query: 304 VSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337 V ++ + + + +D + NRR ++ Sbjct: 143 VQPSQM-SVVSYGEEKPMDLSRTDDGFAKNRRAVLV 177 >gi|254197945|ref|ZP_04904367.1| ompA family protein [Burkholderia pseudomallei S13] gi|169654686|gb|EDS87379.1| ompA family protein [Burkholderia pseudomallei S13] Length = 254 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 236 MFDK---SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 +F + L + + S + + G+TD N RLS Sbjct: 139 LFAFDKGGFEDISADGRRQLGDLVASIKAKILSINHLVVTGYTDRL---GSDEHNARLSS 195 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 +RA + ++ G+ +I+ + G + + NRR++I ++ + Sbjct: 196 ERARTVADYMIAEGIPAAKITAV-GRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIKQK 254 >gi|301156596|emb|CBW16067.1| outer membrane protein A (3a;II*;G;d) [Haemophilus parainfluenzae T3T1] Length = 361 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 16/118 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P+ L I +A +++ G+TD N +LS RA S Sbjct: 248 FAFGKANLKPQAKATLDGIYGEIAQINNANVAVAGYTDRI---GKDAPNVKLSQRRADSV 304 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILVEDRQ 342 L+ GV IS + G S + +RR++I V + Sbjct: 305 ANYLVAKGVPAQSISAV-GHGKANPVTGSTCDAVKGRKALIACLAPDRRVEIAVNGTK 361 >gi|239906031|ref|YP_002952770.1| putative peptidoglycan-associated lipoprotein [Desulfovibrio magneticus RS-1] gi|239795895|dbj|BAH74884.1| putative peptidoglycan-associated lipoprotein [Desulfovibrio magneticus RS-1] Length = 171 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS E L + E+L ++ + G+ D A N L RA +A Sbjct: 69 FALDSSNLSAEARQNLTRKAEILRQYPQIKLIVEGNCDQR---GTAEYNLALGERRAQAA 125 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 Q L+ G+ DR+S +S + R + NRR + Sbjct: 126 AQYLVNLGIGADRLSTVS-YGKERPLDPGTSEAAYAKNRRDEF 167 >gi|145298280|ref|YP_001141121.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851052|gb|ABO89373.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 333 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSL 289 + +F S PE + L + + + + G+TD N +LS Sbjct: 210 SDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRI---GSDAYNLKLSE 266 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILV 338 RA + L+ G+ ++ I G + D + + +RR+++ V Sbjct: 267 ARARTVADFLVGKGLPAGKV-AIEGRGEASPVTGTQCDGIKAKAQLIACLAPDRRVEVRV 325 Query: 339 EDRQ 342 Q Sbjct: 326 TGIQ 329 >gi|261365210|ref|ZP_05978093.1| OmpA family protein [Neisseria mucosa ATCC 25996] gi|288566472|gb|EFC88032.1| OmpA family protein [Neisseria mucosa ATCC 25996] Length = 253 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 5/121 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 G V + V + + + +F PE L + + L Sbjct: 55 DKETQGRVECGDREAVAAVQQAPEYVDETVSLSSKTLFGFDKDNLRPEAQENLDALAQRL 114 Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + + + GHTD F N LS RA L+ GV ++S + G Sbjct: 115 SNENVQTVRVEGHTD---FMGSEEYNQALSERRANVVANYLVGRGVPSSKVSAV-GLGES 170 Query: 319 R 319 + Sbjct: 171 Q 171 >gi|167946599|ref|ZP_02533673.1| OmpA/MotB domain protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 126 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 3/66 (4%) Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 T + NW LS RA S + L G+ + R++ GF D + Sbjct: 9 TGYRSTPSSVPSNWELSSARAVSVVRYLASQGIPQRRLTAA-GFGEFHSIDTGDTPEALS 67 Query: 331 -NRRID 335 NRRI+ Sbjct: 68 HNRRIE 73 >gi|165977295|ref|YP_001652888.1| major outer membrane protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190151211|ref|YP_001969736.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250896|ref|ZP_07337088.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252762|ref|ZP_07338923.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248928|ref|ZP_07530938.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307253541|ref|ZP_07535410.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307257957|ref|ZP_07539710.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307264561|ref|ZP_07546144.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|165877396|gb|ABY70444.1| major outer membrane protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189916342|gb|ACE62594.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648412|gb|EFL78607.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650246|gb|EFL80410.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306854539|gb|EFM86732.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858989|gb|EFM91033.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306863504|gb|EFM95434.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306870090|gb|EFN01851.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 364 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 + +F S P L + + + S I + G+TD N +LS Sbjct: 241 SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRI---GKEASNLKLSQ 297 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338 RA + ++ G ++ + G+ D + +RR+++ V Sbjct: 298 RRAETVANYIVSKGAPAANVTAV-GYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQV 356 Query: 339 EDRQ 342 + + Sbjct: 357 QGTK 360 >gi|220921338|ref|YP_002496639.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219945944|gb|ACL56336.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060] Length = 222 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 8/102 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD +SS P+ + V++ +G LA I GHTD + + N LS RA Sbjct: 111 FDYNSSKIGPKALPVVKSLGAALARPELKGNTFLIVGHTD---GKGKDQINQTLSERRAE 167 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 + Q ++++ GV + + G+ +LK ++P+++ NRR+ Sbjct: 168 AVKQYIVQNYGVPASNLVSV-GYGKSQLKDTANPLSAVNRRV 208 >gi|300776234|ref|ZP_07086093.1| outer membrane protein [Chryseobacterium gleum ATCC 35910] gi|300505367|gb|EFK36506.1| outer membrane protein [Chryseobacterium gleum ATCC 35910] Length = 136 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 12/118 (10%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 ++ + FD +S LP +L + S+ ++ G TD N Sbjct: 18 VVETETKLEGIEFDLNSDRILPSNTPILNNAVNYINSSSGSYNVIGATDTR---GTDAYN 74 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRI 334 +LS RA + L+K+GV ++ I G LK + N ANRR+ Sbjct: 75 QKLSERRANNVKNYLIKNGVQTGKLQAI-GKGEKDLKYPECEPATKCPEWKNRANRRV 131 >gi|117920971|ref|YP_870163.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3] gi|117613303|gb|ABK48757.1| OmpA/MotB domain protein [Shewanella sp. ANA-3] Length = 178 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + + FD S E VL+ G L V I GH D N L Sbjct: 72 KEHIIYFDFDRSEVQTEFAAVLEAHGTYLVEHPSVRVLIEGHADER---GTPEYNIALGE 128 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV ++S +S + + + + NRR ++ Sbjct: 129 RRAKAVAKYLQGMGVQPSQMSIVS-YGEEKPLDFTRTDEGFAKNRRAVLV 177 >gi|329948277|ref|ZP_08295121.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328522801|gb|EGF49909.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 490 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 70/203 (34%), Gaps = 15/203 (7%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 ++ DS ++++E K A+K K++ + A ++ Sbjct: 99 AVDADSVTVLVPQTGFVTVDVVSRDEASRTGIDLKAMETAVKDDKQVTEQAAASPIEINS 158 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-- 263 D + T + I + F S+ LQ + ++ Sbjct: 159 RTVDG---SLGARTGDKDVTIVMASDVT---FASDSADLAAAAEAQLQTVAGQISQYPDG 212 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 ++I GHTD N LS RA + L + G+ + ++G ++ Sbjct: 213 GTLTIVGHTDDVQ---DDAYNQALSEKRANAVKTRLEQLTGLDKWN-PSVAGKGESEPRV 268 Query: 323 A--SDPMNSANRRIDILVEDRQG 343 + +D +ANRR++I + G Sbjct: 269 SGTTDEARAANRRVEITLTPTGG 291 >gi|294142621|ref|YP_003558599.1| OmpA family protein [Shewanella violacea DSS12] gi|293329090|dbj|BAJ03821.1| OmpA family protein [Shewanella violacea DSS12] Length = 200 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 9/112 (8%) Query: 228 IIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 I D+ +F S P ++ I + +I GH + N Sbjct: 67 IHDRSELKILFPNDSYYIDPMYYDQVEVIAVFMNDFPNTNVTIEGHCSKT---GSYEHNL 123 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 LS +RA + +L + ++ DR++ I G+++ R SD + NRR+ Sbjct: 124 ALSQNRANAVTSLLAEHYSIASDRLTAI-GYSYDRPVDESDTDMAHTRNRRV 174 >gi|262375753|ref|ZP_06068985.1| OmpA/MotB [Acinetobacter lwoffii SH145] gi|262309356|gb|EEY90487.1| OmpA/MotB [Acinetobacter lwoffii SH145] Length = 215 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 66/176 (37%), Gaps = 20/176 (11%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID---QRNTPM 236 ++ ++ K+ L+ +S ++ D + V I I D + Sbjct: 32 QKTYAELRHKQELEQGGAAQQKRISEMLTD-LKNSVDETGASNLISFDIADGKITLKENI 90 Query: 237 FDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNI----------A 281 F+ S+ P + + + + + + + GHTD S + Sbjct: 91 FNVGSACITPSAAKTFKSLDQRIVSFLKENPKASVFVEGHTDNSIVKQPVLDFKEKCTVY 150 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 DN+ LS RA A ++++ S +E ++G+ R DP + NRR++I Sbjct: 151 DDNFTLSAARAREARKLIISSLDANEANRVVVAGYGDSRPLNGIDPSDGRNRRVEI 206 >gi|145297815|ref|YP_001140656.1| peptidoglycan-associated lipoprotein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850587|gb|ABO88908.1| peptidoglycan-associated lipoprotein [Aeromonas salmonicida subsp. salmonicida A449] Length = 174 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + N F + +L L V I GH D N L Sbjct: 68 RDNVIYFPFDGYDIQGQYADLLDAHASYLRERPSVKVLIEGHADER---GTPEYNIALGE 124 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV +++S +S + + S + + NRR ++ Sbjct: 125 RRAKAVAKYLQTLGVQAEQLSIVS-YGEEKPLDLSHTEDAFAKNRRAVLV 173 >gi|113970702|ref|YP_734495.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4] gi|114047931|ref|YP_738481.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7] gi|113885386|gb|ABI39438.1| OmpA/MotB domain protein [Shewanella sp. MR-4] gi|113889373|gb|ABI43424.1| OmpA/MotB domain protein [Shewanella sp. MR-7] Length = 178 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + + FD S E VL+ G L V I GH D N L Sbjct: 72 KEHIIYFDFDRSEVQTEFAAVLEAHGTYLVEHPSVRVLIEGHADER---GTPEYNIALGE 128 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV ++S +S + + + + NRR ++ Sbjct: 129 RRAKAVAKYLQGMGVQPSQMSIVS-YGEEKPLDFTRTDEGFAKNRRAVLV 177 >gi|262393713|ref|YP_003285567.1| sodium-type flagellar protein MotY [Vibrio sp. Ex25] gi|1550618|dbj|BAA12313.1| component of sodium-driven polar flagellar motor [Vibrio alginolyticus] gi|262337307|gb|ACY51102.1| sodium-type flagellar protein MotY precursor [Vibrio sp. Ex25] Length = 293 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 10/158 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 + Q ++I LS ++ N + + S D T + +++ + Sbjct: 140 QDWQSRDQRIEVALSSVLFQN-KYNAFSDCISNLLKYSFEDIAFTILHYERQGDQLTKAS 198 Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L +I + + H+ ++ + +TD++ ++ ++ LS RA S G+ E Sbjct: 199 KKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQS---LSERRAESLRDYFQSLGLPE 255 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 DRI ++ G+ R + NRR+ I + Q Sbjct: 256 DRI-QVQGYGKRRPIADNGSPIGKDKNRRVVISLGRTQ 292 >gi|317064019|ref|ZP_07928504.1| autotransporter protease [Fusobacterium ulcerans ATCC 49185] gi|313689695|gb|EFS26530.1| autotransporter protease [Fusobacterium ulcerans ATCC 49185] Length = 805 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 8/104 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S + V++KI E + +++I GHTD+ N +LS RA S Sbjct: 701 FSFDESSLTEDGKKVIRKISEEIDKNSKRGILTIEGHTDSI---GTTEYNQKLSEKRAES 757 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 + ++ + + + G+ R + + NRR+DI Sbjct: 758 VEKEFKEN-LKTEIKYETKGYGKSRPVADNKIAEGRAKNRRVDI 800 >gi|260769571|ref|ZP_05878504.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972] gi|260614909|gb|EEX40095.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972] Length = 316 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 8/153 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + R ++ S + I + + I + Q F E Sbjct: 167 QSRPAEMVIDSSQVEPMMNNSPIEYHIPKDMCAESIENMLSGQYAFH-FGFDIHYEALED 225 Query: 249 IVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + V K+ + + S + + GH D + N+ LSL RA + +L++ GV + Sbjct: 226 VFVYSKVIDCISKDSRIKVLLVGHADNQ---GSNQYNYALSLRRAVTISNILVELGVDPE 282 Query: 308 RISKISGFAHHRLKIASD--PMNSANRRIDILV 338 +I I + NRR+++++ Sbjct: 283 QIV-IEARGDSEPIANNAILEQRKKNRRVEMIL 314 >gi|257469789|ref|ZP_05633881.1| putative autotransporter protein [Fusobacterium ulcerans ATCC 49185] Length = 1198 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 8/104 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S + V++KI E + +++I GHTD+ N +LS RA S Sbjct: 1094 FSFDESSLTEDGKKVIRKISEEIDKNSKRGILTIEGHTDSI---GTTEYNQKLSEKRAES 1150 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 + ++ + + + G+ R + + NRR+DI Sbjct: 1151 VEKEFKEN-LKTEIKYETKGYGKSRPVADNKIAEGRAKNRRVDI 1193 >gi|86147194|ref|ZP_01065510.1| outer membrane protein [Vibrio sp. MED222] gi|85835078|gb|EAQ53220.1| outer membrane protein [Vibrio sp. MED222] Length = 213 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 14/155 (9%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN--------TPMFDKSSSI 243 +Q A + + L+ D + + +L FD Sbjct: 61 MQVNASTANQAIKNLIQDKLTQVSESADCAQYLLSRTKFVEGKLAREVLARVTFDFDDDE 120 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 ++ +L + L H T + G+TD+ + N L L R+ L + G Sbjct: 121 LNQKSRYLLLNLIAKLEHQTPEFIVTGNTDS---KGSDSYNLSLGLQRSNVVVGYLKEQG 177 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 V+ + + +S +++ + NRR+DI Sbjct: 178 VNIEDL-TVSSQGEANPVQSNETESGRHNNRRVDI 211 >gi|300692236|ref|YP_003753231.1| peptidoglycan-associated lipoprotein, protein pal, component of tol-pal system [Ralstonia solanacearum PSI07] gi|299079296|emb|CBJ51968.1| Peptidoglycan-associated lipoprotein, protein pal, component of tol-pal system [Ralstonia solanacearum PSI07] Length = 172 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + + FD S PE +L + L + I+G+TD + N L Sbjct: 67 KRSVYFDFDSYTVKPEYQGLLTQHARYLQSHNQRKVLIQGNTDER---GTSEYNLALGQK 123 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 RA + + L GV + ++ +S + + + + NRR DI Sbjct: 124 RAEAVRRALSSLGVPDSQMEAVS-LGKEKPQATGHDEESWAQNRRSDI 170 >gi|194288903|ref|YP_002004810.1| outer membrane protein, ompa domain [Cupriavidus taiwanensis LMG 19424] gi|193222738|emb|CAQ68741.1| putative outer membrane protein, ompA domain [Cupriavidus taiwanensis LMG 19424] Length = 217 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 15/118 (12%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ PE L + L T + I GHTD+ + N RLS+ RA S Sbjct: 101 LFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSF---GSDKYNDRLSIRRAES 157 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----------NRRIDILVEDRQ 342 L+ GV +R+ G +LK+ NRR+++ V + Sbjct: 158 VKAYLVSKGVEANRVYT-EGKGKRQLKVDPKSCKGNRKSQIACQQPNRRVEVEVVGTR 214 >gi|113866814|ref|YP_725303.1| outer membrane protein or related peptidoglycan-associated (lipo)protein [Ralstonia eutropha H16] gi|113525590|emb|CAJ91935.1| outer membrane protein or related peptidoglycan-associated (lipo)protein [Ralstonia eutropha H16] Length = 217 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 15/118 (12%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD ++ PE L + L T + I GHTD+ + N RLS+ RA S Sbjct: 101 LFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSF---GSDKYNDRLSIRRAES 157 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----------NRRIDILVEDRQ 342 L+ GV +R+ G +LK+ NRR+++ V + Sbjct: 158 VKAYLVSKGVEANRVYT-EGKGKRQLKVDPKSCKGNRKSQIACQQPNRRVEVEVVGTR 214 >gi|19881379|gb|AAM00932.1|AF491824_1 hemagglutinin antigen [Avibacterium paragallinarum] Length = 344 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 ++ + F + PE VL I +A + + G+TD Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDLAGYTDR 269 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330 N +LS RA + L+ GV+++ IS +G+ D + Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDAVKGRKA 325 Query: 331 -------NRRIDILVEDRQ 342 +RR++I V+ + Sbjct: 326 LIACLADDRRVEISVKGNE 344 >gi|77457455|ref|YP_346960.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1] gi|77381458|gb|ABA72971.1| putative outer membrane protein [Pseudomonas fluorescens Pf0-1] Length = 364 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 77/222 (34%), Gaps = 12/222 (5%) Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + ++ S S K + +++ + E + + ++ Sbjct: 63 AESSSPWYWPFGSDDSAAAKPEVKAEAKPEAKPVEVAKAEADKGGKWWWPFGGKEQDTAK 122 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + + + L + E ++++ F+ Sbjct: 123 VVP-MPDPKVTQAWLDDYEPRLRTAIKDSNLQLERRENVLVVT---APVEGSFNPDRPAM 178 Query: 245 L-PETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 L P T+ ++ ++L A + + GH+D + A N +LS +RA + + S Sbjct: 179 LLPVTLGPFTRVAKILEADPKTAVLVLGHSDTT---GAAPANVKLSQERAQAVAAIFRLS 235 Query: 303 GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G+ DR+ + G + A+D + NRR+++LV + Sbjct: 236 GLQRDRLM-LRGMGSEAPRAANDSVEGRALNRRVELLVTPQN 276 >gi|309244383|gb|ADO52196.1| OprL [Pseudomonas sp. AF23] gi|309244387|gb|ADO52198.1| OprL [Pseudomonas sp. AF33] gi|309244389|gb|ADO52199.1| OprL [Pseudomonas sp. AF70] gi|309244391|gb|ADO52200.1| OprL [Pseudomonas sp. AF76] gi|309244393|gb|ADO52201.1| OprL [Pseudomonas sp. BcB122] gi|309244395|gb|ADO52202.1| OprL [Pseudomonas sp. BcB153] Length = 156 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 4/89 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + +++ G+TD N L RA + Sbjct: 66 FEYDSSDLKPEAMRALDVHAKDLKANGNRVTLEGNTDER---GTREYNMALGERRAKAVQ 122 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325 + L+ GVS ++ +S + R + Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGN 150 >gi|126666113|ref|ZP_01737093.1| OmpA/MotB [Marinobacter sp. ELB17] gi|126629435|gb|EBA00053.1| OmpA/MotB [Marinobacter sp. ELB17] Length = 110 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%) Query: 268 IRGHTDASPFR----NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I+GH+D+ ++ NW LS RA SA +VL ++G+ R+ + GFA R + Sbjct: 16 IQGHSDSRSIAPALQSLYPTNWELSASRAASAVRVLREAGIDPSRMQAV-GFADARPLVK 74 Query: 324 S-DP-MNSANRRIDILVEDRQ 342 D NRRI++L+ Q Sbjct: 75 EIDTVSRRKNRRIEVLLYPSQ 95 >gi|78777594|ref|YP_393909.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251] gi|78498134|gb|ABB44674.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251] Length = 176 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 39/117 (33%), Gaps = 8/117 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDN 284 I + T FD + L V S + G+ D N Sbjct: 63 RIEKELKTIYFDFDKFNIKADMQANLSTDASVAKSSASKFQLKLEGNCDEW---GSDEYN 119 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 + L L RA S + L+ GV +RIS +S F + NRR+D + Sbjct: 120 FALGLKRAESVKKALVAEGVDANRISMVS-FGESNPTCTDKTKECWAENRRVDFKLL 175 >gi|288801512|ref|ZP_06406964.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039] gi|288331593|gb|EFC70079.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039] Length = 674 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 34/145 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I+ + +D + PE+ L ++ ++L + I + HTD +R N Sbjct: 498 ITAPVLIDNIFYDFDKATLRPESTTSLDELVKLLNENPNVTIELSAHTD---YRGSEEYN 554 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFA------------HHRLKIASDPM----- 327 +LS RA + L+ G+S +R++ + G+ + D Sbjct: 555 KKLSQKRAEAVVNYLIAHGISSERLTPV-GYGKEKPKKIKKKLTEKYPWLKEDSALTESF 613 Query: 328 ------------NSANRRIDILVED 340 N NRR + +V Sbjct: 614 IQSLDKEKQEICNQLNRRTEFIVLR 638 >gi|257456150|ref|ZP_05621347.1| OmpA family protein [Treponema vincentii ATCC 35580] gi|257446236|gb|EEV21282.1| OmpA family protein [Treponema vincentii ATCC 35580] Length = 1355 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 85/294 (28%), Gaps = 14/294 (4%) Query: 58 DDDTKKAIEQYFNPFGKNLMT----ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + + GK + N + + + Sbjct: 1061 SSEKGDTLASSIQWDGKADSGRVVSGTFIAELSLNYIKGDELVASTAPFISSTKAPELGV 1120 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 K+ E+ +F +++ K E K +K Sbjct: 1121 KLSPKYFSPDNDGNEDELFINLSAKSDTQVKQWSFEIREPEDTGNKLFWSTGGKDKITEQ 1180 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISST-LSGLVADNIVKGVLFETTRTGILI---SII 229 + K ++ L+ +V + VL + I SII Sbjct: 1181 IIWDGRSLKGETVQSATDYPYTFTVTDEIGLTSVVKGYVPIDVLVIRDGDKLKIAVPSII 1240 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR--DNWR 286 ++N FD + I VL +I E+L E + GH + D Sbjct: 1241 FRKNAADFDGLEQNVVDRNIKVLTRIAEILNKFPEYKVQVEGHANNVSGTEREEKEDLIP 1300 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338 LS RA + + L++ GVS R+S + G + + NRR++ ++ Sbjct: 1301 LSAARADAVRRFLIERGVSRSRLSSV-GIGGTKPIASLSDKDNWWKNRRVEFVL 1353 >gi|83312347|ref|YP_422611.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Magnetospirillum magneticum AMB-1] gi|82947188|dbj|BAE52052.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Magnetospirillum magneticum AMB-1] Length = 410 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 86/278 (30%), Gaps = 13/278 (4%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 G + + A + + + + T+ T Q+ Q + Sbjct: 6 RWVGLSAVAALAACAMPADVSDVQTILGSKATTGTPFTQALFQEYQAYTKQQVQTEVEWV 65 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + ++ D + L +T E + + + + Sbjct: 66 DASETARKGLKAGAGEAVLPDELGTRVLPAATVPELTAARARLMGYFQGGATQRVPAAAA 125 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII----DQRNTPM--FDKSSSI 243 K + G A L + + D R + M FD S+ Sbjct: 126 KAQVAFDCWLEQAAEGYAASPCKATFLAHEPILKKAVGVTEVAADVRRSFMVNFDLGSAK 185 Query: 244 PLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ + L++ A +S+ G+TD A N RLS RA + L K Sbjct: 186 LSPQALQTLKEAAAAQAQMYAPLVSVAGYTDTL---GSADANLRLSRQRADAVTAELTKL 242 Query: 303 GVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 GV+ I + L +A+ + + NRR++I + Sbjct: 243 GVNPA-IIAENALGESSLAVATGDNKAEAKNRRVEITL 279 Score = 46.9 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 30/270 (11%), Positives = 63/270 (23%), Gaps = 12/270 (4%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 K ++ + + L+ Q Q Sbjct: 148 KATFLAHEPILKKAVGVTEVAADVRRSFMVNFDLGSAKLSPQALQTLKEAAAAQAQMYAP 207 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + +L ++ + S + K Sbjct: 208 LVSVAGYTDTLGSADANLRLSRQRADAVTAELTKLGVNPAIIAENALGESSLAVATGDNK 267 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 ++ +I+ + F SS I Sbjct: 268 AEAKNRRVEITLAGPTWSHGRYGGYAYGDRGHGWGGGYYGHNGFAVFFLPGSSRLGTADI 327 Query: 250 VVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L+ + + + +++ G TD + A N RLS +RA + + K G S Sbjct: 328 ERLKMVVAAQKNMKPKTVTVVGFTDQT---GSAATNARLSRERAQAVAAEIAKLGGST-- 382 Query: 309 ISKISGF-AHHRLKIASDPMNSANRRIDIL 337 + + + RR++IL Sbjct: 383 -TSVEARPGETW----GSSYDGQARRVEIL 407 >gi|327193535|gb|EGE60427.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512] Length = 246 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P+ +LQK+ V+ I I GHTDA AR N LS+ RA Sbjct: 145 FAFDSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDA---SGGARYNQNLSMLRAREV 201 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + + + +R+ + G P NRR++ Sbjct: 202 ARFFTEDCHIPPERLEAV-GVGEQFPLDPQKPKADENRRVEF 242 >gi|323494548|ref|ZP_08099653.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546] gi|323311275|gb|EGA64434.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546] Length = 204 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 7/113 (6%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 ++ +++ +F S P +Q + E LA I I+G+ Sbjct: 73 IVEEEERQLRILFANDSYEINPIFSDQIQTMAEFLARYKSASIQIQGYASKV---GDPDY 129 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRI 334 N LS RA++ L+ V R+ I G+ RL+ + ++ NRR+ Sbjct: 130 NLELSKKRAHAVEDELLSFEVDPKRV-TIVGYGETRLEAEGDDETSHALNRRV 181 >gi|190895263|ref|YP_001985556.1| hypothetical protein RHECIAT_PC0000936 [Rhizobium etli CIAT 652] gi|190700924|gb|ACE95006.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652] Length = 246 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P+ +LQK+ V+ I I GHTDA AR N LS+ RA Sbjct: 145 FAFDSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDA---SGGARYNQNLSMLRAREV 201 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + + + +R+ + G P NRR++ Sbjct: 202 ARFFTEDCHIPPERLEAV-GVGEQFPLDPQKPKADENRRVEF 242 >gi|332561144|ref|ZP_08415462.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N] gi|332274942|gb|EGJ20258.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N] Length = 453 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 80/234 (34%), Gaps = 13/234 (5%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 + + + +++ + + + + + S + + L L + + Sbjct: 225 VAAPDAPRRFAVPVWTVGLAALALMAALYTGLSLQLSARAEKLFDLAALVPPAERAALFR 284 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 P + ++ + + +L + A + + I + + Sbjct: 285 PPRETVAPPPEIRVEPVVIELLPAFRARAPAATAAALQG-----REDAQLTILTLQGTDP 339 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPF--RNIARDNWRLSL 289 +F + + P+ ++ + VLA + + + GHTD P N N LS Sbjct: 340 ELFRSARAEVNPDYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGLSE 399 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA + +L++ GV I G A + + NRR++I +E R Sbjct: 400 ARAATLAALLVEGGVPAG-IVTAEGHADTEPVADNATRAGRAQNRRVEIRIEKR 452 >gi|332704881|ref|ZP_08424969.1| peptidoglycan-associated lipoprotein [Desulfovibrio africanus str. Walvis Bay] gi|332555030|gb|EGJ52074.1| peptidoglycan-associated lipoprotein [Desulfovibrio africanus str. Walvis Bay] Length = 198 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 10/178 (5%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 K+ + S M D A + ++ + +T + + Sbjct: 24 AKKQVSSTPDQTSAAAQGEMTDGTPTDDEAARRAAEEEAYRRSELQDDQTGQTEQERLQA 83 Query: 227 SIIDQRNT---PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 ++N F S + VLQ+ + L + +I+G D Sbjct: 84 EQQAKQNINELVFFAYDSYELDSKAREVLQRKAQALKLMPDTRVTIKGFCDER---GTEE 140 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 N L RA +++ L+ GV+ +RI+ +S + ++ + NRR + + Sbjct: 141 YNLALGERRARASFDFLVLMGVNPNRINIVS-YGEDNPLDPANSEAAYAKNRRCEFEI 197 >gi|281423524|ref|ZP_06254437.1| OmpA family protein [Prevotella oris F0302] gi|281402344|gb|EFB33175.1| OmpA family protein [Prevotella oris F0302] Length = 683 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 34/145 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I+ + +D + + PE+ L ++ +L + I + H D +R A N Sbjct: 511 ITAPVLIDNIFYDFNKATLRPESTAALDELVTLLNENPHVTIELAAHCD---YRGSAEYN 567 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---------------------- 322 RLS RA + + L+ G++ DR++ + G+ R K Sbjct: 568 LRLSQQRAENVVRYLISKGIATDRLTAV-GYGKQRPKTIRKKLTEKYTWLKEGDQLTPAF 626 Query: 323 -------ASDPMNSANRRIDILVED 340 + N NRR + V Sbjct: 627 IEKLDKEQQETCNQLNRRTEFSVLR 651 >gi|163745826|ref|ZP_02153185.1| peptidoglycan-associated lipoprotein, putative [Oceanibulbus indolifex HEL-45] gi|161380571|gb|EDQ04981.1| peptidoglycan-associated lipoprotein, putative [Oceanibulbus indolifex HEL-45] Length = 178 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + +F S L L +++ ++ GH D N L R Sbjct: 67 DRVLFLVDQSTLTDVGRATLDGQVAWLQTNSDYQAVIEGHADEQ---GTREYNIALGGRR 123 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + + ++ G++ R+ IS + R + + + NRR Sbjct: 124 ANAVREYMISRGIAASRLKTIS-YGKERPIEICSDEACYAKNRR 166 >gi|124004937|ref|ZP_01689780.1| peptidoglycan-associated cytoplasmic membrane protein, putative [Microscilla marina ATCC 23134] gi|123989615|gb|EAY29161.1| peptidoglycan-associated cytoplasmic membrane protein, putative [Microscilla marina ATCC 23134] Length = 693 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 7/111 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 FD S E L+K+ L + + + GH D + N +LS DRA Sbjct: 580 VFFDYKSDNIKKEHEKDLEKLVSYLISNPDANLVLNGHADQT---GTETRNKQLSSDRAR 636 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342 + L+ ++ +R+ + + +L ++ + NRR++ + + Sbjct: 637 KVMEYLIGRDINPNRV-TLKAWGEQKLIDKRDNEKGRARNRRVECEIISSE 686 >gi|323344506|ref|ZP_08084731.1| OmpA family protein [Prevotella oralis ATCC 33269] gi|323094633|gb|EFZ37209.1| OmpA family protein [Prevotella oralis ATCC 33269] Length = 688 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 37/171 (21%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 L + + VL + +ID +D + PE+ L ++ ++L Sbjct: 489 KEELRADKTEESKEYVLQFPLASITAPVLIDN---IFYDFDKATLRPESTKALDELVKLL 545 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I + H D ++ N RLS RA + L+ G+++DR++ + G+ Sbjct: 546 NENPNVTIELSAHCD---YKGSDEYNKRLSQQRANAVVAYLIDKGIAKDRLTPV-GYGKE 601 Query: 319 RLKI---------------ASDPMN--------------SANRRIDILVED 340 + K NRR + +V Sbjct: 602 KPKTIRKKLTEKYDWMKEGDVLTEAYIKKLDDKKQELCNQLNRRTEFIVLR 652 >gi|19881371|gb|AAM00928.1|AF491820_1 hemagglutinin antigen [Avibacterium paragallinarum] gi|19881381|gb|AAM00933.1|AF491825_1 hemagglutinin antigen [Avibacterium paragallinarum] gi|19881383|gb|AAM00934.1|AF491826_1 hemagglutinin antigen [Avibacterium paragallinarum] gi|38385761|gb|AAR19399.1| hemagglutinin antigen [Avibacterium paragallinarum] gi|89147814|gb|ABD62756.1| hemagglutinin antigen [Avibacterium paragallinarum] Length = 344 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 ++ + F + PE VL I +A + + G+TD Sbjct: 210 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDLAGYTDR 269 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330 N +LS RA + L+ GV+++ IS +G+ D + Sbjct: 270 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDAVKGRKA 325 Query: 331 -------NRRIDILVEDRQ 342 +RR++I V+ + Sbjct: 326 LIACLADDRRVEISVKGNE 344 >gi|294670740|ref|ZP_06735604.1| hypothetical protein NEIELOOT_02451 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307548|gb|EFE48791.1| hypothetical protein NEIELOOT_02451 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 278 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 48/153 (31%), Gaps = 23/153 (15%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI---PLPETIVVLQKIG 256 + + + ++ + I++S +F + L + Sbjct: 126 ENAVCPPAQEQPAPAMMAQPQMQRIVLS-----ADALFAFDKGDLAHMNAQGKAELDDVA 180 Query: 257 EVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 L + + I GHTD + N RLS RA + L+ GV + + G Sbjct: 181 AKLGRLERLDQVRIIGHTD---YLGSDSYNMRLSQQRAETVRNYLISRGVPAN-VLYAYG 236 Query: 315 FAHHRLK--IASDPMNSA-------NRRIDILV 338 + + + NRR+++ V Sbjct: 237 AGETQPVKQCDNRGNRAELIACLQPNRRVELEV 269 >gi|73667180|ref|YP_303196.1| OmpA/MotB domain-containing protein [Ehrlichia canis str. Jake] gi|72394321|gb|AAZ68598.1| OmpA/MotB domain [Ehrlichia canis str. Jake] Length = 162 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 12/117 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 FD + +L+K+ + T + GHTD N L R Sbjct: 42 EKIYFDFGKATIGDSDKAILEKVIQKAQKDTNTNIVIVGHTDTR---GTDEYNLELGEQR 98 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMN-----SANRRIDILVED 340 A + +++ S + + +S+P + NRR+ I + D Sbjct: 99 ANAVKDFIIEHDKSLENRITVQSKGKSEPAVLVYSSNPEEAEHAHAKNRRVVITLTD 155 >gi|86144088|ref|ZP_01062426.1| OmpA family protein [Leeuwenhoekiella blandensis MED217] gi|85829548|gb|EAQ48012.1| OmpA family protein [Leeuwenhoekiella blandensis MED217] Length = 638 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 91/293 (31%), Gaps = 24/293 (8%) Query: 68 YFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL 127 YF+ G+ + + + S + T + Sbjct: 349 YFSTDGRAGLGGLDVYVYDFESETLENVGAPVNSTKDDFTFIINSDTGKGFFASNRANDP 408 Query: 128 ENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 ++ Y E D E + L + ++++ + + E + Sbjct: 409 LDDDIYSFIKAACESTLIVKVVDKETKEPLNGALVGIRNLDNDLIASGSAEAPEATYTFQ 468 Query: 188 RKK-------RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI----SIIDQRNTPM 236 + R + L + +++ V+ E I + N Sbjct: 469 DPECGEEYFARAEMEGYMTDEKLVEIPSESSEVTVILELEPAVTAIPPSFDLGKLINPIY 528 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S P+ V L KI E+L E I +R HTD+ N LS R S Sbjct: 529 FDFDKSNIRPDAAVELAKIIEILKEYPELHIDVRSHTDSR---GNDAYNLALSERRNQST 585 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 ++ + G++ +R+ G+ +L + + NRR + +V+D Sbjct: 586 IDYIVEEGGIARERL-SGRGYGETQLLNECSNGVDCTKEQHQLNRRSEFIVQD 637 >gi|325267033|ref|ZP_08133703.1| OmpA family protein [Kingella denitrificans ATCC 33394] gi|324981533|gb|EGC17175.1| OmpA family protein [Kingella denitrificans ATCC 33394] Length = 240 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 8/114 (7%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARD 283 + + +F PE I L ++ L + + + GHTD F + Sbjct: 99 RTETVSLNSNFLFGFDKDTLRPEAIETLNQLAARLGDSNVQSARVEGHTD---FMGSEQY 155 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRI 334 N LS RA L++ GV +IS G + ++ + N RR+ Sbjct: 156 NQALSERRATRVANYLVERGVPASKISAA-GLGESQARMTASCQAEVNKLGRRV 208 >gi|24374288|ref|NP_718331.1| peptidoglycan-associated lipoprotein [Shewanella oneidensis MR-1] gi|24348826|gb|AAN55775.1|AE015714_2 peptidoglycan-associated lipoprotein [Shewanella oneidensis MR-1] Length = 177 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + + FD S E VL+ G L V I GH D N L Sbjct: 71 KEHIIYFDFDRSEVQTEYAAVLEAHGTYLVEHPSVRVLIEGHADER---GTPEYNIALGE 127 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV ++S +S + + + + NRR ++ Sbjct: 128 RRAKAVAKYLQGMGVQPSQMSIVS-YGEEKPLDFTRTDEGFAKNRRAVLV 176 >gi|291567193|dbj|BAI89465.1| OmpA/MotB domain protein [Arthrospira platensis NIES-39] Length = 285 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 77/240 (32%), Gaps = 7/240 (2%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 T + + L + +YQ + + + + + Sbjct: 50 PNTSSEMPLTEQLLRRSPEYQPSFPASETPLTPTPTPPPTGLTPEVQQTLQPQLQQLQQD 109 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + L A ++RLQ + +++ + S A+NI Sbjct: 110 LNALIGRTAALEIQIGNSRPAETLERRLQIIEQQL-TAPSSPEAENIPPPTPRTARSRSG 168 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 I+ + +F+ SS P V+L + L + V+ + GHTD + Sbjct: 169 NGLIMTLPSDILFNPGSSTLRPGANVILDNLIPDLQNYRGAVVRVAGHTDD---SGSRQQ 225 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 N LS +A + Q L + + G+ R + + D NRRI++ + Sbjct: 226 NLVLSSAQAEAIVQYLSNAVDDQAYHWVAIGYGMTRPALENTSDINRQLNRRIEVAITPP 285 >gi|237859129|gb|ACR23740.1| outer membrane lipoprotein p6 [Avibacterium paragallinarum] gi|237859131|gb|ACR23741.1| outer membrane lipoprotein p6 [Avibacterium paragallinarum] Length = 150 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWR 286 + + NT F E +L L A + + G+TD N Sbjct: 41 LQQRYNTVYFGFDKYNIEGEYQQILDAHAAYLTATPASKVLVEGNTDER---GTPEYNIA 97 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 L RA + L GV ++S +S + + + NRR Sbjct: 98 LGQRRADAVANYLSAKGVQATQLSTVS-YGEEKPAELGHTEAAYAKNRR 145 >gi|154174442|ref|YP_001408069.1| putative chemotaxis protein MotB [Campylobacter curvus 525.92] gi|112802901|gb|EAU00245.1| putative chemotaxis protein MotB [Campylobacter curvus 525.92] Length = 366 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 112/332 (33%), Gaps = 32/332 (9%) Query: 33 WKIVYADFMTVLMAFFLVM-------WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 W + YAD M L+ F+++ ++++ K+ K+ + + Sbjct: 14 W-VSYADLMAGLLFVFMLLIGAIVVKYVLSQNTLADKEQAIILALANLKDEQGKNFTLDQ 72 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 + + D +++ + + ++I + QK + EN S + + + Sbjct: 73 LNSALKNELAKISDENLNLKRSNDIFVIQIDALKQKLKQLIEENADANASIADLNASILS 132 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + DL + N L ++ ++ R +L + ++ T + Sbjct: 133 LNQKMIVLNDDLAARDSALEEANASNEKNLAKIAFLLEQVSAKEARYDELLRDLNVTKNR 192 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTP--------MFDKSSSIP----------LPE 247 + ++ + + + SI N+ +FDK + E Sbjct: 193 IKNLTGIRVKVISELKDKLGGSIAIDPNSGALKLSSSVLFDKGKAELKEEVKEELKATLE 252 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE- 306 + ++ + + I I G TD+ N LS RAY+ + Sbjct: 253 KYFDVLLNDPQISKNIDQIMIEGFTDSD---GSYLYNLELSQRRAYAVMDFINSYNKDAR 309 Query: 307 -DRISKISGFAHHRLKI-ASDPMNSANRRIDI 336 ++ SG +++ L + A+RRI+I Sbjct: 310 LQKLLVASGRSYNELIMRDGAEDKDASRRIEI 341 >gi|269964049|ref|ZP_06178354.1| outer membrane protein, putative [Vibrio harveyi 1DA3] gi|269831190|gb|EEZ85344.1| outer membrane protein, putative [Vibrio harveyi 1DA3] Length = 206 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 5/112 (4%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F S P ++++ E L SI H AS N LS RA Sbjct: 81 RVLFANDSDEINPVFHRQIRQLSEFLNEYPS-TSIELHGYASKVGGST-HNLDLSKRRAN 138 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343 + L+ G++ +R+ +I G+ L + ++ NRR+ V +G Sbjct: 139 NVRSALLGYGIAANRV-RIVGYGDTHLAQQGTDEVSHALNRRVTASVVGYKG 189 >gi|187735188|ref|YP_001877300.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187425240|gb|ACD04519.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 439 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 14/114 (12%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F + + LQ + E + S + + I GHTD R N LS RA + Sbjct: 329 FFGFNEDTLSKRSERQLQIVAEAIKMDSGKKLEISGHTDDV---GSERYNQGLSERRAAA 385 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK------IASDP---MNSANRRIDILVE 339 L++ GV +RI GF + + + NRR ++ ++ Sbjct: 386 VKAQLVQFGVPAERIVT-KGFGKSQPRRTYSPTADEETRDEARKENRRAEMYLD 438 >gi|71733989|ref|YP_273664.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554542|gb|AAZ33753.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 418 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 A+ + + + E + + + V + Sbjct: 51 AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGAAAKAPAPSLAPAPVAKAAAAPAAPAA 110 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 ++ S+ K D K + + + + + K+ Sbjct: 111 GAENSAPWYWPFGSKDKAQAKPDSVADKTADKPAAPALVAKSETDSKWWWPFGSEGKKDE 170 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + L A E + I+ F+ Sbjct: 171 PKALPMPDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 227 Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 L P T+ + ++ +V+ + I GH D N ++S +RA S + Sbjct: 228 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 284 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 SG+ +R+S+ G + A+D + NRR++IL Sbjct: 285 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 321 >gi|269965970|ref|ZP_06180062.1| sodium-type flagellar protein MotY [Vibrio alginolyticus 40B] gi|269829366|gb|EEZ83608.1| sodium-type flagellar protein MotY [Vibrio alginolyticus 40B] Length = 293 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 10/158 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 + Q ++I LS ++ N + + S D T + +++ + Sbjct: 140 QDWQSRDQRIEVALSSVLFQN-KYNAFSDCISNLLKYSFEDIAFTILHYERQGDQLTKAS 198 Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L +I + + H+ ++ + +TD++ ++ ++ LS RA S G+ E Sbjct: 199 KKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQS---LSERRAESLRDYFQSLGLPE 255 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 DRI ++ G+ R + NRR+ I + Q Sbjct: 256 DRI-QVQGYGKRRPIADNGSPIGKDKNRRVVISLGRTQ 292 >gi|221209446|ref|ZP_03582427.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] gi|221170134|gb|EEE02600.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1] Length = 159 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD P+ ++++IG L + + + + G+TD + LS R Sbjct: 52 GPILFDFDRYNLKPDVRRIVERIGRTLHSAGIDGVRVYGYTDDE---GADGYDLELSRRR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A L+ G+ RI I G H + + NRR I+V R Sbjct: 109 AEVVAIELVDVGLDARRI-AIVGRGKHDPVGDNRMPVGRAQNRRAAIVVSPR 159 >gi|313886427|ref|ZP_07820146.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I] gi|312924108|gb|EFR34898.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I] Length = 647 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 34/139 (24%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288 +Q + +D + PE L + +L + EV + +TD + N +LS Sbjct: 511 EQIHDIYYDFDRASLRPEGKKSLDYLITLLEQNPEVRLELSSNTDR---KGSQAYNQKLS 567 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA------------------ 330 RA S L+ G++ DR+ G+ R + + M + Sbjct: 568 QRRAQSVVDYLIAKGIAADRLEA-RGYGKERPYVVTKGMAARFDWLPEGQELTAEWVDTL 626 Query: 331 -----------NRRIDILV 338 NRR + V Sbjct: 627 TEEQQIVCDQLNRRTEFTV 645 >gi|167623623|ref|YP_001673917.1| peptidoglycan-associated lipoprotein [Shewanella halifaxensis HAW-EB4] gi|167353645|gb|ABZ76258.1| Peptidoglycan-associated lipoprotein [Shewanella halifaxensis HAW-EB4] Length = 179 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 48/156 (30%), Gaps = 7/156 (4%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + + S + V V VL + + + + + FD S Sbjct: 27 ESETDATSSTESSSSSEYANNGVETGGVAPVLTPEEQQRLKYQELRKEHIIYFDFDRSSV 86 Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + VL G+ L + I GH D N L RA + + L G Sbjct: 87 SQQFAEVLSAHGDYLVEHPNVRVMIEGHADER---GTPEYNIALGERRAKAVAKYLQGMG 143 Query: 304 VSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 V ++ + + + + + NRR ++ Sbjct: 144 VQPSQM-SVVSYGEEKPMDFTRSDEGFAKNRRAVLV 178 >gi|19881367|gb|AAM00926.1|AF491818_1 hemagglutinin antigen [Avibacterium paragallinarum] gi|19881373|gb|AAM00929.1|AF491821_1 hemagglutinin antigen [Avibacterium paragallinarum] gi|19881385|gb|AAM00935.1|AF491827_1 hemagglutinin antigen [Avibacterium paragallinarum] Length = 341 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 ++ + F + PE VL I +A + + G+TD Sbjct: 207 SAPVVEPKVVAKTFALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDLAGYTDR 266 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-- 330 N +LS RA + L+ GV+++ IS +G+ D + Sbjct: 267 I---GSEAANLKLSQRRADTVANYLVSKGVAQEVISS-TGYGEANPVTGAKCDAVKGRKA 322 Query: 331 -------NRRIDILVEDRQ 342 +RR++I V+ + Sbjct: 323 LIACLADDRRVEISVKGNE 341 >gi|532658|gb|AAA99311.1| antigen [Treponema pallidum] Length = 416 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 10/143 (6%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L + D + T G+ ISI FD S+ P L+KI E+L Sbjct: 281 ELQETLKDLHMPDAKVRETEEGVTISI----ENVQFDADSASLAPSEYEKLRKIAELLRA 336 Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + + GH + +D R+S +RA + L + GV + G + Sbjct: 337 FPDRELLVSGHAERR---GSVQDQQRISEERADVVARYLQELGVVDAAHVYTRGCGAQQS 393 Query: 321 KIASDPMNSA--NRRIDILVEDR 341 +D + NRR++I + + Sbjct: 394 IAPNDSEDGRRKNRRVEITIISK 416 >gi|126463889|ref|YP_001045002.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126105700|gb|ABN78230.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 453 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 80/234 (34%), Gaps = 13/234 (5%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 + + + +++ + + + + + S + + L L + + Sbjct: 225 VAAPDAPRRFAVPVWTVGLAALALMAALYTGLSLQLSARAEKLFDLAALVPPAERAALFR 284 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 P + ++ + + +L + A + + I + + Sbjct: 285 PPRETVAPPPEIRVEPVVIELLPAFRARAPAATAAALQG-----REDAQLTILTLQGTDP 339 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPF--RNIARDNWRLSL 289 +F + + P+ ++ + VLA + + + GHTD P N N LS Sbjct: 340 ELFRSARAEVNPDYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGLSE 399 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 RA + +L++ GV I G A + + NRR++I +E R Sbjct: 400 ARAATLAALLVEGGVPAG-IVTAEGHADTEPVADNATRAGRAQNRRVEIRIEKR 452 >gi|291617209|ref|YP_003519951.1| YiaD [Pantoea ananatis LMG 20103] gi|291152239|gb|ADD76823.1| YiaD [Pantoea ananatis LMG 20103] Length = 405 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 58/152 (38%), Gaps = 14/152 (9%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + L DL ++++ ++ + V + ++I +F + ++ P Sbjct: 251 QALLDLRQRLNDVIAAGQLE-----VSDGAFGSKVII-----PADKLFAEQGTVINPVGR 300 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L ++ + I + TD P ++ S RA S Q+L +++ Sbjct: 301 AILARVSSAMKDVKGTILVSVFTDDKPVDGSRFASSYEFSFARARSVSQLLQVQ-LADTH 359 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + + G + +D + NRR++I + Sbjct: 360 VIRSEGRGDSDPLLPNDSSENRTRNRRVEITL 391 >gi|268679844|ref|YP_003304275.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268617875|gb|ACZ12240.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 385 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 101/356 (28%), Gaps = 57/356 (16%) Query: 33 WKIVYADFMTVLMAFFLVM---------WIINAT-------DDDTKKAIEQYFNPFGKNL 76 W + YAD M L+ F+++ + + D K + K Sbjct: 14 W-VSYADLMAGLLFVFILLIGAIIIKYVYAQSDLSAIKTDLDAQKKALVMSEEELAQKKR 72 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 A + + + + E ++K D+ + + L L Sbjct: 73 DVARISDKLIASEQKTLELTTLQARLQEELSKLKSDVILSEESLLAARALLAEKGKALEE 132 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + ++ ++ E + + + + L Sbjct: 133 NDAKLELSAKEIESLKRLLLEVENERDESKGALMVTQNELSNTSNTLKLKQGELALLSQK 192 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ--------------------RNTPM 236 +ST + +++ + TGI I ++ + + + Sbjct: 193 LLDTSTAHQRLVEDLNITKVRIKNLTGIRIKVVQELKSKLGQKINIDPNSGAIRLPSGIL 252 Query: 237 FDKSSSIPLPETIVVLQKIGEV----------LAHSTEVISIRGHTDASPFRNIARDNWR 286 FD S PE L++ + + + + I I GHTD+ +N Sbjct: 253 FDVGSYELKPEAKKQLKETLQPYLEVLLNDADIRDNIDHIMIEGHTDSD---GSYMNNLD 309 Query: 287 LSLDRAYSAYQVL----MKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RRIDI 336 LS RAY+ + R G ++ + + N RRI+I Sbjct: 310 LSQKRAYAVMAFIYSWDESKNALLQRYISAIGRSYSDRIFKNG-LEDKNASRRIEI 364 >gi|163751264|ref|ZP_02158492.1| sodium-type flagellar protein MotY [Shewanella benthica KT99] gi|161328978|gb|EDQ00052.1| sodium-type flagellar protein MotY [Shewanella benthica KT99] Length = 277 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 ++ S + + K+ E LA E++ I +TD+ N R+S RA S Sbjct: 172 YESGGSELTRFSKSQIAKVQEYLAYDSEIELVLIDAYTDSY---GGRSINQRVSEQRADS 228 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + +G+++DRI + G R ++ NRR+ I + Sbjct: 229 VKNFFLSAGINQDRIHTV-GHGERRHVASNASIDERGRNRRVVIRISKP 276 >gi|284048599|ref|YP_003398938.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731] gi|283952820|gb|ADB47623.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731] Length = 235 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 29/162 (17%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L + D +G+ ++ I + +F+ + + + K+ + L Sbjct: 58 NQLLKDVGKDLQAQGLQVRIDTKQGVLRIPES---VLFESGEANIKEQGQAAVGKLSQSL 114 Query: 260 ---------AHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSE--- 306 + E + I GHTD P N NW LS RA + + LM++ V E Sbjct: 115 LKTMTRPEYREALETVFIEGHTDNVPIHNEFFQSNWELSTQRAINTWN-LMRNDVPEFNW 173 Query: 307 ------DRISKISGFAHHRLKIAS------DPMNSANRRIDI 336 + I SG+A R + + +ANRRIDI Sbjct: 174 LVNPRGEPIFSCSGYAETRPVRENGLDPNSEEGRAANRRIDI 215 >gi|332524606|ref|ZP_08400809.1| OmpA family domain protein [Rubrivivax benzoatilyticus JA2] gi|332107918|gb|EGJ09142.1| OmpA family domain protein [Rubrivivax benzoatilyticus JA2] Length = 240 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ I L + L + + GHTD N LS +RA + Sbjct: 138 FEPGSARLTDAGIERLDGLLAALNRAPARRFEVVGHTDD---AGPRDLNLALSRERAEAV 194 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 L+ GV+ RI ++ G + + NRRI++ Sbjct: 195 RAHLVARGVAAARI-EVRGAGPDEPAADNGTAAGRARNRRIEL 236 >gi|16127459|ref|NP_422023.1| OmpA family protein [Caulobacter crescentus CB15] gi|221236272|ref|YP_002518709.1| peptidoglycan-associated lipoprotein pal [Caulobacter crescentus NA1000] gi|13424913|gb|AAK25191.1| OmpA family protein [Caulobacter crescentus CB15] gi|220965445|gb|ACL96801.1| peptidoglycan-associated lipoprotein pal [Caulobacter crescentus NA1000] Length = 188 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 38/112 (33%), Gaps = 7/112 (6%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 + +++ + FD + + VL + L + I I G+ D Sbjct: 70 VQDFVVNIGDRVYFDTDEYVIRADAQPVLAGQAQWLNRYSSVRIRIEGNADER---GTRE 126 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANR 332 N L RA + L+ GVS RI IS F R + NR Sbjct: 127 YNLALGARRANAVRDFLIAQGVSSARIETIS-FGKERPIDPGSSEEAWAKNR 177 >gi|115359182|ref|YP_776320.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD] gi|115284470|gb|ABI89986.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 170 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSL 289 +FD P+ ++++IG L + + + G++D + LS Sbjct: 61 SSGPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDE---GTVAYDRELSR 117 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 RA L+ G+ R+ + G + + NRR I+V R Sbjct: 118 RRAEVVAIELVDVGLDGKRV-AVIGKGKSDPVGDNRTPTGRAQNRRAAIVVSPR 170 >gi|317402072|gb|EFV82666.1| hypothetical protein HMPREF0005_00359 [Achromobacter xylosoxidans C54] Length = 495 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 49/134 (36%), Gaps = 26/134 (19%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH------------------STEV 265 + +SIID+ F S+I P+ + + + + Sbjct: 96 LSVSIIDKGEQ--FAPGSAILTPQAAKAMADLADTYRDVAAASASAKDRDAVNARNNAMR 153 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 I + GHTD + ++ N LS RA + ++ + G D+I G + Sbjct: 154 ILLVGHTDDT---GSSQLNADLSEARARAVAKIFVSRGFRADQIF-YQGAGETLPIADNH 209 Query: 326 PM--NSANRRIDIL 337 + NRR++++ Sbjct: 210 SAAGRARNRRVEVV 223 >gi|260767963|ref|ZP_05876897.1| putative sodium-type flagellar protein MotY precursor [Vibrio furnissii CIP 102972] gi|260615993|gb|EEX41178.1| putative sodium-type flagellar protein MotY precursor [Vibrio furnissii CIP 102972] Length = 227 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 9/121 (7%) Query: 226 ISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIAR 282 I+ + R+T + F L+ + +A + I GHTD Sbjct: 93 ITFTEARDTSLYFASGQQSLSAAQQRTLRDLISYVARDKRVTHLLIDGHTDNV---GSRL 149 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 N +S RA VL GV+ D+I +I ++ + NRR+ I + Sbjct: 150 ANLSVSRSRAEQVAAVLETLGVAADKI-QIRAHGSRYPVASNATESGRAQNRRVVIRLVR 208 Query: 341 R 341 Sbjct: 209 D 209 >gi|84501388|ref|ZP_00999593.1| OmpA/MotB domain protein [Oceanicola batsensis HTCC2597] gi|84390679|gb|EAQ03167.1| OmpA/MotB domain protein [Oceanicola batsensis HTCC2597] Length = 192 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 64/171 (37%), Gaps = 14/171 (8%) Query: 176 PPLSKEKILAMKRKKRLQDLAKK-------ISSTLSGLVADNIVKGVLFETTRTGILISI 228 P ++ + + L+ L +K ++ T A N T + + Sbjct: 22 PVAAQSNDASEMSAEELETLFQKQKTRGLVLAPTNQEDAAANTADTAPEAQDSTYVEFAP 81 Query: 229 IDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 DQ N FD S+ + L + +V+ + I GHTDA A N R Sbjct: 82 EDQVNIQISFDFDSAALRDDQKPKLATLCQVMKSADIGTFRIIGHTDA---SGSASYNER 138 Query: 287 LSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LSL RA + L G+ E R+ + G +DP ANRR++ Sbjct: 139 LSLLRAEEVKRYLSGDCGIEEQRLEAV-GVGEQFPLDKADPRGDANRRVEF 188 >gi|332993882|gb|AEF03937.1| peptidoglycan-associated lipoprotein [Alteromonas sp. SN2] Length = 188 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 54/161 (33%), Gaps = 7/161 (4%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 P + + + + + V + + + + T Sbjct: 26 PSEEELAAERNRLAQEQAQAEQDARQAEAQRVEAEAAQRMKRSEEMVQQEMEALKNEQTV 85 Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD + PE +L K L + + ++I GHTD+ N L RA S Sbjct: 86 YFDFDRASIKPEFQRLLDKHAAFLVKNPSTKVTIEGHTDSR---GTPEYNIALGERRAQS 142 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 LM +GVS +I+ +S + + + + NRR Sbjct: 143 VETYLMNAGVSSSQITVVS-YGEEKSAVMGSTEYAFAQNRR 182 >gi|326798576|ref|YP_004316395.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] gi|326549340|gb|ADZ77725.1| OmpA/MotB domain protein [Sphingobacterium sp. 21] Length = 462 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS+ + L ++ L S +++ G+ N++L LDRA S Sbjct: 363 FEFDSSVLKTSSYPTLDQVSSDLRASGATLTLEGNASEE---GTTEYNYQLGLDRANSVK 419 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L+ SGV+ +I+ +S + ++ NR + Sbjct: 420 NYLVNSGVAASQINVVS-NGETKPVASNATEEGRQLNRNVQF 460 >gi|218462138|ref|ZP_03502229.1| hypothetical conserved membrane protein [Rhizobium etli Kim 5] Length = 386 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 8/115 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASP--FRNIAR 282 ++ +F + ++ I VL + I+I GHTD P N Sbjct: 229 LLQSSTPELFQSARPELTKSFEPLVASIAAVLKQNAELIGGITITGHTDNVPLQASNPLS 288 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 +N RLS RA + +L SGV ++ G A + +D +ANRRI+ Sbjct: 289 NNQRLSEARAATIASLLAASGVPTGQLKS-QGRAATQPLAGNDSREGRAANRRIE 342 >gi|59711533|ref|YP_204309.1| flagellar motor protein MotY [Vibrio fischeri ES114] gi|59479634|gb|AAW85421.1| flagellar motor protein MotY [Vibrio fischeri ES114] Length = 292 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 10/154 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 Q + I LS ++ V + S D T + FDK+S + Sbjct: 139 ADWQSPKQMIEVALSPVLFQE-QYNVFSMCIANLLPYSFEDISFTILHFDKNSDELNKAS 197 Query: 249 IVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L +I + + +++ + +TD+ N ++S RA G+ Sbjct: 198 KKRLSQIADFIKYTKDVDLVLVATYTDS---SGGKNVNQQVSERRALKLQNYFESIGLPA 254 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 DRI ++ + R + + NRR+ I + Sbjct: 255 DRI-RVHSYGERRPIADNATPIGKNKNRRVVISL 287 >gi|260773224|ref|ZP_05882140.1| sodium-type flagellar protein MotY precursor [Vibrio metschnikovii CIP 69.14] gi|260612363|gb|EEX37566.1| sodium-type flagellar protein MotY precursor [Vibrio metschnikovii CIP 69.14] Length = 325 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 52/159 (32%), Gaps = 7/159 (4%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + R Q + +SS L + V + I+ +S Sbjct: 171 QDWQSRDQRIEVMLSSVLFQPQYNVFSDCVANLLPYSFEDIAFTILHYD---RGNSVELN 227 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L +I + + ++ ++ + T LS RA S + G+ Sbjct: 228 KASQKRLAQIADYIRYNQDIDLVLVATYTDTSEGRNES-QSLSERRAESLQRYFRTLGLP 286 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 EDRI ++ G+ R + NRR+ I + Q Sbjct: 287 EDRI-QVQGYGQRRPIADNASPIGRDKNRRVVISLGRTQ 324 >gi|186477671|ref|YP_001859141.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815] gi|184194130|gb|ACC72095.1| OmpA/MotB domain protein [Burkholderia phymatum STM815] Length = 590 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 62/226 (27%), Gaps = 23/226 (10%) Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178 ++ + ++ L + + + + + + P Sbjct: 376 DESRNAADWLPHLDALMPLLATPGAEMKIDGTRVELSGAAADAKAGWLDRLQSLFGAPYQ 435 Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + A Q S L+ + + F Sbjct: 436 VRVFDPAQAVADAAQSFRNAARSLLAPGASCATTDLLKTL------------NLQVVNFA 483 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVIS-----IRGHTDASPFRNIARDNWRLSLDRAY 293 S + L + ++L + + G++D N LS +RA Sbjct: 484 SSDAHVPQSAFDDLGQSAKLLQACAKSGHALKLEVAGYSDNV---GSESANRELSKERAD 540 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 + L+K+GV D + G+ + R ++ + NRRI+ Sbjct: 541 AVRAFLVKAGVPADALIA-RGYGNVRAVASNATESGRFANRRIEFT 585 >gi|194290406|ref|YP_002006313.1| colicin transport component, peptidoglycan-associated outer membrane lipoprotein [Cupriavidus taiwanensis LMG 19424] gi|193224241|emb|CAQ70250.1| colicin transport component, peptidoglycan-associated outer membrane lipoprotein [Cupriavidus taiwanensis LMG 19424] Length = 169 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + + FD S P+ +L + L + I+G+TD + N L Sbjct: 64 KRSVYFDFDSYTVKPDYQGMLGAHAKYLGTNQGRKILIQGNTDER---GTSEYNLALGQK 120 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 RA + + L GV + ++ +S + K + + NRR DI Sbjct: 121 RAEAVRRSLASMGVPDSQMEAVS-LGKEKPKATGHDEASWAENRRADI 167 >gi|327393665|dbj|BAK11087.1| flagellar motor protein YiaD [Pantoea ananatis AJ13355] Length = 405 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 58/152 (38%), Gaps = 14/152 (9%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + L DL ++++ ++ + V + ++I +F + ++ P Sbjct: 251 QALLDLRQRLNDVIAAGQLE-----VSDGAFGSKVII-----PADKLFAEQGTVINPVGR 300 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L ++ + I + TD P ++ S RA S Q+L +++ Sbjct: 301 AILARVSSAMKDVKGTILVSVFTDDKPVDGSRFASSYEFSFARARSVSQLLQVQ-LADTH 359 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + + G + +D + NRR++I + Sbjct: 360 VIRSEGRGDSDPLLPNDSSENRTRNRRVEITL 391 >gi|257091687|ref|YP_003165328.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044211|gb|ACV33399.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 202 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 4/103 (3%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ P + L +I ++L+ + + I + GHTDA A N LS DRA S Sbjct: 100 FRPGSANITPASGNTLIEIAKILSLTPDRCIIVEGHTDAE---GNADRNMALSRDRANSV 156 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + + G E R G DP +S NRR+ V Sbjct: 157 VKFISDKGAVERRRLVPVGKGSTDPLKDLDPRDSRNRRVVFKV 199 >gi|146281586|ref|YP_001171739.1| outer membrane protein [Pseudomonas stutzeri A1501] gi|145569791|gb|ABP78897.1| probable outer membrane protein [Pseudomonas stutzeri A1501] Length = 343 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 8/102 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S L I + L I + GH+D N LS RA + Sbjct: 224 FPSSDVALDALGRAKLDIILQYLRADPSVNRIQLDGHSDN---SGNRLVNRDLSRRRALA 280 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 + L+ +GV E +I + +A+ + NRR+ Sbjct: 281 VQEYLIANGVPEQQI-TVRFHGERYPLVANSSEANRAKNRRV 321 >gi|157964921|ref|YP_001499745.1| peptidoglycan-associated lipoprotein precursor [Rickettsia massiliae MTU5] gi|157844697|gb|ABV85198.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia massiliae MTU5] Length = 164 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P+ L++ L+ E +++ GH D N L RA + Sbjct: 62 FAFDSSALSPKAKEELERQACWLSKHPEVKVTVEGHCDER---GAKEYNIGLGERRAAAV 118 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337 + L G+ +R++ IS + R + + + NRR + ++ Sbjct: 119 KKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVTVV 162 >gi|149911636|ref|ZP_01900247.1| OmpA family protein [Moritella sp. PE36] gi|149805306|gb|EDM65320.1| OmpA family protein [Moritella sp. PE36] Length = 211 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 9/184 (4%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 E + + D A + + + + V Sbjct: 20 AEIQAKAAAPSTPTETTVMPKQMAQENDLSDDDADGVIAYREQCLNSVLGSQVNNSGCGG 79 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281 + + Q F +S++ P ++ + + H + + I GH+ A Sbjct: 80 DTVNKVR-QELKVNFSNNSAVISPRYFADIKALSNFMQHYPDLDVVIEGHSSRQ---GSA 135 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338 N LS RA + +L+ G+S R+S I G+ RL + + NRRI + Sbjct: 136 ALNMDLSQRRAQAVMDLLINKFGISTSRVSAI-GYGFERLLDEGNNSYAHQRNRRIVAEL 194 Query: 339 EDRQ 342 Sbjct: 195 SGDN 198 >gi|157377275|ref|YP_001475875.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319649|gb|ABV38747.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3] Length = 201 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S P+ ++ I + + +I GH + N LS +RA + Sbjct: 78 LFANDSYYIDPQYYDQIEVIATFMTDYPNTVVTIEGHCSKT---GSYDHNLTLSQNRANA 134 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 L + G++ DR++ I G++ R S+ + NRR+ Sbjct: 135 VTTTLTEQFGINPDRLTAI-GYSFDRPVDMSETSIAHTRNRRV 176 >gi|325277836|ref|ZP_08143389.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] gi|324097047|gb|EGB95340.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] Length = 830 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 94/293 (32%), Gaps = 18/293 (6%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 ++Q + +T + + +R+++ +S + + ++ + + Sbjct: 540 FTTLQQVMLKPTADNLTRTLYLLTTLKVYQRNTRELQPVSGVDSVEAEALPHDNRAQSIA 599 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL--- 178 + + LS +Q+ + L + S+++ Sbjct: 600 DFGKATLDTYVMLSPAQREKADPAFLKAHLPDYWYPAIARHTGHSLSEANQGKGDQDYLY 659 Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +I + R D+ + + + + N + + ++ R I++ Sbjct: 660 ASRQITFYADQIRETDVPRILDNAFLISSSRNYIDSLRAQSLRAIETITLESDTLFAFGR 719 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 E L I L ++ + I I GH D ++ N ++S RA + Sbjct: 720 ADFQSLKSEGQNQLSAIASKLLNTPNIGKIVISGHADQL---GDSQSNLQVSKQRAQTIR 776 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340 L+ GV + + G + + D + NRR++I V Sbjct: 777 TYLVGKGVPAE-LVVAQGEGSRKPLVNCDMQQARAQLIKCLEPNRRVEIEVRG 828 >gi|307246344|ref|ZP_07528422.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255330|ref|ZP_07537142.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259780|ref|ZP_07541500.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852754|gb|EFM84981.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861717|gb|EFM93699.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866170|gb|EFM98038.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 369 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +A+ T I + G+TD N +LS Sbjct: 246 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 302 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338 RA + L+ G + ++ + G+ D + +RR+++ V Sbjct: 303 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 361 Query: 339 EDRQ 342 + + Sbjct: 362 QGAK 365 >gi|74318223|ref|YP_315963.1| outer membrane protein, porin-associated lipoprotein [Thiobacillus denitrificans ATCC 25259] gi|74057718|gb|AAZ98158.1| outer membrane protein, porin-associated lipoprotein [Thiobacillus denitrificans ATCC 25259] Length = 188 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289 + + FD S + E VL+ LA I+++G+ D N L Sbjct: 79 SKRSVFFDFDSFVVKDEYRPVLEAHAGYLASKRDARITLQGNADER---GSREYNLALGQ 135 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GVS+ ++ IS F + + +D + NRR DI+ Sbjct: 136 KRAEAVRKALAVLGVSDAQMEAIS-FGEEKPRNEADTEEAYAENRRTDIV 184 >gi|124266540|ref|YP_001020544.1| putative peptidoglycan-associated lipoprotein [Methylibium petroleiphilum PM1] gi|124259315|gb|ABM94309.1| putative peptidoglycan-associated lipoprotein precursor [Methylibium petroleiphilum PM1] Length = 179 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 7/105 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S + E ++ +VL + + I GHTD N L RA Sbjct: 76 VYFDFDSFLVKDEYRPIVDNYSKVLNSDRKKRVVIEGHTDER---GGREYNLALGQKRAE 132 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 + + L GV + +I +S + R + + + + NRR ++ Sbjct: 133 AVAKSLTLLGVQDGQIESVS-YGKERPAVTGSDEAAWAKNRRAEL 176 >gi|310819072|ref|YP_003951430.1| outer membrane domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309392144|gb|ADO69603.1| Outer membrane domain protein [Stigmatella aurantiaca DW4/3-1] Length = 480 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 13/213 (6%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + S + + K + +++ + E L A Sbjct: 262 GPGLSGAPGAPRFRIVAGVSFRSEPPPKLSFMDEHADNELQLTLAQAKPSSEEARVLPVS 321 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + +G D + + + + + F + SS P + + Sbjct: 322 TWEFNALTREEPAGPAEDKPAEPIRPYVPTPQEKLVLRGDIH---FVRGSSEL-PGVVPL 377 Query: 252 LQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L ++ L+ + I I GH D + +SL RA + + L+ GV ++ Sbjct: 378 LDQVILQLSGFSAGGTIVIEGHADTE---GTDTSDMFMSLRRAQAVRRYLIDQGVPGTKV 434 Query: 310 SKISGFAHHRLKIA---SDPMNSANRRIDILVE 339 +I G H + ++ + NRR ++LV Sbjct: 435 -RIRGLGSHWPVSSKPATEQEHQLNRRAEVLVL 466 >gi|303250857|ref|ZP_07337050.1| major outer membrane protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253079|ref|ZP_07534962.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650272|gb|EFL80435.1| major outer membrane protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859448|gb|EFM91478.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 371 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +A+ T I + G+TD N +LS Sbjct: 248 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 304 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338 RA + L+ G + ++ + G+ D + +RR+++ V Sbjct: 305 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 363 Query: 339 EDRQ 342 + + Sbjct: 364 QGAK 367 >gi|301166059|emb|CBW25633.1| peptidoglycan-associated lipoprotein precursor [Bacteriovorax marinus SJ] Length = 169 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T F +SS+ L E L + I + GH D + N L R Sbjct: 62 KTVFFGFNSSVLSTSARETLNANAEFLKANPSVEIQVEGHCDER---GGVQYNLALGERR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341 A + L+ GV+ RIS IS F R + ++NRR + ++ + Sbjct: 119 AVAVKDHLVAMGVNSSRISTIS-FGKERPVAFGHDESAWASNRRGNFIITAK 169 >gi|212634139|ref|YP_002310664.1| OmpA protein [Shewanella piezotolerans WP3] gi|212555623|gb|ACJ28077.1| OmpA [Shewanella piezotolerans WP3] Length = 187 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ + S L VL++I L + + G+TD+ N RLSL RA S Sbjct: 85 FEFAKSEILSSQRAVLERISAWLTQVPARLLLVGYTDSI---GGEAFNHRLSLLRAKSVK 141 Query: 297 QVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 Q L+ + +R I G + + NRR++ V Sbjct: 142 QALITEFNFEPERFD-IKGVGSQAPIANNRTGSGRALNRRVEFYV 185 >gi|165976856|ref|YP_001652449.1| major outer membrane protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303253773|ref|ZP_07339908.1| major outer membrane protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248471|ref|ZP_07530491.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307257499|ref|ZP_07539265.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|165876957|gb|ABY70005.1| major outer membrane protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302647357|gb|EFL77578.1| major outer membrane protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855039|gb|EFM87222.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306864011|gb|EFM95928.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 368 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +A+ T I + G+TD N +LS Sbjct: 245 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 301 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338 RA + L+ G + ++ + G+ D + +RR+++ V Sbjct: 302 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 360 Query: 339 EDRQ 342 + + Sbjct: 361 QGAK 364 >gi|307250689|ref|ZP_07532626.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857297|gb|EFM89416.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 368 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +A+ T I + G+TD N +LS Sbjct: 245 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 301 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338 RA + L+ G + ++ + G+ D + +RR+++ V Sbjct: 302 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 360 Query: 339 EDRQ 342 + + Sbjct: 361 QGAK 364 >gi|269976278|ref|ZP_06183274.1| flagellar motor protein MotD [Mobiluncus mulieris 28-1] gi|269935607|gb|EEZ92145.1| flagellar motor protein MotD [Mobiluncus mulieris 28-1] Length = 325 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 71/187 (37%), Gaps = 7/187 (3%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 ++ + + E+I AM L + +++ L+ + Sbjct: 77 SGSTSAVNLGSMMGNDTTTAAGQPERIQAMAEASHLNQIKQQVEQALAAAGQTGA---LQ 133 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 T G+++ ++ F + P VL + VLA + E ++I G+ D +P Sbjct: 134 MRITEKGLVLGMVASDTY--FKPGDAEVQPTAQAVLAALAPVLAGTPEDVAIEGYADPNP 191 Query: 277 -FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-KIASDPMNSANRRI 334 + N+ L+ RA L GV ++ IS A H+ A S NRR+ Sbjct: 192 QYSAKYPSNYHLAAGRAIEVLIHLRNGGVPGSKLRTISYGADHQTQVEAGQDAWSLNRRV 251 Query: 335 DILVEDR 341 DI++ R Sbjct: 252 DIVIMSR 258 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 24/205 (11%), Positives = 56/205 (27%), Gaps = 6/205 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK P N W + Y D +TV+M FLV++ I+ D + + + Sbjct: 3 KKKHECPEPENTERWAVSYLDMITVMMCLFLVLYAISQVDAGKLAKLSKSLAAGFNQSLQ 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + S + + + + + + +L+ + Sbjct: 63 VVSPLHTTSGLGLLSGSTSAVNLG------SMMGNDTTTAAGQPERIQAMAEASHLNQIK 116 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 Q + + + L + + YF P ++ + A L + Sbjct: 117 QQVEQALAAAGQTGALQMRITEKGLVLGMVASDTYFKPGDAEVQPTAQAVLAALAPVLAG 176 Query: 199 ISSTLSGLVADNIVKGVLFETTRTG 223 ++ + + Sbjct: 177 TPEDVAIEGYADPNPQYSAKYPSNY 201 >gi|126208885|ref|YP_001054110.1| outer membrane protein P5 precursor [Actinobacillus pleuropneumoniae L20] gi|126097677|gb|ABN74505.1| outer membrane protein P5 precursor [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 368 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +A+ T I + G+TD N +LS Sbjct: 245 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 301 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338 RA + L+ G + ++ + G+ D + +RR+++ V Sbjct: 302 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 360 Query: 339 EDRQ 342 + + Sbjct: 361 QGAK 364 >gi|330719944|gb|EGG98406.1| General secretion pathway protein A [gamma proteobacterium IMCC2047] Length = 141 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 8/114 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288 +R+T + + PE + L I + + + + GHTD+ N R+S Sbjct: 31 ERSTIFYASGRTKLAPEVLEQLDLIIRYVKADKRIKRVVVDGHTDS---AGDKESNIRVS 87 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 RA K+G+S RI + A+D + NRR+ I ++ Sbjct: 88 KQRANLVVAYFKKAGISSKRIV-MRWHGDRYPTAANDTDEGQARNRRVTIRLDR 140 >gi|330807890|ref|YP_004352352.1| hypothetical protein PSEBR_a1170 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375998|gb|AEA67348.1| Conserved hypothetical protein; putative outer membrane protein, putative OmpA family [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 370 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 81/262 (30%), Gaps = 12/262 (4%) Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 D + S D + + + Q K + S+ K Sbjct: 25 DAEGGSSWWSFGSSDKVVAKDTAPAAPLKPAAVAPQAKAESATHWWWPFSSDDAADVAKK 84 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 + + + E N + + +E A+ + + Sbjct: 85 DDVKPQDKPEAKAPAVAKAEAESNGKWWWPFGGKDQETAKAVP-MPDPKVTQAWLDDYEP 143 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVL-AHS 262 L + E ++++ F+ L P T+ ++ ++L A Sbjct: 144 KLRTAIQDSKLQLERRDNVLVVT---APVDGSFNPDRPAMLLPVTLGPFTRVAKILEADP 200 Query: 263 TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I GH D A N +LS +RA S + SG+ DR+ + G + Sbjct: 201 KTAVLILGHADT---SGAAPANLKLSQERAQSVAAIFRLSGLQRDRLM-LRGMGAVAPRA 256 Query: 323 ASDP--MNSANRRIDILVEDRQ 342 A+D + NRR+++LV Sbjct: 257 ANDSVEGRALNRRVELLVTPAN 278 >gi|78186499|ref|YP_374542.1| peptidoglycan-associated lipoprotein [Chlorobium luteolum DSM 273] gi|78166401|gb|ABB23499.1| peptidoglycan-associated lipoprotein [Chlorobium luteolum DSM 273] Length = 171 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ SS + LQ+ + + I GH D + N L R Sbjct: 66 GDVFYEFDSSELAADAQTQLQQNASWMNSNAAASTMIEGHCDER---GTSEYNIALGERR 122 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339 A +A + +++ GV RI +S + + A + NRR +++ Sbjct: 123 ASTAKEYIVRLGVPSSRIETVS-YGEEKPFAAGHDEAAWSKNRRAHFILK 171 >gi|325105157|ref|YP_004274811.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] gi|324974005|gb|ADY52989.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] Length = 587 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 89/286 (31%), Gaps = 22/286 (7%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 G ++ S+ I + + +G+T + + + Sbjct: 303 GVSVFIKSETGTWNFLTDVNGEIPIIKNAKRAIYFMSGSKNSVGTTTASIAEKDFDEDSE 362 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + + +L ++ KD K ++ ++ N + + Sbjct: 363 LIYRELLHNDPRFTLVGETVSQKDDSKLPNINTALTNLTNSTTRSQISDTEAKFAYQLAP 422 Query: 193 QDLAKKISSTL---SGLVADNIVKGVLFETTRTGILISIIDQRNTPMF-------DKSSS 242 + ++ S + ET + + + D F D S Sbjct: 423 ESDYSVVAHQFGKFSQTEKVSTKGLDRSETFYVKLKLPVGDIETGKTFVLKDIHYDFDKS 482 Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 P+ ++L + ++ + I + HTD N LS RA SA +++ Sbjct: 483 NIRPDAALILDNVVSIMKQNPSLKIELSSHTDCR---GNNAYNLILSDARARSAVAYIVR 539 Query: 302 SGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 +G+ ++R+ G+ +L S+ + NRR ++ V Sbjct: 540 NGIEKNRLVA-KGYGETKLLNNCYDGVRCSEVEHQRNRRTELRVLK 584 >gi|257460460|ref|ZP_05625561.1| putative chemotaxis protein MotB [Campylobacter gracilis RM3268] gi|257441791|gb|EEV16933.1| putative chemotaxis protein MotB [Campylobacter gracilis RM3268] Length = 340 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 114/325 (35%), Gaps = 42/325 (12%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+++ I +YF S+ + + Sbjct: 12 W-IAYADLMAGLLFVFVLLVG---------GIIVKYFLTQSNLQEKESQISSALASLQSQ 61 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 ++ ++++ + L I +T+ +KQ I L+ + K +L +S Sbjct: 62 EKKSAELEALNKIFSDQLEKLNIENTDLRKQNSIYFIQIEDLTE-MAEKLKKENLDINSL 120 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST------LSGL 206 K + + + L L+K++ K + L +I + + Sbjct: 121 LQKAREDANATISQNELKIAFLLDQLTKKESDFNKILQDLNVTKNRIRNLTGMKVKIIAD 180 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IG 256 + + + + + + +S ++ +FDK SS L+ Sbjct: 181 LKEKLGGKIRIDNESGAMTLS-----SSILFDKGSSELKEGAKETLRSTLQSYFAALLNN 235 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--DRISKISG 314 + + + + I I GHTD+ N LS +RA++ + E + SG Sbjct: 236 DEIRENLDQIIIEGHTDSD---GGYLYNLELSQNRAFAVMDFINSWNKDERLQKYLIASG 292 Query: 315 FAHHRLKIA---SDPMNSANRRIDI 336 ++ + + D S RRI+I Sbjct: 293 RSYTQPVMRRGVEDKDAS--RRIEI 315 >gi|261868491|ref|YP_003256413.1| peptidoglycan-associated lipoprotein [Aggregatibacter actinomycetemcomitans D11S-1] gi|293390507|ref|ZP_06634841.1| peptidoglycan-associated lipoprotein [Aggregatibacter actinomycetemcomitans D7S-1] gi|62548396|gb|AAX86841.1| peptidoglycan-associated lipoprotein [Aggregatibacter actinomycetemcomitans] gi|261413823|gb|ACX83194.1| peptidoglycan-associated lipoprotein [Aggregatibacter actinomycetemcomitans D11S-1] gi|290951041|gb|EFE01160.1| peptidoglycan-associated lipoprotein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 155 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 + + NT F E +L L + + + G+TD N Sbjct: 46 LQQRYNTVYFGFDKYDIEGEYTQILDAHAAYLNATPATSVRVEGNTDER---GTPEYNMA 102 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 L RA + L GV +IS +S + + + + + NRR Sbjct: 103 LGERRARAVQNFLTAKGVKAGQISTVS-YGEEKPAVLGHDESAYAKNRR 150 >gi|53713187|ref|YP_099179.1| OmpA family outer membrane protein [Bacteroides fragilis YCH46] gi|60681448|ref|YP_211592.1| OmpA family membrane protein [Bacteroides fragilis NCTC 9343] gi|253566855|ref|ZP_04844307.1| OmpA family outer membrane protein [Bacteroides sp. 3_2_5] gi|265763283|ref|ZP_06091851.1| OmpA family outer membrane protein [Bacteroides sp. 2_1_16] gi|52216052|dbj|BAD48645.1| OmpA family outer membrane protein [Bacteroides fragilis YCH46] gi|60492882|emb|CAH07657.1| putative outer membrane protein OmpA-family [Bacteroides fragilis NCTC 9343] gi|251944418|gb|EES84907.1| OmpA family outer membrane protein [Bacteroides sp. 3_2_5] gi|263255891|gb|EEZ27237.1| OmpA family outer membrane protein [Bacteroides sp. 2_1_16] gi|301162908|emb|CBW22455.1| putative outer membrane protein OmpA-family [Bacteroides fragilis 638R] Length = 224 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 6/112 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + +F +SS + L + +L ++I GHTD N ++S + Sbjct: 108 PSGILFAFNSSALSAASKQSLAEFANILKEDPTVDVAIIGHTDKV---GSYEANQKVSAN 164 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 RAY+ L GV + K+ G + + S+ NRR++I + + Sbjct: 165 RAYAVENYLQACGVKPYQFKKVEGVGYSQ-YNESETPE-QNRRVEIFMYASE 214 >gi|309751191|gb|ADO81175.1| Outer membrane protein P5 [Haemophilus influenzae R2866] Length = 358 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 211 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 270 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS +RA S + GV+ D IS +G+ Sbjct: 271 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGEANPV 326 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 327 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 358 >gi|229844879|ref|ZP_04465017.1| outer membrane protein P5 [Haemophilus influenzae 6P18H1] gi|229812260|gb|EEP47951.1| outer membrane protein P5 [Haemophilus influenzae 6P18H1] Length = 355 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 54/166 (32%), Gaps = 17/166 (10%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + +D I S +G+ + + + F + P+ Sbjct: 195 QNSTRDYNPWIGSINAGISYRFGQGEAPVVAAPEMVSKTFSLNSD-VTFAFGKANLKPQA 253 Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 L + ++ +++ G+TD N +LS +RA S + GV+ D Sbjct: 254 QATLNSVYGEISQVKSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAAD 310 Query: 308 RISKISGFAHHRLK--IASDPMNSA---------NRRIDILVEDRQ 342 IS +G+ D + +RR++I V + Sbjct: 311 AISA-TGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAVNGTK 355 >gi|170739237|ref|YP_001767892.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46] gi|168193511|gb|ACA15458.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46] Length = 227 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 13/221 (5%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 T + R + L+ +L + + D+ K+ + Sbjct: 2 TGSANTFSRRLSRAALLAGLLTLGSAAGALAQKAPSEADIAKALIGAPAEAPVATGPTRS 61 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 LS L + + S + + L + I + F Sbjct: 62 LSTSVRGEAASAGALGEDRSFLDSLRNRASLTPSERSKLAAVSADKPSIDLEIP-----F 116 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 D +S+ P+ + +++ +G LA I GHTD + + N LS RA + Sbjct: 117 DYNSAKIGPKALPMVKSLGAALARQELKGNTFLIVGHTD---GKGKDQANQALSERRAQA 173 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 ++++ GV + + G+ +LK A++P NRR+ Sbjct: 174 VKDYIVQNYGVPATNLVSV-GYGKTQLKDAANPNAPVNRRV 213 >gi|108760432|ref|YP_632749.1| peptidoglycan-associated lipoprotein (Pal) family protein [Myxococcus xanthus DK 1622] gi|108464312|gb|ABF89497.1| peptidoglycan-associated lipoprotein (Pal) family protein [Myxococcus xanthus DK 1622] Length = 171 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289 + F+ S+ PE+ +L ++ L +++ GHT N L Sbjct: 63 SADPVYFELDSATLRPESRDMLAQLATGLRERPLTRVTVSGHTCEL---GTTEYNIALGH 119 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA L GV ++S +S F R + ++ NRR + Sbjct: 120 RRAAVVRDYLRNLGVESSQLSIVS-FGEERPLSDAHTEDALRRNRRAEFT 168 >gi|115372572|ref|ZP_01459880.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] gi|115370534|gb|EAU69461.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] Length = 490 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 13/213 (6%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + S + + K + +++ + E L A Sbjct: 272 GPGLSGAPGAPRFRIVAGVSFRSEPPPKLSFMDEHADNELQLTLAQAKPSSEEARVLPVS 331 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + +G D + + + + + F + SS P + + Sbjct: 332 TWEFNALTREEPAGPAEDKPAEPIRPYVPTPQEKLVLRGDIH---FVRGSSEL-PGVVPL 387 Query: 252 LQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L ++ L+ + I I GH D + +SL RA + + L+ GV ++ Sbjct: 388 LDQVILQLSGFSAGGTIVIEGHADTE---GTDTSDMFMSLRRAQAVRRYLIDQGVPGTKV 444 Query: 310 SKISGFAHHRLKIA---SDPMNSANRRIDILVE 339 +I G H + ++ + NRR ++LV Sbjct: 445 -RIRGLGSHWPVSSKPATEQEHQLNRRAEVLVL 476 >gi|85716801|ref|ZP_01047768.1| OmpA/MotB [Nitrobacter sp. Nb-311A] gi|85696408|gb|EAQ34299.1| OmpA/MotB [Nitrobacter sp. Nb-311A] Length = 214 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S+ P T L +G+ L VI + GHTD + N LS RA Sbjct: 103 FDFDSAAVTPRTEPQLHSLGKALTSDELAGSVIMLGGHTD---GKGSDAYNHNLSERRAE 159 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + + LM+ + + + G+ K ++DP NRR++++ Sbjct: 160 AVKRFLMERYKIPAANLVAV-GYGKEGYKNSADPFAPENRRVEVV 203 >gi|103488202|ref|YP_617763.1| OmpA/MotB [Sphingopyxis alaskensis RB2256] gi|98978279|gb|ABF54430.1| OmpA/MotB [Sphingopyxis alaskensis RB2256] Length = 294 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD ++ + L + + G+TD++ N LS RA + Sbjct: 183 FDVGKAVLSAQAKADLCATAAAAEAMDNALLLVVGYTDST---GSQEFNQMLSEKRAGAV 239 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343 L ++ G R+ +G A ++ + NRR+ + V +G Sbjct: 240 VNHLQQACGWKPYRMLTPTGMAEADPAADNETPEGKAQNRRVAVNVLVSKG 290 >gi|227876751|ref|ZP_03994860.1| flagellar motor protein B [Mobiluncus mulieris ATCC 35243] gi|306817698|ref|ZP_07451440.1| OmpA/MotB domain protein [Mobiluncus mulieris ATCC 35239] gi|227842648|gb|EEJ52848.1| flagellar motor protein B [Mobiluncus mulieris ATCC 35243] gi|304649512|gb|EFM46795.1| OmpA/MotB domain protein [Mobiluncus mulieris ATCC 35239] Length = 325 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 71/187 (37%), Gaps = 7/187 (3%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 ++ + + E+I AM L + +++ L+ + Sbjct: 77 SGSTSAVNLGSMMGNDTTTAAGQPERIQAMAEASHLNQIKQQVEQALAAAGQTGA---LQ 133 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 T G+++ ++ F + P VL + VLA + E ++I G+ D +P Sbjct: 134 MRITEKGLVLGMVASDTY--FKPGDAEVQPTAQAVLAALAPVLAGTPEDVAIEGYADPNP 191 Query: 277 -FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-KIASDPMNSANRRI 334 + N+ L+ RA L GV ++ IS A H+ A S NRR+ Sbjct: 192 QYSAKYPSNYHLAAGRAIEVLIHLRNGGVPGSKLRTISYGADHQTQVEAGQDAWSLNRRV 251 Query: 335 DILVEDR 341 DI++ R Sbjct: 252 DIVIMSR 258 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 24/205 (11%), Positives = 56/205 (27%), Gaps = 6/205 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK P N W + Y D +TV+M FLV++ I+ D + + + Sbjct: 3 KKKHECPEPENTERWAVSYLDMITVMMCLFLVLYAISQVDAGKLAKLSKSLAAGFNQSLQ 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + S + + + + + + +L+ + Sbjct: 63 VVSPLHTTSGLGLLSGSTSAVNLG------SMMGNDTTTAAGQPERIQAMAEASHLNQIK 116 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 Q + + + L + + YF P ++ + A L + Sbjct: 117 QQVEQALAAAGQTGALQMRITEKGLVLGMVASDTYFKPGDAEVQPTAQAVLAALAPVLAG 176 Query: 199 ISSTLSGLVADNIVKGVLFETTRTG 223 ++ + + Sbjct: 177 TPEDVAIEGYADPNPQYSAKYPSNY 201 >gi|257092704|ref|YP_003166345.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045228|gb|ACV34416.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 221 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 52/173 (30%), Gaps = 19/173 (10%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 A K + + + + +G I++ +FD + Sbjct: 56 PAAAAKDPAGCKCDKDLLPKEVCEPMVAKAAPAAAPAAKPSGDKITVAAD---ALFDFNK 112 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + PE L ++ + I GHTD N +LS RA + Q L+ Sbjct: 113 ATLRPEGKAKLDEVVAKAGAIKLEVIIAVGHTDRI---GSDAYNQKLSERRAAAVKQYLV 169 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA-----------NRRIDILVEDRQ 342 G+ +R+ G D +RR+DI + + Sbjct: 170 SKGIDANRVYT-EGKGKKNPVTKPDQCLGKTSPKVIACLQPDRRVDIELIGTK 221 >gi|254507025|ref|ZP_05119163.1| outer membrane protein [Vibrio parahaemolyticus 16] gi|219550020|gb|EED27007.1| outer membrane protein [Vibrio parahaemolyticus 16] Length = 204 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 58/170 (34%), Gaps = 15/170 (8%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 ++ L D K L + ++ L + +++ +F S Sbjct: 30 AAPVAEQIADLTDDDKDGVVNARDLCPNTPEGALVDNDGCGESLKNEEERQLRILFANDS 89 Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 P ++ + E L I I+G N LS RA++ L+ Sbjct: 90 YEINPIFSDQIKTMAEFLQKYQSASIQIQGFASKV---GSPEYNLALSRKRAHAVQDELI 146 Query: 301 KSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRI--------DILVED 340 V R+ I G+ RL+ + ++ NR++ +++VE+ Sbjct: 147 SFDVDPSRV-SIVGYGETRLEAEGDDETSHALNRKVTATVVGLSEVVVEE 195 >gi|304320241|ref|YP_003853884.1| OmpA family protein [Parvularcula bermudensis HTCC2503] gi|303299143|gb|ADM08742.1| OmpA family protein [Parvularcula bermudensis HTCC2503] Length = 175 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 N F+ + E+I L++ + E I + GH D N L R Sbjct: 65 NRVFFEYNEYALGQESIATLRRQAAWMKEYPEARIRLEGHADER---GTREYNLALGARR 121 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANR 332 A +A L+ G+ RI+ +S + R + NR Sbjct: 122 ASAAKSYLVDLGIDPSRITTVS-YGKERPIDPRSTPEAWARNR 163 >gi|99082204|ref|YP_614358.1| OmpA/MotB [Ruegeria sp. TM1040] gi|99038484|gb|ABF65096.1| OmpA/MotB [Ruegeria sp. TM1040] Length = 167 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F S PE V+L L + V++I GH D N L R Sbjct: 57 DRVLFLVDQSSISPEAQVILDGQARWLQANPAYVVTIEGHADER---GTREYNLALGASR 113 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A SA L+ GV+ RI +S F R + NRR Sbjct: 114 ANSARDYLISKGVAASRIQTVS-FGKERPIEICSEQSCYEKNRR 156 >gi|34558375|ref|NP_908190.1| putative flagellar motor protein [Wolinella succinogenes DSM 1740] gi|34484094|emb|CAE11090.1| HYPOTHETICAL PROTEIN-PUTATIVE FLAGELLAR MOTOR PROTEIN [Wolinella succinogenes] Length = 261 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 7/121 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIAR-D 283 I+ +F + + K + + + +RGHTD P A D Sbjct: 124 IVRLPAALLFKEGGIEVENSDGFLFVKRMAEIVNRLPKDVHVEVRGHTDTLPLPAQAPQD 183 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 L+ RA S ++L+K G+ RI+ + G + + NRR+DI + + Sbjct: 184 KLELTAKRALSVSKLLVKEGIDPKRITTV-GRGDQDPLTHARTPEAQESNRRVDIYLYPK 242 Query: 342 Q 342 + Sbjct: 243 E 243 >gi|282848786|ref|ZP_06258180.1| OmpA family protein [Veillonella parvula ATCC 17745] gi|294795118|ref|ZP_06760253.1| outer membrane porin F (Root adhesin) [Veillonella sp. 3_1_44] gi|282581500|gb|EFB86889.1| OmpA family protein [Veillonella parvula ATCC 17745] gi|294454480|gb|EFG22854.1| outer membrane porin F (Root adhesin) [Veillonella sp. 3_1_44] Length = 345 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + L + + + G+ D + N LS R Sbjct: 243 FDSDQDVARADQYPNLTAAVNAANQYSQDQVKLMGNADTD---ANPQYNIALSERRVQHV 299 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 Q L+ GVS DR+ I+ + + + NRR+D+ + Sbjct: 300 AQYLVNHGVSADRLIGIA-NGDVKPVATNSTAAGKAENRRVDVYIHR 345 >gi|269797531|ref|YP_003311431.1| OmpA/MotB domain protein [Veillonella parvula DSM 2008] gi|269094160|gb|ACZ24151.1| OmpA/MotB domain protein [Veillonella parvula DSM 2008] Length = 345 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + L + + + G+ D + N LS R Sbjct: 243 FDSDQDVARADQYPNLTAAVNAANQYSQDQVKLMGNADTD---ANPQYNIALSERRVQHV 299 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 Q L+ GVS DR+ I+ + + + NRR+D+ + Sbjct: 300 AQYLVNHGVSADRLIGIA-NGDVKPVATNSTAAGKAENRRVDVYIHR 345 >gi|330998926|ref|ZP_08322653.1| putative outer membrane protein A [Parasutterella excrementihominis YIT 11859] gi|329576140|gb|EGG57659.1| putative outer membrane protein A [Parasutterella excrementihominis YIT 11859] Length = 212 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 23/160 (14%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 ++ L + + + +++ +F + ++ PE I L K+ Sbjct: 58 LAEAQGALGQNCQCDTDIIKCEAGAERVTLSADT---LFAFNKAVLKPEGIAKLTKLTSR 114 Query: 259 LAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 ++ + +V+ I G+ D A N +LS RA + L + GV RI G Sbjct: 115 MSGLTLDVVMINGYADRI---GGAAYNQKLSQRRADAVKTFLAEHGVPAARIHA-EGKGQ 170 Query: 318 HRLKI--ASDPMNSA-------------NRRIDILVEDRQ 342 + + NRR I V+ + Sbjct: 171 ADPVVNCPNPSAKGEIKTFKQLIECLQPNRRAVIEVKGTR 210 >gi|212712432|ref|ZP_03320560.1| hypothetical protein PROVALCAL_03526 [Providencia alcalifaciens DSM 30120] gi|212684889|gb|EEB44417.1| hypothetical protein PROVALCAL_03526 [Providencia alcalifaciens DSM 30120] Length = 165 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q NT F PE +L L + + + GH D N L Sbjct: 59 QNNTVYFGFDKYNVSPEYAEMLDAHAAFLRSNPSVRVVVEGHADER---GTPEYNIALGE 115 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 RA + L GVS D++S +S + + + + NRR I Sbjct: 116 RRANAVKMYLQSKGVSGDQVSLVS-YGKEKPAVLGHTEADYAKNRRAVI 163 >gi|154174275|ref|YP_001408803.1| Omp18 [Campylobacter curvus 525.92] gi|112803716|gb|EAU01060.1| Omp18 [Campylobacter curvus 525.92] Length = 168 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 9/121 (7%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV---ISIRGHTDASPFRNI 280 ++ +I Q FD + + + + I + G+ D Sbjct: 51 LIANIESQVKNVYFDFDKFNIKADQQGTVSANAAIFNQADAQALSIKVEGNCDEW---GT 107 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 N+ L L RA S L+++GVS DRI + F + NRR + V Sbjct: 108 DEYNYALGLKRAKSTKDALVRNGVSADRI-AVVSFGESNPVCTDKTKACDAQNRRAEFKV 166 Query: 339 E 339 Sbjct: 167 L 167 >gi|86360406|ref|YP_472294.1| hypothetical protein RHE_PE00129 [Rhizobium etli CFN 42] gi|86284508|gb|ABC93567.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 653 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 29/257 (11%), Positives = 68/257 (26%), Gaps = 14/257 (5%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 + ++Q ++ + K + + + + +++ E ++ Sbjct: 398 GQFQVNAQRRVAALRLAAAQEMMAANKPVTEYEPLLVAADSPQVLWQASATLGEIYFSAR 457 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 ++ + +S A + + + Sbjct: 458 RFADAAADYQQAIEIIKNETRTPKAPPAETISDLIQRAAQARILAANPTSDNPQGSFVPA 517 Query: 208 ADNIVKGVLFETTRTGIL-ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEV 265 + GVL + I + FD S +++ E L Sbjct: 518 EKDHRSGVLGGIYSENVRGIVPVSIPVPITFDFDKSTFTSIGTEAAEELLEALKEQKPGR 577 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 + + GHTD + N +LS RA + L G+ G + Sbjct: 578 VILIGHTDR---KGGDDYNQKLSERRAQAVADFLKNHGIDAT--IDAEGRGASEPVDVTA 632 Query: 326 PM-------NSANRRID 335 ++ NRR++ Sbjct: 633 TANLTEDDIDALNRRVE 649 >gi|327405082|ref|YP_004345920.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327320590|gb|AEA45082.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 694 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +D +S P + VL K+ E L + ++ I HTDA N LS RA S Sbjct: 562 YDFNSDKLRPASEAVLDKLLEFLELNNNIVVEINSHTDAR---GKDIYNLDLSQRRAKSC 618 Query: 296 YQVLMKSGVSEDRISKISGFAHHRL 320 L+ G++ +R+ G+ + Sbjct: 619 VDYLVSKGITPERLIA-KGYGETQP 642 >gi|298565977|dbj|BAJ09608.1| hypothetical protein [Pasteurella pneumotropica] Length = 289 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 17/130 (13%) Query: 224 ILISIIDQRNTPMF-DKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI 280 + + +D F + LP +++ + + + + GHTD Sbjct: 165 LAVESLDASALFGFNKSGYNDILPNGKEKIREFADKVKEMPSISKILVSGHTDPI---GS 221 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-DP-MNSA-------N 331 N LS RA + L K+GVS + G+ + + D ++ N Sbjct: 222 TAYNQTLSQKRANTVKLALQKAGVSTP--IEAVGYGKAEPVVTTCDTYKDAQRNQCNQPN 279 Query: 332 RRIDILVEDR 341 RR++I V + Sbjct: 280 RRVEIAVYGK 289 >gi|297380015|gb|ADI34902.1| flagellar motor protein MotB [Helicobacter pylori v225d] Length = 255 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLIKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 36/96 (37%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKSKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKP 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 63 EAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|261343491|ref|ZP_05971136.1| peptidoglycan-associated lipoprotein [Providencia rustigianii DSM 4541] gi|282568637|gb|EFB74172.1| peptidoglycan-associated lipoprotein [Providencia rustigianii DSM 4541] Length = 165 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q NT F PE +L L + + + GH D N L Sbjct: 59 QNNTVYFGFDKYNVSPEYAEMLDAHAAFLRSNPSVRVVVEGHADER---GTPEYNIALGE 115 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 RA + L GVS D++S +S + + + + NRR I Sbjct: 116 RRANAVKMYLQSKGVSGDQVSLVS-YGKEKPAVLGHTEADYAKNRRAVI 163 >gi|209168782|gb|ACI42382.1| major outer membrane protein [Aeromonas hydrophila] Length = 344 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 41/125 (32%), Gaps = 18/125 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 + +F PE + L + + + + G+TD N +LS Sbjct: 220 NSDVLFAFGKDSLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLS 276 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDIL 337 RA + L+ G++ ++ + G + + +RR+++ Sbjct: 277 EARARTVANFLVSKGMAASKV-AVEGRGEANPVTGTKCNGVKAKTQLISCLAPDRRVEVR 335 Query: 338 VEDRQ 342 V Q Sbjct: 336 VSGVQ 340 >gi|288959276|ref|YP_003449617.1| outer membrane protein [Azospirillum sp. B510] gi|288911584|dbj|BAI73073.1| outer membrane protein [Azospirillum sp. B510] Length = 146 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 6/103 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +S++ PE+ VL K+ V+ + T I GHTDA N LS RA + Sbjct: 44 FDFNSAVIKPESRAVLDKVAAVMTTAGTTRFRIVGHTDAV---GGDAANLALSKRRAAAV 100 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + L + + DR+ ++SG L + P +ANRR++I+ Sbjct: 101 VEYLASRHRIQRDRL-EVSGMGARELLLPDQPTAAANRRVEII 142 >gi|295395643|ref|ZP_06805835.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030] gi|294971459|gb|EFG47342.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030] Length = 563 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 81/287 (28%), Gaps = 20/287 (6%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + + + P M + + D +E I+ + L S K Sbjct: 101 RMVAAWLEPESGPFMGSRALASGMDALNYSPTTKLWDPQTNEIISP--LQLNDESNRDKC 158 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + + + +++ + ++ I++ Sbjct: 159 HCSGIHSRSSDVPTTKERVELFWVDFPAPANKEVRVIPSEWSGPIDQPVTITDNQPFNNP 218 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN---TPMFDK 239 + +D A + S + D + + N +FD Sbjct: 219 APDIATFADNEDPADEYGSPEAKRYIDKLQDKTESLLGSSTTTADATTALNITADVLFDF 278 Query: 240 SSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S + VL + + L + + + GHTDA + N +LS DRA + + Sbjct: 279 DKSEINDKGHKVLGNVAKTLNQQAAGQTVKVVGHTDA---KGDENYNKKLSEDRAKAVQK 335 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRIDI 336 L ++ ++ G + + + + NRR+ Sbjct: 336 ELQPQ-LNNVKLET-EGRGETQPIAKNFDDKGNDLEANQAKNRRVSF 380 >gi|261380050|ref|ZP_05984623.1| OmpA family protein [Neisseria subflava NJ9703] gi|284797260|gb|EFC52607.1| OmpA family protein [Neisseria subflava NJ9703] Length = 253 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 5/121 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 G V + V + + + +F PE L + + L Sbjct: 55 DKATEGRVECGDREAVAPVQQAPEYVDETVSLSSKTLFGFDKDNLRPEAQENLNALAQRL 114 Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 S + + + GHTD F + N LS RA L+ GV+ +IS + G Sbjct: 115 SNESVQTVRVEGHTD---FMGSEQYNQALSERRANVVANYLVGRGVASSKISAV-GLGES 170 Query: 319 R 319 + Sbjct: 171 Q 171 >gi|28900810|ref|NP_800465.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD 2210633] gi|28809256|dbj|BAC62298.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD 2210633] Length = 215 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 7/111 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S++ + ++ L I I+G+ A N LS RA + Sbjct: 93 LFDNDSALINQMFKNKIDELAAFLKKYPTTSIEIQGYASKV---GRAEYNLNLSRHRAEN 149 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQG 343 +L++ G+ DR+ I F +L ++ NRR+ V +QG Sbjct: 150 VRNLLIEKGIPGDRL-AIIAFGDTQLAEPGMDRVSHALNRRVTATVVGQQG 199 >gi|253720368|gb|ACT33424.1| outer membrane protein A precursor [Edwardsiella tarda] Length = 351 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + E L ++ L+ + + G+TD + N +LS Sbjct: 223 KSDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GSDQYNLKLS 279 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA--N-----RRIDIL 337 RA + L+ G+ D+I G + +A N RR+ I Sbjct: 280 KQRAQTVVDYLVSKGIPADKI-AARGMGKADPVTGSTCDNVKPRAALINCLAPDRRVVIE 338 Query: 338 VED 340 V+ Sbjct: 339 VKG 341 >gi|239758178|gb|ACN65406.2| outer membrane protein A precursor [Edwardsiella tarda] Length = 351 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + E L ++ L+ + + G+TD + N +LS Sbjct: 223 KSDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GSDQYNLKLS 279 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA--N-----RRIDIL 337 RA + L+ G+ D+I G + +A N RR+ I Sbjct: 280 KQRAQTVVDYLVSKGIPADKI-AARGMGKADPVTGSTCDNVKPRAALINCLAPDRRVVIE 338 Query: 338 VED 340 V+ Sbjct: 339 VKG 341 >gi|207092500|ref|ZP_03240287.1| flagellar motor protein MotB [Helicobacter pylori HPKX_438_AG0C1] Length = 260 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ ++ +F+ + S + ++ L++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSSLLFENATSDAINQDMMLYLERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|145688456|gb|ABP88969.1| outer membrane protein A [Edwardsiella tarda] Length = 351 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + E L ++ L+ + + G+TD + N +LS Sbjct: 223 KSDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GSDQYNLKLS 279 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA--N-----RRIDIL 337 RA + L+ G+ D+I G + +A N RR+ I Sbjct: 280 KQRAQTVVDYLVSKGIPADKI-AARGMGKADPVTGSTCDNVKPRAALINCLAPDRRVVIE 338 Query: 338 VED 340 V+ Sbjct: 339 VKG 341 >gi|192360106|ref|YP_001981638.1| OmpA family protein [Cellvibrio japonicus Ueda107] gi|190686271|gb|ACE83949.1| OmpA family protein [Cellvibrio japonicus Ueda107] Length = 576 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 31/249 (12%), Positives = 72/249 (28%), Gaps = 9/249 (3%) Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEK 153 + LS ++S L + + + + S Sbjct: 334 DPAQASLSPTAQRFESSTQLSDSVAKDEGGIGFIGLPYVRRAKLLSISSAEGSTAIMPTH 393 Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 + L + + E+ +R Q + + I + A Sbjct: 394 FTISTEDYPLARRLYFYLPQHNLHAEAEEFAKFSNSERGQGIVEDIGFISQNIKAGQPFA 453 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHT 272 + + + F S +++ L+++ + + ++ + + + G + Sbjct: 454 NNFYPPEMRDLTLRSQRLSINFRFKDGSDQLDSKSLSDLERLVKYVEVNAPKRLQLFGFS 513 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-- 330 D+ +N LSL RA L+K G+ G +SD Sbjct: 514 DSE---GDKHENLALSLRRAKVVEDHLIKRGIYP---LVAKGMGDEAPLASSDTEAGRHI 567 Query: 331 NRRIDILVE 339 NRR+++ + Sbjct: 568 NRRVEVWIL 576 >gi|33152784|ref|NP_874137.1| 18K peptidoglycan-associated outer membrane lipoprotein [Haemophilus ducreyi 35000HP] gi|1150840|gb|AAC44382.1| 18 kDa outer membrane protein [Haemophilus ducreyi] gi|33149008|gb|AAP96526.1| 18K peptidoglycan-associated outer membrane lipoprotein [Haemophilus ducreyi 35000HP] Length = 157 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 8/131 (6%) Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 A+ + + + NT F+ S E +L L S Sbjct: 28 DANANMNGDAMAVNQFGGMTTEDLQTRYNTVYFNFDSYAVEGEYRQLLDAHAAYLTSSNS 87 Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ GH D N L RA + L GV ++S +S + + + Sbjct: 88 KVTVTGHADER---GTPEYNIALGQRRADAVKNYLATKGV--SQVSTVS-YGEEKPSVLG 141 Query: 325 DPMN--SANRR 333 + NRR Sbjct: 142 HTEADYAKNRR 152 >gi|1332435|emb|CAA63037.1| outer membrane protein [Aeromonas salmonicida] gi|1588799|prf||2209353B major outer membrane protein OmpAII Length = 330 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 41/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPE---TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 + +F S PE + L + + G+TD N +LS Sbjct: 207 SDVLFAFGKSTLKPEGVAALNTLYHQNVDVQPKDGSAVVVGYTDRI---GSDAYNLKLSE 263 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDILV 338 RA + L+ G+ ++ I G + D + + +RR+++ V Sbjct: 264 ARARTVADFLVGKGLPAGKV-AIEGRGEASPVTGTQCDGIKAKAQLIACLAPDRRVEVRV 322 Query: 339 EDRQ 342 Q Sbjct: 323 TGIQ 326 >gi|269138621|ref|YP_003295321.1| outer membrane protein A [Edwardsiella tarda EIB202] gi|267984281|gb|ACY84110.1| outer membrane protein A [Edwardsiella tarda EIB202] gi|304558635|gb|ADM41299.1| Outer membrane protein A precursor [Edwardsiella tarda FL6-60] Length = 351 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + E L ++ L+ + + G+TD + N +LS Sbjct: 223 KSDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GSDQYNLKLS 279 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA--N-----RRIDIL 337 RA + L+ G+ D+I G + +A N RR+ I Sbjct: 280 KQRAQTVVDYLVSKGIPADKI-AARGMGKADPVTGSTCDNVKPRAALINCLAPDRRVVIE 338 Query: 338 VED 340 V+ Sbjct: 339 VKG 341 >gi|218708117|ref|YP_002415738.1| putative outer membrane protein [Vibrio splendidus LGP32] gi|218321136|emb|CAV17086.1| putative outer membrane protein, ompA/motB [Vibrio splendidus LGP32] Length = 213 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 14/154 (9%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN--------TPMFDKSSSI 243 +Q A + + L+ D + + +L FD Sbjct: 61 MQVNASTANQAIKNLIQDKLTQVSESADCAQYLLSRTKFVEGKLAREVLARVTFDFDDDE 120 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 ++ +L K+ L H T + G+TD+ + N L L R+ + L + G Sbjct: 121 LNQKSRYLLLKLIAKLEHQTPEFIVTGNTDS---KGSDSYNLSLGLQRSNAVVGYLKEQG 177 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 V+ + + +S +++ + NRR+D Sbjct: 178 VNIEDL-TVSSQGEANPVQSNETESGRHNNRRVD 210 >gi|70732179|ref|YP_261935.1| OmpA family outer membrane protein [Pseudomonas fluorescens Pf-5] gi|68346478|gb|AAY94084.1| outer membrane protein, OmpA family [Pseudomonas fluorescens Pf-5] Length = 304 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F LQ + + + V + GH+D N LS RA + Sbjct: 178 FPGGGIDLDARAKAKLQVMVDFIKADPTVNHVELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 + +G++E++I + + + NRR+++ +E Sbjct: 235 VMEFFKANGLAENQIV-VRFHGERYPLAPNTNAANRAKNRRVNVHLER 281 >gi|15639284|ref|NP_218733.1| outer membrane protein (tpn50) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025526|ref|YP_001933298.1| outer membrane protein TpN50 [Treponema pallidum subsp. pallidum SS14] gi|586110|sp|P38369|TPN50_TREPA RecName: Full=Outer membrane protein tpn50; AltName: Full=Antigen tpp57; Flags: Precursor gi|3322558|gb|AAC65272.1| outer membrane protein (tpn50) [Treponema pallidum subsp. pallidum str. Nichols] gi|7144504|gb|AAA20517.2| TpN50 precursor [Treponema pallidum] gi|189018101|gb|ACD70719.1| outer membrane protein TpN50 [Treponema pallidum subsp. pallidum SS14] gi|291059692|gb|ADD72427.1| outer membrane protein Tpn50 (Antigen tpp57) [Treponema pallidum subsp. pallidum str. Chicago] Length = 417 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 10/143 (6%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L + D + T G+ ISI FD S+ P L+KI E+L Sbjct: 282 ELQETLKDLHMPDAKVRETEEGVTISI----ENVQFDADSASLAPSEYEKLRKIAELLRA 337 Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + + GH +D R+S +RA + L + GV + G + Sbjct: 338 FPDRELLVSGHAARR---GSVQDQQRISEERADVVARYLQELGVVDAAHVYTRGCGAQQS 394 Query: 321 KIASDPMNSA--NRRIDILVEDR 341 +D + NRR++I + + Sbjct: 395 IAPNDSEDGRRKNRRVEITIISK 417 >gi|330889603|gb|EGH22264.1| OmpA family protein [Pseudomonas syringae pv. mori str. 301020] Length = 381 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 A+ + + + E + + V + Sbjct: 14 AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGTAAKAPAPSPAPAPVAKAAAAPAAPAA 73 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 ++ S+ + K D K + + + + + K+ Sbjct: 74 GAENSAPWYWPFGSKDNAQAKPDAVADKPADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + L A E + I+ F+ Sbjct: 134 PKALPMPDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190 Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 L P T+ + ++ +V+ + I GH D N ++S +RA S + Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 SG+ +R+S+ G + A+D + NRR++IL Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284 >gi|322515688|ref|ZP_08068661.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976] gi|322118233|gb|EFX90525.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976] Length = 360 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +F S P L + + ++ I + G+TD N +LS Sbjct: 237 SDVLFAFGKSNLKPAAAQALDAMQAEINNAGLANAAIQVNGYTDRI---GKEASNLKLSQ 293 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338 RA + ++ G S ++ + G+ D + +RR+++ V Sbjct: 294 RRAETVANYIVSKGASAANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 352 Query: 339 EDRQ 342 + + Sbjct: 353 QGSK 356 >gi|294624487|ref|ZP_06703170.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601217|gb|EFF45271.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 400 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 78/278 (28%), Gaps = 20/278 (7%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 K + + I+ + D +D++ L + Sbjct: 131 LKADGSGTANFEGGLVNVNADGSGTINATGDGGSGGAFIDVQSDGGGTYNGPAGLISLDG 190 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK--- 189 + + SE R G + + + + P + Sbjct: 191 KGAGTWNSEKSGLVDNRGDGSGTWNGPRGLVTINADGSGTWNGPDGLVQNHGDGTGTLGT 250 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + + K V T + I++ D+ +FD S + Sbjct: 251 PPREVRMPPLPKVPPAGRFPPLQKFVPPGTPCGYL-ITLNDR---ILFDFDKSDIRADAA 306 Query: 250 VVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 VL +G L T + + +RGHTDA + N LS RA + + Sbjct: 307 RVLDTLGAALTKVTAKDMQVRGHTDA---KGSDDYNQALSERRANAVLA--ALRARGAAQ 361 Query: 309 ISKISGFAHHRLKIAS------DP-MNSANRRIDILVE 339 + G + + +P NRR++I + Sbjct: 362 SANAKGDGESQPVAPNTVNRQDNPGGRQLNRRVEIFLR 399 >gi|294635647|ref|ZP_06714122.1| outer membrane protein A [Edwardsiella tarda ATCC 23685] gi|291090994|gb|EFE23555.1| outer membrane protein A [Edwardsiella tarda ATCC 23685] Length = 356 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + E L ++ L+ + + G+TD + N +LS Sbjct: 228 KSDVLFNFNKYTLKAEGRQALDQLYTQLSSMDPKDGSVVVLGYTDRI---GSDQYNLKLS 284 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA--N-----RRIDIL 337 RA + L+ G+ D+I+ G + +A N RR+ I Sbjct: 285 KQRAQTVVDYLVSKGIPADKITA-RGMGKADPVTGATCDNVKPRAALINCLAPDRRVVIE 343 Query: 338 VED 340 V+ Sbjct: 344 VKG 346 >gi|148979316|ref|ZP_01815448.1| hypothetical protein VSWAT3_05151 [Vibrionales bacterium SWAT-3] gi|145961856|gb|EDK27148.1| hypothetical protein VSWAT3_05151 [Vibrionales bacterium SWAT-3] Length = 322 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 37/108 (34%), Gaps = 5/108 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + L E + I+I GHTD ++ N RLS RA S Sbjct: 62 FAFDKYKLRDLDKINLDTFVEEIRGLKGRITIVGHTD---YKGSLEYNQRLSQRRAKSVA 118 Query: 297 QVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDRQ 342 L + ++ + +D + NRR I+ E+ Q Sbjct: 119 DYLKAYLDPTNYDWEVKHLGETQPLLLGKTDKDRAENRRAFIVFEEAQ 166 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 12/178 (6%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N + ++ +L K R ++ I + + + + Sbjct: 127 PTNYDWEVKHLGETQPLLLGKTDKDRAENRRAFIVFEEAQKYEEMPFCEPPKPERKVYMA 186 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I+ FD S+ PE + L L+ I + GHTD N Sbjct: 187 ITPH-------FDFDKSVLKPEDLTQLDDFASQLSGLQGNIMVAGHTDQ---AGSVSYNE 236 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 +L+ RA + + L + I ++ F + I S+ ++ NRR I+ ++ Sbjct: 237 KLAERRAETVVKYLKTKLNPKQFIWEVKSFGKLQPAINERSEKADALNRRAFIVFKES 294 >gi|329964410|ref|ZP_08301491.1| OmpA family protein [Bacteroides fluxus YIT 12057] gi|328525459|gb|EGF52507.1| OmpA family protein [Bacteroides fluxus YIT 12057] Length = 252 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 54/148 (36%), Gaps = 9/148 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + V+ V + +S +F +SS E L+++ Sbjct: 103 KMDKKAAEAAKIEGAQVEQVTDNNGLPAVKVSF---AAGILFAFNSSALSNEAKSSLREL 159 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++L I GHTD N ++S +RAYS L GVS + K+ G Sbjct: 160 AQILKEDPTTDIAIIGHTDKV---GTYEANMKVSKNRAYSVENYLQDCGVSPAQFKKVEG 216 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 + + NRR++I + + Sbjct: 217 VGYTE--YDDNLSADQNRRVEIYMYASE 242 >gi|284007877|emb|CBA73797.1| peptidoglycan-associated lipoprotein [Arsenophonus nasoniae] Length = 180 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 7/106 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 N F PE +L + L + I++ GH D + N L Sbjct: 74 SNNIVYFGFDKYDVTPEYAQLLDQHATFLRGNPSVKITVEGHADE---KGTPEYNIALGE 130 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 RA + L GV+ ++I I + + + + + NRR Sbjct: 131 RRANAVKMYLQSKGVNGEQI-AIVSYGKEKPAVLGHDESAYAKNRR 175 >gi|154493612|ref|ZP_02032932.1| hypothetical protein PARMER_02952 [Parabacteroides merdae ATCC 43184] gi|154086822|gb|EDN85867.1| hypothetical protein PARMER_02952 [Parabacteroides merdae ATCC 43184] Length = 662 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 34/147 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 IS +D + PE+ L ++ ++L + I + HTD + + N Sbjct: 516 ISKPVVIENIFYDFDKATLRPESKKALDEMIKILNDNPNVTIELGAHTDR---KGSEQYN 572 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD------------------- 325 RL+ RA S L+ G+++DR+ G+ K + Sbjct: 573 ERLAQRRAQSVVDYLIAGGIAQDRLEA-KGYGESVPKAINKRMAKNYDFLNEGDVLTEEF 631 Query: 326 ----PMNSA------NRRIDILVEDRQ 342 NRR + V Sbjct: 632 IERMTPEQQEIADQINRRTEFKVLRTN 658 >gi|229515018|ref|ZP_04404478.1| outer membrane protein [Vibrio cholerae TMA 21] gi|229347723|gb|EEO12682.1| outer membrane protein [Vibrio cholerae TMA 21] Length = 212 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 7/161 (4%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + LQD + L D + + S Q+ +F SS Sbjct: 42 ANQIADLQDDDRDGVINARDLCPDTPKGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIE 101 Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P + ++++ E L I ++G+ A N LS R+ + L++ GV Sbjct: 102 PAFLTQIRQMAEFLQTYPSTSIELQGYASKV---GSAEHNLVLSKQRSEAVRDQLLRYGV 158 Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 + +R++ I G+ L++ D ++ NRR+ V +G Sbjct: 159 APERVN-IVGYGDSVLEVEGTDDVSHARNRRVTATVVGYKG 198 >gi|212704937|ref|ZP_03313065.1| hypothetical protein DESPIG_03004 [Desulfovibrio piger ATCC 29098] gi|212671601|gb|EEB32084.1| hypothetical protein DESPIG_03004 [Desulfovibrio piger ATCC 29098] Length = 155 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 8/132 (6%) Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 + V + I I +F P+ +L E++ Sbjct: 21 AKKTQDATGDVDDMSPEMRAAIQQITD-GRVLFAFDKFDIQPQYKDMLTAKAELMKKYPS 79 Query: 265 VI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI- 322 + I G+ D N L RA +AY +++ GV+ ++ IS + + + Sbjct: 80 IRVRIEGNCDER---GTQEYNLALGERRARAAYDYMVRLGVNPGQLEMIS-YGKEKPVVQ 135 Query: 323 -ASDPMNSANRR 333 + + + + NRR Sbjct: 136 GSGESVWAQNRR 147 >gi|229587133|ref|YP_002845634.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia africae ESF-5] gi|228022183|gb|ACP53891.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia africae ESF-5] Length = 155 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P+ L++ L+ E +++ GH D N L RA +A Sbjct: 53 FAFDSSALSPKAKEELERQACWLSKHPEVKVTVEGHCDER---GTKEYNLGLGERRAAAA 109 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337 + L+ G+ +R++ IS + R + + + NRR + ++ Sbjct: 110 QKFLVHKGIDHNRLNTIS-YGKERPAMMGNTEEAFAYNRRAVTVV 153 >gi|153836901|ref|ZP_01989568.1| outer membrane protein [Vibrio parahaemolyticus AQ3810] gi|260362576|ref|ZP_05775496.1| outer membrane protein [Vibrio parahaemolyticus K5030] gi|260878366|ref|ZP_05890721.1| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|260896123|ref|ZP_05904619.1| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|260901510|ref|ZP_05909905.1| outer membrane protein [Vibrio parahaemolyticus AQ4037] gi|149749859|gb|EDM60604.1| outer membrane protein [Vibrio parahaemolyticus AQ3810] gi|308088130|gb|EFO37825.1| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|308090275|gb|EFO39970.1| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|308107674|gb|EFO45214.1| outer membrane protein [Vibrio parahaemolyticus AQ4037] gi|308115286|gb|EFO52826.1| outer membrane protein [Vibrio parahaemolyticus K5030] Length = 205 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 7/111 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S++ + ++ L I I+G+ A N LS RA + Sbjct: 83 LFDNDSALINQMFKNKIDELAAFLKKYPTTSIEIQGYASKV---GRAEYNLNLSRHRAEN 139 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQG 343 +L++ G+ DR+ I F +L ++ NRR+ V +QG Sbjct: 140 VRNLLIEKGIPGDRL-AIIAFGDTQLAEPGMDRVSHALNRRVTATVVGQQG 189 >gi|8928233|sp|Q9S3P9|MOTY_VIBAN RecName: Full=Sodium-type flagellar protein motY; AltName: Full=Polar flagellum motor protein; Flags: Precursor gi|5802659|gb|AAD51752.1|AF176946_1 polar flagellum motor protein [Listonella anguillarum] Length = 293 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 10/154 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 + Q ++I LS ++ V + + S D T + +D+ + + Sbjct: 140 QDWQSRDQRIEVALSSVLFQE-KYNVFSDCVSNLLTYSFEDISFTILHYDRDNVQLNKAS 198 Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L +I + + ++ ++ + +TD+ R ++ LS RA G+ E Sbjct: 199 QKRLAQIADYIRYNQDIDLVLVSTYTDSVDSRGVS---QDLSERRAEVLRDYFKSLGLPE 255 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 DRI ++ G+ R + NRR+ I + Sbjct: 256 DRI-QVQGYGKRRPIADNASPIGKDKNRRVVISL 288 >gi|117617688|ref|YP_858093.1| peptidoglycan-associated lipoprotein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|330828308|ref|YP_004391260.1| peptidoglycan-associated lipoprotein [Aeromonas veronii B565] gi|117559095|gb|ABK36043.1| peptidoglycan-associated lipoprotein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|328803444|gb|AEB48643.1| Peptidoglycan-associated lipoprotein [Aeromonas veronii B565] Length = 174 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + N F + +L L V I GH D N L Sbjct: 68 RDNVIYFPFDGYDIQGQYADLLDAHASYLRERPSVKVLIEGHADER---GTPEYNIALGE 124 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV +++S +S + + S + + NRR ++ Sbjct: 125 RRAKAVAKYLQTLGVQAEQLSIVS-YGEEKPLDMSHTEDAFAKNRRAVLV 173 >gi|294792911|ref|ZP_06758057.1| outer membrane protein OprF [Veillonella sp. 6_1_27] gi|294455856|gb|EFG24220.1| outer membrane protein OprF [Veillonella sp. 6_1_27] Length = 345 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + L + + + G+ D + N LS R Sbjct: 243 FDSDQDVARADQYPNLTAAVNAANQYSQDQVKLMGNADTD---ANPQYNIALSERRVQHV 299 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 Q L+ GVS DR+ I+ + + + NRR+D+ + Sbjct: 300 AQYLVNHGVSADRLIGIA-NGDVKPVATNSTAAGKAENRRVDVYIHR 345 >gi|189353654|ref|YP_001949281.1| putative OmpA family transmembrane protein [Burkholderia multivorans ATCC 17616] gi|189337676|dbj|BAG46745.1| putative OmpA family transmembrane protein [Burkholderia multivorans ATCC 17616] Length = 171 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD P+ ++++IG L + + + + G+TD + LS R Sbjct: 64 GPILFDFDRYNLKPDVRRIVERIGRTLHSAGIDGVRVYGYTDDE---GTDGYDLELSRRR 120 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A L+ G+ RI I G H + + NRR I+V R Sbjct: 121 AEVVAIELVDVGLDARRI-AIVGRGKHDPVGDNRMPVGRAQNRRAAIVVSPR 171 >gi|88658586|ref|YP_507279.1| OmpA family protein [Ehrlichia chaffeensis str. Arkansas] gi|88600043|gb|ABD45512.1| OmpA family protein [Ehrlichia chaffeensis str. Arkansas] Length = 175 Score = 77.3 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F + +L+K+ + + I I GHTD N L R Sbjct: 42 EKIYFGFGKATIEDSDKTILEKVMQKAEEYPDTNIIIVGHTDTR---GTDEYNLELGKQR 98 Query: 292 AYSAYQV-LMKSGVSEDRISKISGFAHHRL---KIASDPMNS-----ANRRIDILVED 340 A + L ++ EDRI I +++P + NRR+ I + D Sbjct: 99 ANAVKDFILERNKSLEDRII-IESKGKSEPAVLVYSNNPEEAEYAHTKNRRVVITLTD 155 >gi|68171722|ref|ZP_00545076.1| OmpA/MotB [Ehrlichia chaffeensis str. Sapulpa] gi|67998855|gb|EAM85553.1| OmpA/MotB [Ehrlichia chaffeensis str. Sapulpa] Length = 175 Score = 77.3 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F + +L+K+ + + I I GHTD N L R Sbjct: 42 EKIYFGFGKATIEDSDKTILEKVMQKAEEYPDTNIIIVGHTDTR---GTDEYNLELGKQR 98 Query: 292 AYSAYQV-LMKSGVSEDRISKISGFAHHRL---KIASDPMNS-----ANRRIDILVED 340 A + L ++ EDRI I +++P + NRR+ I + D Sbjct: 99 ANAVKDFILERNKSLEDRII-IESKGKSEPAVLVYSNNPEEAEYAHTKNRRVVITLTD 155 >gi|269962895|ref|ZP_06177235.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832449|gb|EEZ86568.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 301 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 79/292 (27%), Gaps = 33/292 (11%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + I + P + + ++ +++ + +D I + + Sbjct: 34 FADVNVSKF-LISECLAPQREIHIAVAEHFDFDKSIIREADAVSLDAFIRDIQGLSGRIT 92 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 +G T+ K + + +E E + K Sbjct: 93 IVGHTDFKG-------------SDEYNEKLSMRRAESVEAYLQQQLDPEQYDWEVKHFGE 139 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 P + A +R + ++ + T Sbjct: 140 SQPLALGKSDQARAENRRAYVMFEEAKKYEEMPFCEPPKPERKIYMAMTPH--------- 190 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S PE + L L I + GHTD N L+ RA Sbjct: 191 ---FDFDKSELKPEDLSQLDDFIAKLQGLEGSIMVAGHTDQV---GSLSYNEELAERRAQ 244 Query: 294 SAYQVLMKSGVSEDRIS-KISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 + L K+ + + ++ F + I + + NRR I+ ++ + Sbjct: 245 TVVAYL-KTKLDPSQFVWEVKAFGELQPVINEESPEANALNRRAFIVFKESE 295 >gi|260575964|ref|ZP_05843959.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] gi|259021890|gb|EEW25191.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] Length = 650 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 37/115 (32%), Gaps = 7/115 (6%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I+ F S+ L + EVL + + I GHTDA N Sbjct: 492 INTALAVQKITFAPGSAEIAASAGKTLDALAEVLIKCPDLRLEIGGHTDAQ---GSTEGN 548 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 LS RA + L ++ + G+ + + NRRI+ Sbjct: 549 RALSQARAEAVLLGLQGRRAPVAGLTAV-GYGEDKPLADNGTDEGREANRRIEFT 602 >gi|225620337|ref|YP_002721594.1| putative flagellar motor protein [Brachyspira hyodysenteriae WA1] gi|225215156|gb|ACN83890.1| putative flagellar motor protein [Brachyspira hyodysenteriae WA1] Length = 266 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 18/156 (11%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP--LPETIVVLQKIG 256 I S L ++ + V E G +IS+ + F+ +S+ + K+ Sbjct: 106 IDKATSVLESEIKSRKVRIEEDERGFIISLGADQY---FESASTNLVDNQNNVETFIKLA 162 Query: 257 EVLAHSTEVISIRGHTDASPF------RNIARDNWRLSLDRAYSAYQVL----MKSGVSE 306 VL+ + I GHTD+ +NW LS RA + + + Sbjct: 163 SVLSGLPNDVRIEGHTDSGSIIPGSITEQKFGNNWGLSSARAMVILEKIFENDQAGKLDR 222 Query: 307 DRISKISGFAHHRLKIASD--PMNSANRRIDILVED 340 ++ I+G+A R ++D + NRR+DI+V Sbjct: 223 NK-YSIAGYADTRPVASNDLPDGRALNRRVDIVVVR 257 >gi|117617594|ref|YP_855822.1| major outer membrane protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559001|gb|ABK35949.1| major outer membrane protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 344 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 41/125 (32%), Gaps = 18/125 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 + +F PE + L + + + + G+TD N +LS Sbjct: 220 NSDVLFAFGKDSLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLS 276 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDIL 337 RA + L+ G++ ++ + G + + +RR+++ Sbjct: 277 EARARTVANFLVSKGMAASKV-AVEGRGEANPVTGTKCNGVKAKAQLISCLAPDRRVEVR 335 Query: 338 VEDRQ 342 V Q Sbjct: 336 VSGVQ 340 >gi|58422903|gb|AAW73251.1| OmpA [Serratia sp. MF 416] Length = 225 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 7/92 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 + +F + + PE L ++ L+ + + G TDA A N RLS Sbjct: 116 SDVLFAFNKATLKPEGQHALDQLYTQLSSLDPKDGSVVVLGFTDAV---GSAEYNLRLSE 172 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 RA S L+ G+ D+IS G Sbjct: 173 QRAQSVVDYLISKGIPSDKISA-RGMGKANPI 203 >gi|293390286|ref|ZP_06634620.1| OmpA-like outer membrane protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950820|gb|EFE00939.1| OmpA-like outer membrane protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 346 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 ++ + F + P+ L I +A + + G+TD Sbjct: 220 VVRKTFSLNSDVTFAFGKANLKPQAQNTLDGIYGEIAQVNNANVQVAGYTDRI---GSDA 276 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SAN 331 N +LS RA + L+ GVS+ IS +G S + + Sbjct: 277 YNQKLSQRRAETVANYLVSKGVSQQAISA-TGHGKANPVTGSKCDAVKGRKALIACLADD 335 Query: 332 RRIDILVEDRQ 342 RR++I V + Sbjct: 336 RRVEIAVNGTK 346 >gi|114561619|ref|YP_749132.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114332912|gb|ABI70294.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400] Length = 200 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 61/180 (33%), Gaps = 17/180 (9%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 S+N + R + + S+ + V + + R + Sbjct: 16 SVNDIVESNASTQQNFDLADSDRDGVIMARERCASTLIGAAVDNYGCGSIKDINERQDLK 75 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 I +F +S + P+ ++++ V+ +I GHT N Sbjct: 76 I---------LFSNNSVVIEPQYYNQIERVANVMTTYPTTKVTIEGHTSKR---GSYELN 123 Query: 285 WRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 LS RA + +VL + G+ R++ +G++ R S + NRR+ V Sbjct: 124 LALSQKRAKAVIEVLENTFGIDPSRLNA-TGYSFDRPIDNSGTPEAEERNRRVVAEVTAD 182 >gi|332665208|ref|YP_004447996.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332334022|gb|AEE51123.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 291 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 78/201 (38%), Gaps = 10/201 (4%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + D + + L K + L ++ + + L ++ + K+ L+ L + I+ Sbjct: 78 DELEEELDKAQNQALTKQSSLGDALKAKNDQILSLENQIAAIRGALKQELETLQQ-IAKE 136 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAH 261 +A V E I++++ + +F S+ P L+ IG +L Sbjct: 137 FQDSLAKFPVAQYSVEVRNGKIVLALTESL---LFKSGVSNRIEPNGQAALKAIGTLLNA 193 Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 + + I + GHTD D+W + RA + + L+ + +R+ G Sbjct: 194 NPVLLIQVLGHTDNQAASRKNLDSWDFTSLRAATVVRSLIDTHDLGANRVISG-GRGEFD 252 Query: 320 LKIASDPMNS--ANRRIDILV 338 +++ NRR+++ + Sbjct: 253 PITSNETSEGQSRNRRVELSL 273 >gi|161520167|ref|YP_001583594.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC 17616] gi|160344217|gb|ABX17302.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616] Length = 185 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD P+ ++++IG L + + + + G+TD + LS R Sbjct: 78 GPILFDFDRYNLKPDVRRIVERIGRTLHSAGIDGVRVYGYTDDE---GTDGYDLELSRRR 134 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A L+ G+ RI I G H + + NRR I+V R Sbjct: 135 AEVVAIELVDVGLDARRI-AIVGRGKHDPVGDNRMPVGRAQNRRAAIVVSPR 185 >gi|187927781|ref|YP_001898268.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12J] gi|187724671|gb|ACD25836.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12J] Length = 173 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E +L + L + I+G+TD + N L RA + Sbjct: 73 FDFDSYSVKSEYQGLLGQHSRYLQSHNQRKVLIQGNTDER---GTSEYNLALGQKRAEAV 129 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV + ++ +S + + + + NRR DI+ Sbjct: 130 RRALSSMGVPDSQMEAVS-LGKEKPQATGHDEDSWAQNRRADIV 172 >gi|217032506|ref|ZP_03437997.1| hypothetical protein HPB128_180g5 [Helicobacter pylori B128] gi|216945784|gb|EEC24407.1| hypothetical protein HPB128_180g5 [Helicobacter pylori B128] Length = 247 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 85/211 (40%), Gaps = 19/211 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G S++ ++ +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDILVEDR 341 S + +D N R++I +R Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIFFSNR 235 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|237859127|gb|ACR23739.1| outer membrane lipoprotein p6 [Avibacterium paragallinarum] Length = 150 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWR 286 + + NT F E +L L A + + G+TD N Sbjct: 41 LQQRYNTVYFGFDKYNIEGEYQQILDAHAAYLTATPASKVLVEGNTDER---GTPEYNIA 97 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 L RA + L GV ++S +S + + + NRR Sbjct: 98 LGQRRADAVANYLSAKGVQATQLSTVS-YGEEKPTELGHTEAAYAKNRR 145 >gi|94676590|ref|YP_588572.1| peptidoglycan-associated lipoprotein precursor [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219740|gb|ABF13899.1| peptidoglycan-associated lipoprotein precursor [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 211 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 +I +N F I +L + + L + + I GH D N Sbjct: 102 MISDQNVIYFTLDKYKIKSCFIPMLDEHAQFLRSNPSAQVIIEGHADER---GTPEYNIA 158 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 L RA + + L GV ++I IS + + + + + NRR ++ Sbjct: 159 LGERRANAVKRYLQSQGVCSEQIKIIS-YGKEKPAVFGHNKAAYAKNRRTVLV 210 >gi|296136887|ref|YP_003644129.1| peptidoglycan-associated lipoprotein [Thiomonas intermedia K12] gi|295797009|gb|ADG31799.1| peptidoglycan-associated lipoprotein [Thiomonas intermedia K12] Length = 180 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + F +S + VL L + + ++G+TDA N L Sbjct: 73 PKSVYFAFNSYTVESQYTPVLNANATYLTQHPQAHVQLQGNTDAR---GSREYNLALGQK 129 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + + GV ++ IS + + K + + NRR+DI+ Sbjct: 130 RADAVMKGMELLGVKPSQMEAIS-YGKEKPKALGNTEADYAENRRVDIV 177 >gi|254253147|ref|ZP_04946465.1| Outer membrane protein [Burkholderia dolosa AUO158] gi|124895756|gb|EAY69636.1| Outer membrane protein [Burkholderia dolosa AUO158] Length = 182 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E +LQ+ + L + + I+G+TD + N L RA + Sbjct: 80 FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 136 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV++ ++ +S + + + NRR D++ Sbjct: 137 RRALALLGVADSQMEAVS-LGKEKPLATGHDEASWAQNRRADLV 179 >gi|165975761|ref|YP_001651354.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149578|ref|YP_001968103.1| outer membrane protein precursor PalA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303249536|ref|ZP_07335743.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252546|ref|ZP_07338709.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307245117|ref|ZP_07527210.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247296|ref|ZP_07529344.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251837|ref|ZP_07533738.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307254073|ref|ZP_07535920.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256332|ref|ZP_07538115.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307258528|ref|ZP_07540265.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260771|ref|ZP_07542458.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262897|ref|ZP_07544521.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|322514835|ref|ZP_08067854.1| peptidoglycan-associated lipoprotein [Actinobacillus ureae ATCC 25976] gi|1405436|emb|CAA61413.1| PALA outer membrane protein precursor [Actinobacillus pleuropneumoniae] gi|165875862|gb|ABY68910.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914709|gb|ACE60961.1| outer membrane protein precursor PalA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648514|gb|EFL78707.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651610|gb|EFL81759.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306854006|gb|EFM86218.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856140|gb|EFM88295.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306860529|gb|EFM92541.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862998|gb|EFM94945.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865158|gb|EFM97058.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306867432|gb|EFM99283.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869497|gb|EFN01287.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871802|gb|EFN03522.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|322119217|gb|EFX91358.1| peptidoglycan-associated lipoprotein [Actinobacillus ureae ATCC 25976] Length = 152 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 8/108 (7%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 + + NT F S E +L L + +++ GH D N L Sbjct: 46 LQTRYNTVYFGFDSYAVEGEYQQLLDAHAAYLTSANGKVTVAGHADER---GTPEYNIAL 102 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 RA + L G +++S +S + + + + NRR Sbjct: 103 GQRRADAVKNYLATKG--ANQVSTVS-YGEEKPAVLGHTEADYAKNRR 147 >gi|32033646|ref|ZP_00133957.1| COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207788|ref|YP_001053013.1| outer membrane protein precursor PalA [Actinobacillus pleuropneumoniae L20] gi|307249520|ref|ZP_07531507.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|126096580|gb|ABN73408.1| outer membrane protein precursor PalA [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306858375|gb|EFM90444.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 156 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 8/108 (7%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 + + NT F S E +L L + +++ GH D N L Sbjct: 50 LQTRYNTVYFGFDSYAVEGEYQQLLDAHAAYLTSANGKVTVAGHADER---GTPEYNIAL 106 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 RA + L G +++S +S + + + + NRR Sbjct: 107 GQRRADAVKNYLATKG--ANQVSTVS-YGEEKPAVLGHTEADYAKNRR 151 >gi|284039792|ref|YP_003389722.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283819085|gb|ADB40923.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 813 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 81/296 (27%), Gaps = 19/296 (6%) Query: 53 IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 +++ + + +E + + + L I I + Sbjct: 527 LMSDANGFLRICLEASNSFTFQASRDGYINSMVGFTTRSLTDDQPSQLEIGL-IKPTVAE 585 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 I +N + + + + + ++ C T E + Sbjct: 586 DTIAVSNNNLLLTATPLTHSRVQGVIMGARDRKPIEGVTVRIRNECDRTQREYVTGPDGR 645 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 Y + K +I + + + + I Sbjct: 646 YMFDVNEGCDYTLVASKPAFGTNRNRIRRLPKKTKPKAVSADLRMLSVGDVVTI------ 699 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + +D S + L K+ + +I IR HTD+ A N LSL R Sbjct: 700 DNIYYDLDHSSLREDAARELDKVVATMRKYPSLIIEIRSHTDSR---GDAERNKALSLQR 756 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 A + L G+S R+ G +L ++ + NRR + V + Sbjct: 757 AKAVAAYLASKGISRKRM-ATLGMGESQLVNNCTDGVICTEAEHQRNRRTEFRVVE 811 >gi|268679162|ref|YP_003303593.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268617193|gb|ACZ11558.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 166 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 9/123 (7%) Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFR 278 ++ S+ T FD + + + I + G+ D Sbjct: 47 QKLIASLEANSKTIYFDFDKYNVRKDQQTNIDANAALFNSAEAKNFSIKVEGNCDEF--- 103 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 N+ L L RA S L+ G++ DR++ +S + + + + NRR + Sbjct: 104 GTDEYNYALGLKRAKSVKDGLVAKGMNADRLTVVS-YGESNPAVNEHNKDAWAKNRRAEF 162 Query: 337 LVE 339 V Sbjct: 163 KVL 165 >gi|254453865|ref|ZP_05067302.1| OmpA domain protein [Octadecabacter antarcticus 238] gi|198268271|gb|EDY92541.1| OmpA domain protein [Octadecabacter antarcticus 238] Length = 311 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 12/135 (8%) Query: 216 LFETTRTGILISIIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRG 270 T + S+ DQ + F+ S+ LQ + + L + + + G Sbjct: 181 EVATITGDLAQSLEDQGRFILSGLVFETGSAQLGDAIFGSLQYLADYLIANPDRTVALVG 240 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS 329 HTD F N LS RA S + L+ + ++ G + ++ Sbjct: 241 HTD---FFGSLDGNIALSKRRAGSVLERLVTTYDIPRHQLDA-QGMGYLSPVASNLTEEG 296 Query: 330 A--NRRIDILVEDRQ 342 NRR+++++ Q Sbjct: 297 REANRRVEVIITSTQ 311 >gi|303256827|ref|ZP_07342841.1| outer membrane protein A (Outer membrane protein II) [Burkholderiales bacterium 1_1_47] gi|302860318|gb|EFL83395.1| outer membrane protein A (Outer membrane protein II) [Burkholderiales bacterium 1_1_47] Length = 221 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 23/160 (14%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 ++ L + + + +++ +F + ++ PE I L ++ Sbjct: 67 LAEAQGALGQNCQCDTDIIKCEAGAERVTLSADT---LFAFNKAVLKPEGIAKLTELTSR 123 Query: 259 LAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 ++ + +V+ I G+ D A N +LS RA + L + GV RI G Sbjct: 124 MSGLTLDVVMINGYADRI---GGAAYNQKLSQRRADAVKTFLAEHGVPAARIHA-EGKGQ 179 Query: 318 HRLKI--ASDPMNSA-------------NRRIDILVEDRQ 342 + + NRR I V+ + Sbjct: 180 ADPVVNCPNPSAKGEIKTFKQLIECLQPNRRAVIEVKGTR 219 >gi|90409178|ref|ZP_01217293.1| outer membrane protein OmpA [Psychromonas sp. CNPT3] gi|90309723|gb|EAS37893.1| outer membrane protein OmpA [Psychromonas sp. CNPT3] Length = 326 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 14/134 (10%) Query: 212 VKGVLFETTRTGILISIIDQRNTP-----MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 + + ++ I Q P FD SS LP +L +I + LA ++ Sbjct: 194 KDIIPITQPKETVVSEIKKQPKLPKNIILFFDFDSSEILP--TPLLHQITDQLAKFPKIN 251 Query: 267 S-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 I HTD+ N +L+ RA + + ++++RI+ + ++ Sbjct: 252 ISIIAHTDSE---GSDLYNDKLAAKRALEVSKYFLHKNINKNRIN-VLSHGERLPTHDNE 307 Query: 326 P--MNSANRRIDIL 337 + NRR++I Sbjct: 308 TKKGRAKNRRVEIT 321 >gi|71282605|ref|YP_268470.1| peptidoglycan-associated lipoprotein [Colwellia psychrerythraea 34H] gi|71148345|gb|AAZ28818.1| peptidoglycan-associated lipoprotein [Colwellia psychrerythraea 34H] Length = 184 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 8/162 (4%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 ++ + ++ A+ + + E + L + + FD Sbjct: 27 DTDEQSQVDTNAQITKNAEDAQKAQEAVQVTAAKRAAEIEEQKRQELAQLR-SEHIIYFD 85 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S + +L + L +++V I GH D N L RA S Sbjct: 86 FDVSNVNDQFSAILDAHAKFLNANSDVKVLIEGHADER---GTPEYNIALGERRAKSVVT 142 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 L GV+ +++ +S + + + N+ NRR ++ Sbjct: 143 YLENMGVAAGQLTVVS-YGEEKPMVKDRSENAFSKNRRAVLV 183 >gi|297538146|ref|YP_003673915.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301] gi|297257493|gb|ADI29338.1| OmpA/MotB domain protein [Methylotenera sp. 301] Length = 378 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 36/112 (32%), Gaps = 14/112 (12%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F + +L + + E + + GHTD N +LS RA Sbjct: 261 LFGFDKAKLQDGAKPILDDTVAKIKANPELKTVIVTGHTDRI---GSTAYNQKLSEKRAS 317 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMN------SANRRIDIL 337 + L+ GV I+ + G A + NRR+ I Sbjct: 318 IVKEYLVSQGVDAGIITSV-GKGESEPVEACKGVTGKKLISCLAPNRRVVIT 368 >gi|283782254|ref|YP_003373009.1| OmpA/MotB domain-containing protein [Pirellula staleyi DSM 6068] gi|283440707|gb|ADB19149.1| OmpA/MotB domain protein [Pirellula staleyi DSM 6068] Length = 282 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 102/283 (36%), Gaps = 10/283 (3%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 + + +F L AS F + + Q + + S L + + Sbjct: 2 RRLLDHFRSTRNLLAAASLVCFLACGCKQGAFQPPAGTAQSNVFQQQSTALNSQVQDLTR 61 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + +L+ N L +Q + +++ L K S KE + K+ Sbjct: 62 RVGQLDLNNADLH--RQLAQADQLKQQYADQVSLLQKQLGDMASRLKETQTAKAEIDKQV 119 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + + + +S+ + ++ + G+ + I I + + +F S Sbjct: 120 QTLQASTRFRGGASIQANSSATNSLSTVQIPGIDVRQDGSVIRIELPADK---LFVTGSL 176 Query: 243 IPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 P E ++ ++ + S + I I GHTD + N A + L+ +++ + +Q L+ Sbjct: 177 QPTLEAQRIIDEVATAIIRSYPRQRIVIEGHTDNAQAGNPAGAHL-LAYNQSQAVFQQLV 235 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 + R I+ + ++ + NRRI+I+V Sbjct: 236 QRNSIPVRQLAIAAMGENHPLASNGTEQGRAKNRRIEIVVYPD 278 >gi|46202758|ref|ZP_00052660.2| COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Magnetospirillum magnetotacticum MS-1] Length = 382 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ P+ + L++ A +S+ G+TD A N RLS RA + Sbjct: 152 FDLGSAKLSPQALQTLKEAAAAQAQMHAPLVSVAGYTDTL---GAADANLRLSRQRADAV 208 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 L+K GV+ I + +L +A+ + + NRR++I + Sbjct: 209 TAELVKLGVNPA-IISENALGETKLAVATGDNKAEAKNRRVEITL 252 Score = 43.0 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 84/274 (30%), Gaps = 18/274 (6%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +P +T + E ++ + +I+ + + + T ++ + + Sbjct: 118 SPCRTTFLTHEPILKKAVGTTEVAADTRRSFTINFDLGSAKLSPQALQTLKEAAAAQAQM 177 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + +S + ++ + + T + E LA+ Sbjct: 178 HAPLVSVAGYTDTLGAADANLRLSRQRADAVTAELVKLGVNPAIISENALGETKLAVATG 237 Query: 190 K-RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT-PMFDKSSSIPLPE 247 + + +++ TL+G + G F SS Sbjct: 238 DNKAEAKNRRVEITLAGPTWAHGRYGGYAYGDHGHGWGGYYGHNGFAVFFLPGSSRLGSA 297 Query: 248 TIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 I L+++ + +++ G TD + A N RLS +RA + + K G S Sbjct: 298 DIARLKQVVAAQKTLKPKTVTVVGFTDQT---GSAATNARLSNERAQAVAAEIAKLGGST 354 Query: 307 DRISKISGF---AHHRLKIASDPMNSANRRIDIL 337 + G + + RR++IL Sbjct: 355 TSVEARPGEVWGGAY---------DGRARRVEIL 379 >gi|330502362|ref|YP_004379231.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] gi|328916648|gb|AEB57479.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] Length = 313 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F P L I + + + I GH D N LS RA + Sbjct: 183 FPGGGIDLDPMAKAKLDIILDFVKADPTINSFQIDGHADN---SGNRLTNRDLSRRRALA 239 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L+ G+ ++I + + ++ + NRR + ++ Sbjct: 240 VQEYLVAGGIPVEQI-TMRFHGERYPLVPNNNEANRAKNRRATLRLDR 286 >gi|310823157|ref|YP_003955515.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] gi|309396229|gb|ADO73688.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] Length = 171 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 40/122 (32%), Gaps = 17/122 (13%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----------STEVISIRGHTDASPFRNI 280 ++N F + + L+ + L + GHTD+ Sbjct: 53 RKNQCSFKTGTDVLEAGCDQKLKNLTAALVEAKKQLDAGGVKNYQFEVSGHTDS---SGD 109 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN--SANRRIDIL 337 A N LS RA + L+ G+ I + G + + D + NRR +I Sbjct: 110 AAKNKALSEKRAAVIVKELVSRGIPRAEILAV-GRGSEQPLVKPDDTAAKKAKNRRYEIQ 168 Query: 338 VE 339 V Sbjct: 169 VR 170 >gi|193885262|pdb|2ZF8|A Chain A, Crystal Structure Of Moty Length = 278 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 10/158 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 + Q ++I LS ++ N + + S D T + +++ + Sbjct: 119 QDWQSRDQRIEVALSSVLFQN-KYNAFSDCISNLLKYSFEDIAFTILHYERQGDQLTKAS 177 Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L +I + + H+ ++ + +TD++ ++ ++ LS RA S G+ E Sbjct: 178 KKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQS---LSERRAESLRDYFQSLGLPE 234 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 DRI ++ G+ R + NRR+ I + Q Sbjct: 235 DRI-QVQGYGKRRPIADNGSPIGKDKNRRVVISLGRTQ 271 >gi|153826170|ref|ZP_01978837.1| outer membrane protein, putative [Vibrio cholerae MZO-2] gi|149740111|gb|EDM54276.1| outer membrane protein, putative [Vibrio cholerae MZO-2] Length = 212 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 7/161 (4%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + LQD + L D + + + Q+ +F SS Sbjct: 42 ANQIADLQDDDRDGVINARDLCPDTPKGSEIDNDGCGTFVKASQMQQLHILFANDSSSIE 101 Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P + ++++ E L I ++G+ A N LS R+ + L++ GV Sbjct: 102 PAFLTQIRQMAEFLQTYPSTSIELQGYASKV---GSAEHNLALSKQRSEAVRDQLLRYGV 158 Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 + +R++ I G+ L++ D ++ NRR+ V +G Sbjct: 159 APERVN-IVGYGDSVLEVEGTDDVSHARNRRVTATVVGYKG 198 >gi|145640334|ref|ZP_01795918.1| scaffold protein [Haemophilus influenzae R3021] gi|145274920|gb|EDK14782.1| scaffold protein [Haemophilus influenzae 22.4-21] Length = 153 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 7/135 (5%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 ++ +T + + + NT F E + +L L Sbjct: 18 AACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 77 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + + G+TD N L RA + L GV ++ +S + + Sbjct: 78 TPAAKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLTGKGVDAGKLGTVS-YGEEKP 133 Query: 321 KIASDPMNS--ANRR 333 + + NRR Sbjct: 134 AVLGHDEAAYSKNRR 148 >gi|328675505|gb|AEB28180.1| Outer membrane lipoprotein omp16 precursor [Francisella cf. novicida 3523] Length = 417 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286 FD S + VL K+ L T +I+G+ TD N R Sbjct: 70 FDADSYTLNAQAKEVLDKLFAYLKLTDTTRFTIKGYAGKVESKILTDQKILT---DYNIR 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS +RA S + L+ G+ I + +D + N+R++I +E R Sbjct: 127 LSKNRASSVEEYLVNKGLDSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLESR 183 >gi|307699909|ref|ZP_07636960.1| OmpA family protein [Mobiluncus mulieris FB024-16] gi|307614947|gb|EFN94165.1| OmpA family protein [Mobiluncus mulieris FB024-16] Length = 325 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 7/187 (3%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 ++ + + E+I AM L + +++ L+ + Sbjct: 77 SGSTSAVNLGSMMGNDTTTAAGQPERIQAMAEASHLNQIKQQVEQALAAAGQTGA---LQ 133 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 T G+++ ++ F + P VL + VL + E ++I G+ D +P Sbjct: 134 MRITEKGLVLGMVASDTY--FKPGDAEVQPTAQAVLAALAPVLTGTPEDVAIEGYADPNP 191 Query: 277 -FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-KIASDPMNSANRRI 334 + N+ L+ RA L GV ++ IS A H+ A S NRR+ Sbjct: 192 QYSAKYPSNYHLAAGRAIEVLIHLRNGGVPGSKLRTISYGADHQTQVEAGQDAWSLNRRV 251 Query: 335 DILVEDR 341 DI++ R Sbjct: 252 DIVIMSR 258 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 51/175 (29%), Gaps = 6/175 (3%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK P N W + Y D +TV+M FLV++ I+ D + + + Sbjct: 3 KKKHECPEPENTERWAVSYLDMITVMMCLFLVLYAISQVDAGKLAKLSKSLAAGFNQSLQ 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + S + + + + + + +L+ + Sbjct: 63 VVSPLHTTSGLGLLSGSTSAVNLG------SMMGNDTTTAAGQPERIQAMAEASHLNQIK 116 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 Q + + + L + + YF P ++ + A L Sbjct: 117 QQVEQALAAAGQTGALQMRITEKGLVLGMVASDTYFKPGDAEVQPTAQAVLAALA 171 >gi|110638196|ref|YP_678405.1| outer membrane protein 3a [Cytophaga hutchinsonii ATCC 33406] gi|110280877|gb|ABG59063.1| outer membrane protein 3a [Cytophaga hutchinsonii ATCC 33406] Length = 903 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 FD + S PE L ++ + + I + +TD N LS R Sbjct: 560 ENIYFDFNQSDLRPEAKKTLDELAAYSNKNPQIQIELNANTDGL---GTDTYNRALSEKR 616 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 +A L+ GV RI ++ R ++D NRR++ + Sbjct: 617 GQAAIDYLIGKGVDHSRIV-MNPLGKERPLTSNDNEVGRQLNRRVEFYILG 666 >gi|21114987|gb|AAM42970.1| chemotaxis protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 89 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 6/75 (8%) Query: 267 SIRGHTDASPF---RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I G TD P DNW LS RA + + L+ GV + + F + + Sbjct: 1 MISGFTDDRPVLDSNRRYADNWELSAQRALTVTRALIAEGVPASSVFAAA-FGSQQPVDS 59 Query: 324 S--DPMNSANRRIDI 336 + + + NRR++I Sbjct: 60 NADETRRAKNRRVEI 74 >gi|56551062|ref|YP_161901.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp. mobilis ZM4] gi|241761362|ref|ZP_04759450.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753277|ref|YP_003226170.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56542636|gb|AAV88790.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp. mobilis ZM4] gi|241374269|gb|EER63766.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552640|gb|ACV75586.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 176 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 8/100 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S E +L + + +I GH D N L RA + Sbjct: 75 FALNSHDLDSEAKAILDREIQWFKKYPSTRVTIEGHCDER---GTREYNIALGEKRADAV 131 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 L K+GV+ + + R + + + NRR Sbjct: 132 RDYLAKAGVANS--INVISYGKERPLAMGSDEESWAQNRR 169 >gi|319639245|ref|ZP_07993996.1| outer membrane protein class 4 [Neisseria mucosa C102] gi|317399429|gb|EFV80099.1| outer membrane protein class 4 [Neisseria mucosa C102] Length = 253 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 5/121 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 G V + V + + +F PE L + + L Sbjct: 55 DKATQGRVECGDREAVAPVQQAPEYVDETVSLSTKTLFGFDKDNLRPEAQENLDALAQRL 114 Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 S + + + GHTD F + N LS RA L+ GV+ +IS + G Sbjct: 115 SNESVQTVRVEGHTD---FMGSEQYNQALSERRANVVANYLVGHGVASSKISAV-GLGES 170 Query: 319 R 319 + Sbjct: 171 Q 171 >gi|15893123|ref|NP_360837.1| peptidoglycan-associated lipoprotein precursor [Rickettsia conorii str. Malish 7] gi|15620330|gb|AAL03738.1| peptidoglycan-associated lipoprotein precursor [Rickettsia conorii str. Malish 7] Length = 155 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P+ L++ L+ E +++ GH D N L RA +A Sbjct: 53 FAFDSSALSPKAKEELERQACWLSKHPEVKVTVEGHCDER---GTKEYNLGLGERRAAAA 109 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337 + L G+ +R++ IS + R + + + NRR + ++ Sbjct: 110 KKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVTVV 153 >gi|241759220|ref|ZP_04757326.1| outer membrane Protein p.iii [Neisseria flavescens SK114] gi|241320356|gb|EER56653.1| outer membrane Protein p.iii [Neisseria flavescens SK114] Length = 253 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 5/121 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 G V + V + + +F PE L + + L Sbjct: 55 DKATQGRVECGDREAVAPVQQAPEYVDETVSLSTKTLFGFDKDNLRPEAQENLDALAQRL 114 Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + E + + GHTD F + N LS RA L+ GV+ +IS + G Sbjct: 115 SNKNVETVRVEGHTD---FMGSEQYNQALSERRANVVANYLVGRGVASSKISAV-GLGES 170 Query: 319 R 319 + Sbjct: 171 Q 171 >gi|83592206|ref|YP_425958.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170] gi|83575120|gb|ABC21671.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170] Length = 220 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 6/106 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 +F+ +S+ L +++ L +IG +L + ++ I GHTDA + N LS RA Sbjct: 116 PILFEINSAEILVKSLPYLNQIGTLLREESALILVIEGHTDA---NGPSDYNLALSRKRA 172 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + L+ + R+ + G L S P + NRR+ Sbjct: 173 EAVADYLIGSFAIPPARL-RTEGKGESALLRPSSPTHPDNRRVQFY 217 >gi|85709639|ref|ZP_01040704.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1] gi|85688349|gb|EAQ28353.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1] Length = 370 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 FD S+ + +L A+ + + GHTD N L+ Sbjct: 259 PYIVFFDFDESVITADAATILDNAVTAYANCGTAAVMLAGHTDR---SGSVTYNMGLAER 315 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 R S L G+ + RIS F + ++ + NRR+++ Sbjct: 316 RNASVRAYLTGRGIPDGRISS-EAFGESQPRVPTADGVRELQNRRVEVT 363 >gi|315586519|gb|ADU40900.1| flagellar motor protein MotB [Helicobacter pylori 35A] Length = 255 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ L++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDSINQDMMLYLERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 67.3 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|255037333|ref|YP_003087954.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254950089|gb|ACT94789.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 366 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 47/158 (29%), Gaps = 7/158 (4%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + R + + T++ + L I T F +S Sbjct: 205 DKTDEEPRTYIIKLSLQRTINIKGRPIARPVAAVANVESPALKGISASDKTLYFPRSDYK 264 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 ++ L + + + I GHTD N LS R + L+ Sbjct: 265 LPMQSRTYLDSVAMYILENKNKGLRITGHTDNV---GNPSLNLTLSEYRVRVISRYLIGK 321 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 GV E + G +D + NRR+++ + Sbjct: 322 GVPEG-VIAAVGVGSRFPVRPNDSEENRRMNRRVEVQI 358 >gi|197335579|ref|YP_002155689.1| sodium-type flagellar protein MotY [Vibrio fischeri MJ11] gi|197317069|gb|ACH66516.1| sodium-type flagellar protein MotY [Vibrio fischeri MJ11] Length = 292 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 10/154 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 Q + I LS ++ V + S D T + FDK+S + Sbjct: 139 ADWQSPKQIIEVALSPVLFQE-QYNVFSMCIANLLPYSFEDISFTILHFDKNSDELNKAS 197 Query: 249 IVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L +I + + +++ + +TD+ N ++S RA G+ Sbjct: 198 KKRLSQIADFIKYTKDVDLVLVATYTDS---SGGKNVNQQVSERRALKLQNYFESIGLPA 254 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 DRI ++ + R + + NRR+ I + Sbjct: 255 DRI-RVHSYGERRPIADNATPIGKNKNRRVVISL 287 >gi|284036645|ref|YP_003386575.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283815938|gb|ADB37776.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 322 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 7/98 (7%) Query: 245 LPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 ET + L+ + + GHTD+ N +LS DRA L K+G Sbjct: 229 TDETKKFFAEAVAYLSSHKDKKLVLTGHTDS---SGPDAVNMQLSRDRANDVKNKLRKTG 285 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 + +I ++ K + ANRR+ ++VE Sbjct: 286 IEASQI-EVRAKGETEPKADNSTISGRKANRRVSVVVE 322 Score = 41.5 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 4/84 (4%) Query: 230 DQRNTPMFD-KSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRL 287 D F ++ + L + L + I G+ ++ N L Sbjct: 67 DLPGNFSFAKSGANANMNTLGGSLGTMIAYLKANPGRSLEIVGYYSSAEANTTPFPN--L 124 Query: 288 SLDRAYSAYQVLMKSGVSEDRISK 311 L RA Q L++ G+ ++ Sbjct: 125 GLARAEGIRQYLVQQGIPAASLTT 148 >gi|119356691|ref|YP_911335.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354040|gb|ABL64911.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266] Length = 152 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +D S + + L+ + + + I GH D N L R Sbjct: 47 GDVFYDYDKSELRMDAVEQLKTNAAWMQRNAASSVVIEGHCDER---GTNEYNLALGERR 103 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A SA ++ GV R+ +S + R + + NRR Sbjct: 104 ANSAKDYIVNLGVDGARMKTVS-YGEERPFALGHDEASWAQNRR 146 >gi|323492355|ref|ZP_08097508.1| sodium-type flagellar protein MotY precursor [Vibrio brasiliensis LMG 20546] gi|323313402|gb|EGA66513.1| sodium-type flagellar protein MotY precursor [Vibrio brasiliensis LMG 20546] Length = 293 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 97/303 (32%), Gaps = 18/303 (5%) Query: 44 LMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSID 103 L A LV+ + A +QY ++ E + Sbjct: 4 LFATSLVL-SLTAFSAQAYALDKQYVAKPQQSTWQMVANTPLECRLVHPIPNYGDAVFSS 62 Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163 K ++D ++ Q + + + + + R ++ Sbjct: 63 HASKKINLDFELKMKRPMGQTRDVSLVSMPPAWRPGEGADRITNIRFFQQFDGYVGGQTA 122 Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + E P S ++ + + + +SS L + + + Sbjct: 123 WNILGELEKGRYPTFSYQEWRSRDERIEVA-----LSSVLFQRSYNVFSDCIANLLPYSF 177 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIA 281 I+ +D++S ++ L +I E + H+ ++ + +TDA ++ + Sbjct: 178 EDIAFTILH----YDRTSVELNKQSQKRLAQIAEYIKHNQDIDLVLVSTYTDAEDSKSAS 233 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 + LS RA + G+ EDRI ++ G+ R + NRR+ I + Sbjct: 234 QS---LSERRAEVLQEYFKSLGLPEDRI-RVQGYGKRRPIDDNASPIGKDRNRRVVISLG 289 Query: 340 DRQ 342 Q Sbjct: 290 RTQ 292 >gi|26987864|ref|NP_743289.1| OmpA/MotB domain protein [Pseudomonas putida KT2440] gi|24982567|gb|AAN66753.1|AE016303_8 OmpA family protein [Pseudomonas putida KT2440] Length = 344 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 18/229 (7%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 S + K+ ++Q K+++T + K +S+ ++ Sbjct: 42 SPDGSKEGGSSWWPFGSDKVAEQE--VKSAVTENVAKADAKSESSSRWWWPFGGDDKQAK 99 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 KI + L + K+ + + + + T D+ N + Sbjct: 100 GPVVPKIDQKATQAWLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL 159 Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 P ++ + ++ + + + + GH D+ A N +LSL+RA S Sbjct: 160 ---------PMSLGPITRVAKTVEGDPKTAVLVLGHADS---SGAAVANQKLSLERAASV 207 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + SG+ DR+ + G + A+D NRR+++L+ + Sbjct: 208 SAIFRLSGLQRDRL-TLKGMGSVMPRAANDSAEGRALNRRVEMLLTPQN 255 >gi|260779320|ref|ZP_05888212.1| putative sodium-type flagellar protein MotY precursor [Vibrio coralliilyticus ATCC BAA-450] gi|260605484|gb|EEX31779.1| putative sodium-type flagellar protein MotY precursor [Vibrio coralliilyticus ATCC BAA-450] Length = 303 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 8/109 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAY 293 FD + L + L + + G+TD N +S RA Sbjct: 180 SFDLGQRHLTVQQTNTLGALYTYLRADKNISKVLIDGYTDNV---GSNVANLTISKQRAD 236 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 + L KSGV RI ++ ++ + NRR+ + + Sbjct: 237 LVAKALKKSGVEAARI-EVRSHGSRYPIASNSTPEGQAKNRRVTLRLVR 284 >gi|37704652|gb|AAR01598.1| OprF [Pseudomonas sp. MFY140] Length = 320 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 6/111 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V + + ++ FD S+ P + ++ + + + + + GHT Sbjct: 214 NVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTTTTVEGHT 273 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 D+ N +LS A + QVL GV R+ + G+ R Sbjct: 274 DSV---GPDAYNQKLSERLANAVKQVLTNQYGVEASRVQSV-GYGESRPVA 320 >gi|145589655|ref|YP_001156252.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048061|gb|ABP34688.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 163 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 9/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRL 287 + + FD S P+ + L I I+G+TD A N L Sbjct: 54 NKRSIYFDFDSYTIDPKYASTVSAHASYLKSFQKQKASIIIQGNTDDR---GTAEYNLAL 110 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 R+ + + L+ GVSE ++ +S F + + + NRR D + Sbjct: 111 GQKRSEAVKKALLVQGVSESQLESVS-FGKEKPANPAQTDAAFQENRRADFV 161 >gi|305665970|ref|YP_003862257.1| OmpA domain-containing protein [Maribacter sp. HTCC2170] gi|88710745|gb|EAR02977.1| OmpA domain protein [Maribacter sp. HTCC2170] Length = 301 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 83/280 (29%), Gaps = 14/280 (5%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 ++ P + + + + +S L S + Sbjct: 30 GMQSKEEPEKEVITSIEPKATSFPFSFSDGDFTYSANDNFNFNSSSSAILTPVSQGVEDG 89 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + L++ + S + + + +++ N + +P + Sbjct: 90 IESLKSFLDENSEKVFNINGYYTSDEENDSAFPNLGLARANAVKNYFVSKGIPSKLMNTL 149 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS--S 241 +K +L ++ L + + I I + F+ + S Sbjct: 150 GQLK-----NELVPNVNLFSGPLGYSIANRAEDADEQLADIYQRIKGNPISLEFNTAEAS 204 Query: 242 SIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 E I L V +I GHTD + N +L +RA A LM Sbjct: 205 INLRAEQRQKFANISRYLDKEDDAVANIVGHTDNT---GQRDANIKLGQERADFAKSYLM 261 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 ++G+ E RI+ S ++D + NRR I + Sbjct: 262 RNGIPESRINATS-KGPDEPIASNDTEEGRAKNRRTVITL 300 >gi|329954289|ref|ZP_08295383.1| OmpA family protein [Bacteroides clarus YIT 12056] gi|328527995|gb|EGF54981.1| OmpA family protein [Bacteroides clarus YIT 12056] Length = 224 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 8/147 (5%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 K + V+ + + D + +F +SS + L+ + Sbjct: 75 KMDKKAAEAAKIEGAQVEVVKDANNLDAVKVTFD--SGILFAFNSSTLSNDAKASLRDLA 132 Query: 257 EVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 ++L +T I+I GHTD N ++S +RAY+ L GVS + ++ G Sbjct: 133 KILKEDTTTDIAIIGHTDKV---GTYEANMKVSKNRAYAVENYLQDCGVSPSQFKQVEGV 189 Query: 316 AHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ + NRR+ I + + Sbjct: 190 GYNE--YDESLSAAQNRRVVIFMYASE 214 >gi|117619075|ref|YP_857151.1| sodium-type flagellar protein MotY [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560482|gb|ABK37430.1| sodium-type flagellar protein MotY [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 287 Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 9/111 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +DK+S + L IGE + S +V+ I ++D+ N +LS RA + Sbjct: 180 YDKNSDELSLASKRRLAMIGEYVKVDKSIDVVVIDAYSDSY---GGRWPNQKLSEKRADA 236 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 +V M G+ +I + G + +++ + NRR+ I R G Sbjct: 237 IKKVFMDLGIEPGKI-SVEGHGEKQHIASNETEDGRAKNRRVVIN-MGRNG 285 >gi|238650590|ref|YP_002916442.1| peptidoglycan-associated lipoprotein precursor [Rickettsia peacockii str. Rustic] gi|238624688|gb|ACR47394.1| peptidoglycan-associated lipoprotein precursor [Rickettsia peacockii str. Rustic] Length = 155 Score = 76.9 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P+ L++ L+ E +++ GH D N L RA +A Sbjct: 53 FAFDSSALSPKAKEELERQACWLSKHPEVKVTVEGHCDER---GTKNYNLGLGERRAAAA 109 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337 + L G+ +R++ IS + R + + + NRR + ++ Sbjct: 110 KKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVTVV 153 >gi|126737228|ref|ZP_01752963.1| peptidoglycan-associated lipoprotein [Roseobacter sp. SK209-2-6] gi|126721813|gb|EBA18516.1| peptidoglycan-associated lipoprotein [Roseobacter sp. SK209-2-6] Length = 172 Score = 76.9 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + +F S E +LQ L + + + +I+GH D N L R Sbjct: 62 DRVLFPVDQSTLSAEATTILQGQARWLTANPDYVVTIQGHADEQ---GTREYNLALGARR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR 333 A A L+ G++ RI ++ F R +++ + NRR Sbjct: 119 ANEARDFLIGQGIAGTRI-QVVSFGKERPLEICSAESCYAKNRR 161 >gi|116255792|ref|YP_771625.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115260440|emb|CAK03544.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 649 Score = 76.9 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 63/239 (26%), Gaps = 14/239 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + + + + + + +++ E ++ ++ Sbjct: 412 AQEMMAANQPVADYEPLLVAADSPQVLWQASATLGEIYFSARRFADAAADYQQAIEIIKN 471 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + +S A + + + + GVL + Sbjct: 472 ETRTPKAPPAETISDLIQRAAQARILAANPTSDNPEGSFVPAEKDHRSGVLGGIYSENVR 531 Query: 226 -ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARD 283 I + FD + S Q++ E L I + GHTD Sbjct: 532 GIVPVSIPVPITFDFNKSSFTSIGTEAAQELLEALKEQKPGRIILVGHTDRR---GGDDY 588 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-------NSANRRID 335 N +LS RA + L +G+ G + ++ NRR++ Sbjct: 589 NQKLSERRAQAVADFLKSNGLDAT--IDAEGRGASEPVDVTATANLTEDDVDALNRRVE 645 >gi|146302267|ref|YP_001196858.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146156685|gb|ABQ07539.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 643 Score = 76.9 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 12/116 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 FD S E + L+KI +VL + + IR HTD+ + N LS R Sbjct: 531 KMIYFDLDKSNIRTEAALDLEKILDVLNQNPTMKLDIRSHTDSR---ASHQYNEALSDRR 587 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 A S L+++GV+++R+ G+ +L ++ + NRR + ++ Sbjct: 588 AKSTISWLIQNGVAKNRL-TGKGYGETQLVNQCSDGVNCTEEEHQMNRRSEFIITA 642 >gi|58422899|gb|AAW73249.1| OmpA [Serratia sp. MF 426] Length = 228 Score = 76.9 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 7/92 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 + +F+ + + PE L ++ L+ + + G TDA A+ N RLS Sbjct: 119 SDVLFNFNKATLKPEGQHALDQLYTQLSSLDPKDGSVVVLGFTDAV---GSAQYNQRLSE 175 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 RA S L+ G+ D+IS G Sbjct: 176 QRAQSVVDYLVSKGIPSDKISA-RGMGKSNPV 206 >gi|152978717|ref|YP_001344346.1| OmpA domain-containing protein [Actinobacillus succinogenes 130Z] gi|150840440|gb|ABR74411.1| OmpA domain protein transmembrane region-containing protein [Actinobacillus succinogenes 130Z] Length = 356 Score = 76.9 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 16/131 (12%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR 282 ++ + F + S PE L I +A + +++ G+ D Sbjct: 226 VVNKTFTLNSDVTFGFNKSTLKPEAASTLDGIYSEIAQVSSPAVAVNGYADRI---GKDA 282 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SAN 331 N +LS RA + L+ GV + I+ +G+ + + + Sbjct: 283 ANLKLSQRRAETVANYLVSKGVDSNAITA-TGYGSANPVTGNTCDAVKGRKALIACLAPD 341 Query: 332 RRIDILVEDRQ 342 RR+++ V+ + Sbjct: 342 RRVEVQVQGNK 352 >gi|296536906|ref|ZP_06898945.1| peptidoglycan-associated lipoprotein [Roseomonas cervicalis ATCC 49957] gi|296262766|gb|EFH09352.1| peptidoglycan-associated lipoprotein [Roseomonas cervicalis ATCC 49957] Length = 130 Score = 76.9 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS + L++ LA + + + GH D N L R Sbjct: 25 DRVFFDTDSSSVRGDQRATLERQAAWLAQYPQVQVLMEGHADER---GTREYNLALGQRR 81 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 A SA VL+ GV+ RIS IS + R + NRR +V Sbjct: 82 ANSARDVLVAQGVAPARISTIS-YGKDRPAALGSTPDAWAQNRRAVTVVR 130 >gi|120600520|ref|YP_965094.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1] gi|146294678|ref|YP_001185102.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32] gi|120560613|gb|ABM26540.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1] gi|145566368|gb|ABP77303.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32] Length = 202 Score = 76.9 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + +F S+ PE ++ I L +I GHT + N LS Sbjct: 74 KEINILFPNDSAFIAPEYYSQIEDIAAFLRQYPTTKVTIEGHTSRT---GTDERNAVLSQ 130 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 +RA + L + R++ I G+ R + + NRR+ Sbjct: 131 ERADAVTAALADRFNIDRSRLTAI-GYGSSRPIVLEQTPEAEMRNRRV 177 >gi|225075466|ref|ZP_03718665.1| hypothetical protein NEIFLAOT_00471 [Neisseria flavescens NRL30031/H210] gi|224953284|gb|EEG34493.1| hypothetical protein NEIFLAOT_00471 [Neisseria flavescens NRL30031/H210] Length = 253 Score = 76.9 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 39/121 (32%), Gaps = 5/121 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 G V + V + + +F PE L + + L Sbjct: 55 DKATQGRVECGDREAVAPVQQAPEYVDETVSLSTKTLFGFDKDNLRPEAQENLDALAQRL 114 Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + + GHTD F + N LS RA L+ GV+ +IS + G Sbjct: 115 SNKDVQTVRVEGHTD---FMGSEQYNQALSERRANVVANYLVGHGVASSKISAV-GLGES 170 Query: 319 R 319 + Sbjct: 171 Q 171 >gi|157164388|ref|YP_001467102.1| putative chemotaxis protein MotB [Campylobacter concisus 13826] gi|112801393|gb|EAT98737.1| putative chemotaxis protein MotB [Campylobacter concisus 13826] Length = 363 Score = 76.9 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 51/332 (15%), Positives = 115/332 (34%), Gaps = 32/332 (9%) Query: 33 WKIVYADFMTVLMAFFLVM-------WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 W + YAD M L+ F+++ +++ + K+ K+ + + + Sbjct: 14 W-VSYADLMAGLLFVFMLLIGAVVVKYVLTQNTLENKEQAIIAALANLKDAQGKNFTLEE 72 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 + + D +I+ + ++I + +K EN S + + + Sbjct: 73 LNDALKSELSKISDENINLKKSNEIFIIQIDALKEKLAQLINENKDANASIKELNASIFD 132 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + ++ N L ++ K++ R +L + ++ T Sbjct: 133 LNQKMIVLNDEISSKDRALSDANASGEKNLAKIAFLLEQVSKKEARYDELLRDLNVTRDR 192 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTP--------MFDKSSSIPLPETIVVLQK--- 254 + ++ + + + SI N+ +FDK S++ E L+ Sbjct: 193 VKNLTGIRVKVISALKDRLGNSIEIDPNSGALKLSSSVLFDKGSAVLKEEVKEELKATLS 252 Query: 255 -------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE- 306 + +A + + I I G TD+ N LS RAY+ + + Sbjct: 253 KYFDVLLNDKEIASNIDQIVIEGFTDSD---GSYIYNLELSQKRAYAVMEFINSFSDDAR 309 Query: 307 -DRISKISGFAHHRLKIASDPMN-SANRRIDI 336 ++ SG +++ L + A+RRI+I Sbjct: 310 LRKLLVASGRSYNELVFKDGAEDKDASRRIEI 341 >gi|254229410|ref|ZP_04922826.1| OmpA family protein [Vibrio sp. Ex25] gi|262396871|ref|YP_003288724.1| outer membrane protein [Vibrio sp. Ex25] gi|151938101|gb|EDN56943.1| OmpA family protein [Vibrio sp. Ex25] gi|262340465|gb|ACY54259.1| outer membrane protein [Vibrio sp. Ex25] Length = 205 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 7/111 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD S++ + + L I I+G+ A N LS RA + Sbjct: 83 LFDNDSALINQIFKNKIDGLAAFLKKYPTTSIEIQGYASKV---GRAEYNLNLSRHRAEN 139 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQG 343 +L++ G+ DR+ I F +L ++ NRR+ V +QG Sbjct: 140 VRNLLIEKGIPGDRL-AIIAFGDTQLAEPGMDRVSHALNRRVTATVVGQQG 189 >gi|170720335|ref|YP_001748023.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619] gi|169758338|gb|ACA71654.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 327 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 77/215 (35%), Gaps = 16/215 (7%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + S+ + K ++T K +S ++ KI + Sbjct: 35 WPFGSDEVAEQEVKQAVTEKVAKADAKSESASRWWWPFGGDDKQAKGPVVPKIDEKATQA 94 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L K+ + + E ++++I + ++ LP ++ Sbjct: 95 WLDQYEPKLREAIKDSK-------LELERRENVLVVTIPADSSYN--PDRPNMLLPMSLG 145 Query: 251 VLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 + ++ + + + + GH D A N +LSL+RA S + SG+ DR+ Sbjct: 146 PITRVAKAVEGDPKTAVLVLGHADT---SGAAATNQKLSLERAASVSAIFRLSGLKRDRL 202 Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + G + A+D + NRR+++L+ + Sbjct: 203 -SLKGMGSEMPRAANDSVEGRALNRRVEMLLTPQN 236 >gi|327252310|gb|EGE63982.1| ompA family protein [Escherichia coli STEC_7v] Length = 127 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 19 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEALSLKR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G R G ++ + NRR+ +++ Sbjct: 76 ANVVADAWAMGGQIPRRNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127 >gi|254780547|ref|YP_003064960.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62] gi|254040224|gb|ACT57020.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62] Length = 160 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 6/110 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 ++ FD SS P I VL +G L I GH D + L L RA Sbjct: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRA 106 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340 Y+ + + G+S R+ ++ + + + + NRR + ++ Sbjct: 107 YAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155 >gi|24374850|ref|NP_718893.1| OmpA family protein [Shewanella oneidensis MR-1] gi|24349542|gb|AAN56337.1|AE015771_7 OmpA family protein [Shewanella oneidensis MR-1] Length = 196 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 8/110 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ + + L + L +TE ++ GHTD N++LSL RA Sbjct: 90 VYFEFAIAEVDLSQWKALALVKSFLEANTETKLTLVGHTD---IVGTPEFNYQLSLQRAQ 146 Query: 294 SAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 + ++L++ G + +R + G + NRR+ +V + Sbjct: 147 NVKRILVEDYGFNPNRF-TVVGKGISEPVADNRSSEGRGLNRRVQFIVNN 195 >gi|332665133|ref|YP_004447921.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332333947|gb|AEE51048.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 143 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 38/105 (36%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S E I L K + + I GHTD A N LS R+ + Sbjct: 38 FGGGSHYIDQEQIDALYKWLDGIPEVDSHDISIHGHTDNI---GGAEYNQWLSQMRSDNT 94 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 Q L+ G+ + + I F + NRR+DI+V Sbjct: 95 LQKLVDKGLRTE-MISIRDFGQFNPLFDNSTWEGRRKNRRVDIIV 138 >gi|294341056|emb|CAZ89451.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL) [Thiomonas sp. 3As] Length = 182 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + F +S + VL L + + ++G+TDA N L Sbjct: 75 PKSVYFAFNSYTVESQYTPVLNANATYLTQHPQAHVQLQGNTDAR---GSREYNLALGQK 131 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + + GV ++ IS + + K + + NRR+DI+ Sbjct: 132 RADAVMKGMELLGVKPSQMEAIS-YGKEKPKALGNTEADYAENRRVDIV 179 >gi|168703394|ref|ZP_02735671.1| OmpA/MotB domain protein [Gemmata obscuriglobus UQM 2246] Length = 183 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 63/187 (33%), Gaps = 10/187 (5%) Query: 29 NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQN 88 GSWK+ YADF+T +MAFFLVMW I A D ++++ YF + Sbjct: 4 GGGSWKVAYADFVTAMMAFFLVMW-IGAQDVKVRQSVANYFIDPAGVSKKPVSDGAVLET 62 Query: 89 PPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLT 148 P ++ ++ S + ST + +++ Sbjct: 63 PSSGPVAGQLQVAGGRGTRVPSGGVPSPSTAA---------ILNWINADAARSRHWKGEA 113 Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 + + K+ + ++ + E L L + K + + S + Sbjct: 114 QRVREAAAAQKAVNESRTPEEVEIAQLSQLLASDLAGTVPKDMPEVYKDLLFSAFKEVNW 173 Query: 209 DNIVKGV 215 + + + Sbjct: 174 EQVAGTL 180 >gi|293603403|ref|ZP_06685830.1| peptidoglycan-associated lipoprotein [Achromobacter piechaudii ATCC 43553] gi|292818176|gb|EFF77230.1| peptidoglycan-associated lipoprotein [Achromobacter piechaudii ATCC 43553] Length = 166 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 7/113 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 SI+ Q+ + FD S + +++ LA + I G+TD A N Sbjct: 54 SILAQQRSVYFDFDSYTVSDQYRGLVETHARYLASHQQQKVKIEGNTDER---GGAEYNL 110 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 L RA + +++ GVS+++I IS F + K + NRR DI Sbjct: 111 ALGQRRADAVRRMMTLLGVSDNQIETIS-FGKEKPKSTGTSEADFAENRRADI 162 >gi|260778741|ref|ZP_05887633.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604905|gb|EEX31200.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450] Length = 279 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 71/224 (31%), Gaps = 8/224 (3%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + L + Q ++ ++L R+ + + N+ L + Sbjct: 45 PDEPLGPEHGLRFDWQLAKLHLDALIREGARWCFPAAVVQALEKQNRIARELEGGLLLDA 104 Query: 183 ILAMK-RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + ++KRL +L +++ S F+ I F +S Sbjct: 105 ANDIVIQRKRLDELERQLDYVTSQAKCVPPHDEFSFQQQLAIIDKLYNLLNVDNQFAFNS 164 Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + P+ + L + +L +++ GH D+ N +L++ RA + L Sbjct: 165 TEVNPKYMGHLAQAANILREHKSLNLTVTGHADSV---GDELQNQQLAMGRAKQVKRYLT 221 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 G+ RI + NRR+ I V + Sbjct: 222 IFGLEPKRIEA-KSLGESLPLFEGESDGVRLTNRRVSIEVVETN 264 >gi|153831615|ref|ZP_01984282.1| OmpA family protein [Vibrio harveyi HY01] gi|148872125|gb|EDL70942.1| OmpA family protein [Vibrio harveyi HY01] Length = 301 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 81/292 (27%), Gaps = 33/292 (11%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + I + P + + ++ +++ + +D I + + Sbjct: 34 FADVNVSKF-LISECLAPQREIHIAVAQHFDFDKSIIREADAASLDAFIRDIQGLSGRIT 92 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 +G T+ K + + +E E + + K Sbjct: 93 IVGHTDFKG-------------SDEYNEKLSMRRAESVEAYLQQQLNPEQYDWEVKHFGE 139 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 P + A +R + ++ + T Sbjct: 140 SQPLALGKSDQARAENRRAYVMFEEAKKYEEMPFCEPPKPERKIYMAMTPH--------- 190 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S PE + L L I + GHTD N +L+ RA Sbjct: 191 ---FDFDKSELKPEDLSQLDDFIAKLQGLEGSIMVAGHTDQV---GSLSYNEQLAERRAQ 244 Query: 294 SAYQVLMKSGVSEDRIS-KISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 + L K+ + + ++ F + I + + NRR I+ ++ + Sbjct: 245 TVVAYL-KTKLDPSQFVWEVKAFGELQPVINEESPEANALNRRAFIVFKESE 295 >gi|37679728|ref|NP_934337.1| outer membrane protein [Vibrio vulnificus YJ016] gi|37198473|dbj|BAC94308.1| outer membrane protein [Vibrio vulnificus YJ016] Length = 226 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 7/181 (3%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + LQD + L D + + Sbjct: 33 ATPVIASDKADEYDYLATPRADQLADLQDQDRDGVINARDLCPDTPSTAEIDNDGCGTYV 92 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284 + + +F S P ++++ E L I ++G+ + A N Sbjct: 93 KTSQQMQIRVLFANDSDKINPVFRKQIKEMSEFLKLYPSTSIELQGYASRT---GNAEHN 149 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342 LS RA + ++L+ G+++ R+ +I GF L + ++ NRR+ V + Sbjct: 150 LDLSKRRANNVREMLIGYGIAQSRV-RIVGFGDSALANEGTDEVSHALNRRVVASVVGYK 208 Query: 343 G 343 G Sbjct: 209 G 209 >gi|212633286|ref|YP_002309811.1| OmpA protein [Shewanella piezotolerans WP3] gi|212554770|gb|ACJ27224.1| OmpA [Shewanella piezotolerans WP3] Length = 201 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 Q +F S P ++ I + ++ GH + N LS Sbjct: 73 QELKILFANDSYYIDPVYYTQVEIIATFMQKFPNTQAVIEGHCSKT---GTHEHNQELSQ 129 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 +RA + +L + + R+S + G++ R + + NRR+ Sbjct: 130 NRANAVSALLSERFDIESSRLSAV-GYSFDRPIDPTHTAAAHKVNRRV 176 >gi|120436709|ref|YP_862395.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] gi|117578859|emb|CAL67328.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803] Length = 536 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289 + +FD + + L I + E+ I IR HTD+ + N +LS Sbjct: 412 DLDPILFDLDKAEIESKAARQLDHIAAYMQEYPELLIDIRSHTDSR---ADDKYNIKLSQ 468 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRRIDILV 338 +R Q L+ GV +RI G+ L + ++ NRR + ++ Sbjct: 469 NRVAVTRQYLVNMGVDGNRI-SGRGYGETELVNNCRNKIPCPEDAHAINRRSEFIL 523 >gi|238919302|ref|YP_002932817.1| outer membrane protein A [Edwardsiella ictaluri 93-146] gi|238868871|gb|ACR68582.1| outer membrane protein A [Edwardsiella ictaluri 93-146] Length = 353 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 18/125 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + E L ++ L+ + + G+TD + N +LS Sbjct: 225 KSDVLFNFNKFTLKAEGRQALDQLYSQLSSMDPKEGSVVVLGYTDRI---GSDQYNLKLS 281 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNS--AN-----RRIDIL 337 RA + L+ G+ ++I G + + N RR+ I Sbjct: 282 KQRAQTVVDYLVSKGIPANKI-AARGMGKADPVTGSTCDNVKPRASLINCLAPDRRVVIE 340 Query: 338 VEDRQ 342 V+ + Sbjct: 341 VKGTK 345 >gi|224824631|ref|ZP_03697738.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002] gi|224603124|gb|EEG09300.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002] Length = 218 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 56/166 (33%), Gaps = 22/166 (13%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 K + L + + + + +++ + +FD + + + Sbjct: 51 DKATEGLVECGDKEAAKPAPTPVAEAPKPAMVAVKEKVTLSAK---VLFDFNKTNLRADA 107 Query: 249 IVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L + L + S+ GHTD + + N LS RA + + +GV Sbjct: 108 KNELDPLVSRLKGDANLKSVEVDGHTD---YLGSEKYNQALSQKRADAVKNYFVAAGVPA 164 Query: 307 DRISKISGFAHHRLKIASDPMNSA-------------NRRIDILVE 339 ++++ + G K+ + +RR+++ ++ Sbjct: 165 EKVTAV-GKGESEAKLTDECKAKKFKKKAALQACLEGDRRVELTID 209 >gi|217034137|ref|ZP_03439557.1| hypothetical protein HP9810_868g30 [Helicobacter pylori 98-10] gi|216943421|gb|EEC22877.1| hypothetical protein HP9810_868g30 [Helicobacter pylori 98-10] Length = 255 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ L++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDAINQDMMLYLERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|110806727|ref|YP_690247.1| putative outer membrane lipoprotein [Shigella flexneri 5 str. 8401] gi|110616275|gb|ABF04942.1| putative outer membrane protein [Shigella flexneri 5 str. 8401] Length = 160 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A + G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWVIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|59711570|ref|YP_204346.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio fischeri ES114] gi|197335447|ref|YP_002155724.1| peptidoglycan-associated lipoprotein [Vibrio fischeri MJ11] gi|59479671|gb|AAW85458.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio fischeri ES114] gi|197316937|gb|ACH66384.1| peptidoglycan-associated lipoprotein [Vibrio fischeri MJ11] Length = 188 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSL 289 + T F +S E +L L A + +++ GH D N L Sbjct: 82 KVQTVYFAFDNSTISSEYEDMLAAHAAFLSADPSIKVTVEGHADER---GTPEYNIALGE 138 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GVS D+IS +S + + + + NRR ++ Sbjct: 139 RRAKAVSKYLQALGVSADQISIVS-YGEEKPLVLGQTAEDYAKNRRAVLV 187 >gi|297579202|ref|ZP_06941130.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297536796|gb|EFH75629.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 212 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 7/152 (4%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + LQD + L D + + S Q+ +F SS Sbjct: 42 ANQIADLQDDDRDGVINARDLCPDTPKGSEIDNDGCGTFVKSSQMQQLHILFANDSSSIE 101 Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P + ++++ E L I ++G+ A N LS R+ + L++ GV Sbjct: 102 PAFLTQIRQMAEFLQTYPSTSIELQGYASKV---GSAEHNLALSKQRSEAVRDQLLRYGV 158 Query: 305 SEDRISKISGFAHHRLKI--ASDPMNSANRRI 334 + +R++ I G+ L+ D ++ NRR+ Sbjct: 159 APERVN-IVGYGDSVLEAEGTDDVSHARNRRV 189 >gi|37679367|ref|NP_933976.1| sodium-type flagellar protein MotY precursor [Vibrio vulnificus YJ016] gi|37198110|dbj|BAC93947.1| sodium-type flagellar protein MotY precursor [Vibrio vulnificus YJ016] Length = 295 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 55/159 (34%), Gaps = 8/159 (5%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + R Q + +S+ L + V + IS ++++ Sbjct: 142 QDWQSRDQRIEVALSAVLFQQKYNVFSDCVANLLPYSFEDISFTILH----YERNGDKLT 197 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L +I E + +++++ + T + LS RA S G+ Sbjct: 198 KASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVS-QNLSERRAESLRDYFKALGLP 256 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 EDRI ++ G+ R + NRR+ I + + Sbjct: 257 EDRI-QVQGYGKRRPIADNATPIGKDKNRRVVISLGRSE 294 >gi|152978942|ref|YP_001344571.1| SmpA/OmlA domain-containing protein [Actinobacillus succinogenes 130Z] gi|150840665|gb|ABR74636.1| SmpA/OmlA domain protein [Actinobacillus succinogenes 130Z] Length = 282 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 14/113 (12%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD E V+ + L S + +S+ G+TD N LS R Sbjct: 147 GDFLFDFDKDTLTTEGKKVVDNVASQLKSSEAKEVSVAGYTDRL---GSDAYNLDLSQRR 203 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI 336 A L++ GVS +G+ A + NRR++I Sbjct: 204 ADRVKNRLIEQGVSAQ--ITATGYGKANQVKACEGERGQALINCLHPNRRVEI 254 >gi|157829031|ref|YP_001495273.1| peptidoglycan-associated lipoprotein precursor [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933755|ref|YP_001650544.1| peptidoglycan-associated lipoprotein [Rickettsia rickettsii str. Iowa] gi|157801512|gb|ABV76765.1| peptidoglycan-associated lipoprotein precursor [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908842|gb|ABY73138.1| peptidoglycan-associated lipoprotein [Rickettsia rickettsii str. Iowa] Length = 155 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 7/100 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P+ L++ L+ E +++ GH D N L RA +A Sbjct: 53 FAFDSSDLSPKAKEALERQACWLSKHPEVKVTVEGHCDER---GTKEYNLGLGERRAAAA 109 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 + L G+ +R++ IS + R + + + NRR Sbjct: 110 KKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRR 148 >gi|320577120|gb|ADW54069.1| outer membrane protein A [Sodalis glossinidius] Length = 290 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 7/96 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + PE L ++ L+ + + G+TD + N +LS Sbjct: 182 KSDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GTEQYNQKLS 238 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +RA S L+ G+ D+IS G + Sbjct: 239 QERAQSVVSYLVSKGIPSDKISA-RGMGKSNPVTGN 273 >gi|190150781|ref|YP_001969306.1| outer membrane protein P5 precursor [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264101|ref|ZP_07545698.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915912|gb|ACE62164.1| outer membrane protein P5 precursor [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870579|gb|EFN02326.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 369 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +A+ T I + G+TD N +LS Sbjct: 246 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 302 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338 RA + L+ G + ++ + G+ D + +RR+++ V Sbjct: 303 RRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQV 361 Query: 339 EDRQ 342 + + Sbjct: 362 QGAK 365 >gi|145628739|ref|ZP_01784539.1| scaffold protein [Haemophilus influenzae 22.1-21] gi|144979209|gb|EDJ88895.1| scaffold protein [Haemophilus influenzae 22.1-21] Length = 153 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 7/135 (5%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 ++ +T + + + NT F E + +L L Sbjct: 18 AACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 77 Query: 262 ST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + + G+TD N L RA + L GV ++ +S + + Sbjct: 78 TPATKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKP 133 Query: 321 KIASDPMNS--ANRR 333 + + NRR Sbjct: 134 AVLGHDEAAYSKNRR 148 >gi|239817427|ref|YP_002946337.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110] gi|239804004|gb|ACS21071.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110] Length = 168 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 7/105 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD P+ V++ L + + I GHTD R N L RA Sbjct: 65 VYFDFDKYDVKPQYRNVVEAHASYLRNRPASKVVIEGHTD---LRGGREYNLALGQRRAE 121 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDI 336 S + L + GV +RI +S + + ++ + NRR + Sbjct: 122 SVQRALTQLGVPGERIEAVS-WGIEKPASLETTEEGHQLNRRAEF 165 >gi|91787861|ref|YP_548813.1| OmpA/MotB [Polaromonas sp. JS666] gi|91697086|gb|ABE43915.1| OmpA/MotB [Polaromonas sp. JS666] Length = 180 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + PE +++ L A+ ++I GHTD N L R+ + Sbjct: 79 FDFDSYVIKPEFQGIVEAHARYLTANKARKMAIEGHTDER---GGREYNLALGQRRSEAV 135 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 + L GV++ ++ +S F + + + NRR +I Sbjct: 136 RRALGLLGVADAQVEAVS-FGKEKPAATGSDEDSMAKNRRAEI 177 >gi|238920737|ref|YP_002934252.1| peptidoglycan-associated outer membrane lipoprotein [Edwardsiella ictaluri 93-146] gi|238870306|gb|ACR70017.1| peptidoglycan-associated lipoprotein, putative [Edwardsiella ictaluri 93-146] Length = 170 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 7/117 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 + + + + N F P+ + L L + ++ GHTD Sbjct: 57 LQMQELQKNNIVYFGLDKYDVTPDYMQELDAHAAFLRSNPSYKVTVEGHTDER---GTPE 113 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 N L RA + L GVS D+I +S + + + + NRR ++ Sbjct: 114 YNIALGERRANAVKMYLQGKGVSADQIDIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 169 >gi|238022763|ref|ZP_04603189.1| hypothetical protein GCWU000324_02674 [Kingella oralis ATCC 51147] gi|237865966|gb|EEP67102.1| hypothetical protein GCWU000324_02674 [Kingella oralis ATCC 51147] Length = 230 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLD 290 ++ +F PE I L + L+ + + + + G+TD F + N LS Sbjct: 85 QSEFLFGFDKYNLRPEAITTLNDLSAKLSQSNVQSVRVEGNTD---FMGSDKYNQALSER 141 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHR 319 RA + L++ GV DRIS + G + Sbjct: 142 RANTVANYLVQQGVPADRISAV-GLGETQ 169 >gi|328469233|gb|EGF40179.1| hypothetical protein VP10329_10131 [Vibrio parahaemolyticus 10329] Length = 301 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 39/292 (13%), Positives = 86/292 (29%), Gaps = 33/292 (11%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + + I + P + + ++ ++ + +D I + + Sbjct: 34 FSDVNVSKF-LISECLAPQREIHIAVAEHFDFDKFKIREADATSLDAFIRDIQGLSGRIT 92 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 +G T+ K + N QS D K + + + + Sbjct: 93 IVGHTDYKGSNE---YNDALSLRRAQSVAAYLKQQLDPTFYDWEIKHFGETQPLTLDTSD 149 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 ++ + + ++ ++ V + Sbjct: 150 QARAENRRAYVMFEEAQKYDEMPFCEPPKPERKVYMTMTPH------------------- 190 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S E + L E L I + GHTD N +L+ RA Sbjct: 191 ---FDFDQSELKAEDLTQLDDFIEQLQGLEGSILVAGHTDQV---GSLSYNEKLAERRAQ 244 Query: 294 SAYQVLMKSGVSEDRIS-KISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342 + + L K+ + R+ ++ F + I + N+ NRR I+ ++ + Sbjct: 245 TVAEYL-KTKLDASRLVWEVKAFGELQPVINQTTSEANALNRRAFIVFKESE 295 >gi|157164304|ref|YP_001466351.1| Omp18 [Campylobacter concisus 13826] gi|112800114|gb|EAT97458.1| Omp18 [Campylobacter concisus 13826] Length = 168 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 9/146 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + + + + ++ +I Q + FD + V+ V Sbjct: 26 VDMNANSNQSADNSGSMSDADRLAALIANIESQVKSVYFDFDKFNIKADQQGVVSSNASV 85 Query: 259 LAHSTEV---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + I + G+ D N+ L L RA SA L+++GVS DRI + F Sbjct: 86 FNQADAQALSIKVEGNCDEW---GTDEYNYALGLKRAKSAKDALVRNGVSADRI-AVVSF 141 Query: 316 AHHRLKIASDPMN--SANRRIDILVE 339 + NRR D V Sbjct: 142 GESNPVCTDKTKACDAQNRRADFKVL 167 >gi|51473939|ref|YP_067696.1| peptidoglycan-associated lipoprotein precursor [Rickettsia typhi str. Wilmington] gi|51460251|gb|AAU04214.1| peptidoglycan-associated lipoprotein precursor [Rickettsia typhi str. Wilmington] Length = 155 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ P+ L++ L+ E +++ GH D N L RA +A Sbjct: 53 FAFDSASLSPKAKEDLERQACWLSKHPEVKVTVEGHCDER---GTRDYNIALGERRAAAA 109 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR-IDIL 337 Q L G++ +R++ IS + + + + + NRR + ++ Sbjct: 110 KQFLANKGIAHNRLNTIS-YGKDKPAMMGNTEEAFSYNRRAVTVV 153 >gi|42527497|ref|NP_972595.1| OmpA family protein [Treponema denticola ATCC 35405] gi|41818082|gb|AAS12506.1| OmpA family protein [Treponema denticola ATCC 35405] Length = 452 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ ++ L L +I ++L S E + GHT + LS +RA + Sbjct: 350 FEPDRAVLLKGEEAKLDEIAKILKKSESEFFFVEGHTADV---GKPEEEKILSQERAKTV 406 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + L+K G+ ++ G + + NRR++I + Sbjct: 407 IEKLVKRGIPAEKFI-YQGAGGTKPISPNGTEEGRSQNRRVEITI 450 >gi|134288289|ref|YP_001110452.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4] gi|134132939|gb|ABO59649.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4] Length = 202 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 6/91 (6%) Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 P + L I I + GH D N RLS+ RA + L+ GV+ Sbjct: 110 PTSWAPLSSIVTRARGDDSPIKVVGHADEV---GGDDYNQRLSVRRATAVSNYLVAKGVA 166 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDI 336 +RI G + NRR+ I Sbjct: 167 RNRIES-EGHGKREPVSPG--AGAQNRRVVI 194 >gi|322515689|ref|ZP_08068662.1| OmpA protein [Actinobacillus ureae ATCC 25976] gi|322118234|gb|EFX90526.1| OmpA protein [Actinobacillus ureae ATCC 25976] Length = 383 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +A+ T I + G+TD N +LS Sbjct: 260 SDVLFDFGKSSLNPAAATALDAANTEIANLGLATLAIQVNGYTDRI---GKEASNLKLSQ 316 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338 RA + L+ G + ++ + G+ D + +RR+++ V Sbjct: 317 RRAETVANYLVSKGQNAANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV 375 Query: 339 EDRQ 342 + + Sbjct: 376 QGSK 379 >gi|50235077|gb|AAT70741.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 76/268 (28%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T + ++ + + Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + ++ +++ F + S PE+ L Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSELMLKATGALQGIFFHFNKSSIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GVS ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|7327635|gb|AAF45029.2|AF146597_1 putative outer membrane protein [Aeromonas hydrophila] Length = 344 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 18/125 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 + +F PE + L + + + + G+TD N +LS Sbjct: 220 NSDVLFAFGKDSLKPEGVAALNALYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLS 276 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA---------NRRIDIL 337 RA + L+ G++ ++ I G + D + + +RR+++ Sbjct: 277 EARARTVANFLVSKGMAASKV-AIEGRGEANPVTGTKCDGVKAKAQLISCLAPDRRVEVR 335 Query: 338 VEDRQ 342 V Q Sbjct: 336 VSGVQ 340 >gi|189219864|ref|YP_001940505.1| Flagellar motor protein [Methylacidiphilum infernorum V4] gi|189186722|gb|ACD83907.1| Flagellar motor protein [Methylacidiphilum infernorum V4] Length = 311 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 73/229 (31%), Gaps = 15/229 (6%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 ++ R+ L + + +E + E+ + K SK+ Sbjct: 53 EKTVRVLKEEDELLKQENQKQRAVVDQLQAELAQTGSLLKSQEELLEKTTQSLKAVESKK 112 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGILISIIDQRNTPMFDKS 240 + L +++ L+ L A+ I I+I + +F Sbjct: 113 RQEEAVSTHENFTLIHEMAQKLNALFAEEIQKGESWVIQNPQNIVIRF---SKSALFSYG 169 Query: 241 SSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFR----NIARDNWRLSLDR 291 +L+K+ L + I + +TD P N+ NW +S R Sbjct: 170 GIKISNSGKALLEKLITALKPYLDNSKEAKIEVCAYTDNDPPALEVQNVYPTNWEISAMR 229 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 + + + L++ + I ++ + + NRR++I + Sbjct: 230 SAAVIRTLIQLSQLPEDIFSLAAGGATKPIADNSFQEGKEKNRRVEITL 278 >gi|119477236|ref|ZP_01617472.1| peptidoglycan-associated lipoprotein OprL [marine gamma proteobacterium HTCC2143] gi|119449599|gb|EAW30837.1| peptidoglycan-associated lipoprotein OprL [marine gamma proteobacterium HTCC2143] Length = 175 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD + +T L VL ++ + + GH D N L+ RA + Sbjct: 77 FDFDQATLSADTREALDSQIAVLNENSNKVRLEGHADER---GTREYNMALAERRANAIA 133 Query: 297 QVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336 ++ +GV+ R+ +S + R +S+ S NRR+++ Sbjct: 134 NYMIINGVARYRVETVS-YGEERPVSAGSSESSYSENRRVEL 174 >gi|325285003|ref|YP_004260793.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324320457|gb|ADY27922.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 647 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289 + + FD S + + +Q++ L EV I +R HTDA N LS Sbjct: 533 KLDPIYFDLDKSFIRIDGQITMQQVFAYLKEYPEVVIEVRSHTDARATN---EYNLALSN 589 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-------MNSANRRIDILV 338 RA + L+ +G++ +R+ GF L D + NRR + +V Sbjct: 590 RRAKETVKYLLDNGIAPERV-SGKGFGESELTNNCDSNSKCSEEEHQKNRRSEFIV 644 >gi|145299432|ref|YP_001142273.1| sodium-type polar flagellum motor protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142852204|gb|ABO90525.1| sodium-type polar flagellum motor protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 291 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 9/112 (8%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 +DK+S + L IGE + S +V+ I ++D+ N +LS RA Sbjct: 183 SYDKNSDQLSLASRRRLAMIGEYVKVDKSIDVVVINAYSDSY---GGRWPNQKLSEKRAD 239 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 + +V + G+ +I + G R +++ + NRR+ I R G Sbjct: 240 AIKKVFVDLGIDPGKI-SVEGHGEKRHATSNETEDGRAKNRRVVIN-MGRNG 289 >gi|144897998|emb|CAM74862.1| conserved hypothetical protein, secreted [Magnetospirillum gryphiswaldense MSR-1] Length = 198 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ PE+ +L + + + SI GHTD A+ N+ L L RA Sbjct: 97 FQFQSTDLTPESKALLPSVLDEVKARPAPDLSIIGHTDGM---GDAKYNYELGLRRAKEV 153 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 ++ G+ R+ +++ + + NRR+++ V Sbjct: 154 QSMVTALGIEP-RMIEVTSHGQSNPLVPEAKGKGEAKNRRVEVTVR 198 >gi|116329778|ref|YP_799497.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332660|ref|YP_802377.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122671|gb|ABJ80564.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116127527|gb|ABJ77619.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 363 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 13/158 (8%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 ++L+ + I+ + I +I F+K+S Sbjct: 216 EPNSEKLETVKGTIAKAEPKFSWFEKKHELSSNPKFREIESKVIH------FEKNSIQIR 269 Query: 246 PETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 E L ++ + + + I GHT N R+SL RA + L +G+ Sbjct: 270 KEAKPGLNRLSRWMKEDSSIRVKIFGHTS---LEGTEAANQRVSLLRAETVRDYLAGNGI 326 Query: 305 SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 S+DR ++ + NRR+++ + + Sbjct: 327 SKDRF-EVIPKGASVPIGDNSKEEGKEMNRRVELRIRN 363 >gi|298374715|ref|ZP_06984673.1| OmpA family protein [Bacteroides sp. 3_1_19] gi|298269083|gb|EFI10738.1| OmpA family protein [Bacteroides sp. 3_1_19] Length = 658 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 34/147 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 IS + +D + PE+ L ++ ++L + I + HTD + + N Sbjct: 512 ISKPVVIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDR---KGTDQYN 568 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------------------- 324 RL+ RA S L+ G+ R+ G+ K + Sbjct: 569 ERLAQRRAQSVVDYLIAGGIEAARLEA-KGYGESVPKTINKKMAKQFDFLKEGDVLTEEF 627 Query: 325 ---------DPMNSANRRIDILVEDRQ 342 + + NRR + V Sbjct: 628 ILALPPEQQEIADQINRRTEFKVLRTN 654 >gi|296447839|ref|ZP_06889751.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b] gi|296254639|gb|EFH01754.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b] Length = 202 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F ++S+ + + V +++G+ L I GHTDA N LS RA Sbjct: 94 FARNSATLRGKDLEVARQLGKALGDEKLAGGKFLIMGHTDAR---GSDEANQALSERRAE 150 Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + +L + GV+ DR+ + G+ L+ P + NRR+ ++ Sbjct: 151 AVKHLLTTEFGVAPDRLITV-GYGETHLENPKRPFAAENRRVQVV 194 >gi|269139917|ref|YP_003296618.1| peptidoglycan-associated outer membrane lipoprotein [Edwardsiella tarda EIB202] gi|267985578|gb|ACY85407.1| peptidoglycan-associated outer membrane lipoprotein [Edwardsiella tarda EIB202] gi|304559752|gb|ADM42416.1| Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor [Edwardsiella tarda FL6-60] Length = 170 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 7/117 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 + + + + N F P+ + L L + ++ GHTD Sbjct: 57 LQMQELQKNNIVYFGLDKYDVTPDYMQELDAHAAFLRSNPSYKVTVEGHTDER---GTPE 113 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 N L RA + L GVS D+I +S + + + + NRR ++ Sbjct: 114 YNIALGERRANAVKMYLQGKGVSADQIDIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 169 >gi|86132811|ref|ZP_01051403.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85816765|gb|EAQ37951.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 368 Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 13/109 (11%) Query: 239 KSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 +S+ P ++ L + + I HTD+ A N LS RA S Sbjct: 261 TNSATLTPAAKNIIDTRLMPLLAENPGVKLEIASHTDSR---GAASSNQDLSERRAQSVA 317 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 L+ GV+ + +GF +LK ++ ++ANRR + + Sbjct: 318 NYLISKGVNNSLLVA-NGFGERKLKNRCADGVSCTERQHAANRRTEFRL 365 >gi|259417580|ref|ZP_05741499.1| OmpA/MotB [Silicibacter sp. TrichCH4B] gi|259346486|gb|EEW58300.1| OmpA/MotB [Silicibacter sp. TrichCH4B] Length = 166 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F S PE +L L A+ V++I GH D N L R Sbjct: 56 DRVLFLVDQSSISPEAQGILDGQARWLTANPAYVVTIEGHADER---GTREYNLALGARR 112 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A SA + L+ GV+ RI +S + R + + NRR Sbjct: 113 ANSAREYLISQGVAASRIQTVS-YGKERPIEICSEQSCYNKNRR 155 >gi|254452426|ref|ZP_05065863.1| OmpA domain protein [Octadecabacter antarcticus 238] gi|198266832|gb|EDY91102.1| OmpA domain protein [Octadecabacter antarcticus 238] Length = 612 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 8/151 (5%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDKSSSIPLPETIV 250 ++ L + +S + + TT + I + + F+ SS+ Sbjct: 424 IEKLGEAEEFEVSVTYVEALDPIAALPTTEECLDQIMNVTESRKITFEPSSARIAGAGAA 483 Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L I E+L + I I G+TD+ N RLS RA + L V Sbjct: 484 ILDDITEILQRCADLRIEIAGYTDSQ---GSEDGNQRLSQQRADAVLDGLRVRRVPVASF 540 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + G+ ++ + NRRI+ + Sbjct: 541 RSV-GYGEADPIADNETADGREANRRIEFSL 570 >gi|148827586|ref|YP_001292339.1| hypothetical protein CGSHiGG_05065 [Haemophilus influenzae PittGG] gi|148718828|gb|ABQ99955.1| hypothetical protein CGSHiGG_05065 [Haemophilus influenzae PittGG] Length = 153 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 7/135 (5%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 ++ + +T + + + NT F E + +L L Sbjct: 18 AACSSSNNDAAGNGVAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 77 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + + G+TD N L RA + L GV ++ +S + + Sbjct: 78 TPAAKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKP 133 Query: 321 KIASDPMNS--ANRR 333 + + NRR Sbjct: 134 AVLGHDEAAYSKNRR 148 >gi|347157|gb|AAC36901.1| protein F [Pseudomonas fluorescens] Length = 296 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 36/257 (14%), Positives = 79/257 (30%), Gaps = 7/257 (2%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 K IE FNP + + + + + + D + ++ I ++ L + Sbjct: 42 KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGNQKIKGDTGSLVAQYHFGQA 101 Query: 123 QYQ--RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 R + S+ + RD + + N + Sbjct: 102 GVDSLRPYVEGGFGHQSRTNVQADGHSGRDQTTFATVGTGVKYYFTNNLYARAGVEADYG 161 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + + A + ++ FD Sbjct: 162 LDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFD 221 Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 ++ P + ++ + + +A + + GHTD+ N +LS RA + QVL Sbjct: 222 KAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSV---GPDAYNQKLSQRRADAVKQVL 278 Query: 300 MKSGVSEDRISKISGFA 316 +K GV+ R++ + G+ Sbjct: 279 VKDGVAPSRVTAV-GYG 294 >gi|317012627|gb|ADU83235.1| flagellar motor protein MotB [Helicobacter pylori Lithuania75] Length = 257 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|260768865|ref|ZP_05877799.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio furnissii CIP 102972] gi|260616895|gb|EEX42080.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio furnissii CIP 102972] gi|315180558|gb|ADT87472.1| Peptidoglycan-associated lipoprotein [Vibrio furnissii NCTC 11218] Length = 179 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++ + +L L + ++I GH D N L RA + Sbjct: 79 FAFDNATIASDYEEMLAAHAVYLTKNPSLKVTIEGHADER---GTPEYNIALGERRAQAV 135 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + L GV D+I I + + + + NRR ++ Sbjct: 136 AKYLEALGVQADQI-AIVSYGEEKPLLLGQTEEVYAKNRRAVLV 178 >gi|254522358|ref|ZP_05134413.1| OmpA domain protein [Stenotrophomonas sp. SKA14] gi|219719949|gb|EED38474.1| OmpA domain protein [Stenotrophomonas sp. SKA14] Length = 432 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 31/228 (13%), Positives = 65/228 (28%), Gaps = 13/228 (5%) Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 G+ + +R+ + + + Q + R DL + Sbjct: 203 GNLPTEGDRRRIWSALLAVHGRQNVQGGITLDPRARAPRWLDRLIADLPQLQGDGLRLEF 262 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID----- 230 + + ++ ++ L + L + Sbjct: 263 AGSQLRIDTSQMEDAQRLAISHRLRQDFPALDMTGLWGPGLAALAQLPAQADATQRIEAL 322 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLS 288 R T F ++ ++ + + L + HTD+ A N +LS Sbjct: 323 NRTTLKFHAGTATLTGDSRQTIGAVASALRAVPAGARVEVAAHTDS---AGSATTNQQLS 379 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRI 334 RA + Q L + GV + +G+ + + D + NRRI Sbjct: 380 QLRAEAVAQALQEQGVGSAALVP-TGYGQEQPIADNRSDHGRALNRRI 426 >gi|254439344|ref|ZP_05052838.1| OmpA family protein [Octadecabacter antarcticus 307] gi|198254790|gb|EDY79104.1| OmpA family protein [Octadecabacter antarcticus 307] Length = 637 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 8/151 (5%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGI-LISIIDQRNTPMFDKSSSIPLPETIV 250 ++ L + +S + + TT + I + + F+ SS+ Sbjct: 454 IEKLGEAEEFEVSVTYVEELDPIAALPTTEECLGQIMNVTESRKIRFEPSSATIAGAGAA 513 Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L I E+L + I I G+TD+ N RLS RA + + L V Sbjct: 514 ILDDIKEILQRCADLRIEIAGYTDSQ---GSEDGNQRLSQQRADAVLEGLRVRRVPVASF 570 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + G+ ++ + NRRI+ + Sbjct: 571 RSV-GYGEADPIADNETADGREANRRIEFSL 600 >gi|197106554|ref|YP_002131931.1| OmpA family protein [Phenylobacterium zucineum HLK1] gi|196479974|gb|ACG79502.1| OmpA family protein [Phenylobacterium zucineum HLK1] Length = 186 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 38/110 (34%), Gaps = 9/110 (8%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD + +L E L + + I G+ D N L R Sbjct: 76 DRVYFDLDQHDVRTDARPLLDAQAEWLRRYPQVRVRIEGNADER---GTREYNLALGARR 132 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANR--RIDIL 337 A S L+ GV+ DRIS IS F + + NR R I+ Sbjct: 133 ANSVRDYLVNRGVTSDRISTIS-FGKEQPLDPGTTEEAYQKNRNARTAIV 181 >gi|332307349|ref|YP_004435200.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174678|gb|AEE23932.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 287 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 59/150 (39%), Gaps = 12/150 (8%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + +A ++++ + +N + V + I+ + K+S+ + Sbjct: 141 QSDRIAVGLNASNFAVPYENFAQCVSNLLPYSFDDIAYT----ILAYQKNSTDLTKYSQR 196 Query: 251 VLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L IG+ L +++ + G++D+ N LS+ RA + GV+ R Sbjct: 197 RLNMIGQYLKEDSDMELVLLDGYSDSY---GGRDMNKTLSVSRAVEIKNYFSEMGVAPQR 253 Query: 309 ISKISGFAHHRLKIASDPM--NSANRRIDI 336 I +++G R + + NRR+ I Sbjct: 254 I-EVTGHGERRHIAPNSNEMSRAKNRRVVI 282 >gi|332188277|ref|ZP_08390004.1| ompA family protein [Sphingomonas sp. S17] gi|332011673|gb|EGI53751.1| ompA family protein [Sphingomonas sp. S17] Length = 175 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 12/114 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + + E L ++ A + +RGH+D+ N R+S RA +A Sbjct: 66 FPEGGAELDREAKAALDRLAADPAVRQGHLILRGHSDSD---GDDAGNRRMSRQRAEAAR 122 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRIDILVEDRQ 342 L G++ R+ + R + + NRR++I ++ Sbjct: 123 DYLAGKGIASARMK-VIALGETRPIAPNAKPDGTDDSAGRARNRRVEIELDRAN 175 >gi|89094844|ref|ZP_01167777.1| peptidoglycan-associated lipoprotein precursor [Oceanospirillum sp. MED92] gi|89080899|gb|EAR60138.1| peptidoglycan-associated lipoprotein precursor [Oceanospirillum sp. MED92] Length = 171 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ L+K L+ + + GH D N L RA + Sbjct: 68 FDFDKSVVKAAGFADLEKHAAYLSANPSAQVVLEGHADER---GTREYNIALGERRAKAV 124 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 + L +G S +I +S F + + S NRR+++ Sbjct: 125 ARFLQVNGASGSQIETVS-FGEEKPAVLGHSEASWSQNRRVEL 166 >gi|84385524|ref|ZP_00988555.1| Outer membrane protein [Vibrio splendidus 12B01] gi|84379504|gb|EAP96356.1| Outer membrane protein [Vibrio splendidus 12B01] Length = 278 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 70/207 (33%), Gaps = 11/207 (5%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK----RKKRLQDLAKK 198 K L ++G C + ++I K+ + A ++KRL +L + Sbjct: 67 AKLHLDALIQEGARWCFPAAVVQAIEKQNRIARELQGGLLLDAANDLVIQRKRLNELEVQ 126 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + S + F + I F ++S+ P+ + L + + Sbjct: 127 LDYVTSQARCEPPKNENQFRMQLSVIEQLYDLLNVDNQFAENSTEVNPKYMGRLAEATTL 186 Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + GH DA+ N L+L RA + L G+ RI +S Sbjct: 187 LKEHKSLDLVVTGHADAT---GTEEYNDDLALGRAKQVERYLTIFGLGAQRIKAVS-VGE 242 Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342 + + NRR+ I + + Sbjct: 243 TVPLFEGESDGTRLTNRRVSIEIISPK 269 >gi|148546407|ref|YP_001266509.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1] gi|148510465|gb|ABQ77325.1| OmpA/MotB domain protein [Pseudomonas putida F1] Length = 325 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 18/229 (7%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 S + K+ ++Q K+++T + K +S+ ++ Sbjct: 23 SPDGSKEGGSSWWPFGSDKVAEQE--VKSAVTENVAKADAKSESSSRWWWPFGGDDKQAK 80 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 KI + L + K+ + + + + T D+ N + Sbjct: 81 GPVVPKIDQKATQAWLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL 140 Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 P ++ + ++ + + + + GH D+ A N +LSL+RA S Sbjct: 141 ---------PMSLGPITRVAKTVEGDPKTAVLVLGHADS---SGAAVANQKLSLERAASV 188 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + SG+ DR+ + G + A+D NRR+++L+ + Sbjct: 189 SAIFRLSGLQRDRL-TLKGMGSVMPRAANDSAEGRALNRRVEMLLTPQN 236 >gi|307637506|gb|ADN79956.1| Flagellar motor rotation protein [Helicobacter pylori 908] gi|325996095|gb|ADZ51500.1| Flagellar motor rotation protein [Helicobacter pylori 2018] gi|325997691|gb|ADZ49899.1| Flagellar motor rotation protein [Helicobacter pylori 2017] Length = 257 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G S++ ++ +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLIKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|254491000|ref|ZP_05104181.1| OmpA family protein [Methylophaga thiooxidans DMS010] gi|224463513|gb|EEF79781.1| OmpA family protein [Methylophaga thiooxydans DMS010] Length = 171 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 236 MFDKSSSIPLPETIVVLQ-KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F + E+ V Q ++L S + I GHTD + N LSL RA Sbjct: 69 FFLLDKTEFTAESRVESQEIYQKILDRSFGEVVITGHTDT---SASSAYNEALSLRRAQK 125 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 Q L+ GV D + +IS +RL + D + NRR++I Sbjct: 126 VRQQLIDFGVPADSV-RISAEGEYRLLVSTPDDTVEVRNRRVEI 168 >gi|218262635|ref|ZP_03477017.1| hypothetical protein PRABACTJOHN_02696 [Parabacteroides johnsonii DSM 18315] gi|218223264|gb|EEC95914.1| hypothetical protein PRABACTJOHN_02696 [Parabacteroides johnsonii DSM 18315] Length = 663 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 34/147 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 IS +D + PE+ L ++ ++L + I + HTD + + N Sbjct: 517 ISKPVVIENIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDR---KGSEQYN 573 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD------------------- 325 RL+ RA S L+ G+++DR+ G+ K + Sbjct: 574 ERLAQRRAQSVVDYLIAGGIAQDRLEA-KGYGESVPKTINKKMAKNYDFLNEGDVLTEEF 632 Query: 326 ----PMNSA------NRRIDILVEDRQ 342 NRR + V Sbjct: 633 IDKLTPEQQEIADQINRRTEFKVLRTN 659 >gi|255036435|ref|YP_003087056.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254949191|gb|ACT93891.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 464 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + + + + L I ++ + +GHTD + N LS R + Sbjct: 359 FSQGTEVLEDSALSDLDSIVSYFQKRQDLRLVLKGHTDNT---GSFEKNLELSNKRVETV 415 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L+ G+ +RI + SG+ + + + + NRR+++ Sbjct: 416 KAYLIGKGIIAERI-EGSGYGSAQPRQMNQTEATKKSNRRVEV 457 >gi|298372620|ref|ZP_06982610.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275524|gb|EFI17075.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058] Length = 681 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 5/93 (5%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + ++ E+ L + ++L + + + HTD+ N LS Sbjct: 540 KMENIFYEFGKWNITKESEAELNNLVKLLEDNPNITIELSAHTDSV---GTDASNIELSQ 596 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 RA SA + L+ +G+++DR++ G+ ++ I Sbjct: 597 KRANSAVEYLIGAGIAKDRLTA-KGYGENKPVI 628 >gi|315180802|gb|ADT87716.1| sodium-type flagellar protein MotY [Vibrio furnissii NCTC 11218] Length = 294 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 83/297 (27%), Gaps = 14/297 (4%) Query: 48 FLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107 F+ + + + +Y ++ + E + Sbjct: 9 FVALSACSTFAASALEK--RYVATPQQSSWQMATNTPLECRLVHPIPNYGEAVFTSHASK 66 Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 K ++D ++ + + + + + + ++ + Sbjct: 67 KINLDFELKMRRPMGETRNVSLVSMPPVWRPGESADRITNIQFFKQFDGYVGGQTAWALL 126 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 ++ E P S + + ++ + +S+ L + V + IS Sbjct: 127 SELEQGRYPTFSYQDWQSRDQRIEVA-----LSAVLFQPQYNAFSDCVASLLPYSFEDIS 181 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 S + L +I E + ++ ++ + T L Sbjct: 182 FTILHYD---RGDSVELNKASQKRLAQIAEYIRYNPDIDLVLVSTYTDSTDGRNES-QSL 237 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 S RA S + G+ DRI ++ G+ R + NRR+ I + Q Sbjct: 238 SDKRAESLQKYFESLGLPSDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293 >gi|254492390|ref|ZP_05105562.1| OmpA family protein [Methylophaga thiooxidans DMS010] gi|224462282|gb|EEF78559.1| OmpA family protein [Methylophaga thiooxydans DMS010] Length = 281 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 36/298 (12%), Positives = 89/298 (29%), Gaps = 26/298 (8%) Query: 47 FFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHI 106 FF +++ + + +A P + + + Sbjct: 6 FFALLFAL-PVSAEQFQA------PVTDTQWQVIESPLECSLMQSIPGFGEAGFYRRNGG 58 Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 + I ++ KQ L +++ S + + + +++ Sbjct: 59 ALSL--SFISQSHAAKQNNVLFQIAEAPWQNKEQRQTLTSQPTELGQTRFSLNGVLAQQA 116 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 +++ + P + ++ +S+ + + + T + Sbjct: 117 LSQMQEGRFPVIEYPSQSYS------DNVTVMLSTVKFNDSFASFQQCLSHLHPDTFGEV 170 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDN 284 + T F+ + P L ++ E + S I I HTD R N Sbjct: 171 ----NKLTVYFEIEQATLTPVAKKALTRLAEYVKVDDSINQIKIASHTDN---HGRRRLN 223 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 LS RA S + L+ +++ I+ + + ++ + NRR +I + Sbjct: 224 EPLSDARALSIKRFLITEFEIPEQLISINSYVEAKPTASNKTPLGRAKNRRAEITLVR 281 >gi|126176195|ref|YP_001052344.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155] gi|160877206|ref|YP_001556522.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195] gi|304412239|ref|ZP_07393848.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|307306983|ref|ZP_07586723.1| OmpA/MotB domain protein [Shewanella baltica BA175] gi|125999400|gb|ABN63475.1| OmpA/MotB domain protein [Shewanella baltica OS155] gi|160862728|gb|ABX51262.1| OmpA/MotB domain protein [Shewanella baltica OS195] gi|304349505|gb|EFM13914.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|306910561|gb|EFN40991.1| OmpA/MotB domain protein [Shewanella baltica BA175] gi|315269410|gb|ADT96263.1| OmpA/MotB domain protein [Shewanella baltica OS678] Length = 202 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + +F S+ PE ++++ L +I GHT + N LS Sbjct: 74 KEINILFPNDSAYIAPEYYPQIEEVAIFLRQYPTTKVTIEGHTSRT---GTDERNAVLSQ 130 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 DRA + VL + + R++ I G+ R + ++ NRR+ Sbjct: 131 DRANAVTAVLAERFSIDRSRLTAI-GYGSSRPVVLEQTPDAEIRNRRV 177 >gi|255261508|ref|ZP_05340850.1| OmpA family domain protein [Thalassiobium sp. R2A62] gi|255103843|gb|EET46517.1| OmpA family domain protein [Thalassiobium sp. R2A62] Length = 308 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS L + E L+ + + GHTD+ N LS RA S Sbjct: 203 FQVGSSNLGDAAFASLDLLAEYLSANPNKTIALVGHTDS---SGPLNGNIALSKRRASSV 259 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L + G+ ++ G + + NRR++++V + Sbjct: 260 LDRLTRDYGIPRRQMEA-EGMGYLSPLSTNLTQEGRDLNRRVEVIVTSTE 308 >gi|127512457|ref|YP_001093654.1| OmpA domain-containing protein [Shewanella loihica PV-4] gi|126637752|gb|ABO23395.1| OmpA domain protein [Shewanella loihica PV-4] Length = 180 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + + FD S + VL GE L + I GH D N L Sbjct: 74 KEHIIYFDFDRSSVSSDFSEVLNAHGEYLLEHPNVRVMIEGHADER---GTPEYNIALGE 130 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + + L GV ++S +S + + + +D + NRR ++ Sbjct: 131 RRAKAVAKYLQSMGVLPSQMSIVS-YGEEKPQDFSRTDDGFAKNRRAVLV 179 >gi|110678461|ref|YP_681468.1| OmpA family domain-containing protein [Roseobacter denitrificans OCh 114] gi|109454577|gb|ABG30782.1| OmpA family domain protein [Roseobacter denitrificans OCh 114] Length = 221 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 5/110 (4%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLS 288 T FD S+ E + +I E L + + G TDA N +L Sbjct: 21 DIGTINFDFDSAELDAEAQAKIVEIAEQLKENPSYKPTVLIGFTDAVGGVG---YNDQLG 77 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 L RA + L++ GVS DRI +S L ++ NRR+ + + Sbjct: 78 LRRANAVSAALLEQGVSVDRIGTVSSRGERELLVSVAGPERLNRRVTVTL 127 >gi|294141706|ref|YP_003557684.1| OmpA family protein [Shewanella violacea DSS12] gi|293328175|dbj|BAJ02906.1| OmpA family protein [Shewanella violacea DSS12] Length = 335 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 14/119 (11%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWR 286 I N FD S + P +L ++ L + +G+TDA N + Sbjct: 214 IPAMTNAVHFDFDSEV--PLQTHILVEVARHLNQYPSASVVLQGYTDAVGPSG---YNLK 268 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI-----DILV 338 LS RA S L K VS+ +I I ++ + + NRR+ +I V Sbjct: 269 LSKRRAVSVAAYLKKLEVSDAQI-SIEALGETHPELDNITEEHRANNRRVYISIPEITV 326 >gi|238749729|ref|ZP_04611234.1| Outer membrane protein A [Yersinia rohdei ATCC 43380] gi|238712384|gb|EEQ04597.1| Outer membrane protein A [Yersinia rohdei ATCC 43380] Length = 358 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L+ + + G D N LS Sbjct: 230 KSDVLFAFNKSTLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+I+ G + P + +RR++I Sbjct: 287 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|62999040|gb|AAY25026.1| major outer membrane protein [Aeromonas hydrophila] Length = 344 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 18/125 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 + +F PE + L + + + + G+TD N +LS Sbjct: 220 NSDVLFAFGKDSLKPEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDAYNQKLS 276 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDIL 337 RA + L+ G++ ++ + G + + +RRI++ Sbjct: 277 EARARTVANFLVSKGMAASKV-AVEGRGEANPVTGTKCNGVKAKAQLISCLAPDRRIEVR 335 Query: 338 VEDRQ 342 V Q Sbjct: 336 VSGVQ 340 >gi|304395220|ref|ZP_07377104.1| OmpA/MotB domain protein [Pantoea sp. aB] gi|304357473|gb|EFM21836.1| OmpA/MotB domain protein [Pantoea sp. aB] Length = 157 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + S P + +Q + + LA + E + I GHTD N +LSL R Sbjct: 49 DKILFGVNESELTPSSKSNIQGMAKNLASTGIEHVRIDGHTDNY---GKPDYNQQLSLKR 105 Query: 292 AYSA-YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A + Q + + I G +++ + NRR+ I++ Sbjct: 106 ANAVAAQWAEGASIPRGNIVT-RGLGMSAPVTSNNSAQGRAQNRRVAIVITAP 157 >gi|86145932|ref|ZP_01064260.1| putative outer membrane protein [Vibrio sp. MED222] gi|85836387|gb|EAQ54517.1| putative outer membrane protein [Vibrio sp. MED222] Length = 204 Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 8/120 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285 S ++ +F S+ P + ++++ L I ++G+ A N Sbjct: 76 SSEEKDLHILFANDSAEIKPVFLSQIRQMAAFLKRYENTSIQLQGYASKV---GNAEHNL 132 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAH--HRLKIASDPMNSANRRIDILVEDRQG 343 +LS RA + + L+ +G+ R + G+ R ++ ++ NR++ V +G Sbjct: 133 KLSEKRADNVRRALISNGIPPSRAYTV-GYGDVGFR-DNDTETNHALNRKVVASVVGFKG 190 >gi|259417800|ref|ZP_05741719.1| OmpA/MotB [Silicibacter sp. TrichCH4B] gi|259346706|gb|EEW58520.1| OmpA/MotB [Silicibacter sp. TrichCH4B] Length = 345 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 8/106 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +S+ L+++ E L + I + GHTD N LS RA S Sbjct: 241 FDTASTQMGEGPFDSLRQLAEFLDQNKSATILLVGHTDTV---GGLEGNIALSRRRAISV 297 Query: 296 YQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + L + G+ RI +++G + + NRR++ ++ Sbjct: 298 RERLTTRYGIDGGRI-QVAGAGYMAPLAPNTTETGRETNRRVEAVL 342 >gi|149927733|ref|ZP_01915985.1| outer membrane protein [Limnobacter sp. MED105] gi|149823559|gb|EDM82789.1| outer membrane protein [Limnobacter sp. MED105] Length = 174 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + + FD S E ++Q + L + + +G+TD A N L Sbjct: 68 KRSVYFDYDSYTVKSEYRELVQNHAKYLVANPNRKVVVQGNTDER---GGAEYNLALGQR 124 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + +++ GV E +I +S F + K +++ + NRR DI+ Sbjct: 125 RADAVKTLMLALGVKEGQIETVS-FGKEKPKATGSNEAAYAENRRSDIV 172 >gi|332673379|gb|AEE70196.1| flagellar motor protein MotB [Helicobacter pylori 83] Length = 255 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 67.3 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|325518447|gb|EGC98149.1| OOP family OmpA-OmpF porin [Burkholderia sp. TJI49] Length = 207 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD + P L ++ + + + G+TD + N RLSL Sbjct: 81 QADALFDFDKATLKPLGKQKLDELASKIEGMNTEVVVATGYTDRI---GSDKYNDRLSLR 137 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339 RA + L+ GV ++I G N N RR+++ V Sbjct: 138 RAQAVKSYLVSKGVPANKIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 194 Query: 340 DRQ 342 Q Sbjct: 195 GTQ 197 >gi|299773233|gb|ADJ38691.1| outer membrane protein P5 [Haemophilus parasuis] Length = 368 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRI---D 335 RA + ++ GV+ ++ + G+ + + +RR+ + Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVNASE 357 Query: 336 ILVEDRQ 342 I V+ + Sbjct: 358 IQVQGSK 364 >gi|299773231|gb|ADJ38690.1| outer membrane protein P5 [Haemophilus parasuis] Length = 370 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 244 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 300 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRI---D 335 RA + ++ GV+ ++ + G+ + + +RR+ + Sbjct: 301 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGNTCDAVKGRKALIVCLAPDRRVIHPE 359 Query: 336 ILVEDRQ 342 I V+ + Sbjct: 360 IQVQGSK 366 >gi|332663673|ref|YP_004446461.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332332487|gb|AEE49588.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 846 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 35/155 (22%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTD 273 V E I + ++ + PE+ L + +++ E+ I + HTD Sbjct: 527 VKEEPEYDTITTEQPILLDNIVYGYNDDKITPESEPDLNLVLDLMKKYPEMVIELSSHTD 586 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK------------ 321 +R N LS RA SA + L++ G++ RI G+ + K Sbjct: 587 ---YRGRDEYNQDLSQRRAESARKWLLQKGIASSRIQA-KGYGEAQPKPVNEKMASEFLF 642 Query: 322 -----------IAS-------DPMNSANRRIDILV 338 I + + + NRR + + Sbjct: 643 MTPKDTLTQDFIDNLATKEEQEAAHQLNRRTEFKI 677 >gi|301308400|ref|ZP_07214354.1| OmpA family protein [Bacteroides sp. 20_3] gi|300833870|gb|EFK64486.1| OmpA family protein [Bacteroides sp. 20_3] Length = 658 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 34/147 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 IS + +D + PE+ L ++ ++L + I + HTD + + N Sbjct: 512 ISKPVVIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDR---KGTDQYN 568 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------------------- 324 RL+ RA S L+ G+ R+ G+ K + Sbjct: 569 ERLAQRRAQSVVDYLIAGGIEAARLEA-KGYGESVPKTINKKMAKQFDFLKEGDVLTEEF 627 Query: 325 ---------DPMNSANRRIDILVEDRQ 342 + + NRR + V Sbjct: 628 ILALPPEQQEIADQINRRTEFKVLRTN 654 >gi|256824209|ref|YP_003148169.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Kytococcus sedentarius DSM 20547] gi|256687602|gb|ACV05404.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Kytococcus sedentarius DSM 20547] Length = 437 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F SS E+ V +IGE LA + + GHTD+ N RLS RA Sbjct: 338 FPSSSDALYGESAVNAARIGEKLAGCDFDVVVVGHTDSV----GGEVNERLSAFRAEKIA 393 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 Q L+ +GV DRI + + + + +++ + NRR++ILV+ Sbjct: 394 QALVVAGVDFDRIQQSNA-SASQPIASNETEDGRAKNRRVEILVK 437 >gi|208434727|ref|YP_002266393.1| flagellar motor rotation protein [Helicobacter pylori G27] gi|208432656|gb|ACI27527.1| flagellar motor rotation protein [Helicobacter pylori G27] Length = 257 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G S++ ++ +F+ + S + ++ L++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYLERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLTKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|150010324|ref|YP_001305067.1| outer membrane protein OmpA family protein [Parabacteroides distasonis ATCC 8503] gi|255012413|ref|ZP_05284539.1| outer membrane protein OmpA family protein [Bacteroides sp. 2_1_7] gi|262382396|ref|ZP_06075533.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B] gi|149938748|gb|ABR45445.1| outer membrane protein OmpA family protein [Parabacteroides distasonis ATCC 8503] gi|262295274|gb|EEY83205.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B] Length = 658 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 34/147 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 IS + +D + PE+ L ++ ++L + I + HTD + + N Sbjct: 512 ISKPVVIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDR---KGTDQYN 568 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------------------- 324 RL+ RA S L+ G+ R+ G+ K + Sbjct: 569 ERLAQRRAQSVVDYLIAGGIEAARLEA-KGYGESVPKTINKKMAKQFDFLKEGDVLTEEF 627 Query: 325 ---------DPMNSANRRIDILVEDRQ 342 + + NRR + V Sbjct: 628 ILALPPEQQEIADQINRRTEFKVLRTN 654 >gi|308062136|gb|ADO04024.1| flagellar motor protein MotB [Helicobacter pylori Cuz20] gi|308063396|gb|ADO05283.1| flagellar motor protein MotB [Helicobacter pylori Sat464] Length = 255 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ L++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDAINQDMMLYLERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLDKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|260582095|ref|ZP_05849889.1| outer membrane protein P5 [Haemophilus influenzae NT127] gi|260094727|gb|EEW78621.1| outer membrane protein P5 [Haemophilus influenzae NT127] Length = 350 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 16/118 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P+ L + ++ +++ G+TD N +LS +RA S Sbjct: 237 FAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGYTDRI---GSDAFNVKLSQERADSV 293 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILVEDRQ 342 + GV+ D IS +G+ D + +RR++I V + Sbjct: 294 ANYFVAKGVAADAISA-TGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAVNGTK 350 >gi|145636351|ref|ZP_01792020.1| outer membrane protein P6 precursor [Haemophilus influenzae PittHH] gi|145270516|gb|EDK10450.1| outer membrane protein P6 precursor [Haemophilus influenzae PittHH] Length = 153 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 7/135 (5%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 ++ +T + + + NT F E + +L L Sbjct: 18 AACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 77 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + + G+TD N L RA + L GV ++ +S + + Sbjct: 78 TPAAKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKP 133 Query: 321 KIASDPMNS--ANRR 333 + + NRR Sbjct: 134 AVLGHDEAAYSKNRR 148 >gi|320325666|gb|EFW81728.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. B076] Length = 381 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 A+ + + + E + + + V + Sbjct: 14 AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGAAAKAPAPSLAPAPVAKAAAAPAAPAA 73 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 ++ S+ K D K + + + + + K+ Sbjct: 74 GAENSAPWYWPFGSKDKAQAKPDAVADKTADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + L A E + I+ F+ Sbjct: 134 PKALPMPDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190 Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 L P T+ + ++ +V+ + I GH D N ++S +RA S + Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 SG+ +R+S+ G + A+D + NRR++IL Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284 >gi|255008683|ref|ZP_05280809.1| OmpA family membrane protein [Bacteroides fragilis 3_1_12] gi|313146419|ref|ZP_07808612.1| outer membrane protein [Bacteroides fragilis 3_1_12] gi|313135186|gb|EFR52546.1| outer membrane protein [Bacteroides fragilis 3_1_12] Length = 224 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 6/112 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + +F +SS + L + +L ++I GHTD N ++S + Sbjct: 108 PSGILFAFNSSALSAASKQSLAEFANILKEDPTVDVAIIGHTDKV---GTYEANQKVSSN 164 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 RAY+ L GV + K+ G + + ++ NRR++I + + Sbjct: 165 RAYAVENYLQSCGVKPYQFKKVEGVGYSQ-YNEAETPE-QNRRVEIFMYASE 214 >gi|171061026|ref|YP_001793375.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6] gi|170778471|gb|ACB36610.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6] Length = 558 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 12/164 (7%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSS 242 A +R+ D I V L + + + F + Sbjct: 381 AASDEAQRIADAQGFIGQLPDASEPGAAAVAVADLPPAYRALTDGGRRLSVNLRFVAGAE 440 Query: 243 IPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 + + +I +L E + + G +DA N RLS RA + L Sbjct: 441 GLDNKARRDMGRIVRLLERRLKQDERVMLLGFSDAL---GGDCANQRLSQQRATAVATEL 497 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 GV + GF +++ NRR+++ + + Sbjct: 498 ATYGVRPA---VVHGFGSAAPIASNETGAGRERNRRVEVWLTSK 538 >gi|149371350|ref|ZP_01890836.1| OmpA/MotB [unidentified eubacterium SCB49] gi|149355488|gb|EDM44047.1| OmpA/MotB [unidentified eubacterium SCB49] Length = 247 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 9/113 (7%) Query: 228 IIDQRNTPMFDKSSSIPLPE-TIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 I + +T F ++ + + L KI L + ++ I GHTD+ N Sbjct: 136 IHIKNHTIEFKYNAPQITDDHSFKQLDKIVSYLKNDPQITVKITGHTDSI---GSDNFNK 192 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 LSL RA + + + + RI I+G K + S NRR++I + Sbjct: 193 SLSLKRANAVKRYFLSKKIDTRRII-INGMGEKSPKSK---LASQNRRVEIEL 241 >gi|149193985|ref|ZP_01871083.1| OmpA/MotB [Caminibacter mediatlanticus TB-2] gi|149135938|gb|EDM24416.1| OmpA/MotB [Caminibacter mediatlanticus TB-2] Length = 196 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 61/176 (34%), Gaps = 15/176 (8%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI-VKGVLFETTRTGI 224 EN + + M ++++ + +++ + + +N+ V + Sbjct: 21 KQPNLENAQMQENNATVQEQMTNQQQVVTQPETVNTENANVQEENLTATTVTVSKMQNNQ 80 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIAR 282 + FD P+ ++K+ +++ + ++ G+ D Sbjct: 81 EFAKKLASIVVYFDFDKYNIRPDQWPKVEKLAKLIKKNPSNYTVRIEGNCDEW---GTEE 137 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-----NRR 333 N+ L L RA S L+K GV +++ IS + ++ NRR Sbjct: 138 YNYALGLKRANSVKNALIKLGVDPKKLTIIS-YGELNPVC---TAHAKWCWRLNRR 189 >gi|186475502|ref|YP_001856972.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815] gi|184191961|gb|ACC69926.1| OmpA/MotB domain protein [Burkholderia phymatum STM815] Length = 215 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 18/115 (15%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 +FD +I P L + + + + G+TD + N RLSL RA + Sbjct: 101 LFDFDKAILKPAGKEKLDDLASKIQGLNLEVVVATGYTDRI---GSDKYNDRLSLRRAQA 157 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338 L+ G+ +RI G N N RR+++ V Sbjct: 158 VKAYLVSKGIEANRIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209 >gi|108563226|ref|YP_627542.1| flagellar motor protein MotB [Helicobacter pylori HPAG1] gi|107836999|gb|ABF84868.1| flagellar motor rotation protein [Helicobacter pylori HPAG1] Length = 257 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 AIIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDSINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|217976969|ref|YP_002361116.1| peptidoglycan-associated lipoprotein [Methylocella silvestris BL2] gi|217502345|gb|ACK49754.1| peptidoglycan-associated lipoprotein [Methylocella silvestris BL2] Length = 169 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 10/163 (6%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + + AK + + L + G + +++ D+ F+ SS Sbjct: 13 AAVLGAALAISACAKNPAEDPNALASSAGRGGPAIPGSPQDFAVNVGDR---VFFESDSS 69 Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 L K L + ++ GH D N+ L RA +A L+ Sbjct: 70 ELSSTAQATLDKQARWLRQYAKANFTVEGHADER---GTREYNFALGARRAEAAKAYLVA 126 Query: 302 SGVSEDRISKISGFAHHRLKIA-SD-PMNSANRRIDILVEDRQ 342 G+ I IS + R +D S NRR ++ Q Sbjct: 127 RGIPAAGIHTIS-YGKERPVAVCNDISCWSQNRRAVTVLAGSQ 168 >gi|256839169|ref|ZP_05544679.1| outer membrane protein OmpA family protein [Parabacteroides sp. D13] gi|256740088|gb|EEU53412.1| outer membrane protein OmpA family protein [Parabacteroides sp. D13] Length = 658 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 48/147 (32%), Gaps = 34/147 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 IS + +D + PE+ L ++ ++L + I + HTD + + N Sbjct: 512 ISKPVVIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDR---KGTDQYN 568 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------------------- 324 RL+ RA S L+ G+ R+ G+ K+ + Sbjct: 569 ERLAQRRAQSVVDYLIAGGIEAARLEA-KGYGESVPKMINKKMAKQFDFLKEGDVLTEEF 627 Query: 325 ---------DPMNSANRRIDILVEDRQ 342 + + NRR + V Sbjct: 628 ILALPPEQQEIADQINRRTEFKVLRTN 654 >gi|160898836|ref|YP_001564418.1| peptidoglycan-associated lipoprotein [Delftia acidovorans SPH-1] gi|160364420|gb|ABX36033.1| peptidoglycan-associated lipoprotein [Delftia acidovorans SPH-1] Length = 180 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 7/105 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S + + ++ L S+ I GHTD N L RA Sbjct: 77 VYFDFDSYVVKADAQPQIEAHARFLKASSARKVQIEGHTDER---GGREYNLALGQKRAE 133 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 + + L GVS+ ++ +S + + + + NRR ++ Sbjct: 134 AVRRSLGLLGVSDAQMEAVS-YGKEKPAAEGHSEDAYAQNRRAEL 177 >gi|114799403|ref|YP_759662.1| OmpA family protein [Hyphomonas neptunium ATCC 15444] gi|114739577|gb|ABI77702.1| ompA family protein [Hyphomonas neptunium ATCC 15444] Length = 282 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 7/117 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 + + F ++ P ++ ++ +G + A I I HTD N R Sbjct: 170 VTSKDRVIQFGAGNANISPVSLPLIDALGGIAALCRAFEIEIGAHTDTR---GADDYNQR 226 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 +S +RA + L+ ++E+ ++ + G+ + + NRR V+ R Sbjct: 227 VSQERADAIRAYLLGKELAEETLTAV-GYGETQPIDTGSTAEAHARNRRTVFTVKQR 282 >gi|30314412|gb|AAP15415.1| outer membrane lipoprotein precursor [Burkholderia vietnamiensis] Length = 150 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E +LQ+ + L + + I+G+TD + N L RA + Sbjct: 48 FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + NRR D++ Sbjct: 105 RRAMALLGVNDSQMETVS-LGKEKPQATGHDETSWAQNRRADLV 147 >gi|313497490|gb|ADR58856.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1] Length = 325 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 18/229 (7%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 S + K+ ++Q K+++T + K +S+ ++ Sbjct: 23 SPDGSKEGGSSWWPFGSDKVAEQE--VKSAVTENVAKADAKSESSSRWWWPFGGDDKQAK 80 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 KI + L + K+ + + + + T D+ N + Sbjct: 81 GPVVPKIDQKATQAWLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL 140 Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 P ++ + ++ + + + + GH D+ A N +LSL+RA S Sbjct: 141 ---------PMSLGPITRVAKTVEGDPKTAVLVLGHADS---SGAAVANQKLSLERAASV 188 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + SG+ DR+ + G + A+D NRR+++L+ + Sbjct: 189 SAIFRLSGLQRDRL-TLKGMGSVMPRAANDSAEGRALNRRVEMLLTPQN 236 >gi|260431085|ref|ZP_05785056.1| OmpA family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260414913|gb|EEX08172.1| OmpA family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 209 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 4/88 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ +L + + E + GHTDA N+ L L RA + Sbjct: 65 FAFDSAQLDASAQRILLQQANWIKQFPEARFRVYGHTDAV---GSQSYNYNLGLRRANAV 121 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA 323 L++ G+S R+ + F R +A Sbjct: 122 VNFLVQQGISRSRLEALVSFGKTRPLVA 149 >gi|237807905|ref|YP_002892345.1| OmpA domain-containing protein transmembrane region-containing protein [Tolumonas auensis DSM 9187] gi|237500166|gb|ACQ92759.1| OmpA domain protein transmembrane region-containing protein [Tolumonas auensis DSM 9187] Length = 341 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPE---TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + S P + L + L + I + G+TD N +LS Sbjct: 217 SDVLFDFNKSTLKPAGVTALSQLYNQIQTLEMDDKNIVVYGYTDRI---GSDGYNLKLSQ 273 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 DRA + L G+S RI+ + G + + +RR++I V Sbjct: 274 DRAKTVSDFLTTKGLSATRITAV-GRGEADPVSPASCNAIKAKKDLIVCLAPDRRVNIEV 332 Query: 339 EDRQ 342 + + Sbjct: 333 KGTK 336 >gi|325279496|ref|YP_004252038.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324311305|gb|ADY31858.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712] Length = 782 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 42/136 (30%), Gaps = 34/136 (25%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + PE L+++ +L + + + HTD N LS RA + Sbjct: 544 FDVAKWELRPEARQNLEELLTILEDNPNITIELSAHTD---MVGNDEANRILSEHRARAV 600 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS-----------------------------DP 326 L+ GV DR+ G+ + + + + Sbjct: 601 VDYLIGKGVYWDRLEA-KGYGETQPRQINEKDAREYPFFKVGEVLNERFFGRLRGEQRET 659 Query: 327 MNSANRRIDILVEDRQ 342 NRRI+ V Sbjct: 660 ALQLNRRIEFKVLRTN 675 >gi|221196399|ref|ZP_03569446.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans CGD2M] gi|221203071|ref|ZP_03576090.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans CGD2] gi|221177005|gb|EEE09433.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans CGD2] gi|221182953|gb|EEE15353.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans CGD2M] Length = 163 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + + FD S PE +LQ L + I+G+TD + N L Sbjct: 57 KRSVYFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDER---GTSEYNLALGQR 113 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 R+ + L GV ++ +S + + + NRR D++ Sbjct: 114 RSQAVMSALETLGVPASQLEAVS-LGKEKPVALGHDEAAWAQNRRADLV 161 >gi|330984878|gb|EGH82981.1| OmpA family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 381 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 A+ + + + E + + V + Sbjct: 14 AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGAAAKAPAPSPAPAPVAKAAAAPAAPAA 73 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 ++ S+ + K D K + + + + + K+ Sbjct: 74 GAENSTPWYWPFGSKDNAQAKPDAVADKPADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + L A E + I+ F+ Sbjct: 134 PKALPMPDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190 Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 L P T+ + ++ +V+ + I GH D N ++S +RA S + Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 SG+ +R+S+ G + A+D + NRR++IL Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284 >gi|312129228|ref|YP_003996568.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132] gi|311905774|gb|ADQ16215.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132] Length = 705 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 8/112 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 FD+S + E+ V L +I +++ +++ + GHTD A N++L+ R Sbjct: 597 REVYFDQSKAELRQESFVELDRIKKIMMEHPDMVILLEGHTDNQ---GDANLNFKLAEQR 653 Query: 292 AYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 + L++ G + E+RI ++ + +R + + NRR++ + Sbjct: 654 ILNVKNYLIEDGQIKEERI-QLKSWGQYRPLVKNTTEEERRKNRRVEFTILK 704 >gi|309244385|gb|ADO52197.1| OprL [Pseudomonas sp. AF32] Length = 156 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 4/89 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 66 FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325 + L+ GVS ++ +S + R + Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGN 150 >gi|238789280|ref|ZP_04633067.1| Outer membrane protein A [Yersinia frederiksenii ATCC 33641] gi|238722612|gb|EEQ14265.1| Outer membrane protein A [Yersinia frederiksenii ATCC 33641] Length = 357 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L+ + + G D N LS Sbjct: 229 KSDVLFAFNKSTLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 285 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ ++I+ G + P + +RR++I Sbjct: 286 QRRADSVRDYLVSKGIPAEKITA-RGEGQANPVTGNTCDNVKPRAALIDCLAPDRRVEIE 344 Query: 338 VED 340 V+ Sbjct: 345 VKG 347 >gi|115522932|ref|YP_779843.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115516879|gb|ABJ04863.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53] Length = 219 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD +S+ + + + +G+ L++ + GHTDA N LS RA Sbjct: 110 FDYNSANISAKALKAVDALGKALSNPDLKGSTFVVAGHTDAV---GSEPYNQDLSERRAD 166 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + + L+ G++ + + G+ +LK AS P NRR+ ++ Sbjct: 167 AIKRYLVDKFGIAGTDLVTV-GYGESKLKDASAPTAGVNRRVQVV 210 >gi|298717317|ref|YP_003729959.1| OmpA-family outer membrane protein YfiB [Pantoea vagans C9-1] gi|298361506|gb|ADI78287.1| Putative OmpA-family outer membrane protein precursor yfiB [Pantoea vagans C9-1] Length = 157 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + S P + + +Q + + LA + + + I GHTD N +LSL R Sbjct: 49 DKILFGVNESELTPSSKLTIQGMAKNLASTGIKHVRIDGHTDNY---GKPDYNQQLSLKR 105 Query: 292 AYSA-YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A + Q + + + I G +++ + NRR+ I++ Sbjct: 106 ANAVAAQWAEGAAIPRENIVT-RGLGMSSPVASNNSAQGRAQNRRVAIVITAP 157 >gi|120599218|ref|YP_963792.1| OmpA domain-containing protein [Shewanella sp. W3-18-1] gi|146292708|ref|YP_001183132.1| OmpA domain-containing protein [Shewanella putrefaciens CN-32] gi|120559311|gb|ABM25238.1| OmpA domain protein [Shewanella sp. W3-18-1] gi|145564398|gb|ABP75333.1| OmpA domain protein [Shewanella putrefaciens CN-32] gi|319426012|gb|ADV54086.1| peptidoglycan-associated lipoprotein [Shewanella putrefaciens 200] Length = 178 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 35/108 (32%), Gaps = 7/108 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 + FD S E +L+ G L V I GH D N L R Sbjct: 74 HIIYFDFDRSEVQTEFAAILEAHGTYLVEHPSVRVLIEGHADER---GTPEYNIALGERR 130 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 A + + L GV ++ + + + S NRR ++ Sbjct: 131 AKAVAKYLQGMGVQPSQM-SVVSYGEEKPLDFSRTDEGFGKNRRAVLV 177 >gi|315223632|ref|ZP_07865486.1| outer membrane protein A [Capnocytophaga ochracea F0287] gi|314946413|gb|EFS98408.1| outer membrane protein A [Capnocytophaga ochracea F0287] Length = 340 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 12/113 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + + V L KI L + I+I+ HTD+ N L+ +A S Sbjct: 232 FNYGRTNIRYDASVQLAKIVAFLEANPTVKIAIKVHTDSR---GEDGYNMNLTETQAQSI 288 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341 YQ L+ G+S +R++ G+ +L S+ + AN+R++ ++ ++ Sbjct: 289 YQWLVSKGISPNRLTA-KGYGETQLVNGCENGVPCSEEEHQANKRVEFIIIEK 340 >gi|256820532|ref|YP_003141811.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256582115|gb|ACU93250.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271] Length = 340 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 12/113 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + + V L KI L + I+I+ HTD+ N L+ +A S Sbjct: 232 FNYGRTNIRYDASVQLAKIVAFLEANPTVKIAIKVHTDSR---GEDGYNMNLTETQAQSI 288 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341 YQ L+ G+S +R++ G+ +L S+ + AN+R++ ++ ++ Sbjct: 289 YQWLVSKGISPNRLTA-KGYGETQLVNGCENGVPCSEEEHQANKRVEFIIIEK 340 >gi|254780953|ref|YP_003065366.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62] gi|254040630|gb|ACT57426.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62] Length = 190 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 10/146 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + G++ I I F + + +LQ I + Sbjct: 47 LDKAEDEFQMQLQDTGIVVSRIGDMITCYI---PVHVSFVS-EVFLEKKFLPMLQLIATI 102 Query: 259 LAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + I+ HTD+ ++N +S +RA L++ GVS +R + GFA+ Sbjct: 103 LNKFPSTVIAIQSHTDSI---GTLKNNLLISQERADVIKSYLIQRGVSSNRFISVRGFAY 159 Query: 318 HRLKIASDP--MNSANRRIDILVEDR 341 +D N+RI+I + R Sbjct: 160 KYPIDTNDTKVGRQNNQRIEIQIFPR 185 >gi|145579534|pdb|2HQS|H Chain H, Crystal Structure Of TolbPAL COMPLEX gi|145579536|pdb|2HQS|C Chain C, Crystal Structure Of TolbPAL COMPLEX gi|145579538|pdb|2HQS|E Chain E, Crystal Structure Of TolbPAL COMPLEX gi|145579540|pdb|2HQS|G Chain G, Crystal Structure Of TolbPAL COMPLEX gi|223673846|pdb|2W8B|C Chain C, Crystal Structure Of Processed Tolb In Complex With Pal gi|223673847|pdb|2W8B|E Chain E, Crystal Structure Of Processed Tolb In Complex With Pal gi|223673848|pdb|2W8B|G Chain G, Crystal Structure Of Processed Tolb In Complex With Pal gi|223673849|pdb|2W8B|H Chain H, Crystal Structure Of Processed Tolb In Complex With Pal Length = 118 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 7/113 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 ++ Q N FD + +L L + ++ GH D N Sbjct: 1 MLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNIS 57 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 L RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 58 LGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 109 >gi|104780481|ref|YP_606979.1| OmpA family outer membrane protein [Pseudomonas entomophila L48] gi|95109468|emb|CAK14169.1| putative outer membrane protein, OmpA family [Pseudomonas entomophila L48] Length = 322 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 81/229 (35%), Gaps = 18/229 (7%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 S + K+ ++Q K ++T + K +S+ E Sbjct: 22 SQDASKEGGLSWWPFGSDKVAEQE--VKAAVTENVAKADAKSESSSRWWWPFGSEEKKPA 79 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + KI + L K+ + G + + + T D+ N + Sbjct: 80 AAAVPKIDQKATQAWLDQYEPKVREAIKGSKLELERREDVLAVTIPVDSSYNPDRPNMLL 139 Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 P T+ + ++ +V+ + + I GH D+ N +LSL+RA S Sbjct: 140 ---------PITLGPITQVAKVIETDTKTAVLILGHADS---SGATAANQKLSLERAASV 187 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + SG+ DR+ + G + A+D NRR+++L+ + Sbjct: 188 SAIFRLSGLQRDRLM-LKGMGSVMPRAANDSAEGRALNRRVEMLLTPQN 235 >gi|163751256|ref|ZP_02158484.1| peptidoglycan-associated lipoprotein [Shewanella benthica KT99] gi|161328970|gb|EDQ00044.1| peptidoglycan-associated lipoprotein [Shewanella benthica KT99] Length = 178 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 7/164 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LS + + S +G V V +L + + + + + Sbjct: 18 ALSACSSTSESETDATSSTSGSGSELATGGVETGGVAPILTPEEQQRLKYQELRKEHIIY 77 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S+ + VLQ G L V I GH D N L RA + Sbjct: 78 FDFDRSLVSAQFAEVLQAHGNYLVEHPNVRLMIEGHADER---GTPEYNIALGERRAKAV 134 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + L GV ++S +S + + S + + NRR ++ Sbjct: 135 AKYLQGMGVLPSQMSIVS-YGEEKPLDMSRTDDSFAINRRAVLV 177 >gi|308182972|ref|YP_003927099.1| flagellar motor protein MotB [Helicobacter pylori PeCan4] gi|308065157|gb|ADO07049.1| flagellar motor protein MotB [Helicobacter pylori PeCan4] Length = 255 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLDKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|103487471|ref|YP_617032.1| OmpA/MotB [Sphingopyxis alaskensis RB2256] gi|98977548|gb|ABF53699.1| OmpA/MotB [Sphingopyxis alaskensis RB2256] Length = 373 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 38/110 (34%), Gaps = 8/110 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSL 289 FD S PE L + I + GH D AR N LS Sbjct: 261 PYIVYFDWDQSNITPEAASTLDNAISAYNRGCTGTQIMLAGHADR---SGSARYNVGLSE 317 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 R + L G+S+ IS F R +A+ N NRR++I Sbjct: 318 RRNDAVRSYLTARGISDGSISA-QAFGETRPAVATADGVRNDQNRRVEIT 366 >gi|327479764|gb|AEA83074.1| outer membrane protein [Pseudomonas stutzeri DSM 4166] Length = 297 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 8/102 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S L I + L I + GH+D N LS RA + Sbjct: 178 FPSSDVALDALGRAKLDIILQYLRADPSVNRIQLDGHSDN---SGNRLVNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 + L+ +GV E +I + +A+ + NRR+ Sbjct: 235 VQEYLIANGVPEQQI-TVRFHGERYPLVANSSEANRAKNRRV 275 >gi|261253096|ref|ZP_05945669.1| outer membrane protein [Vibrio orientalis CIP 102891] gi|260936487|gb|EEX92476.1| outer membrane protein [Vibrio orientalis CIP 102891] Length = 204 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 16/135 (11%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + V ++ + E + + I +F S P +Q + + L Sbjct: 60 IGAQVDNDGCGAAIVEEEQRQLRI---------LFANDSYEINPIFSDQIQTMAQFLEKY 110 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I I+G+ N LS RA++ L+ V R+ I G+ RL+ Sbjct: 111 QSASIQIQGYASKV---GDPEYNLELSKKRAHAVEDELLYFEVDPKRV-TIVGYGESRLE 166 Query: 322 I--ASDPMNSANRRI 334 + ++ NRR+ Sbjct: 167 AEGDDETSHALNRRV 181 >gi|242279927|ref|YP_002992056.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] gi|242122821|gb|ACS80517.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638] Length = 240 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 8/139 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 ++ + V + + I + R F +I +T L ++ EVL S Sbjct: 98 EDVLYRSDDGAVSMKEEDGELKIVM---RGNAFFAPGQNIFEDKTRQYLAEVAEVLKTSK 154 Query: 264 EVISIRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK 321 I I GHTDAS + N + LS RA + L+ + RI +SG + Sbjct: 155 HAIHIIGHTDASDAAKVGAQNSFELSARRAAKVAEFLINTKSIDPVRII-VSGRGGVAPE 213 Query: 322 IASDPM--NSANRRIDILV 338 + D NRR++I+V Sbjct: 214 LPDDMGKVEGNNRRVEIVV 232 Score = 39.9 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 21/176 (11%), Positives = 54/176 (30%), Gaps = 2/176 (1%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + D + + W + ++D M V+ F+V++I + + K I + + A Sbjct: 16 KSGDADTSGMNGWAVPWSDLMMVMFVLFVVLFIYSQ-SKENIKVIFEGNAQSEVAMNPAD 74 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 I + S + + E + S D + + + + + + + Q Sbjct: 75 GLIEMISFHRDAMSSSARVIMTPEDVLYRSDDGAVSMKEEDGELKIVMRGNAFFAPGQNI 134 Query: 141 -EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 E + + K + L+ +R ++ + Sbjct: 135 FEDKTRQYLAEVAEVLKTSKHAIHIIGHTDASDAAKVGAQNSFELSARRAAKVAEF 190 >gi|170693710|ref|ZP_02884868.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] gi|170141492|gb|EDT09662.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] Length = 215 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 18/119 (15%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD ++ P L + + + + G+TD + N RLSL Sbjct: 97 QADALFDFDKAVLKPAGKEKLDDLASKIQGLNLEVVVATGYTDRI---GSDKYNDRLSLR 153 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338 RA + L+ G+ +RI G N N RR+++ V Sbjct: 154 RAQAVKAYLVSKGIESNRIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209 >gi|258624664|ref|ZP_05719599.1| lateral flagellar MotY-like protein [Vibrio mimicus VM603] gi|258583056|gb|EEW07870.1| lateral flagellar MotY-like protein [Vibrio mimicus VM603] Length = 366 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 8/136 (5%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISI 268 V E + D+ F E + L+ + + + + Sbjct: 215 NQSTVQREQLPKMPFLDTRDREVVIYFAFGQRTLSNEQKMRLRALYRYIVEDSRVNTVLV 274 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 G+TD + N +S RA + L + G++E+++ ++ ++D Sbjct: 275 DGYTDNV---GPSVANLTISRQRAELIAKELNRLGLAEEKV-EVRAHGLRYPVASNDTAA 330 Query: 329 --SANRRIDILVEDRQ 342 + NRR+ + + Sbjct: 331 GQAKNRRVTLRLVRDN 346 >gi|121604226|ref|YP_981555.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120593195|gb|ABM36634.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2] Length = 376 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 18/119 (15%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F S+ L +I L + I G+TD ++ N +LS RA Sbjct: 261 LFAFDSTGLRMP-QPRLDEIAAALGSHGEVNEVVITGYTDRI---GSSQYNQKLSERRAL 316 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMNSA-------NRRID---ILVEDR 341 + L G+ +R+ G +A +D A NRR++ I +E R Sbjct: 317 AVKTYLTGKGIDANRLKA-QGKGEADPVVACTDKKLPALIKCLEPNRRVEVENITIERR 374 >gi|332162167|ref|YP_004298744.1| outer membrane protein A [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606220|emb|CBY27718.1| outer membrane protein A precursor [Yersinia enterocolitica subsp. palearctica Y11] gi|325666397|gb|ADZ43041.1| outer membrane protein A [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 357 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L+ + + G D N LS Sbjct: 229 KSDVLFAFNKSTLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 285 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+I+ G + P + +RR++I Sbjct: 286 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 344 Query: 338 VED 340 V+ Sbjct: 345 VKG 347 >gi|312882598|ref|ZP_07742338.1| peptidoglycan-associated lipoprotein [Vibrio caribbenthicus ATCC BAA-2122] gi|309369758|gb|EFP97270.1| peptidoglycan-associated lipoprotein [Vibrio caribbenthicus ATCC BAA-2122] Length = 176 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S E VL L+ + +++ GH D N L RA + Sbjct: 76 FAFDNSTIASEYEKVLAAHAAYLSQNPSVKVTVEGHADER---GTPEYNIALGERRAKAV 132 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + L GV D+IS +S + + + + NRR ++ Sbjct: 133 AKYLQALGVQADQISIVS-YGEEKPLLLGQTAEAYAKNRRAVLV 175 >gi|225848487|ref|YP_002728650.1| OmpA/MotB [Sulfurihydrogenibium azorense Az-Fu1] gi|225643425|gb|ACN98475.1| putative OmpA/MotB [Sulfurihydrogenibium azorense Az-Fu1] Length = 281 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S E + L + L + + I G+TD N +L+L RA + Sbjct: 176 FYLNSVSIKKEYLPYLNVVARYLKTHPDVKVKIVGYTDNI---GSKAYNDKLALKRAETV 232 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + L+K G+ +RI I G + +++ NRR + V Sbjct: 233 KKYLVKMGIDPNRIL-IEGVGKDKYIVSNKNEIDRFTNRRAEFYV 276 >gi|46015011|pdb|1OAP|A Chain A, Mad Structure Of The Periplasmique Domain Of The Escherichia Coli Pal Protein Length = 109 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 Q N FD + +L L + ++ GH D N L Sbjct: 3 QNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGE 59 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 60 RRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 108 >gi|209519335|ref|ZP_03268134.1| OmpA/MotB domain protein [Burkholderia sp. H160] gi|209500219|gb|EEA00276.1| OmpA/MotB domain protein [Burkholderia sp. H160] Length = 215 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 41/119 (34%), Gaps = 18/119 (15%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD +I P L ++ + + + GHTD N RLSL Sbjct: 97 QADALFDFDKAILKPAGKDRLSELASKIQGINLEVVVATGHTDRI---GSDAYNDRLSLR 153 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338 RA + L+ GV +RI G N N RR+++ V Sbjct: 154 RAQAVKAFLVSKGVEANRIYT-EGKGRRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209 >gi|162146629|ref|YP_001601088.1| outer membrane lipoprotein omp16 [Gluconacetobacter diazotrophicus PAl 5] gi|209543379|ref|YP_002275608.1| peptidoglycan-associated lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|161785204|emb|CAP54750.1| Outer membrane lipoprotein omp16 [Gluconacetobacter diazotrophicus PAl 5] gi|209531056|gb|ACI50993.1| peptidoglycan-associated lipoprotein [Gluconacetobacter diazotrophicus PAl 5] Length = 158 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + + + L + LA + I + G+ D N L R Sbjct: 53 DRVFFELNKNNLSSDAQATLDRQAAWLAKYPQVTIQVAGNCDDR---GTEEYNIALGERR 109 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 A +A L+ GV+ RI+ IS + R D + NR Sbjct: 110 ANAARDYLVAKGVAASRITTIS-YGKDRPTATGDDEQSWAQNR 151 >gi|157962391|ref|YP_001502425.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC 700345] gi|157847391|gb|ABV87890.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345] Length = 289 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 ++ + + ++ E LA + +++ I +TD+ N ++S RA S Sbjct: 184 YESGGTELTRYAKSQIARVQEYLAYDQNVDLVLIDAYTDSY---GGRSINQKVSEQRADS 240 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + SG+ ++RI + G R ++ S NRR+ I + Sbjct: 241 VKDFFVASGIGQNRIHTM-GHGEKRHVASNQTIDERSRNRRVVIRISKP 288 >gi|309973370|gb|ADO96571.1| Outer membrane protein P5 [Haemophilus influenzae R2846] Length = 359 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 16/118 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P+ L + ++ +++ G+TD N +LS +RA S Sbjct: 246 FAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGYTDRI---GSDAFNVKLSQERADSV 302 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILVEDRQ 342 + GV+ D IS +G+ D + +RR++I V + Sbjct: 303 ANYFVAKGVAADAISA-TGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAVNGTK 359 >gi|259090535|gb|ACV91890.1| OprL [Pseudomonas fluorescens] gi|259090539|gb|ACV91892.1| OprL [Pseudomonas fluorescens] gi|259090545|gb|ACV91895.1| OprL [Pseudomonas fluorescens] gi|259090553|gb|ACV91899.1| OprL [Pseudomonas fluorescens] gi|259090561|gb|ACV91903.1| OprL [Pseudomonas fluorescens] gi|259090573|gb|ACV91909.1| OprL [Pseudomonas fluorescens] gi|259090575|gb|ACV91910.1| OprL [Pseudomonas fluorescens] gi|259090581|gb|ACV91913.1| OprL [Pseudomonas fluorescens] Length = 157 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 4/89 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 67 FEYDSSDLKPEAMRALDVHAKDLKGNGARVVLEGNTDER---GTREYNMALGERRAKAVQ 123 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325 + L+ GVS ++ +S + R + Sbjct: 124 RYLVLQGVSPAQLELVS-YGEERPVATGN 151 >gi|323436025|ref|ZP_01049805.2| peptidoglycan-associated lipoprotein [Dokdonia donghaensis MED134] gi|321496340|gb|EAQ39777.2| peptidoglycan-associated lipoprotein [Dokdonia donghaensis MED134] Length = 306 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 78/280 (27%), Gaps = 30/280 (10%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 + + F + + F P N I + + + + T Sbjct: 53 LRGTDGNFAFTSNDNFNFNSSDFAIITPVAGDVNNGIAKLKGYFDAEGNDNKMVNITGYY 112 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + L ++ + + + + E+ + + Y P Sbjct: 113 DSDEVNNSAYANLGLARATAVKNYFVDQGISSSRINTYGELREELVPDGDIYRGPVSYNL 172 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 A + + + Q+ ++ + ++I S Sbjct: 173 YAQAAEDEAKAQEDLANMAEAIKADP----------------LVIYFDYSEA-------S 209 Query: 242 SIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + L I L I++ GHTD+ N RL L+RA Q L Sbjct: 210 VNLNAQQRKKLGNITRYLDKVEGSSITVEGHTDSQ---GSMATNDRLGLERAEFGKQYLQ 266 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +G++ +I ++ +D NRR I + Sbjct: 267 NNGIAGAKIKTVT-KGERNPIATNDTEEGRTQNRRAVITI 305 >gi|239994128|ref|ZP_04714652.1| OmpA/MotB [Alteromonas macleodii ATCC 27126] Length = 398 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 8/111 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD S++ + + E + ++ GHT A N LS RA Sbjct: 284 RVLFDNESAVVKMPKDPEISEFAEFMKQYPSTTAVIEGHTSA---PGSEAYNMDLSKRRA 340 Query: 293 YSAYQVLMK-SGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340 + +V++ G+ R+ I G+ +L + + NRRI + V+D Sbjct: 341 ANFKEVMVDMYGIEGSRLETI-GYGETQLLDNGKNAEAHRVNRRISVTVKD 390 >gi|149191044|ref|ZP_01869304.1| putative outer membrane protein [Vibrio shilonii AK1] gi|148835072|gb|EDL52049.1| putative outer membrane protein [Vibrio shilonii AK1] Length = 207 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 70/188 (37%), Gaps = 18/188 (9%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKR--LQDLAKKISSTLSGLVADNIVKGVLFE 218 N + +Y PL+ +K + + I++ + ++ + + Sbjct: 19 ASATTPENDKYDYIATPLADQKADLIDDDGDGVINARDLCIATPEGAALDNDGCEQYVDV 78 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277 + + I +FD +S+ P + ++ + L + I+G+ Sbjct: 79 SNTMALRI---------LFDNASTYIKPVFQTQISQMADFLKEYPDTTIEIQGYAS---V 126 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRID 335 N LS +RA + ++ +G++ +R+ I G+ + ++ ++ NR++ Sbjct: 127 VGNPEKNLVLSKNRAEVVREAIINNGIAPERL-TIVGYGDTQPEELGDTEFAHAMNRKVV 185 Query: 336 ILVEDRQG 343 V +G Sbjct: 186 ASVVGYKG 193 >gi|15645435|ref|NP_207609.1| flagellar motor protein MotB [Helicobacter pylori 26695] gi|3024164|sp|P56427|MOTB_HELPY RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein MotB gi|2313948|gb|AAD07865.1| flagellar motor rotation protein (motB) [Helicobacter pylori 26695] Length = 257 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDAINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|34581206|ref|ZP_00142686.1| peptidoglycan-associated lipoprotein precursor [Rickettsia sibirica 246] gi|28262591|gb|EAA26095.1| peptidoglycan-associated lipoprotein precursor [Rickettsia sibirica 246] Length = 155 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P+ L++ L+ E ++I GH D N L RA +A Sbjct: 53 FAFDSSALSPKAKEELERQACWLSKHPEVKVTIEGHCDER---GTKEYNLGLGERRAAAA 109 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337 + L G+ +R++ IS + R + + + NRR + ++ Sbjct: 110 KKFLAHKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVTVV 153 >gi|260596996|ref|YP_003209567.1| hypothetical protein CTU_12040 [Cronobacter turicensis z3032] gi|260216173|emb|CBA29013.1| hypothetical protein CTU_12040 [Cronobacter turicensis z3032] Length = 465 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 6/128 (4%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IR 269 + + R + + +F S+ P + LQ + ++ I Sbjct: 324 LQQEAQATIDRYRNVPFFSSKAPVSLFSSGSARLRPHSPTALQPLLMLVNQHPGRRFLII 383 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 GH+D + N +LS+ RA + + L+K+ ++ G ++D Sbjct: 384 GHSDNT---GSPEVNRQLSVSRAIAVREWLVKTTRRSATQFEVYGSGASDPVASNDSEMG 440 Query: 330 A--NRRID 335 NRR++ Sbjct: 441 RELNRRVE 448 >gi|198282622|ref|YP_002218943.1| OmpA/MotB domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667641|ref|YP_002424813.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247143|gb|ACH82736.1| OmpA/MotB domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519854|gb|ACK80440.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 217 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S L I VL ++ E V+ + G+ N +LS RA S Sbjct: 108 FKFDSYKLLDHDIRVLDEVASFAKKHPEAVLDVNGYCSKV---GTYAYNLKLSKLRAQSV 164 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 Q L GV+ DR+ + G ++ + N+R++I Sbjct: 165 AQYLAHHGVASDRMV-LKGHSYDNPVATNATPQGRFLNQRVEI 206 >gi|150024426|ref|YP_001295252.1| OmpA family outer membrane protein [Flavobacterium psychrophilum JIP02/86] gi|150025241|ref|YP_001296067.1| OmpA family outer membrane protein [Flavobacterium psychrophilum JIP02/86] gi|149770967|emb|CAL42434.1| Probable outer membrane protein, OmpA family [Flavobacterium psychrophilum JIP02/86] gi|149771782|emb|CAL43256.1| Probable outer membrane protein, OmpA family [Flavobacterium psychrophilum JIP02/86] Length = 644 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 FD + S+ + V L KI VL + + IR HTD+ A N LS Sbjct: 530 SIKMIYFDLNKSVIRKDASVELAKILTVLNLNPTIKIDIRSHTDSRQ---TAAYNMSLSD 586 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-----SDPMN--SANRRIDILV 338 RA S + L++ G+S DR+ G+ +L + NRR + ++ Sbjct: 587 RRAKSTIEWLVQKGISPDRL-TGRGYGESQLVNECSDGVNCTGEQHQLNRRSEFII 641 >gi|295677286|ref|YP_003605810.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] gi|295437129|gb|ADG16299.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] Length = 215 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 41/119 (34%), Gaps = 18/119 (15%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD +I P L ++ + + + GHTD N RLSL Sbjct: 97 QADALFDFDKAILKPAGKERLSELASKIQGINLEVVVATGHTDRI---GSDAYNDRLSLR 153 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338 RA + L+ GV +RI G N N RR+++ V Sbjct: 154 RAQAVKAFLVSKGVEANRIYT-EGKGRRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209 >gi|242310593|ref|ZP_04809748.1| OmpA/MotB [Helicobacter pullorum MIT 98-5489] gi|239522991|gb|EEQ62857.1| OmpA/MotB [Helicobacter pullorum MIT 98-5489] Length = 251 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 64/163 (39%), Gaps = 8/163 (4%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 ++ + + KKI S + + V G I+ +FDK+ Sbjct: 51 QQQADITTDPETTNEVKKIESEIMDFKENTRVSLGPSTIIDEGSRGFILRFNGKLLFDKN 110 Query: 241 SSIPL-PETIVVLQKIGEVLAHST--EVISIRGHTDASPF--RNIARDNWRLSLDRAYSA 295 + E + L+++ +L + + G+TD S +DN LS RA Sbjct: 111 ETTLKNAEEKLFLKRMALILQKMPANMHLDVIGYTDDSQIIPTQKYQDNLGLSAMRALGV 170 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 +VL+++GV+ +I+ + G + + + NRR++ Sbjct: 171 ARVLIENGVNPQKITSL-GNGATNFVLPNTTEENKAQNRRVEF 212 >gi|220923055|ref|YP_002498357.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219947662|gb|ACL58054.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060] Length = 192 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 8/102 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD +SS + + +G LA I I GHTD + R N RLS RA Sbjct: 81 FDFNSSRIGDAALPQVSTLGSSLARPELRDSTILIVGHTD---GKGSDRVNQRLSERRAE 137 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 + Q ++++ V + + G+ RLK++++P +ANRR+ Sbjct: 138 AVKQYIVRNYDVPGANLISV-GYGKSRLKVSNNPYAAANRRV 178 >gi|83949565|ref|ZP_00958298.1| OmpA domain protein [Roseovarius nubinhibens ISM] gi|83837464|gb|EAP76760.1| OmpA domain protein [Roseovarius nubinhibens ISM] Length = 333 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ P L + L I++ GHTDA+ N +S RA + Sbjct: 228 FATGSATLGPGPFASLTALAAYLKGDGARRIALVGHTDAT---GGRDINISISRQRARAV 284 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L++ GV ++ G + ++ NRR++ ++ Q Sbjct: 285 LDRLVEGHGVPRAQLEA-DGVGYLAPIASNLTEAGRQANRRVEAVLLTTQ 333 >gi|298370128|ref|ZP_06981444.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314] gi|298281588|gb|EFI23077.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314] Length = 298 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 60/164 (36%), Gaps = 22/164 (13%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF---DKSSSIPLPETIVVLQ 253 ++ + + G+ N + + ++ + + + +F L + + Sbjct: 139 EQAEAEMKGVKRQNHTLSRVVSKDKCAQVLKKYNLQASALFKFDRSGYQDMLEQGKREVS 198 Query: 254 KIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 I + + + +++ GHTD N LS+ RA + Q L SG+ + I Sbjct: 199 TISQDIKQNPAAVTSVNVVGHTDPE---GKPEYNDALSVKRAQTVKQALSSSGLDGN-II 254 Query: 311 KISGFAHHRLKIASD----PMNSA--------NRRIDILVEDRQ 342 G L + + P N+ NRR++I++ + Sbjct: 255 STQGKGERELVVTNCRKRFPKNAKAREKCDQPNRRVEIILHGEK 298 >gi|218675305|ref|ZP_03524974.1| hypothetical conserved membrane protein [Rhizobium etli GR56] Length = 206 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 58/190 (30%), Gaps = 11/190 (5%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 E + + + P + + + + ++T A Sbjct: 22 PAPEATPVPIATPETTPAKIGSTQASSNPDASANPAKEETVEASPTSGQGPAATSPTTAA 81 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267 I + ++ Q F SS PE +LQK+ V+ I Sbjct: 82 ATITTPQTYWKLPDDDQVNYRVQ-----FAFDSSAIAPEQKPMLQKLCSVVKEMDIKLIR 136 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP 326 I GHTDA AR N LS RA + + + +R+ + G P Sbjct: 137 IVGHTDA---SGGARYNQNLSTLRAREVARFFTEDCHIPRERLEAV-GVGEQFPLDPQTP 192 Query: 327 MNSANRRIDI 336 NRR++ Sbjct: 193 KADENRRVEF 202 >gi|86137994|ref|ZP_01056570.1| OmpA family protein [Roseobacter sp. MED193] gi|85825586|gb|EAQ45785.1| OmpA family protein [Roseobacter sp. MED193] Length = 213 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 36/98 (36%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + + E VL + + E + GHTDA N +L L RA SA Sbjct: 70 FAFNDARLDGEARAVLDRQAAWIKQFPEVRFRVYGHTDAV---GGNSYNKQLGLRRARSA 126 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L+ G+ R+ + + I + NRR Sbjct: 127 VNHLVSRGIDRRRLEAMVSKGESQPLILTQEPERRNRR 164 >gi|113968724|ref|YP_732517.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4] gi|113883408|gb|ABI37460.1| OmpA/MotB domain protein [Shewanella sp. MR-4] Length = 202 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + +F S+ PE +++I L +I GHT + N LS Sbjct: 74 KEINVLFPNDSAYIAPEYYPQIEEIAMFLRQYPTTKVTIEGHTSRT---GTDERNAVLSQ 130 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 +RA + VL + R++ I G+ R + ++ NRR+ Sbjct: 131 ERADAVTAVLADRFSIDRSRLTAI-GYGSSRPLVLEHTPDAETRNRRV 177 >gi|301026373|ref|ZP_07189819.1| OmpA family protein [Escherichia coli MS 69-1] gi|300395559|gb|EFJ79097.1| OmpA family protein [Escherichia coli MS 69-1] Length = 160 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEALSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|213961779|ref|ZP_03390045.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno] gi|213955568|gb|EEB66884.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno] Length = 330 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 62/155 (40%), Gaps = 14/155 (9%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + +++ IS T + ++ V + + FD + + V L Sbjct: 182 ELMSQPISLTTAQQKIYSLFPNVFEVNKGDNLANIF--NIDNIYFDFGHTNIRKDASVQL 239 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 KI L + I ++ HTD+ + N L+ +A S Q L+K G++ RI Sbjct: 240 AKIVAFLEDNPTLKIIVKVHTDSR---GNDKYNRELTETQAKSIEQWLIKRGIASHRIIA 296 Query: 312 ISGFAHHRLKIA-------SDPMNSANRRIDILVE 339 G+ +L ++ + AN+R++ +V+ Sbjct: 297 -KGYGATQLVNGCEKGVPCTEEEHQANKRVEFIVD 330 >gi|145633105|ref|ZP_01788837.1| Outer membrane protein P5 [Haemophilus influenzae 3655] gi|144986331|gb|EDJ92910.1| Outer membrane protein P5 [Haemophilus influenzae 3655] Length = 359 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 16/118 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P+ L + ++ +++ G+TD N +LS +RA S Sbjct: 246 FAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGYTDRI---GSDAFNVKLSQERADSV 302 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILVEDRQ 342 + GV+ D IS +G+ D + +RR++I V + Sbjct: 303 ANYFVAKGVAADAISA-TGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAVNGTK 359 >gi|167623616|ref|YP_001673910.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167353638|gb|ABZ76251.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4] Length = 289 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 ++ + + K+ E LA + +++ I +TD+ N R+S RA S Sbjct: 184 YESGGTELTRYAKSQIAKVQEYLAYDKNVDLVLIDAYTDSY---GGRSANQRVSEQRADS 240 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 ++ + SG+ ++RI + G R ++ S NRR+ I + Sbjct: 241 VKELFVASGIGQNRIHTL-GHGERRHVASNQTIDERSRNRRVVIRISKP 288 >gi|126662166|ref|ZP_01733165.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteria bacterium BAL38] gi|126625545|gb|EAZ96234.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteria bacterium BAL38] Length = 642 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 FD S + + + V+ + ++ I+ HTD+ ++ N LS Sbjct: 528 SIQNIYFDLDKSEINDKAEKQIAILLYVMQKNPDIKLEIKSHTDSRASKS---YNLELSN 584 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 RA L+K+G+ RIS G+ RL S+ + NRR + +V Sbjct: 585 KRALETSNWLVKNGIDSSRISS-KGYGESRLVNHCSDGVKCSEEEHQMNRRSEFIV 639 >gi|123441891|ref|YP_001005874.1| outer membrane protein A [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088852|emb|CAL11658.1| putative outer membrane porin A protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 357 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L+ + + G D N LS Sbjct: 229 KSDVLFAFNKSTLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 285 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+I+ G + P + +RR++I Sbjct: 286 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 344 Query: 338 VED 340 V+ Sbjct: 345 VKG 347 >gi|16272329|ref|NP_438542.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus influenzae Rd KW20] gi|68248984|ref|YP_248096.1| outer membrane protein P6 [Haemophilus influenzae 86-028NP] gi|145630448|ref|ZP_01786229.1| outer membrane protein P6 precursor [Haemophilus influenzae R3021] gi|145632628|ref|ZP_01788362.1| scaffold protein [Haemophilus influenzae 3655] gi|145634623|ref|ZP_01790332.1| outer membrane protein P6 precursor [Haemophilus influenzae PittAA] gi|145638710|ref|ZP_01794319.1| outer membrane protein P6 precursor [Haemophilus influenzae PittII] gi|148825337|ref|YP_001290090.1| outer membrane protein P6 [Haemophilus influenzae PittEE] gi|229844456|ref|ZP_04464596.1| outer membrane protein P6 precursor [Haemophilus influenzae 6P18H1] gi|229846468|ref|ZP_04466576.1| outer membrane protein P6 precursor [Haemophilus influenzae 7P49H1] gi|260580556|ref|ZP_05848384.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae RdAW] gi|260582355|ref|ZP_05850148.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae NT127] gi|319775690|ref|YP_004138178.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus influenzae F3047] gi|319898097|ref|YP_004136294.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus influenzae F3031] gi|329122256|ref|ZP_08250844.1| peptidoglycan-associated lipoprotein [Haemophilus aegyptius ATCC 11116] gi|129596|sp|P10324|PAL_HAEIN RecName: Full=Outer membrane protein P6; Short=OMP P6; AltName: Full=15 kDa peptidoglycan-associated lipoprotein; Short=PC protein; Flags: Precursor gi|148860|gb|AAA24940.1| PC protein precursor [Haemophilus influenzae] gi|148961|gb|AAA24994.1| outer membrane protein P6 precursor [Haemophilus influenzae] gi|1573351|gb|AAC22039.1| peptidoglycan-associated outer membrane lipoprotein (pal) [Haemophilus influenzae Rd KW20] gi|68057183|gb|AAX87436.1| outer membrane protein P6 precursor [Haemophilus influenzae 86-028NP] gi|144984183|gb|EDJ91620.1| outer membrane protein P6 precursor [Haemophilus influenzae R3021] gi|144986823|gb|EDJ93375.1| scaffold protein [Haemophilus influenzae 3655] gi|145268168|gb|EDK08163.1| outer membrane protein P6 precursor [Haemophilus influenzae PittAA] gi|145272305|gb|EDK12213.1| outer membrane protein P6 precursor [Haemophilus influenzae PittII] gi|148715497|gb|ABQ97707.1| outer membrane protein P6 precursor [Haemophilus influenzae PittEE] gi|229810561|gb|EEP46279.1| outer membrane protein P6 precursor [Haemophilus influenzae 7P49H1] gi|229812705|gb|EEP48394.1| outer membrane protein P6 precursor [Haemophilus influenzae 6P18H1] gi|260092898|gb|EEW76833.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae RdAW] gi|260094723|gb|EEW78618.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae NT127] gi|301169083|emb|CBW28680.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus influenzae 10810] gi|309750200|gb|ADO80184.1| Peptidoglycan-associated outer membrane lipoprotein [Haemophilus influenzae R2866] gi|309972460|gb|ADO95661.1| Peptidoglycan-associated outer membrane lipoprotein [Haemophilus influenzae R2846] gi|317433603|emb|CBY81987.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus influenzae F3031] gi|317450281|emb|CBY86497.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus influenzae F3047] gi|327473817|gb|EGF19234.1| peptidoglycan-associated lipoprotein [Haemophilus aegyptius ATCC 11116] Length = 153 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 7/135 (5%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 ++ +T + + + NT F E + +L L Sbjct: 18 AACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 77 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + + G+TD N L RA + L GV ++ +S + + Sbjct: 78 TPAAKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKP 133 Query: 321 KIASDPMNS--ANRR 333 + + NRR Sbjct: 134 AVLGHDEAAYSKNRR 148 >gi|170727075|ref|YP_001761101.1| peptidoglycan-associated lipoprotein [Shewanella woodyi ATCC 51908] gi|169812422|gb|ACA87006.1| peptidoglycan-associated lipoprotein [Shewanella woodyi ATCC 51908] Length = 178 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 7/127 (5%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHT 272 VL + + + + + FD S + VLQ GE L + I GH Sbjct: 55 PVLTPQEQQRLKYQELRKEHIIYFDFDRSSVSAQFAEVLQAHGEYLIEHPNVRVMIEGHA 114 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA 330 D N L RA + + L GV ++S +S + + +D + Sbjct: 115 DER---GTPEYNIALGERRAKAVAKYLQGMGVLPSQMSIVS-YGEEKPLDMSRTDDGFAV 170 Query: 331 NRRIDIL 337 NRR ++ Sbjct: 171 NRRAVLV 177 >gi|218709831|ref|YP_002417452.1| putative outer membrane protein [Vibrio splendidus LGP32] gi|218322850|emb|CAV19027.1| putative outer membrane protein [Vibrio splendidus LGP32] Length = 211 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 10/163 (6%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVAD--NIVKGVLFETTRTGILISIIDQRN-T 234 +E + +++ DL + + + G I + R Sbjct: 30 QQREAYIETPEAEQIADLQDDDKDGVVNARDTCPGTPETSQVDNDGCGETIRAEEVRQLK 89 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F S P + + E L + I I+G+ N LS RA Sbjct: 90 ILFAHDSFEVNPIFSSQISTMAEFLENYKSASIEIQGYASKV---GSNEYNLDLSKKRAN 146 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRI 334 + L+ +G+ +R+ +I G+ RL+ D ++ NR++ Sbjct: 147 NVQDELLSNGIEPERV-RIVGYGEERLENDGDDPTSHALNRKV 188 >gi|218887447|ref|YP_002436768.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758401|gb|ACL09300.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 170 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 FD E+ VL++ +VL + + GH D N L Sbjct: 63 DAKVYFDFDKFDLKAESKEVLKQKADVLKKFPSIRVLVEGHCDER---GTQEYNLALGER 119 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338 RA +AY+ L+ SGV+ ++ IS + R + ++ S NRR + + Sbjct: 120 RARAAYEYLVMSGVNAGQLEMIS-YGEERPAVEGHNEAAWSKNRRGEFKI 168 >gi|149191161|ref|ZP_01869419.1| hypothetical protein VSAK1_02239 [Vibrio shilonii AK1] gi|148834999|gb|EDL51978.1| hypothetical protein VSAK1_02239 [Vibrio shilonii AK1] Length = 305 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294 F + + I ++ +++ I G+TD + N ++S R Sbjct: 201 FQSGAVALTELQKRTIGDISSLVKRDPKIVKILIDGYTDN---SGDSVANLQISKQRGSD 257 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 Q +++GVS ++ +I G K + NRR++I + + Sbjct: 258 VAQWFVENGVS-KKMIEIRGHGDRYPKYDNTTEEGRDKNRRVEIRLVRK 305 >gi|114797840|ref|YP_758889.1| OmpA family protein [Hyphomonas neptunium ATCC 15444] gi|114738014|gb|ABI76139.1| ompA family protein [Hyphomonas neptunium ATCC 15444] Length = 180 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 FD + +L++ L V + G+ D N L R Sbjct: 70 ERVYFDLDQYGLDSDDQEILKRQAAWLNAYPNVRVLVAGNADER---GTREYNLALGERR 126 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332 A +A L+ GVS R+ +S + R ++D + NR Sbjct: 127 ASAAKDYLVSLGVSASRVDTVS-YGKERPVAGGSNDESWAMNR 168 >gi|87198413|ref|YP_495670.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444] gi|87134094|gb|ABD24836.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444] Length = 174 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 8/111 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD S L + LA ++I GH D N L R Sbjct: 68 DRVFFDFDSYGLDDTDRATLTRQASWLAQYPNVNVTIEGHADER---GTRDYNLALGERR 124 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRR-IDILVE 339 A +A L GV+ R+ + + R + + + NRR + +++ Sbjct: 125 ANAAKNFLASLGVATTRM-SVVSYGKERPEALGSDEQSWAQNRRAVTMVIR 174 >gi|86146494|ref|ZP_01064817.1| Peptidoglycan-associated lipoprotein [Vibrio sp. MED222] gi|218709111|ref|YP_002416732.1| peptidoglycan-associated lipoprotein [Vibrio splendidus LGP32] gi|85835757|gb|EAQ53892.1| Peptidoglycan-associated lipoprotein [Vibrio sp. MED222] gi|218322130|emb|CAV18244.1| Peptidoglycan-associated lipoprotein precursor [Vibrio splendidus LGP32] Length = 180 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + +L L + +++ GH D N L RA + Sbjct: 80 FAFDNSTIAGDYEEMLAAHAAYLVKNVDMNVTVEGHADER---GTPEYNIALGERRAQAV 136 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + L GV D+IS +S + + + + + NRR ++ Sbjct: 137 AKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 179 >gi|320327051|gb|EFW83065.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330876989|gb|EGH11138.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 381 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 A+ + + + E + + + V + Sbjct: 14 AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGAAAKAPAPSLAPAPVAKAAAAPAAPAA 73 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 ++ S+ K D K + + + + + K+ Sbjct: 74 GAENSAPWYWPFGSKDKAQAKPDAVADKTADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + L A E + I+ F+ Sbjct: 134 PKALPMPDPKVTQAWLDEYDPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190 Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 L P T+ + ++ +V+ + I GH D N ++S +RA S + Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 SG+ +R+S+ G + A+D + NRR++IL Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284 >gi|213864488|ref|ZP_03386743.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 102 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Query: 270 GHTDASPFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 GHTD P+ N NW LS DRA ++ + L+ G+ ++ ++ G A P Sbjct: 1 GHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPD 60 Query: 328 NSANRRIDILVEDRQ 342 ++ NRRI +LV ++Q Sbjct: 61 DAINRRISLLVLNKQ 75 >gi|117619103|ref|YP_858241.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560510|gb|ABK37458.1| outer membrane protein P5 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 352 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 21/208 (10%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 D++ G + E + N++ L + K +L + + Sbjct: 143 DNDNGAAFVGALGAEYAFNRDWAARLEYQYTTPLGDKALDKTGAELDNGLLAVGVVYRFG 202 Query: 210 NIVKGVLFETTRTGILISIIDQR----NTPMFDKSSSIPLPETIVVLQKIGEVLAH---S 262 + V ++D++ + +FD + + P L + + Sbjct: 203 QVAPVVAAPVPAPAPEPVVVDKQFTLSSDVLFDFNKATLKPAAGQALDNLYSQIEQARPK 262 Query: 263 TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 V ++ G+TD N +LS RA + L+ G+ +++ + G Sbjct: 263 DGVATVIGYTDRI---GSDAYNQKLSEQRARTVADYLVGKGLPAGKVN-VEGRGKGNPVT 318 Query: 323 ASD-PMNSA---------NRRIDILVED 340 S +RR+++ VE Sbjct: 319 GDSCTSKSKKELIVCLAPDRRVEVKVEG 346 >gi|257091690|ref|YP_003165331.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044214|gb|ACV33402.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 198 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + S + L I + + GHTD + DN RL+L RA S Sbjct: 97 FLEGSDELTAASKTELVAILAEIKARPVPDIVIVGHTDRV---GMVADNDRLALRRADSF 153 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339 + L++ G++++ I G + + NRR++ILV Sbjct: 154 RKKLLQQGIADEAIQTA-GRGEREPLVNTPDETPEPRNRRVEILVR 198 >gi|94311606|ref|YP_584816.1| OmpA/MotB [Cupriavidus metallidurans CH34] gi|93355458|gb|ABF09547.1| peptidoglycan-associated outer membrane lipoprotein [Cupriavidus metallidurans CH34] Length = 169 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + + FD S + +LQ + L + I+G+TD + N L Sbjct: 64 KRSVYFDFDSYSVKQDYQGMLQAHSQYLGSNKSRKILIQGNTDER---GTSEYNLALGQK 120 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 RA + + L GV + ++ +S + K D + NRR DI+ Sbjct: 121 RAEAVRRSLAAMGVPDSQMEAVS-LGKEKPKATGHDDASWAENRRADIV 168 >gi|331010144|gb|EGH90200.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 381 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 A+ + + + E + + V + Sbjct: 14 AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGAAAKAPAPSPAPAPVAKAAAAPAAPAA 73 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 ++ S+ + K D K + + + + + K+ Sbjct: 74 GAENSAPWYWPFGSKDNAQAKPDAVADKPADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + L A E + I+ F+ Sbjct: 134 PKALPMPDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190 Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 L P T+ + ++ +V+ + I GH D N ++S +RA S + Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 SG+ +R+S+ G + A+D + NRR++IL Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284 >gi|259090543|gb|ACV91894.1| OprL [Pseudomonas fluorescens] gi|259090577|gb|ACV91911.1| OprL [Pseudomonas fluorescens] gi|259090579|gb|ACV91912.1| OprL [Pseudomonas fluorescens] Length = 156 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 4/89 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 66 FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325 + L+ GVS ++ +S + R + Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGN 150 >gi|284051859|ref|ZP_06382069.1| OmpA/MotB [Arthrospira platensis str. Paraca] Length = 285 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 78/241 (32%), Gaps = 9/241 (3%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 T + + L + +YQ + + + + + Sbjct: 50 PNTSSEMPLTEQLLRRSPEYQPSFPPPETPLTPTPTPPPTGLTPEVQQTLQPQLQQLQQD 109 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + L A ++RLQ + +++ + S A+NI Sbjct: 110 LNALIGRTAALEIQIGNSRPAETLERRLQIIEQQL-TAPSSPEAENIPPPTPRTARSRSG 168 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 I+ + +F+ SS P V+L + L + V+ + GHTD + Sbjct: 169 NGLIMTLPSDILFNPGSSTLRPGANVILDNLIPDLQNYRGAVVRVAGHTDD---SGSRQQ 225 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKIS-GFAHHRLKIASDP--MNSANRRIDILVED 340 N LS +A + Q L + V ++ G+ R + + NRRI++ + Sbjct: 226 NLVLSSAQAEAIVQYL-SNAVDYQAYHWVAIGYGMTRPALENTSDINRQLNRRIEVAITP 284 Query: 341 R 341 Sbjct: 285 P 285 >gi|260869286|ref|YP_003235688.1| putative outer membrane lipoprotein [Escherichia coli O111:H- str. 11128] gi|257765642|dbj|BAI37137.1| predicted outer membrane lipoprotein [Escherichia coli O111:H- str. 11128] Length = 160 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHAHMDGHTDNY---GEDSYNEGLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|163786724|ref|ZP_02181172.1| hypothetical protein FBALC1_16102 [Flavobacteriales bacterium ALC-1] gi|159878584|gb|EDP72640.1| hypothetical protein FBALC1_16102 [Flavobacteriales bacterium ALC-1] Length = 308 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 8/106 (7%) Query: 237 FDKSSSIP--LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ + E + I + + + GHTD + A N L DRA Sbjct: 206 FNTGQAQINLTAEQRQKIADISRCVDKLGVKVQVVGHTDNT---GDADTNMTLGQDRADF 262 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 A L+++G+ D + S + + NRR I + Sbjct: 263 AKGYLVRNGILSDNVEATS-KGQTEPIADNATDEGKAKNRRTVITI 307 Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 30/91 (32%), Gaps = 10/91 (10%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-----EVISIRGHTDASPFRNI 280 I I D N F S+ L + L + I I G+ + N Sbjct: 69 IKINDNFN---FKTSNFSILEPISTGVTSEVAKLKDYLLANPLKDIDITGYYRSDETNNS 125 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 A N L L RA + L+ GV +I Sbjct: 126 AYPN--LGLARANAVKNYLISQGVPSRQIDT 154 >gi|86131343|ref|ZP_01049941.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85817788|gb|EAQ38956.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 653 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 19/135 (14%) Query: 222 TGILISIIDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + I + D + FD P+ + L+K+ V+ I +R HTD+ Sbjct: 523 PPLKIELGDDLAKTLELNPIYFDFDKHNIRPDAALELEKVIAVMREYPSLKIDVRSHTDS 582 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA-------SDP 326 N LS R S + ++ G+S R+ G+ +L A ++ Sbjct: 583 R---APDAYNMSLSQRRNVSTIRYIVDQGGISMSRL-TGRGYGETQLTNACGNGIECTEE 638 Query: 327 MNSANRRIDILVEDR 341 + NRR + ++ + Sbjct: 639 EHQLNRRSEFIIVAK 653 >gi|238795889|ref|ZP_04639402.1| Outer membrane protein A [Yersinia mollaretii ATCC 43969] gi|238720352|gb|EEQ12155.1| Outer membrane protein A [Yersinia mollaretii ATCC 43969] Length = 350 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L+ + + G D N LS Sbjct: 222 KSDVLFAFNKSTLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+I+ G + P + +RR++I Sbjct: 279 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|330465991|ref|YP_004403734.1| OmpA/MotB domain-containing protein [Verrucosispora maris AB-18-032] gi|328808962|gb|AEB43134.1| OmpA/MotB domain protein [Verrucosispora maris AB-18-032] Length = 407 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 16/122 (13%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + +F S P L +I E + + GHTD+ A N LS Sbjct: 292 PSAALFATDSDEIGPAGRNRLAEIAEENKLPKATHLEVVGHTDSRD---DADYNQDLSER 348 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---------SDPMNSANRRIDILVEDR 341 RA + ++L + GV +SK G D NRR++I++ + Sbjct: 349 RAAAVGRILRELGVP---VSKTRGRGEEVRLCLAERLPGGGWDDACLQRNRRVEIVISKQ 405 Query: 342 QG 343 G Sbjct: 406 SG 407 >gi|224826141|ref|ZP_03699244.1| peptidoglycan-associated lipoprotein [Lutiella nitroferrum 2002] gi|224601778|gb|EEG07958.1| peptidoglycan-associated lipoprotein [Lutiella nitroferrum 2002] Length = 178 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 + + FD SS + E L + +G+TDA N L Sbjct: 69 SKRSVYFDFDSSAVKQSEQQTVANHAEYLKSHPTRKVVIQGNTDAR---GSREYNLGLGQ 125 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 RA S + GV E+++ +S F + K + + NRR DI Sbjct: 126 RRAESVKNAMQVIGVKENQLEAVS-FGKEKPKATGNTEADYAQNRRADI 173 >gi|149185390|ref|ZP_01863706.1| peptidoglycan-associated protein [Erythrobacter sp. SD-21] gi|148830610|gb|EDL49045.1| peptidoglycan-associated protein [Erythrobacter sp. SD-21] Length = 359 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F+ S PE +L A+ + + GHTD A+ N L+ Sbjct: 248 PYIVFFNWDESEITPEAATILDNAVSAYANCGMASVMLAGHTDT---SGSAQYNMGLAER 304 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 R S L G+ + RIS F ++L++ + NRR+++ Sbjct: 305 RNSSVRDYLSARGIPDGRISS-EAFGENQLRVPTADGVRELQNRRVEVT 352 >gi|161520749|ref|YP_001584176.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC 17616] gi|189353068|ref|YP_001948695.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC 17616] gi|160344799|gb|ABX17884.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC 17616] gi|189337090|dbj|BAG46159.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC 17616] Length = 163 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + + FD S PE +LQ L + I+G+TD + N L Sbjct: 57 KRSVYFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDER---GTSEYNLALGQR 113 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 R+ + L GV ++ +S + + + NRR D++ Sbjct: 114 RSQAVMSALETLGVPASQLEAVS-LGKEKPVALGHDEAAWAQNRRADLV 161 >gi|294011226|ref|YP_003544686.1| OOP-family protein [Sphingobium japonicum UT26S] gi|292674556|dbj|BAI96074.1| OOP-family protein [Sphingobium japonicum UT26S] Length = 360 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 11/111 (9%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F+ S P+ +L ++ + + G+ D A N LS Sbjct: 249 PYIVFFEWDKSDITPDAATILDNAVSAYSNCGSAQVMLAGYADR---SGSASYNVGLSQR 305 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS----ANRRIDIL 337 RA + + G+ + + F ++ + + NRR++I Sbjct: 306 RADAVKAYISSKGIPDG-VITTQAFGESNPRV--ETADGVRELQNRRVEIT 353 >gi|254477082|ref|ZP_05090468.1| OmpA/MotB [Ruegeria sp. R11] gi|214031325|gb|EEB72160.1| OmpA/MotB [Ruegeria sp. R11] Length = 331 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + + L + L +TE + GHTD N +S RA + Sbjct: 227 FETGAVELGAKPYDSLVALSSFLQDNTEFDILLVGHTDTV---GSLDQNIAISERRADAV 283 Query: 296 -YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 ++L S V RI ++G + ++ NRR+++++ R Sbjct: 284 RRRLLEDSTVDRARI-AVAGAGYMAPLTSNQTPAGREANRRVEVVLIPR 331 >gi|163750646|ref|ZP_02157883.1| OmpA family protein [Shewanella benthica KT99] gi|161329641|gb|EDQ00632.1| OmpA family protein [Shewanella benthica KT99] Length = 388 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 8/147 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 ++ + V + + + F +SS+ E+ + Sbjct: 233 DSDNDGVTDDMDQCPDTAANHKVDAKGCTIYTETTEQRDLGSIQFANNSSVVKTESFAHI 292 Query: 253 QKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 +K+ + E I GH A N LS RA + ++L++ G+S+DR+ Sbjct: 293 EKLATYMNKKPESTVLISGHASDV---GKADYNMALSDKRAKAVAKILVEKYGISQDRVE 349 Query: 311 KISGFAHHRLKIASDPMNS--ANRRID 335 GF + I + + ANRRI+ Sbjct: 350 A-KGFGITQAVIQGNSAEANKANRRIE 375 >gi|109947291|ref|YP_664519.1| flagellar motor protein MotB [Helicobacter acinonychis str. Sheeba] gi|109714512|emb|CAJ99520.1| flagellar motor rotation protein MotB [Helicobacter acinonychis str. Sheeba] Length = 253 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 82/207 (39%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGQEEEQTASESSKPASQNTESK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ITITRKGEGSVLEQIDQG------------SILKLPSNLLFENAVSDAINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VLM+ GV D++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLIKTRFKSHYELAANRAYRVMKVLMQYGVDPDQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 1/106 (0%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 PP+ + + S + + KI T + + Sbjct: 62 PEAMQPVVVIPPDSGQEEEQTASESSKPASQNTESKITITRKGEGS 107 >gi|117918835|ref|YP_868027.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3] gi|117611167|gb|ABK46621.1| OmpA/MotB domain protein [Shewanella sp. ANA-3] Length = 202 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + +F S+ PE +++I L +I GHT + N LS Sbjct: 74 KEINVLFPNDSAYIAPEYYPQIEEIAMFLRQYPTTKVTIEGHTSRT---GTDERNAVLSQ 130 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 +RA + VL + R++ I G+ R + ++ NRR+ Sbjct: 131 ERADAVTAVLADRFSIDRSRLTAI-GYGSSRPLVLEHTPDAETRNRRV 177 >gi|325287615|ref|YP_004263405.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324323069|gb|ADY30534.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 366 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 13/109 (11%) Query: 239 KSSSIPLPETIVVLQKI-GEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 SS E ++ VL + V I HTD+ + N LS RA S Sbjct: 259 TGSSTLTAEAKRIIDSRLMPVLNQNPGVKLEIASHTDSR---GNSVSNQSLSERRAKSVA 315 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 L+ GV+ + +G+ ++LK ++ ++ANRR + + Sbjct: 316 DYLISKGVNSSLLVA-NGYGENKLKNRCKDGVSCTEREHAANRRTEFRL 363 >gi|309244379|gb|ADO52194.1| OprL [Pseudomonas cichorii] gi|309244381|gb|ADO52195.1| OprL [Pseudomonas cichorii] Length = 156 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 4/89 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 66 FEYDSSDLKPEALRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325 + L+ GVS ++ +S + R + Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGN 150 >gi|330860773|emb|CBX71062.1| outer membrane protein A [Yersinia enterocolitica W22703] Length = 363 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L+ + + G D N LS Sbjct: 235 KSDVLFAFNKSTLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 291 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+I+ G + P + +RR++I Sbjct: 292 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 350 Query: 338 VED 340 V+ Sbjct: 351 VKG 353 >gi|298488773|ref|ZP_07006801.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156691|gb|EFH97783.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 376 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 A+ + + + E + + V + Sbjct: 14 AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGAAAKAPAPSPAPAPVAKAAAAPAAPAA 73 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 ++ S+ + K D K + + + + + K+ Sbjct: 74 GAENSAPWYWPFGSKDNAQAKPDAVADKPADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + L A E + I+ F+ Sbjct: 134 PKALPMPDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190 Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 L P T+ + ++ +V+ + I GH D N ++S +RA S + Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 SG+ +R+S+ G + A+D + NRR++IL Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284 >gi|242238603|ref|YP_002986784.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya dadantii Ech703] gi|242130660|gb|ACS84962.1| peptidoglycan-associated lipoprotein [Dickeya dadantii Ech703] Length = 168 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 7/117 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 + + + + N FD P+ +L L + ++ GH D Sbjct: 55 LQMQELQRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTVEGHADER---GTPE 111 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 N L RA + L GVS D+I + + + + + S NRR ++ Sbjct: 112 YNIALGERRANAVQMYLQGKGVSADQI-SVVSYGKEKPAVLGHDEAAWSKNRRAVLV 167 >gi|153812960|ref|ZP_01965628.1| hypothetical protein RUMOBE_03367 [Ruminococcus obeum ATCC 29174] gi|149830907|gb|EDM85997.1| hypothetical protein RUMOBE_03367 [Ruminococcus obeum ATCC 29174] Length = 335 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 96/337 (28%), Gaps = 65/337 (19%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + N W+ Y+D M ++ F+++ + Sbjct: 2 RRKKKSENNGFNVWR-SYSDMMAGVLLLFVLIMCVTLFQAQK------------------ 42 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 + S+ E K ++ + KQ + + + Q Sbjct: 43 -----------------SYNESLQERDEKIALQEEYTQELLDKQNALDKKDETLQNQDAQ 85 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + L ++ L ++S + L ++ ++ ++ + Sbjct: 86 LKTQDEKLAEQEQQLAALAAKLKEQESTLNAQQSA---LDEKTAQLKDQQAQIDQIIGVK 142 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI---- 255 + + L + + + +++ + MFD + L++I Sbjct: 143 ADVIEALKNEFSKNNINVDIDAQTGALTL---EASVMFDYDQAELTDAGKQALEQILPIY 199 Query: 256 -----GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK--------- 301 + I I G+TD N +LS R+ + Q L+ Sbjct: 200 CKVLLQDDYMKYLAEIIIDGYTDTD---GDYSYNLQLSQQRSLAVAQYLLDIQGNFLDTT 256 Query: 302 SGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336 + ++ ++G + + A+RR+++ Sbjct: 257 QSQNLEKYLTVNGHSMANPVLDANGNVDKDASRRVEV 293 >gi|124005217|ref|ZP_01690059.1| outer membrane protein [Microscilla marina ATCC 23134] gi|123989469|gb|EAY29030.1| outer membrane protein [Microscilla marina ATCC 23134] Length = 687 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 51/114 (44%), Gaps = 7/114 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + N F + S+ LPE+ L ++ + + + + + GHT+ + LS Sbjct: 578 RLNNIFFSRGSARLLPESYPELNRLAKAMKENPTMRIRLEGHTE---IFGNKKFLMNLSK 634 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341 R S + L + G+++ R+ + GF + R + + NRR+++ + + Sbjct: 635 QRVKSVQKYLSEKGINDRRVK-LKGFGYKRPLSRKKDEKSRALNRRVEVRILSK 687 >gi|157804141|ref|YP_001492690.1| guanylate kinase [Rickettsia canadensis str. McKiel] gi|157785404|gb|ABV73905.1| guanylate kinase [Rickettsia canadensis str. McKiel] Length = 155 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 7/100 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS P+ L++ L E ++ GH D N L RA +A Sbjct: 53 FDFDSSDLSPKAKEELERQACWLLKHPEVKATVEGHCDER---GTREYNLGLGERRAAAA 109 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 + L G+ +R++ IS + R + + + NRR Sbjct: 110 KKFLAHKGIDNNRLNIIS-YGKDRPAMMGNTEEAFAYNRR 148 >gi|53725459|ref|YP_102587.1| ompA family protein [Burkholderia mallei ATCC 23344] gi|52428882|gb|AAU49475.1| ompA family protein [Burkholderia mallei ATCC 23344] Length = 223 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 16/116 (13%) Query: 234 TPMFDKSSSI---PLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289 MF + + L ++ + L + +SI G+TD N +LS Sbjct: 105 DAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRL---GSDAYNRQLSQ 161 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA-------NRRIDIL 337 RA + L+ +GV D + G + D +A NRR++++ Sbjct: 162 ARAKTVGDYLIAAGVPADSVHA-EGRGASDPLVQCDQRERAALIACLSPNRRVEVV 216 >gi|30248243|ref|NP_840313.1| outer membrane protein [Nitrosomonas europaea ATCC 19718] gi|30180128|emb|CAD84130.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718] Length = 171 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 R + FD S E ++ L +T + ++G+TD N L Sbjct: 61 SRRSVYFDFDSYTVKSEYRDLVLAHAAYLRDNTNAQVLLQGNTDER---GSREYNLALGQ 117 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA S +L+ SG + ++ +S + + + + + NRR DIL Sbjct: 118 RRANSVKDILLLSGARDQQVEAVS-LGEEKPRALGSDESSWAENRRTDIL 166 >gi|307730629|ref|YP_003907853.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003] gi|323526963|ref|YP_004229116.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001] gi|307585164|gb|ADN58562.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003] gi|323383965|gb|ADX56056.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001] Length = 215 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 18/119 (15%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD +I P L + + + + G+TD + N RLSL Sbjct: 97 QADALFDFDKAILKPAGKEKLDDLASKIQGLNLEVVVATGYTDRI---GSDKYNDRLSLR 153 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338 RA + L+ G+ +RI G N N RR+++ V Sbjct: 154 RAQAVKAYLVSKGIESNRIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209 >gi|257465020|ref|ZP_05629391.1| outer membrane protein precursor PalA [Actinobacillus minor 202] gi|257450680|gb|EEV24723.1| outer membrane protein precursor PalA [Actinobacillus minor 202] Length = 160 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 8/108 (7%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 + + NT F S E +L ++L + +++ GH D N L Sbjct: 54 LQTRYNTVYFAFDSYAVEGEYRQLLDAHAQLLNATKANVTVAGHADER---GTPEYNIAL 110 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 RA + L + G +S +S + + + + NRR Sbjct: 111 GQRRANAVQNYLAQQG--ATNVSTVS-YGEEKPAVLGHTEADYAKNRR 155 >gi|330831536|ref|YP_004394488.1| outer membrane protein A [Aeromonas veronii B565] gi|328806672|gb|AEB51871.1| Outer membrane protein A [Aeromonas veronii B565] Length = 364 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 19/122 (15%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSL 289 + +F+ + + P L + + V ++ G+TD N LS Sbjct: 242 SDVLFEFNKATLKPAANQALDALFSQIVAANPKDGVATVIGYTDRI---GSDNYNLALSE 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-----------NRRIDILV 338 RA S L+ G+ D++ ++ G S +RR++I + Sbjct: 299 KRAQSVASYLVSKGLYADKV-RVEGRGKANPV-TGSSCASRSKQELIACLAPDRRVEIHL 356 Query: 339 ED 340 E Sbjct: 357 EG 358 >gi|257126466|ref|YP_003164580.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b] gi|257050405|gb|ACV39589.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b] Length = 149 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 8/106 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294 F + I I L++I +L E ++ G+TD++ + N +LSL RA + Sbjct: 37 FKVNGRIITEYQIFDLKEIVNILNKFGESGTVDFVGYTDST---GTKKYNQKLSLIRARN 93 Query: 295 AYQVLMKSGV-SEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 ++ + G+ I KISG +D NRR++IL Sbjct: 94 VARLFREFGLKDAISIGKISGKGEEDPVDLNDTDQGKYSNRRVEIL 139 >gi|288802401|ref|ZP_06407840.1| OmpA family protein [Prevotella melaninogenica D18] gi|288334929|gb|EFC73365.1| OmpA family protein [Prevotella melaninogenica D18] Length = 672 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 34/145 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I++ + +D + PE+ L + +L + I + HTD + A N Sbjct: 497 INVPILIDNIFYDFDKATLRPESEKALDALVNLLKENPNVTIELSAHTD---YLGSADYN 553 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-------------KIASDP----- 326 RLS RA + L G+ DR++ + G+ R +D Sbjct: 554 KRLSQRRADAVVAYLTAHGIVRDRLTPV-GYGKERPKKIRKKVTEKYPWLKENDVLTEDF 612 Query: 327 -----------MNSANRRIDILVED 340 N NRR + V Sbjct: 613 IKKLDKEKQEIANQLNRRTEFTVLR 637 >gi|224371628|ref|YP_002605792.1| putative outer membrane protein [Desulfobacterium autotrophicum HRM2] gi|223694345|gb|ACN17628.1| putative outer membrane protein [Desulfobacterium autotrophicum HRM2] Length = 350 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 5/140 (3%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L+ + G+++ +FD L ++ L Sbjct: 210 KALEESLIQAGLENHFEVAVEGPGLVLE---SVFPILFDPCKFALTDAHKRFLGRLAGFL 266 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + ++ + G TD R N LS RA + + L + G+ + KI+G ++ Sbjct: 267 KPYSVLVEVTGFTDYRKIRGTKMTNIELSAKRAGAVVRELRERGMKSS-VFKITGMGEYK 325 Query: 320 L-KIASDPMNSANRRIDILV 338 S+ +RR DI + Sbjct: 326 KCLEKSERCRVLSRRADITI 345 >gi|94970145|ref|YP_592193.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter versatilis Ellin345] gi|94552195|gb|ABF42119.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter versatilis Ellin345] Length = 242 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 65/210 (30%), Gaps = 8/210 (3%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 ++ + K +L T K+ + + + A Sbjct: 22 ATKKYTREQAAPIINKTNELDDLTAKNSRDIKDTDRRAQSGIADAQAKATTADQHAVQAG 81 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + + + T + ++ F + + L ++G Sbjct: 82 QQADAANKNATQVNGQVASLAGTVENLDNYKPVAESSVHFGFDKADLTKKAKDALDQLGG 141 Query: 258 VLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGF 315 + + I + G TD++ A N++LS RA + Q L K + +I I G Sbjct: 142 QFSSTKHFIIEVEGSTDST---GDADYNYQLSKRRADAVIQYLADKYQIPAHKIYLI-GL 197 Query: 316 AHHRLKIASDP--MNSANRRIDILVEDRQG 343 + + + NRR+D+ + G Sbjct: 198 GKDKPVEKNATSEGRAKNRRVDVRLMTNTG 227 >gi|240948556|ref|ZP_04752929.1| outer membrane protein precursor PalA [Actinobacillus minor NM305] gi|240297064|gb|EER47635.1| outer membrane protein precursor PalA [Actinobacillus minor NM305] Length = 156 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 8/108 (7%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 + + NT F S E +L ++L + +++ GH D N L Sbjct: 50 LQTRYNTVYFAFDSYAIEGEYRQLLDAHAQLLNATKANVTVAGHADER---GTPEYNIAL 106 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 RA + L + G +S +S + + + + NRR Sbjct: 107 GQRRANAVQNYLAQQG--ATNVSTVS-YGEEKPAVLGHTEADYAKNRR 151 >gi|15602831|ref|NP_245903.1| hypothetical protein PM0966 [Pasteurella multocida subsp. multocida str. Pm70] gi|18202558|sp|Q51886|PAL_PASMU RecName: Full=Outer membrane protein P6; Short=OMP P6; AltName: Full=P6-like; AltName: Full=Peptidoglycan-associated lipoprotein; Flags: Precursor gi|841126|gb|AAA79373.1| outer membrane protein, similar to Haemophilus influenzae outer membrane protein P6, Swiss-Prot Accession Number P10324 [Pasteurella multocida] gi|12721291|gb|AAK03050.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 150 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 + + NT F E + +L L + + + G+TD N Sbjct: 41 LQQRYNTVYFGFDKYNIEGEYVQILDAHAAFLNATPATKVVVEGNTDER---GTPEYNIA 97 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333 L RA + L GV ++S +S + + + + NRR Sbjct: 98 LGQRRADAVKHYLSAKGVQAGQVSTVS-YGEEKPAVLGHDEAAYSKNRR 145 >gi|320326605|gb|EFW82655.1| OmpA domain-containing protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331074|gb|EFW87046.1| OmpA domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 830 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 33/254 (12%), Positives = 72/254 (28%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEV--ISIRGHTDAS 275 ++ I I + +F + E L I L + + I I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIMIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + + G + + D Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|254706491|ref|ZP_05168319.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10] Length = 47 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 28/44 (63%) Query: 7 KNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLV 50 + + + II+++ D ++ G WKI YADFMT +MAFFLV Sbjct: 4 EPETKREIIIVRRGGHDDHEAHHGGVWKIAYADFMTAMMAFFLV 47 >gi|238757655|ref|ZP_04618839.1| Outer membrane protein A [Yersinia aldovae ATCC 35236] gi|238704160|gb|EEP96693.1| Outer membrane protein A [Yersinia aldovae ATCC 35236] Length = 350 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L+ + + G D N LS Sbjct: 222 KSDVLFAFNKSNLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+I+ G + P + +RR++I Sbjct: 279 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIDCLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|51246716|ref|YP_066600.1| peptidoglycan-associated lipoprotein [precursor] [Desulfotalea psychrophila LSv54] gi|50877753|emb|CAG37593.1| related to peptidoglycan-associated lipoprotein [Precursor] [Desulfotalea psychrophila LSv54] Length = 177 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 7/108 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 F+ SS + +Q + + A+ ++ I G+TD+ N L RA Sbjct: 72 PVYFNFDSSAVGEDQKPRVQVNADFMDANVDYMVRIEGNTDSR---GTDEYNMALGERRA 128 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 SA Q LM GV E R++ +S + RL + ++ NRR D +V Sbjct: 129 LSAQQYLMDLGVEEARLTTVS-YGKERLLLNGQSEDAWSQNRRCDFVV 175 >gi|315608144|ref|ZP_07883136.1| lipoprotein PG3 [Prevotella buccae ATCC 33574] gi|315250113|gb|EFU30110.1| lipoprotein PG3 [Prevotella buccae ATCC 33574] Length = 238 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 58/148 (39%), Gaps = 8/148 (5%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K+ + V++ V+ V + ++ + +F + S + L K Sbjct: 86 MDKVKKEVEQQVSNAKVEEVTDANGLKAVKVTF---DSGLLFPLNKSTLSASSKTELAKF 142 Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 VL + + + I+G+TD + + N LS RA S L K GV ++G Sbjct: 143 ATVLKNDPQLAVDIQGYTDRT---GGDKINIPLSQSRAESVASYLRKQGVGSSSFKNVTG 199 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 F + ++ NRR+++ + Q Sbjct: 200 FGSANEI-ENAAVSQVNRRVEVYLYASQ 226 >gi|255067169|ref|ZP_05319024.1| OmpA family protein [Neisseria sicca ATCC 29256] gi|255048537|gb|EET44001.1| OmpA family protein [Neisseria sicca ATCC 29256] Length = 253 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 39/121 (32%), Gaps = 5/121 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 G V + V + + +F I PE L + + L Sbjct: 55 DKETQGRVECGDREAVAAVQQAPEYVDETVSLSAKTLFGFDKDILRPEAQENLNSLAQRL 114 Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + + I GHTD F N LS RA L+ GV ++S +G Sbjct: 115 SNENVQTVRIEGHTD---FMGSEEYNQNLSERRANVVANYLVGRGVPSSKVSA-TGLGES 170 Query: 319 R 319 + Sbjct: 171 Q 171 >gi|325275254|ref|ZP_08141211.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] gi|324099595|gb|EGB97484.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] Length = 323 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 77/215 (35%), Gaps = 16/215 (7%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + S+ + K ++T + K +ST ++ KI + Sbjct: 35 WPFGSDKVAEQEVKAAVTDNVAKADAKSESTSRWWWPFGGDDQQAKGPVVPKIDQQATQA 94 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 L + K+ + + + + T D+ N + P ++ Sbjct: 95 WLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL---------PMSLG 145 Query: 251 VLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 + ++ + + + + GH D A N +LSL+RA S + SG+ DR+ Sbjct: 146 PITRVAKTVEGDPKTAVLVLGHADT---SGAAAANQKLSLERAASVSAIFRLSGLQRDRL 202 Query: 310 SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + G + A+D + NRR+++L+ + Sbjct: 203 -TLKGMGSVMPRAANDSPEGRALNRRVEMLLTPQN 236 >gi|319795926|ref|YP_004157566.1| ompa/motb domain protein [Variovorax paradoxus EPS] gi|315598389|gb|ADU39455.1| OmpA/MotB domain protein [Variovorax paradoxus EPS] Length = 207 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 7/176 (3%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + + + + + K K Q + ++ + +V V E + Sbjct: 36 LPQADGKPSAVVVRAKDGEEVLSKPYQRATAAVGASGAPVVDQADAAKVQAENKPLFDMR 95 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNW 285 QR T F+ + P + ++ + LA S I + GHTD + N Sbjct: 96 PPPPQRYTVFFEVGGTTLTPASQQIMTEALAAALARSGGDIVVTGHTDT---KGNGESND 152 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 +LS RA Q+ ++ +R+ + G L + + NRR+ I V Sbjct: 153 QLSRRRAQEVVQLFVEQRFPANRVEAV-GRGERDLAVPTADEVDEPRNRRVTIEVR 207 >gi|289627038|ref|ZP_06459992.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647994|ref|ZP_06479337.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330867282|gb|EGH01991.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 381 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 11/278 (3%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 A+ + + + E + + V + Sbjct: 14 AVTGCAQTPQSDSAATGGHWWQFGSGSESADAGTAAKAPAPSTAPAPVAKAAAAPAAPAA 73 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 ++ S+ + K D K + + + + + K+ Sbjct: 74 GAENSAPWYWPFGSKDNAQVKPDAVADKPADKPAAPALVAKSETDSKWWWPFGSEGKKDE 133 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + L A E + I+ F+ Sbjct: 134 PKALPMPDPKVTQAWLDGYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPA 190 Query: 244 PL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 L P T+ + ++ +V+ + I GH D N ++S +RA S + Sbjct: 191 MLLPNTLGPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRL 247 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 SG+ +R+S+ G + A+D + NRR++IL Sbjct: 248 SGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 284 >gi|259415649|ref|ZP_05739570.1| OmpA/MotB [Silicibacter sp. TrichCH4B] gi|259348879|gb|EEW60641.1| OmpA/MotB [Silicibacter sp. TrichCH4B] Length = 136 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 36/108 (33%), Gaps = 8/108 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S LQ+ T + GHTD+ N LS RA + Sbjct: 35 FFATDGSTVNAAGRKRLQEWFRNAMPGTRSFVVAGHTDSR---ASDEYNMALSQRRADAV 91 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 Q+ G RI + + ++ + + NRR++I R Sbjct: 92 AQIGRSVG---ARIKDVRAYGERSPRVPNRGAANLAQNRRVEIYCIRR 136 >gi|67459626|ref|YP_247250.1| peptidoglycan-associated lipoprotein precursor [Rickettsia felis URRWXCal2] gi|67005159|gb|AAY62085.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia felis URRWXCal2] Length = 156 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P+ L++ L+ E ++ GH D N L RA +A Sbjct: 54 FAFDSSALSPKAKEELERQACWLSKHPEVKATVEGHCDER---GTREYNLGLGERRAAAA 110 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337 + L G+ R++ IS + R + + + NRR + ++ Sbjct: 111 KKFLAHKGIDHSRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVTVV 154 >gi|183221257|ref|YP_001839253.1| OmpA domain-containing protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911348|ref|YP_001962903.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776024|gb|ABZ94325.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779679|gb|ABZ97977.1| Putative outer membrane protein, OmpA domain; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 271 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 4/108 (3%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F+ + + + K+ E LA E I+I GH + + N RLS D Sbjct: 163 DGGIAFEDGKADLKGKGKENVDKLAEALAAYPETKINITGHANRT---GAEDLNLRLSQD 219 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 RA +A ++++GV RI + G DP + +NRR+++ + Sbjct: 220 RAVTAKDAIIENGVEGKRIGTVQGLGSSTPMKNVDPKDGSNRRVEVEI 267 >gi|94968752|ref|YP_590800.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter versatilis Ellin345] gi|94550802|gb|ABF40726.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter versatilis Ellin345] Length = 286 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 22/261 (8%) Query: 87 QNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146 + + + TK +G Q+ + L + K Sbjct: 38 SDVLSLKTADGNQDVTLTDSTKVQSPKGLGLRKQQMSWASLIPGLKVSVKGALDAGGKFI 97 Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 + DL ++ ++ + E + K + K+ + ++I Sbjct: 98 AEEITFSKDDLQTASMIQAGLTPTEQ----KVDANKQSIGENKENIDTNKQQIDENQQA- 152 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 + + + F S L + T I Sbjct: 153 ----------VNKRFDDLTDFDVKKEAVVYFVSGKSSLAAADKKALTDLAAEATKLTGYI 202 Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324 ++G D++ A N LS DRA++ LM+ V I ++ Sbjct: 203 IEVKGFADST---GNAAMNQTLSKDRAFAVVNFLMQDCSVPPRHIVSPGAMGISNPVASN 259 Query: 325 DPMNSA--NRRIDILVEDRQG 343 + NRR+++ V +G Sbjct: 260 ETATGRKENRRVEVKVMVNKG 280 >gi|29467513|dbj|BAC66780.1| OmpA-like outer membrane protein [Acidithiobacillus ferrooxidans] Length = 217 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S L I VL ++ + E V+ + G+ N +LS RA S Sbjct: 108 FKFDSYKLLDHDIRVLDEVASFAKNHPEAVLDVNGYCSKV---GTYAYNLKLSKLRAQSV 164 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 Q L GV+ DR+ + G ++ + N+R++I Sbjct: 165 AQYLAHHGVASDRMV-LKGHSYDNPVATNATPQGRFLNQRVEI 206 >gi|332999380|gb|EGK18965.1| ompA family protein [Shigella flexneri VA-6] Length = 160 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ LQ + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQLQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|331674046|ref|ZP_08374808.1| YfiB [Escherichia coli TA280] gi|331068785|gb|EGI40178.1| YfiB [Escherichia coli TA280] Length = 160 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEALSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|284922551|emb|CBG35638.1| outer membrane lipoprotein [Escherichia coli 042] Length = 160 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEALSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|238754341|ref|ZP_04615697.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473] gi|238707374|gb|EEP99735.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473] Length = 355 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L+ + + G D A N +LS Sbjct: 227 KSDVLFAFNKATLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQAAPNLKLS 283 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 +RA S + L+ G+ D+IS G + P + +RR++I Sbjct: 284 ENRARSVVEYLVAKGIPADKISA-RGMGQADPVTGNTCDNVKPRAALIECLAPDRRVEIE 342 Query: 338 VED 340 V+ Sbjct: 343 VKG 345 >gi|317178824|dbj|BAJ56612.1| flagellar motor protein MotB [Helicobacter pylori F30] Length = 255 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 82/207 (39%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD P + + ++ L+ +RAY +VL++ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDMPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|148977417|ref|ZP_01814017.1| peptidoglycan-associated lipoprotein [Vibrionales bacterium SWAT-3] gi|145963369|gb|EDK28634.1| peptidoglycan-associated lipoprotein [Vibrionales bacterium SWAT-3] Length = 180 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + +L L + ++I GH D N L RA + Sbjct: 80 FAFDNSTIAGDYEEMLAAHAAYLVKNVDMKVTIEGHADER---GTPEYNIALGERRAQAV 136 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + L GV D+IS +S + + + + + NRR ++ Sbjct: 137 AKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 179 >gi|83648072|ref|YP_436507.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Hahella chejuensis KCTC 2396] gi|83636115|gb|ABC32082.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components [Hahella chejuensis KCTC 2396] Length = 513 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 11/119 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + +F +S E + + E L H IRGHT R A N +LSL Sbjct: 398 KVRPIIFASGTSELTLEGKREVDLLMENLQHYPNFRVEIRGHT---GVRGDAEANKQLSL 454 Query: 290 DRAYSAYQVL-MKSGVSEDRISKISGFAHHRLK--IASDPMNSAN-R--RIDILVEDRQ 342 DRA + Y+ + + V +R + GF + + ++ + + N R R++I++ + Sbjct: 455 DRAEAVYRYIEVTYEVDPNRF-RFVGFGGEKPLPQLPNESLRAYNYRLPRVEIVLVSGE 512 >gi|71906104|ref|YP_283691.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71845725|gb|AAZ45221.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 217 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 16/121 (13%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD + ++ P L ++ + + GHTD N +LS RA Sbjct: 101 DALFDFNKAVLRPAGKAKLDELVSKAKAIKLEVILAVGHTDRI---GSDSYNQKLSEKRA 157 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSA----------NRRIDILVEDR 341 + + L+ G+ +R+ G + N+ +RR+DI V Sbjct: 158 AAVKEYLVAKGIEANRVYT-EGKGEKQPVTGDKCKGNAKTKALIDCLQPDRRVDIEVIGT 216 Query: 342 Q 342 + Sbjct: 217 K 217 >gi|71906867|ref|YP_284454.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71846488|gb|AAZ45984.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 219 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 16/121 (13%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD + ++ P L ++ + + GHTD N +LS RA Sbjct: 103 DALFDFNKAVLRPAGKAKLDELVSKAKAIKLEVILAVGHTDRI---GSDSYNQKLSEKRA 159 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSA----------NRRIDILVEDR 341 + + L+ G+ +R+ G + N+ +RR+DI V Sbjct: 160 AAVKEYLVAKGIEANRVYT-EGKGEKQPVTGDKCKGNAKTKALIDCLQPDRRVDIEVIGT 218 Query: 342 Q 342 + Sbjct: 219 K 219 >gi|298208185|ref|YP_003716364.1| hypothetical protein CA2559_08086 [Croceibacter atlanticus HTCC2559] gi|83848106|gb|EAP85976.1| hypothetical protein CA2559_08086 [Croceibacter atlanticus HTCC2559] Length = 366 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 31/290 (10%), Positives = 74/290 (25%), Gaps = 15/290 (5%) Query: 60 DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119 + I + + NP + + + D+ Sbjct: 78 KKLRIIPTVYGTETVTYVKKQSSSVLSINPATFGNSAETIEIKPAYAQWEMSDVPPAECQ 137 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 Q+ + S + + E + Sbjct: 138 SNNPEDCRYWCYKGYPAEYQTVAVRTLANDASTSSSPVAEQAGSYTKRVVTEPARVVEEE 197 Query: 180 KEKILAMKRK----KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 A K K + +++ + + + + T + Sbjct: 198 VPAEYATITKTVLVKDAGTTEETVAAKYKTVTKEVLKQKGGLTTWAEVDCKLLEYTDLNI 257 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +++ S+ + + + I HTD+ A N LS RA + Sbjct: 258 VWNLGSASLTNAAKAEIDAKLLPVMQQGVSVEIASHTDSR---GTASSNQALSERRAQAV 314 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 L+ G++ +I+ +G+ +L+ ++ ++ NRR V Sbjct: 315 TNYLISKGINSSKITS-NGYGESKLRNRCADGVSCTEREHTLNRRTQFRV 363 >gi|312796781|ref|YP_004029703.1| peptidoglycan-associated lipoprotein [Burkholderia rhizoxinica HKI 454] gi|312168556|emb|CBW75559.1| Peptidoglycan-associated lipoprotein [Burkholderia rhizoxinica HKI 454] Length = 169 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E +LQ + L + + I+G+TD + N L RA S Sbjct: 68 FDFDSYTVSNEYQPLLQAHAQYLKGHPQRHVLIQGNTDER---GTSEYNLALGQKRAESV 124 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV++ ++ +S + + + NRR D++ Sbjct: 125 RRTLALLGVNDSQMEAVS-LGKEKPAATGHDEASWAQNRRADLV 167 >gi|296410004|gb|ADH15778.1| OmpP6 [Haemophilus influenzae] Length = 141 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 + + NT F E + +L L + + + G+TD N Sbjct: 37 LQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDER---GTPEYNIA 93 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333 L RA + L GV ++ +S + + + + NRR Sbjct: 94 LGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 141 >gi|290474098|ref|YP_003466974.1| outer membrane integrity protein [Xenorhabdus bovienii SS-2004] gi|289173407|emb|CBJ80184.1| required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA [Xenorhabdus bovienii SS-2004] Length = 167 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 35/110 (31%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 N F + +L L + + +I GH D N L Sbjct: 61 NNNIVYFGFDKYDINSDFAQMLDAHAVFLRSNPSIKVTIEGHADER---GTPEYNIALGE 117 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + L GVS D++ I + + + + NRR I+ Sbjct: 118 RRANAVKMYLQGKGVSADQL-AIVSYGKEKPAVLGHDEAAYSKNRRAVIV 166 >gi|30250467|ref|NP_842537.1| outer membrane protein [Nitrosomonas europaea ATCC 19718] gi|30139308|emb|CAD86460.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718] Length = 231 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 38/121 (31%), Gaps = 16/121 (13%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD ++ P L L + I G+TD N LS+ RA Sbjct: 111 DALFDFDKAVLKPAGKQALDDFAANLEGVNYDLIIAVGYTDRI---GSEAYNKNLSIKRA 167 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASD---PMN--------SANRRIDILVEDR 341 + L+ G+ DRI G + +RR++I V Sbjct: 168 EAVKSYLVSKGIGSDRIFT-DGKGEANPVTGDSCHGTKATRALIDCLAPDRRVEIEVAGT 226 Query: 342 Q 342 + Sbjct: 227 R 227 >gi|238026336|ref|YP_002910567.1| OmpA domain-containing protein [Burkholderia glumae BGR1] gi|237875530|gb|ACR27863.1| OmpA domain protein [Burkholderia glumae BGR1] Length = 170 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + + FD S + +LQ + L I I+G+TD + N L Sbjct: 63 KRSVYFDFDSYSVSDQYQPLLQAHAQYLKSHPARHILIQGNTDER---GTSEYNLALGQK 119 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 RA + + L GV + ++ +S + + + + NRR DI+ Sbjct: 120 RAEAVRRGLSLLGVPDSQMEAVS-LGKEKPQATGHDEAAWAQNRRADIV 167 >gi|329848731|ref|ZP_08263759.1| peptidoglycan-associated lipoprotein [Asticcacaulis biprosthecum C19] gi|328843794|gb|EGF93363.1| peptidoglycan-associated lipoprotein [Asticcacaulis biprosthecum C19] Length = 177 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 32/103 (31%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + FD S + VL L I I G+ D N+ L R Sbjct: 68 DRVYFDTDQSSIRADAQAVLSAQAAWLVRYPAVKIRIEGNADER---GTREYNFALGARR 124 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANR 332 A + L GV RIS IS + + + NR Sbjct: 125 AQAVADFLTSKGVVPSRISTIS-YGKEQPIATGADEDAWQQNR 166 >gi|119896920|ref|YP_932133.1| hypothetical protein azo0629 [Azoarcus sp. BH72] gi|119669333|emb|CAL93246.1| conserved hypothetical secreted protein [Azoarcus sp. BH72] Length = 198 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ +++ PE+ L ++ + I GHTD DN L L RA + Sbjct: 97 FETAAARLTPESRNQLPRVLAQVRSRPAPDISIIGHTDTV---GSNADNEALGLVRARTV 153 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 ++L +GV+ R ++ L + + + + NRR+++ V Sbjct: 154 LKLLEAAGVTA-REITVTSHGERNLLVPTADNTDEARNRRVEVTVR 198 >gi|85704497|ref|ZP_01035599.1| OmpA/MotB domain protein [Roseovarius sp. 217] gi|85670905|gb|EAQ25764.1| OmpA/MotB domain protein [Roseovarius sp. 217] Length = 192 Score = 75.8 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 6/105 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 FD SS + L + +V+ I GHTD+ A N RLSL RA Sbjct: 88 QISFDFDSSALRADQKPKLVTLCKVMQTADIGSFRIVGHTDS---SGSASYNERLSLLRA 144 Query: 293 YSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + L G+ +R+ + G L +DP + ANRR++ Sbjct: 145 QEVKRHLETDCGIEPERLEAV-GVGEAFLLDKADPDSDANRRVEF 188 >gi|209526860|ref|ZP_03275380.1| OmpA/MotB domain protein [Arthrospira maxima CS-328] gi|209492731|gb|EDZ93066.1| OmpA/MotB domain protein [Arthrospira maxima CS-328] Length = 285 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 83/241 (34%), Gaps = 9/241 (3%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 T + + L ++ YQ + + + + + + + Sbjct: 50 PNTSSEMPLTEQLLRREPAYQPSFPDRETPRLTPPKASPTSLTPEVQQTLQPQLQQLQQD 109 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + L A ++RLQ + +++++ S + +R+G Sbjct: 110 LNALIGRTAALEIQIGNSRPAETLERRLQIIEQQLTAPSSPEAENIPPPTPRTARSRSGS 169 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 + I+ + +F+ SS P V+L + L + V+ + GHTD + Sbjct: 170 GL-IMTLPSDILFNPGSSTLRPGANVILDNLIPDLQNYRGAVVRVAGHTDD---SARRQQ 225 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKIS-GFAHHRLKIASDP--MNSANRRIDILVED 340 N LS +A + Q L + V ++ G+ R + + NRRI++ + Sbjct: 226 NLVLSSAQAEAVVQYL-SNAVDYQAYHWVAIGYGMTRPALENTSDINRQLNRRIEVAITP 284 Query: 341 R 341 Sbjct: 285 P 285 >gi|89052772|ref|YP_508223.1| OmpA/MotB [Jannaschia sp. CCS1] gi|88862321|gb|ABD53198.1| OmpA/MotB [Jannaschia sp. CCS1] Length = 315 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 89/313 (28%), Gaps = 16/313 (5%) Query: 42 TVLM-AFFLVMWIINATDDDTKKAIEQYFN---PFGKNLMTASKGIFDEQNPPERSSQNK 97 T ++ A F+ + T D T A + + P G A+ P + + Sbjct: 7 TAMVCAAFICLPSAGQTFDLTFPAAAELVHISDPEGGQHPIATGPWSATSGVPTQIASGD 66 Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 + + + + T +++ + F S + Sbjct: 67 VQQFTWQVTGVDVTTAGLLMTLREQIEAQGYTVPFTCFASACGGFDFRHALPVGAAPEMH 126 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 D E+ L + GV Sbjct: 127 VDLGDFHYLTALSEDGDTRAALMISRGGAIGFVHLALIQPPSDPAPVIQSTRAPEPGVDD 186 Query: 218 ETTRTGILISIIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHT 272 + T ++ + + P+ F+ +S E L + LA + GHT Sbjct: 187 SPSPTDLIERLRTTGSAPLDDLQFETGASQLSGERYGSLTALAAFLAEDPARSIVLVGHT 246 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 DA N LS RA + Q L + GV ++ + G + ++ Sbjct: 247 DAL---GSLSGNIALSRSRALAVLQFLTGELGVDPAQV-EFQGIGFLSPRASNTTPEGRE 302 Query: 331 -NRRIDILVEDRQ 342 NRR+++++ + Sbjct: 303 ANRRVEVVLTTAE 315 >gi|163754882|ref|ZP_02162003.1| hypothetical protein KAOT1_02672 [Kordia algicida OT-1] gi|161324949|gb|EDP96277.1| hypothetical protein KAOT1_02672 [Kordia algicida OT-1] Length = 560 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 11/110 (10%) Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ + + + + I HTD+ A N LS RA + L Sbjct: 454 GSATLTAAAKREIDTKLLPVLQTGVSVEIASHTDSR---GSAASNEALSQRRAQAVTNYL 510 Query: 300 MKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDRQ 342 + G++ +I +G+ RL ++ + ANRR V D++ Sbjct: 511 ISKGINSSKIVS-NGYGERRLLNRCKDGVSCTEREHLANRRTQFRVLDQK 559 >gi|109897724|ref|YP_660979.1| OmpA/MotB [Pseudoalteromonas atlantica T6c] gi|109700005|gb|ABG39925.1| OmpA/MotB [Pseudoalteromonas atlantica T6c] Length = 287 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 10/134 (7%) Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPM--FDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 + F + +L D + + K+S+ + L IG+ L +++ Sbjct: 153 NFAAPYENFAQCVSNLLPYSFDDIAYTILAYQKNSTELTKYSQRRLNMIGQYLKEDSDME 212 Query: 267 SI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + G++D+ N LS+ RA GV+ RI +++G R + Sbjct: 213 LVLLDGYSDSY---GGRDMNKTLSVSRAVEIKNYFSDMGVAPQRI-EVTGHGERRHIAPN 268 Query: 325 DPM--NSANRRIDI 336 + NRR+ I Sbjct: 269 TNEMSRAKNRRVVI 282 >gi|32034275|ref|ZP_00134486.1| COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209314|ref|YP_001054539.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus pleuropneumoniae L20] gi|126098106|gb|ABN74934.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 364 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 + +F S P L + + + S I + G+TD N +LS Sbjct: 241 SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRI---GKEASNLKLSQ 297 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILV 338 RA + ++ G ++ + G+ D + +RR+++ V Sbjct: 298 RRAETVANYIVSKGALAANVTAV-GYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQV 356 Query: 339 EDRQ 342 + + Sbjct: 357 QGTK 360 >gi|229515215|ref|ZP_04404675.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae TMA 21] gi|229347920|gb|EEO12879.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae TMA 21] Length = 172 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + T F ++ + +L L + ++I GH D N L Sbjct: 66 ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADER---GTPEYNIALGE 122 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV ++S +S + + + + NRR ++ Sbjct: 123 RRAQAVAKYLEALGVQAGQLSIVS-YGEEKPLVLGQSEEAYAKNRRAVLV 171 >gi|238785957|ref|ZP_04629921.1| Outer membrane protein A [Yersinia bercovieri ATCC 43970] gi|238713147|gb|EEQ05195.1| Outer membrane protein A [Yersinia bercovieri ATCC 43970] Length = 350 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S PE L ++ L+ + + G D N LS Sbjct: 222 KSDVLFAFNKSTLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 278 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ ++I+ G + P + +RR++I Sbjct: 279 QRRADSVRDYLVSKGIPAEKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 337 Query: 338 VED 340 V+ Sbjct: 338 VKG 340 >gi|332520508|ref|ZP_08396970.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332043861|gb|EGI80056.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 743 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 11/112 (9%) Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 D S+ P + +I + + I HTD+ N LS RA + Sbjct: 636 DLGSATLTPAARAEIDRILLPVLADGVSVEIASHTDSR---GSKASNRSLSERRAQAVTN 692 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDRQ 342 L+ G++ RI +GF RL ++ + NRR V D Sbjct: 693 YLISKGINSSRIVS-NGFGESRLLNNCSDGVSCTERDHRINRRTQFRVIDAN 743 >gi|325982085|ref|YP_004294487.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212] gi|325531604|gb|ADZ26325.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212] Length = 225 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 38/121 (31%), Gaps = 16/121 (13%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD SS P I L + + + I G+ D N LSL RA Sbjct: 109 DALFDFDSSKLKPNGIQSLNEFVTGIEGVKYDLIIAVGYADRI---GSDEYNKALSLRRA 165 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-----------NRRIDILVEDR 341 S L+ G+ I + G + +RR++I V Sbjct: 166 ESVKSHLVSRGIDPSLIF-VDGKGEANPVTGNSCAGERKSKALIECLAPDRRVEIEVAGT 224 Query: 342 Q 342 + Sbjct: 225 R 225 >gi|85710327|ref|ZP_01041392.1| ompA family protein [Erythrobacter sp. NAP1] gi|85689037|gb|EAQ29041.1| ompA family protein [Erythrobacter sp. NAP1] Length = 320 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 65/229 (28%), Gaps = 11/229 (4%) Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 +++ S + + + + +L D+ K + + Sbjct: 75 VQVTSADGTSTVVTVTEETTIKARGGFLGLGRETLGADALLNGLPVKVATRQWDGGLVAS 134 Query: 173 Y---FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 L +++ +R D I +G+ + L +I Sbjct: 135 DVRFSDGDLETAEMIRSGTNQRFADNEMAIGENTAGIEKNAAATEALRGRFGDIDQYNIK 194 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLS 288 N FD + L + + + G+TD++ N RLS Sbjct: 195 STTN-VYFDTGRHNLSQQARAELCNAAAQAEATDNALLLVVGYTDST---GSQEVNQRLS 250 Query: 289 LDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 RA S L + G R+ +G A + + NRR+ Sbjct: 251 ERRAGSVVNFLQQQCGWKPWRMLSPTGMAEADPAADNTTAYGKAQNRRV 299 >gi|221200311|ref|ZP_03573353.1| OmpA family protein [Burkholderia multivorans CGD2M] gi|221205990|ref|ZP_03579004.1| OmpA family protein [Burkholderia multivorans CGD2] gi|221174002|gb|EEE06435.1| OmpA family protein [Burkholderia multivorans CGD2] gi|221179652|gb|EEE12057.1| OmpA family protein [Burkholderia multivorans CGD2M] Length = 277 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 17/119 (14%) Query: 233 NTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRL 287 +F + S P L + I + GHTD + N L Sbjct: 159 GEALFPFAKSSLDSMLPGGRAELDDAIAKIRAERGTTRIDVVGHTDRI---GSDQSNRAL 215 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---ASDPMN-----SANRRIDILV 338 S RA + + L+ G+ RI ++ G + + + +RR+ I V Sbjct: 216 SRARAETVKRYLVAHGLDAARI-RVEGAGSSQPVSHCPSGETPAVIACLQKDRRVTITV 273 >gi|330980557|gb|EGH78660.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 830 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 72/254 (28%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 ++ I I + +F + E L I L ++ + I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLNTPNIGKIVIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + + G + + D Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|302346547|ref|YP_003814845.1| OmpA family protein [Prevotella melaninogenica ATCC 25845] gi|302150388|gb|ADK96649.1| OmpA family protein [Prevotella melaninogenica ATCC 25845] Length = 653 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 34/145 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I++ + +D + PE+ L + +L + I + HTD + A N Sbjct: 478 INVPVLIDNIFYDFDKATLRPESEKALDALVNLLKENPNVTIELSAHTD---YLGSADYN 534 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-------------KIASDP----- 326 RLS RA + L G+ DR++ + G+ R +D Sbjct: 535 KRLSQRRADAVVAYLTAHGIVRDRLTPV-GYGKERPKKIRKKVTEKYPWLKENDVLTEDF 593 Query: 327 -----------MNSANRRIDILVED 340 N NRR + V Sbjct: 594 IKKLDKEKQEIANQLNRRTEFTVLR 618 >gi|119483418|ref|ZP_01618832.1| outer membrane protein F [Lyngbya sp. PCC 8106] gi|119458185|gb|EAW39307.1| outer membrane protein F [Lyngbya sp. PCC 8106] Length = 296 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 81/250 (32%), Gaps = 10/250 (4%) Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 SS+++ L + ST + E + Sbjct: 52 PSSRSQAPLVETLLFRTSEPQSSQTSTPALNPTPLSPSPTTPQVQLTSGERQQLQTQLQE 111 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + + + ++++ + R+ L D ++T + Sbjct: 112 LQQQLNTLIGRTAALETQLGISRPSETLEKRLQIVDRQLSLSDQTVPNAATPTPTRTTTS 171 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270 + G+++++ +F +++ P V+L + L + + + Sbjct: 172 TQAQTRFRASQGLVVTLPSD---VLFATNTNSLRPGASVILDTLIADLENYKGASVRVAA 228 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMN 328 HTD + A+DN LSL +A + L + SE I G+ + + +D Sbjct: 229 HTDDT---GKAQDNLSLSLQQAEAIVAYLSTAIGSEYHWVAI-GYGEGQPTVENDSTTNK 284 Query: 329 SANRRIDILV 338 NRRI++ + Sbjct: 285 QLNRRIEVAI 294 >gi|262195035|ref|YP_003266244.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262078382|gb|ACY14351.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 195 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ + L + LA++ + + + GH D N L RA + Sbjct: 69 FPLDSTDLPEDAREALAEAAPKLANNPDVHLYVDGHADQR---GTEEYNVALGERRARAV 125 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 L + GVS D + +S F R ++ + NRR+D + Sbjct: 126 SDYLTRMGVSADNLHLVS-FGESRPVSEQGTNVAMAKNRRVDFRLMR 171 >gi|34495565|ref|NP_899780.1| peptidoglycan-associated lipoprotein [Chromobacterium violaceum ATCC 12472] gi|34101420|gb|AAQ57789.1| peptidoglycan-associated lipoprotein [Chromobacterium violaceum ATCC 12472] Length = 172 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 6/108 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + + F SS E + + L + + I+G+TDA N L R Sbjct: 65 KRSVYFAFDSSAVDGEGKTTVANHADYLKGHDKKVIIQGNTDAR---GSREYNLALGQRR 121 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 A S + GV E ++ +S F + K + NRR DI+ Sbjct: 122 AESVKHAMEVLGVKESQLEAVS-FGKEKPKATGHSDADYAENRRADIV 168 >gi|330940416|gb|EGH43516.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B] Length = 830 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 72/254 (28%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 ++ I I + +F + E L I L ++ + I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLNTPNIGKIVIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + + G + + D Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|330901436|gb|EGH32855.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT] Length = 830 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 72/254 (28%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 ++ I I + +F + E L I L ++ + I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLNTPNIGKIVIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + + G + + D Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|323436227|ref|ZP_01051616.2| OmpA family protein [Dokdonia donghaensis MED134] gi|321496542|gb|EAQ37623.2| OmpA family protein [Dokdonia donghaensis MED134] Length = 256 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 19/135 (14%) Query: 222 TGILISIIDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 + I + D + FD P+ + L+K+ V+ I +R HTD+ Sbjct: 126 PPLKIELGDDLAKTLELNPIYFDFDKHNIRPDAALELEKVIAVMREYPSLKIDVRSHTDS 185 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA-------SDP 326 N LS R S + ++ G+S R+ G+ +L A ++ Sbjct: 186 R---APDAYNMSLSQRRNVSTIRYIVDQGGISMSRL-TGRGYGETQLTNACGNGIECTEE 241 Query: 327 MNSANRRIDILVEDR 341 + NRR + ++ + Sbjct: 242 EHQLNRRSEFIIVAK 256 >gi|320095241|ref|ZP_08026939.1| outer membrane protein OprF [Actinomyces sp. oral taxon 178 str. F0338] gi|319977825|gb|EFW09470.1| outer membrane protein OprF [Actinomyces sp. oral taxon 178 str. F0338] Length = 174 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 33/103 (32%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S VL E +++ GHTD+ N LS RA + Sbjct: 73 FEVDSDQLTARAKEVLDSLASEWSKAKPSTVTVTGHTDSV---ADDAHNLDLSKRRAKAV 129 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 L +G G ++ + NRR++I Sbjct: 130 GDYL--AGKVPGLSLTTDGKGEAEPIGDNETEEGRAQNRRVEI 170 >gi|296130809|ref|YP_003638059.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109] gi|296022624|gb|ADG75860.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109] Length = 198 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 13/112 (11%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +F S+ P + ++ L +++ GHTD N LS RA + Sbjct: 93 LFAFDSAELAPGAAGKIGELAAALPQ-GAAVAVDGHTDGL---GGDAVNVPLSQARAQAV 148 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP-------MNSANRRIDILVED 340 L + D + ++G + + NRR+++ V Sbjct: 149 ADALTAA--RPDLVLTVTGHGSAQPVAEETTDGLDDPSGRALNRRVEVRVTG 198 >gi|288925106|ref|ZP_06419042.1| lipoprotein PG3 [Prevotella buccae D17] gi|288338296|gb|EFC76646.1| lipoprotein PG3 [Prevotella buccae D17] Length = 238 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 58/148 (39%), Gaps = 8/148 (5%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K+ + V++ V+ V + ++ + +F + S + L K Sbjct: 86 MDKVKKEVEQQVSNAKVEEVTDANGLKAVKVTF---DSGLLFPLNKSTLSASSKTELAKF 142 Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 VL + + + I+G+TD + + N LS RA S L K GV ++G Sbjct: 143 ATVLKNDPQLAVDIQGYTDRT---GGDKINIPLSQSRAESVASYLRKQGVGSSSFKNVTG 199 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 F + ++ NRR+++ + Q Sbjct: 200 FGSANEI-ENAAISQVNRRVEVYLYASQ 226 >gi|317177353|dbj|BAJ55142.1| flagellar motor protein MotB [Helicobacter pylori F16] Length = 255 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVLVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDSINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VLM+ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLIKTRFKSHYELAANRAYRVMKVLMQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVLVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|284007554|emb|CBA73076.1| outer membrane protein A [Arsenophonus nasoniae] Length = 353 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 R+ +F+ + P V L K+ L + + + + G+TD N LS Sbjct: 227 RSDVLFEFNKHTLKPAGKVELDKLYSELTNLDPTQGRVMVLGYTDRI---GSPSYNKPLS 283 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA--N-----RRIDIL 337 RA+ L+ G+ + IS G + +A N RR++I Sbjct: 284 QKRAHEVMSYLISKGIPANAISS-QGRGEENPVTGSTCNNVKPRAALINCLAPDRRVEIE 342 Query: 338 VED 340 ++ Sbjct: 343 IQG 345 >gi|53719675|ref|YP_108661.1| OmpA family protein [Burkholderia pseudomallei K96243] gi|76810742|ref|YP_333152.1| OmpA family protein [Burkholderia pseudomallei 1710b] gi|126453035|ref|YP_001065862.1| OmpA family outer membrane protein [Burkholderia pseudomallei 1106a] gi|134282791|ref|ZP_01769494.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 305] gi|167720016|ref|ZP_02403252.1| outer membrane protein, OmpA family [Burkholderia pseudomallei DM98] gi|167739026|ref|ZP_02411800.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 14] gi|167816239|ref|ZP_02447919.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 91] gi|167824618|ref|ZP_02456089.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 9] gi|167846148|ref|ZP_02471656.1| outer membrane protein, OmpA family [Burkholderia pseudomallei B7210] gi|167894724|ref|ZP_02482126.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 7894] gi|167903126|ref|ZP_02490331.1| outer membrane protein, OmpA family [Burkholderia pseudomallei NCTC 13177] gi|167911363|ref|ZP_02498454.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 112] gi|167919383|ref|ZP_02506474.1| outer membrane protein, OmpA family [Burkholderia pseudomallei BCC215] gi|217423544|ref|ZP_03455045.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 576] gi|226196265|ref|ZP_03791848.1| outer membrane protein, OmpA family [Burkholderia pseudomallei Pakistan 9] gi|237811866|ref|YP_002896317.1| outer membrane protein, OmpA family [Burkholderia pseudomallei MSHR346] gi|242314198|ref|ZP_04813214.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 1106b] gi|254180141|ref|ZP_04886740.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 1655] gi|254188449|ref|ZP_04894960.1| outer membrane protein, OmpA family [Burkholderia pseudomallei Pasteur 52237] gi|254198064|ref|ZP_04904486.1| outer membrane protein, OmpA family [Burkholderia pseudomallei S13] gi|254259492|ref|ZP_04950546.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 1710a] gi|254297974|ref|ZP_04965427.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 406e] gi|52210089|emb|CAH36063.1| OmpA family protein [Burkholderia pseudomallei K96243] gi|76580195|gb|ABA49670.1| OmpA family protein [Burkholderia pseudomallei 1710b] gi|126226677|gb|ABN90217.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 1106a] gi|134245877|gb|EBA45968.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 305] gi|157808001|gb|EDO85171.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 406e] gi|157936128|gb|EDO91798.1| outer membrane protein, OmpA family [Burkholderia pseudomallei Pasteur 52237] gi|169654805|gb|EDS87498.1| outer membrane protein, OmpA family [Burkholderia pseudomallei S13] gi|184210681|gb|EDU07724.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 1655] gi|217393402|gb|EEC33423.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 576] gi|225931663|gb|EEH27667.1| outer membrane protein, OmpA family [Burkholderia pseudomallei Pakistan 9] gi|237506719|gb|ACQ99037.1| outer membrane protein, OmpA family [Burkholderia pseudomallei MSHR346] gi|242137437|gb|EES23839.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 1106b] gi|254218181|gb|EET07565.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 1710a] Length = 236 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 16/116 (13%) Query: 234 TPMFDKSSSI---PLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289 MF + + L ++ + L + +SI G+TD N +LS Sbjct: 118 DAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRL---GSDAYNRQLSQ 174 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDIL 337 RA + L+ +GV D + G + D + NRR++++ Sbjct: 175 ARAKTVGDYLIAAGVPADSVHA-EGRGASDPLVQCDQRERAALIACLAPNRRVEVV 229 >gi|88861307|ref|ZP_01135938.1| outer membrane protein A [Pseudoalteromonas tunicata D2] gi|88816686|gb|EAR26510.1| outer membrane protein A [Pseudoalteromonas tunicata D2] Length = 358 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 9/106 (8%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 +FD S L+ + LA + + ++ G+TD+ N +L+L RA Sbjct: 252 FALFDFDKSAVKE--TQALKDLAAHLAANPQAQAAVTGYTDSQ---GSKEYNEKLALRRA 306 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 + + L +GV+ ++ + L ++ + NRR+ I Sbjct: 307 NAIAKYLTANGVNASQL-TVKSVGETDLFASNATIAERLNNRRVTI 351 >gi|188527339|ref|YP_001910026.1| flagellar motor protein MotB [Helicobacter pylori Shi470] gi|188143579|gb|ACD47996.1| flagellar motor protein MotB [Helicobacter pylori Shi470] Length = 255 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDAINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLDKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|91784820|ref|YP_560026.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans LB400] gi|91688774|gb|ABE31974.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans LB400] Length = 215 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 18/119 (15%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD +I P L + + + + G+TD + N RLSL Sbjct: 97 QADALFDFDKAILKPGGKEKLDDLASKIGSLNLEVVVATGYTDRI---GSDKYNDRLSLR 153 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338 RA + L+ G+ +RI G N N RR+++ V Sbjct: 154 RAQAVKAYLVSKGIESNRIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209 >gi|300722398|ref|YP_003711684.1| hypothetical protein XNC1_1421 [Xenorhabdus nematophila ATCC 19061] gi|297628901|emb|CBJ89484.1| required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA [Xenorhabdus nematophila ATCC 19061] Length = 176 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 36/110 (32%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 N F E +L K L + ++I GH D N L Sbjct: 70 NNNIVYFGFDKYDINSEFAQMLDKHAAFLRTNPSVKVTIEGHADER---GTPEYNIALGE 126 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D++ I + + + + NRR I+ Sbjct: 127 RRANAVKMYLQGKGVSADQL-AIVSYGKEKPAVLGHDEAAYAKNRRAVIV 175 >gi|206563399|ref|YP_002234162.1| putative peptidoglycan-associated lipoprotein [Burkholderia cenocepacia J2315] gi|198039439|emb|CAR55406.1| putative peptidoglycan-associated lipoprotein [Burkholderia cenocepacia J2315] Length = 163 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD PE +LQ + L + I+G+TD + N L R+ + Sbjct: 62 FDFDQYSVKPEFQSLLQAHADYLRSHPARHVLIQGNTDER---GTSEYNLALGQRRSQAV 118 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 L GV ++ +S + + + NRR D++ Sbjct: 119 ASALQTLGVPATQLEAVS-LGKEKPVALGHDEEAWAQNRRADLV 161 >gi|296410006|gb|ADH15779.1| OmpP6 [Haemophilus influenzae] Length = 145 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 7/135 (5%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 ++ +T + + + NT F E + +L L Sbjct: 13 AACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 72 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + + G+TD N L RA + L GV ++ +S + + Sbjct: 73 TPAAKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKP 128 Query: 321 KIASDPMNS--ANRR 333 + + NRR Sbjct: 129 AVLGHDEAAYSKNRR 143 >gi|85705019|ref|ZP_01036119.1| OmpA domain protein [Roseovarius sp. 217] gi|85670341|gb|EAQ25202.1| OmpA domain protein [Roseovarius sp. 217] Length = 311 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P L+ + L + GHTD++ N LS RA + Sbjct: 204 FGSGDNALGPGPHPSLEALAAYLLTKPNTRVALVGHTDST---GGLEGNIALSRSRAEAV 260 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 VL + GV ++ G + + + NRR++ ++ D Sbjct: 261 LSVLTEIHGVPATQLEA-HGIGYLAPLAPNTTGDGRESNRRVEAVLLD 307 >gi|296159971|ref|ZP_06842791.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] gi|295889717|gb|EFG69515.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] Length = 215 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 18/119 (15%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD +I P L + + + + G+TD + N RLSL Sbjct: 97 QADALFDFDKAILKPGGKEKLDDLASKIGALNLEVVVATGYTDRI---GSDKYNDRLSLR 153 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338 RA + L+ G+ +RI G N N RR+++ V Sbjct: 154 RAQAVKAYLVSKGIESNRIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209 >gi|262404181|ref|ZP_06080736.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp. RC586] gi|262349213|gb|EEY98351.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp. RC586] Length = 172 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + T F ++ + +L L + ++I GH D N L Sbjct: 66 ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTIEGHADER---GTPEYNIALGE 122 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + + L GV D++S +S + + + SD + NRR ++ Sbjct: 123 RRAQAVAKYLEALGVQADQVSIVS-YGEEKPLVLGQSDEAYAKNRRAVLV 171 >gi|121600552|ref|YP_992694.1| ompA family protein [Burkholderia mallei SAVP1] gi|124384797|ref|YP_001026510.1| ompA family protein [Burkholderia mallei NCTC 10229] gi|126450730|ref|YP_001080211.1| ompA family protein [Burkholderia mallei NCTC 10247] gi|167002004|ref|ZP_02267794.1| OmpA family protein [Burkholderia mallei PRL-20] gi|238562245|ref|ZP_00440713.2| OmpA family protein [Burkholderia mallei GB8 horse 4] gi|254177630|ref|ZP_04884285.1| ompA family protein [Burkholderia mallei ATCC 10399] gi|254199515|ref|ZP_04905881.1| OmpA family protein [Burkholderia mallei FMH] gi|254205830|ref|ZP_04912182.1| OmpA family protein [Burkholderia mallei JHU] gi|254358770|ref|ZP_04975043.1| OmpA family protein [Burkholderia mallei 2002721280] gi|121229362|gb|ABM51880.1| ompA family protein [Burkholderia mallei SAVP1] gi|124292817|gb|ABN02086.1| ompA family protein [Burkholderia mallei NCTC 10229] gi|126243600|gb|ABO06693.1| ompA family protein [Burkholderia mallei NCTC 10247] gi|147749111|gb|EDK56185.1| OmpA family protein [Burkholderia mallei FMH] gi|147753273|gb|EDK60338.1| OmpA family protein [Burkholderia mallei JHU] gi|148027897|gb|EDK85918.1| OmpA family protein [Burkholderia mallei 2002721280] gi|160698669|gb|EDP88639.1| ompA family protein [Burkholderia mallei ATCC 10399] gi|238522977|gb|EEP86418.1| OmpA family protein [Burkholderia mallei GB8 horse 4] gi|243062249|gb|EES44435.1| OmpA family protein [Burkholderia mallei PRL-20] Length = 236 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 16/116 (13%) Query: 234 TPMFDKSSSI---PLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289 MF + + L ++ + L + +SI G+TD N +LS Sbjct: 118 DAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRL---GSDAYNRQLSQ 174 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSA-------NRRIDIL 337 RA + L+ +GV D + G + D +A NRR++++ Sbjct: 175 ARAKTVGDYLIAAGVPADSVHA-EGRGASDPLVQCDQRERAALIACLSPNRRVEVV 229 >gi|82703306|ref|YP_412872.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196] gi|82411371|gb|ABB75480.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196] Length = 225 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 49/164 (29%), Gaps = 24/164 (14%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 DL K + + IS+ + +FD + PE L Sbjct: 67 DLLPKPEKKVEAPAPEPTPAPAPAPVYTEPEKISLSADQ---LFDFDKANLRPEGKQTLD 123 Query: 254 KIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISK 311 + L + G+ D N +LS+ RA S L+ + G+ DRI Sbjct: 124 DLVAKLGGVKYDTIVAIGYADRL---GSDAYNKKLSMRRAESVKAYLVNEKGIPADRIF- 179 Query: 312 ISGFAHHRLKIASDPMNSAN-------------RRIDILVEDRQ 342 I G D N RR+++ V + Sbjct: 180 IDGKGEANPV-TGDTCKG-NKKTKALIACLQPDRRVEVEVAGTK 221 >gi|28901295|ref|NP_800950.1| hypothetical protein VPA1440 [Vibrio parahaemolyticus RIMD 2210633] gi|153835951|ref|ZP_01988618.1| OmpA family protein [Vibrio parahaemolyticus AQ3810] gi|260362852|ref|ZP_05775721.1| OmpA family protein [Vibrio parahaemolyticus K5030] gi|260880140|ref|ZP_05892495.1| OmpA family protein [Vibrio parahaemolyticus AN-5034] gi|260895257|ref|ZP_05903753.1| OmpA family protein [Vibrio parahaemolyticus Peru-466] gi|260900609|ref|ZP_05909004.1| OmpA family protein [Vibrio parahaemolyticus AQ4037] gi|28809808|dbj|BAC62783.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|149750705|gb|EDM61450.1| OmpA family protein [Vibrio parahaemolyticus AQ3810] gi|308085641|gb|EFO35336.1| OmpA family protein [Vibrio parahaemolyticus Peru-466] gi|308091737|gb|EFO41432.1| OmpA family protein [Vibrio parahaemolyticus AN-5034] gi|308107011|gb|EFO44551.1| OmpA family protein [Vibrio parahaemolyticus AQ4037] gi|308112285|gb|EFO49825.1| OmpA family protein [Vibrio parahaemolyticus K5030] Length = 301 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 39/292 (13%), Positives = 87/292 (29%), Gaps = 33/292 (11%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + + I + P + + ++ ++ + +D I + + Sbjct: 34 FSDVNVSKF-LISECLAPQREIHIAVAEHFDFDKFNIREADATSLDAFIRDIQGLSGRIT 92 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 +G T+ K + N QS D K + + + + Sbjct: 93 IVGHTDYKGSNE---YNDALSLRRAQSVAAYLKQQLDPTFYDWEIKHFGETQPLKLDTSD 149 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 ++ + + ++ ++ V + Sbjct: 150 QARAENRRAYVMFEEAQKYDEMPFCEPPKPERKVYMTMTPH------------------- 190 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S E + L E L I + GHTD + N +L+ RA Sbjct: 191 ---FDFDQSELKAEDLTQLDDFIEQLQGLEGSILVAGHTDQV---GLLSYNEKLAERRAQ 244 Query: 294 SAYQVLMKSGVSEDRIS-KISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342 + + L K+ + R+ ++ F + I + N+ NRR I+ ++ + Sbjct: 245 TVVEYL-KTKLDASRLVWEVKAFGELQPVINQTTSEANALNRRAFIVFKESE 295 >gi|15641837|ref|NP_231469.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585809|ref|ZP_01675603.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 2740-80] gi|121727622|ref|ZP_01680725.1| peptidoglycan-associated lipoprotein [Vibrio cholerae V52] gi|147673661|ref|YP_001217371.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O395] gi|153214301|ref|ZP_01949318.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 1587] gi|153800452|ref|ZP_01955038.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-3] gi|153819810|ref|ZP_01972477.1| peptidoglycan-associated lipoprotein [Vibrio cholerae NCTC 8457] gi|153824298|ref|ZP_01976965.1| peptidoglycan-associated lipoprotein [Vibrio cholerae B33] gi|153826235|ref|ZP_01978902.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-2] gi|153828567|ref|ZP_01981234.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 623-39] gi|227081964|ref|YP_002810515.1| peptidoglycan-associated lipoprotein [Vibrio cholerae M66-2] gi|229508068|ref|ZP_04397573.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae BX 330286] gi|229511693|ref|ZP_04401172.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae B33] gi|229518832|ref|ZP_04408275.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae RC9] gi|229520296|ref|ZP_04409722.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae TM 11079-80] gi|229529142|ref|ZP_04418532.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae 12129(1)] gi|229607629|ref|YP_002878277.1| OmpA precursor [Vibrio cholerae MJ-1236] gi|254285225|ref|ZP_04960190.1| peptidoglycan-associated lipoprotein [Vibrio cholerae AM-19226] gi|254848921|ref|ZP_05238271.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MO10] gi|255745403|ref|ZP_05419352.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholera CIRS 101] gi|262169824|ref|ZP_06037515.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae RC27] gi|297579354|ref|ZP_06941282.1| peptidoglycan-associated lipoprotein [Vibrio cholerae RC385] gi|298498126|ref|ZP_07007933.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MAK 757] gi|9656362|gb|AAF94983.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549947|gb|EAX59965.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 2740-80] gi|121630009|gb|EAX62416.1| peptidoglycan-associated lipoprotein [Vibrio cholerae V52] gi|124115449|gb|EAY34269.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 1587] gi|124124078|gb|EAY42821.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-3] gi|126509649|gb|EAZ72243.1| peptidoglycan-associated lipoprotein [Vibrio cholerae NCTC 8457] gi|126518179|gb|EAZ75404.1| peptidoglycan-associated lipoprotein [Vibrio cholerae B33] gi|146315544|gb|ABQ20083.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O395] gi|148875962|gb|EDL74097.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 623-39] gi|149740000|gb|EDM54175.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-2] gi|150424497|gb|EDN16433.1| peptidoglycan-associated lipoprotein [Vibrio cholerae AM-19226] gi|227009852|gb|ACP06064.1| peptidoglycan-associated lipoprotein [Vibrio cholerae M66-2] gi|227013734|gb|ACP09944.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O395] gi|229332916|gb|EEN98402.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae 12129(1)] gi|229342662|gb|EEO07654.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae TM 11079-80] gi|229343521|gb|EEO08496.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae RC9] gi|229351658|gb|EEO16599.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae B33] gi|229355573|gb|EEO20494.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae BX 330286] gi|229370284|gb|ACQ60707.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae MJ-1236] gi|254844626|gb|EET23040.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MO10] gi|255737233|gb|EET92629.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholera CIRS 101] gi|262022058|gb|EEY40768.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae RC27] gi|297536948|gb|EFH75781.1| peptidoglycan-associated lipoprotein [Vibrio cholerae RC385] gi|297542459|gb|EFH78509.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MAK 757] gi|327484390|gb|AEA78797.1| 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor [Vibrio cholerae LMA3894-4] Length = 172 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + T F ++ + +L L + ++I GH D N L Sbjct: 66 ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADER---GTPEYNIALGE 122 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV ++S +S + + + + NRR ++ Sbjct: 123 RRAQAVAKYLEALGVQAGQLSIVS-YGEEKPLVLGQSEEAYAKNRRAVLV 171 >gi|207108745|ref|ZP_03242907.1| flagellar motor protein MotB [Helicobacter pylori HPKX_438_CA4C1] Length = 150 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 59/117 (50%), Gaps = 7/117 (5%) Query: 227 SIIDQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASP-FRNIAR 282 SI+ ++ +F+ + S + ++ L++I +++ + I++RG TD +P + + Sbjct: 6 SILKLPSSLLFENATSDAINQDMMLYLERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFK 65 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 ++ L+ +RAY +VL++ GV +++ S + +D N R++I Sbjct: 66 SHYELAANRAYRVMKVLIQYGVDPNQL-SFSSYGSTNPIAPNDSLENRMKNNRVEIF 121 >gi|167623057|ref|YP_001673351.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167353079|gb|ABZ75692.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4] Length = 365 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 9/152 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 ++ L V + + F +S+ + + Sbjct: 211 DSDNDGVTDDLDQCPNTPTTYKVDAYGCPIFLEVESQLDIEAK-FANNSAEVEKSSYGAI 269 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRIS 310 +++ + ++I G + A N LS RA S ++L+ + ++ R+S Sbjct: 270 RELATYMKQHPNAEVTISGFASNT---GKADYNMDLSERRAASVAEILINEYDIAPGRVS 326 Query: 311 KISGFAHHRLKIASDPMN--SANRRIDILVED 340 G+ R + + NRRI+ V D Sbjct: 327 S-KGYGITRPLMEGSSAEANAVNRRIEAHVTD 357 >gi|16265946|gb|AAL16679.1|AF358690_1 flagellar motor rotation protein [Helicobacter hepaticus] Length = 98 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 8/100 (8%) Query: 238 DKSSSIPL-PETIVVLQKIGEVLAHSTEV--ISIRGHTDA--SPFRNIARDNWRLSLDRA 292 D S+ + + LQ++ ++ + I +RG+TD P + +DN+ LS R+ Sbjct: 1 DSGSAEINNSDVFLYLQRMSAIIKKLPDYVKIDVRGYTDNAPLPVGSRYKDNYELSSARS 60 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332 S + L+K+G+S +RI SG+ H+ +D + NR Sbjct: 61 LSVMKNLIKNGISPERI-SFSGYGEHQAVAPNDS--ALNR 97 >gi|317014225|gb|ADU81661.1| flagellar motor protein MotB [Helicobacter pylori Gambia94/24] Length = 257 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G S++ ++ +F+ + S + ++ +++I Sbjct: 98 TTIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 67.3 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKT 98 >gi|307130110|ref|YP_003882126.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya dadantii 3937] gi|16116638|emb|CAC82710.1| peptidoglycan-associated lipoprotein [Erwinia chrysanthemi] gi|306527639|gb|ADM97569.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya dadantii 3937] Length = 168 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 7/117 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 + + + + N FD P+ +L L + ++ GH D Sbjct: 55 LQMQELQRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTVEGHADER---GTPE 111 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 N L RA + L GVS D+I + + + + + S NRR ++ Sbjct: 112 YNIALGERRANAVQMYLQGKGVSADQI-SVVSYGKEKPAVLGHDEAAWSKNRRAVLV 167 >gi|15611819|ref|NP_223470.1| flagellar motor protein MotB [Helicobacter pylori J99] gi|298736519|ref|YP_003729045.1| chemotaxis protein MotB [Helicobacter pylori B8] gi|12229872|sp|Q9ZL29|MOTB_HELPJ RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein MotB gi|4155316|gb|AAD06331.1| FLAGELLAR MOTOR PROTEIN [Helicobacter pylori J99] gi|298355709|emb|CBI66581.1| chemotaxis protein MotB [Helicobacter pylori B8] Length = 257 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G S++ ++ +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|295691255|ref|YP_003594948.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756] gi|295433158|gb|ADG12330.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756] Length = 406 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 31/279 (11%), Positives = 74/279 (26%), Gaps = 11/279 (3%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSI-DEHITKNSVDLKIGSTNQKKQYQ 125 + + + G + N++D+ + ++ + Sbjct: 130 DSWTLMANVIYDFAPGAWFNPFLGAGVGINRLDVKTLGQFSNVPALSDPTIPNPAIQNLT 189 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE---ENYFLPPLSKEK 182 ++++ + K + + + ++ + K++ Sbjct: 190 VDDDDLAVAWQAIAGASIKATDKLNIDITYRYITGSEHAWQSQGSSALQPGAFAGQYKDQ 249 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 L + + + + F S Sbjct: 250 SLTVGLRYSFASPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAFEAREFIVYFPFDQS 309 Query: 243 IPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + PE V+ + + I + GHTD + N +LS RA + L+ Sbjct: 310 VLTPEAQSVVTEAAKYSNDGKATKIIVVGHTDT---SGSPKYNVKLSERRAKAVADALVS 366 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 GVS+D + + +A+ NRR I + Sbjct: 367 QGVSKD-VLGVDWKGESAPAVATGDGVKEPLNRRSTISI 404 >gi|255019464|ref|ZP_05291566.1| OmpA/MotB [Acidithiobacillus caldus ATCC 51756] gi|254971096|gb|EET28556.1| OmpA/MotB [Acidithiobacillus caldus ATCC 51756] Length = 93 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 6/71 (8%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + G+ N +LS RA S Q L + GV DR+ + G +++ ++ Sbjct: 15 VNGYCSKV---GTYAYNLKLSKLRAESVAQYLERHGVPRDRMV-LKGHSYNDPVASNATP 70 Query: 328 NSA--NRRIDI 336 N+R++I Sbjct: 71 EGRFLNQRVEI 81 >gi|251790481|ref|YP_003005202.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya zeae Ech1591] gi|247539102|gb|ACT07723.1| peptidoglycan-associated lipoprotein [Dickeya zeae Ech1591] Length = 168 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 7/117 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 + + + + N FD P+ +L L + ++ GH D Sbjct: 55 LQMQELQRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTVEGHADER---GTPE 111 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 N L RA + L GVS D+I + + + + + S NRR ++ Sbjct: 112 YNIALGERRANAVQMYLQGKGVSADQI-SVVSYGKEKPAVLGHDEAAWSKNRRAVLV 167 >gi|121998997|ref|YP_001003784.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1] gi|121590402|gb|ABM62982.1| OmpA/MotB domain protein [Halorhodospira halophila SL1] Length = 208 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 13/176 (7%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 E+ P + + ++ + A+ + + +++D Sbjct: 34 EDPDAVPGEEAEDAEIETEDFDPTEAEALEDPDDAEEERLERARAEGLDPDDPLDAAVLD 93 Query: 231 QRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 + +P+ F SS + I VL+ E L + ++I GHTD Sbjct: 94 EPESPLATRRVHFAFDSSNIRDDDIPVLEAHAEFLREHPDERMTIEGHTDER---GSREY 150 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 N L RA + ++L +G D++ ++ + + +++ + NRR ++L Sbjct: 151 NLALGERRAEAVERLLRANGARSDQL-EVVSYGEEDPLVDESNEDAWAENRRAELL 205 >gi|107027335|ref|YP_624846.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|105896709|gb|ABF79873.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] Length = 119 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 6/109 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRN-IARDNWRLSLDRAY 293 + P ++ IG +A S + + G+TD P +N LS RA Sbjct: 12 YASGDVTVEPWWASMMATIGRTIAASVPGAYVQVVGYTDNVPAGAISRGNNQALSEARAR 71 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 ++ +GV IS +G + S NRR+++ V + Sbjct: 72 EVARIFAAAGVPMQNISA-TGQGDADPLADNGTAPGRSRNRRVEVTVSN 119 >gi|157374997|ref|YP_001473597.1| OmpA domain-containing protein [Shewanella sediminis HAW-EB3] gi|157317371|gb|ABV36469.1| OmpA domain protein [Shewanella sediminis HAW-EB3] Length = 179 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + + FD S + VLQ G L V I GH D N L Sbjct: 73 KEHVIYFDFDRSSVSMQFAEVLQAHGNYLVEHPNVRLMIEGHADER---GTPEYNIALGE 129 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + + L GV ++S +S + + +D + NRR ++ Sbjct: 130 RRAKAVAKYLQGMGVLPSQMSIVS-YGEEKPLDMSRTDDGFAINRRAVLV 178 >gi|302339083|ref|YP_003804289.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293] gi|301636268|gb|ADK81695.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293] Length = 384 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 11/154 (7%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L + + S + +L E G+++++ + F + LP+ + Sbjct: 239 ADLSEGNTAVHEAGSDGSDRDDDTSILVEERSEGVVLTLPNIH----FKPDEAEILPQEV 294 Query: 250 VVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L ++ VL+ + + GHT LS+DRA L + G+ E R Sbjct: 295 SRLDELARVLSQIRDTSFLVVGHTADV---GTKESQKELSVDRARRIISELSQRGLDESR 351 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 G + ++D NRR++I + + Sbjct: 352 FL-YDGVGGTQPVASNDNEEGRKKNRRVEIFLLE 384 >gi|329850857|ref|ZP_08265702.1| ompA family protein [Asticcacaulis biprosthecum C19] gi|328841172|gb|EGF90743.1| ompA family protein [Asticcacaulis biprosthecum C19] Length = 263 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 12/246 (4%) Query: 99 DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158 L E + SV + + LS + + L + L Sbjct: 17 TLPGVESDVRASVVKALADNGFSDVRAEVSGQTVTLSVGDTVANPVSHLEQAKAVVTKLD 76 Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI----SSTLSGLVADNIVKG 214 ++ E + + + ++ +S L + DN Sbjct: 77 GKVSEVHFLSMTEATPVQVAAANPSALKLPTEVIKGEKATTIVATNSNLPAVAGDNARDA 136 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHT 272 + IS + + + + ++ +L ++ +V+A + I G+T Sbjct: 137 AIEVARSCDDRISAAMGKRRLEYRFGTYELIGDSEPLLDELSKVVADCPADVKLIIAGYT 196 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSA 330 DA+ A+ N +SL RA +A L+K GV RI ++ G + +A Sbjct: 197 DAT---GDAKANQLISLARAQTAADGLVKRGVDAGRI-QVQGMGGAAPVADNATPEGRAA 252 Query: 331 NRRIDI 336 NRRI I Sbjct: 253 NRRIVI 258 >gi|312881847|ref|ZP_07741618.1| sodium type flagellar protein MotY precursor [Vibrio caribbenthicus ATCC BAA-2122] gi|309370493|gb|EFP97974.1| sodium type flagellar protein MotY precursor [Vibrio caribbenthicus ATCC BAA-2122] Length = 293 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 93/297 (31%), Gaps = 24/297 (8%) Query: 46 AFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEH 105 FF + +++ + Y ++ E + Sbjct: 12 CFF--FFSLSSWGLEK-----HYVAKPMQSQWQMIANTPLECRMVHPIPNYGDAVFSSYA 64 Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 K ++D ++ Q + + S K + R ++ Sbjct: 65 SKKINLDFELKMKRPMGQTRDVSLVSMPPSWRPGDRADKLTTLRFFQQFDGYVGGQTAWN 124 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + E P S ++ + + + +SS L + + + + Sbjct: 125 ILGELEKGRYPTFSYQEWRSRNERIEVA-----LSSVLFQQSYNVFSDCIANLLSYSFED 179 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARD 283 I+ +D+SS ++ L KI E + + ++ + +TD ++ + Sbjct: 180 IAFTILH----YDRSSVELNKQSQKRLAKIAEYIKQTKDIDLVLVSTYTDNEDSKSAS-- 233 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 LS RA + + G+ EDRI ++ G+ R + NRR+ I + Sbjct: 234 -QGLSEQRAKALQRYFKSLGLPEDRI-QVQGYGKRRPIDDNASPIGKDRNRRVVISL 288 >gi|260432166|ref|ZP_05786137.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415994|gb|EEX09253.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157] Length = 299 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 8/111 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + L + L+ + V ++ GHTD + + N +S R Sbjct: 191 DDLSFESGAVALGEGPFASLALLAGYLSDNPGVRLALVGHTDDT---GDLQANINVSTRR 247 Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 A + L++ GV +R+ G + ++ NRR++ ++ Sbjct: 248 AQAVRARLIEAHGVDPERVEA-QGVGYLSPLTSNATPEGRELNRRVEAVLL 297 >gi|260581134|ref|ZP_05848955.1| outer membrane protein P5 [Haemophilus influenzae RdAW] gi|260092263|gb|EEW76205.1| outer membrane protein P5 [Haemophilus influenzae RdAW] Length = 353 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 206 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 265 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS +RA S + GV+ D IS +G+ Sbjct: 266 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 321 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 322 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 353 >gi|229846196|ref|ZP_04466308.1| Outer membrane protein P5 [Haemophilus influenzae 7P49H1] gi|229811200|gb|EEP46917.1| Outer membrane protein P5 [Haemophilus influenzae 7P49H1] Length = 359 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 212 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 271 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS +RA S + GV+ D IS +G+ Sbjct: 272 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 327 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 328 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 359 >gi|187251682|ref|YP_001876164.1| outer membrane protein [Elusimicrobium minutum Pei191] gi|186971842|gb|ACC98827.1| Outer membrane protein [Elusimicrobium minutum Pei191] Length = 172 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 39/136 (28%), Gaps = 13/136 (9%) Query: 215 VLFETTRTGILISIIDQR---NTPMFDKSSSIPLPETIVVLQKIGEVLAHST----EVIS 267 V T ++I + + F VL ++ T I Sbjct: 41 VDVVVEETPVIIDVQNTEIALRQVNFALDKYNLSDAAKKVLADNAALIKTKTANAAFNIV 100 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + GH D N L RA + GV I +S + + Sbjct: 101 VEGHCDER---GTISYNIALGEKRANEVKNYYTRLGVPAKNIVTVS-YGEEKPLCYDATE 156 Query: 328 N--SANRRIDILVEDR 341 N + NRR + ++ + Sbjct: 157 NCYAKNRRAETVLTVK 172 >gi|145641242|ref|ZP_01796822.1| Outer membrane protein P5 [Haemophilus influenzae R3021] gi|145274079|gb|EDK13945.1| Outer membrane protein P5 [Haemophilus influenzae 22.4-21] Length = 358 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 211 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 270 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS +RA S + GV+ D IS +G+ Sbjct: 271 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 326 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 327 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 358 >gi|145639315|ref|ZP_01794921.1| Outer membrane protein P5 [Haemophilus influenzae PittII] gi|145271618|gb|EDK11529.1| Outer membrane protein P5 [Haemophilus influenzae PittII] Length = 361 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 214 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 273 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS +RA S + GV+ D IS +G+ Sbjct: 274 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 329 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 330 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 361 >gi|145631210|ref|ZP_01786983.1| Outer membrane protein P5 [Haemophilus influenzae R3021] gi|144983137|gb|EDJ90632.1| Outer membrane protein P5 [Haemophilus influenzae R3021] Length = 314 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 167 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 226 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS +RA S + GV+ D IS +G+ Sbjct: 227 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 282 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 283 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 314 >gi|145627861|ref|ZP_01783662.1| Outer membrane protein P5 [Haemophilus influenzae 22.1-21] gi|144979636|gb|EDJ89295.1| Outer membrane protein P5 [Haemophilus influenzae 22.1-21] Length = 358 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 211 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 270 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS +RA S + GV+ D IS +G+ Sbjct: 271 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 326 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 327 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 358 >gi|16273088|ref|NP_439322.1| outer membrane protein P5 [Haemophilus influenzae Rd KW20] gi|1171899|sp|P43840|OMP51_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; Flags: Precursor gi|1574091|gb|AAC22819.1| outer membrane protein P5 (ompA) [Haemophilus influenzae Rd KW20] Length = 353 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 206 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 265 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS +RA S + GV+ D IS +G+ Sbjct: 266 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 321 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 322 TGATCDQVKGRKALIACFAPDRRVEIAVNGTK 353 >gi|319954930|ref|YP_004166197.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319423590|gb|ADV50699.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 366 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 13/109 (11%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAY 296 S+ E ++ + + + HTD+ + N LS RA + Sbjct: 259 SGSATLTSEAKSIIDNRLMPVLAQNPGVKVELASHTDSQ---GASSSNQDLSERRAKAVA 315 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 L+ GV+ + +G+ +L + ++ANRR + Sbjct: 316 DYLISKGVNSSLLVA-NGYGETKLLNRCKDGVSCTAREHAANRRTQFRL 363 >gi|51595793|ref|YP_069984.1| outer membrane protein A [Yersinia pseudotuberculosis IP 32953] gi|108806724|ref|YP_650640.1| outer membrane protein A [Yersinia pestis Antiqua] gi|108812705|ref|YP_648472.1| outer membrane protein A [Yersinia pestis Nepal516] gi|145598823|ref|YP_001162899.1| outer membrane protein A [Yersinia pestis Pestoides F] gi|149366590|ref|ZP_01888624.1| putative outer membrane porin A protein [Yersinia pestis CA88-4125] gi|162418551|ref|YP_001607555.1| outer membrane protein A [Yersinia pestis Angola] gi|165924613|ref|ZP_02220445.1| outer membrane protein A [Yersinia pestis biovar Orientalis str. F1991016] gi|165940134|ref|ZP_02228667.1| outer membrane protein A [Yersinia pestis biovar Orientalis str. IP275] gi|166011945|ref|ZP_02232843.1| outer membrane protein A [Yersinia pestis biovar Antiqua str. E1979001] gi|166211728|ref|ZP_02237763.1| outer membrane protein A [Yersinia pestis biovar Antiqua str. B42003004] gi|167402334|ref|ZP_02307802.1| outer membrane protein A [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419876|ref|ZP_02311629.1| outer membrane protein A [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424140|ref|ZP_02315893.1| outer membrane protein A [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024855|ref|YP_001721360.1| outer membrane protein A [Yersinia pseudotuberculosis YPIII] gi|186894876|ref|YP_001871988.1| outer membrane protein A [Yersinia pseudotuberculosis PB1/+] gi|218928581|ref|YP_002346456.1| outer membrane protein A [Yersinia pestis CO92] gi|229841410|ref|ZP_04461569.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843520|ref|ZP_04463663.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar Orientalis str. India 195] gi|229894379|ref|ZP_04509562.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis Pestoides A] gi|270486903|ref|ZP_06203977.1| outer membrane protein A [Yersinia pestis KIM D27] gi|294503419|ref|YP_003567481.1| putative outer membrane porin A protein [Yersinia pestis Z176003] gi|55976558|sp|Q8ZG77|OMPA_YERPE RecName: Full=Outer membrane protein A; Flags: Precursor gi|55977792|sp|P38399|OMPA_YERPS RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II; Flags: Precursor gi|51589075|emb|CAH20693.1| putative outer membrane porin A protein [Yersinia pseudotuberculosis IP 32953] gi|108776353|gb|ABG18872.1| outer membrane porin A protein [Yersinia pestis Nepal516] gi|108778637|gb|ABG12695.1| putative outer membrane porin A protein [Yersinia pestis Antiqua] gi|115347192|emb|CAL20086.1| putative outer membrane porin A protein [Yersinia pestis CO92] gi|145210519|gb|ABP39926.1| outer membrane porin A protein [Yersinia pestis Pestoides F] gi|149290964|gb|EDM41039.1| putative outer membrane porin A protein [Yersinia pestis CA88-4125] gi|162351366|gb|ABX85314.1| outer membrane protein A [Yersinia pestis Angola] gi|165911957|gb|EDR30601.1| outer membrane protein A [Yersinia pestis biovar Orientalis str. IP275] gi|165923673|gb|EDR40805.1| outer membrane protein A [Yersinia pestis biovar Orientalis str. F1991016] gi|165989112|gb|EDR41413.1| outer membrane protein A [Yersinia pestis biovar Antiqua str. E1979001] gi|166207499|gb|EDR51979.1| outer membrane protein A [Yersinia pestis biovar Antiqua str. B42003004] gi|166962617|gb|EDR58638.1| outer membrane protein A [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048300|gb|EDR59708.1| outer membrane protein A [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056989|gb|EDR66752.1| outer membrane protein A [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751389|gb|ACA68907.1| OmpA domain protein transmembrane region-containing protein [Yersinia pseudotuberculosis YPIII] gi|186697902|gb|ACC88531.1| OmpA domain protein transmembrane region-containing protein [Yersinia pseudotuberculosis PB1/+] gi|229689128|gb|EEO81191.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar Orientalis str. India 195] gi|229697776|gb|EEO87823.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703777|gb|EEO90793.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis Pestoides A] gi|262361462|gb|ACY58183.1| putative outer membrane porin A protein [Yersinia pestis D106004] gi|262365389|gb|ACY61946.1| putative outer membrane porin A protein [Yersinia pestis D182038] gi|270335407|gb|EFA46184.1| outer membrane protein A [Yersinia pestis KIM D27] gi|294353878|gb|ADE64219.1| putative outer membrane porin A protein [Yersinia pestis Z176003] gi|320015699|gb|ADV99270.1| outer membrane protein A [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 353 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L+ + + G D N LS Sbjct: 225 KSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 281 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+I+ G + P + +RR++I Sbjct: 282 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 340 Query: 338 VED 340 V+ Sbjct: 341 VKG 343 >gi|159163741|pdb|2AIZ|P Chain P, Solution Structure Of Peptidoglycan Associated Lipoprotein From Haemophilus Influenza Bound To Udp-N-Acetylmuramoyl-L- Alanyl-D-Glutamyl-Meso-2,6-Diaminopimeloyl-D-Alanyl-D- Alanine Length = 134 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 7/129 (5%) Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266 ++ +T + + + NT F E + +L L + + Sbjct: 5 NNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKV 64 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + G+TD N L RA + L GV ++ +S + + + Sbjct: 65 LVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHD 120 Query: 327 MNS--ANRR 333 + NRR Sbjct: 121 EAAYSKNRR 129 >gi|56698574|ref|YP_168951.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3] gi|56680311|gb|AAV96977.1| OmpA domain protein [Ruegeria pomeroyi DSS-3] Length = 304 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F S L ++ ++L+ + E+ + GHTD N LS RA + Sbjct: 200 FATGSDALGEGPFDTLAELAQLLSANAELRLVLVGHTDTV---GGLEPNIELSRKRAGAV 256 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L+ + G+ D+IS G + ++ NRR++ ++ Sbjct: 257 RARLVEEYGIPADQISA-DGVGYLAPIASNLTPEGREANRRVEAVMLS 303 >gi|257483657|ref|ZP_05637698.1| OmpA domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331012188|gb|EGH92244.1| OmpA domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 830 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 ++ I I + +F + E L I L + + I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + + G + + D Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|32035883|ref|ZP_00135676.1| COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 137 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 18/126 (14%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRL 287 + +FD S P L +A+ T I + G+TD N +L Sbjct: 12 SSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKL 68 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDI 336 S RA + L+ G + ++ + G+ D + +RR+++ Sbjct: 69 SQRRAETVANYLVSKGQNPANVTAV-GYGEANPVTGATCDAVKGRKALIACLAPDRRVEV 127 Query: 337 LVEDRQ 342 V+ + Sbjct: 128 QVQGAK 133 >gi|329124105|ref|ZP_08252652.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116] gi|327467530|gb|EGF13028.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116] Length = 348 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 201 INAGISYRFGQGAAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGQMSQV 260 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 + + G+TD N +LS RA S + GV+ D IS +G+ Sbjct: 261 KSAKVVVAGYTDRI---GSDAFNVKLSQKRADSVANYFVAKGVAADAISA-TGYGKANPV 316 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 317 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 348 >gi|237809441|ref|YP_002893881.1| peptidoglycan-associated lipoprotein [Tolumonas auensis DSM 9187] gi|237501702|gb|ACQ94295.1| peptidoglycan-associated lipoprotein [Tolumonas auensis DSM 9187] Length = 171 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 Q N F+ S + +LQ + L V I GHTD N L Sbjct: 65 QDNVIYFNYDSDAIEGQYAQLLQTHADFLRGHNSVKVLIEGHTDER---GTPEYNIALGE 121 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + + + GV ++ + + + ++ NRR ++ Sbjct: 122 RRAKAVAKYMQNLGVDVSQL-SVVSYGEEKPADPGHAEDAFGHNRRAVLV 170 >gi|218507201|ref|ZP_03505079.1| putative outer membrane protein, OmpA family [Rhizobium etli Brasil 5] Length = 208 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 13/185 (7%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 D ++ ++ LPP+ L+ D + LS + + + + Sbjct: 14 EDPDRGYFEDPGADLPPMRLRVPLSDYIVDTRSDPDRDYYEFLSEPPVEPVERVYSLDEV 73 Query: 221 RTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHT 272 + I +T F S+ L+K+ + + +E I GHT Sbjct: 74 KYSARIRDKVRRIDLDTITFATGSAEIPMTQARTLRKVADAISQVLKKDPSETFLIEGHT 133 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSAN 331 DA + N LS RA S VL G+ + + G+ LK+ + N Sbjct: 134 DAV---GSDQSNLVLSDQRAESVANVLSDVYGIPPENM-ATQGYGERYLKVNTAGPEQEN 189 Query: 332 RRIDI 336 RR+ I Sbjct: 190 RRVTI 194 >gi|27366007|ref|NP_761535.1| putative outer membrane protein [Vibrio vulnificus CMCP6] gi|27362207|gb|AAO11062.1| putative outer membrane protein [Vibrio vulnificus CMCP6] Length = 208 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 7/181 (3%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + LQD + L D + + Sbjct: 15 ATPVIASDKADEYDYLATPRADQLADLQDQDRDGVINARDLCPDTPSTAEIDNDGCGTYV 74 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284 + + +F S P ++++ E L I ++G+ + A N Sbjct: 75 KTSQQMQIRVLFANDSDKINPVFRKQIKEMSEFLKLYPSTSIELQGYASRT---GNAEHN 131 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342 LS RA + ++L+ G+++ R+ +I GF L + ++ NRR+ V + Sbjct: 132 LDLSKRRANNVREMLIGYGIAQSRV-RIVGFGDSALANEGTDEVSHALNRRVVASVVGYK 190 Query: 343 G 343 G Sbjct: 191 G 191 >gi|317011033|gb|ADU84780.1| flagellar motor protein MotB [Helicobacter pylori SouthAfrica7] Length = 257 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVLVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ ++ +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSSLLFENATSDTINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VLM+ GV +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLAKTRFKSHYELAANRAYRVMKVLMQYGVDPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVLVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|209695330|ref|YP_002263259.1| sodium-type flagellar protein MotY precursor [Aliivibrio salmonicida LFI1238] gi|208009282|emb|CAQ79548.1| sodium-type flagellar protein MotY precursor [Aliivibrio salmonicida LFI1238] Length = 292 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 9/150 (6%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVL 252 K+I V V + S D T + FDK+S + L Sbjct: 142 QSPKQIVEVGLSPVLFQEQYNVFSMCIANLLPYSFEDISFTILHFDKNSDELNKASKKRL 201 Query: 253 QKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +I + + +++ + +TD+ N ++S RA G+ DRI Sbjct: 202 AQIADFIKYTKDIDLVLVATYTDS---SGAKNVNQQVSERRAVKLQNYFESIGLPADRI- 257 Query: 311 KISGFAHHRLKIASDP--MNSANRRIDILV 338 ++ + R + + NRR+ I + Sbjct: 258 RVHSYGERRPIADNSTPIGKNKNRRVVISL 287 >gi|163786268|ref|ZP_02180716.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteriales bacterium ALC-1] gi|159878128|gb|EDP72184.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteriales bacterium ALC-1] Length = 684 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 10/118 (8%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 + + FD ++ +L ++ + + + + I HTD+ R N Sbjct: 567 LFFELEPIYFDFEMWDIREDSKKILDQLVKKMERYPDIHLKISSHTDSR---GTVRYNQI 623 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRRIDILV 338 LS RA S + G R + GF + +D + NRR + + Sbjct: 624 LSEKRAESTRNYIALIGYINARRLQFKGFGELSPIVECPMLNCTDEEHQLNRRSEFEI 681 >gi|126441843|ref|YP_001058607.1| OmpA family outer membrane protein [Burkholderia pseudomallei 668] gi|126221336|gb|ABN84842.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 668] Length = 236 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 16/116 (13%) Query: 234 TPMFDKSSSI---PLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289 MF + + L ++ + L + +SI G+TD N +LS Sbjct: 118 DAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRL---GSDAYNRQLSQ 174 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDIL 337 RA + L+ +GV D + G + D + NRR++++ Sbjct: 175 ARAKTVGDYLIAAGVPADSVHA-EGRGASDPLVQCDQRERAALIACLAPNRRVEVV 229 >gi|224539344|ref|ZP_03679883.1| hypothetical protein BACCELL_04249 [Bacteroides cellulosilyticus DSM 14838] gi|224519039|gb|EEF88144.1| hypothetical protein BACCELL_04249 [Bacteroides cellulosilyticus DSM 14838] Length = 224 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 9/148 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + V+ V + ++ + +F +SS + L+++ Sbjct: 75 KMDKKAAEAAKIEGAQVEKVTDTNGLAAVKVTF---ESGILFGFNSSTLSNTSKSSLREL 131 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++L I GHTD N ++S DRAY+ L GVS + K+ G Sbjct: 132 AQILKEDPTTDIAIVGHTDKV---GTYEANMKVSKDRAYTVENYLQDCGVSPSQFKKVEG 188 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++ S NRR+DI + + Sbjct: 189 VGYNQ--YDDSMSASQNRRVDIYMYASE 214 >gi|189184227|ref|YP_001938012.1| peptidoglycan-associated lipoprotein [Orientia tsutsugamushi str. Ikeda] gi|189180998|dbj|BAG40778.1| peptidoglycan-associated lipoprotein [Orientia tsutsugamushi str. Ikeda] Length = 204 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 14/145 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S + V + + I ++ F E+ VL+ L Sbjct: 62 DQVTSNNANAQQEEYVDVKHEQFLQAIH---GKHKVYFATEKFDLSEESKRVLRAQSAWL 118 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ + I I GH D N L RA + Q L+ GVS D+I S + Sbjct: 119 KNNPDVKIIIEGHCDER---GTREYNLALGKKRADAVKQFLVTLGVSRDKIETTS-YGKD 174 Query: 319 RL---KIASDPMNS--ANRR-IDIL 337 + + + NRR + I+ Sbjct: 175 KPEVEVTKDNKEEAYRLNRRSVTII 199 >gi|86148066|ref|ZP_01066367.1| putative outer membrane protein [Vibrio sp. MED222] gi|85834126|gb|EAQ52283.1| putative outer membrane protein [Vibrio sp. MED222] Length = 203 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 10/163 (6%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV--KGVLFETTRTGILISIIDQRN-T 234 +E + +++ DL + + + G I + R Sbjct: 22 QQREAYIETPEAEQIADLQDDDKDGVVNARDTCPSTPETSQVDNDGCGETIRAEEVRQLK 81 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F S P + + E L + I I+G+ N LS RA Sbjct: 82 ILFAHDSFEVNPIFSSQISTMAEFLENYKSASIEIQGYASKV---GSNEYNLDLSKKRAN 138 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRI 334 + L+ +G+ +R+ +I G+ RL+ D ++ NR++ Sbjct: 139 NVQDELLSNGIEPERV-RIVGYGEERLENDGDDPTSHALNRKV 180 >gi|320156521|ref|YP_004188900.1| outer membrane protein-like peptidoglycan-associated (lipo)protein [Vibrio vulnificus MO6-24/O] gi|319931833|gb|ADV86697.1| outer membrane protein and related peptidoglycan-associated (lipo)proteins [Vibrio vulnificus MO6-24/O] Length = 208 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 59/182 (32%), Gaps = 9/182 (4%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + LQD + L D + + Sbjct: 15 ATPVIASDKADEYDYLATPRADQLADLQDQDRDGVINARDLCPDTPSTAEIDNDGCGTYV 74 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDN 284 + + +F S P ++++ E L I ++G+ + A N Sbjct: 75 KTSQQMQIRVLFANDSDKINPVFRKQIKEMSEFLKLYPSTSIELQGYASRT---GNAEHN 131 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDR 341 LS RA + ++L+ G+++ R+ +I GF + + NRR+ V Sbjct: 132 LDLSKRRANNVREMLIGYGIAQSRV-RIVGFGDSA-LASEGTDEVSHALNRRVVASVVGY 189 Query: 342 QG 343 +G Sbjct: 190 KG 191 >gi|254458914|ref|ZP_05072337.1| OmpA/MotB [Campylobacterales bacterium GD 1] gi|207084185|gb|EDZ61474.1| OmpA/MotB [Campylobacterales bacterium GD 1] Length = 184 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 62/171 (36%), Gaps = 11/171 (6%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P EK+ + ++ + + S V ++ ++ + ++ + Sbjct: 20 ADKKPAVDEKVKEEVVAQEVEAVKTETVSAEDATVGESSMEKSDSNEMKMA---NLEKEL 76 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLD 290 +T FD + + + V ++ + ++ G+ D N+ L L Sbjct: 77 STVYFDFDKFVIRSDMESKVTNSATVANNTAKAFTVKLEGNCDEW---GSDEYNFALGLK 133 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 RA + + LM GV+E RI+ +S + S NRR+D + Sbjct: 134 RASTVKKALMAEGVNETRITMVS-YGESNPVCNDKTQDCWSKNRRVDFKLL 183 >gi|154508361|ref|ZP_02044003.1| hypothetical protein ACTODO_00858 [Actinomyces odontolyticus ATCC 17982] gi|153797995|gb|EDN80415.1| hypothetical protein ACTODO_00858 [Actinomyces odontolyticus ATCC 17982] Length = 177 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 32/103 (31%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S VL E +S+ GHTD+ N LS RA + Sbjct: 76 FEVDSDQLTARAKEVLDSLASEWTKAKPSTVSVMGHTDSV---ADDAHNLDLSKRRAKAV 132 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 L G G ++ + NRR++I Sbjct: 133 GDYL--KGKVPGLSITTDGKGEAEPIGDNETDEGRAQNRRVEI 173 >gi|167035280|ref|YP_001670511.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1] gi|166861768|gb|ABZ00176.1| OmpA/MotB domain protein [Pseudomonas putida GB-1] Length = 325 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 79/229 (34%), Gaps = 18/229 (7%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 S + K+ ++Q K ++T + K +S ++ Sbjct: 23 SPDGSKEGGSNWWPFGSDKVAEQE--VKAAVTENVAKADAKSESASRWWWPFGGDDKQAK 80 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 KI + L + K+ + + + + T D+ N + Sbjct: 81 GPVVPKIDQKATQAWLDEYEPKLREAIKDSKLELERRDNVLAVTLPVDSSYNPDRPNMLL 140 Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 P T+ + ++ + + + + GH D+ A N +LSL+RA S Sbjct: 141 ---------PMTLGPITRVAKTVEGDPKTAVLVLGHADS---SGAAAANQKLSLERAASV 188 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + SG+ DR+ + G + A+D NRR+++L+ + Sbjct: 189 SAIFRLSGLQRDRL-TLKGMGSVMPRAANDSAEGRSLNRRVEMLLTPQN 236 >gi|320352308|ref|YP_004193647.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320120810|gb|ADW16356.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032] Length = 189 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 7/103 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S+ P P L + + + GHT + N RLS RA Sbjct: 75 LFPLGSTEPEPGQTDQLISGLRHCQVNPITPLVVTGHTCSL---GTEATNLRLSRLRAEQ 131 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 +L G + ++ +SG + NRR+ ++ Sbjct: 132 VATLLRDRGYT---VATVSGKGATDPVSTNPTKRHLNRRVTLV 171 >gi|213620924|ref|ZP_03373707.1| hypothetical protein SentesTyp_26862 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 67 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 3/65 (4%) Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 N LS RA +L GV R+ I G + + NRR++ Sbjct: 4 SAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVH-IVGKGDTVPVADNGSKAGRAKNRRVE 62 Query: 336 ILVED 340 ILV + Sbjct: 63 ILVVE 67 >gi|187924986|ref|YP_001896628.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] gi|187716180|gb|ACD17404.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 215 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 18/119 (15%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD +I P L + + + + G+TD + N RLSL Sbjct: 97 QADALFDFDKAILKPAGKEKLDDLASKIGALNLEVVVATGYTDRI---GSDKYNDRLSLR 153 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILV 338 RA + L+ G+ +RI G N N RR+++ V Sbjct: 154 RAQAVKAYLVSKGIESNRIYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEV 209 >gi|269102192|ref|ZP_06154889.1| sodium-type flagellar protein MotY precursor [Photobacterium damselae subsp. damselae CIP 102761] gi|268162090|gb|EEZ40586.1| sodium-type flagellar protein MotY precursor [Photobacterium damselae subsp. damselae CIP 102761] Length = 297 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 10/133 (7%) Query: 212 VKGVLFETTRTGILISIIDQRNTPM--FDKSSSIPLPETIVVLQKIGEVLA--HSTEVIS 267 F +L D + + +D S + L +I + + +++ Sbjct: 165 KPYQEFNQCLNQLLPYSFDDISFTILHYDNDSEELNELSRKRLMQIADFVRAAKDVDLVL 224 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 + +TD+ +N LS RA ++ + G+ DRI + F R ++ Sbjct: 225 VATYTDSF---GTKNENQDLSERRANKLHEYFISLGLPPDRIK-VQAFGERREIADNNTP 280 Query: 327 -MNSANRRIDILV 338 + NRR+ I + Sbjct: 281 IGRNLNRRVVISL 293 >gi|260769061|ref|ZP_05877995.1| sodium-type flagellar protein MotY precursor [Vibrio furnissii CIP 102972] gi|260617091|gb|EEX42276.1| sodium-type flagellar protein MotY precursor [Vibrio furnissii CIP 102972] Length = 294 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 85/297 (28%), Gaps = 14/297 (4%) Query: 48 FLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107 F+V+ ++ + +Y ++ + E + Sbjct: 9 FVVLSACSSFAASALEK--RYVATPQQSSWQMATNTPLECRLVHPIPNYGEAVFTSHASK 66 Query: 108 KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI 167 K ++D ++ + + + + + + ++ + Sbjct: 67 KINLDFELKMRRPMGETRNVSLVSMPPVWRPGESADRITNIQFFKQFDGYVGGQTAWALL 126 Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 ++ E P S + + ++ + +S+ L + V + IS Sbjct: 127 SELEQGRYPTFSYQDWQSRDQRIEVA-----LSAVLFQPQYNAFSDCVASLLPYSFEDIS 181 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 S + L +I E + ++ ++ + T L Sbjct: 182 FTILHYD---RGDSVELNKASQKRLAQIAEYIRYNPDIDLVLVSTYTDSTDGRNES-QSL 237 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 S RA S + G+ DRI ++ G+ R + NRR+ I + Q Sbjct: 238 SDKRAESLQKYFESLGLPSDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293 >gi|94499552|ref|ZP_01306089.1| hypothetical protein RED65_00925 [Oceanobacter sp. RED65] gi|94428306|gb|EAT13279.1| hypothetical protein RED65_00925 [Oceanobacter sp. RED65] Length = 1644 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 48/148 (32%), Gaps = 9/148 (6%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF---DKSSSIPLPET 248 + + + + +S + ++ + + D +F S P+ Sbjct: 562 AKQVQMVVRTEVSDSEKQKAKEKIIEFKNQHVYVEKKPDGDVYNLFVTFAFDRSQFKPDN 621 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 K S+ +++ GHT + A N LSL RA S + L S +R Sbjct: 622 SFEDFKELFNSLPSSTKLTLIGHTCSI---GTAEYNLGLSLRRAESVRKALGFSDKDSER 678 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRI 334 + + G + NRR+ Sbjct: 679 VF-VEGRGMTDPAYDNSTEAGRQKNRRV 705 >gi|52842260|ref|YP_096059.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54294942|ref|YP_127357.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL) [Legionella pneumophila str. Lens] gi|54297971|ref|YP_124340.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL) [Legionella pneumophila str. Paris] gi|148359617|ref|YP_001250824.1| peptidoglycan-associated lipoprotein [Legionella pneumophila str. Corby] gi|296107659|ref|YP_003619360.1| Peptidoglycan-associated lipoprotein precursor [Legionella pneumophila 2300/99 Alcoy] gi|129597|sp|P26493|PAL_LEGPN RecName: Full=Peptidoglycan-associated lipoprotein; AltName: Full=19 kDa surface antigen; AltName: Full=PPL; Flags: Precursor gi|44129|emb|CAA43033.1| lipoprotein antigen [Legionella pneumophila] gi|52629371|gb|AAU28112.1| peptidoglycan associated lipoprotein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53751756|emb|CAH13178.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL) [Legionella pneumophila str. Paris] gi|53754774|emb|CAH16261.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL) [Legionella pneumophila str. Lens] gi|148281390|gb|ABQ55478.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL) [Legionella pneumophila str. Corby] gi|295649561|gb|ADG25408.1| Peptidoglycan-associated lipoprotein precursor [Legionella pneumophila 2300/99 Alcoy] gi|307610774|emb|CBX00386.1| peptidoglycan-associated lipoprotein precursor [Legionella pneumophila 130b] Length = 176 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S + + + E L + I GHTD N L RA + Sbjct: 71 LFAYDDSTLASKYLPSVNAQAEYLKTHPGARVMIAGHTDER---GSREYNVALGERRADT 127 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342 ++L +GVS +I ++ + R + ++ NRR++ + E + Sbjct: 128 VAEILRMAGVSRQQI-RVVSYGKERPANYGHDEASHAQNRRVEFIYEATR 176 >gi|218690723|ref|YP_002398935.1| putative outer membrane lipoprotein [Escherichia coli ED1a] gi|218428287|emb|CAR09211.2| putative outer membrane lipoprotein [Escherichia coli ED1a] gi|315298676|gb|EFU57930.1| OmpA family protein [Escherichia coli MS 16-3] Length = 160 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITAP 160 >gi|167563920|ref|ZP_02356836.1| outer membrane protein, OmpA family [Burkholderia oklahomensis EO147] gi|167571055|ref|ZP_02363929.1| outer membrane protein, OmpA family [Burkholderia oklahomensis C6786] Length = 170 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + + FD S + +LQ+ + L + I I+G+TD + N L Sbjct: 63 KRSVYFDFDSYSVQDQYQALLQQHAQYLKGHPQRHILIQGNTDER---GTSEYNLALGQK 119 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + + L GV++ ++ +S + + + NRR D++ Sbjct: 120 RAEAVRRALSLLGVTDSQMEAVS-LGKEKPVALGHDEASWAQNRRADLV 167 >gi|317182128|dbj|BAJ59912.1| flagellar motor protein MotB [Helicobacter pylori F57] Length = 255 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDAINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VLM+ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLIKTRFKSHYELAANRAYRVMKVLMQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|30314420|gb|AAP15419.1| outer membrane lipoprotein precursor [Burkholderia multivorans] Length = 149 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E +LQ+ + L + + I+G+TD + N L RA + Sbjct: 47 FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV++ ++ +S + + + + NRR D++ Sbjct: 104 RRALALLGVADSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 146 >gi|83858639|ref|ZP_00952161.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633] gi|83853462|gb|EAP91314.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633] Length = 355 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 39/113 (34%), Gaps = 7/113 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLS 288 D F S + V+ + + +SI GH D A N LS Sbjct: 245 DAGFVVYFAWDRSEISSQAAAVINQAVSQARNCGVASVSIDGHADR---SGAASYNVGLS 301 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339 RA + +++ GV I + F R + NRR +++++ Sbjct: 302 ERRARAVRDEMVRLGVPASAI-SLEAFGESRPAVETPDGVREPLNRRAEVMID 353 >gi|295395658|ref|ZP_06805850.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030] gi|294971474|gb|EFG47357.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030] Length = 607 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 70/251 (27%), Gaps = 33/251 (13%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + T + + N + + + S+D + Sbjct: 159 EPNPQPTGPDEFQRAYSNCTCSNIPKTEEYQGEKPESVPLFYADFPAPSSDSVGIAFGDN 218 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN----IVKGVLFETTRTGILIS 227 + + + K + + + + T + + S Sbjct: 219 AAVFTDVKLSENQRYEAPKLTEIDYRWAHQEDLSNPYGGGAIYERRYPMSLVTESVMDTS 278 Query: 228 IIDQRN--------TPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPF 277 + D+ + +FD S ++ I L S + ++I GHTD Sbjct: 279 VSDRGDSSALNVSADVLFDFDSDKVKDSDSKLIDGIANELKKSAAGQKVTIEGHTDDE-- 336 Query: 278 RNIARDNWRLSLDRAYSAYQVLM----KSGVSEDRISKISGFAHHRLKIASDPMN----- 328 + N LS RA S +VL SG+S + GF + + + Sbjct: 337 -GDEKYNVDLSNRRAESVKKVLEPKVKGSGIS----FETKGFGESQPILPNRTAGGDAIK 391 Query: 329 ---SANRRIDI 336 + NRR+ Sbjct: 392 KNQAKNRRVSF 402 >gi|271499765|ref|YP_003332790.1| peptidoglycan-associated lipoprotein [Dickeya dadantii Ech586] gi|270343320|gb|ACZ76085.1| peptidoglycan-associated lipoprotein [Dickeya dadantii Ech586] Length = 168 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 7/117 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 + + + + N FD P+ +L L + +I GH D Sbjct: 55 LQMQELQRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTIEGHADER---GTPE 111 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 N L RA + L GVS D+I + + + + + S NRR ++ Sbjct: 112 YNIALGERRANAVQMYLQGKGVSADQI-SVVSYGKEKPAVLGHDEAAWSKNRRAVLV 167 >gi|218887301|ref|YP_002436622.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758255|gb|ACL09154.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 311 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 43/235 (18%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 + +L+R + + E L PL ++ +++L + Sbjct: 73 RVTLSRIGSHFGEAGEQALGVTGSVPERIRLLEPLLARPAQVFAHQREIKELLFPGAELP 132 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 G+ + K + G+++++ D +F + +L + EVL + T Sbjct: 133 PGIDRSTLDKNLRILEHPEGVVLALTDDL---LFAPGQWQLREASRPLLGMLAEVLEYVT 189 Query: 264 EVISIRGHTDAS-----------------PFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 ++I GH+D + L+ RA + + ++ + Sbjct: 190 ADVAIAGHSDPRTEGVSALEQAAGAGGGAGVVTGDAIGYELAGRRALTVLEYFVQRKLDP 249 Query: 307 DRISKISGFAHHRLK---------------IASDPMNS-------ANRRIDILVE 339 R ++G+ R + +P + NRR++ILV+ Sbjct: 250 ARF-SVAGYGPDRPSLAGQPPSPGAPGVPEASGEPDAAAGSSDPDRNRRVEILVK 303 >gi|319427914|gb|ADV55988.1| OmpA/MotB domain protein [Shewanella putrefaciens 200] Length = 202 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + +F S+ PE ++ I L +I GHT + N LS Sbjct: 74 KEINILFPNDSAFIAPEYYSQIEDIAAFLRQYPTTKVTIEGHTSRT---GTDERNAVLSQ 130 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 +RA + L + R++ I G+ R + + NRR+ Sbjct: 131 ERADAVTAALADRFNIERSRLTAI-GYGSSRPIVLEQTPEAEMRNRRV 177 >gi|218130801|ref|ZP_03459605.1| hypothetical protein BACEGG_02395 [Bacteroides eggerthii DSM 20697] gi|317474322|ref|ZP_07933598.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA] gi|217987145|gb|EEC53476.1| hypothetical protein BACEGG_02395 [Bacteroides eggerthii DSM 20697] gi|316909632|gb|EFV31310.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA] Length = 225 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 8/147 (5%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 K + V+ + + D + +F +SS + L+ + Sbjct: 75 KMDKKAAEAAKIEGAQVEVVKDANNLDAVKVTFD--SGILFAFNSSTLSNDAKASLRDLA 132 Query: 257 EVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 ++L +T I+I GHTD N ++S +RAY+ L GVS + ++ G Sbjct: 133 KILKEDTTTDIAIIGHTDKV---GTYEANMKVSKNRAYAVENYLQDCGVSPSQFKQVEGV 189 Query: 316 AHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ S NRR+ I + + Sbjct: 190 GYNE--YDESLSASQNRRVVIFMYASE 214 >gi|83719210|ref|YP_441918.1| OmpA family outer membrane protein [Burkholderia thailandensis E264] gi|167580762|ref|ZP_02373636.1| outer membrane protein, OmpA family [Burkholderia thailandensis TXDOH] gi|167618865|ref|ZP_02387496.1| outer membrane protein, OmpA family [Burkholderia thailandensis Bt4] gi|257138089|ref|ZP_05586351.1| OmpA family outer membrane protein [Burkholderia thailandensis E264] gi|83653035|gb|ABC37098.1| outer membrane protein, OmpA family [Burkholderia thailandensis E264] Length = 170 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + + FD S + +LQ+ + L + I I+G+TD + N L Sbjct: 63 KRSVYFDFDSYSVQDQYQPLLQQHAQYLKSHPQRHILIQGNTDER---GTSEYNLALGQK 119 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + + L GV + ++ +S + + + NRR D++ Sbjct: 120 RAEAVRRALSLLGVGDSQMEAVS-LGKEKPVALGHDEASWAQNRRADLV 167 >gi|323137848|ref|ZP_08072923.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242] gi|322396851|gb|EFX99377.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242] Length = 477 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%) Query: 232 RNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 R +F+ S++ +V VL I + HTD I N + Sbjct: 371 RTPIIFETDDSAVAADSAPLVDALTATVLRCRAATIEVAAHTDNF---GIEEINRSRTKR 427 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 RA L+K+G R+S G+ R +D + NRR++ +V Sbjct: 428 RAQVLVDRLIKAGADPSRVSAA-GYGSERPVAPNDSDENRARNRRVEFVVR 477 >gi|254510741|ref|ZP_05122808.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11] gi|221534452|gb|EEE37440.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11] Length = 300 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F L + + LA + ++ GHTD + + N +S RA + Sbjct: 196 FRTGEVALGEGPFASLTLLADYLADNPGTRLALVGHTDDT---GDLQANIAVSTKRAEAV 252 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L++ GV+ DRI G + ++ NRR++ ++ Sbjct: 253 RARLIETYGVAADRIEA-QGVGYLAPITSNATPAGRDINRRVEAVLL 298 >gi|332525605|ref|ZP_08401760.1| peptidoglycan-associated lipoprotein [Rubrivivax benzoatilyticus JA2] gi|332109170|gb|EGJ10093.1| peptidoglycan-associated lipoprotein [Rubrivivax benzoatilyticus JA2] Length = 180 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 7/105 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S + E V+ + L T ++ GHTD N L RA Sbjct: 77 VYFDFDSYVVKDEYKPVIDANAKFLTLDKTVRLTAEGHTDER---GGREYNLALGQKRAE 133 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 + + L G + ++ +S F R + NRR+++ Sbjct: 134 AVVKALQVMGAAAGQVEPVS-FGKERPADPGHDEAAWSKNRRVEL 177 >gi|325520557|gb|EGC99637.1| OmpA/MotB family outer membrane protein [Burkholderia sp. TJI49] Length = 163 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + + FD S P+ +LQ + L + I+G+TD + N L Sbjct: 57 KRSVYFDFDSYSVKPDYQSLLQAHADYLRSHPARHVLIQGNTDER---GTSEYNLALGER 113 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 R+ + L GV ++ +S + + + NRR D++ Sbjct: 114 RSQAVMSALETLGVPASQLEAVS-LGKEKPVALGHDEDSWAQNRRADLV 161 >gi|30314414|gb|AAP15416.1| outer membrane lipoprotein precursor [Burkholderia multivorans ATCC BAA-247] Length = 149 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E +LQ+ + L + + I+G+TD + N L RA + Sbjct: 47 FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV++ ++ +S + + + + NRR D++ Sbjct: 104 RRALALLGVADSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 146 >gi|261880624|ref|ZP_06007051.1| immunogenic lipoprotein PG3 [Prevotella bergensis DSM 17361] gi|270332665|gb|EFA43451.1| immunogenic lipoprotein PG3 [Prevotella bergensis DSM 17361] Length = 222 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 5/147 (3%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 K + + A V T G+ + + +FD + + + L K Sbjct: 68 KHMDKVAAETAAQVKNAKVEEVTDANGLKAVKVTFDSGILFDLNQATLNSSSKKELAKFS 127 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 VL ++ + I G+TD N LS RA S L GVS ++ + G Sbjct: 128 NVLKENSSCHVDIYGYTDR---SGNDAINVPLSQKRAQSVANYLSSCGVSNTQMQNVVGK 184 Query: 316 AHHRLKIASDPMNSANRRIDILVEDRQ 342 + ++ NRR+++ + Q Sbjct: 185 GSQDEI-ENKRVSKVNRRVEVYLYASQ 210 >gi|84687276|ref|ZP_01015156.1| OmpA family protein [Maritimibacter alkaliphilus HTCC2654] gi|84664709|gb|EAQ11193.1| OmpA family protein [Rhodobacterales bacterium HTCC2654] Length = 222 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 4/93 (4%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 +T F+ +S++ + +L + + E + GHTD N +L L Sbjct: 71 PDTVNFEFNSAVLDGQARQILARQASFIRQFPEVHFRVYGHTDKV---GSNAYNRQLGLR 127 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 RA + G+S R+ + + + +A Sbjct: 128 RAQAVVNYFASQGISRSRVEAVVTYGETQPLVA 160 >gi|262396480|ref|YP_003288333.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp. Ex25] gi|262340074|gb|ACY53868.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp. Ex25] Length = 339 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 8/111 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD + + L + ++ I I GHTD + N +S RA Sbjct: 210 SFDFGQKVLSRKQQETLAALNSYVSVDDRVTKILIDGHTDNV---GSSLANLSVSRTRAE 266 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L++ G+ + + + +++ + NRR+ + + Sbjct: 267 QVAEALVELGIDKS-MIETRAHGSRYPIASNNSTKGQAKNRRVTLRLVRDN 316 >gi|213422612|ref|ZP_03355677.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 90 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 15/84 (17%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-- 325 + G TD N LS RA S L+ G+ D+IS G + Sbjct: 1 VLGFTDRI---GSDAYNQGLSEKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCD 56 Query: 326 ---PMNSA------NRRIDILVED 340 P + +RR++I V+ Sbjct: 57 NVKPRAALIDCLAPDRRVEIEVKG 80 >gi|83859799|ref|ZP_00953319.1| Peptidoglycan-associated lipoprotein [Oceanicaulis alexandrii HTCC2633] gi|83852158|gb|EAP90012.1| Peptidoglycan-associated lipoprotein [Oceanicaulis alexandrii HTCC2633] Length = 170 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 33/103 (32%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + F E L++ L+ I I G+ D N L R Sbjct: 60 DRVFFALDQHTLSNEARATLRRQAAWLSSYPGARILIAGNCDER---GTREYNLALGARR 116 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 A +A L+ GV RIS +S + R + NR Sbjct: 117 ANAARDFLVSQGVDPSRISTVS-YGKERPVCNQSTEQCWATNR 158 >gi|254779211|ref|YP_003057316.1| flagellar motor protein MotB [Helicobacter pylori B38] gi|254001122|emb|CAX29077.1| Chemotaxis protein MotB (Motility protein B) [Helicobacter pylori B38] Length = 257 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 82/207 (39%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G S++ + +F+ + S + ++ L++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SVLKLPSNLLFENATSDAINQDMMLYLERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VLM+ GV +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLTKTRFKSHYELAANRAYRVMKVLMQYGVDPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|163854962|ref|YP_001629260.1| peptidoglycan-associated lipoprotein [Bordetella petrii DSM 12804] gi|163258690|emb|CAP40989.1| peptidoglycan-associated lipoprotein [Bordetella petrii] Length = 167 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 7/113 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 S++ Q+ + FD S + +++ LA + I+G+TD A N Sbjct: 55 SVLAQQRSVYFDFDSYTVPDQYRGLVETHARYLASHQQQRVQIQGNTDER---GGAEYNL 111 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 L RA + +++ GVS+ +I IS F + + + NRR DI Sbjct: 112 ALGQRRADAVRRMMTLLGVSDAQIETIS-FGKEKPRATGTTEADFAENRRADI 163 >gi|269963500|ref|ZP_06177826.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269831797|gb|EEZ85930.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 91 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 6/76 (7%) Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + I G++D + N +L+ RA + G++ DR+ + G ++ Sbjct: 8 QVEINGYSDTT---GSEAYNQQLTEKRAQAVADHFQAEGIAADRM-TVKGMGEANPVASN 63 Query: 325 DPMNSA--NRRIDILV 338 + NRR++++V Sbjct: 64 ETREGREENRRVEVVV 79 >gi|237802142|ref|ZP_04590603.1| OmpA domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024999|gb|EGI05055.1| OmpA domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 830 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 33/254 (12%), Positives = 72/254 (28%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+IN + + + + + + T Sbjct: 639 RQTGKTINTNAEPGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 ++ I I + +F + E L I L + + I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + + G + + D Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|254466910|ref|ZP_05080321.1| OmpA/MotB [Rhodobacterales bacterium Y4I] gi|206687818|gb|EDZ48300.1| OmpA/MotB [Rhodobacterales bacterium Y4I] Length = 192 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 10/140 (7%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + V + SI + F + L + + Sbjct: 56 VMDDGAEGFMTPHVTPDGKPVCRRGSICGVMPSDQFFATNKHQINAAGRKRLTEFFQKAQ 115 Query: 261 HSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + GHTD+ N LS RA + QV +G ++ I + Sbjct: 116 SNGARSFVIAGHTDSR---ASDEYNIGLSQRRANAVAQVARSAG---AHVNDIRAYGERE 169 Query: 320 LKIASDPMN--SANRRIDIL 337 ++ + + NRR++I Sbjct: 170 PQVPNTSAANMAKNRRVEIY 189 >gi|205355449|ref|ZP_03222220.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346683|gb|EDZ33315.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 317 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 100/321 (31%), Gaps = 52/321 (16%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+++ + + + Sbjct: 12 W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151 + + ++ +L+ K L N L+ + Q + ++T Sbjct: 45 KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208 + KDL + D + L +E + ++ ++ + I LS + Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQ 164 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258 + + + I + +FDK S + E L+K Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKTSLRKILSEYFDAILEDPK 219 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316 + + E I I GHTD+ N LS RAY + S+ ++ SG + Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276 Query: 317 HHRLKIASDPMN-SANRRIDI 336 + + +RRI+I Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297 >gi|145637084|ref|ZP_01792747.1| Outer membrane protein P5 [Haemophilus influenzae PittHH] gi|145269738|gb|EDK09678.1| Outer membrane protein P5 [Haemophilus influenzae PittHH] Length = 358 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 211 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 270 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS +RA S + GV+ D IS +G+ Sbjct: 271 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 326 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 327 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 358 >gi|312114121|ref|YP_004011717.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] gi|311219250|gb|ADP70618.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 509 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F ++S++ + + + ++ L + G TD + N LSL+RA S Sbjct: 406 FHRNSAVLDDKAMQDVPRLARFLKSDANGKDLLLLGFTDGT---GAFETNKALSLNRATS 462 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L+ GV ++I + G+ + NRR+++ ++D Sbjct: 463 FKNALVAEGVPANKI-TVKGYGSLLPVGCNTSDAGQSANRRVEVWMKD 509 >gi|209517619|ref|ZP_03266457.1| peptidoglycan-associated lipoprotein [Burkholderia sp. H160] gi|209501915|gb|EEA01933.1| peptidoglycan-associated lipoprotein [Burkholderia sp. H160] Length = 168 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + +LQ+ + L + + I+G+TD + N L RA + Sbjct: 66 FDFDSYSVKDDYQTLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 122 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV++ ++ +S + + + NRR D++ Sbjct: 123 RRSLALMGVTDSQMEAVS-LGKEKPLATGHDEASWAQNRRADLV 165 >gi|71738017|ref|YP_272433.1| OmpA domain-containing protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558570|gb|AAZ37781.1| OmpA domain protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 830 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 ++ I I + +F + E L I L + + I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + + G + + D Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVNCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|91227603|ref|ZP_01261907.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 12G01] gi|262394683|ref|YP_003286537.1| OmpA [Vibrio sp. Ex25] gi|269967693|ref|ZP_06181743.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 40B] gi|91188496|gb|EAS74789.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 12G01] gi|262338277|gb|ACY52072.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp. Ex25] gi|269827780|gb|EEZ82064.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 40B] Length = 174 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + +L L+ + ++I GH D N L RA + Sbjct: 74 FAFDNSTIAADYEEMLAAHASYLSKNPALNVTIEGHADER---GTPEYNIALGERRAQAV 130 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L GV D+IS +S + + + + NRR ++ Sbjct: 131 ANYLQALGVQADQISIVS-YGEEKPLLLGQSDEVYAKNRRAVLV 173 >gi|332286925|ref|YP_004418836.1| peptidoglycan-associated lipoprotein [Pusillimonas sp. T7-7] gi|330430878|gb|AEC22212.1| peptidoglycan-associated lipoprotein [Pusillimonas sp. T7-7] Length = 165 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNW 285 S + Q+ + FD S + +++ LA + I G+ DA + N Sbjct: 53 SPLAQQRSVYFDFDSYTVPDQYRSLVEMHASYLASHAQQNILIEGNADAR---GGSEYNL 109 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L R+ + +++ GV+ +I IS F R K + + NRR DI+ Sbjct: 110 ALGQRRSEAVARMMTLLGVNAGQIEAIS-FGKERPKATGNTEADYAENRRADIV 162 >gi|119472858|ref|ZP_01614765.1| putative Component of sodium-driven polar flagellar motor [Alteromonadales bacterium TW-7] gi|119444690|gb|EAW25997.1| putative Component of sodium-driven polar flagellar motor [Alteromonadales bacterium TW-7] Length = 292 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 10/154 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 + Q+ A KI+ +S + + + S D T M + +SS + Sbjct: 141 QDWQNSADKIAVGISSVNFKQ-AYWAFLQCRDELLPYSFEDISFTVMNYQSNSSKLTKSS 199 Query: 249 IVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L KI E L + + E ISI +TD+ +N LS RA + ++ GV E Sbjct: 200 QQRLDKIAEYLKNDSTIESISIDSYTDSY---GGRWNNLDLSRKRAKAIKDYMVSLGVDE 256 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 +++ +GF R +D NRR+ I + Sbjct: 257 NKVKT-TGFGEKRFVDTNDNILGRDKNRRLVIQI 289 >gi|26248968|ref|NP_755008.1| putative outer membrane lipoprotein [Escherichia coli CFT073] gi|91211939|ref|YP_541925.1| putative outer membrane lipoprotein [Escherichia coli UTI89] gi|110642766|ref|YP_670496.1| putative outer membrane lipoprotein [Escherichia coli 536] gi|117624826|ref|YP_853739.1| putative outer membrane lipoprotein [Escherichia coli APEC O1] gi|191174577|ref|ZP_03036072.1| OmpA family protein [Escherichia coli F11] gi|218559525|ref|YP_002392438.1| outer membrane lipoprotein [Escherichia coli S88] gi|227888171|ref|ZP_04005976.1| OmpA family protein [Escherichia coli 83972] gi|237706807|ref|ZP_04537288.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|300986825|ref|ZP_07177814.1| OmpA family protein [Escherichia coli MS 45-1] gi|300990725|ref|ZP_07179310.1| OmpA family protein [Escherichia coli MS 200-1] gi|301050475|ref|ZP_07197354.1| OmpA family protein [Escherichia coli MS 185-1] gi|306812477|ref|ZP_07446675.1| putative outer membrane lipoprotein [Escherichia coli NC101] gi|331658753|ref|ZP_08359695.1| YfiB [Escherichia coli TA206] gi|26109374|gb|AAN81576.1|AE016764_258 Putative lipoprotein yfiB precursor [Escherichia coli CFT073] gi|91073513|gb|ABE08394.1| putative lipoprotein YfiB precursor [Escherichia coli UTI89] gi|110344358|gb|ABG70595.1| putative lipoprotein YfiB precursor [Escherichia coli 536] gi|115513950|gb|ABJ02025.1| putative outer membrane lipoprotein [Escherichia coli APEC O1] gi|190905150|gb|EDV64794.1| OmpA family protein [Escherichia coli F11] gi|218366294|emb|CAR04045.2| putative outer membrane lipoprotein [Escherichia coli S88] gi|222034307|emb|CAP77048.1| lipoprotein yfiB [Escherichia coli LF82] gi|226899847|gb|EEH86106.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227834811|gb|EEJ45277.1| OmpA family protein [Escherichia coli 83972] gi|281179651|dbj|BAI55981.1| conserved hypothetical protein [Escherichia coli SE15] gi|294492477|gb|ADE91233.1| lipoprotein, OmpA family [Escherichia coli IHE3034] gi|300297822|gb|EFJ54207.1| OmpA family protein [Escherichia coli MS 185-1] gi|300305693|gb|EFJ60213.1| OmpA family protein [Escherichia coli MS 200-1] gi|300407877|gb|EFJ91415.1| OmpA family protein [Escherichia coli MS 45-1] gi|305854515|gb|EFM54953.1| putative outer membrane lipoprotein [Escherichia coli NC101] gi|307554618|gb|ADN47393.1| putative lipoprotein YfiB precursor [Escherichia coli ABU 83972] gi|307625845|gb|ADN70149.1| putative outer membrane lipoprotein [Escherichia coli UM146] gi|312947177|gb|ADR28004.1| putative outer membrane lipoprotein [Escherichia coli O83:H1 str. NRG 857C] gi|315284819|gb|EFU44264.1| OmpA family protein [Escherichia coli MS 110-3] gi|315290954|gb|EFU50319.1| OmpA family protein [Escherichia coli MS 153-1] gi|323951196|gb|EGB47072.1| OmpA family protein [Escherichia coli H252] gi|323957028|gb|EGB52754.1| OmpA family protein [Escherichia coli H263] gi|324005821|gb|EGB75040.1| OmpA family protein [Escherichia coli MS 57-2] gi|324012443|gb|EGB81662.1| OmpA family protein [Escherichia coli MS 60-1] gi|331053335|gb|EGI25364.1| YfiB [Escherichia coli TA206] Length = 160 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|87201146|ref|YP_498403.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444] gi|87136827|gb|ABD27569.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444] Length = 357 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 35/109 (32%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 FD S PE +L + I + G+ D + N LS Sbjct: 246 PYIVFFDWDKSDITPEAATILDNAITAYGNCASVPIMLAGYADR---SGTVKYNQGLSER 302 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 R S L GV + I+ F ++ + NRR++I Sbjct: 303 RNASVRSYLTTHGVPDGSITS-QAFGESNPRVPTADGVRELQNRRVEIT 350 >gi|84393843|ref|ZP_00992588.1| putative outer membrane protein [Vibrio splendidus 12B01] gi|84375538|gb|EAP92440.1| putative outer membrane protein [Vibrio splendidus 12B01] Length = 203 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 10/165 (6%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD--NIVKGVLFETTRTGILISIIDQRN 233 +E + +++ DL + + + + G I + R Sbjct: 20 SSQQEEAYIETPEAEQIADLQDDDNDGVVNARDTCPGTPEASQVDNDGCGETIRAEEVRQ 79 Query: 234 -TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F S P + + E L I I+G+ N LS R Sbjct: 80 LKILFAHDSFEVNPIFSDQISTMAEFLETYKSASIEIQGYASKV---GSNEYNLDLSKRR 136 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRI 334 A + L+ +G+ +R+ +I G+ RL+ D ++ NR++ Sbjct: 137 ANNVQDELLSNGIEPERV-RIVGYGEERLENEGDDATSHALNRKV 180 >gi|332967831|gb|EGK06930.1| OmpA family protein [Kingella kingae ATCC 23330] Length = 227 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 5/88 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F PE + L ++ + + + + + GHTD F + N LS R Sbjct: 90 SNFLFGFDKDKLRPEAVETLNQLVARVNGTNVQAVRVEGHTD---FMGAEQYNQALSERR 146 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHR 319 A + L+ GV +R+S + G + Sbjct: 147 ATAVANYLVSQGVPAERVSAV-GLGESQ 173 >gi|328473741|gb|EGF44576.1| hypothetical protein VP10329_13800 [Vibrio parahaemolyticus 10329] Length = 300 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 7/158 (4%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +++RL L +++ L+ + F S+ P+ Sbjct: 118 QRRRLNQLEQQLDYVLTQTTCTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPK 177 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + L + +L + + GH D N +L+ +RA + L GV+ Sbjct: 178 YMGHLAEAAYILRDHPALSLVVTGHAD---VTGTPEHNKKLAQERAEQVKRYLSVFGVAS 234 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 DR+ NRR+ I V Sbjct: 235 DRVQT-KSVGDTLPLYEGQTPAVRLTNRRVSIEVLSAN 271 >gi|254506184|ref|ZP_05118328.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus 16] gi|219551002|gb|EED27983.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus 16] Length = 175 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++ + +L L+ + +++ GH D N L RA + Sbjct: 75 FAFDNATIAGDYEEMLAAHAAYLSKNPALKVTVEGHADER---GTPEYNIALGERRATAV 131 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + L GV D+IS +S + + + + + NRR ++ Sbjct: 132 AKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 174 >gi|221210024|ref|ZP_03583005.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans CGD1] gi|221170712|gb|EEE03178.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans CGD1] Length = 163 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + + FD S PE +LQ L + I+G+TD + N L Sbjct: 57 KRSVYFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDER---GTSEYNLALGQR 113 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 R+ + L GVS ++ +S + + + NRR D++ Sbjct: 114 RSQAVMSALETLGVSASQLEAVS-LGKEKPVALGHDEAAWAQNRRADLV 161 >gi|149185364|ref|ZP_01863681.1| outer membrane protein [Erythrobacter sp. SD-21] gi|148831475|gb|EDL49909.1| outer membrane protein [Erythrobacter sp. SD-21] Length = 218 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 13/116 (11%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 F L I + + RGH+D+ DN S +RA + Sbjct: 70 SFADGMPELTEAVRAELATIVDSPQMEAGGAIVLRGHSDSD---GSDEDNLEASRERAEA 126 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--------ASDPMNSANRRIDILVEDRQ 342 +++G+ E RI + F ++ + NRR+++ +E + Sbjct: 127 VRDFFVENGIDEARI-TVIAFGEQNPLAPNALPDGSPNEEGRATNRRVEVTIETGR 181 >gi|585614|sp|P38368|OMP52_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; Flags: Precursor gi|388301|gb|AAA03346.1| outer membrane protein P5 [Haemophilus influenzae] gi|301169904|emb|CBW29508.1| outer membrane protein A (3a;II*;G;d) [Haemophilus influenzae 10810] Length = 353 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 206 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 265 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS +RA S + GV+ D IS +G+ Sbjct: 266 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 321 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 322 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 353 >gi|330892287|gb|EGH24948.1| OmpA domain-containing protein [Pseudomonas syringae pv. mori str. 301020] Length = 830 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 ++ I I + +F + E L I L + + I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + + G + + D Sbjct: 759 ---GDPQSNMQVSRQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|73853300|ref|YP_308796.1| OmpA-family lipoprotein [Escherichia coli] gi|73476884|gb|AAZ76499.1| OmpA-family lipoprotein [Escherichia coli] Length = 267 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 37/113 (32%), Gaps = 13/113 (11%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 +F+ S + L++I + + + I G TD N LS RA Sbjct: 155 GDVLFNFDSWRLTDKANDELERIATKFSQVDD-VRIEGFTDPL---GSKEYNRILSEKRA 210 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA------NRRIDIL 337 S + + G +RI +G + NRR++I Sbjct: 211 ESVKEWFISRGFKAERIQA-TGRGADAPVALCPGMVGDGLKECLRPNRRVEIT 262 >gi|330874387|gb|EGH08536.1| OmpA domain-containing protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 830 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 ++ I I + +F + E L I L + + I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKVEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + + G + + D Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPSELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|261342034|ref|ZP_05969892.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316] gi|288315690|gb|EFC54628.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316] Length = 161 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 6/109 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +FDK+ + PE+ ++ + LA + + GHTD N LSL R Sbjct: 53 DKILFDKNDARLRPESETQIRTMASRLAATGLNHARMDGHTDNY---GEESYNEALSLKR 109 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A + K G ++ + NRR+ +++ Sbjct: 110 ANAVADAWAKGANIPRGNLTTQGLGKKYPVASNSTPQGRAENRRVAVVI 158 >gi|254507991|ref|ZP_05120119.1| outer membrane protein [Vibrio parahaemolyticus 16] gi|219549099|gb|EED26096.1| outer membrane protein [Vibrio parahaemolyticus 16] Length = 278 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 13/198 (6%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 +G C + ++I K+ + A + ++ L V Sbjct: 72 EGARWCFPAAVVQAIEKQNRIARELEGGLLLDAANDIVIQRKRLNELELQL-DYVTSQTK 130 Query: 213 KGVLFETTRTGILISIIDQRNTPM-----FDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266 + +++ID+ + F +SS P+ + L K +LA + Sbjct: 131 CVPPMDEGAFHQRLAVIDELFNLLNVDNQFAFNSSEVNPKYMGHLAKAANMLAEHPSLNL 190 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + GH D+ N +L+L+RA + L G++ RI + Sbjct: 191 KVTGHADSV---GDVAYNEKLALERAQQVKRYLSIFGLAPTRI-ATHSVGDTLPLHEGNS 246 Query: 327 MNSA--NRRIDILVEDRQ 342 NRR+ I V D Q Sbjct: 247 EGVKLTNRRVSIEVIDTQ 264 >gi|15803127|ref|NP_289158.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 EDL933] gi|15832722|ref|NP_311495.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. Sakai] gi|168752055|ref|ZP_02777077.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113] gi|168762397|ref|ZP_02787404.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501] gi|168773468|ref|ZP_02798475.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196] gi|168778583|ref|ZP_02803590.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076] gi|195940199|ref|ZP_03085581.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str. EC4024] gi|208807469|ref|ZP_03249806.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206] gi|208813697|ref|ZP_03255026.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045] gi|208820246|ref|ZP_03260566.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042] gi|209399323|ref|YP_002272076.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115] gi|217327416|ref|ZP_03443499.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588] gi|254794551|ref|YP_003079388.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str. TW14359] gi|12517027|gb|AAG57716.1|AE005490_11 putative outer membrane protein [Escherichia coli O157:H7 str. EDL933] gi|13362939|dbj|BAB36891.1| putative outer membrane protein [Escherichia coli O157:H7 str. Sakai] gi|187770670|gb|EDU34514.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196] gi|188014012|gb|EDU52134.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113] gi|189003592|gb|EDU72578.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076] gi|189367264|gb|EDU85680.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501] gi|208727270|gb|EDZ76871.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206] gi|208734974|gb|EDZ83661.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045] gi|208740369|gb|EDZ88051.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042] gi|209160723|gb|ACI38156.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115] gi|209762580|gb|ACI79602.1| putative outer membrane protein [Escherichia coli] gi|209762582|gb|ACI79603.1| putative outer membrane protein [Escherichia coli] gi|209762586|gb|ACI79605.1| putative outer membrane protein [Escherichia coli] gi|217319783|gb|EEC28208.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588] gi|254593951|gb|ACT73312.1| predicted outer membrane lipoprotein [Escherichia coli O157:H7 str. TW14359] gi|320188940|gb|EFW63599.1| Integral membrane protein YfiB [Escherichia coli O157:H7 str. EC1212] gi|326344357|gb|EGD68115.1| Integral membrane protein YfiB [Escherichia coli O157:H7 str. 1125] gi|326347726|gb|EGD71443.1| Integral membrane protein YfiB [Escherichia coli O157:H7 str. 1044] Length = 160 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITPP 160 >gi|309244377|gb|ADO52193.1| OprL [Pseudomonas cichorii] Length = 156 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 4/89 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 66 FEYDSSDLKPEALRSLDVHAKDLKANGARVVLEGNTDER---GTREYNIALGERRAKAVQ 122 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325 + L+ GVS ++ +S + R + Sbjct: 123 RYLVLQGVSPAQLELVS-YGEERPVATGN 150 >gi|301155739|emb|CBW15207.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus parainfluenzae T3T1] Length = 156 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 + + NT F E + +L L + + + G+TD N Sbjct: 47 LQQRYNTVYFGFDKFNIEGEYVQILDAHAAYLNATPASKVVVEGNTDER---GTPEYNIA 103 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333 L RA + L GV ++S +S + + + + NRR Sbjct: 104 LGQRRADAVKGFLAGKGVDAGKVSTVS-YGEEKPAVLGHDEAAYSKNRR 151 >gi|153947861|ref|YP_001401507.1| outer membrane protein A [Yersinia pseudotuberculosis IP 31758] gi|152959356|gb|ABS46817.1| outer membrane protein A [Yersinia pseudotuberculosis IP 31758] Length = 357 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L+ + + G D N LS Sbjct: 229 KSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 285 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+I+ G + P + +RR++I Sbjct: 286 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 344 Query: 338 VED 340 V+ Sbjct: 345 VKG 347 >gi|319776591|ref|YP_004139079.1| outer membrane protein p5 precursor (omp p5) [Haemophilus influenzae F3047] gi|317451182|emb|CBY87415.1| outer membrane protein p5 precursor (omp p5) [Haemophilus influenzae F3047] Length = 348 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 201 INAGISYRFGQGAAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGQMSQV 260 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS RA S + GV+ D IS +G+ Sbjct: 261 KSAKVAVAGYTDRI---GSDEFNVKLSQKRADSVANYFVAKGVAADAISA-TGYGKANPV 316 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 317 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 348 >gi|319897366|ref|YP_004135562.1| outer membrane protein p5 precursor (omp p5) [Haemophilus influenzae F3031] gi|317432871|emb|CBY81237.1| outer membrane protein p5 precursor (omp p5) [Haemophilus influenzae F3031] Length = 348 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 201 INAGISYRFGQGAAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGQMSQV 260 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS RA S + GV+ D IS +G+ Sbjct: 261 KSAKVAVAGYTDRI---GSDEFNVKLSQKRADSVANYFVAKGVAADAISA-TGYGKANPV 316 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 317 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 348 >gi|215487943|ref|YP_002330374.1| putative outer membrane lipoprotein [Escherichia coli O127:H6 str. E2348/69] gi|215266015|emb|CAS10427.1| predicted outer membrane lipoprotein [Escherichia coli O127:H6 str. E2348/69] Length = 160 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASIGLTHARMDGHTDNY---GEDSYNEVLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|16130526|ref|NP_417096.1| probable positive effector of YfiN activity, OM lipoprotein [Escherichia coli str. K-12 substr. MG1655] gi|89109406|ref|AP_003186.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12 substr. W3110] gi|170082209|ref|YP_001731529.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr. DH10B] gi|238901765|ref|YP_002927561.1| putative outer membrane lipoprotein [Escherichia coli BW2952] gi|254037681|ref|ZP_04871739.1| outer membrane lipoprotein [Escherichia sp. 1_1_43] gi|256024868|ref|ZP_05438733.1| putative outer membrane lipoprotein [Escherichia sp. 4_1_40B] gi|300949000|ref|ZP_07163053.1| OmpA family protein [Escherichia coli MS 116-1] gi|300957389|ref|ZP_07169603.1| OmpA family protein [Escherichia coli MS 175-1] gi|301644047|ref|ZP_07244063.1| OmpA family protein [Escherichia coli MS 146-1] gi|307139326|ref|ZP_07498682.1| putative outer membrane lipoprotein [Escherichia coli H736] gi|331643321|ref|ZP_08344452.1| YfiB [Escherichia coli H736] gi|140651|sp|P07021|YFIB_ECOLI RecName: Full=Putative lipoprotein yfiB; Flags: Precursor gi|1788957|gb|AAC75654.1| probable positive effector of YfiN activity, OM lipoprotein [Escherichia coli str. K-12 substr. MG1655] gi|1800010|dbj|BAA16490.1| predicted outer membrane lipoprotein [Escherichia coli str. K12 substr. W3110] gi|169890044|gb|ACB03751.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12 substr. DH10B] gi|226839305|gb|EEH71326.1| outer membrane lipoprotein [Escherichia sp. 1_1_43] gi|238862713|gb|ACR64711.1| predicted outer membrane lipoprotein [Escherichia coli BW2952] gi|260448321|gb|ACX38743.1| OmpA/MotB domain protein [Escherichia coli DH1] gi|300315824|gb|EFJ65608.1| OmpA family protein [Escherichia coli MS 175-1] gi|300451527|gb|EFK15147.1| OmpA family protein [Escherichia coli MS 116-1] gi|301077592|gb|EFK92398.1| OmpA family protein [Escherichia coli MS 146-1] gi|309702985|emb|CBJ02316.1| outer membrane lipoprotein [Escherichia coli ETEC H10407] gi|315137223|dbj|BAJ44382.1| putative outer membrane lipoprotein [Escherichia coli DH1] gi|331036792|gb|EGI09016.1| YfiB [Escherichia coli H736] Length = 160 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|298484732|ref|ZP_07002834.1| OmpA domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160765|gb|EFI01784.1| OmpA domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 830 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 ++ I I + +F + E L I L + + I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + + G + + D Sbjct: 759 ---GDPQSNMQVSRQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|24113943|ref|NP_708453.1| putative outer membrane lipoprotein [Shigella flexneri 2a str. 301] gi|30064004|ref|NP_838175.1| putative outer membrane lipoprotein [Shigella flexneri 2a str. 2457T] gi|74313195|ref|YP_311614.1| putative outer membrane lipoprotein [Shigella sonnei Ss046] gi|82545149|ref|YP_409096.1| outer membrane lipoprotein [Shigella boydii Sb227] gi|218706106|ref|YP_002413625.1| putative outer membrane lipoprotein [Escherichia coli UMN026] gi|293406112|ref|ZP_06650038.1| outer membrane lipoprotein [Escherichia coli FVEC1412] gi|293411994|ref|ZP_06654717.1| outer membrane lipoprotein [Escherichia coli B354] gi|298381845|ref|ZP_06991442.1| outer membrane lipoprotein [Escherichia coli FVEC1302] gi|300900209|ref|ZP_07118397.1| OmpA family protein [Escherichia coli MS 198-1] gi|331684261|ref|ZP_08384853.1| YfiB [Escherichia coli H299] gi|24053050|gb|AAN44160.1| putative outer membrane protein [Shigella flexneri 2a str. 301] gi|30042260|gb|AAP17985.1| putative outer membrane protein [Shigella flexneri 2a str. 2457T] gi|73856672|gb|AAZ89379.1| putative outer membrane protein [Shigella sonnei Ss046] gi|81246560|gb|ABB67268.1| putative outer membrane protein [Shigella boydii Sb227] gi|218433203|emb|CAR14101.1| putative outer membrane lipoprotein [Escherichia coli UMN026] gi|291426118|gb|EFE99150.1| outer membrane lipoprotein [Escherichia coli FVEC1412] gi|291468765|gb|EFF11256.1| outer membrane lipoprotein [Escherichia coli B354] gi|298276985|gb|EFI18501.1| outer membrane lipoprotein [Escherichia coli FVEC1302] gi|300356266|gb|EFJ72136.1| OmpA family protein [Escherichia coli MS 198-1] gi|313648283|gb|EFS12727.1| ompA family protein [Shigella flexneri 2a str. 2457T] gi|331077876|gb|EGI49082.1| YfiB [Escherichia coli H299] gi|333000977|gb|EGK20547.1| ompA family protein [Shigella flexneri K-272] Length = 160 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|296410010|gb|ADH15781.1| OmpP6 [Haemophilus haemolyticus] Length = 149 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 + + NT F E + +L L + + + G+TD N Sbjct: 41 LQQRYNTVYFGFDKYNIEGEYVQILDAHAAYLNATPAAKVLVEGNTDER---GTPEYNIA 97 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333 L RA + L GV ++ +S + + + + NRR Sbjct: 98 LGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 145 >gi|197106106|ref|YP_002131483.1| OmpA family protein [Phenylobacterium zucineum HLK1] gi|196479526|gb|ACG79054.1| OmpA family protein [Phenylobacterium zucineum HLK1] Length = 178 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 35/103 (33%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F S + E VLQ L + I G+ D N L R Sbjct: 68 ERVYFALDSDLLDAEARSVLQLQAAWLQRNPTVRARIEGNADER---GTREYNLALGARR 124 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANR 332 A +A Q L++SGV R+ IS + R + NR Sbjct: 125 AQAARQFLIRSGVDSTRLETIS-YGKERPIDPGSTEEAWARNR 166 >gi|323495160|ref|ZP_08100245.1| peptidoglycan-associated lipoprotein [Vibrio brasiliensis LMG 20546] gi|323310600|gb|EGA63779.1| peptidoglycan-associated lipoprotein [Vibrio brasiliensis LMG 20546] Length = 175 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + +L L+ + ++I GH D N L RA + Sbjct: 75 FAFDNSTIAGDYEEMLAAHAAYLSKNPALNVTIEGHADER---GTPEYNIALGERRATAV 131 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + L GV D+IS +S + + + + + NRR ++ Sbjct: 132 AKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 174 >gi|305431690|ref|ZP_07400859.1| chemotaxis protein MotB [Campylobacter coli JV20] gi|304445285|gb|EFM37929.1| chemotaxis protein MotB [Campylobacter coli JV20] Length = 316 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 98/330 (29%), Gaps = 52/330 (15%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83 + W I YAD M L+ F+++ + + Sbjct: 2 KNEQEEGNFW-IAYADLMAGLLFVFILLI--------------------------GAIVV 34 Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS-QQSEH 142 + + + ++ +L+ K L N L+ Q Sbjct: 35 KYVLTQSDLREIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLINSQKAE 94 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---I 199 + ++T + K+L S D + L +E + + ++ + I Sbjct: 95 LEANITNYEQLSKELNSSIDNKDKQILILLGQLEKKDEEIRNLQESFDKAKEKVQNLSLI 154 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ------ 253 LS + + + + I + + +FDK S E L+ Sbjct: 155 RENLSKELQAKLDSNITIDQKTGSISL-----PSEVLFDKDSYTLKNEAKASLRKILSEY 209 Query: 254 ----KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK--SGVSED 307 + + E I I GHTD+ N LS RAY + + Sbjct: 210 FNAIINDPKILSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKDIRLQ 266 Query: 308 RISKISGFAHHRLKIASDPMN-SANRRIDI 336 ++ SG + + + + +RRI+I Sbjct: 267 KLLMASGRSFSDPVLVNGVEDKDKSRRIEI 296 >gi|157158147|ref|YP_001463924.1| putative outer membrane lipoprotein [Escherichia coli E24377A] gi|157162081|ref|YP_001459399.1| putative outer membrane lipoprotein [Escherichia coli HS] gi|170019118|ref|YP_001724072.1| putative outer membrane lipoprotein [Escherichia coli ATCC 8739] gi|188495277|ref|ZP_03002547.1| OmpA family protein [Escherichia coli 53638] gi|194430167|ref|ZP_03062668.1| OmpA family protein [Escherichia coli B171] gi|209920080|ref|YP_002294164.1| putative outer membrane lipoprotein [Escherichia coli SE11] gi|218555184|ref|YP_002388097.1| putative outer membrane lipoprotein [Escherichia coli IAI1] gi|218696229|ref|YP_002403896.1| putative outer membrane lipoprotein [Escherichia coli 55989] gi|253772501|ref|YP_003035332.1| outer membrane lipoprotein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162575|ref|YP_003045683.1| putative outer membrane lipoprotein [Escherichia coli B str. REL606] gi|260845286|ref|YP_003223064.1| putative outer membrane lipoprotein [Escherichia coli O103:H2 str. 12009] gi|260856694|ref|YP_003230585.1| putative outer membrane lipoprotein [Escherichia coli O26:H11 str. 11368] gi|261227488|ref|ZP_05941769.1| predicted outer membrane lipoprotein [Escherichia coli O157:H7 str. FRIK2000] gi|261255682|ref|ZP_05948215.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str. FRIK966] gi|291283877|ref|YP_003500695.1| OmpA family protein [Escherichia coli O55:H7 str. CB9615] gi|293415876|ref|ZP_06658516.1| lipoprotein yfiB [Escherichia coli B185] gi|293448955|ref|ZP_06663376.1| lipoprotein yfiB [Escherichia coli B088] gi|297517107|ref|ZP_06935493.1| putative outer membrane lipoprotein [Escherichia coli OP50] gi|300819922|ref|ZP_07100105.1| OmpA family protein [Escherichia coli MS 107-1] gi|300825119|ref|ZP_07105212.1| OmpA family protein [Escherichia coli MS 119-7] gi|300905075|ref|ZP_07122884.1| OmpA family protein [Escherichia coli MS 84-1] gi|300921149|ref|ZP_07137528.1| OmpA family protein [Escherichia coli MS 115-1] gi|300925597|ref|ZP_07141467.1| OmpA family protein [Escherichia coli MS 182-1] gi|300930670|ref|ZP_07146056.1| OmpA family protein [Escherichia coli MS 187-1] gi|301305750|ref|ZP_07211837.1| OmpA family protein [Escherichia coli MS 124-1] gi|301326724|ref|ZP_07220038.1| OmpA family protein [Escherichia coli MS 78-1] gi|307315083|ref|ZP_07594667.1| OmpA/MotB domain protein [Escherichia coli W] gi|309794116|ref|ZP_07688540.1| OmpA family protein [Escherichia coli MS 145-7] gi|331654062|ref|ZP_08355062.1| YfiB [Escherichia coli M718] gi|331669355|ref|ZP_08370201.1| YfiB [Escherichia coli TA271] gi|331678596|ref|ZP_08379270.1| YfiB [Escherichia coli H591] gi|157067761|gb|ABV07016.1| OmpA family protein [Escherichia coli HS] gi|157080177|gb|ABV19885.1| OmpA family protein [Escherichia coli E24377A] gi|169754046|gb|ACA76745.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739] gi|188490476|gb|EDU65579.1| OmpA family protein [Escherichia coli 53638] gi|194411792|gb|EDX28113.1| OmpA family protein [Escherichia coli B171] gi|209762578|gb|ACI79601.1| putative outer membrane protein [Escherichia coli] gi|209762584|gb|ACI79604.1| putative outer membrane protein [Escherichia coli] gi|209913339|dbj|BAG78413.1| conserved hypothetical protein [Escherichia coli SE11] gi|218352961|emb|CAU98761.1| putative outer membrane lipoprotein [Escherichia coli 55989] gi|218361952|emb|CAQ99553.1| putative outer membrane lipoprotein [Escherichia coli IAI1] gi|242378200|emb|CAQ32975.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)] gi|253323545|gb|ACT28147.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974476|gb|ACT40147.1| predicted outer membrane lipoprotein [Escherichia coli B str. REL606] gi|253978643|gb|ACT44313.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)] gi|257755343|dbj|BAI26845.1| predicted outer membrane lipoprotein [Escherichia coli O26:H11 str. 11368] gi|257760433|dbj|BAI31930.1| predicted outer membrane lipoprotein [Escherichia coli O103:H2 str. 12009] gi|290763750|gb|ADD57711.1| OmpA family protein [Escherichia coli O55:H7 str. CB9615] gi|291322045|gb|EFE61474.1| lipoprotein yfiB [Escherichia coli B088] gi|291432065|gb|EFF05047.1| lipoprotein yfiB [Escherichia coli B185] gi|300403026|gb|EFJ86564.1| OmpA family protein [Escherichia coli MS 84-1] gi|300411899|gb|EFJ95209.1| OmpA family protein [Escherichia coli MS 115-1] gi|300418292|gb|EFK01603.1| OmpA family protein [Escherichia coli MS 182-1] gi|300461467|gb|EFK24960.1| OmpA family protein [Escherichia coli MS 187-1] gi|300522391|gb|EFK43460.1| OmpA family protein [Escherichia coli MS 119-7] gi|300527510|gb|EFK48572.1| OmpA family protein [Escherichia coli MS 107-1] gi|300839004|gb|EFK66764.1| OmpA family protein [Escherichia coli MS 124-1] gi|300846584|gb|EFK74344.1| OmpA family protein [Escherichia coli MS 78-1] gi|306905512|gb|EFN36046.1| OmpA/MotB domain protein [Escherichia coli W] gi|308122021|gb|EFO59283.1| OmpA family protein [Escherichia coli MS 145-7] gi|315061919|gb|ADT76246.1| predicted outer membrane lipoprotein [Escherichia coli W] gi|320198378|gb|EFW72980.1| Integral membrane protein YfiB [Escherichia coli EC4100B] gi|320640787|gb|EFX10285.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str. G5101] gi|320646132|gb|EFX15077.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str. 493-89] gi|320651429|gb|EFX19830.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str. H 2687] gi|320657034|gb|EFX24857.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662698|gb|EFX30042.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str. USDA 5905] gi|320667515|gb|EFX34439.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str. LSU-61] gi|323156259|gb|EFZ42418.1| ompA family protein [Escherichia coli EPECa14] gi|323173078|gb|EFZ58709.1| ompA family protein [Escherichia coli LT-68] gi|323377501|gb|ADX49769.1| OmpA/MotB domain protein [Escherichia coli KO11] gi|323960537|gb|EGB56166.1| OmpA family protein [Escherichia coli H489] gi|323971452|gb|EGB66688.1| OmpA family protein [Escherichia coli TA007] gi|324016591|gb|EGB85810.1| OmpA family protein [Escherichia coli MS 117-3] gi|324120062|gb|EGC13938.1| OmpA family protein [Escherichia coli E1167] gi|331047444|gb|EGI19521.1| YfiB [Escherichia coli M718] gi|331063023|gb|EGI34936.1| YfiB [Escherichia coli TA271] gi|331073426|gb|EGI44747.1| YfiB [Escherichia coli H591] Length = 160 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|22126613|ref|NP_670036.1| outer membrane protein A [Yersinia pestis KIM 10] gi|45441153|ref|NP_992692.1| outer membrane protein A [Yersinia pestis biovar Microtus str. 91001] gi|21959622|gb|AAM86287.1|AE013876_5 outer membrane porin A [Yersinia pestis KIM 10] gi|45436013|gb|AAS61569.1| putative outer membrane porin A protein [Yersinia pestis biovar Microtus str. 91001] Length = 363 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L+ + + G D N LS Sbjct: 235 KSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 291 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+I+ G + P + +RR++I Sbjct: 292 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 350 Query: 338 VED 340 V+ Sbjct: 351 VKG 353 >gi|332827935|gb|EGK00657.1| hypothetical protein HMPREF9455_02931 [Dysgonomonas gadei ATCC BAA-286] Length = 661 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 34/138 (24%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +D + PE+ L + ++L + I + HTD + N RLS R Sbjct: 522 ENIFYDFDKATLRPESKEELDGLIDLLNLNPNVTIELSAHTDR---KGSDEYNNRLSQRR 578 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------------------------- 324 A S L+ G+++DR++ + G + K + Sbjct: 579 AESVVNYLITHGIAKDRLTAV-GKGKAQPKNVTKAVVKKYDFLKEGEVLTEQFIQELPPE 637 Query: 325 --DPMNSANRRIDILVED 340 D + NRR + V Sbjct: 638 QQDMADQVNRRTEFRVLS 655 >gi|255034413|ref|YP_003085034.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254947169|gb|ACT91869.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 248 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 71/232 (30%), Gaps = 7/232 (3%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 S ++ S QR +I L + + G+ + + + Sbjct: 19 SQPVQANSKAAGSLRQRSRVSIRVLDKFSLRPVRATIMLVGNHPGRQVAPRFENGIYQFR 78 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 +S + + + +N + I + Sbjct: 79 MSAGDTSVISIHASGYEMLSEAVAGRDLHATKIFYLTPIENSTERAREPVIEQNIPVLED 138 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D R T F +S S LPE+ L+ + L + I + GHTD N LS Sbjct: 139 DIRATLHFPQSESDILPESGYELEILAGYLVRNAGSRIELMGHTDDV---GDPFKNLLLS 195 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 DR + L+ + RI + GF +D NRR++I + Sbjct: 196 FDRVDEVRKYLVSKHIETTRI-RGKGFGSDLPVAPNDCEANRRLNRRVEIRI 246 >gi|331664170|ref|ZP_08365079.1| YfiB [Escherichia coli TA143] gi|331058627|gb|EGI30605.1| YfiB [Escherichia coli TA143] Length = 160 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAVKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGKIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|300940943|ref|ZP_07155467.1| OmpA family protein [Escherichia coli MS 21-1] gi|300454267|gb|EFK17760.1| OmpA family protein [Escherichia coli MS 21-1] Length = 160 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|194333586|ref|YP_002015446.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii DSM 271] gi|194311404|gb|ACF45799.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii DSM 271] Length = 169 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 7/119 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 + F S+ L++ E + V I GH D Sbjct: 55 LRDEARLALKDVFFSFESADLDILATTQLKRNAEWMIAHPSVSVIIEGHCDER---GTGE 111 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 N L RA + L+K+GV+ RI +S + R A D + NRR +VE Sbjct: 112 FNMALGERRADISKSFLVKAGVASSRIQTVS-YGEERPFEAGHDDSAWAKNRRAHFVVE 169 >gi|160872189|ref|ZP_02062321.1| OmpA/MotB domain protein [Rickettsiella grylli] gi|159120988|gb|EDP46326.1| OmpA/MotB domain protein [Rickettsiella grylli] Length = 175 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + S E LQ L + I G+TD N L RA S Sbjct: 66 FDFNQSFVREEDKPSLQIQAHYLISHPQTKILIVGNTDER---GSREYNIGLGQRRALSV 122 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 + L+ +GVS+ +I +S + + + NRR D+ Sbjct: 123 ERFLIANGVSKKQILTVS-YGAEKPVAFGHSEADYAKNRRADL 164 >gi|119502996|ref|ZP_01625081.1| conserved hypothetical OmpA family protein [marine gamma proteobacterium HTCC2080] gi|119461342|gb|EAW42432.1| conserved hypothetical OmpA family protein [marine gamma proteobacterium HTCC2080] Length = 297 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 9/167 (5%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++ L + ++ + L N ++ E + +++ + +F Sbjct: 123 AAADELQVTEQALLNTQADLALAYTELDKVNADLEIVQEEQQRFAKLALEQLQLEMLFKT 182 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + S L + L + + I G+ D + N LSL RA Q Sbjct: 183 NDSRLTAGGEDRLSLLASFLTRNENLSVRIEGYADPR---GDSASNMALSLARAERVAQQ 239 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQG 343 L+ SGV+ +R+ +S + + +RR+ I + QG Sbjct: 240 LIDSGVAANRM-TVSAHGESQALAGDGDIDAYALDRRVHIAL--DQG 283 >gi|77460739|ref|YP_350246.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1] gi|77384742|gb|ABA76255.1| putative exported flagellar protein [Pseudomonas fluorescens Pf0-1] Length = 302 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F LQ + E + V I GH+D N LS RA + Sbjct: 178 FPGEGIELDAAAKAKLQVMLEYMKADPTVNHIELDGHSDN---SGNRLTNRELSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 +G+ E +I + + + + NRR+++ + Sbjct: 235 VVDFFKANGIQESQI-TVRFHGERYPLVPNTNAANRAKNRRVNVHLAR 281 >gi|83954367|ref|ZP_00963087.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp. NAS-14.1] gi|83841404|gb|EAP80574.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp. NAS-14.1] Length = 665 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 80/274 (29%), Gaps = 15/274 (5%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 G +++ S ++P K D ++ + + Sbjct: 389 VGSILNNGSKVVSNSGDRLVVEDPNGDLRVLKDDDALVRQAGDEVRRETFNDGSSRTTVI 448 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + + + L T +E+ I E + P + Sbjct: 449 KPNGSKIVTILGRDGTVLRRINVDPQGNEYVLFDDTQVEERIVVNELPQVRPQANTLASQ 508 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + L ++ + + V+ V + + + F S+ Sbjct: 509 QNEEALRAALQTQLRGDQAQRYSLRQVRDVRQVRALAPEI-----ELDAVRFATGSAAIQ 563 Query: 246 PETIVVLQKIGEVLA-----HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 PE L KIG ++ VI + GHTDA N LS RA + L Sbjct: 564 PEQARALSKIGTAISNAIKDDPRTVILVEGHTDAVGNAG---YNLALSDRRAETVALALT 620 Query: 301 KS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333 + V + G+ LK+ ++ ANRR Sbjct: 621 EYFDVPPANLIT-QGYGESALKVPTETAEPANRR 653 >gi|332291441|ref|YP_004430050.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332169527|gb|AEE18782.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 649 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 13/118 (11%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 N FD S P+ + L+K+ V+ I +R HTD+ N +LS R Sbjct: 536 NPIYFDFDKSNIRPDASLELEKVIAVMQQYPALKIDVRSHTDSR---APDAYNMKLSQRR 592 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDR 341 S + +++ G+ R+ G+ +L A ++ + NRR + ++ + Sbjct: 593 NVSTIRYIVQQGGIEAYRL-TGRGYGETQLTNACANGIECTEEEHQLNRRSEFIIMAK 649 >gi|218549686|ref|YP_002383477.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia fergusonii ATCC 35469] gi|218357227|emb|CAQ89862.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia fergusonii ATCC 35469] gi|324114316|gb|EGC08285.1| peptidoglycan lipoprotein [Escherichia fergusonii B253] gi|325498076|gb|EGC95935.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia fergusonii ECD227] Length = 173 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 68 NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 172 >gi|302187242|ref|ZP_07263915.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642] Length = 386 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 82/271 (30%), Gaps = 11/271 (4%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 ++ A+ G + + S+ + K +T Sbjct: 20 QTPQSDSAATGGHWWQFGSGSDSADAGTAAKAPAPSPAPAPVAKAAATPAPAAGAENSAP 79 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ S S K D K + + + + + S + Sbjct: 80 WYWPFGSSDSAQAKPDAVADKPAAKPAAPAMVAKSETDSKWWWPFGNDSAKDEPKALPMP 139 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249 + + L A E + I+ F+ L P T+ Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196 Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + ++ +V+ + I GH D N ++S +RA S + SG+ +R Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRLSGLERNR 253 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337 +S+ G + A+D + NRR++IL Sbjct: 254 LSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 283 >gi|320533459|ref|ZP_08034136.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320134317|gb|EFW26588.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 490 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 7/83 (8%) Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKI 322 ++I GHTD N LS RA + L +G+ + ++G ++ Sbjct: 213 GTLTIVGHTDDVQ---DDAYNQALSEKRANTVKTRLGQLTGLDKWN-PSVAGKGESEPRV 268 Query: 323 A--SDPMNSANRRIDILVEDRQG 343 + +D +ANRR++I + G Sbjct: 269 SGTTDEARAANRRVEITLTPTGG 291 >gi|261252511|ref|ZP_05945084.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio orientalis CIP 102891] gi|260935902|gb|EEX91891.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio orientalis CIP 102891] Length = 176 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + +L L+ + ++I GH D N L RA + Sbjct: 76 FAFDNSTIAGDYEEMLAAHAAYLSKNPALEVTIEGHADER---GTPEYNIALGERRANAV 132 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + L GV D+IS +S + + + + + NRR ++ Sbjct: 133 AKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 175 >gi|84388530|ref|ZP_00991077.1| Peptidoglycan-associated lipoprotein [Vibrio splendidus 12B01] gi|84377079|gb|EAP93950.1| Peptidoglycan-associated lipoprotein [Vibrio splendidus 12B01] Length = 180 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + +L L+++ ++ +I GH D N L RA + Sbjct: 80 FAFDNSTIAGDYEEILAAHAAYLSNNVDMNVTIEGHADER---GTPEYNIALGERRAQAV 136 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + L GV D+IS +S + + + + + NRR ++ Sbjct: 137 AKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 179 >gi|296280733|gb|ADH04664.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + +R +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDRDKDGVLDKDDLCPDTPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDGDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + ++ F+ + + PE+ L Sbjct: 215 TDNDGVLDKDDKCPTVPGLPQYDGCPKPQSAFAAEATGALQGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|269965412|ref|ZP_06179532.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|269830058|gb|EEZ84287.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 339 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 8/116 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288 + F+ L+ + ++ I I GHTD + N +S Sbjct: 205 RDMALSFEFGQKTLSRGQKATLEALYSYVSVDDRVTKILIDGHTDNV---GSSLTNLSVS 261 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 RA L++ GV E + + +++ + NRR+ + + Sbjct: 262 RTRAEQVTNALIELGVDES-MIETRAHGSRYPIASNNSVNGQAKNRRVTLRLVRDN 316 >gi|167855024|ref|ZP_02477798.1| outer membrane protein precursor PalA [Haemophilus parasuis 29755] gi|167853872|gb|EDS25112.1| outer membrane protein precursor PalA [Haemophilus parasuis 29755] Length = 153 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 8/108 (7%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 + + NT FD S E +L + L S +++ GH D N L Sbjct: 47 LQTRYNTVYFDFDSYTVKAEDQQLLDAHAQYLVASKGKVTVAGHADER---GTPEYNIAL 103 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 RA + L G ++ +S + + + S NRR Sbjct: 104 GQRRADAVKDFLATKG--ASNVATVS-YGEEKPAVLGHSEADYSKNRR 148 >gi|187736002|ref|YP_001878114.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187426054|gb|ACD05333.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 478 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 95/302 (31%), Gaps = 27/302 (8%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID---LSIDEHITKNSVDLKIGSTNQK 121 I + G ++ A D + PE+ D + E + K ++ + Sbjct: 60 IVLSWFDLGIHVHKAPTVQEDRKPLPEKIVLKADDRPAPDVAEAVEKPDIEQLEEIPPEL 119 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + ++ + S E D+ P + K Sbjct: 120 PDLEDMLPEQVVIAPGETSFSADPVSPSPPESLSPKMPQVDMNAVAKGLPEPSPPEMLKS 179 Query: 182 KILA---MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP--- 235 + + + + ++ L G + + + ++ +++ Sbjct: 180 SASPVTIKTAEPDMVNPDEWYNNKLKGAGGQDDSHLPDGSKSLSQLMAQSSLGKDSGYSR 239 Query: 236 -----MFDKSSSIPLPETI-VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 +F+ + ++ +LQ G ++ + + + GHTD+ N LSL Sbjct: 240 LGADLLFEYNKAVMKNSARLSMLQLAGLMMKNPDTIFIVEGHTDSF---GSEEYNAVLSL 296 Query: 290 DRAYSAYQVLMKSGVSEDR-----ISKISGFAHHRLKIA---SDPMNSANRRIDILVEDR 341 RA + Q L +G++ R I R ++ +ANRR++I + Sbjct: 297 MRANAVRQWLKDNGIALTRPNGECRLYIRACGSSRPVVSIRGDRDAQAANRRVEIH-MRK 355 Query: 342 QG 343 G Sbjct: 356 PG 357 >gi|91223208|ref|ZP_01258474.1| putative sodium-type flagellar protein MotY precursor [Vibrio alginolyticus 12G01] gi|91192021|gb|EAS78284.1| putative sodium-type flagellar protein MotY precursor [Vibrio alginolyticus 12G01] Length = 313 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 8/116 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288 + F+ L+ + ++ I I GHTD + N +S Sbjct: 179 RDMALSFEFGQKTLSRGQKATLEALYSYVSVDDRVTKILIDGHTDNV---GSSLTNLSVS 235 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 RA L++ GV E + + +++ + NRR+ + + Sbjct: 236 RTRAEQVTNALIELGVDES-MIETRAHGSRYPIASNNSVNGQAKNRRVTLRLVRDN 290 >gi|296410008|gb|ADH15780.1| OmpP6 [Haemophilus influenzae] Length = 136 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 7/135 (5%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 ++ +T + + + NT F E + +L L Sbjct: 4 AACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNA 63 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + + G+TD N L RA + L GV ++ +S + + Sbjct: 64 TPAAKVLVEGNTDER---GTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKP 119 Query: 321 KIASDPMNS--ANRR 333 + + NRR Sbjct: 120 AVLGHDEAAYSKNRR 134 >gi|219870352|ref|YP_002474727.1| 18K peptidoglycan-associated outer membrane lipoprotein PalA [Haemophilus parasuis SH0165] gi|219690556|gb|ACL31779.1| 18K peptidoglycan-associated outer membrane lipoprotein, precursor PalA [Haemophilus parasuis SH0165] Length = 153 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 8/108 (7%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 + + NT FD S E +L + L S +++ GH D N L Sbjct: 47 LQTRYNTVYFDFDSYTLKAEDQQLLDAHAQYLVASKGKVTVAGHADER---GTPEYNIAL 103 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 RA + L G ++ +S + + + S NRR Sbjct: 104 GQRRADAVKDFLATKG--ASNVATVS-YGEEKPAVLGHSEADYSKNRR 148 >gi|187233929|gb|ACD01211.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus] Length = 174 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + +L L+ + ++I GH D N L RA + Sbjct: 74 FAFDNSTIAADYEEMLAAHASYLSKNPALNVTIEGHADER---GTPEYNIALGERRAQAV 130 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L GV D+IS +S + + + + NRR ++ Sbjct: 131 ANYLQALGVQADQISIVS-YGEEKPLLLGQSDEVYAKNRRAVLV 173 >gi|330871941|gb|EGH06090.1| OmpA domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 666 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 33/254 (12%), Positives = 72/254 (28%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 415 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 474 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 475 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 534 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEV--ISIRGHTDAS 275 ++ I I + +F + E L I L + + I I GH D Sbjct: 535 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIMIAGHADQL 594 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + + G + + D Sbjct: 595 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVKCDMQQPRAQLIQ 650 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 651 CLEPNRRVEIEVRA 664 >gi|241764618|ref|ZP_04762633.1| peptidoglycan-associated lipoprotein [Acidovorax delafieldii 2AN] gi|241365939|gb|EER60569.1| peptidoglycan-associated lipoprotein [Acidovorax delafieldii 2AN] Length = 178 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 7/105 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 FD S + PE +++ + S+ + GHTD N L RA Sbjct: 75 VYFDYDSYVIKPEFQSLIEAHARFIKSSSNRKVVVEGHTDER---GGREYNLALGQKRAE 131 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 + + L GV + ++ +S F +L + + +++ NRR ++ Sbjct: 132 AVRRSLGLLGVPDSQVEAVS-FGKEKLAVQGTGEDVHAQNRRAEL 175 >gi|42768700|gb|AAS45565.1| putative outer membrane protein [Aeromonas hydrophila] Length = 344 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 18/125 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 + +F E + L + + + + G+TD N +LS Sbjct: 220 NSDVLFAFGKDSLKSEGVAALNGLYQQIVEFQPKDGNAVVVGYTDRI---GSDDYNQKLS 276 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------PMNSANRRIDIL 337 RA + L+ G++ ++ + G + + +RR+++ Sbjct: 277 EARARTVANFLVSKGMAASKV-AVEGRGEANPVTGTKCNGVKAKAQLISCLAPDRRVEVR 335 Query: 338 VEDRQ 342 V Q Sbjct: 336 VSGVQ 340 >gi|6012949|emb|CAB57308.1| putative outer-membrane protein A [Pectobacterium carotovorum] Length = 367 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 24/129 (18%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + + E L ++ L+ + + G +D + N LS Sbjct: 233 KSDVLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFSDRL---GSEQYNQALS 289 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----AS-------DPMN------SAN 331 RA S L+ G+ +++S G + + + + Sbjct: 290 EKRAQSVVDYLVSKGIPANKVSA-RGLGKSQPVTGSTCDNVYKQGRAATKAQLIDCLAPD 348 Query: 332 RRIDILVED 340 RR++I V+ Sbjct: 349 RRVEIEVKG 357 >gi|78485244|ref|YP_391169.1| OmpA/MotB [Thiomicrospira crunogena XCL-2] gi|78363530|gb|ABB41495.1| Tol system Pal protein [Thiomicrospira crunogena XCL-2] Length = 205 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD I ++ ++ +L + E I + GHTD N L RA + Sbjct: 104 FDYDQYIVDDTSLETVKHYATILIDNPSEKIQLVGHTDER---GTPEYNLALGEKRAKAV 160 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 + M GV +DRI ++ + ++ + NRR++I Sbjct: 161 AEAFMLYGVHKDRI-EVISLGEELPVMEGHNEEAWAKNRRVEI 202 >gi|317049504|ref|YP_004117152.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b] gi|316951121|gb|ADU70596.1| OmpA/MotB domain protein [Pantoea sp. At-9b] Length = 157 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + S PE+ + ++ LA + E + I GHTD N +LSL R Sbjct: 49 DKILFGINESELTPESKTTINRMATNLAATGIEHLRIDGHTDNY---GTDSYNEQLSLKR 105 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A + + + G +++ + NRR+ +++ Sbjct: 106 ANAVAAQWAEGASLPRSNIETRGLGKKYPVTSNNSAQGRAQNRRVAVVITAP 157 >gi|86151560|ref|ZP_01069774.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|121613602|ref|YP_001000300.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|167005251|ref|ZP_02271009.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|315124117|ref|YP_004066121.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841189|gb|EAQ58437.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|87250368|gb|EAQ73326.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|315017839|gb|ADT65932.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 317 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 100/321 (31%), Gaps = 52/321 (16%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+++ + + + Sbjct: 12 W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151 + + ++ +L+ K L N L+ + Q + ++T Sbjct: 45 KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK---KISSTLSGLVA 208 + KDL + D + L +E + ++ ++ + I LS + Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGFIRENLSKELQ 164 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258 + + + I + +FDK S + E L+K Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316 + + E I I GHTD+ N LS RAY + S+ ++ SG + Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276 Query: 317 HHRLKIASDPMN-SANRRIDI 336 + + +RRI+I Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297 >gi|332293580|ref|YP_004432189.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332171666|gb|AEE20921.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 368 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/293 (12%), Positives = 87/293 (29%), Gaps = 20/293 (6%) Query: 60 DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119 + I + + ++ G P S+ + + + Sbjct: 79 KRLRVIPATYKTETVTYVKSTSGSSLRIVPASFSNDTETIEVKSAYAQWELGAPAPDCAS 138 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 R + ++ + K +L D+ S + ++ + Sbjct: 139 SNPDDCRYW--CYKGYPAEYTTVSKRTLASDATVQSTPGGSANGTYTVRVIDQPASVVEE 196 Query: 180 KEKILAMK-----RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + K + +++T + + + + T R + Q Sbjct: 197 EIPAEFATITKTVMVKDATTTEEVVAATFDTVSKEVLKQKGGLTTWREVECALVEYQALP 256 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 ++ +S+ P ++ L + + I HTD+ + N LS RA Sbjct: 257 INWNTNSATLTPAAKSIIDTRLMPLLAQNPGVKLEIASHTDSR---GASSSNQDLSERRA 313 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 S L+ GV+ + +GF +LK ++ ++ NRR + + Sbjct: 314 QSVANYLISKGVNNSLLVA-NGFGERKLKNRCADGVSCTERQHADNRRTEFRL 365 >gi|330815667|ref|YP_004359372.1| OmpA domain protein [Burkholderia gladioli BSR3] gi|327368060|gb|AEA59416.1| OmpA domain protein [Burkholderia gladioli BSR3] Length = 171 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 13/167 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM--- 236 LA+ L + N ++ T + + ++ N+P+ Sbjct: 6 ARLALAVMMISALAACKSGVKLDDKANQQGNALQTQPNPTDVAQVNVDPLNDPNSPLAKR 65 Query: 237 ---FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292 FD S + +L + + L I I+G+TD + N L RA Sbjct: 66 SIYFDFDSYSVSDQYQSLLAQHAQYLKSHPARHILIQGNTDER---GTSEYNLALGQKRA 122 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337 + + L GV + ++ +S + + + NRR DI+ Sbjct: 123 EAVRRGLSLLGVPDSQMESVS-LGKEKPQALGHDEASWAQNRRADIV 168 >gi|296273863|ref|YP_003656494.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296098037|gb|ADG93987.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299] Length = 180 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 6/105 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + F + V L + + I G+ D N+ L L RA Sbjct: 75 ESIYFGFDKFKLTEDQRKVASDNASKLKGLSGSVKIEGNCDEW---GTDEYNYALGLKRA 131 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 L+ G++ + IS +S F + + NRR + Sbjct: 132 KVVKDALVSDGIASNSISIVS-FGESNPVCSEKTKECWAKNRRAE 175 >gi|77465487|ref|YP_354990.1| OmpA family outer membrane protein [Rhodobacter sphaeroides 2.4.1] gi|77389905|gb|ABA81089.1| Possible outer membrane protein, OmpA family [Rhodobacter sphaeroides 2.4.1] Length = 453 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 8/130 (6%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDAS 275 + I + + +F + + + ++ + VLA + + + GHTD Sbjct: 324 REDAQLTILTLQGTDPELFRSARAEVNADYAPLVASVAAVLAENRELVGAVRVIGHTDNV 383 Query: 276 PF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSAN 331 P N N LS RA + +L++ GV I G A + + N Sbjct: 384 PVQRSNPFASNQGLSEARAATLAALLVEGGVPAG-IVTAEGHADSEPVADNATRAGRAQN 442 Query: 332 RRIDILVEDR 341 RR++I +E R Sbjct: 443 RRVEIRIEKR 452 >gi|66048188|ref|YP_238029.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] gi|63258895|gb|AAY39991.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] Length = 830 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 33/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 ++ I I + +F + E L I L + + I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + I G + + D Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAI-GEGSEKPLVKCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|261211899|ref|ZP_05926186.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp. RC341] gi|260839249|gb|EEX65881.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp. RC341] Length = 172 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + T F ++ + +L L + +++ GH D N L Sbjct: 66 ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTVEGHADER---GTPEYNIALGE 122 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV +IS +S + + + + NRR ++ Sbjct: 123 RRAQAVSKYLEALGVQAGQISIVS-YGEEKPLVLGQSEEAYAKNRRAVLV 171 >gi|327313465|ref|YP_004328902.1| OmpA family protein [Prevotella denticola F0289] gi|326946064|gb|AEA21949.1| OmpA family protein [Prevotella denticola F0289] Length = 697 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 47/138 (34%), Gaps = 34/138 (24%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + +D + PE+ L ++ ++L + I + HTD + A N RLS R Sbjct: 529 DNIFYDFDKATLRPESEKALNELVKLLEENPNVTIELSAHTD---YIGSAEYNKRLSQRR 585 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL-------------KIASD------------- 325 A + L G+ DR++ + G+ R +D Sbjct: 586 ADAVVAYLTSHGIVRDRLTPV-GYGKERPKKIRRKLTEKYPWLKENDILTEDFIKKLDKE 644 Query: 326 ---PMNSANRRIDILVED 340 N NRR + V Sbjct: 645 KQEIANQLNRRTEFTVLR 662 >gi|71906334|ref|YP_283921.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71845955|gb|AAZ45451.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 165 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + E +LQ+ E+L + +S+ G+TD + N L RA + Sbjct: 62 FDYDNFTIKTEYNALLQQQAELLKRYPKLGVSLEGNTDER---GSSEYNLSLGQKRAEAV 118 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 + L GV E ++ +S F + K + S NRR+D Sbjct: 119 RKALTILGVPEAKVEAVS-FGKEKPKADCPEEKCWSQNRRVDF 160 >gi|88597019|ref|ZP_01100255.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218562250|ref|YP_002344029.1| putative OmpA family membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88190708|gb|EAQ94681.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112359956|emb|CAL34745.1| putative OmpA family membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925860|gb|ADC28212.1| putative OmpA family membrane protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315928819|gb|EFV08086.1| ompA family protein [Campylobacter jejuni subsp. jejuni 305] Length = 317 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 100/321 (31%), Gaps = 52/321 (16%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+++ + + + Sbjct: 12 W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151 + + ++ +L+ K L N L+ + Q + ++T Sbjct: 45 KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208 + KDL + D + L +E + ++ ++ + I LS + Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQ 164 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258 + + + I I +FDK S + E L+K Sbjct: 165 SKLDNNITIDE-----KIGSISLPAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316 + + E I I GHTD+ N LS RAY + S+ ++ SG + Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276 Query: 317 HHRLKIASDPMN-SANRRIDI 336 + + +RRI+I Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297 >gi|156976391|ref|YP_001447297.1| hypothetical protein VIBHAR_05164 [Vibrio harveyi ATCC BAA-1116] gi|156527985|gb|ABU73070.1| hypothetical protein VIBHAR_05164 [Vibrio harveyi ATCC BAA-1116] Length = 301 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 85/292 (29%), Gaps = 33/292 (11%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + I + P + ++ +++ + +D+ I + Sbjct: 34 FADVNVSKF-LISECLAPQREIHFAVAEHFDFDKSFIREADAVSLDVFIRNIQGLSGRIT 92 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 +G T+ K + N +S D E+ K + + ++ Sbjct: 93 IVGHTDFKGSDE---YNDKLSMRRAESVEAYLQQQLDPEQYDWEVKHFGESQPLALGKSD 149 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 ++ + + ++ +++ + + Sbjct: 150 QDRAENRRAYVMFEEAQKYEEMPFCEPPKPERKIYMAMTPH------------------- 190 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S PE + L L I + GHTD N +L+ RA Sbjct: 191 ---FDFDKSELKPEDLSQLDDFIAKLQGLEGSIMVAGHTDQV---GSLSYNEQLAERRAQ 244 Query: 294 SAYQVLMKSGVSEDRIS-KISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 + L K+ + + ++ F + I + + NRR I+ ++ + Sbjct: 245 TVVAYL-KTKLDPSQFVWEVKAFGELQPVINEESPEANALNRRAFIVFKESE 295 >gi|86153447|ref|ZP_01071651.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843173|gb|EAQ60384.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni HB93-13] Length = 317 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 100/323 (30%), Gaps = 56/323 (17%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+++ + + + Sbjct: 12 W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151 + + ++ +L+ K L N L+ + Q + ++T Sbjct: 45 KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK---KISSTLSGLVA 208 + KDL + D + L +E + ++ ++ + I LS + Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGFIRENLSKELQ 164 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258 + + + I + +FDK S + E L+K Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL----MKSGVSEDRISKISG 314 + + E I I GHTD+ N LS RAY + + + ++ SG Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSNKL--QKLLMASG 274 Query: 315 FAHHRLKIASDPMN-SANRRIDI 336 + + + +RRI+I Sbjct: 275 RSFSDPVFVNGVEDKDKSRRIEI 297 >gi|238792361|ref|ZP_04635995.1| Outer membrane protein A [Yersinia intermedia ATCC 29909] gi|238728287|gb|EEQ19807.1| Outer membrane protein A [Yersinia intermedia ATCC 29909] Length = 358 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L+ + + G D N LS Sbjct: 230 KSDVLFAFNKATLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK-----IASDPMNSA------NRRIDIL 337 RA S L+ G+ D+I+ G P + +RR++I Sbjct: 287 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGSTCATVKPRAALIECLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|209520168|ref|ZP_03268940.1| OmpA/MotB domain protein [Burkholderia sp. H160] gi|209499375|gb|EDZ99458.1| OmpA/MotB domain protein [Burkholderia sp. H160] Length = 116 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 7/108 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+I L + V +I G+TD++ N +LS RA S Sbjct: 9 FATDSAILSSAAKASLDQFLRVNEGINFRRVTIIGYTDST---GSRGHNQKLSEARAQSV 65 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + L G+ G A ++ NRR+++ V Sbjct: 66 LRYLRDHGLIAQSFVA-EGAAADDPVASNATAEGRALNRRVEVRVVAS 112 >gi|328468979|gb|EGF39939.1| putative outer membrane protein [Vibrio parahaemolyticus 10329] Length = 206 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 7/177 (3%) Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 ++ ++ LQD L + + + Sbjct: 17 QQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAGSEVDNDGCGEYIKASE 76 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLS 288 + +F S P ++++ E L I ++G+ + ++ N LS Sbjct: 77 KMQVRVLFANDSDEINPVFRRQIRELSEFLKDYPTTSIELQGYASKT---GDSKHNQDLS 133 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343 RA + L+ G+ +R+ +I GF L ++ NRR+ V +G Sbjct: 134 ERRAKNVRDALLSYGIEPNRV-RIIGFGDTHLAEQGTDQVSHALNRRVTASVVGYKG 189 >gi|317009174|gb|ADU79754.1| flagellar motor protein MotB [Helicobacter pylori India7] Length = 257 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VLM+ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLAKTRFKSHYELAANRAYRVMKVLMQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|58617307|ref|YP_196506.1| peptidoglycan-associated lipoprotein precursor [Ehrlichia ruminantium str. Gardel] gi|58416919|emb|CAI28032.1| Peptidoglycan-associated lipoprotein precursor [Ehrlichia ruminantium str. Gardel] Length = 216 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 12/117 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + FD ++ V+L+K+ + T I I GHTD N L R Sbjct: 43 DKVYFDLDKTVIKDSDKVLLEKLVQKAQEDPTTDIIIVGHTDTR---GTDEYNLALGEQR 99 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMN-----SANRRIDILVED 340 A + ++ S ++ + +++P + NRR+ I + + Sbjct: 100 ANAVRDFIISCDKSLEKRITVRSKGKSEPAILVYSNNPKEAEDAHAKNRRVVITLVN 156 >gi|57239289|ref|YP_180425.1| peptidoglycan-associated lipoprotein precursor [Ehrlichia ruminantium str. Welgevonden] gi|58579253|ref|YP_197465.1| peptidoglycan-associated lipoprotein precursor [Ehrlichia ruminantium str. Welgevonden] gi|57161368|emb|CAH58291.1| hypothetical protein Erum5620 [Ehrlichia ruminantium str. Welgevonden] gi|58417879|emb|CAI27083.1| Peptidoglycan-associated lipoprotein precursor [Ehrlichia ruminantium str. Welgevonden] Length = 217 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 12/117 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + FD ++ V+L+K+ + T I I GHTD N L R Sbjct: 43 DKVYFDLDKTVIKDSDKVLLEKLVQKAQEDPTTDIIIVGHTDTR---GTDEYNLALGEQR 99 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMN-----SANRRIDILVED 340 A + ++ S ++ + +++P + NRR+ I + + Sbjct: 100 ANAVRDFIISCDKSLEKRITVRSKGKSEPAILVYSNNPKEAEDAHAKNRRVVITLVN 156 >gi|57238205|ref|YP_178714.1| chemotaxis protein MotB, putative [Campylobacter jejuni RM1221] gi|86149924|ref|ZP_01068153.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|148925958|ref|ZP_01809645.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8486] gi|283956011|ref|ZP_06373500.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 1336] gi|57167009|gb|AAW35788.1| chemotaxis protein MotB, putative [Campylobacter jejuni RM1221] gi|85839742|gb|EAQ57002.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|145844944|gb|EDK22048.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8486] gi|283792487|gb|EFC31267.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 1336] gi|315927335|gb|EFV06679.1| Chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 317 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 100/321 (31%), Gaps = 52/321 (16%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+++ + + + Sbjct: 12 W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151 + + ++ +L+ K L N L+ + Q + ++T Sbjct: 45 KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208 + KDL + D + L +E + ++ ++ + I LS + Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQ 164 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258 + + + I + +FDK S + E L+K Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316 + + E I I GHTD+ N LS RAY + S+ ++ SG + Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276 Query: 317 HHRLKIASDPMN-SANRRIDI 336 + + +RRI+I Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297 >gi|329849879|ref|ZP_08264725.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19] gi|328841790|gb|EGF91360.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19] Length = 268 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 63/248 (25%), Gaps = 8/248 (3%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 + E K+ K+ L+ + + Sbjct: 23 STTKTETETRLKSEAAAKLTQAGVTGVTVTASGQDLVLNGKPDKIAAAQAALKPDGFWTG 82 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + + + A SS + + K + Sbjct: 83 PVVAVRVMTATTVATASPAVASESVSATQSVSSSSASTSAAATSSAAATVAEPAPAKPLN 142 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDA 274 R I+ + ++ P+ ++++ VL + I G+TD Sbjct: 143 RAGQRCQDRINSAVAGGGIGYRFNAYELTPQGERTMREVHRVLKRCPAEVKLTITGYTDN 202 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 N LS RA A L +G +D+++ + G ++ NR Sbjct: 203 V---GADEVNKSLSAGRAVDAMNALTAAGWPDDKVTAV-GAGSADPVASNATAAGRKKNR 258 Query: 333 RIDILVED 340 R+ + Sbjct: 259 RVVFTLSS 266 >gi|239946700|ref|ZP_04698453.1| peptidoglycan-associated lipoprotein [Rickettsia endosymbiont of Ixodes scapularis] gi|239920976|gb|EER21000.1| peptidoglycan-associated lipoprotein [Rickettsia endosymbiont of Ixodes scapularis] Length = 155 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P+ L++ L+ E +I GH D N L RA A Sbjct: 53 FAFDSSALSPKAKEELERQACWLSKHPEVKATIEGHCDER---GTREYNLGLGERRAAVA 109 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337 + L G+ +R++ IS + R + + + NRR + ++ Sbjct: 110 KKFLANKGIDHNRLNTIS-YGKDRPAMMGNTEEAFAYNRRAVTVV 153 >gi|84515731|ref|ZP_01003092.1| OmpA/MotB family protein [Loktanella vestfoldensis SKA53] gi|84510173|gb|EAQ06629.1| OmpA/MotB family protein [Loktanella vestfoldensis SKA53] Length = 307 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 12/132 (9%) Query: 217 FETTRTGILISIIDQRNTPM----FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGH 271 + + D + + F S+ L ++ LA + + GH Sbjct: 178 VGQANGSLAQQLDDLGHAILRDLDFTIGSAQLSEAAFASLAELAAYLAAYPDRSVALVGH 237 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS--DPMN 328 TD+ N LS RA + L+ + GV+ ++ G + ++ + Sbjct: 238 TDS---AGALDINIALSQRRARAVLDRLVTRHGVNRRQL-AAEGMGYLAPIASNQTETGR 293 Query: 329 SANRRIDILVED 340 ANRR++++V Sbjct: 294 DANRRVEVIVTS 305 >gi|330815889|ref|YP_004359594.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3] gi|327368282|gb|AEA59638.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3] Length = 218 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD + P L ++ + + + G+TD + N RLSL Sbjct: 98 QADALFDFDKATLKPLGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLR 154 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339 RA + L+ GV ++ G N N RR+++ V Sbjct: 155 RAQAVKSYLVSKGVESSKVYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 211 Query: 340 DRQ 342 Q Sbjct: 212 GTQ 214 >gi|238026527|ref|YP_002910758.1| OmpA/MotB domain-containing protein [Burkholderia glumae BGR1] gi|237875721|gb|ACR28054.1| OmpA/MotB domain protein [Burkholderia glumae BGR1] Length = 218 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + +FD + P L ++ + + + G+TD + N RLSL Sbjct: 98 QADALFDFDKATLKPLGKQKLDELAAKIQGMNVEVVVATGYTDRI---GSDKYNDRLSLR 154 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDILVE 339 RA + L+ GV ++ G N N RR+++ V Sbjct: 155 RAQAVKSYLVSKGVESSKVYT-EGKGKRNPVTTG--CNQKNRKQLIACLAPDRRVEVEVV 211 Query: 340 DRQ 342 Q Sbjct: 212 GTQ 214 >gi|317180579|dbj|BAJ58365.1| flagellar motor protein MotB [Helicobacter pylori F32] Length = 257 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 84/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G S++ ++ +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|312142545|ref|YP_003993991.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus'] gi|311903196|gb|ADQ13637.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus'] Length = 352 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD 273 V E + + F+ SS L ++ VL +I ++L + E + + GHTD Sbjct: 226 VSVENMEDDLSRTGKAAIYGINFEFDSSQILADSHDVLAEIAKLLLENPELRLYVVGHTD 285 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSA 330 + N LS RA S L+ ++ DR+ G + + + Sbjct: 286 DL---GSLQYNRNLSERRAESVVDFLIDNHDIASDRLISA-GVGPLAPESTNKTESGRAL 341 Query: 331 NRRIDIL 337 NRR+ ++ Sbjct: 342 NRRVVLV 348 >gi|330954871|gb|EGH55131.1| OmpA/MotB [Pseudomonas syringae Cit 7] Length = 831 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 88/299 (29%), Gaps = 19/299 (6%) Query: 57 TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116 +E + +T S + +R++ ++ + + ++ + Sbjct: 535 VRQGYFARLESVMLKPTADNLTRSLYLLSSIKIYQRNAPTLTTVTGIDSVEPRALPVDNR 594 Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 + + + + LS +Q+ + L +++ N Sbjct: 595 AQSVATFGKTTLDTYLMLSKAQREQADPAVLKARIPDYWYPAIYKQVQRDTNVSAQAAGE 654 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTP 235 + Q + L+ + + + +++ I I + Sbjct: 655 VDDYQFAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETITLESDT 714 Query: 236 MFDKSSSIPLP---ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLD 290 +F + L I L ++ I I GH D A+ N ++S Sbjct: 715 LFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQI---GDAQSNLQVSRQ 771 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340 RA + L+ G+ + + + G ++ + D NRR++I V Sbjct: 772 RAQTIKTYLVGKGLPSELVDAV-GEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEVRA 829 >gi|315634712|ref|ZP_07889996.1| peptidoglycan-associated lipoprotein [Aggregatibacter segnis ATCC 33393] gi|315476660|gb|EFU67408.1| peptidoglycan-associated lipoprotein [Aggregatibacter segnis ATCC 33393] Length = 150 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 + + NT F E +L L + + I G+TD N Sbjct: 41 LQQRYNTVYFGFDKYNVEGEYAQILDAHAAYLNATPATNVRIEGNTDER---GTPEYNMA 97 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 L RA++ L GV +IS +S + + + + NRR Sbjct: 98 LGERRAHAVQSFLTAKGVQAGQISTVS-YGEEKPAVLGHDEAAYAKNRR 145 >gi|114049133|ref|YP_739683.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7] gi|113890575|gb|ABI44626.1| OmpA/MotB domain protein [Shewanella sp. MR-7] Length = 185 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + +F S+ PE +++I L +I GHT + N LS Sbjct: 57 KEINVLFPNDSAYIAPEYYPQIEEIAMFLRQYPTTKVTIEGHTSRT---GTDERNAVLSQ 113 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 +RA + VL + R++ I G+ R + ++ NRR+ Sbjct: 114 ERADAVTAVLADRFSIDRSRLTAI-GYGSSRPLVLEHTPDAETRNRRV 160 >gi|295675611|ref|YP_003604135.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1002] gi|295435454|gb|ADG14624.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1002] Length = 168 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + +LQ+ + L + + I+G+TD + N L RA + Sbjct: 66 FDFDSYSVKDDYQPLLQQHAQYLKGHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 122 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 + L GVS+ ++ +S + + + NRR D+ Sbjct: 123 RRSLSLMGVSDSQMEAVS-LGKEKPLATGHDEASWAQNRRADL 164 >gi|209964212|ref|YP_002297127.1| chemotaxis MotB protein, putative [Rhodospirillum centenum SW] gi|7025367|gb|AAF35853.1|AF220007_1 polar flagellar motor protein MopB [Rhodospirillum centenum] gi|209957678|gb|ACI98314.1| chemotaxis MotB protein, putative [Rhodospirillum centenum SW] Length = 239 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 10/135 (7%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 VL +++++ +F + P + L +G V + + + GHTD Sbjct: 108 QVLITRRDGRLVLALPADL---LFAPGDAALSPAGLRALFVLGGVAGNIGNALEVVGHTD 164 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR-----LKIASDPMN 328 P + NW LSL RA + L +G R + G A + + Sbjct: 165 PRPAGSRWPSNWELSLARAQAVADALHGAGYL--RAITVRGQADAQFPETAPFLPVAERM 222 Query: 329 SANRRIDILVEDRQG 343 RR+D++V + G Sbjct: 223 RLARRVDVIVAEHGG 237 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 17/167 (10%), Positives = 51/167 (30%), Gaps = 7/167 (4%) Query: 30 LGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP 89 +W + + D + +++ FF++++ ++ D +A+ + N Sbjct: 19 GRAWLVSFTDLVCLMLTFFVMLYAMSDPADPRYRALAGGLHGDLAVRAEGEAAPEAAFNV 78 Query: 90 PERSSQNKID-------LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 + + ID + I + + + +F ++ S Sbjct: 79 DRLNREQAIDLGYLGRVFETQMAGHPELAQVLITRRDGRLVLALPADLLFAPGDAALSPA 138 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 +L ++ + ++ + P + E LA + Sbjct: 139 GLRALFVLGGVAGNIGNALEVVGHTDPRPAGSRWPSNWELSLARAQA 185 >gi|28898409|ref|NP_798014.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD 2210633] gi|260895070|ref|ZP_05903566.1| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|260900920|ref|ZP_05909315.1| outer membrane protein [Vibrio parahaemolyticus AQ4037] gi|308094379|ref|ZP_05888926.2| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|28806626|dbj|BAC59898.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD 2210633] gi|308086027|gb|EFO35722.1| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|308093578|gb|EFO43273.1| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|308110719|gb|EFO48259.1| outer membrane protein [Vibrio parahaemolyticus AQ4037] Length = 206 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 57/177 (32%), Gaps = 7/177 (3%) Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 ++ ++ LQD L + + + Sbjct: 17 QQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAGSEVDNDGCGEYIKASE 76 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLS 288 + +F S P ++++ + L I ++G+ + ++ N LS Sbjct: 77 KMQVRVLFANDSDEINPVFRRQIRELSDFLKDYPTTSIELQGYASKT---GGSKHNQDLS 133 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343 RA + L+ G+ +R+ +I GF L ++ NRR+ V +G Sbjct: 134 ERRAKNVRDALLSYGIEPNRV-RIIGFGDTHLAEQGTDQVSHALNRRVTASVVGYKG 189 >gi|304395720|ref|ZP_07377603.1| peptidoglycan-associated lipoprotein [Pantoea sp. aB] gi|308186084|ref|YP_003930215.1| Peptidoglycan-associated lipoprotein precursor [Pantoea vagans C9-1] gi|304357014|gb|EFM21378.1| peptidoglycan-associated lipoprotein [Pantoea sp. aB] gi|308056594|gb|ADO08766.1| Peptidoglycan-associated lipoprotein precursor [Pantoea vagans C9-1] Length = 175 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N F + +L + L + +I GH D N L Sbjct: 70 NNIVYFGLDKYDVQSDYAQMLDQHATFLRSNPSYKVTIEGHADER---GTPEYNIALGER 126 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + L GVS D++S +S + + + + NRR ++ Sbjct: 127 RANAVKMYLQGKGVSADQMSIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 174 >gi|254381948|ref|ZP_04997311.1| secreted protein [Streptomyces sp. Mg1] gi|194340856|gb|EDX21822.1| secreted protein [Streptomyces sp. Mg1] Length = 262 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 27/236 (11%), Positives = 67/236 (28%), Gaps = 21/236 (8%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 +T+ + + + + ++ D + Sbjct: 38 PLTRPHSRSPGDPMTTRHRTSAATAVVGLVIAGAHFMGAASAHADDVKPSTPPGTEASAS 97 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + + + L + +LA + + ++ + + + V L Sbjct: 98 PPVAVKPDSPRLKLPQGGVLAAPKVLDMVEVVEDLGGEQRRQETNQTVMMAL-------- 149 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARD 283 ++ +F + SS+ + +Q I + + + G TD Sbjct: 150 -------QSEVLFPEDSSVFNAQAAARIQAIANEINQQKATRVRVFGFTDDQ---GSYEH 199 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 LS RA + L K+ + I + G++ + NRR++I Sbjct: 200 GKELSKKRADAVQVELAKTVTNPSVIFDVRGYSEDYPIADNGTEEGRKKNRRVEIT 255 >gi|189349521|ref|YP_001945149.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC 17616] gi|221201005|ref|ZP_03574045.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia multivorans CGD2M] gi|221206543|ref|ZP_03579556.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia multivorans CGD2] gi|221214397|ref|ZP_03587368.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia multivorans CGD1] gi|189333543|dbj|BAG42613.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC 17616] gi|221165654|gb|EED98129.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia multivorans CGD1] gi|221173852|gb|EEE06286.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia multivorans CGD2] gi|221178855|gb|EEE11262.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia multivorans CGD2M] Length = 169 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E +LQ+ + L + + I+G+TD + N L RA + Sbjct: 67 FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV++ ++ +S + + + + NRR D++ Sbjct: 124 RRALALLGVADSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 166 >gi|331648347|ref|ZP_08349435.1| YfiB [Escherichia coli M605] gi|330912368|gb|EGH40878.1| integral membrane protein YfiB [Escherichia coli AA86] gi|331042094|gb|EGI14236.1| YfiB [Escherichia coli M605] Length = 160 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 108 Query: 292 AYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G + + G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGQIPRSNLIT-QGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|238757961|ref|ZP_04619142.1| Peptidoglycan-associated lipoprotein [Yersinia aldovae ATCC 35236] gi|238703715|gb|EEP96251.1| Peptidoglycan-associated lipoprotein [Yersinia aldovae ATCC 35236] Length = 168 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277 + + + + + N F + +L L + + GH D Sbjct: 50 EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHSAFLRSNPSYKVVVEGHADER-- 107 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA + L GVS D+IS +S + + + + NRR Sbjct: 108 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 165 Query: 336 IL 337 ++ Sbjct: 166 LV 167 >gi|325860329|ref|ZP_08173451.1| OmpA family protein [Prevotella denticola CRIS 18C-A] gi|325482208|gb|EGC85219.1| OmpA family protein [Prevotella denticola CRIS 18C-A] Length = 697 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 47/138 (34%), Gaps = 34/138 (24%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + +D + PE+ L ++ ++L + I + HTD + A N RLS R Sbjct: 529 DNIFYDFDKATLRPESEKALNELVKLLEENPNVTIELSAHTD---YIGSAEYNKRLSQRR 585 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL-------------KIASD------------- 325 A + L G+ DR++ + G+ R +D Sbjct: 586 ADAVVAYLTSHGIVRDRLTPV-GYGKERPKKIRRKLTEKYPWLKENDILTEDFIKKLDKE 644 Query: 326 ---PMNSANRRIDILVED 340 N NRR + V Sbjct: 645 KQEIANQLNRRTEFTVLR 662 >gi|323978486|gb|EGB73569.1| OmpA family protein [Escherichia coli TW10509] Length = 160 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTRARMDGHTDNY---GEDSYNEALSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 160 >gi|261251019|ref|ZP_05943593.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891] gi|260937892|gb|EEX93880.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891] Length = 305 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD S + + ++ + I+I GHTD ++ N +LSL RA + Sbjct: 62 FDFDKSELKEQDKQSIDRLISSIRKLHGQIAIVGHTD---YQGSDDYNVKLSLRRAEAVK 118 Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + + R ++ + + + N+ NRR ++ E Q Sbjct: 119 AYMQTQ-LDASRYDWEVKYYGESKPLVEGQSKQANAENRRAYVVFEQTQ 166 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 12/165 (7%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + K L + K+ ++ + + + +++ F Sbjct: 138 GESKPLVEGQSKQANAENRRAYVVFEQTQTQQENEFCAPPEPQRKVFVAMTSH-----FG 192 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + P L + L + I GHTD ++ N RL+ RA S Q Sbjct: 193 FDEAKLKPIDKTSLDEFANQLNGLNGRVLIAGHTD---YQGSISYNERLAEQRAESVLQY 249 Query: 299 LMKSGVSEDRIS-KISGFAHHRLKIASD--PMNSANRRIDILVED 340 L + ++ ++ F N+ NRR I+ ++ Sbjct: 250 LQTK-LDPNQFVWEVKSFGELNPVTQEQDLDANALNRRAFIVFKE 293 >gi|219684554|ref|ZP_03539497.1| outer membrane protein [Borrelia garinii PBr] gi|219671916|gb|EED28970.1| outer membrane protein [Borrelia garinii PBr] Length = 389 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 10/147 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I + + + + +K ++ E GI +S+ + F S L + L I Sbjct: 250 DNFIETEVENYIQEKKIKDIVVEKNNKGINLSLDIE-----FYPDSFQILQKEYKKLDLI 304 Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++L I I GHT+ + + + LS RA + L+K V G Sbjct: 305 AKLLEKFEKNNILIEGHTEQF---GLEEEMYELSEKRARTIGNYLIKMKVKNKDQILFKG 361 Query: 315 FAHHRLKIAS-DPMNSANRRIDILVED 340 + + K + P+ + NRR++I + + Sbjct: 362 WGSKKPKYPNSSPLKAKNRRVEITILN 388 >gi|330894565|gb|EGH27226.1| OmpA/MotB [Pseudomonas syringae pv. mori str. 301020] Length = 73 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 A N LS RA S L++ GV R+ + G+ + + + NRR+++ + Sbjct: 1 ASYNQSLSERRANSVRMALVRMGVDPARVVTM-GYGKEYPVADNTSNSGRAMNRRVEVTI 59 Query: 339 EDRQ 342 + Sbjct: 60 SNDN 63 >gi|329118055|ref|ZP_08246768.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200] gi|327465943|gb|EGF12215.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200] Length = 248 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 5/85 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F P+ I L + L + + + + GHTD F + N LS RA Sbjct: 90 LFGFDKDNLRPQAIDTLNDLAGRLSNENVQAVRVEGHTD---FMGSEQYNQALSERRANV 146 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 L+ GV +IS + G + Sbjct: 147 VANYLVNQGVPAGKISAV-GLGESQ 170 >gi|294139759|ref|YP_003555737.1| OmpA family protein [Shewanella violacea DSS12] gi|293326228|dbj|BAJ00959.1| OmpA family protein [Shewanella violacea DSS12] Length = 361 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 8/147 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 ++ + + V + + F +SS E+ + Sbjct: 206 DSDNDGVADDMDQCADTSANHQVDANGCTVYTETTEQRDVGSIQFANNSSAVKTESFERI 265 Query: 253 QKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 +K+ + + + I GH A N LS RA + ++L++ G+S+DR+ Sbjct: 266 EKLATYMNTNPKSTVLISGHASNV---GKADYNMILSDKRAKAVAKILVEKFGISQDRVE 322 Query: 311 KISGFAHHRLKIASDPMNS--ANRRID 335 GF + I + + ANRRI+ Sbjct: 323 A-KGFGVTQPIIQGRSVEANKANRRIE 348 >gi|113868784|ref|YP_727273.1| outer membrane protein or related peptidoglycan-associated (lipo)protein [Ralstonia eutropha H16] gi|113527560|emb|CAJ93905.1| outer membrane protein or related peptidoglycan-associated (lipo)protein [Ralstonia eutropha H16] Length = 168 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + + FD S + +L + + L + I+G+TD + N L Sbjct: 63 KRSVYFDFDSYTVKSDYQGMLGEHAKYLGSNKGRKILIQGNTDER---GTSEYNLALGQK 119 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 RA + + L GV + ++ +S + K + + NRR DI Sbjct: 120 RAEAVRRSLASMGVPDGQMEAVS-LGKEKPKATGHDEASWAENRRADI 166 >gi|260779147|ref|ZP_05888039.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio coralliilyticus ATCC BAA-450] gi|260605311|gb|EEX31606.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio coralliilyticus ATCC BAA-450] Length = 179 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + T F ++ + +L L+ + ++I GH D N L Sbjct: 73 ESQTIYFAFDNATIAGDYEEMLAAHAAYLSKNPALKVTIEGHADER---GTPEYNIALGE 129 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV D+IS +S + + + + + NRR ++ Sbjct: 130 RRATAVAKYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 178 >gi|210135015|ref|YP_002301454.1| flagellar motor protein MotB [Helicobacter pylori P12] gi|210132983|gb|ACJ07974.1| flagellar motor rotation protein MotB [Helicobacter pylori P12] Length = 257 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 84/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G S++ ++ +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SVLKLPSSLLFENATSDAINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|163793574|ref|ZP_02187549.1| OmpA/MotB [alpha proteobacterium BAL199] gi|159181376|gb|EDP65891.1| OmpA/MotB [alpha proteobacterium BAL199] Length = 293 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ ++ PE+ L + E++ + I GHTD + N L+L RA Sbjct: 192 FEVGGNVLTPESQASLPTLLEIIRQRVLPGVEIAGHTDRV---GASSVNDALALRRAELV 248 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 Q+++ G+S R+ ++ F + + NRR++I V Sbjct: 249 QQMMLDLGISR-RLIRVDSFGERDPVVPTADGVDEPRNRRVEITVR 293 >gi|225350130|gb|ACN87975.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 70/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLELSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|145297581|ref|YP_001140422.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida A449] gi|142850353|gb|ABO88674.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida A449] Length = 343 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 17/121 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + + PE L + + + V ++ G+TD N RLS Sbjct: 221 SDVLFDFNKATLKPEGGQALDTLYGEIEAARPTDGVATVIGYTDRI---GSDAYNQRLSE 277 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSA---------NRRIDILVE 339 RA + L+ G+ +++ + G S +RR+++ VE Sbjct: 278 QRAQTVADYLVGKGLPAGKVN-VEGRGKGSPVTGDSCTSKSKHELIVCLAPDRRVEVKVE 336 Query: 340 D 340 Sbjct: 337 G 337 >gi|66047081|ref|YP_236922.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] gi|63257788|gb|AAY38884.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] Length = 386 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 82/271 (30%), Gaps = 11/271 (4%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 ++ A+ G + + S+ + K +T Sbjct: 20 QTPQSDSAATGGHWWQFGSGSESADAGTAAKAPAPSPAPAPVAKAAATPPPATGAENSAP 79 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ S S K D K S + + + + S + Sbjct: 80 WYWPFGSSDSAQAKPDAVADKPAAKPAAPSMVAKSETDTKWWWPFGNDSAKDEPKALPMP 139 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249 + + L A E + I+ F+ L P T+ Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196 Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + ++ +V+ + I GH D N ++S +RA S + SG+ +R Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPTDANQKISQERAQSVAAIFRLSGLERNR 253 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337 +S+ G + A+D + NRR++IL Sbjct: 254 LSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 283 >gi|73540500|ref|YP_295020.1| OmpA/MotB [Ralstonia eutropha JMP134] gi|72117913|gb|AAZ60176.1| OmpA/MotB [Ralstonia eutropha JMP134] Length = 170 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + + FD S PE +L + + L + I+G+TD + N L Sbjct: 65 KRSVYFDFDSYSVKPEYQSMLGEHAKYLGSNKGRKILIQGNTDER---GTSEYNLALGQK 121 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 RA + + L GVS+ ++ +S + K + + NRR DI Sbjct: 122 RAEAVRRSLATMGVSDSQMEAVS-LGKEKPKSTGHDEAAWAENRRADI 168 >gi|189353747|ref|YP_001949374.1| putative OmpA family transmembrane protein [Burkholderia multivorans ATCC 17616] gi|189337769|dbj|BAG46838.1| putative OmpA family transmembrane protein [Burkholderia multivorans ATCC 17616] Length = 266 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 17/119 (14%) Query: 233 NTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRL 287 +F + S P L + I + GHTD N L Sbjct: 148 GEALFPFAKSSLDSMLPGGRAELDDAIAKIRAERGTTRIDVVGHTDRI---GSDESNRAL 204 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILV 338 S RA + + L+ G+ RI + G + P +RR+ I V Sbjct: 205 SRARAETVKRYLVAHGLDAARI-RTEGAGSSQPVSHCPPGESPAVIACLQKDRRVTITV 262 >gi|330977950|gb|EGH77853.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 378 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 82/271 (30%), Gaps = 11/271 (4%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 ++ A+ G + + S+ + K +T Sbjct: 20 QTPQSDSAATGGHWWQFGSGSESADAGTAAKAPAPSPAPAPVAKAAATPAPAAGAENSAP 79 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ S + K D K + + + + + S + Sbjct: 80 WYWPFGSNDNAQAKPDAVADKPAAKPAAPAMVAKSETDTKWWWPFGNDSSKDEPKALAMP 139 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249 + + L A E + I+ F+ L P T+ Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196 Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + ++ +V+ + I GH D N ++S +RA S + SG+ +R Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRLSGLERNR 253 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337 +S+ G + A+D + NRR++IL Sbjct: 254 LSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 283 >gi|320538522|ref|ZP_08038383.1| OmpA family protein [Treponema phagedenis F0421] gi|320144629|gb|EFW36384.1| OmpA family protein [Treponema phagedenis F0421] Length = 1347 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 52/132 (39%), Gaps = 9/132 (6%) Query: 215 VLFETTRTGILI---SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRG 270 VL + I SII ++N P F + + + VL++I ++L + + G Sbjct: 1215 VLIIRDGNRLKIAVPSIIFRKNEPDFQDLPQATVNKNLQVLKRIAQILNKFPDYKIRVEG 1274 Query: 271 H--TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDP 326 H T R LS RA + Q L+++GV R++ G Sbjct: 1275 HANTTTGTLREEREYLLPLSEKRAEAIRQYLIENGVRASRLTA-EGKGGTEPVADFTDRN 1333 Query: 327 MNSANRRIDILV 338 NRR++ ++ Sbjct: 1334 NWWKNRRVEFIL 1345 >gi|161525757|ref|YP_001580769.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC 17616] gi|160343186|gb|ABX16272.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC 17616] Length = 176 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E +LQ+ + L + + I+G+TD + N L RA + Sbjct: 74 FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 130 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV++ ++ +S + + + + NRR D++ Sbjct: 131 RRALALLGVADSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 173 >gi|183219622|ref|YP_001837618.1| flagellar motor protein MotB [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909761|ref|YP_001961316.1| flagellar motor protein MotB [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774437|gb|ABZ92738.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778044|gb|ABZ96342.1| Chemotaxis MotB protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 277 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 75/212 (35%), Gaps = 18/212 (8%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 + ++ + KST + + + +I ++ + ++L+K Sbjct: 41 KTDAKEMQIILSAFKSTTGFFTGGQTLSKGSLEEMGMQIESLPSQVVGRNLSKSKKDAQE 100 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 + V G++IS+ F S+I P L+K ++ Sbjct: 101 VFKPEVEAGKVRISENERGLVISL---VGADYFYPGSAILTPAIRETLRKAAGLIKGLER 157 Query: 265 VISIRGHTD-------ASPFRNIARD--NWRLSLDRA-YSAYQVLMKSGVSEDRISKISG 314 + + GH+D + P R NW L+ RA + ++ + +S Sbjct: 158 FVRVEGHSDDDAVNPVSRPGREEREYINNWDLAGARAVNATVFMINAEEIEPSWFQAVS- 216 Query: 315 FAHHRLKI-ASD-PMNSA--NRRIDILVEDRQ 342 F +R + ++ + NRR+DI++ + Sbjct: 217 FGSYRPLVLENEGTPEAKAFNRRVDIIILTEK 248 Score = 59.2 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 33/96 (34%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + + + Y D +T+L+ FF++++ TD + I F Sbjct: 4 KKEKCPECIQKVPEFMATYGDMVTLLLCFFILLYTTGKTDAKEMQIILSAFKSTTGFFTG 63 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 ++ + +++K+ D + Sbjct: 64 GQTLSKGSLEEMGMQIESLPSQVVGRNLSKSKKDAQ 99 >gi|28898885|ref|NP_798490.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus RIMD 2210633] gi|1170999|sp|P46233|MOTY_VIBPA RecName: Full=Sodium-type flagellar protein motY; Flags: Precursor gi|497129|gb|AAA21574.1| MotY [Vibrio parahaemolyticus] gi|28807104|dbj|BAC60374.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus RIMD 2210633] gi|328474556|gb|EGF45361.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus 10329] Length = 293 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 62/158 (39%), Gaps = 10/158 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 + Q ++I LS ++ + + S D T + +++ + Sbjct: 140 QDWQSRDQRIEVALSSVLFQ-SKYNAFSDCIANLLKYSFEDIAFTILHYERQGDQLTKAS 198 Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L +I + + H+ ++ + +TD++ ++ ++ LS RA S G+ E Sbjct: 199 KKRLAQIADYVRHNQDIDLVLVATYTDSTDGKSESQS---LSERRAESLRTYFESLGLPE 255 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 DRI ++ G+ R + NRR+ I + Q Sbjct: 256 DRI-QVQGYGKRRPIADNGTPIGKDKNRRVVISLGRTQ 292 >gi|114330317|ref|YP_746539.1| OmpA/MotB domain-containing protein [Nitrosomonas eutropha C91] gi|114307331|gb|ABI58574.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91] Length = 173 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 R + FD S E ++ L + + ++G+TD N L Sbjct: 63 SRRSVYFDFDSYTVKGEYRDLVLAHAAYLRDNLNAQVLLQGNTDER---GSREYNLALGQ 119 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA S +L+ SG + ++ +S + + + + + NRR DIL Sbjct: 120 RRANSVKDILLLSGARDQQVEAVS-LGEEKPRALGSDESSWAENRRTDIL 168 >gi|261493427|ref|ZP_05989952.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261310921|gb|EEY12099.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 153 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 8/109 (7%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 + Q NT F S E +L ++LA + ++I GH D N Sbjct: 46 QLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADER---GTPEYNIA 102 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 L RA + L G + + + + + + NRR Sbjct: 103 LGQRRADAVKGYLAAKGANN---TSTVSYGEEKPAVLGHSEADYAKNRR 148 >gi|261496884|ref|ZP_05993252.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307408|gb|EEY08743.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia haemolytica serotype A2 str. OVINE] Length = 157 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 8/109 (7%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 + Q NT F S E +L ++LA + ++I GH D N Sbjct: 50 QLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADER---GTPEYNIA 106 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 L RA + L G + + + + + + NRR Sbjct: 107 LGQRRADAVKGYLAAKGANN---TSTVSYGEEKPAVLGHSEADYAKNRR 152 >gi|269123033|ref|YP_003305610.1| OmpA/MotB domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268314359|gb|ACZ00733.1| OmpA/MotB domain protein [Streptobacillus moniliformis DSM 12112] Length = 367 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 47/139 (33%), Gaps = 10/139 (7%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + L + +L I + FD E ++ + L Sbjct: 237 IRELENKIEMLTMLINNMDKNRDKEIKEIYFISGFDSGKFTLKQEHKNIIDSLISGLKDK 296 Query: 263 TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I + G+TD + N L L+RA S L GV ++ + + L Sbjct: 297 E--IIVVGYTDTD---GTDKYNLNLGLNRAKSVKIYLENKGV---KVKETRSAGFNELIR 348 Query: 323 ASDPMN--SANRRIDILVE 339 + + NRR++I+V+ Sbjct: 349 DNKTSENKALNRRVEIMVK 367 >gi|167950585|ref|ZP_02537659.1| OmpA/MotB [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 83 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 R A N LS RA + L GV RI ++ G + + + NRR+ Sbjct: 4 IRGTAEYNQHLSERRAENVAYFLEDQGVPAARI-RVEGRGRSEPRASHETEGDRQLNRRV 62 Query: 335 DILVE 339 +I V Sbjct: 63 EIYVR 67 >gi|254360704|ref|ZP_04976852.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia haemolytica PHL213] gi|153091274|gb|EDN73248.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia haemolytica PHL213] Length = 161 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 8/109 (7%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 + Q NT F S E +L ++LA + ++I GH D N Sbjct: 54 QLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADER---GTPEYNIA 110 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 L RA + L G + + + + + + NRR Sbjct: 111 LGQRRADAVKGYLAAKGANN---TSTVSYGEEKPAVLGHSEADYAKNRR 156 >gi|330989073|gb|EGH87176.1| OmpA/MotB [Pseudomonas syringae pv. lachrymans str. M301315] Length = 831 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 84/294 (28%), Gaps = 19/294 (6%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 +E + +T S + +R++ ++ + + ++ + + + Sbjct: 540 FARLESVMLKPTADNLTRSLYLLSSIKIYQRNAPTLTTVTGIDSVEPRALPVDNRAQSVA 599 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + LS +Q+ + L + Sbjct: 600 TFGKTTLDTYLMLSKAQREQADPAVLKARIPDYWYPAIYKQAPHDTGMSAQAAGEVDDYQ 659 Query: 182 KILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 Q + L+ + + + +++ I I + +F Sbjct: 660 FAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETITLESDTLFAFG 719 Query: 241 SSIPLP---ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + L I L ++ I I GH D A+ N ++S RA + Sbjct: 720 RADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQI---GDAQSNLQVSKQRAQTI 776 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340 L+ G+ + + + G ++ + D NRR++I V Sbjct: 777 KTYLVGKGLPSELVDAV-GEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEVRA 829 >gi|126173976|ref|YP_001050125.1| OmpA domain-containing protein [Shewanella baltica OS155] gi|153000268|ref|YP_001365949.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS185] gi|160874901|ref|YP_001554217.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS195] gi|304409845|ref|ZP_07391465.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS183] gi|307304201|ref|ZP_07583954.1| peptidoglycan-associated lipoprotein [Shewanella baltica BA175] gi|125997181|gb|ABN61256.1| OmpA domain protein [Shewanella baltica OS155] gi|151364886|gb|ABS07886.1| Peptidoglycan-associated lipoprotein [Shewanella baltica OS185] gi|160860423|gb|ABX48957.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS195] gi|304352363|gb|EFM16761.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS183] gi|306913099|gb|EFN43522.1| peptidoglycan-associated lipoprotein [Shewanella baltica BA175] gi|315267138|gb|ADT93991.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS678] Length = 178 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 +++ FD S + +L+ G L V I GH D N L Sbjct: 72 KQHIIYFDFDRSEVQTDFAAILEAHGTYLVEHPSVRVLIEGHADER---GTPEYNIALGE 128 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV ++ + + + S NRR ++ Sbjct: 129 RRAKAVAKYLQGMGVQPSQM-SVVSYGEEKPLDFSRTDEGFGKNRRAVLV 177 >gi|50235065|gb|AAT70735.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + +R +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDRDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDGDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + ++ F+ + + PE+ L Sbjct: 215 TDNDGVLDKDDKCPTVPGLPQYDGCPKPQSAFAAEATGALQGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|288927607|ref|ZP_06421454.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108] gi|288330441|gb|EFC69025.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108] Length = 676 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 34/145 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I+ + +D PE+ L ++ ++L + I + H D +R N Sbjct: 502 ITAPVLIDNIFYDLDKYTLRPESKQALDELVKLLNENPNVTIELSAHCD---YRGTPEYN 558 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMN-------------- 328 LS RA + Q L+ +G++ R++ + G+ + Sbjct: 559 KVLSQHRANAVVQYLIDAGIAPQRLTPV-GYGKEKPKTIRKKLTERYKWLKEGDVLTEDF 617 Query: 329 -------------SANRRIDILVED 340 NRR + +V+ Sbjct: 618 ITKLDKDKQEICNQLNRRTEFVVQR 642 >gi|169839536|ref|ZP_02872724.1| OmpA/MotB domain protein [candidate division TM7 single-cell isolate TM7a] Length = 172 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 8/106 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F I I L++I +L E ++ GHTD++ + N +LSL RA + Sbjct: 60 FKVDGKIINENEISELKEIVSILNEFGESGTVDFIGHTDST---GTKKYNQKLSLTRARN 116 Query: 295 AYQVLMKSGV-SEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 A ++ + G+ I +ISG ++ NRR++IL Sbjct: 117 AARLFREFGLKDAISIGEISGKGEEDPVDLNETDQGKYINRRVEIL 162 >gi|332520207|ref|ZP_08396671.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332044766|gb|EGI80960.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 648 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 13/115 (11%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 N FD + V L+KI + + + + +R HTD+ N + N LS R Sbjct: 536 NIIYFDLDKHYIRQDAEVELRKIIDFMNVYSNIKIDVRSHTDSR---NTSEYNLDLSNRR 592 Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 A + L+ G++ R+ G+ +L+ S+ + NRR + ++ Sbjct: 593 AQATIDYLVNVGGINRARL-TGKGYGELQLRNRCGDGVPCSESEHQLNRRSEFII 646 >gi|39937736|ref|NP_950012.1| outer membrane protein OprF [Rhodopseudomonas palustris CGA009] gi|39651596|emb|CAE30118.1| possible outer membrane protein OprF (AF117972) [Rhodopseudomonas palustris CGA009] Length = 216 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 71/201 (35%), Gaps = 15/201 (7%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + S + +++ + + + A + + + + Sbjct: 22 AAFPLGVASAGEVTSDQIVRALTPNKPLTRSLSAAQPAAATVDPTQAKFVDSLRNRPTRS 81 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-- 263 L + + + I + I F+ +S+ + ++ +G+ L+ Sbjct: 82 LSSGERTQIAEITKDKPNIDLEIT-------FEYNSANISRQAAPAVEALGKALSSPDLK 134 Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK 321 + GHTD+ N LS RA + +VL++ G++ + + G+ RLK Sbjct: 135 GGTFVVAGHTDSV---GSDSFNQDLSERRADTIKRVLVEKYGIAGADLVTV-GYGESRLK 190 Query: 322 IASDPMNSANRRIDILVEDRQ 342 + P + NRR+ ++ Q Sbjct: 191 DPAHPDSGINRRVQVVNMSDQ 211 >gi|89069954|ref|ZP_01157287.1| OmpA domain protein [Oceanicola granulosus HTCC2516] gi|89044508|gb|EAR50636.1| OmpA domain protein [Oceanicola granulosus HTCC2516] Length = 298 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ P + L + LA + + GHTD+ N LS RA Sbjct: 193 FETGSARLGPGSFASLDALARYLAAAPARRVVLVGHTDSQ---GSLAGNISLSRRRADQV 249 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L+ + G +++ G + ++ NRR++ ++ + Sbjct: 250 RTRLIAEHGTDPAQLTA-DGVGYLAPVASNLTPEGREANRRVEAVLVSTE 298 >gi|50235075|gb|AAT70740.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 74/268 (27%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T + ++ + + + Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGSPWPDS--------------- 215 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + ++ F + S PE+ L Sbjct: 216 -DNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGALQGIFFHFNKSSIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GVS ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|27366370|ref|NP_761898.1| sodium-type flagellar protein motY [Vibrio vulnificus CMCP6] gi|27362571|gb|AAO11425.1| Sodium-type flagellar protein motY precursor [Vibrio vulnificus CMCP6] Length = 293 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 56/159 (35%), Gaps = 8/159 (5%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + R Q + +S+ L + V + IS ++++ Sbjct: 140 QDWQSRDQRIEVALSAVLFQQKYNVFSDCVANLLPYSFEDISFTILH----YERNGDKLT 195 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L +I E + +++++ + T + LS RA S G++ Sbjct: 196 KASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVS-QNLSERRAESLRDYFKALGLT 254 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 EDRI ++ G+ R + NRR+ I + + Sbjct: 255 EDRI-QVQGYGKRRPIADNATPIGKDKNRRVVISLGRSE 292 >gi|238785870|ref|ZP_04629838.1| Peptidoglycan-associated lipoprotein [Yersinia bercovieri ATCC 43970] gi|238713240|gb|EEQ05284.1| Peptidoglycan-associated lipoprotein [Yersinia bercovieri ATCC 43970] Length = 168 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277 + + + + + N F + +L L + + GH D Sbjct: 50 EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 107 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA + L GVS D+IS +S + + + + NRR Sbjct: 108 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 165 Query: 336 IL 337 ++ Sbjct: 166 LV 167 >gi|296410002|gb|ADH15777.1| OmpP6 [Haemophilus haemolyticus] Length = 144 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 + + NT F E + +L L + + + G+TD N Sbjct: 39 LQQRYNTVYFGFDKYNIEGEYVQILDAHAAYLNATPAAKVLVEGNTDER---GTPEYNIA 95 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333 L RA + L GV ++ +S + + + + NRR Sbjct: 96 LGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNRR 143 >gi|259090547|gb|ACV91896.1| OprL [Pseudomonas fluorescens] gi|259090549|gb|ACV91897.1| OprL [Pseudomonas fluorescens] gi|259090551|gb|ACV91898.1| OprL [Pseudomonas fluorescens] gi|259090557|gb|ACV91901.1| OprL [Pseudomonas fluorescens] gi|259090559|gb|ACV91902.1| OprL [Pseudomonas fluorescens] gi|259090563|gb|ACV91904.1| OprL [Pseudomonas fluorescens] gi|259090565|gb|ACV91905.1| OprL [Pseudomonas fluorescens] gi|259090567|gb|ACV91906.1| OprL [Pseudomonas fluorescens] gi|259090569|gb|ACV91907.1| OprL [Pseudomonas fluorescens] gi|259090571|gb|ACV91908.1| OprL [Pseudomonas fluorescens] gi|259090585|gb|ACV91915.1| OprL [Pseudomonas fluorescens] gi|259090587|gb|ACV91916.1| OprL [Pseudomonas fluorescens] Length = 157 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 4/89 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TDA N L RA + Sbjct: 67 FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDAR---GTREYNMALGERRAKAVQ 123 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASD 325 + L+ GV+ ++ +S + R + Sbjct: 124 RYLVLQGVAPGQLELVS-YGKERPVATGN 151 >gi|163748690|ref|ZP_02155943.1| OmpA family protein [Shewanella benthica KT99] gi|161331800|gb|EDQ02604.1| OmpA family protein [Shewanella benthica KT99] Length = 199 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S P ++ I + +I GH + + N LS +RA + Sbjct: 76 LFANDSYYIAPLHYDQVEVIASFMNEFKNTKVTIEGHCSKT---GSYQHNLSLSQNRADA 132 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 +L + ++ DR+ I G+++ R S + NRR+ Sbjct: 133 VTSLLTERFSIAPDRLIAI-GYSYDRPVDESGTHRAQTRNRRV 174 >gi|82776019|ref|YP_402366.1| peptidoglycan-associated outer membrane lipoprotein [Shigella dysenteriae Sd197] gi|309786420|ref|ZP_07681046.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae 1617] gi|81240167|gb|ABB60877.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae Sd197] gi|308925814|gb|EFP71295.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae 1617] Length = 173 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 68 NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 172 >gi|15800457|ref|NP_286469.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O157:H7 EDL933] gi|15830030|ref|NP_308803.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O157:H7 str. Sakai] gi|16128716|ref|NP_415269.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli str. K-12 substr. MG1655] gi|30062096|ref|NP_836267.1| peptidoglycan-associated outer membrane lipoprotein [Shigella flexneri 2a str. 2457T] gi|56479690|ref|NP_706493.2| peptidoglycan-associated outer membrane lipoprotein [Shigella flexneri 2a str. 301] gi|74311265|ref|YP_309684.1| peptidoglycan-associated outer membrane lipoprotein [Shigella sonnei Ss046] gi|82543168|ref|YP_407115.1| peptidoglycan-associated outer membrane lipoprotein [Shigella boydii Sb227] gi|89107599|ref|AP_001379.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli str. K-12 substr. W3110] gi|110804633|ref|YP_688153.1| peptidoglycan-associated outer membrane lipoprotein [Shigella flexneri 5 str. 8401] gi|157157682|ref|YP_001461902.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli E24377A] gi|157160223|ref|YP_001457541.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli HS] gi|170020914|ref|YP_001725868.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli ATCC 8739] gi|170080408|ref|YP_001729728.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli str. K-12 substr. DH10B] gi|170683065|ref|YP_001742852.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli SMS-3-5] gi|187731438|ref|YP_001879398.1| peptidoglycan-associated outer membrane lipoprotein [Shigella boydii CDC 3083-94] gi|188492398|ref|ZP_02999668.1| peptidoglycan-associated lipoprotein [Escherichia coli 53638] gi|189010018|ref|ZP_02804243.2| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC4076] gi|189402679|ref|ZP_02784049.2| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC4401] gi|189402925|ref|ZP_03006899.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC4486] gi|189404924|ref|ZP_02811914.2| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC869] gi|194430753|ref|ZP_03063168.1| peptidoglycan-associated lipoprotein [Escherichia coli B171] gi|194440229|ref|ZP_03072261.1| peptidoglycan-associated lipoprotein [Escherichia coli 101-1] gi|195936736|ref|ZP_03082118.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O157:H7 str. EC4024] gi|208815415|ref|ZP_03256594.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC4045] gi|208822195|ref|ZP_03262514.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC4042] gi|209396423|ref|YP_002269375.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC4115] gi|209917992|ref|YP_002292076.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli SE11] gi|217326423|ref|ZP_03442507.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. TW14588] gi|218553268|ref|YP_002386181.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli IAI1] gi|218694165|ref|YP_002401832.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli 55989] gi|218699113|ref|YP_002406742.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli IAI39] gi|218704068|ref|YP_002411587.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli UMN026] gi|238900006|ref|YP_002925802.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli BW2952] gi|253774288|ref|YP_003037119.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160811|ref|YP_003043919.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli B str. REL606] gi|254791898|ref|YP_003076735.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O157:H7 str. TW14359] gi|256021183|ref|ZP_05435048.1| peptidoglycan-associated outer membrane lipoprotein [Shigella sp. D9] gi|256023656|ref|ZP_05437521.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia sp. 4_1_40B] gi|260842947|ref|YP_003220725.1| peptidoglycan-associated outer membrane lipoprotein Pal [Escherichia coli O103:H2 str. 12009] gi|260853976|ref|YP_003227867.1| peptidoglycan-associated outer membrane lipoprotein Pal [Escherichia coli O26:H11 str. 11368] gi|260866872|ref|YP_003233274.1| peptidoglycan-associated outer membrane lipoprotein Pal [Escherichia coli O111:H- str. 11128] gi|261224452|ref|ZP_05938733.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O157:H7 str. FRIK2000] gi|261254556|ref|ZP_05947089.1| peptidoglycan-associated outer membrane lipoprotein Pal [Escherichia coli O157:H7 str. FRIK966] gi|291281684|ref|YP_003498502.1| Peptidoglycan-associated lipoprotein precursor [Escherichia coli O55:H7 str. CB9615] gi|293403996|ref|ZP_06647990.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli FVEC1412] gi|293409125|ref|ZP_06652701.1| conserved hypothetical protein [Escherichia coli B354] gi|293414026|ref|ZP_06656675.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli B185] gi|293433009|ref|ZP_06661437.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli B088] gi|297520454|ref|ZP_06938840.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli OP50] gi|298379776|ref|ZP_06989381.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli FVEC1302] gi|300816391|ref|ZP_07096613.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 107-1] gi|300822970|ref|ZP_07103105.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 119-7] gi|300900748|ref|ZP_07118897.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 198-1] gi|300907000|ref|ZP_07124669.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 84-1] gi|300918402|ref|ZP_07135002.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 115-1] gi|300926145|ref|ZP_07141958.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 182-1] gi|300929453|ref|ZP_07144921.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 187-1] gi|300937786|ref|ZP_07152583.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 21-1] gi|300947178|ref|ZP_07161388.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 116-1] gi|300957690|ref|ZP_07169879.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 175-1] gi|301020787|ref|ZP_07184851.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 69-1] gi|301027077|ref|ZP_07190449.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 196-1] gi|301305229|ref|ZP_07211327.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 124-1] gi|301327934|ref|ZP_07221105.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 78-1] gi|301648046|ref|ZP_07247813.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 146-1] gi|307137354|ref|ZP_07496710.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli H736] gi|307314794|ref|ZP_07594388.1| peptidoglycan-associated lipoprotein [Escherichia coli W] gi|309797456|ref|ZP_07691848.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 145-7] gi|312970820|ref|ZP_07784999.1| peptidoglycan-associated lipoprotein [Escherichia coli 1827-70] gi|331662101|ref|ZP_08363024.1| peptidoglycan-associated lipoprotein [Escherichia coli TA143] gi|331667108|ref|ZP_08367973.1| peptidoglycan-associated lipoprotein [Escherichia coli TA271] gi|71159616|sp|P0A913|PAL_ECO57 RecName: Full=Peptidoglycan-associated lipoprotein; Flags: Precursor gi|71159617|sp|P0A912|PAL_ECOLI RecName: Full=Peptidoglycan-associated lipoprotein; Flags: Precursor gi|71159618|sp|P0A914|PAL_SHIFL RecName: Full=Peptidoglycan-associated lipoprotein; Flags: Precursor gi|12513674|gb|AAG55077.1|AE005252_13 peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EDL933] gi|41360|emb|CAA46673.1| peptidoglycan-associated lipoprotein [Escherichia coli K-12] gi|42257|emb|CAA28771.1| unnamed protein product [Escherichia coli K-12] gi|1651333|dbj|BAA35407.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli str. K12 substr. W3110] gi|1786962|gb|AAC73835.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli str. K-12 substr. MG1655] gi|13360235|dbj|BAB34199.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. Sakai] gi|30040340|gb|AAP16073.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2a str. 2457T] gi|56383241|gb|AAN42200.2| peptidoglycan-associated lipoprotein [Shigella flexneri 2a str. 301] gi|73854742|gb|AAZ87449.1| peptidoglycan-associated lipoprotein [Shigella sonnei Ss046] gi|81244579|gb|ABB65287.1| peptidoglycan-associated lipoprotein [Shigella boydii Sb227] gi|110614181|gb|ABF02848.1| peptidoglycan-associated lipoprotein [Shigella flexneri 5 str. 8401] gi|157065903|gb|ABV05158.1| peptidoglycan-associated lipoprotein [Escherichia coli HS] gi|157079712|gb|ABV19420.1| peptidoglycan-associated lipoprotein [Escherichia coli E24377A] gi|169755842|gb|ACA78541.1| peptidoglycan-associated lipoprotein [Escherichia coli ATCC 8739] gi|169888243|gb|ACB01950.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli str. K-12 substr. DH10B] gi|170520783|gb|ACB18961.1| peptidoglycan-associated lipoprotein [Escherichia coli SMS-3-5] gi|187428430|gb|ACD07704.1| peptidoglycan-associated lipoprotein [Shigella boydii CDC 3083-94] gi|188487597|gb|EDU62700.1| peptidoglycan-associated lipoprotein [Escherichia coli 53638] gi|189002834|gb|EDU71820.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC4076] gi|189354292|gb|EDU72711.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC4401] gi|189363387|gb|EDU81806.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC4486] gi|189373170|gb|EDU91586.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC869] gi|194411203|gb|EDX27610.1| peptidoglycan-associated lipoprotein [Escherichia coli B171] gi|194420838|gb|EDX36893.1| peptidoglycan-associated lipoprotein [Escherichia coli 101-1] gi|208732063|gb|EDZ80751.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC4045] gi|208737680|gb|EDZ85363.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC4042] gi|209157823|gb|ACI35256.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. EC4115] gi|209776378|gb|ACI86501.1| peptidoglycan-associated lipoprotein [Escherichia coli] gi|209776380|gb|ACI86502.1| peptidoglycan-associated lipoprotein [Escherichia coli] gi|209776382|gb|ACI86503.1| peptidoglycan-associated lipoprotein [Escherichia coli] gi|209776384|gb|ACI86504.1| peptidoglycan-associated lipoprotein [Escherichia coli] gi|209776386|gb|ACI86505.1| peptidoglycan-associated lipoprotein [Escherichia coli] gi|209911251|dbj|BAG76325.1| peptidoglycan-associated lipoprotein [Escherichia coli SE11] gi|217322644|gb|EEC31068.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str. TW14588] gi|218350897|emb|CAU96595.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli 55989] gi|218360036|emb|CAQ97583.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli IAI1] gi|218369099|emb|CAR16853.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli IAI39] gi|218431165|emb|CAR12041.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli UMN026] gi|238861988|gb|ACR63986.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli BW2952] gi|242376503|emb|CAQ31207.1| pal, subunit of The Tol-Pal Cell Envelope Complex, Colicin S4 Transport System and The Colicin A Import System [Escherichia coli BL21(DE3)] gi|253325332|gb|ACT29934.1| peptidoglycan-associated lipoprotein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972712|gb|ACT38383.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli B str. REL606] gi|253976906|gb|ACT42576.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli BL21(DE3)] gi|254591298|gb|ACT70659.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O157:H7 str. TW14359] gi|257752625|dbj|BAI24127.1| peptidoglycan-associated outer membrane lipoprotein Pal [Escherichia coli O26:H11 str. 11368] gi|257758094|dbj|BAI29591.1| peptidoglycan-associated outer membrane lipoprotein Pal [Escherichia coli O103:H2 str. 12009] gi|257763228|dbj|BAI34723.1| peptidoglycan-associated outer membrane lipoprotein Pal [Escherichia coli O111:H- str. 11128] gi|260450105|gb|ACX40527.1| peptidoglycan-associated lipoprotein [Escherichia coli DH1] gi|281599943|gb|ADA72927.1| Peptidoglycan-associated lipoprotein precursor [Shigella flexneri 2002017] gi|284920528|emb|CBG33590.1| peptidoglycan-associated lipoprotein [Escherichia coli 042] gi|290761557|gb|ADD55518.1| Peptidoglycan-associated lipoprotein precursor [Escherichia coli O55:H7 str. CB9615] gi|291323828|gb|EFE63250.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli B088] gi|291428582|gb|EFF01607.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli FVEC1412] gi|291434084|gb|EFF07057.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli B185] gi|291469593|gb|EFF12077.1| conserved hypothetical protein [Escherichia coli B354] gi|298279474|gb|EFI20982.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli FVEC1302] gi|299879411|gb|EFI87622.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 196-1] gi|300315608|gb|EFJ65392.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 175-1] gi|300355807|gb|EFJ71677.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 198-1] gi|300398433|gb|EFJ81971.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 69-1] gi|300401221|gb|EFJ84759.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 84-1] gi|300414465|gb|EFJ97775.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 115-1] gi|300417844|gb|EFK01155.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 182-1] gi|300453164|gb|EFK16784.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 116-1] gi|300457197|gb|EFK20690.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 21-1] gi|300462562|gb|EFK26055.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 187-1] gi|300524511|gb|EFK45580.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 119-7] gi|300531081|gb|EFK52143.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 107-1] gi|300839541|gb|EFK67301.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 124-1] gi|300845577|gb|EFK73337.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 78-1] gi|301073872|gb|EFK88678.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 146-1] gi|306905692|gb|EFN36220.1| peptidoglycan-associated lipoprotein [Escherichia coli W] gi|308118980|gb|EFO56242.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 145-7] gi|309700963|emb|CBJ00260.1| peptidoglycan-associated lipoprotein [Escherichia coli ETEC H10407] gi|310336581|gb|EFQ01748.1| peptidoglycan-associated lipoprotein [Escherichia coli 1827-70] gi|313649616|gb|EFS14040.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2a str. 2457T] gi|315059984|gb|ADT74311.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli W] gi|315135398|dbj|BAJ42557.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli DH1] gi|315257660|gb|EFU37628.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 85-1] gi|315614617|gb|EFU95259.1| peptidoglycan-associated lipoprotein [Escherichia coli 3431] gi|320172956|gb|EFW48184.1| 18K peptidoglycan-associated outer membrane lipoprotein [Shigella dysenteriae CDC 74-1112] gi|320179418|gb|EFW54375.1| 18K peptidoglycan-associated outer membrane lipoprotein [Shigella boydii ATCC 9905] gi|320183982|gb|EFW58806.1| 18K peptidoglycan-associated outer membrane lipoprotein [Shigella flexneri CDC 796-83] gi|320193146|gb|EFW67786.1| 18K peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O157:H7 str. EC1212] gi|320198139|gb|EFW72743.1| 18K peptidoglycan-associated outer membrane lipoprotein [Escherichia coli EC4100B] gi|320637999|gb|EFX07768.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O157:H7 str. G5101] gi|320643395|gb|EFX12575.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O157:H- str. 493-89] gi|320648689|gb|EFX17325.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O157:H- str. H 2687] gi|320654327|gb|EFX22380.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659959|gb|EFX27501.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O55:H7 str. USDA 5905] gi|320664785|gb|EFX31923.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O157:H7 str. LSU-61] gi|323153743|gb|EFZ39990.1| peptidoglycan-associated lipoprotein [Escherichia coli EPECa14] gi|323158793|gb|EFZ44806.1| peptidoglycan-associated lipoprotein [Escherichia coli E128010] gi|323163900|gb|EFZ49710.1| peptidoglycan-associated lipoprotein [Shigella sonnei 53G] gi|323170862|gb|EFZ56512.1| peptidoglycan-associated lipoprotein [Escherichia coli LT-68] gi|323180019|gb|EFZ65575.1| peptidoglycan-associated lipoprotein [Escherichia coli 1180] gi|323185098|gb|EFZ70464.1| peptidoglycan-associated lipoprotein [Escherichia coli 1357] gi|323379456|gb|ADX51724.1| peptidoglycan-associated lipoprotein [Escherichia coli KO11] gi|323938280|gb|EGB34538.1| peptidoglycan-associated lipoprotein [Escherichia coli E1520] gi|323942964|gb|EGB39128.1| peptidoglycan lipoprotein [Escherichia coli E482] gi|323946993|gb|EGB43007.1| peptidoglycan-associated lipoprotein [Escherichia coli H120] gi|323963122|gb|EGB58692.1| peptidoglycan lipoprotein [Escherichia coli H489] gi|323967344|gb|EGB62765.1| peptidoglycan lipoprotein [Escherichia coli M863] gi|323972028|gb|EGB67248.1| peptidoglycan lipoprotein [Escherichia coli TA007] gi|323976278|gb|EGB71368.1| peptidoglycan lipoprotein [Escherichia coli TW10509] gi|324020351|gb|EGB89570.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 117-3] gi|324116283|gb|EGC10204.1| peptidoglycan lipoprotein [Escherichia coli E1167] gi|326341510|gb|EGD65300.1| 18K peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O157:H7 str. 1044] gi|326345729|gb|EGD69468.1| 18K peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O157:H7 str. 1125] gi|327254430|gb|EGE66052.1| peptidoglycan-associated lipoprotein [Escherichia coli STEC_7v] gi|331060523|gb|EGI32487.1| peptidoglycan-associated lipoprotein [Escherichia coli TA143] gi|331065464|gb|EGI37357.1| peptidoglycan-associated lipoprotein [Escherichia coli TA271] gi|332093802|gb|EGI98856.1| peptidoglycan-associated lipoprotein [Shigella boydii 5216-82] gi|332096454|gb|EGJ01450.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae 155-74] gi|332097640|gb|EGJ02615.1| peptidoglycan-associated lipoprotein [Shigella boydii 3594-74] gi|332342078|gb|AEE55412.1| peptidoglycan-associated lipoprotein [Escherichia coli UMNK88] gi|332760890|gb|EGJ91178.1| peptidoglycan-associated lipoprotein [Shigella flexneri 4343-70] gi|332761270|gb|EGJ91556.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2747-71] gi|332763939|gb|EGJ94177.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-671] gi|332768160|gb|EGJ98345.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2930-71] gi|333007348|gb|EGK26828.1| peptidoglycan-associated lipoprotein [Shigella flexneri VA-6] gi|333007878|gb|EGK27354.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-218] gi|333010140|gb|EGK29575.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-272] gi|333021092|gb|EGK40349.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-227] gi|333021585|gb|EGK40835.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-304] Length = 173 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 68 NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 172 >gi|330818872|ref|YP_004351089.1| Outer membrane protein [Burkholderia gladioli BSR3] gi|327374414|gb|AEA65766.1| Outer membrane protein [Burkholderia gladioli BSR3] Length = 231 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 10/107 (9%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 NT F SS + L +VL + I G+TD + +R N RLS RA Sbjct: 129 NTVYFYVDSSQLDAKARAGL----DVLPIEASHVQIDGYTDNT---GTSRYNRRLSERRA 181 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 + + LM GV +I+ + ++ + NRR D++ Sbjct: 182 LAVKRYLMVRGVDAAKITT-TAHGESGAVASNHTAHGRALNRRADVM 227 >gi|296284930|ref|ZP_06862928.1| peptidoglycan-associated protein [Citromicrobium bathyomarinum JL354] Length = 371 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F+ S PE VL + + + G+TD + N L+ Sbjct: 260 PYIVFFNWDRSDITPEAASVLNNAISAYQNCGNASVMLAGYTDR---SGTVQYNLGLAAR 316 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 R S Q + G+ + RIS F ++ + NRR++I Sbjct: 317 RNASVRQYMTGRGIPDARISS-EAFGEANPRVPTADGVRELQNRRVEIT 364 >gi|284097464|ref|ZP_06385561.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3] gi|283831026|gb|EFC35039.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3] Length = 148 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 8/105 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLD 290 + F + + VL++ E+L + + ++ GH D N L Sbjct: 42 SDVFFGYDQYAIRSDAVPVLEEDAELLKSTYKDSAVLIEGHCDER---GTVEYNLELGKR 98 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333 RA + L+ G+ E RI +I + R NRR Sbjct: 99 RAQAVKDYLVDLGIEESRI-RIVSYGKERPFCTESEPSCWRQNRR 142 >gi|260912914|ref|ZP_05919399.1| peptidoglycan-associated lipoprotein [Pasteurella dagmatis ATCC 43325] gi|260632904|gb|EEX51070.1| peptidoglycan-associated lipoprotein [Pasteurella dagmatis ATCC 43325] Length = 151 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 + + NT F E + +L L+ + + + G+TD N Sbjct: 42 LQQRYNTVYFGFDKYNIEGEYVQILDAHAAYLSATPATKVVVEGNTDER---GTPEYNIA 98 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333 L RA + L GV ++S +S + + + + NRR Sbjct: 99 LGQRRADAVQNYLSAKGVQAGQVSTVS-YGEEKPAVLGHDEAAYSKNRR 146 >gi|90406796|ref|ZP_01214988.1| flagellar motor protein [Psychromonas sp. CNPT3] gi|90312033|gb|EAS40126.1| flagellar motor protein [Psychromonas sp. CNPT3] Length = 307 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 10/181 (5%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 D +I E + +K L+ L ++ LS + + + + + Sbjct: 85 EDSGPAIRSEGMINQANDELSDVDTLKAGWELKQLKTELEVLLSSEIDE---EVLKLDLD 141 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280 + I + +F S L L KI E L ++ IRG+TD + + Sbjct: 142 GDWLTIEMG---GDLLFAGGSHTLLIAAKKRLNKISEALKPINNLLRIRGYTDNNLIADE 198 Query: 281 -ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 + NW LS RA+S L G+ R+ + + + L + +RR+ I Sbjct: 199 IYQSNWELSGARAFSVLHALNSHGIDGRRMV-VEAYGRYTLAKDAQGKIDKLGSRRVVIA 257 Query: 338 V 338 + Sbjct: 258 I 258 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 35/85 (41%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 + + N+L W + +ADFMT++ A F++++ ++ ++ K + K L Sbjct: 6 RTRLKMHSGNDLHRWTVSFADFMTLMFAVFVLLYAVSINQEEQYKEVIVKIQKASKLLNQ 65 Query: 79 ASKGIFDEQNPPERSSQNKIDLSID 103 + E E S+ D Sbjct: 66 SVFSSEREGILTENSNSIIEDSGPA 90 >gi|330970538|gb|EGH70604.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT] Length = 830 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 33/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 639 RQTGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 ++ I I + +F + E L I L + + I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + I G + + D Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAI-GEGSEKPLVKCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|323493119|ref|ZP_08098250.1| putative sodium-type flagellar protein MotY precursor [Vibrio brasiliensis LMG 20546] gi|323312590|gb|EGA65723.1| putative sodium-type flagellar protein MotY precursor [Vibrio brasiliensis LMG 20546] Length = 304 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ E + L + L V + GHTD+ N LS RA Sbjct: 180 FNIGQKSLSSEQLTTLAALNSYLQADPSVSKILVDGHTDS---SGARASNLALSRVRAEL 236 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 + L GVS+ + ++ + + NRR+ + + Sbjct: 237 VSKQLHHLGVSQS-MIEVRAHGSRYPIATNTTTAGKAKNRRVTLRLVRSN 285 >gi|312897410|ref|ZP_07756834.1| OmpA family protein [Megasphaera micronuciformis F0359] gi|310621471|gb|EFQ05007.1| OmpA family protein [Megasphaera micronuciformis F0359] Length = 397 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 46/140 (32%), Gaps = 9/140 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 V + + + + + FD + I + L V Sbjct: 260 KKAAPAPVVAEQPRRQVVQEQPGHVYNDYYLESVHFAFDVDTPIAYDQGK--LDHFVAVA 317 Query: 260 AHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ + G+TDA N LS R + + + GV+ +++ ++S + Sbjct: 318 KEYPHDMFKLVGNTDAR---GTDAYNDDLSKRRVVNVARYAVDHGVNPEQL-ELSYEGKN 373 Query: 319 RLKIASDP--MNSANRRIDI 336 + + NRR+DI Sbjct: 374 DPVATNATDQGRADNRRVDI 393 >gi|239950061|gb|ACS36762.1| outer membrane protein P5 [Haemophilus parasuis] Length = 282 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 7/95 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 184 SDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 240 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 RA + ++ GV+ ++ + G+ + Sbjct: 241 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGN 274 >gi|192293517|ref|YP_001994122.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1] gi|192287266|gb|ACF03647.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1] Length = 216 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 15/201 (7%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + + S + +++ + + + A + + + + Sbjct: 22 AAFPLGDASAGEVTSDQIVRALTPNKPLTRSLSAAQPAAATGDPTQAKFVDSLRNRPTRS 81 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-- 263 L + + + I + I F+ +S+ + ++ +G+ L+ Sbjct: 82 LSSGERTQIAEITKDKPNIDLEIT-------FEYNSANISRQAAAAVEALGKALSSPDLK 134 Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK 321 + GHTD+ N LS RA + +VL++ G++ + + G+ RLK Sbjct: 135 GGTFVVAGHTDSV---GSDSFNQDLSERRADTIKRVLVEKYGIAGADLVTV-GYGESRLK 190 Query: 322 IASDPMNSANRRIDILVEDRQ 342 + P + NRR+ ++ Q Sbjct: 191 DPAHPDSGINRRVQVVNMSDQ 211 >gi|116329294|ref|YP_799014.1| flagellar motor protein MotB [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330099|ref|YP_799817.1| flagellar motor protein MotB [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122038|gb|ABJ80081.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123788|gb|ABJ75059.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 275 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 18/164 (10%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + L+K + V G++IS++ F+ S+I + L Sbjct: 87 KALSKSKKLATELFKPEVEAGKVKITEDERGLIISLVSADY---FNPGSAILTDSIKITL 143 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN---------IARDNWRLSLDRAYSAYQVLMK-S 302 +K ++ + + GH DA+ +NW L+ RA +A ++ Sbjct: 144 RKASSLIKELDRFVRVEGHCDANALNPGVAPGKEERAYINNWDLAGARAINATDYIINVE 203 Query: 303 GVSEDRISKISGFAHHRLK----IASDPMNSANRRIDILVEDRQ 342 + +S F R + + NRRIDI+V + Sbjct: 204 KLDPSWFQAVS-FGAFRPLVIEYAGTPEAKAYNRRIDIVVMTEK 246 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 33/90 (36%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + N+ + + Y D +T+L+ FF++++ T+ + I F Sbjct: 3 KSKCPECIQNIPEYMLTYGDMVTLLLCFFIMLYTTGKTNAIEMQIILSAFKTTTGFFDGG 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 + ++ + + ++K+ Sbjct: 63 QTLSKGRLEEMGMNIESLPSQTTGKALSKS 92 >gi|28897835|ref|NP_797440.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus RIMD 2210633] gi|153838023|ref|ZP_01990690.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus AQ3810] gi|260361766|ref|ZP_05774791.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus K5030] gi|260876995|ref|ZP_05889350.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus AN-5034] gi|260899066|ref|ZP_05907507.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus Peru-466] gi|260900753|ref|ZP_05909148.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus AQ4037] gi|28806048|dbj|BAC59324.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus RIMD 2210633] gi|149748557|gb|EDM59416.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus AQ3810] gi|308089146|gb|EFO38841.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus Peru-466] gi|308093872|gb|EFO43567.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus AN-5034] gi|308110189|gb|EFO47729.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus AQ4037] gi|308113254|gb|EFO50794.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus K5030] gi|328473192|gb|EGF44040.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus 10329] Length = 174 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + +L L+ + ++I GH D N L RA + Sbjct: 74 FAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADER---GTPEYNIALGERRAQAV 130 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L GV D+IS +S + + + + NRR ++ Sbjct: 131 ANYLQALGVQADQISIVS-YGEEKPLLLGQSDEVYAKNRRAVLV 173 >gi|258621333|ref|ZP_05716367.1| Outer membrane protein [Vibrio mimicus VM573] gi|258586721|gb|EEW11436.1| Outer membrane protein [Vibrio mimicus VM573] Length = 278 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 85/272 (31%), Gaps = 25/272 (9%) Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 G + PE+ + ++ D +G + + + E Sbjct: 15 GTAGCTSYPEKGRGGIAEAYMNGEFAPVMPDEPLGPEHG--------LRFDWQLSKLHLE 66 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + + + + + L + + ++ KR +L+ ++S Sbjct: 67 SLIREGAKWCFPAAVVQALEKQNRIARQLDGGLLLDAANDLVIQRKRLNQLEQQLDYVTS 126 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + N V + + + F +S+ P+ + L + L Sbjct: 127 QTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQ---FAINSTEINPKYMGNLAIAADKLKA 183 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + +S+ GH D+ A N +L++ RA + L G++ +RI+ S Sbjct: 184 RQDLTLSVTGHADS---SGNAEFNEKLAMGRAEQVKRYLTIFGLAPERITTHS-LGESLP 239 Query: 321 KIASDPMNSA--NRRIDILV-------EDRQG 343 + NRR+ I + +QG Sbjct: 240 LYVGETPGVKLTNRRVSIEIITADSPNLSKQG 271 >gi|170698906|ref|ZP_02889966.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|170136159|gb|EDT04427.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] Length = 85 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 I GHTD + LS RA + L+ + +++ +G + +D Sbjct: 15 IIGHTDN---SGNRTSHIALSQARADAVKGYLITKSIPPQQMTT-TGVGPDQPIAPNDTA 70 Query: 328 --NSANRRIDILV 338 + NRRID V Sbjct: 71 DGRARNRRIDFRV 83 >gi|123443145|ref|YP_001007119.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238752128|ref|ZP_04613611.1| Peptidoglycan-associated lipoprotein [Yersinia rohdei ATCC 43380] gi|238765244|ref|ZP_04626173.1| Peptidoglycan-associated lipoprotein [Yersinia kristensenii ATCC 33638] gi|332160930|ref|YP_004297507.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122090106|emb|CAL12969.1| peptidoglycan-associated lipoprotein Pal [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238696516|gb|EEP89304.1| Peptidoglycan-associated lipoprotein [Yersinia kristensenii ATCC 33638] gi|238709705|gb|EEQ01940.1| Peptidoglycan-associated lipoprotein [Yersinia rohdei ATCC 43380] gi|318604837|emb|CBY26335.1| 18k peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor [Yersinia enterocolitica subsp. palearctica Y11] gi|325665160|gb|ADZ41804.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330864066|emb|CBX74143.1| peptidoglycan-associated lipoprotein [Yersinia enterocolitica W22703] Length = 168 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277 + + + + + N F + +L L + + GH D Sbjct: 50 EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 107 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA + L GVS D+IS +S + + + + NRR Sbjct: 108 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 165 Query: 336 IL 337 ++ Sbjct: 166 LV 167 >gi|118591643|ref|ZP_01549039.1| hypothetical protein SIAM614_21907 [Stappia aggregata IAM 12614] gi|118435636|gb|EAV42281.1| hypothetical protein SIAM614_21907 [Stappia aggregata IAM 12614] Length = 316 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 59/203 (29%), Gaps = 21/203 (10%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 E + ++ ++ + A RL+D +++ ++ + + Sbjct: 117 GEILRRQQQTLPAFRAYQEALGLVDDTELTPAEPAHAMIARLRDRLDELAVVVAQISEEP 176 Query: 211 IVKGVLFETTRTGILISIIDQRNT--------PMFDKSSSIPLPETIVVLQKIGEVL-AH 261 + + I R F + + + E L Sbjct: 177 QDIKIPVTRSGQSISQYSFSTRGYKRKKTLVPIQFVYDQDVMTKAGKTSFEDVQEALEKQ 236 Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I + GHTD N +LSL RA + L+ +G S ++ G + Sbjct: 237 GAPDIQVIGHTDPV---GSDAYNLQLSLKRAEAVRSALLAAGYSGS--IEVLGMGESQPF 291 Query: 322 IASD----PMNSAN---RRIDIL 337 D N RR++ + Sbjct: 292 QFDDPSLYTEEVRNQAHRRVEFV 314 >gi|116621983|ref|YP_824139.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225145|gb|ABJ83854.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 199 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 11/120 (9%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRN 279 + ++ + FD + P+ + L L + I GH D Sbjct: 78 IDQLLAKIEDAYFDYDKASLRPDAMKALNADSTELRDILKDYPDYKLRIEGHADER---G 134 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDIL 337 A N L RA +A + L++ G+ ++ ++ F R ++ NRRI I+ Sbjct: 135 SAEYNVALGDRRAATAKEYLVQVGIPSTQLD-VTSFGKERPVCQDHNENCWQKNRRIHIV 193 >gi|296284884|ref|ZP_06862882.1| outer membrane protein [Citromicrobium bathyomarinum JL354] Length = 210 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 13/116 (11%) Query: 237 FDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + + L + + E + +RGH+DA R N R+S +RA + Sbjct: 63 FGAGGTELDETAMAELNGLLDTDQWKQVERVILRGHSDA---GGPDRVNMRVSEERAQAV 119 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--------IASDPMNSANRRIDILVEDRQG 343 LM+ G++ED+I +I F ++ +ANRR++I + +G Sbjct: 120 ADWLMEQGLTEDQI-RIIAFGAQNPVQPNLLPNGEPNERGRAANRRVEITILVPKG 174 >gi|197284482|ref|YP_002150354.1| peptidoglycan-associated outer membrane lipoprotein [Proteus mirabilis HI4320] gi|194681969|emb|CAR41402.1| peptidoglycan-associated lipoprotein [Proteus mirabilis HI4320] Length = 165 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 38/116 (32%), Gaps = 7/116 (6%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 + + Q N F E +L L + I+I GH D Sbjct: 53 QLEQLKQTNIVYFGFDKYDVTSEYAQLLDAHAAFLRANPSVRITIEGHADER---GTPEY 109 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 N L RA + L GVS D++ I + + + + NRR ++ Sbjct: 110 NIALGERRANAVKMYLQGKGVSADQL-AIVSYGKEKPAVLGHDEAAYAKNRRAVLV 164 >gi|257092706|ref|YP_003166347.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045230|gb|ACV34418.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 225 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +FD + + P L ++ + I GHTD N +LS RA Sbjct: 109 DALFDFNKATLRPAGKAKLDEVVAKAGAIKLEVIIAVGHTDRI---GSDAYNQKLSERRA 165 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-----------NRRIDILVEDR 341 + Q L+ G+ +R+ G D +RR+DI + Sbjct: 166 AAVKQYLVSKGIDANRVYT-EGKGKKNPVTKPDQCLGKTSPKVIACLQPDRRVDIELIGT 224 Query: 342 Q 342 + Sbjct: 225 K 225 >gi|254228801|ref|ZP_04922224.1| OmpA family protein [Vibrio sp. Ex25] gi|151938748|gb|EDN57583.1| OmpA family protein [Vibrio sp. Ex25] Length = 281 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 8/111 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD + + L + ++ I I GHTD + N +S RA Sbjct: 152 SFDFGQKVLSRKQQETLAALNSYVSVDDRVTKILIDGHTDNV---GSSLANLSVSRTRAE 208 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L++ G+ + + + +++ + NRR+ + + Sbjct: 209 QVAEALVELGIDKS-MIETRAHGSRYPIASNNSTKGQAKNRRVTLRLVRDN 258 >gi|304312902|ref|YP_003812500.1| Bacterial outer membrane protein, OmpA [gamma proteobacterium HdN1] gi|301798635|emb|CBL46867.1| Bacterial outer membrane protein, OmpA [gamma proteobacterium HdN1] Length = 169 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + FD S + +LQ + L+ I I GH D N L Sbjct: 58 SQRVVYFDFDKSAVRADAYEILQAHAQYLSSHAGARIRIEGHADER---GTREYNMALGE 114 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + L +G ++ ++ + + + NRR +++ Sbjct: 115 RRAKAVQSFLNANGAGAGQL-EVVSYGEENPIALGHDEASWAQNRRSELV 163 >gi|261211953|ref|ZP_05926239.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC341] gi|260838561|gb|EEX65212.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC341] Length = 294 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 11/161 (6%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + R Q + +S+ L + + + IS S Sbjct: 140 QDWQSRDQRIEVALSAVLFQQPYNEFSDCISKLLPYSFEDISFTILHYD---QGDSVELN 196 Query: 246 PETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + L +I E + +++++ + +TD++ N + LS RA + G Sbjct: 197 KASQKRLAQIAEYIRYNSDIDLVLVSTYTDSTDTNNNS---QNLSEKRAEVLREYFKSIG 253 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + EDRI ++ G+ R + NRR+ I + Q Sbjct: 254 LPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293 >gi|156934764|ref|YP_001438680.1| peptidoglycan-associated outer membrane lipoprotein [Cronobacter sakazakii ATCC BAA-894] gi|260597140|ref|YP_003209711.1| peptidoglycan-associated outer membrane lipoprotein [Cronobacter turicensis z3032] gi|156533018|gb|ABU77844.1| hypothetical protein ESA_02604 [Cronobacter sakazakii ATCC BAA-894] gi|260216317|emb|CBA29304.1| Peptidoglycan-associated lipoprotein [Cronobacter turicensis z3032] Length = 172 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 67 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 123 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 124 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 171 >gi|303231313|ref|ZP_07318049.1| OmpA family protein [Veillonella atypica ACS-049-V-Sch6] gi|302514043|gb|EFL56049.1| OmpA family protein [Veillonella atypica ACS-049-V-Sch6] Length = 339 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +P + LQ + G+ D + N LS R Sbjct: 237 FDSDQDVPRADQGANLQAALNAANQYKNDQVKLLGNADTD---ANPQYNIGLSERRVQDV 293 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 Q L+ +GV +R+ I+ + + N + NRR+D+ + Sbjct: 294 AQYLVNNGVDANRLIGIA-NGDAKPVATNATANGKAENRRVDVFIHR 339 >gi|323494859|ref|ZP_08099951.1| OmpA family protein [Vibrio brasiliensis LMG 20546] gi|323310823|gb|EGA63995.1| OmpA family protein [Vibrio brasiliensis LMG 20546] Length = 296 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD S + + ++ + ISI GHTD ++ N +LSL RA + Sbjct: 60 FDFDKSELKEQDKQSIDQLMASIGKLHGQISIVGHTD---YQGSDDYNVKLSLRRAEAVK 116 Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342 + + R ++ + + + S N+ NRR ++ E Q Sbjct: 117 AYMQSK-LDASRYDWEVKYYGESKPLVEGVSKQANAENRRAYVIFEQTQ 164 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 12/167 (7%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + K L K+ ++ + +++ FD Sbjct: 136 GESKPLVEGVSKQANAENRRAYVIFEQTQTQQENIFCEPPEPERKVYVAMTSH-----FD 190 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + P L + L + I GHTD ++ N +L+ RA S Q Sbjct: 191 FDKAQLNPADKASLDEFASNLTGLNGRVLIAGHTD---YQGSISYNEKLAQLRAESVMQY 247 Query: 299 LMKSGVSEDRIS-KISGFAHHRLKIASD--PMNSANRRIDILVEDRQ 342 L + + ++ F N+ NRR ++ ++ + Sbjct: 248 LQTK-LDPSQFVWEVKSFGELNPVTQEQDLDANALNRRAFVVFKEGE 293 >gi|319760471|ref|YP_004124409.1| peptidoglycan-associated lipoprotein [Candidatus Blochmannia vafer str. BVAF] gi|318039185|gb|ADV33735.1| peptidoglycan-associated lipoprotein [Candidatus Blochmannia vafer str. BVAF] Length = 175 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 35/106 (33%), Gaps = 7/106 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289 +N F +L L + I I GHTD N L Sbjct: 69 SKNIIYFPLDQYNIPSVFFDILDVHAIFLRKNPLHHIIIEGHTDER---GTPEYNIGLGE 125 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 RAYS + L GV ++IS IS + + S NRR Sbjct: 126 RRAYSIKKYLQSKGVLSNQISTIS-YGKEKPVSFGHTEESYSQNRR 170 >gi|312883339|ref|ZP_07743065.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309368955|gb|EFP96481.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 206 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ + L +G LA + + GH+D + N +LS+ RA Sbjct: 101 FHTGSASVSSNSRYWLDIMGSYLATQPGIDIVIDGHSDNT---GAPSFNDKLSIQRASEV 157 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 + L+++ VS I G+ + ++ + NRR+++ Sbjct: 158 KKQLVRNQVSMGSIYT-RGYGEYVPACSNKTSVGKACNRRVEV 199 >gi|281357860|ref|ZP_06244346.1| OmpA/MotB domain protein [Victivallis vadensis ATCC BAA-548] gi|281315807|gb|EFA99834.1| OmpA/MotB domain protein [Victivallis vadensis ATCC BAA-548] Length = 216 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 7/100 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S + +P L +I ++ E + + GH D N L RA + Sbjct: 110 FAYDSDVLVPSETANLDRIAAYMSDKPELGLLVEGHCDQR---GTEEYNRALGERRANAI 166 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333 L G+++ R+ IS + + + ++ NRR Sbjct: 167 RAYLAGKGLADTRMKTIS-YGEDKPAVEGNNEEAWRQNRR 205 >gi|163732772|ref|ZP_02140217.1| OmpA family domain protein [Roseobacter litoralis Och 149] gi|161394132|gb|EDQ18456.1| OmpA family domain protein [Roseobacter litoralis Och 149] Length = 217 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 5/110 (4%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLS 288 T F S+ E + +I E L + + G TDA N RL Sbjct: 17 DIGTINFAFDSAELDAEAQAKIVEIAERLKENPSYKPTVLIGFTDAVGGLG---YNDRLG 73 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 L RA + L++ GVS DRI +S L ++ NRR+ + + Sbjct: 74 LRRANAVSAALLEQGVSVDRIGGVSSRGERELLVSVAGPERQNRRVTVTL 123 >gi|238893777|ref|YP_002918511.1| peptidoglycan-associated outer membrane lipoprotein [Klebsiella pneumoniae NTUH-K2044] gi|238546093|dbj|BAH62444.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 182 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 77 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNIALGER 133 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 134 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 181 >gi|227356660|ref|ZP_03841046.1| peptidoglycan-associated lipoprotein [Proteus mirabilis ATCC 29906] gi|227163168|gb|EEI48099.1| peptidoglycan-associated lipoprotein [Proteus mirabilis ATCC 29906] Length = 176 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 7/116 (6%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 + + Q N F E +L L + I+I GH D Sbjct: 64 QLEQLKQTNIVYFGFDKYDVTSEYAQLLDAHAAFLRANPSVRITIEGHADER---GTPEY 120 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 N L RA + L GVS D++S +S + + + + NRR ++ Sbjct: 121 NIALGERRANAVKMYLQGKGVSADQLSIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 175 >gi|320156881|ref|YP_004189260.1| sodium-type flagellar protein motY [Vibrio vulnificus MO6-24/O] gi|319932193|gb|ADV87057.1| sodium-type flagellar protein motY precursor [Vibrio vulnificus MO6-24/O] Length = 254 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 56/159 (35%), Gaps = 8/159 (5%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + R Q + +S+ L + V + IS ++++ Sbjct: 101 QDWQSRDQRIEVALSAVLFQQKYNVFSDCVANLLPYSFEDISFTILH----YERNGDKLT 156 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L +I E + +++++ + T + LS RA S G++ Sbjct: 157 KASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVS-QNLSERRAESLRDYFKALGLT 215 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 EDRI ++ G+ R + NRR+ I + + Sbjct: 216 EDRI-QVQGYGKRRPIADNATPIGKDKNRRVVISLGRSE 253 >gi|262041199|ref|ZP_06014411.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041428|gb|EEW42487.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 174 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 69 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNIALGER 125 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 126 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 173 >gi|225569968|ref|ZP_03778993.1| hypothetical protein CLOHYLEM_06063 [Clostridium hylemonae DSM 15053] gi|225161438|gb|EEG74057.1| hypothetical protein CLOHYLEM_06063 [Clostridium hylemonae DSM 15053] Length = 255 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 42/112 (37%), Gaps = 6/112 (5%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 +K++ + W Y D +T+L+ FF++++ I++ D + + + NP Sbjct: 1 MKRRQKSPEE---GSDWMGTYGDMVTLLLCFFVLLYSISSVDQVKWENLVKSMNP---EA 54 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 S+ + D + + + + D + + + ++ Sbjct: 55 AEPSQIVTDTMEKEGTENVPGANTTEIDQKFDEMYDNLLKMQDASGEVADIQ 106 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 59/185 (31%), Gaps = 10/185 (5%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 ++ + E + + Q + + L A V + Sbjct: 53 EAAEPSQIVTDTMEKEGTENVPGANTTEIDQKFDEMYDNLLKMQDASGEVADIQIAKGDG 112 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDAS--PF 277 I+ D FD S + E VL V+A + + I + GHT + Sbjct: 113 YQFITFKDN---VFFDGDSYVLRDEGKSVLDTFSSVIAPASDAIKEIQVLGHTSQAEPNI 169 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 N + LS R+ + + + E + +G+ R D + NRR++ Sbjct: 170 PNEVMTDRVLSATRSAVVVAYVQQKNIIEAKKLVSAGYGQFRPIDTFDTFEGRARNRRVE 229 Query: 336 ILVED 340 IL+ Sbjct: 230 ILITK 234 >gi|1171900|sp|P45996|OMP53_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; AltName: Full=Fimbrin; Flags: Precursor gi|305373|gb|AAA24959.1| fimbrial protein [Haemophilus influenzae] Length = 359 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 16/118 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P+ L + ++ + G+T+ N +LS +RA S Sbjct: 246 FAFGKANLKPQAQATLDSVYGEISQVKSRKVAVAGYTNRI---GSDAFNVKLSQERADSV 302 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILVEDRQ 342 + GV+ D IS +G+ D + +RR++I V + Sbjct: 303 ANYFVAKGVAADAISA-TGYGEANPVTGATCDQVKGRKALIACLAPDRRVEIAVNGTK 359 >gi|331641242|ref|ZP_08342377.1| peptidoglycan-associated lipoprotein [Escherichia coli H736] gi|331651749|ref|ZP_08352768.1| peptidoglycan-associated lipoprotein [Escherichia coli M718] gi|331672263|ref|ZP_08373054.1| peptidoglycan-associated lipoprotein [Escherichia coli TA280] gi|331676423|ref|ZP_08377120.1| peptidoglycan-associated lipoprotein [Escherichia coli H591] gi|332282410|ref|ZP_08394823.1| peptidoglycan-associated outer membrane lipoprotein [Shigella sp. D9] gi|331038040|gb|EGI10260.1| peptidoglycan-associated lipoprotein [Escherichia coli H736] gi|331050027|gb|EGI22085.1| peptidoglycan-associated lipoprotein [Escherichia coli M718] gi|331070458|gb|EGI41822.1| peptidoglycan-associated lipoprotein [Escherichia coli TA280] gi|331075916|gb|EGI47213.1| peptidoglycan-associated lipoprotein [Escherichia coli H591] gi|332104762|gb|EGJ08108.1| peptidoglycan-associated outer membrane lipoprotein [Shigella sp. D9] Length = 181 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 76 NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 132 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 133 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 180 >gi|258593271|emb|CBE69610.1| exported protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 224 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 FD S E L + L + I I GH D N L R Sbjct: 119 KDIFFDFDRSSIRTEMAKGLAENVRWLKANPTASIIIEGHCDER---GTVEYNQALGQRR 175 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 A S L+++G+S ++ +S + R + NRR ++++ Sbjct: 176 AMSVKSYLVEAGISARKMKVVS-YGKERPFATGHDESAWKWNRRAHLVLQ 224 >gi|281602014|gb|ADA74998.1| putative outer membrane protein [Shigella flexneri 2002017] Length = 160 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 6/109 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVI 157 >gi|110640949|ref|YP_668677.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli 536] gi|117622932|ref|YP_851845.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli APEC O1] gi|215485763|ref|YP_002328194.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O127:H6 str. E2348/69] gi|218557654|ref|YP_002390567.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli S88] gi|218688532|ref|YP_002396744.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli ED1a] gi|227884292|ref|ZP_04002097.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli 83972] gi|300992344|ref|ZP_07179867.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 200-1] gi|300993167|ref|ZP_07180250.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 45-1] gi|301051339|ref|ZP_07198162.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 185-1] gi|306812852|ref|ZP_07447045.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli NC101] gi|312965177|ref|ZP_07779414.1| peptidoglycan-associated lipoprotein [Escherichia coli 2362-75] gi|331656760|ref|ZP_08357722.1| peptidoglycan-associated lipoprotein [Escherichia coli TA206] gi|331682171|ref|ZP_08382793.1| peptidoglycan-associated lipoprotein [Escherichia coli H299] gi|110342541|gb|ABG68778.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli 536] gi|115512056|gb|ABJ00131.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli APEC O1] gi|215263835|emb|CAS08173.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O127:H6 str. E2348/69] gi|218364423|emb|CAR02103.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli S88] gi|218426096|emb|CAR06914.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli ED1a] gi|222032477|emb|CAP75216.1| Peptidoglycan-associated lipoprotein [Escherichia coli LF82] gi|227839044|gb|EEJ49510.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli 83972] gi|281177884|dbj|BAI54214.1| peptidoglycan-associated lipoprotein [Escherichia coli SE15] gi|294493682|gb|ADE92438.1| peptidoglycan-associated lipoprotein [Escherichia coli IHE3034] gi|300297001|gb|EFJ53386.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 185-1] gi|300305361|gb|EFJ59881.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 200-1] gi|300406697|gb|EFJ90235.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 45-1] gi|305853615|gb|EFM54054.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli NC101] gi|307552592|gb|ADN45367.1| peptidoglycan-associated lipoprotein [Escherichia coli ABU 83972] gi|307627845|gb|ADN72149.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli UM146] gi|312290268|gb|EFR18151.1| peptidoglycan-associated lipoprotein [Escherichia coli 2362-75] gi|312945265|gb|ADR26092.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli O83:H1 str. NRG 857C] gi|315287144|gb|EFU46556.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 110-3] gi|315292655|gb|EFU52007.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 153-1] gi|315299256|gb|EFU58508.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 16-3] gi|323191086|gb|EFZ76351.1| peptidoglycan-associated lipoprotein [Escherichia coli RN587/1] gi|323953133|gb|EGB49000.1| peptidoglycan lipoprotein [Escherichia coli H252] gi|323958485|gb|EGB54191.1| peptidoglycan lipoprotein [Escherichia coli H263] gi|324009565|gb|EGB78784.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 57-2] gi|324010464|gb|EGB79683.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 60-1] gi|330910492|gb|EGH39002.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli AA86] gi|331055008|gb|EGI27017.1| peptidoglycan-associated lipoprotein [Escherichia coli TA206] gi|331080595|gb|EGI51771.1| peptidoglycan-associated lipoprotein [Escherichia coli H299] Length = 173 Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 68 NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 172 >gi|327539245|gb|EGF25868.1| OmpA/MotB domain protein [Rhodopirellula baltica WH47] Length = 282 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 82/259 (31%), Gaps = 14/259 (5%) Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 QNP + N + ++ N++ Q N +Q + + Sbjct: 27 SQNPYLAGGGTSVWQPPPSTTAVNGIQAQVAELNRRVQLLDDNNRQLTTQLAQSEQQSQV 86 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + K L +T +S + A R ++ Sbjct: 87 YRDELNLVRKQLSDTTQQYESARIAAQDAQTQARSFQASAQMRGGATIRANTNLNQMAGR 146 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-- 263 L + E + + + + +F + + P +L L Sbjct: 147 LNLGGLK----VEQDGEVLRVVLPSDQ---LFAQGTGQLQPSAGAILDPTAAQLRSVFPR 199 Query: 264 EVISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK 321 + I I G+TD +P + A +L+ + + L + G+ E ++ ++ + + Sbjct: 200 QRIGIEGYTDNAPMYGGAAGSAHQLTSAQTGAVLDWLTRRSGMPEQQLFTVA-QGSNNPR 258 Query: 322 IASDP--MNSANRRIDILV 338 + +ANRRI++++ Sbjct: 259 QDNTTPAGRAANRRIELVI 277 >gi|258626845|ref|ZP_05721652.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM603] gi|262165947|ref|ZP_06033684.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus VM223] gi|262171200|ref|ZP_06038878.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus MB-451] gi|258580892|gb|EEW05834.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM603] gi|261892276|gb|EEY38262.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus MB-451] gi|262025663|gb|EEY44331.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus VM223] Length = 173 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + T F ++ + +L L + ++I GH D N L Sbjct: 67 ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTIEGHADER---GTPEYNIALGE 123 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV ++S +S + + + + + NRR ++ Sbjct: 124 RRAQAVAKYLEALGVQSGQLSIVS-YGEEKPLVLGQSEDAYAKNRRAVLV 172 >gi|170681549|ref|YP_001744788.1| putative outer membrane lipoprotein [Escherichia coli SMS-3-5] gi|218701117|ref|YP_002408746.1| putative outer membrane lipoprotein [Escherichia coli IAI39] gi|170519267|gb|ACB17445.1| OmpA family protein [Escherichia coli SMS-3-5] gi|218371103|emb|CAR18931.1| putative outer membrane lipoprotein [Escherichia coli IAI39] Length = 160 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVISAP 160 >gi|221209346|ref|ZP_03582327.1| OmpA family protein [Burkholderia multivorans CGD1] gi|221170034|gb|EEE02500.1| OmpA family protein [Burkholderia multivorans CGD1] Length = 277 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 35/119 (29%), Gaps = 17/119 (14%) Query: 233 NTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRL 287 +F + S P L + I GHTD N L Sbjct: 159 GEALFPFAKSSLDSMLPGGRAELDDAIAKIRAERGTTRIEVVGHTDRI---GSDESNRAL 215 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILV 338 S RA + + L+ G+ RI + G + P +RR+ I V Sbjct: 216 SRARAETVKRYLVAHGLDAARI-RTEGAGSSQPVSHCPPGESPAVIACLQKDRRVTITV 273 >gi|156975261|ref|YP_001446168.1| hypothetical protein VIBHAR_02990 [Vibrio harveyi ATCC BAA-1116] gi|156526855|gb|ABU71941.1| hypothetical protein VIBHAR_02990 [Vibrio harveyi ATCC BAA-1116] Length = 293 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 10/158 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 + Q ++I LS ++ N V + S D T + +++ + Sbjct: 140 QDWQSRDQRIEVALSSVLFQN-KYNVFSSCIANLLKYSFEDIAFTILHYERQGDQLTKAS 198 Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L +I + + H+ ++ + +TD++ ++ ++ LS RA S G+S Sbjct: 199 KKRLAQIADYVRHNQDIDLVLVATYTDSTDGKSTSQS---LSERRAESLRSYFESLGLSG 255 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 +RI ++ G+ R + NRR+ I + Q Sbjct: 256 ERI-QVQGYGKRRPIADNGSPIGKDKNRRVVISLGRTQ 292 >gi|308050039|ref|YP_003913605.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] gi|307632229|gb|ADN76531.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] Length = 296 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 64/205 (31%), Gaps = 22/205 (10%) Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 + ++ ++ + L+ L + + L ++D Sbjct: 85 SQVVAPQWQHRAAAPSAMRLWQWTGRQAAMEGDATPYLEALEQGLGWQLEVQISDESGYR 144 Query: 215 VLFETTRTGILISIIDQRNTPM--------------FDKSSSIPLPETIVVLQKIGEVLA 260 + E ++ Q T + + +P + L I +A Sbjct: 145 LNAEPVAVRSALNQFRQCRTALVPQPFSAVRHVTLSYRSGQLLPNTAQLNQLSDIAAYVA 204 Query: 261 H--STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + GHTD N LS DRA +L + G+S DRI ++ G Sbjct: 205 ADPRITEVLVDGHTDNV---GDHLANLALSRDRADEVGALLHERGISRDRI-QVRGHGER 260 Query: 319 RLKIASDPMNSA--NRRIDILVEDR 341 ++++ NRR+ I + Sbjct: 261 YPLLSNNNAQGRQHNRRVTIRLVRD 285 >gi|261837954|gb|ACX97720.1| flagellar motor rotation protein [Helicobacter pylori 51] Length = 255 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 83/207 (40%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDAINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VLM+ GV+ +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLAKTRFKSHYELAANRAYRVMKVLMQYGVNPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|167374415|gb|ABZ79137.1| outer membrane protein [Riemerella anatipestifer] Length = 338 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 74/268 (27%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 88 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 147 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ +++ C T + ++ ++ Sbjct: 148 EVAGPVENKGCPRPDTDNDGVLDKDDACPEVAGAVENSGCPCPD---------------- 191 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + ++ F + S PE+ L Sbjct: 192 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGALQGIFFHFNKSSIRPESNTKL 251 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GVS ++ Sbjct: 252 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 308 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 309 -KGVGSAEATVPASASNEERMKDRKVVV 335 >gi|167837695|ref|ZP_02464578.1| outer membrane protein, OmpA family [Burkholderia thailandensis MSMB43] Length = 170 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + + FD S + +LQ+ + L + I I+G+TD + N L Sbjct: 63 KRSVYFDFDSYSVQDQYQSLLQQHAQYLKSHPQRHILIQGNTDER---GTSEYNLALGQK 119 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + + L GV + ++ +S + + + NRR D++ Sbjct: 120 RAEAVRRALSLLGVGDAQMEAVS-LGKEKPVALGHDEASWAQNRRADLV 167 >gi|126664571|ref|ZP_01735555.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter sp. ELB17] gi|126630897|gb|EBA01511.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter sp. ELB17] Length = 147 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 6/101 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + + + +L + G L + + + GH+DA LS RA + Sbjct: 39 YGYNKHQLSAADMDMLTRHGHYLRRNVHLHVRVHGHSDAF---GTDDYGHFLSRMRASAV 95 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + L++ GV E R+ + G+ R ++ANRR+++ Sbjct: 96 VRFLIEEGVEEQRLKAV-GWGSDRPLAT-RADHAANRRVEL 134 >gi|323491407|ref|ZP_08096592.1| Outer membrane protein [Vibrio brasiliensis LMG 20546] gi|323314533|gb|EGA67612.1| Outer membrane protein [Vibrio brasiliensis LMG 20546] Length = 203 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 7/113 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 +F SS P + ++++ E L I +RG+ N LS RA Sbjct: 81 HILFANDSSEIQPAFLAQIREMSEFLEAYPSTSIELRGYASKV---GKPDYNMALSERRA 137 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 S L+ +GV+ DR+ +I GF L+ + ++ NR++ V +G Sbjct: 138 QSVEDALLDNGVASDRV-RIVGFGDTELEAFGDDEISHAKNRKVVATVVGHKG 189 >gi|317047358|ref|YP_004115006.1| peptidoglycan-associated lipoprotein [Pantoea sp. At-9b] gi|316948975|gb|ADU68450.1| peptidoglycan-associated lipoprotein [Pantoea sp. At-9b] Length = 170 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N F E +L + L + +I GH D N L Sbjct: 65 NNIVYFGLDKYDVQSEYAQMLDQHAAFLRSNPSYKVTIEGHADER---GTPEYNIALGER 121 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D++S +S + + + + NRR ++ Sbjct: 122 RANAVKMYLQGKGVSADQMSIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 169 >gi|269128089|ref|YP_003301459.1| OmpA/MotB domain-containing protein [Thermomonospora curvata DSM 43183] gi|268313047|gb|ACY99421.1| OmpA/MotB domain protein [Thermomonospora curvata DSM 43183] Length = 365 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 33/110 (30%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSL 289 + +F S+ L + L T + + GHTD DN LS Sbjct: 87 QADVLFKTGSADLSAAAEKYLADVVAKLKEANVTGEVQVVGHTDDV---GEPEDNLALSK 143 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 RA + Q + + G + NRR+ IL Sbjct: 144 RRAEAVVQAMQPQLANTGITLIPEGKGESEPREKGTSPQARQRNRRVSIL 193 >gi|186472558|ref|YP_001859900.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815] gi|184194890|gb|ACC72854.1| OmpA/MotB domain protein [Burkholderia phymatum STM815] Length = 207 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 8/109 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292 +FD ++ P++ V +Q++ VLA +++ GHTD + RLS+ RA Sbjct: 104 NFLFDSAT-ELAPQSAVTVQQMKAVLATWPAPHLTVVGHTD---LAGSPEYDDRLSMQRA 159 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 + + L+K+G+ +I + + + N NRR+ I ++ Sbjct: 160 QTVAKFLIKAGIPARQIETAA-RGKREPLVHTADGVPNQMNRRVVITIQ 207 >gi|71909209|ref|YP_286796.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71848830|gb|AAZ48326.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 193 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSL 289 ++ F + +S ++ L + + + I + GHTD N RL+ Sbjct: 86 KKFMLYFLEGTSELTADSKKELDGVFDEIKKRKVTDIVVIGHTDTV---GSQESNDRLAE 142 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339 RA + L GV I +SG + A + NRR++I V Sbjct: 143 ARAKAMQAELEHLGVDAGSIK-VSGRGEREPLVKTADEVAEPLNRRVEIQVR 193 >gi|83943232|ref|ZP_00955692.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp. EE-36] gi|83846240|gb|EAP84117.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp. EE-36] Length = 665 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 79/274 (28%), Gaps = 15/274 (5%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 G +++ S ++P K D ++ + + Sbjct: 389 VGSILNNGSKVVSNSGDRLVVEDPNGDLRVLKDDDALVRQAGDEVRRETFNDGSSRTTVI 448 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + + + L T E+ I E + P + Sbjct: 449 KPNGSKIVTILGRDGTVLRRINVDPQGNEYVLFDDTQAEERIVVNELPQVRPQANTLASQ 508 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + L ++ + + V+ V + + + F S+ Sbjct: 509 QNEEALRAALQTQLRGDQAQRYSLRQVRDVRQVRALAPEI-----ELDAVRFATGSAAIQ 563 Query: 246 PETIVVLQKIGEVLA-----HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 PE L KIG ++ VI + GHTDA N LS RA + L Sbjct: 564 PEQARALSKIGTAISNAIKDDPRTVILVEGHTDAVGNAG---YNLALSDRRAETVALALT 620 Query: 301 KS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333 + V + G+ LK+ ++ ANRR Sbjct: 621 EYFDVPPANLIT-QGYGESALKVPTETAEPANRR 653 >gi|316931816|ref|YP_004106798.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315599530|gb|ADU42065.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1] Length = 334 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285 NT FD S P+ LQ I + L EV I GHTDA DN Sbjct: 202 DLNTINFDTGSWDIPPDQAAKLQVIADGLNRAIQRNPREVFLIEGHTDAV---GNDTDNL 258 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA SA +L + GV + ++ G+ LK+ + NRR+ I Sbjct: 259 SLSDRRAESAAALLTQQFGVPAENLTS-QGYGEQYLKVNTQAAERQNRRVTI 309 >gi|37704654|gb|AAR01599.1| OprF [Pseudomonas sp. MFY143] Length = 297 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD ++ + + ++ + + + ++ G+TD+ N +LS RA S Sbjct: 215 FDFDKAVVKSQYLPDIKNVAQFMQQYPATSTTVNGYTDSV---GTDAYNLKLSQRRADSV 271 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI 322 Q L++ GVS R+ + G Sbjct: 272 RQALVQQGVSACRVDAV-GHGKADPVA 297 >gi|157414881|ref|YP_001482137.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 81116] gi|157385845|gb|ABV52160.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 81116] gi|307747518|gb|ADN90788.1| Chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni M1] gi|315931798|gb|EFV10753.1| ompA family protein [Campylobacter jejuni subsp. jejuni 327] Length = 317 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 100/321 (31%), Gaps = 52/321 (16%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+++ + + + Sbjct: 12 W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151 + + ++ +L+ K L N L+ + Q + ++T Sbjct: 45 KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208 + KDL + D + L +E + ++ ++ + I LS + Sbjct: 105 QLSKDLNLTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQ 164 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258 + + + I + +FDK S + E L+K Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316 + + E I I GHTD+ N LS RAY + S+ ++ SG + Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276 Query: 317 HHRLKIASDPMN-SANRRIDI 336 + + +RRI+I Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297 >gi|152969309|ref|YP_001334418.1| peptidoglycan-associated outer membrane lipoprotein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206576207|ref|YP_002239637.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae 342] gi|288936478|ref|YP_003440537.1| peptidoglycan-associated lipoprotein [Klebsiella variicola At-22] gi|290510465|ref|ZP_06549835.1| peptidoglycan-associated lipoprotein [Klebsiella sp. 1_1_55] gi|329998743|ref|ZP_08303197.1| peptidoglycan-associated lipoprotein [Klebsiella sp. MS 92-3] gi|150954158|gb|ABR76188.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206565265|gb|ACI07041.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae 342] gi|288891187|gb|ADC59505.1| peptidoglycan-associated lipoprotein [Klebsiella variicola At-22] gi|289777181|gb|EFD85179.1| peptidoglycan-associated lipoprotein [Klebsiella sp. 1_1_55] gi|328538570|gb|EGF64674.1| peptidoglycan-associated lipoprotein [Klebsiella sp. MS 92-3] Length = 174 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 69 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNIALGER 125 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 126 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 173 >gi|68249712|ref|YP_248824.1| outer membrane protein P5 [Haemophilus influenzae 86-028NP] gi|68057911|gb|AAX88164.1| Outer membrane protein P5 [Haemophilus influenzae 86-028NP] Length = 359 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 16/118 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P+ L + ++ +++ G+TD N +LS +RA S Sbjct: 246 FAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGYTDRI---GSDAFNVKLSQERADSV 302 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA---------NRRIDILVEDRQ 342 + GV+ D IS +G+ D + +RR++I V + Sbjct: 303 ANYFVAKGVAADAISA-TGYGKANPVTGATCDQVKGRKALIACLAPDRRVEIAVNGTK 359 >gi|28898249|ref|NP_797854.1| hypothetical protein VP1475 [Vibrio parahaemolyticus RIMD 2210633] gi|308125351|ref|ZP_05774746.2| outer membrane protein [Vibrio parahaemolyticus K5030] gi|28806466|dbj|BAC59738.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308113621|gb|EFO51161.1| outer membrane protein [Vibrio parahaemolyticus K5030] Length = 300 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 7/158 (4%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +++RL L +++ L+ + F S+ P+ Sbjct: 118 QRRRLNQLEQQLDYVLTQTTCTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPK 177 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + L + +L + + GH D N +L+ +RA + L GV+ Sbjct: 178 YMGHLAEAAYILRDHPALSLVVTGHAD---VTGTPEHNKKLAQERAEQVKRYLSVFGVTS 234 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 DR+ NRR+ I V Sbjct: 235 DRVQT-KSVGDTLPLYEGQTPAVRLTNRRVSIEVLSAN 271 >gi|182412224|ref|YP_001817290.1| OmpA/MotB domain-containing protein [Opitutus terrae PB90-1] gi|177839438|gb|ACB73690.1| OmpA/MotB domain protein [Opitutus terrae PB90-1] Length = 266 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 + G+WK+ YADF+T +MA F+V+W I+A D A QYF + M A+ Sbjct: 3 RKKAAAGHGGAWKVAYADFVTAMMALFMVLW-ISAQDQKILIATSQYFQNPFQAPMLAAS 61 Query: 82 GIFDEQNPPERSSQNK 97 G+ + RS Sbjct: 62 GVLPSNSQSSRSQGPD 77 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 2/192 (1%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 + S + + L +A TL L Sbjct: 50 QNPFQAPMLAASGVLPSNSQSSRSQGPDKGERQRAKHNQMEMAFLNSVASDFYKTLR-LD 108 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 D K + + T G+ +++ D+ P+F +++ V+Q + + ++ Sbjct: 109 QDITDKPIEIQVTADGLRLTVFDRARKPVFVGNTAEFTEWGRFVMQNLSWTVDRHKFRVT 168 Query: 268 IRGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 I GHT A W LS DRA +A + L+ V I +++G+A R P Sbjct: 169 IDGHTKAQLDLGPGEYTPWELSADRANAARRALVHYAVDPALIDRVTGYADTRPVEGESP 228 Query: 327 MNSANRRIDILV 338 +N+RI + + Sbjct: 229 EAESNQRITLSL 240 >gi|145635014|ref|ZP_01790720.1| outer membrane protein P5 [Haemophilus influenzae PittAA] gi|145267622|gb|EDK07620.1| outer membrane protein P5 [Haemophilus influenzae PittAA] Length = 355 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 208 INAGISYRFGQGAAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 267 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS +RA S + GV+ D IS +G+ Sbjct: 268 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 323 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 324 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 355 >gi|330896311|gb|EGH28406.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT] Length = 384 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 82/271 (30%), Gaps = 11/271 (4%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 ++ A+ G + + S+ + K +T Sbjct: 20 QTPQSDSAATGGHWWQFGSGSDSADAGTAAKAPASSPAPAPVAKAAATPAPAAGAENSAP 79 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ S + K D K + + + + + S + Sbjct: 80 WYWPFGSNDNAQAKPDAVADKPAAKPAAPAMVAKSETDTKWWWPFGNDSSKDEPKALAMP 139 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249 + + L A E + I+ F+ L P T+ Sbjct: 140 DPKVTQAWLGEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196 Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + ++ +V+ + I GH D N ++S +RA S + SG+ +R Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRLSGLERNR 253 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337 +S+ G + A+D + NRR++IL Sbjct: 254 LSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 283 >gi|85058865|ref|YP_454567.1| peptidoglycan-associated outer membrane lipoprotein [Sodalis glossinidius str. 'morsitans'] gi|84779385|dbj|BAE74162.1| peptidoglycan-associated lipoprotein [Sodalis glossinidius str. 'morsitans'] Length = 170 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 7/141 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S + ++ + + + + + N FD L E +L L Sbjct: 33 ESAMGAGTGMDMNGNNASSDEQARLQMQELQRNNIVYFDLDKYDILSEFAQMLDAHANFL 92 Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + ++ GH D N L RA + L GV D+I I + Sbjct: 93 RSNPSYKVTVEGHADER---GTPEYNIALGERRANAVKMYLQGKGVYADQI-AIVSYGKE 148 Query: 319 RLKI--ASDPMNSANRRIDIL 337 + + + + NRR ++ Sbjct: 149 KPAVLGHDESAYAKNRRAVLV 169 >gi|303328323|ref|ZP_07358761.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. 3_1_syn3] gi|302861653|gb|EFL84589.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. 3_1_syn3] Length = 155 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 7/105 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 F PE +L+ E++ + I G+ D N L Sbjct: 47 DARVYFAFDKFNIQPEYKDMLKTKAELMKKYPSIRVRIEGNCDDR---GTQEYNLALGER 103 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 RA +AY+ L+ GV+ ++ IS + + + + + NRR Sbjct: 104 RARAAYEYLVTLGVNPSQLEMIS-YGKENPAVQGTGEAVWAKNRR 147 >gi|260062573|ref|YP_003195653.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501] gi|88784140|gb|EAR15310.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501] Length = 375 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 60/186 (32%), Gaps = 13/186 (6%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 EK+ +EE ++ I + L ++ + + + Sbjct: 194 AEKAAMREELLAALQRRQDSIRQAEEAAEQARLLQEQEEQRLAAQREEAARKAAEAARKD 253 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281 + + D F SS E L+ I + + E SI+ H D+ Sbjct: 254 ALKREL-DSIGGLRFAFDSSYLDAEAKAKLEAIAAFMKRNPELTFSIQAHADSR---GPE 309 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRI 334 + N L+ RA L G+ +R+ ++ G +L + ++ NRR Sbjct: 310 KYNQWLTERRAQRVADYLTGEGIRMERL-QVEGLGESQLLNHCSDGVRCTAAEHAVNRRG 368 Query: 335 DILVED 340 + + Sbjct: 369 VVYILA 374 >gi|330971005|gb|EGH71071.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT] Length = 317 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 82/271 (30%), Gaps = 11/271 (4%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 ++ A+ G + + S+ + K +T Sbjct: 20 QTPQSDSAATGGHWWQFGSGSESADAGTAAKAPAPSPAPAPVAKAAATPPPATGAENSAP 79 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ S S K D K S + + + + S + Sbjct: 80 WYWPFGSSDSAQAKPDAVADKPAAKPAAPSMVAKSETDTKWWWPFGNDSAKDEPKALPMP 139 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249 + + L A E + I+ F+ L P T+ Sbjct: 140 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 196 Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + ++ +V+ + I GH D N ++S +RA S + SG+ +R Sbjct: 197 GPITRLAKVVEGDQKTAVLILGHADT---SGPIEANQKISQERAQSVAAIFRLSGLERNR 253 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337 +S+ G + A+D + NRR++IL Sbjct: 254 LSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 283 >gi|167626141|ref|YP_001676435.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167356163|gb|ABZ78776.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4] Length = 304 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 85/293 (29%), Gaps = 23/293 (7%) Query: 50 VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 +++I + A Y PF K S F + S + L+ N Sbjct: 11 LIFICTNVTNSALAAPVNYQTPFEKAHWQFSGDQFGCEITHRVESFGTLSLNAKPGEALN 70 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 Q Q L + + + Q + +K+ Sbjct: 71 FALQADWLNLNNAQSQALVVPASWQAQAHQPIA--------TTSLNWFGSQAISQKNTAA 122 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + + + Q + +S+ L + +L + I + Sbjct: 123 FLEALEQGYTWQVNIQAADTSGYQISSSPVSTRLVANQFRLCRQQLLPKPFTYLRRIEL- 181 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWRL 287 +F SSS+ L + L + ++ + GH DA N L Sbjct: 182 ------LFAPSSSLLNNSHEQDLYAVYRYLQADSSIVEILVDGHADA---SGDHLANLVL 232 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 S +RA L++ GVS ++ + +++ NRR+ + + Sbjct: 233 SKERADEVVSRLIELGVSA-KMIQTRHHGTRAPVASNNNTEGRELNRRVTLRL 284 >gi|325579032|ref|ZP_08148988.1| peptidoglycan-associated lipoprotein [Haemophilus parainfluenzae ATCC 33392] gi|325159267|gb|EGC71401.1| peptidoglycan-associated lipoprotein [Haemophilus parainfluenzae ATCC 33392] Length = 155 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 + + NT F E + +L L + + + G+TD N Sbjct: 46 LQQRYNTVYFGFDKFNIEGEYVQILDAHAAYLNATPASKVVVEGNTDER---GTPEYNIA 102 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333 L RA + L GV ++S +S + + + + NRR Sbjct: 103 LGQRRADAVKGFLAGKGVDAGKVSTVS-YGEEKPAVLGHDEAAYSKNRR 150 >gi|170769100|ref|ZP_02903553.1| peptidoglycan-associated lipoprotein [Escherichia albertii TW07627] gi|170122172|gb|EDS91103.1| peptidoglycan-associated lipoprotein [Escherichia albertii TW07627] Length = 175 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 70 NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 126 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 127 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 174 >gi|26246711|ref|NP_752751.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli CFT073] gi|91209776|ref|YP_539762.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia coli UTI89] gi|237707296|ref|ZP_04537777.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia sp. 3_2_53FAA] gi|331645892|ref|ZP_08346995.1| peptidoglycan-associated lipoprotein [Escherichia coli M605] gi|26107110|gb|AAN79294.1|AE016757_198 Peptidoglycan-associated lipoprotein precursor [Escherichia coli CFT073] gi|91071350|gb|ABE06231.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli UTI89] gi|226898506|gb|EEH84765.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia sp. 3_2_53FAA] gi|331044644|gb|EGI16771.1| peptidoglycan-associated lipoprotein [Escherichia coli M605] Length = 181 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 76 NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 132 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 133 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 180 >gi|322421507|ref|YP_004200730.1| OmpA/MotB domain-containing protein [Geobacter sp. M18] gi|320127894|gb|ADW15454.1| OmpA/MotB domain protein [Geobacter sp. M18] Length = 1714 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 9/110 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI----ARDNWRLSLDR 291 F + E + +L+ + E + V GH D DN LS +R Sbjct: 114 FRTGDAEITREYLELLRGVLEKMRGRNNVRLHFVGHADTQQLHGPLQEKFGDNTGLSRER 173 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + + ++ G+ + I G + ++ NRR+++ V Sbjct: 174 AGTTAEYCQRALGLPPEAI-SYEGMGDGKPVASNSTEEGRALNRRVEVEV 222 Score = 44.6 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 67/235 (28%), Gaps = 27/235 (11%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 Q+L + + + T + L + + + S E+ Sbjct: 151 DTQQLHGPLQEKFGDNTGLSRERAGTTAEYCQRALGLPPEAISYEGMGDGKPVASNSTEE 210 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG------------ILISIID 230 A+ R+ ++ +I + + + RT + + + Sbjct: 211 GRALNRRVEVEVWYDEIGEKMVEKEVIVPAQVNRVKICRTETVCKMRYKEGLSHRVRVKN 270 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIAR----DNW 285 +D + E +++ + L + + ++D +P D Sbjct: 271 LIAPLQYDAALLTVPEEFQRQVRQTLDNLKGKQNIAVKFIAYSDTTPLEARDERIYGDQL 330 Query: 286 RLS---LDR-AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334 LS R A + L S VS + G ++D + NRR+ Sbjct: 331 GLSKAVARRVALAVQDGLKASDVS----FQSDGLGGGNPVASNDTPQGRALNRRV 381 >gi|299773237|gb|ADJ38693.1| outer membrane protein P5 [Haemophilus parasuis] Length = 362 Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 7/95 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + G+TD N LS Sbjct: 242 SDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLENPAVQVNGYTDRI---GKDAANLTLSQ 298 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 RA + ++ GV+ ++ + G+ + Sbjct: 299 KRAETVANYIVSKGVNPANVTAV-GYGEANPVTGN 332 >gi|253578401|ref|ZP_04855673.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850719|gb|EES78677.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 310 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 102/340 (30%), Gaps = 81/340 (23%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNL 76 ++K+ ++ W+ Y+D + ++ F+++ + Sbjct: 1 MRKRKKSEEG--GFNVWR-SYSDMIAGVLLLFILIMCVTLFQAQK--------------- 42 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 + SI E K ++ + + +Q + E N S Sbjct: 43 --------------------SYNESIKERDDKIALQEQYTAEILAQQSELDEKNSKLSSQ 82 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 +Q + K L + + L ++ L ++K++ ++ Sbjct: 83 DEQLDKQKKLLAE-----------------LAAQLKEQQASLDEKTSLLATQQKKIDNII 125 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI- 255 + + L + V + +++ +FD S E L I Sbjct: 126 GVKADVIEALQKEFSKNNVSVDIDAQTGALTLNAN---VLFDYDKSELTDEGKQELADIL 182 Query: 256 --------GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM---KSGV 304 + I I G+TD N LS R+ + Q L ++ + Sbjct: 183 PIYCKVLLQKDYKKYLAEIIIDGYTDTD---GDYDYNLELSQKRSLAVAQYLTEIRENFL 239 Query: 305 SEDRIS------KISGFAHHRLKIASDPMNSAN--RRIDI 336 S D IS ++G + SD + RR+++ Sbjct: 240 SSDEISELQNYLTVNGHGSANPVLDSDGNVDKDASRRVEV 279 >gi|194469803|ref|ZP_03075787.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197251258|ref|YP_002145710.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205358387|ref|ZP_02655691.2| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|238911682|ref|ZP_04655519.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194456167|gb|EDX45006.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197214961|gb|ACH52358.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205334829|gb|EDZ21593.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 174 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 69 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 125 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 126 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 173 >gi|119775220|ref|YP_927960.1| peptidoglycan-associated lipoprotein [Shewanella amazonensis SB2B] gi|119767720|gb|ABM00291.1| peptidoglycan-associated lipoprotein [Shewanella amazonensis SB2B] Length = 178 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + N FD S P + +L G L + V I GH+D N L Sbjct: 72 RENVIYFDFDRSEVSPLSADILLAHGNYLLENPSVRILIEGHSDER---GTPEYNIALGE 128 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + + L GV ++S +S + + + + NRR ++ Sbjct: 129 RRAKAVAKYLQAMGVQPAQMSIVS-YGEEKPQDLTRTDEGFSKNRRAVLV 177 >gi|300715890|ref|YP_003740693.1| peptidoglycan-associated lipoprotein Pal, OmpA family of porins [Erwinia billingiae Eb661] gi|299061726|emb|CAX58842.1| Peptidoglycan-associated lipoprotein Pal, OmpA family of porins [Erwinia billingiae Eb661] Length = 172 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 7/117 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 + + + + N F E +L L + ++ GH D Sbjct: 59 LQMQELQKNNIVYFGLDKYDIQSEFAQMLDAHANFLRSNPSYKVTVEGHADER---GTPE 115 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 N L RA + L GVS D+IS +S + + + + + NRR ++ Sbjct: 116 YNIALGERRATAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDESAYAKNRRAVLV 171 >gi|283833962|ref|ZP_06353703.1| peptidoglycan-associated lipoprotein [Citrobacter youngae ATCC 29220] gi|291070093|gb|EFE08202.1| peptidoglycan-associated lipoprotein [Citrobacter youngae ATCC 29220] Length = 172 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 67 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 123 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 124 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 171 >gi|323177269|gb|EFZ62857.1| ompA family protein [Escherichia coli 1180] Length = 127 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 19 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHAHMDGHTDNY---GEDSYNEGLSLKR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 76 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127 >gi|187921498|ref|YP_001890530.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans PsJN] gi|187719936|gb|ACD21159.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 371 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 63/187 (33%), Gaps = 17/187 (9%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + ++ E + + KRL D +K + +++ + + Sbjct: 162 QEAQRLTACSEVELIHAGHEAWTRDFDESKRLVDGVEKGTPSITAALEACTPPPTAAKVE 221 Query: 221 RTGILISIIDQRNTPMFDKSSSI-PLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPF 277 +++ FD+ LP L ++ L + +V I G+TD Sbjct: 222 PLPQKVTLQADATFK-FDRGDLAGMLPAGKAKLDELIRSLKQADDVTGISIDGYTDRL-- 278 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMNSA------ 330 N +LS RA + + L GVS + G + +D +A Sbjct: 279 -GSDSYNRQLSAKRAETVKRYLQSGGVSP--VISTRGHGKEDPVVQCNDHNRAALIACLA 335 Query: 331 -NRRIDI 336 NRR+++ Sbjct: 336 PNRRVEL 342 >gi|6977946|emb|CAB75338.1| OMP 16 protein [Pasteurella multocida] Length = 130 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 + + NT F E + +L L + + + G+TD N Sbjct: 21 LQQRYNTVYFGFDKYNIEGEYVQILDAHAAFLNATPATKVVVEGNTDER---GTPEYNIA 77 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333 L RA + L GV ++S +S + + + + NRR Sbjct: 78 LGQRRADAVKHYLSAKGVQAGQVSTVS-YGEEKPAVLGHDEAAYSKNRR 125 >gi|302338591|ref|YP_003803797.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293] gi|301635776|gb|ADK81203.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293] Length = 1410 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 14/141 (9%) Query: 215 VLFETTRTGILI---SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRG 270 VL + I SII Q N F + VL ++ E+L + G Sbjct: 1271 VLVVREGNLLKIKIASIIFQPNKAEFVEDDPEVAERNRYVLDRLAEILQKYRSYQIMVEG 1330 Query: 271 HTDASPFRNIARDNWR-------LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 H + + + LS RA + L++ G+ +R+ + G + + Sbjct: 1331 HAALINWADPVKAEREEQTELMPLSQARAEKVVEALVERGIDRNRLDAV-GVGGTKPLVP 1389 Query: 324 SD--PMNSANRRIDILVEDRQ 342 NRR++ ++E ++ Sbjct: 1390 HSDIENRWKNRRVEFILEKKR 1410 >gi|269962899|ref|ZP_06177239.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832453|gb|EEZ86572.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 305 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F L + + I+I GHTD ++ N LSL RA S Sbjct: 62 FAFDKYNIRDVDATSLNAFVHEIEGLSGRITIVGHTD---YKGSLEYNEALSLRRAQSVE 118 Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342 L + + D ++ F + +D + NRR ++ E+ Q Sbjct: 119 SFLKEK-LDPDHYDWEVKYFGETQPLALGKTDEDRAENRRAFVVFEEAQ 166 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 10/151 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 +D A+ + + A + E + I + + FD S PE + L Sbjct: 150 EDRAENRRAFVVFEEAQKYEEMPFCEPPKPDRKIYMAMTPH---FDFDESELKPEDLAKL 206 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR-ISK 311 + L I + GHTD N +L+ RA + L K+ + + + + Sbjct: 207 DSFTDKLQGLQGSILVAGHTDQI---GSLLYNEKLAQRRASEVVKYL-KTKIDPSQFLWE 262 Query: 312 ISGFAHHRLKIASDPMN--SANRRIDILVED 340 + F + I + NRR I+ ++ Sbjct: 263 VKSFGELQPVINERSKEANALNRRAFIVFKE 293 >gi|289672144|ref|ZP_06493034.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5] Length = 831 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 36/294 (12%), Positives = 88/294 (29%), Gaps = 19/294 (6%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 +E + +T S + +R++ ++ + + ++ + + + Sbjct: 540 FARLESVMLKPTADNLTRSLYLLSSIKIYQRNAPTLTTVTGIDSVEPRALPVDNRAQSVA 599 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + LS +Q+ + L +++ N + Sbjct: 600 TFGKTTLDTYLMLSKAQREQADPAVLKARIPDYWYPAIYKQVQRDTNVSAQAAGEVDDYQ 659 Query: 182 KILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 Q + L+ + + + +++ I I + +F Sbjct: 660 FAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETITLESDTLFAFG 719 Query: 241 SSIPLP---ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + L I L ++ I I GH D A+ N ++S RA + Sbjct: 720 RADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQI---GDAQSNLQVSRQRAQTI 776 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340 L+ G+ + + + G ++ + D NRR++I V Sbjct: 777 KTYLVGKGLPSELVDAV-GEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEVRA 829 >gi|224582568|ref|YP_002636366.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467095|gb|ACN44925.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|323129061|gb|ADX16491.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622475|gb|EGE28820.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627054|gb|EGE33397.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 182 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 77 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 133 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 134 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 181 >gi|50235079|gb|AAT70742.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ Q+ C T D+ + P Sbjct: 171 EVAGPVQTNGCPWPDTDKDGVLDKDHACVDVAGPAENTGCPWPDP--------------- 215 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 216 -DNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|84684131|ref|ZP_01012033.1| OmpA domain protein [Maritimibacter alkaliphilus HTCC2654] gi|84667884|gb|EAQ14352.1| OmpA domain protein [Rhodobacterales bacterium HTCC2654] Length = 315 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 9/110 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ SS T L + L + GHTDA N +S RA S Sbjct: 210 FETGSSALGDGTYDSLTDLAAYLKSHPTRRVALVGHTDAE---GPLSANIAISKRRATSV 266 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID-ILVEDR 341 + L+ GV ++ G + ++ NRR++ ILV Sbjct: 267 LERLVTAHGVPSSQLEA-EGIGYLSPLASNQSDEGRTFNRRVEAILVTTD 315 >gi|238797729|ref|ZP_04641223.1| Peptidoglycan-associated lipoprotein [Yersinia mollaretii ATCC 43969] gi|238718370|gb|EEQ10192.1| Peptidoglycan-associated lipoprotein [Yersinia mollaretii ATCC 43969] Length = 177 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277 + + + + + N F + +L L + + GH D Sbjct: 59 EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 116 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA + L GVS D+IS +S + + + + NRR Sbjct: 117 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 174 Query: 336 IL 337 ++ Sbjct: 175 LV 176 >gi|238756015|ref|ZP_04617339.1| Peptidoglycan-associated lipoprotein [Yersinia ruckeri ATCC 29473] gi|238705740|gb|EEP98133.1| Peptidoglycan-associated lipoprotein [Yersinia ruckeri ATCC 29473] Length = 167 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277 + + + + + N F + +L L + + GH D Sbjct: 49 EEQARLQMQELQKNNIVYFGFDKYDIASDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 106 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA + L GVS D+IS +S + + + + NRR Sbjct: 107 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 164 Query: 336 IL 337 ++ Sbjct: 165 LV 166 >gi|86146029|ref|ZP_01064356.1| Outer membrane protein [Vibrio sp. MED222] gi|85836234|gb|EAQ54365.1| Outer membrane protein [Vibrio sp. MED222] Length = 278 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 71/207 (34%), Gaps = 11/207 (5%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK----RKKRLQDLAKK 198 K L ++G C + ++I K+ + A ++KRL +L + Sbjct: 67 AKLHLDALIQEGARWCFPAAVVQAIEKQNRIARELQGGLLLDAANDLVIQRKRLNELEVQ 126 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + S + F + I F ++S+ P+ + L + + Sbjct: 127 LDYVTSQARCEPPKNENQFRMQLSVIEQLYDLLNVDNQFAENSTEVNPKYMGRLAEATTL 186 Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + + GH DA+ + N L+L RA + L G+ RI +S Sbjct: 187 LNKHKSLDLVVTGHADAT---GTEKFNDDLALGRAKQVERYLTIFGLGAQRIKAVS-VGE 242 Query: 318 HRLKIASDPMNSA--NRRIDILVEDRQ 342 + + NRR+ I + + Sbjct: 243 TVPLFEGESDGTRLTNRRVSIEIISPK 269 >gi|302189602|ref|ZP_07266275.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642] Length = 831 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 36/294 (12%), Positives = 88/294 (29%), Gaps = 19/294 (6%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 +E + +T S + +R++ ++ + + ++ + + + Sbjct: 540 FARLESVMLKPTADNLTRSLYLLSSIKIYQRNAPTLTTVTGIDSVEPRALPVDNRAQSVA 599 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + LS +Q+ + L +++ N + Sbjct: 600 TFGKTTLDTYLMLSKAQREQADPAVLKARIPDYWYPAIYKQVQRDTNVSAQAAGEVDDYQ 659 Query: 182 KILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 Q + L+ + + + +++ I I + +F Sbjct: 660 FAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETITLESDTLFAFG 719 Query: 241 SSIPLP---ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + L I L ++ I I GH D A+ N ++S RA + Sbjct: 720 RADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQI---GDAQSNLQVSRQRAQTI 776 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340 L+ G+ + + + G ++ + D NRR++I V Sbjct: 777 KTYLVGKGLPSELVDAV-GEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEVRA 829 >gi|261839369|gb|ACX99134.1| flagellar motor protein MotB [Helicobacter pylori 52] Length = 255 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 82/207 (39%), Gaps = 19/207 (9%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 S ++ +L + K + + + + + + K + + Sbjct: 38 SAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETK 97 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SSIPLPETIVVLQKI 255 I+ G V + I +G SI+ + +F+ + S + ++ +++I Sbjct: 98 ATIARKGEGSVLEQIDQG------------SILKLPSNLLFENATSDTINQDMMLYIERI 145 Query: 256 GEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +++ + I++RG TD +P + + ++ L+ +RAY +VL++ G + +++ Sbjct: 146 AKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLIQYGANPNQL-SF 204 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 S + +D N R++I Sbjct: 205 SSYGSTNPIAPNDSLENRMKNNRVEIF 231 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|189466239|ref|ZP_03015024.1| hypothetical protein BACINT_02610 [Bacteroides intestinalis DSM 17393] gi|189434503|gb|EDV03488.1| hypothetical protein BACINT_02610 [Bacteroides intestinalis DSM 17393] Length = 224 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 9/148 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + V+ V + ++ + +F +SS + L+++ Sbjct: 75 KMDKKAAEAAKIEGAQVEKVTDTNGLAAVKVTF---ESGILFGFNSSALSNTSKASLREL 131 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++L I GHTD N ++S DRAY+ L GVS + ++ G Sbjct: 132 AQILKEDPTTDIAIVGHTDKV---GTYEANMKVSKDRAYTVENYLQDCGVSPAQFKQVEG 188 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 +++ S NRR+DI + + Sbjct: 189 VGYNQ--YDDSMTASQNRRVDIYMYASE 214 >gi|238793898|ref|ZP_04637518.1| Peptidoglycan-associated lipoprotein [Yersinia intermedia ATCC 29909] gi|238726801|gb|EEQ18335.1| Peptidoglycan-associated lipoprotein [Yersinia intermedia ATCC 29909] Length = 177 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277 + + + + + N F + +L L + + GH D Sbjct: 59 EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 116 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA + L GVS D+IS +S + + + + NRR Sbjct: 117 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 174 Query: 336 IL 337 ++ Sbjct: 175 LV 176 >gi|107026300|ref|YP_623811.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116692511|ref|YP_838044.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia HI2424] gi|170738239|ref|YP_001779499.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia MC0-3] gi|105895674|gb|ABF78838.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116650511|gb|ABK11151.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424] gi|169820427|gb|ACA95009.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia MC0-3] Length = 163 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD PE +LQ + L I+G+TD + N L R+ + Sbjct: 62 FDFDQYSVKPEFQSLLQAHADYLRSHPARRVLIQGNTDER---GTSEYNLALGQRRSQAV 118 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 L GV ++ +S + + + NRR D++ Sbjct: 119 ASALETLGVPATQLEAVS-LGKEKPVALGHDEEAWAQNRRADLV 161 >gi|46201524|ref|ZP_00054848.2| COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Magnetospirillum magnetotacticum MS-1] Length = 114 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + +L + E L ++ + +I GH D N L RA + Sbjct: 11 FDSDRLDLNAKAKAILDGVAEELKRNSTLTAILAGHADDR---GSREYNLALGERRAEAV 67 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 L G +R++ IS + + + S + NRR+ + +E Sbjct: 68 KTYLAVHGAPVERMAAIS-YGKEQPRDTSGTKAARAANRRVVVRLEQ 113 >gi|262149046|ref|ZP_06028189.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae INDRE 91/1] gi|262031146|gb|EEY49767.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae INDRE 91/1] Length = 133 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + T F ++ + +L L + ++I GH D N L Sbjct: 27 ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADER---GTPEYNIALGE 83 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV ++S +S + + + + NRR ++ Sbjct: 84 RRAQAVAKYLEALGVQAGQLSIVS-YGEEKPLVLGQSEEAYAKNRRAVLV 132 >gi|212637766|ref|YP_002314291.1| OmpA protein [Shewanella piezotolerans WP3] gi|212559250|gb|ACJ31704.1| OmpA [Shewanella piezotolerans WP3] Length = 301 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 8/107 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAY 293 +FD SSS L + + + + + GH DA N LS +RA Sbjct: 182 LFDTSSSHLNTVHSKDLVAVSRYIEADSTIAEVLIDGHADA---SGNRIANLVLSKERAD 238 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +L++ GV R+ ++ A++ NRR+ I + Sbjct: 239 EVASMLIELGVPA-RMIQVRHHGTRAPIAANNNQQGRELNRRVSIRL 284 >gi|149371333|ref|ZP_01890819.1| outer membrane protein A [unidentified eubacterium SCB49] gi|149355471|gb|EDM44030.1| outer membrane protein A [unidentified eubacterium SCB49] Length = 560 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 13/108 (12%) Query: 240 SSSIPLPETIVVLQKI-GEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ + ++ VLA + V I HTD+ N LS RA + Sbjct: 454 GSATLTAQAKNIIDTRLMPVLAQNPGVKLEIASHTDSR---GGKAANQDLSERRAQAVAV 510 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 L G++ + +GF RL ++ ++ANRR + + Sbjct: 511 YLQSKGINNSLLVA-NGFGETRLLNRCADGVSCTEKEHAANRRTEFRL 557 >gi|54302262|ref|YP_132255.1| putative outer membrane protein [Photobacterium profundum SS9] gi|46915683|emb|CAG22455.1| putative outer membrane protein [Photobacterium profundum SS9] Length = 196 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 9/167 (5%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 E+ ++ + +D AD ++ + + +F Sbjct: 21 EEPPIAEQSQDQRDFDNDGVINARDKCADTPHSAIVDNDGCPIRVNREEENDVRVLFAND 80 Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ + +Q++ + L E I ++G+ A N LS RA + L Sbjct: 81 SAAIPEAFLSEIQRMADFLEIYPETYIELKGYASPV---GNAEYNIGLSKRRATKVREQL 137 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVEDRQG 343 + GV+ RI I GF A + + N RR+ V +G Sbjct: 138 IAEGVAPQRIKTI-GFGDAEPIAA-ESSEATNTLSRRVVARVIGSKG 182 >gi|148265117|ref|YP_001231823.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4] gi|146398617|gb|ABQ27250.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4] Length = 1700 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 25/186 (13%), Positives = 55/186 (29%), Gaps = 9/186 (4%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + + + + + Q L + Sbjct: 24 AETAPAETVKTAAGTREAAASGETTETHLPKDQALTPWLLDPSVFAEDQGDRTEKRRVAE 83 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD----AS 275 + I + + F + E + +L+ + E + V GH D + Sbjct: 84 KEVKTIKLANVVPPIRFRTGEADIPDEYVALLRGVLEKMRGRLNVRLHFVGHADPQSLSD 143 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPM--NSANR 332 P + DN LS +RA + + ++ G+ + I G + + + NR Sbjct: 144 PLKAKYGDNTGLSRERAGTTAEYCQRALGLPPEAI-SYEGVGESKPVAGNATEDGRALNR 202 Query: 333 RIDILV 338 R+++ V Sbjct: 203 RVEVEV 208 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 27/237 (11%), Positives = 71/237 (29%), Gaps = 27/237 (11%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 Q L + + + + T + L + E+ + + E Sbjct: 137 DPQSLSDPLKAKYGDNTGLSRERAGTTAEYCQRALGLPPEAISYEGVGESKPVAGNATED 196 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR------------TGILISIID 230 A+ R+ ++ +I + + + R + + + Sbjct: 197 GRALNRRVEVEVWYDEIGEKMVEKDVIVSRQVNRVKVCRTETVCKMRYKEGHSHRVRVKN 256 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR----DNW 285 +D + E + +++ L ++ ++D +P D Sbjct: 257 LIAPMHYDAAMVTVPEEFLQQIRQALINLRGKENIVVKFIAYSDNAPLEGRDERIYGDQA 316 Query: 286 RLS---LDR-AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 LS R A + + L ++ V+ + G + ++D + NRR+++ Sbjct: 317 GLSKAVARRVALAVHDGLKEANVA----VESDGKGASQPVASNDTTQGRAMNRRVEV 369 >gi|319902507|ref|YP_004162235.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] gi|319417538|gb|ADV44649.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] Length = 223 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 9/148 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + V+ + + +S +F +S+ + L+ + Sbjct: 74 KMDKKAAEAAKIEGAQVEQITDSNGLPAVKVSF---AAGILFGFNSAALSNDAKASLRDL 130 Query: 256 GEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++L ST I+I GHTD N ++S +RAYS L GVS + K+ G Sbjct: 131 AQILKDDSTTDIAIIGHTDKV---GTYEANMKVSKNRAYSVENYLQDCGVSPAQFKKVEG 187 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 + + NRR+++ + + Sbjct: 188 VGYAQ--YDESKTADQNRRVEVYMYASE 213 >gi|258622513|ref|ZP_05717535.1| lateral flagellar MotY-like protein [Vibrio mimicus VM573] gi|258585213|gb|EEW09940.1| lateral flagellar MotY-like protein [Vibrio mimicus VM573] Length = 358 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 8/136 (5%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISI 268 V E + D+ F E + L+ + + + + Sbjct: 207 NQSTVQREQLPKMPFLDTRDREVVIYFAFGQRTLSNEQKMRLRALYRYIVEDSRVNKVLV 266 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM- 327 G+TD + N +S RA + L + G++E+++ ++ ++D Sbjct: 267 DGYTDNV---GPSVANLTISRQRAELIAKELNRLGLAEEKV-EVRAHGLRYPVASNDTAT 322 Query: 328 -NSANRRIDILVEDRQ 342 + NRR+ + + Sbjct: 323 GQAKNRRVTLRLVRDN 338 >gi|238763376|ref|ZP_04624340.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638] gi|238698475|gb|EEP91228.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638] Length = 358 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + S E L ++ L+ + + G D N LS Sbjct: 230 KSDVLFAFNKSTLKAEGQQALDQLYSQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 286 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+I+ G + P + +RR++I Sbjct: 287 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 345 Query: 338 VED 340 V+ Sbjct: 346 VKG 348 >gi|218666977|ref|YP_002427062.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218519190|gb|ACK79776.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 183 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +SS + I VL L H T ++ ++G+ + + N LS +RA S Sbjct: 74 FTTNSSKLMTADIAVLDSAARFALKHPTAILLVKGYCSKT---GSYKYNLGLSQERAASV 130 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 LM GV RI G++ ++ N+R+ I Sbjct: 131 AHYLMGRGVPNYRIIT-RGYSWEDPVASNATREGRFLNQRVVI 172 >gi|217973703|ref|YP_002358454.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS223] gi|217498838|gb|ACK47031.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS223] Length = 178 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 +++ FD S + +L+ G L V I GH D N L Sbjct: 72 KQHIIYFDFDRSEVQTDFAAILEAHGTYLVEHPSVRVLIEGHADER---GTPEYNIALGE 128 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV ++ + + + S NRR ++ Sbjct: 129 RRAKAVAKYLQGMGVQPTQM-SVVSYGEEKPLDFSRTDEGFGKNRRAVLV 177 >gi|198284396|ref|YP_002220717.1| OmpA/MotB domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248917|gb|ACH84510.1| OmpA/MotB domain protein [Acidithiobacillus ferrooxidans ATCC 53993] Length = 184 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +SS + I VL L H T ++ ++G+ + + N LS +RA S Sbjct: 75 FTTNSSKLMTADIAVLDSAARFALKHPTAILLVKGYCSKT---GSYKYNLGLSQERAASV 131 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 LM GV RI G++ ++ N+R+ I Sbjct: 132 AHYLMGRGVPNYRIIT-RGYSWEDPVASNATREGRFLNQRVVI 173 >gi|153832533|ref|ZP_01985200.1| peptidoglycan-associated lipoprotein [Vibrio harveyi HY01] gi|148871328|gb|EDL70200.1| peptidoglycan-associated lipoprotein [Vibrio harveyi HY01] Length = 173 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + +L L+ + ++I GH D N L RA + Sbjct: 73 FAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADER---GTPEYNIALGERRAEAV 129 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L GV D+IS +S + + + + NRR ++ Sbjct: 130 SNYLQALGVQADQISIVS-YGEEKPLLLGQSEEVYAKNRRAVLV 172 >gi|222824332|ref|YP_002575906.1| flagellar motor component MotB [Campylobacter lari RM2100] gi|222539553|gb|ACM64654.1| flagellar motor component MotB [Campylobacter lari RM2100] Length = 244 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 74/189 (39%), Gaps = 26/189 (13%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 L K +++ + N + L K K L++ +++ ++ L + + +V + Sbjct: 60 ASNPLEKESEVHNKYSAPSNANVEELEKLKKLSITQQENIEKLKAALDQRENNIVLNLPA 119 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--G 270 + E R + I+ D ++ L++I EVL + I G Sbjct: 120 R---VEFARASVEINSADVQD-----------------FLKRISEVLKRMPKQAQIELRG 159 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 +TDAS + N+ L+ RA L+ G++ ++ +S F + A+ Sbjct: 160 YTDASDK--DPKRNFDLASKRAQVVADYLIARGINPAQLIVVS-FGENYPLSANKEDE-I 215 Query: 331 NRRIDILVE 339 N R++ + Sbjct: 216 NNRVEFYIR 224 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 73/185 (39%), Gaps = 5/185 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY----FNPFGK 74 KK + P W + YADF+++L+A F+ +W I+ ++ +A++ F Sbjct: 3 KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISESNPAKTEALKTEFVKIFEFTAS 61 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 N + + ++ + P ++ +++ IT+ K+ + +++ + N + Sbjct: 62 NPLEKESEVHNKYSAPSNANVEELEKLKKLSITQQENIEKLKAALDQRENNIVLNLPARV 121 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 ++ S ++ +D K +++ + Y K KR Q Sbjct: 122 EFARASVEINSADVQDFLKRISEVLKRMPKQAQIELRGYTDASDKDPKRNFDLASKRAQV 181 Query: 195 LAKKI 199 +A + Sbjct: 182 VADYL 186 >gi|187922763|ref|YP_001894405.1| peptidoglycan-associated lipoprotein [Burkholderia phytofirmans PsJN] gi|187713957|gb|ACD15181.1| peptidoglycan-associated lipoprotein [Burkholderia phytofirmans PsJN] Length = 169 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + +LQ+ + L + + I+G+TD + N L RA + Sbjct: 67 FDFDSYSVKDDYQSLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV++ ++ +S + + + + NRR D++ Sbjct: 124 RRSLSLMGVTDSQMEAVS-LGKEKPQATGHDESSWAQNRRADLV 166 >gi|85708814|ref|ZP_01039880.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1] gi|85690348|gb|EAQ30351.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1] Length = 378 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 FD S + +L A+ + + GHTD N L+ Sbjct: 267 PYIVFFDFDESAITADAATILDNAITAYANCGMARVMLAGHTDR---SGSVSYNMALAER 323 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 R S + + G+ RI F + ++ + NRR+++ Sbjct: 324 RNMSVMEYMTGRGIPAARIM-GEAFGESQPRVPTADGVRELQNRRVEVT 371 >gi|254299066|ref|ZP_04966516.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 406e] gi|157809033|gb|EDO86203.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 406e] Length = 169 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + + FD S + +LQ+ + L + I I+G+TD + N L Sbjct: 62 KRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDER---GTSEYNLALGQK 118 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + + L GV + ++ +S + + + NRR D++ Sbjct: 119 RAEAVRRALSLLGVGDAQMEAVS-LGKEKPVALGHDEASWAQNRRADLV 166 >gi|148252154|ref|YP_001236739.1| hypothetical protein BBta_0555 [Bradyrhizobium sp. BTAi1] gi|146404327|gb|ABQ32833.1| hypothetical protein BBta_0555 [Bradyrhizobium sp. BTAi1] Length = 212 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD +S+ +++ +Q +G L + GHTDA N LS RA Sbjct: 102 FDYNSANISQKSLASVQALGRALTSPDLKGSTFVVAGHTDA---AGGDAYNQDLSERRAD 158 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 S + L++ G++ + + G+ +LK S P+ NRR+ ++ Sbjct: 159 SIKRYLVEKFGIAGADLVTV-GYGKSKLKDPSQPLAEVNRRVQVV 202 >gi|322435205|ref|YP_004217417.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] gi|321162932|gb|ADW68637.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] Length = 281 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 7/116 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 FD S P+ + ++ I + G+ D A N Sbjct: 170 FHAAVQDVFFDYDSIELRPDGQTAAVQAATYMSQHPNLHILVGGYCDER---GSAEYNLA 226 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 L +RA +A L+ +GV+ +RI IS + + ++ NRR ++ Sbjct: 227 LGENRANAAKTALVNAGVAANRIRTIS-YGKEKQFCTEANEACWQQNRRAQFSIDR 281 >gi|153838882|ref|ZP_01991549.1| outer membrane protein [Vibrio parahaemolyticus AQ3810] gi|149747673|gb|EDM58587.1| outer membrane protein [Vibrio parahaemolyticus AQ3810] Length = 206 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 7/177 (3%) Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 ++ ++ LQD L + + + Sbjct: 17 QQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAGSEVDNDGCGEYIKASE 76 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLS 288 + +F S P ++++ E L I ++G+ + ++ N LS Sbjct: 77 KMQVRVLFANDSDEINPVFRRQIRELSEFLKDYPTTSIELQGYASKT---GGSKHNQDLS 133 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343 RA + L+ G+ +R+ +I GF L ++ NRR+ V +G Sbjct: 134 ERRAKNVRDALLGYGIEPNRV-RIIGFGDTHLAEQGTDQVSHALNRRVTASVVGYKG 189 >gi|148826224|ref|YP_001290977.1| outer membrane protein P5 [Haemophilus influenzae PittEE] gi|148716384|gb|ABQ98594.1| Outer membrane protein P5 [Haemophilus influenzae PittEE] Length = 238 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 16/152 (10%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ ++ +G ++ + F + P+ L I ++ Sbjct: 91 INAGISYRFGQGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQV 150 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS +RA S + GV+ D IS +G+ Sbjct: 151 KSAKVAVAGYTDRI---GSDAFNVKLSQERADSVANYFVAKGVAADAISA-TGYGKANPV 206 Query: 322 --IASDPMNSA---------NRRIDILVEDRQ 342 D + +RR++I V + Sbjct: 207 TGATCDQVKGRKALIACLAPDRRVEIAVNGTK 238 >gi|283784494|ref|YP_003364359.1| peptidoglycan-associated lipoprotein [Citrobacter rodentium ICC168] gi|282947948|emb|CBG87512.1| peptidoglycan-associated lipoprotein [Citrobacter rodentium ICC168] Length = 173 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 68 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 172 >gi|237729519|ref|ZP_04560000.1| OmpA family protein [Citrobacter sp. 30_2] gi|226908125|gb|EEH94043.1| OmpA family protein [Citrobacter sp. 30_2] Length = 160 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +T +FDK+ PE+ ++++ LA + + GHTD N LSL R Sbjct: 52 DTILFDKNDYKLRPESEKQIKEMASKLAATGLNHARLDGHTDNY---GEDSYNEALSLKR 108 Query: 292 AYSAYQ-VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A + + ++ G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAQGANIPRTNLTT-QGLGKKYPIASNQTSKGRAENRRVAVVITTP 160 >gi|53804447|ref|YP_113694.1| OmpA family protein [Methylococcus capsulatus str. Bath] gi|53758208|gb|AAU92499.1| OmpA family protein [Methylococcus capsulatus str. Bath] Length = 215 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS LPE + ++ LA +++ GH D N L RA S Sbjct: 112 FGYDSSEVLPEYVPIVNAHAAYLASHPNVTVTLEGHCDER---GSPEYNIALGEQRARSI 168 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + G S+ ++ +S F + + + NRR++I+ Sbjct: 169 ANTMRFQGASDGQMQIVS-FGEEKPADPGSGEAAWAKNRRVEIV 211 >gi|238790499|ref|ZP_04634268.1| Peptidoglycan-associated lipoprotein [Yersinia frederiksenii ATCC 33641] gi|238721443|gb|EEQ13114.1| Peptidoglycan-associated lipoprotein [Yersinia frederiksenii ATCC 33641] Length = 168 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277 + + + + + N F + +L L + + GH D Sbjct: 50 EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 107 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA + L GVS D+IS +S + + + + NRR Sbjct: 108 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 165 Query: 336 IL 337 ++ Sbjct: 166 LV 167 >gi|308094644|ref|ZP_05890943.2| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|308095659|ref|ZP_05907392.2| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|308126475|ref|ZP_05910381.2| outer membrane protein [Vibrio parahaemolyticus AQ4037] gi|308087973|gb|EFO37668.1| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|308091063|gb|EFO40758.1| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|308107721|gb|EFO45261.1| outer membrane protein [Vibrio parahaemolyticus AQ4037] Length = 284 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 7/158 (4%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +++RL L +++ L+ + F S+ P+ Sbjct: 102 QRRRLNQLEQQLDYVLTQTTCTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPK 161 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + L + +L + + GH D N +L+ +RA + L GV+ Sbjct: 162 YMGHLAEAAYILRDHPALSLVVTGHAD---VTGTPEHNKKLAQERAEQVKRYLSVFGVTS 218 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 DR+ NRR+ I V Sbjct: 219 DRVQT-KSVGDTLPLYEGQTPAVRLTNRRVSIEVLSAN 255 >gi|170691332|ref|ZP_02882497.1| peptidoglycan-associated lipoprotein [Burkholderia graminis C4D1M] gi|170143537|gb|EDT11700.1| peptidoglycan-associated lipoprotein [Burkholderia graminis C4D1M] Length = 169 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + +LQ+ + L + + I+G+TD + N L RA + Sbjct: 67 FDFDSYSVKDDYQSLLQQHSQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV++ ++ +S + + + + NRR D++ Sbjct: 124 RRSLSLMGVTDSQMEAVS-LGKEKPQATGHDESSWAQNRRADLV 166 >gi|161504089|ref|YP_001571201.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865436|gb|ABX22059.1| hypothetical protein SARI_02187 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 174 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 69 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 125 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 126 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 173 >gi|325286811|ref|YP_004262601.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324322265|gb|ADY29730.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 643 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 18/185 (9%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 E S E + + K + KK S A+ + +++ Sbjct: 457 ELESAEDGSYEIEVPWQEKITIIASKKKYSLFRQFYTAEELKNKKQTPIYLDFADDFVVE 516 Query: 231 QRNTPM-------FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 + M F SS P+ I L K ++ E I HTD+ + + Sbjct: 517 KEGKSMLKLNKFIFKTKSSKLTPDIIKELDKAITIIKKFPEFNLQIESHTDS---KGGSS 573 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRRID 335 N+R+S RA + + L+ +G+ I G+ + D ++ NRR + Sbjct: 574 SNFRISQARADNIKKYLLNNGIPSKNILYTIGYGEDHVLNKCVNGVYCIDYFHAENRRCN 633 Query: 336 ILVED 340 I+V + Sbjct: 634 IVVLN 638 >gi|260429336|ref|ZP_05783313.1| OmpA domain protein [Citreicella sp. SE45] gi|260419959|gb|EEX13212.1| OmpA domain protein [Citreicella sp. SE45] Length = 304 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 7/146 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + + + F+ S+ T+ L+++ L Sbjct: 163 ETPSETPAPQQTPEAIPGGEIAARLEREGHVILRDLSFETGSASLGETTVSSLEELAAFL 222 Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 A + + + GHTDA N LS RA +A L G+ ++ G + Sbjct: 223 TADPSRRVLLVGHTDAV---GSLAANTELSRKRAAAAESYLRARGIPAGQLGA-QGAGYL 278 Query: 319 RLKIASDPMNSA--NRRIDILVEDRQ 342 ++ NRRI+ ++ + Sbjct: 279 SPVASNLTPEGREENRRIEAILLPSE 304 >gi|153831565|ref|ZP_01984232.1| OmpA family protein [Vibrio harveyi HY01] gi|148872075|gb|EDL70892.1| OmpA family protein [Vibrio harveyi HY01] Length = 297 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 10/151 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 +D A+ + + A + E + I + + FD S PE + L Sbjct: 150 EDRAENRRAYVVFEEAQKYEEMPFCEPPKPDRKIYMAMTPH---FDFDKSQLKPEDLAKL 206 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR-ISK 311 + L I + GHTD N +L+ RA + L K+ + + + + Sbjct: 207 DSFTDKLQGLQGSILVAGHTDQI---GSLSYNEKLAQRRASEVVKYL-KTKIDPSQFLWE 262 Query: 312 ISGFAHHRLKIASDPMN--SANRRIDILVED 340 + F + I + NRR I+ ++ Sbjct: 263 VKSFGELQPAIDERSKEANALNRRAFIVFKE 293 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 7/100 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F L + + I+I GHTD ++ N LSL RA S Sbjct: 62 FAFDKYNIRDVDATSLNAFVHEIEGLSGRITIVGHTD---YKGSLEYNEALSLRRAQSVE 118 Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKI--ASDPMNSANRR 333 L + + D ++ F + +D + NRR Sbjct: 119 SFLKEK-LDPDHYDWEVKYFGETQPLALGKTDEDRAENRR 157 >gi|118475629|ref|YP_892653.1| Omp18 [Campylobacter fetus subsp. fetus 82-40] gi|118414855|gb|ABK83275.1| Omp18 [Campylobacter fetus subsp. fetus 82-40] Length = 173 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 49/145 (33%), Gaps = 9/145 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 ++ +S + + ++ I Q FD P+ V+ + Sbjct: 32 ANKMSNNNGMSNTDTMSDAERLNALMNQIQSQVKNVYFDFDKFNIRPDMQGVVGTNASLF 91 Query: 260 AHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + I + G+ D N+ L + RA +A L+ GVS DRI +I+ Sbjct: 92 NQNGADSLRIMVEGNCDEW---GSDEYNYALGVKRAKTAKDALVAQGVSADRI-EITSNG 147 Query: 317 HHRLKIASDPMN--SANRRIDILVE 339 + + NRR + + Sbjct: 148 ESKPVCTERTKACDAQNRRDEFKIL 172 >gi|16759688|ref|NP_455305.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764119|ref|NP_459734.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142539|ref|NP_805881.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414134|ref|YP_151209.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179323|ref|YP_215740.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615017|ref|YP_001588982.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167554283|ref|ZP_02348024.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167995342|ref|ZP_02576432.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168238899|ref|ZP_02663957.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240607|ref|ZP_02665539.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264359|ref|ZP_02686332.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467688|ref|ZP_02701525.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820116|ref|ZP_02832116.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444000|ref|YP_002039990.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450609|ref|YP_002044783.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194735900|ref|YP_002113856.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197263376|ref|ZP_03163450.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363056|ref|YP_002142693.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198245566|ref|YP_002214719.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390868|ref|ZP_03217479.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929814|ref|ZP_03220835.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352013|ref|YP_002225814.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856193|ref|YP_002242844.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213027105|ref|ZP_03341552.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213051768|ref|ZP_03344646.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213423403|ref|ZP_03356390.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213427708|ref|ZP_03360458.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582020|ref|ZP_03363846.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609989|ref|ZP_03369815.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213649745|ref|ZP_03379798.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213857528|ref|ZP_03384499.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289827212|ref|ZP_06545932.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25298548|pir||AI0592 peptidoglycan-associated lipoprotein precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419259|gb|AAL19693.1| tol protein required for outer membrane integrity [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501981|emb|CAD05211.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29138170|gb|AAO69741.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128391|gb|AAV77897.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62126956|gb|AAX64659.1| tol protein required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA to cytoplasm [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364381|gb|ABX68149.1| hypothetical protein SPAB_02777 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402663|gb|ACF62885.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408913|gb|ACF69132.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194711402|gb|ACF90623.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195629206|gb|EDX48574.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094533|emb|CAR60053.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197241631|gb|EDY24251.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288314|gb|EDY27695.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940082|gb|ACH77415.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603313|gb|EDZ01859.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320808|gb|EDZ06009.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271794|emb|CAR36628.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205321482|gb|EDZ09321.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205326989|gb|EDZ13753.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205340301|gb|EDZ27065.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343044|gb|EDZ29808.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347158|gb|EDZ33789.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707996|emb|CAR32285.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246012|emb|CBG23814.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992490|gb|ACY87375.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157340|emb|CBW16829.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911776|dbj|BAJ35750.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085020|emb|CBY94809.1| Peptidoglycan-associated lipoprotein Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226328|gb|EFX51379.1| 18K peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615817|gb|EFY12735.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621376|gb|EFY18232.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623633|gb|EFY20471.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628905|gb|EFY25686.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634885|gb|EFY31615.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636587|gb|EFY33291.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322647828|gb|EFY44308.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651360|gb|EFY47742.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652661|gb|EFY49010.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658642|gb|EFY54903.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664929|gb|EFY61120.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668402|gb|EFY64558.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670510|gb|EFY66643.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675250|gb|EFY71326.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679676|gb|EFY75717.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684848|gb|EFY80847.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713794|gb|EFZ05365.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323191723|gb|EFZ76976.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200617|gb|EFZ85692.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202288|gb|EFZ87336.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205443|gb|EFZ90409.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212129|gb|EFZ96954.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216148|gb|EGA00877.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221361|gb|EGA05780.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226784|gb|EGA10975.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230998|gb|EGA15114.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234169|gb|EGA18258.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238136|gb|EGA22194.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243571|gb|EGA27589.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247404|gb|EGA31363.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251393|gb|EGA35265.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256484|gb|EGA40216.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260623|gb|EGA44232.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264694|gb|EGA48196.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270958|gb|EGA54393.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332987686|gb|AEF06669.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 174 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 69 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 125 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 126 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 173 >gi|293397221|ref|ZP_06641494.1| peptidoglycan-associated lipoprotein [Serratia odorifera DSM 4582] gi|291420241|gb|EFE93497.1| peptidoglycan-associated lipoprotein [Serratia odorifera DSM 4582] Length = 179 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277 + + + + + N F E +L L ++ ++ GH D Sbjct: 61 EEQARLQMQELQKNNIVYFGLDKYDISSEFAQMLDAHATFLRNNPSYKVTVEGHADER-- 118 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRID 335 N L RA + L GVS D+IS +S + + + + NRR Sbjct: 119 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAV 176 Query: 336 IL 337 ++ Sbjct: 177 LV 178 >gi|262394173|ref|YP_003286027.1| outer membrane protein [Vibrio sp. Ex25] gi|262337767|gb|ACY51562.1| outer membrane protein [Vibrio sp. Ex25] Length = 204 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 7/177 (3%) Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 ++ + + ++ LQD + +G + G I Sbjct: 17 QQVAAEDEYDYRPVPSAEQIADLQDEDNDGVINARDMCP-GTPEGSEVDNDGCGEYIKAS 75 Query: 230 DQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS 288 D +F S P ++++ + L SI H AS N LS Sbjct: 76 DNMQVRILFANDSDEINPVFRRQVRELSDFLKEYP-TTSIELHGYASKVGGSQ-HNQDLS 133 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343 RA + + L+ + R+ +I GF L + ++ NRR+ V +G Sbjct: 134 ERRARNVREALLSYNIEPSRV-RIVGFGDTHLAQQGTDEVSHALNRRVTASVVGYKG 189 >gi|315058013|gb|ADT72342.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni S3] Length = 317 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 99/321 (30%), Gaps = 52/321 (16%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+++ + + + Sbjct: 12 W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151 + + ++ +L+ K L N L+ + Q + ++T Sbjct: 45 KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK 104 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208 + KDL + D + L +E + ++ ++ + I L + Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLIKELQ 164 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258 + + + I + +FDK S + E L+K Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316 + + E I I GHTD+ N LS RAY + S+ ++ SG + Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276 Query: 317 HHRLKIASDPMN-SANRRIDI 336 + + +RRI+I Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297 >gi|237730722|ref|ZP_04561203.1| peptidoglycan-associated outer membrane lipoprotein [Citrobacter sp. 30_2] gi|226906261|gb|EEH92179.1| peptidoglycan-associated outer membrane lipoprotein [Citrobacter sp. 30_2] Length = 180 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 75 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 131 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 132 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 179 >gi|322433237|ref|YP_004210458.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] gi|321165629|gb|ADW71331.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] Length = 438 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 7/111 (6%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDN 284 + + +FD S+ P+ V ++ G+ L ++ I G+ D A N Sbjct: 325 VIFHENVQDALFDYDSAEIRPDAKVAIEHAGKFLTEHPDIQVLIEGYADDR---GSAEYN 381 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333 L RA +A LM+ G+ +R+ IS + NRR Sbjct: 382 LGLGAQRASAARTALMEQGIPPERLKIIS-YGKEAQVCVQQTEQCWQQNRR 431 >gi|218511064|ref|ZP_03508942.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5] Length = 106 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 6/101 (5%) Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 SS P+ +LQK+ V+ I I GHTDA AR N LS+ RA Sbjct: 6 AFDSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDA---SGGARYNQNLSMLRAREVA 62 Query: 297 QVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + + + +R+ + G P NRR++ Sbjct: 63 RFFTEDCHIPPERLEAV-GVGEQFPLDPQKPKADENRRVEF 102 >gi|90410854|ref|ZP_01218869.1| Putative sodium-type flagellar protein MotY [Photobacterium profundum 3TCK] gi|90328485|gb|EAS44783.1| Putative sodium-type flagellar protein MotY [Photobacterium profundum 3TCK] Length = 296 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 4/104 (3%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 +D S + L +I + + +S ++ + T + N LS RA Sbjct: 190 YDMDSDELNKPSQRRLAQITDFVRYSDDIDLVLLATYSDSTGGTKV-NQSLSERRAKKLE 248 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + M G+ ++RI ++ + R +D + NRR+ I + Sbjct: 249 EYFMSLGLPKNRI-QVEAYGKRRPIADNDTPIGRNKNRRVVISL 291 >gi|86747447|ref|YP_483943.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] gi|86570475|gb|ABD05032.1| OmpA/MotB [Rhodopseudomonas palustris HaA2] Length = 651 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285 NT F+ S P+ LQ I + L EV I GHTDA DN Sbjct: 519 DLNTITFETGSWDIPPDQAAKLQVIADGLNRAIQRNPREVFLIEGHTDAV---GNDTDNL 575 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA SA +L + GV + ++ G+ LK+ +D NRR+ + Sbjct: 576 SLSDRRAESAATLLTQQFGVPAENLTS-QGYGEQYLKVPTDGPERQNRRVTV 626 >gi|91781922|ref|YP_557128.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans LB400] gi|296162179|ref|ZP_06844975.1| peptidoglycan-associated lipoprotein [Burkholderia sp. Ch1-1] gi|91685876|gb|ABE29076.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans LB400] gi|295887565|gb|EFG67387.1| peptidoglycan-associated lipoprotein [Burkholderia sp. Ch1-1] Length = 169 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + +LQ+ + L + + I+G+TD + N L RA + Sbjct: 67 FDFDSYSVKDDYQSLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV++ ++ +S + + + + NRR D++ Sbjct: 124 RRSLSLMGVTDSQMEAVS-LGKEKPQATGHDESSWAQNRRADLV 166 >gi|225350128|gb|ACN87974.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGVFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|220918574|ref|YP_002493878.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956428|gb|ACL66812.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 242 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S PE+ LQK+ + L + ++G+ D A+ N L RA SA Sbjct: 141 FAFDRSNLTPESQQNLQKLADCLKQAPAKRVLVQGNCDER---GTAQYNVALGNRRAESA 197 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 + L GVS + +S + + + S NRR D +E Sbjct: 198 KKYLTDLGVSSS-VDTVS-YGEEKPVCSEATEACWSKNRRDDFQIER 242 >gi|53720375|ref|YP_109361.1| OmpA family lipoprotein [Burkholderia pseudomallei K96243] gi|53725632|ref|YP_103661.1| OmpA family outer membrane protein [Burkholderia mallei ATCC 23344] gi|67643927|ref|ZP_00442670.1| outer membrane lipoprotein [Burkholderia mallei GB8 horse 4] gi|76810557|ref|YP_334629.1| OmpA family outer membrane protein [Burkholderia pseudomallei 1710b] gi|121601549|ref|YP_992166.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei SAVP1] gi|124383503|ref|YP_001028612.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei NCTC 10229] gi|126440722|ref|YP_001060216.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 668] gi|126451181|ref|YP_001081487.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei NCTC 10247] gi|126454443|ref|YP_001067480.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 1106a] gi|134280344|ref|ZP_01767055.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 305] gi|166998277|ref|ZP_02264137.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei PRL-20] gi|167720991|ref|ZP_02404227.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei DM98] gi|167739948|ref|ZP_02412722.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 14] gi|167817185|ref|ZP_02448865.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 91] gi|167825598|ref|ZP_02457069.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 9] gi|167847082|ref|ZP_02472590.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei B7210] gi|167895666|ref|ZP_02483068.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 7894] gi|167904059|ref|ZP_02491264.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei NCTC 13177] gi|167912316|ref|ZP_02499407.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 112] gi|167920273|ref|ZP_02507364.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei BCC215] gi|217420588|ref|ZP_03452093.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 576] gi|226194168|ref|ZP_03789767.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei Pakistan 9] gi|237813606|ref|YP_002898057.1| outer membrane lipoprotein [Burkholderia pseudomallei MSHR346] gi|242315175|ref|ZP_04814191.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 1106b] gi|254175608|ref|ZP_04882268.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei ATCC 10399] gi|254180823|ref|ZP_04887421.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 1655] gi|254191661|ref|ZP_04898164.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei Pasteur 52237] gi|254194825|ref|ZP_04901255.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei S13] gi|254202358|ref|ZP_04908721.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei FMH] gi|254207692|ref|ZP_04914042.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei JHU] gi|254258391|ref|ZP_04949445.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 1710a] gi|254356406|ref|ZP_04972682.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei 2002721280] gi|52210789|emb|CAH36773.1| putative OmpA family lipoprotein [Burkholderia pseudomallei K96243] gi|52429055|gb|AAU49648.1| outer membrane protein, OmpA family [Burkholderia mallei ATCC 23344] gi|76580010|gb|ABA49485.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 1710b] gi|121230359|gb|ABM52877.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei SAVP1] gi|124291523|gb|ABN00792.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei NCTC 10229] gi|126220215|gb|ABN83721.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 668] gi|126228085|gb|ABN91625.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 1106a] gi|126244051|gb|ABO07144.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei NCTC 10247] gi|134248351|gb|EBA48434.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 305] gi|147746605|gb|EDK53682.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei FMH] gi|147751586|gb|EDK58653.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei JHU] gi|148025403|gb|EDK83557.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei 2002721280] gi|157939332|gb|EDO95002.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei Pasteur 52237] gi|160696652|gb|EDP86622.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei ATCC 10399] gi|169651574|gb|EDS84267.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei S13] gi|184211362|gb|EDU08405.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 1655] gi|217396000|gb|EEC36017.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 576] gi|225933633|gb|EEH29621.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei Pakistan 9] gi|237502905|gb|ACQ95223.1| outer membrane lipoprotein [Burkholderia pseudomallei MSHR346] gi|238525396|gb|EEP88824.1| outer membrane lipoprotein [Burkholderia mallei GB8 horse 4] gi|242138414|gb|EES24816.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 1106b] gi|243065357|gb|EES47543.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia mallei PRL-20] gi|254217080|gb|EET06464.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia pseudomallei 1710a] Length = 170 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + + FD S + +LQ+ + L + I I+G+TD + N L Sbjct: 63 KRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDER---GTSEYNLALGQK 119 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + + L GV + ++ +S + + + NRR D++ Sbjct: 120 RAEAVRRALSLLGVGDAQMEAVS-LGKEKPVALGHDEASWAQNRRADLV 167 >gi|296534740|ref|ZP_06897115.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957] gi|296264932|gb|EFH11182.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957] Length = 97 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 6/82 (7%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 T I + GH D + N RLS RA + L++ GVS I + F R Sbjct: 20 RTQTTRIEVAGHADR---SGSPQYNQRLSQRRADAVAAELVRQGVSRSAI-TVQAFGESR 75 Query: 320 LKIASDPM--NSANRRIDILVE 339 + + NRR++I++ Sbjct: 76 PLVPTADGVREPQNRRVEIVLR 97 >gi|156973901|ref|YP_001444808.1| hypothetical protein VIBHAR_01611 [Vibrio harveyi ATCC BAA-1116] gi|156525495|gb|ABU70581.1| hypothetical protein VIBHAR_01611 [Vibrio harveyi ATCC BAA-1116] Length = 173 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + +L L+ + ++I GH D N L RA + Sbjct: 73 FAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADER---GTPEYNIALGERRAEAV 129 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L GV ++IS +S + + + + NRR ++ Sbjct: 130 SNYLQALGVQAEQISIVS-YGEEKPLLLGQSEEVYAKNRRAVLV 172 >gi|262171113|ref|ZP_06038791.1| outer membrane protein [Vibrio mimicus MB-451] gi|261892189|gb|EEY38175.1| outer membrane protein [Vibrio mimicus MB-451] Length = 278 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/272 (13%), Positives = 85/272 (31%), Gaps = 25/272 (9%) Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 G + PE+ + ++ D +G + + + E Sbjct: 15 GTAGCTSYPEKGRGGIAEAYMNGEFAPVMPDEPLGPEHG--------LRFDWQLSKLHLE 66 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + + + + + L + + ++ KR +L+ ++S Sbjct: 67 SLIREGAKWCFPAAVVQALEKQNRIARQLDGGLLLDAANDLVIQRKRLNQLEQQLDYVTS 126 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + N V + + + F +S+ P+ + L + L Sbjct: 127 QTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQ---FAINSTEINPKYMGNLAIAADKLKA 183 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + +S+ GH D+ + N +L++ RA + L G++ +RI+ S Sbjct: 184 RQDLTLSVTGHADS---SGNSEFNEKLAMGRAEQVKRYLTIFGLAPERITTHS-LGESLP 239 Query: 321 KIASDPMNSA--NRRIDILV-------EDRQG 343 + NRR+ I + +QG Sbjct: 240 LYVGETPGVKLTNRRVSIEIITADSPNLSKQG 271 >gi|224372379|ref|YP_002606751.1| lipoprotein [Nautilia profundicola AmH] gi|223589117|gb|ACM92853.1| lipoprotein [Nautilia profundicola AmH] Length = 195 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 8/103 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRA 292 FD P+ ++K+ E++ ++ ++ G+ D N+ L L RA Sbjct: 90 VYFDFDKYNIRPDQWPKVEKLAELIKNNPANYTVRIEGNCDEW---GTEEYNYALGLKRA 146 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333 S L+K GV +++ IS + + NRR Sbjct: 147 NSVKNALIKLGVDPKKLTIIS-YGELNPVCTAHAKWCWRKNRR 188 >gi|91975488|ref|YP_568147.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] gi|91681944|gb|ABE38246.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] Length = 212 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 74/189 (39%), Gaps = 18/189 (9%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 + +++ ++ + ++ + L + + +LS + I + Sbjct: 33 ATEDQILRALAPKKPLTRSLSASRPAADPAERQFVDTLRNRTTRSLSSGEREQIA-TLAK 91 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDA 274 + + I+ FD +S+ + + +G+ L++ + GHTD+ Sbjct: 92 DKPNIDLEIT---------FDYNSANISRKAEPAVDALGKALSNPDLKGSTFVVAGHTDS 142 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333 N LS RA + +VL++ G++ + + G+ ++ K A P + +NRR Sbjct: 143 I---GGDAYNQELSERRADTIKRVLVEKYGIAGSDLVTV-GYGENKPKDAVRPADPSNRR 198 Query: 334 IDILVEDRQ 342 + ++ Q Sbjct: 199 VQVVNMTSQ 207 >gi|307294285|ref|ZP_07574129.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1] gi|306880436|gb|EFN11653.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1] Length = 358 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 11/111 (9%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F+ S P+ +L ++ + + G+ D A N LS Sbjct: 247 PYIVFFEWDKSDITPDAATILDNAVSAYSNCGSAQVMLAGYADR---SGSASYNVGLSQR 303 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS----ANRRIDIL 337 RA + + G+ + + F ++ + + NRR++I Sbjct: 304 RADAVKAYVASKGIPDG-VITTQAFGEANPRV--ETADGVRELQNRRVEIT 351 >gi|229496999|ref|ZP_04390704.1| immunogenic 75 kDa protein PG4 [Porphyromonas endodontalis ATCC 35406] gi|229316101|gb|EEN82029.1| immunogenic 75 kDa protein PG4 [Porphyromonas endodontalis ATCC 35406] Length = 691 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 35/147 (23%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 + + + S+ LPE+ V L +I ++L + EV+ + H D N Sbjct: 529 VSEVFQDIFYAFDSADLLPESKVALDQIAKILQDNPEVVVELSSHADRV---GSDAYNLG 585 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI------------ASDP-------- 326 LS RA + L G+ D++ + G+ R ++ Sbjct: 586 LSDRRARAVVDYLKGKGIPADQL-QPKGYGKSRPRVISSALHVLYPQFPEGTILDEAFVT 644 Query: 327 ---------MNSANRRID-ILVEDRQG 343 ++ NRR + I+++ +G Sbjct: 645 ALSEEDKKIADALNRRTEFIVIDRVEG 671 >gi|225872180|ref|YP_002753635.1| OmpA family protein [Acidobacterium capsulatum ATCC 51196] gi|225792320|gb|ACO32410.1| OmpA family protein [Acidobacterium capsulatum ATCC 51196] Length = 245 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 7/117 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285 + ++ S P+ ++Q+ L + I G+ D N Sbjct: 133 TFEANVKPVFYNFDSYSVRPDAQAIIQQDANYLIQHPNLHVVIGGYCDDR---GSVEYNL 189 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 L +RA +A Q L+ +GVS DR+ +S + + ++ +NRR ++ Sbjct: 190 ALGENRANAAKQALVSAGVSPDRLRTVS-YGKEKQFCTEQNESCWQSNRRAQFTLDQ 245 >gi|157146633|ref|YP_001453952.1| peptidoglycan-associated outer membrane lipoprotein [Citrobacter koseri ATCC BAA-895] gi|157083838|gb|ABV13516.1| hypothetical protein CKO_02399 [Citrobacter koseri ATCC BAA-895] Length = 172 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 67 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 123 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 124 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 171 >gi|114320611|ref|YP_742294.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227005|gb|ABI56804.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 324 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 8/106 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRA 292 F + L + + I GHTD+ A N RL RA Sbjct: 219 VYFGFDHAGLTRTAKDALARFANQAGDDPHLQVIVAVGHTDS---AGPADYNERLGARRA 275 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 + LM+ G++++RI ++ + +A D +ANRR+++ Sbjct: 276 EAVRAELMRRGIADERI-RLRSLGERQPAMAEDDGYGRAANRRVEV 320 >gi|283835685|ref|ZP_06355426.1| OmpA family protein [Citrobacter youngae ATCC 29220] gi|291068900|gb|EFE07009.1| OmpA family protein [Citrobacter youngae ATCC 29220] Length = 160 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +FDK+ PE+ +Q++ LA + + GHTD N LSL R Sbjct: 52 DNILFDKNDYKLRPESEKQIQEMASKLAATGLNHARLDGHTDNY---GEDSYNEALSLKR 108 Query: 292 AYSAYQ-VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A + + ++ G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAQGANIPRTNLTT-QGLGKKYPIASNQTSKGRAENRRVAVVI 157 >gi|311280379|ref|YP_003942610.1| peptidoglycan-associated lipoprotein [Enterobacter cloacae SCF1] gi|308749574|gb|ADO49326.1| peptidoglycan-associated lipoprotein [Enterobacter cloacae SCF1] Length = 173 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 68 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNIALGER 124 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 172 >gi|289647908|ref|ZP_06479251.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. 2250] Length = 656 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 85/294 (28%), Gaps = 19/294 (6%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 +E + +T S + +R++ ++ + + ++ + + + Sbjct: 365 FARLESVMLKPTADNLTRSLYLLSSIKIYQRNAPTLTTVTGIDSVEPRALPVDNRAQSVA 424 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + LS +Q+ + L + + Sbjct: 425 TFGKTTLDTYLMLSKAQREQADPAVLKARIPDYWYPAIYKQVPHDTGMSAQAAGEVDDYQ 484 Query: 182 KILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 Q + L+ + + + +++ I I + +F Sbjct: 485 FAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETITLESDTLFAFG 544 Query: 241 SSIPLP---ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + L I L ++ I I GH D A+ N ++S RA + Sbjct: 545 RADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQI---GDAQSNLQVSKQRAQTI 601 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340 L+ G+ + + + G ++ + D NRR++I V Sbjct: 602 KTYLVGKGLPSELVDAV-GEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEVRA 654 >gi|289803197|ref|ZP_06533826.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 128 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 23 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 79 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 80 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 127 >gi|328676430|gb|AEB27300.1| Outer membrane lipoprotein omp16 precursor [Francisella cf. novicida Fx1] Length = 417 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286 FD S + VL K+ L T +I+G+ TD N R Sbjct: 70 FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS +RA S + L+ G+ I + +D + N+R++I ++ R Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183 >gi|290954085|ref|ZP_06558706.1| ompA family protein [Francisella tularensis subsp. holarctica URFT1] gi|295312516|ref|ZP_06803280.1| ompA family protein [Francisella tularensis subsp. holarctica URFT1] Length = 363 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286 FD S + VL K+ L T +I+G+ TD N R Sbjct: 70 FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS +RA S + L+ G+ I + +D + N+R++I ++ R Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183 >gi|218709511|ref|YP_002417132.1| outer membrane protein [Vibrio splendidus LGP32] gi|218322530|emb|CAV18689.1| Outer membrane protein [Vibrio splendidus LGP32] Length = 278 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 83/250 (33%), Gaps = 8/250 (3%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 + + +S++ + + + L + Q ++ ++L ++ + Sbjct: 24 PEQGTGGLAESYDSINYQNSDFSPVMPDEPLGPEHGLRFDWQLAKLHLDALVQEGARWCF 83 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMK-RKKRLQDLAKKISSTLSGLVADNIVKGV 215 + N+ L + + ++KRL +L ++ S + Sbjct: 84 PAAVVQAIEKQNRIARELQGGLLLDAANDLVIQRKRLNELEVQLDYVTSQARCEPPKNEN 143 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDA 274 F + I F ++S+ P+ + L + +L + + + GH DA Sbjct: 144 QFRMQLSVIEQLYDLLNVDNQFAENSTEVNPKYMGRLAEATTLLKENKSLDLVVTGHADA 203 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 + N L+L RA + L G+ RI +S + + NR Sbjct: 204 T---GTEEYNDDLALGRAKQVERYLTIFGLGVQRIKAVS-VGETVPLFEGESDGTRLTNR 259 Query: 333 RIDILVEDRQ 342 R+ I V + Sbjct: 260 RVSIEVISPK 269 >gi|208780408|ref|ZP_03247749.1| OmpA family protein [Francisella novicida FTG] gi|208743776|gb|EDZ90079.1| OmpA family protein [Francisella novicida FTG] Length = 408 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286 FD S + VL K+ L T +I+G+ TD N R Sbjct: 61 FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 117 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS +RA S + L+ G+ I + +D + N+R++I ++ R Sbjct: 118 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 174 >gi|254369026|ref|ZP_04985039.1| hypothetical protein FTAG_00866 [Francisella tularensis subsp. holarctica FSC022] gi|157121947|gb|EDO66117.1| hypothetical protein FTAG_00866 [Francisella tularensis subsp. holarctica FSC022] Length = 417 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286 FD S + VL K+ L T +I+G+ TD N R Sbjct: 70 FDADSYTLNTQAKKVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS +RA S + L+ G+ I + +D + N+R++I ++ R Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183 >gi|254373800|ref|ZP_04989283.1| hypothetical protein FTDG_01584 [Francisella novicida GA99-3548] gi|151571521|gb|EDN37175.1| hypothetical protein FTDG_01584 [Francisella novicida GA99-3548] Length = 417 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286 FD S + VL K+ L T +I+G+ TD N R Sbjct: 70 FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS +RA S + L+ G+ I + +D + N+R++I ++ R Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183 >gi|254372326|ref|ZP_04987817.1| OmpA family protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570055|gb|EDN35709.1| OmpA family protein [Francisella novicida GA99-3549] Length = 417 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286 FD S + VL K+ L T +I+G+ TD N R Sbjct: 70 FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS +RA S + L+ G+ I + +D + N+R++I ++ R Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183 >gi|134302267|ref|YP_001122236.1| ompA family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134050044|gb|ABO47115.1| ompA family protein [Francisella tularensis subsp. tularensis WY96-3418] Length = 417 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286 FD S + VL K+ L T +I+G+ TD N R Sbjct: 70 FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS +RA S + L+ G+ I + +D + N+R++I ++ R Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183 >gi|119382556|gb|ABL73890.1| outer membrane protein A [synthetic construct] Length = 388 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 72/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ P + + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAE-NNGCPWPDADNDGV--------- 220 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + + + F+ + + PE+ L Sbjct: 221 ------LDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|161520074|ref|YP_001583501.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC 17616] gi|160344124|gb|ABX17209.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616] Length = 277 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 17/119 (14%) Query: 233 NTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRL 287 +F + S P L + I + GHTD N L Sbjct: 159 GEALFPFAKSSLDSMLPGGRAELDDAIAKIRAERGTTRIDVVGHTDRI---GSDESNRAL 215 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILV 338 S RA + + L+ G+ RI + G + P +RR+ I V Sbjct: 216 SRARAETVKRYLVAHGLDAARI-RTEGAGSSQPVSHCPPGESPAVIACLQKDRRVTITV 273 >gi|118496956|ref|YP_898006.1| OmpA family protein [Francisella tularensis subsp. novicida U112] gi|194324185|ref|ZP_03057959.1| OmpA family protein [Francisella tularensis subsp. novicida FTE] gi|118422862|gb|ABK89252.1| OmpA family protein [Francisella novicida U112] gi|194321632|gb|EDX19116.1| OmpA family protein [Francisella tularensis subsp. novicida FTE] Length = 417 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286 FD S + VL K+ L T +I+G+ TD N R Sbjct: 70 FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS +RA S + L+ G+ I + +D + N+R++I ++ R Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183 >gi|57339664|gb|AAW49819.1| hypothetical protein FTT0831 [synthetic construct] Length = 452 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286 FD S + VL K+ L T +I+G+ TD N R Sbjct: 96 FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 152 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS +RA S + L+ G+ I + +D + N+R++I ++ R Sbjct: 153 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 209 >gi|89255751|ref|YP_513113.1| OmpA family protein [Francisella tularensis subsp. holarctica LVS] gi|115314245|ref|YP_762968.1| OmpA family protein [Francisella tularensis subsp. holarctica OSU18] gi|167009203|ref|ZP_02274134.1| possible OmpA family protein [Francisella tularensis subsp. holarctica FSC200] gi|169656511|ref|YP_001427779.2| OmpA family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187931246|ref|YP_001891230.1| OmpA family protein [Francisella tularensis subsp. mediasiatica FSC147] gi|254367123|ref|ZP_04983156.1| outer membrane protein ompA [Francisella tularensis subsp. holarctica 257] gi|89143582|emb|CAJ78765.1| OmpA family protein [Francisella tularensis subsp. holarctica LVS] gi|115129144|gb|ABI82331.1| possible OmpA family protein [Francisella tularensis subsp. holarctica OSU18] gi|134252946|gb|EBA52040.1| outer membrane protein ompA [Francisella tularensis subsp. holarctica 257] gi|164551579|gb|ABU60823.2| OmpA family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187712155|gb|ACD30452.1| OmpA family protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 417 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286 FD S + VL K+ L T +I+G+ TD N R Sbjct: 70 FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS +RA S + L+ G+ I + +D + N+R++I ++ R Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183 >gi|56707940|ref|YP_169836.1| OmpA family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110670411|ref|YP_666968.1| OmpA family protein [Francisella tularensis subsp. tularensis FSC198] gi|224457021|ref|ZP_03665494.1| OmpA family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254370429|ref|ZP_04986434.1| OmpA family protein [Francisella tularensis subsp. tularensis FSC033] gi|254874744|ref|ZP_05247454.1| ompA family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|54114377|gb|AAV29822.1| NT02FT0718 [synthetic construct] gi|56604432|emb|CAG45464.1| OmpA family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320744|emb|CAL08847.1| OmpA family protein [Francisella tularensis subsp. tularensis FSC198] gi|151568672|gb|EDN34326.1| OmpA family protein [Francisella tularensis subsp. tularensis FSC033] gi|254840743|gb|EET19179.1| ompA family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159125|gb|ADA78516.1| OmpA family protein [Francisella tularensis subsp. tularensis NE061598] Length = 417 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGH---------TDASPFRNIARDNWR 286 FD S + VL K+ L T +I+G+ TD N R Sbjct: 70 FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILT---DYNIR 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 LS +RA S + L+ G+ I + +D + N+R++I ++ R Sbjct: 127 LSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLKSR 183 >gi|332519351|ref|ZP_08395818.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332045199|gb|EGI81392.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 636 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 85/293 (29%), Gaps = 23/293 (7%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + D K I+ P + + D + S E + Sbjct: 356 LGGMDVFYTKEIDGKMAPVRNVGIPVNSNGDDFAFHINEETGEGFVSSNREGGKGDDDIY 415 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 +I + L + ++ ++ DS+ K+T+ E + Sbjct: 416 QIKK--IQPLCDVLIVATIVDNKTKAPIAGASASLVDSKGNVLSTKTTNAEGKVEYIVEC 473 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + + + K L + L D I K + E Sbjct: 474 DTDTELQVTMQDYESNK-LAIAGDDVEEVAVELALDPIEKIIEVEEVVL----------R 522 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 FD S + L + +V+ ++ I HTD R + N LS RA Sbjct: 523 PIYFDYDKSNITAKAAFELDNLVQVMNKYPDMVIYATSHTD---IRASNKYNDALSDRRA 579 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIA-----SDPMNSANRRIDILVED 340 + Q ++ G+ RI +G L + ++ + NRR + + Sbjct: 580 KTTVQYIISKGIDATRI-SGAGKGERELAVDCGTNCTEEQHQLNRRSEFKILS 631 >gi|290957838|ref|YP_003489020.1| hypothetical protein SCAB_33721 [Streptomyces scabiei 87.22] gi|260647364|emb|CBG70469.1| putative secreted protein [Streptomyces scabiei 87.22] Length = 206 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 64/210 (30%), Gaps = 19/210 (9%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + +L + D + + E P K A Sbjct: 8 PRTTVLAGAVAVLAALTLAAPAHAADDPSEPPGTVTTSPPPEVDANSPALKLAQGATLAP 67 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 ++ D+ + ++ + V F + +F K+S+ P+ Sbjct: 68 AKVLDIKSVVEDLGGEERREDTNENVTFAL------------QAEVLFPKNSAKLNPQAR 115 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +Q I E + + + G TD LS RA + + +L + + + Sbjct: 116 SRIQTIAEEIKKQDAVKVRVFGFTDNL---GSYAHGLTLSKKRAEAVHDLL-ATDLDGNV 171 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDI 336 ++ G++ + NRR+++ Sbjct: 172 TFEVRGYSEDYPIADNATEEGRKKNRRVEV 201 >gi|158318192|ref|YP_001510700.1| OmpA/MotB domain-containing protein [Frankia sp. EAN1pec] gi|158113597|gb|ABW15794.1| OmpA/MotB domain protein [Frankia sp. EAN1pec] Length = 186 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +FD +S+ PE L + + + G++D N LS RA + Sbjct: 89 LFDANSADLRPEAATALAGTVPQIREHDGRVQVVGYSDGL---GTTEHNLDLSRRRAVAV 145 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 L+ + + ++ +++ RR++I++ Sbjct: 146 QAYLVSQDIPAS-LLEVEAKGEQG--ATDGVADASRRRVEIVLR 186 >gi|325274583|ref|ZP_08140640.1| peptidoglycan-associated lipoprotein [Pseudomonas sp. TJI-51] gi|324100285|gb|EGB98074.1| peptidoglycan-associated lipoprotein [Pseudomonas sp. TJI-51] Length = 146 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 4/84 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 67 FEYDSSDLKPEAMRALDVHAKDLKANGNRVVLEGNTDER---GTREYNMALGERRAKAVQ 123 Query: 297 QVLMKSGVSEDRISKISGFAHHRL 320 + L+ GVS ++ ++ + R Sbjct: 124 RYLVLQGVSPAQL-EVVSYGEERP 146 >gi|148980294|ref|ZP_01815981.1| putative sodium-type flagellar protein MotY precursor [Vibrionales bacterium SWAT-3] gi|145961313|gb|EDK26623.1| putative sodium-type flagellar protein MotY precursor [Vibrionales bacterium SWAT-3] Length = 299 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F + + + I ++ I I G+TD + N +LS R Sbjct: 195 FQQGAVDLTEGQKRTINDISTLVKRDSRIIKILIDGYTDN---SGDSVANLQLSKQRGSD 251 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 Q M +GVS ++ +I G K + NRR++I + + Sbjct: 252 VAQWFMGNGVS-KQMIEIRGHGDRYPKYDNTTQQGRDKNRRVEIRLVRK 299 >gi|331018731|gb|EGH98787.1| OmpA domain-containing protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 830 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 639 RQTGKTITANAEAGSNLDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 ++ I I + +F + E L I L + + I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKVEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + + G + + D Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVRCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|259090537|gb|ACV91891.1| OprL [Pseudomonas fluorescens] gi|259090541|gb|ACV91893.1| OprL [Pseudomonas fluorescens] Length = 156 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 4/87 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 66 FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 122 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA 323 + L+ GVS ++ +S + R Sbjct: 123 RYLVLQGVSPAQLELVS-YGKERPVAT 148 >gi|240948744|ref|ZP_04753116.1| lipoprotein Plp4 [Actinobacillus minor NM305] gi|240296960|gb|EER47538.1| lipoprotein Plp4 [Actinobacillus minor NM305] Length = 282 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 19/125 (15%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + V+ + L S + + + G+TD N LS R Sbjct: 141 GDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAQQVKVAGYTDRL---GSVNYNLDLSQRR 197 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI-----LV 338 A L++ GV+ +I + G+ A D + NRR++I ++ Sbjct: 198 ANMVKARLVQQGVTA-QIEAV-GYGKANQVKACDGESGQALRDCLRPNRRVEISANGGVL 255 Query: 339 EDRQG 343 +G Sbjct: 256 TQSEG 260 >gi|170739168|ref|YP_001767823.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46] gi|168193442|gb|ACA15389.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46] Length = 213 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 8/102 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI---RGHTDASPFRNIARDNWRLSLDRAY 293 F +S+ P+ + V++ +G L+ S+ GHTDA N LS RA Sbjct: 102 FAYNSAQIGPKALPVVKVLGATLSRPQMSGSVILIVGHTDA---NGSDHGNQVLSERRAE 158 Query: 294 SAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 + Q ++ GV + + G+ LK A+ P NRR+ Sbjct: 159 AVKQYIVHNYGVPAANLVAV-GYGKRHLKDAARPTAPENRRV 199 >gi|114776804|ref|ZP_01451847.1| hypothetical protein SPV1_11331 [Mariprofundus ferrooxydans PV-1] gi|114552890|gb|EAU55321.1| hypothetical protein SPV1_11331 [Mariprofundus ferrooxydans PV-1] Length = 219 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 57/203 (28%), Gaps = 16/203 (7%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + P I K L+ + L D + Sbjct: 14 DANPDGTPLHSSAPQTVQNQQAAPVSHTPSIDDGKTNDELRAQNDAMKQELKAAE-DELA 72 Query: 213 KGVLFETTRTGILISIIDQR-NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IR 269 + ++ D+ F + P+T VL I + IR Sbjct: 73 RLQKISHKALPAMLEPHDRLWARISFKSGQTSVEPKTRKVLTAIAGKFLAHPGKMHLEIR 132 Query: 270 GHTDASPFRN-----IARDN----WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 G++D P R N L+ RA + V++ +G+ + + +G Sbjct: 133 GYSDDEPIGGYKHSHKPRHNLKSLQALTQARADAVAAVMIDAGIPQT-LVHATGMGATGF 191 Query: 321 KIASDPMNSA--NRRIDILVEDR 341 ++ NRR+DI + Sbjct: 192 ISDNNTAEGRSKNRRVDIHLVTD 214 >gi|330991879|ref|ZP_08315828.1| Outer membrane lipoprotein omp16 [Gluconacetobacter sp. SXCC-1] gi|329760900|gb|EGG77395.1| Outer membrane lipoprotein omp16 [Gluconacetobacter sp. SXCC-1] Length = 156 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + +F S + L K LA + + I G+ D N L R Sbjct: 51 DRVLFALKQSTLSSDAKAELDKQAAWLAKYPQVHVQIAGNCDDR---GTEEYNIALGERR 107 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANR 332 A +A+ L+ GV R++ IS + R + + NR Sbjct: 108 ANAAHDYLVAKGVDASRMTTIS-YGKDRPTAVGDDEASWAQNR 149 >gi|296448590|ref|ZP_06890462.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b] gi|296253908|gb|EFH01063.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b] Length = 454 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 14/123 (11%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285 +T FD S P+ L I L +EV + GHTDA+ DN Sbjct: 329 DIDTITFDSGSWTVAPDQAQRLSVIATALNQAIRNNPSEVFLVEGHTDAT---GSDVDNL 385 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL----VED 340 LS RA S +L + V + ++ G+ K+ + NRR+ + + + Sbjct: 386 SLSDRRAQSVATLLTRDFDVPAENLTT-QGYGEQYPKVDVQGPSRENRRVTVRRITPLLN 444 Query: 341 RQG 343 QG Sbjct: 445 GQG 447 >gi|213970767|ref|ZP_03398891.1| OmpA domain protein [Pseudomonas syringae pv. tomato T1] gi|301383000|ref|ZP_07231418.1| OmpA domain-containing protein [Pseudomonas syringae pv. tomato Max13] gi|302059103|ref|ZP_07250644.1| OmpA domain-containing protein [Pseudomonas syringae pv. tomato K40] gi|302133343|ref|ZP_07259333.1| OmpA domain-containing protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924439|gb|EEB58010.1| OmpA domain protein [Pseudomonas syringae pv. tomato T1] Length = 830 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 18/254 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + ++ + + + + LS +Q+ + L + Sbjct: 579 TGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIA 638 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 K+I + + + + + + T Sbjct: 639 RQTGKTITANAEAGSNLDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLT 698 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLP---ETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 ++ I I + +F + E L I L + + I GH D Sbjct: 699 QSLKAIETITLESDTLFAFGRADFQSLKVEGQNQLSAIAGKLLSTPNIGKIVIAGHADQL 758 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----- 330 + N ++S RA + L+ GV + + + G + + D Sbjct: 759 ---GDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAV-GEGSEKPLVRCDMQQPRAQLIQ 814 Query: 331 ----NRRIDILVED 340 NRR++I V Sbjct: 815 CLEPNRRVEIEVRA 828 >gi|186477205|ref|YP_001858675.1| peptidoglycan-associated lipoprotein [Burkholderia phymatum STM815] gi|184193664|gb|ACC71629.1| peptidoglycan-associated lipoprotein [Burkholderia phymatum STM815] Length = 169 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + +LQ+ + L + + I+G+TD + N L RA + Sbjct: 67 FDFDSYSVKDDYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV + + +S + + + + NRR D++ Sbjct: 124 RRSLSLLGVPDSEMEAVS-LGKEKPQATGHDEASWAQNRRADLV 166 >gi|307728550|ref|YP_003905774.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1003] gi|323524837|ref|YP_004226990.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1001] gi|307583085|gb|ADN56483.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1003] gi|323381839|gb|ADX53930.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1001] Length = 169 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + +LQ+ + L + + I+G+TD + N L RA + Sbjct: 67 FDFDSYSVKDDYQSLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + L GV++ ++ +S + + + + NRR D++ Sbjct: 124 RRSLSLMGVTDSQMEAVS-LGKEKPQATGHDESSWAQNRRADLV 166 >gi|153836574|ref|ZP_01989241.1| outer membrane protein [Vibrio parahaemolyticus AQ3810] gi|149750172|gb|EDM60917.1| outer membrane protein [Vibrio parahaemolyticus AQ3810] Length = 284 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 7/158 (4%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 +++RL L +++ L+ + F S+ P+ Sbjct: 102 QRRRLNQLEQQLDYVLTQTACTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPK 161 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + L + +L + + GH D N +L+ +RA + L GV+ Sbjct: 162 YMGHLAEAAYILRDHPALSLVVTGHAD---VTGTPEHNKKLAQERAEQVKRYLSVFGVTS 218 Query: 307 DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 DR+ NRR+ I V Sbjct: 219 DRVQT-KSVGDTLPLYEGQTPAVRLTNRRVSIEVLSAN 255 >gi|91792716|ref|YP_562367.1| OmpA/MotB [Shewanella denitrificans OS217] gi|91714718|gb|ABE54644.1| OmpA/MotB [Shewanella denitrificans OS217] Length = 209 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 16/158 (10%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID---------QRNTPMFDKSSSIP 244 +L+ + + D++ + T+ +L + F+ + S Sbjct: 53 ELSVQQEPEIEPSDFDSMEQVQTAAITQNCVLDETSEFNLSACDSIDIAPVYFEFAKSQV 112 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSG 303 L +L+KI + S I++ GHTD N LSL RA + VL+ + G Sbjct: 113 LQTQKPLLKKIAMLANQSGAKITLVGHTD---IIGSEAFNQNLSLKRAMNVSAVLVAEYG 169 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + I G + N NRR++I + Sbjct: 170 LMASDIHYY-GVGSTEPADDNATANGRQANRRVEITIT 206 >gi|323496851|ref|ZP_08101888.1| sodium-type flagellar protein MotY [Vibrio sinaloensis DSM 21326] gi|323318110|gb|EGA71084.1| sodium-type flagellar protein MotY [Vibrio sinaloensis DSM 21326] Length = 293 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 37/293 (12%), Positives = 91/293 (31%), Gaps = 17/293 (5%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + + + +Y ++ E + K ++D Sbjct: 13 LASFASQSFAMDVRYVATPQQSQWQMITNTPLECRMVHPIPNYGDAVFSSHASKKINLDF 72 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 ++ + + + + + R ++ +++ E Sbjct: 73 ELKMKRPMGKTRDVSLISMPPVWRPGEGANRITNIRFFQQFDGYVGGQTAWGILSELEKG 132 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 P S ++ + + + +SS L + + + I+ Sbjct: 133 RYPTFSYQEWQSRDERVEVA-----LSSVLFQSSYNVFSDCIANLLPYSFEDIAFTILH- 186 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDR 291 +D++S ++ L +I E + H+ ++ + +TDA ++ + LS R Sbjct: 187 ---YDRTSVELNKQSQKRLAQIAEYIRHNQDIDLVLVSTYTDAEDTKSAS---QNLSERR 240 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 A + G+ EDRI ++ G+ R + NRR+ I + Q Sbjct: 241 AEVLQEYFKSLGLPEDRI-RVQGYGKRRPIDDNASPIGKDRNRRVVISLGRTQ 292 >gi|332520148|ref|ZP_08396612.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332044707|gb|EGI80901.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 636 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 85/293 (29%), Gaps = 23/293 (7%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + D K I+ P + + D + S E + Sbjct: 356 LGGMDVFYTKEIDGKMAPVRNVGIPVNSNGDDFAFHINEETGEGFVSSNREGGKGDDDIY 415 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 +I + L + ++ ++ DS+ K+T+ E + Sbjct: 416 QIKK--IQPLCDVLIVATIVDNKTKAPIAGASASLVDSKGNVLSTKTTNAEGKVEYIVEC 473 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + + + K L + L D I K + E Sbjct: 474 DTDTELQVTMQDYESNK-LAIAGDDVEEVAVELALDPIEKIIEVEEVVL----------R 522 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 FD S + L + +V+ ++ I HTD R + N LS RA Sbjct: 523 PIYFDYDKSNITAKAAFELDNLVQVMNKYPDMVIYATSHTD---IRASNKYNDALSDRRA 579 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIA-----SDPMNSANRRIDILVED 340 + Q ++ G+ RI +G L + ++ + NRR + + Sbjct: 580 KTTVQYIISKGIDATRI-SGAGKGERELAVDCGTNCTEEQHQLNRRSEFKILS 631 >gi|301064490|ref|ZP_07204897.1| OmpA family protein [delta proteobacterium NaphS2] gi|300441407|gb|EFK05765.1| OmpA family protein [delta proteobacterium NaphS2] Length = 275 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 6/99 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + PE L + V + + ++G+TD + N LSL R Sbjct: 176 GDVLFDFDKANIKPEFYGQLDEAARVFEMNPGLKVEVQGNTDNV---GTYKYNMGLSLRR 232 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 A + L+K GV R+ G A H +D Sbjct: 233 ANAVLNYLVKRGVDRSRL-AARGSATHVP-SHNDTPEGR 269 >gi|216263832|ref|ZP_03435826.1| outer membrane protein [Borrelia afzelii ACA-1] gi|215979876|gb|EEC20698.1| outer membrane protein [Borrelia afzelii ACA-1] Length = 389 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 10/147 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I + + + + +K + E GI +S+ + F S L + L I Sbjct: 250 DNFIETEVENYIQEKKIKAISVEKNTKGINLSLDIE-----FYPDSFQILQKEYKKLDLI 304 Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++L I I GHT+ + + LS RA + L+K + G Sbjct: 305 AKLLEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKIKNKDQILFKG 361 Query: 315 FAHHRLKIA-SDPMNSANRRIDILVED 340 + + K S P+ + NRR++I + + Sbjct: 362 WGSQKPKYPKSSPLKAKNRRVEITILN 388 >gi|111114988|ref|YP_709606.1| outer membrane protein [Borrelia afzelii PKo] gi|110890262|gb|ABH01430.1| outer membrane protein [Borrelia afzelii PKo] Length = 389 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 10/147 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I + + + + +K + E GI +S+ + F S L + L I Sbjct: 250 DNFIETEVENYIQEKKIKAISVEKNTKGINLSLDIE-----FYPDSFQILQKEYKKLDLI 304 Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++L I I GHT+ + + LS RA + L+K + G Sbjct: 305 AKLLEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKIKNKDQILFKG 361 Query: 315 FAHHRLKIA-SDPMNSANRRIDILVED 340 + + K S P+ + NRR++I + + Sbjct: 362 WGSQKPKYPKSSPLKAKNRRVEITILN 388 >gi|258625023|ref|ZP_05719945.1| Outer membrane protein [Vibrio mimicus VM603] gi|258582691|gb|EEW07518.1| Outer membrane protein [Vibrio mimicus VM603] Length = 278 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 37/272 (13%), Positives = 85/272 (31%), Gaps = 25/272 (9%) Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 G + PE+ + ++ D +G + + + E Sbjct: 15 GTAGCTSYPEKGRGGIAEAYMNGEFAPVMPDEPLGPEHG--------LRFDWQLSKLHLE 66 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + + + + + L + + ++ KR +L+ ++S Sbjct: 67 SLIREGAKWCFPAAVVQALEKQNRIARQLDGGLLLDAANDLVIQRKRLNQLEQQLDYVTS 126 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + N V + + + F +S+ P+ + L + L Sbjct: 127 QTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQ---FAINSTEINPKYMGNLAIAADKLKA 183 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + +S+ GH D+ + N +L++ RA + L G++ +RI+ S Sbjct: 184 RQDLTLSVTGHADS---SGNSEFNEKLAMGRAEQVKRYLTIFGLAPERITTHS-LGESLP 239 Query: 321 KIASDPMNSA--NRRIDILV-------EDRQG 343 + NRR+ I + +QG Sbjct: 240 LYVGETPGVKLTNRRVSIEIITADSPNLSKQG 271 >gi|167648381|ref|YP_001686044.1| peptidoglycan-associated lipoprotein [Caulobacter sp. K31] gi|167350811|gb|ABZ73546.1| peptidoglycan-associated lipoprotein [Caulobacter sp. K31] Length = 185 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 7/112 (6%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 + +I+ FD + L + L + I G+ D Sbjct: 67 VQDFVINIGERIYFDTDQYDIRSDAQPTLAAQAQWLNRYPAVRVRIEGNADER---GTRE 123 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332 N L RA + + L+ GVS RI +S + + + + + NR Sbjct: 124 YNLALGARRANAVREFLVAQGVSGSRIETLS-YGKEKPIDGGSGEESWAKNR 174 >gi|50235067|gb|AAT70736.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + P Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENTGCPWPDP--------------- 215 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F + + E+ L Sbjct: 216 -DNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEAPGALKGIFFTFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|258621416|ref|ZP_05716450.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM573] gi|258586804|gb|EEW11519.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM573] Length = 173 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + T F ++ + +L L + ++I GH D N L Sbjct: 67 ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTIEGHADER---GTPEYNIALGE 123 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV ++S +S + + + + + NRR ++ Sbjct: 124 RRAQAVAKYLEALGVQSGQVSIVS-YGEEKPLVLGQSEDAYAKNRRAVLV 172 >gi|4704601|gb|AAD28174.1|AF104303_1 fibronectin binding protein [Campylobacter jejuni] Length = 287 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 5/86 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 206 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 262 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK 321 L K GV + RI + G+ + Sbjct: 263 ANELEKYGVEKSRIKTV-GYGQDNPR 287 >gi|4704599|gb|AAD28173.1|AF104302_1 fibronectin binding protein [Campylobacter jejuni] Length = 287 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 5/86 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P +++I +VL + +I GHTD N +LS RA S Sbjct: 206 FGFDKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNI---GSRAYNQKLSERRAKSV 262 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK 321 L K GV + RI + G+ + Sbjct: 263 ANELEKYGVEKSRIKTV-GYGQDNPR 287 >gi|27375632|ref|NP_767161.1| hypothetical protein blr0521 [Bradyrhizobium japonicum USDA 110] gi|27348769|dbj|BAC45786.1| blr0521 [Bradyrhizobium japonicum USDA 110] Length = 745 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 73/232 (31%), Gaps = 11/232 (4%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 D G T I ++ + E D + Sbjct: 493 DTVGGDTRTVVIRPDGSEIITVVAPDGRLLRRIRRDPGGRELIIIDNSYRDPQSVGGFYV 552 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID- 230 + P ++ + + + + N + I + + Sbjct: 553 DAPPPVVNIPYDRYIVDAEEASPDVIYQTMEAPPVQRINRRYTLDEIRYSPNIRMQMPSI 612 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-----VISIRGHTDASPFRNIARDNW 285 NT F+ S P+ LQ I + L + + V I GHTDA DN Sbjct: 613 DVNTITFETGSWTIPPDQAAKLQVIADGLNRAIQANPRVVFLIEGHTDAV---GNEVDNL 669 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA SA ++L + GV + ++ G+ LK + ++ NRR+ + Sbjct: 670 SLSDRRAQSAAELLTQQFGVPAENLTS-QGYGEQYLKEQTQGPSAINRRVTV 720 >gi|218677868|ref|ZP_03525765.1| putative outer membrane protein, OmpA family [Rhizobium etli CIAT 894] Length = 145 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285 +T F S+ L+K+ + + +E I GHTDA + N Sbjct: 24 DLDTVTFATGSAEIPMTQARTLRKVADAISQVLKKDPSETFLIEGHTDAV---GTDQSNL 80 Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA S VL G+ + + G+ LK+ + NRR+ I Sbjct: 81 VLSDQRAESVANVLSDVYGIPPENL-ATQGYGERYLKVNTSGPEQENRRVTI 131 >gi|325102935|ref|YP_004272589.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] gi|324971783|gb|ADY50767.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] Length = 668 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 41/116 (35%), Gaps = 12/116 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + N +D + L K+ + I +R HTD+ A N LS Sbjct: 539 KLNNIYYDFDKYTIRKDAEPELNKVLAFMKKMPYVNIELRAHTDSR---GKASYNMLLSE 595 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 +RA SA L+ G R+ GF +L + + NRR + V Sbjct: 596 NRANSAKLFLLNGGADGSRLLA-KGFGETQLLNHCKDGVKCTKEEHQLNRRTEFKV 650 >gi|241667092|ref|YP_002985176.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862549|gb|ACS60214.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 652 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 63/239 (26%), Gaps = 14/239 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + + + + + + +++ E +S ++ Sbjct: 415 AQEMMAANQPVADYEPLLVAADSPQVLWQASATLGEIYFSSRRFADAAADYQQAIEIIKN 474 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + +S A + + + + GVL + Sbjct: 475 ETRTPKAPPAETISDLIQRAAQARILAANPTSDNPEGSFVPAEKDHRSGVLGGIYSENVR 534 Query: 226 -ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARD 283 I + FD + S +++ E L I + GHTD Sbjct: 535 GIVPVSIPVPITFDFNKSSFTSIGTEAAEELLEALKEQKPGRIILIGHTDRR---GGDDY 591 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-------NSANRRID 335 N +LS RA + L +G+ G + ++ NRR++ Sbjct: 592 NQKLSERRAQAVADFLKSNGLDAT--IDAEGRGASEPVDVTATANLTEDDVDALNRRVE 648 >gi|320355393|ref|YP_004196732.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320123895|gb|ADW19441.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032] Length = 201 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + I ++ G L ++ + I G+TD N L RA SA Sbjct: 100 FDYDHSGIRSDQIPSMEHNGGYLKSNSSARVLIEGNTDNR---GTNEYNLALGERRAMSA 156 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 L++ G+ E RI +S + R + + NRR D ++E Sbjct: 157 KTYLIEFGIEESRIRTVS-YGEERPLFNGGSEDDYAHNRRDDFILE 201 >gi|89111206|dbj|BAE80295.1| outer membrane protein OmpA [Acidovorax avenae subsp. avenae] Length = 379 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + LP++ ++++ ++L T +++ G+TD + A N LS RA + Sbjct: 277 FATDKTDILPDSQPQIEQVVQLLRQDTSLKLAVNGYTDNT---GDAAHNKTLSEGRAKAV 333 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + G+ R+S GF + + NRR++++ Sbjct: 334 AAAVAAQGIDASRLSSA-GFGAADPVADNATDEGKAKNRRVELV 376 >gi|327393167|dbj|BAK10589.1| peptidoglycan-associated lipoprotein precursor Pal [Pantoea ananatis AJ13355] Length = 174 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N F + +L + L + +I GH D N L Sbjct: 69 NNIVYFGLDKYDVQSDYAQMLDQHANFLRSNPSYKVTIEGHADER---GTPEYNIALGER 125 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D++S +S + + + + NRR ++ Sbjct: 126 RANAVKMYLQGKGVSADQMSIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 173 >gi|315223455|ref|ZP_07865312.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287] gi|314946628|gb|EFS98619.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287] Length = 397 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 74/227 (32%), Gaps = 11/227 (4%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 +K + S N ++ +Q + N +H K++ + K +L + + Sbjct: 168 SKQQLTYDTKSANGQQGFQGNHFTLTAGLNIALGKHGKHADWAAASKKDELEEVAQRVAN 227 Query: 167 INKEENYFLPPLS--KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + ++ + K+ ++ ++ V + + Sbjct: 228 LENNVADLKSEVANKQNKMNDANGNNVPDEIESYLNDNYKAKDKVGENGEVKDDDVAADL 287 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 I FD +SS P + + + + + + I+I G+ D + Sbjct: 288 ---IRKGYINAYFDFNSSKPQISSSWAVDFVAKYMKSNPNAHININGYADEL---GGTQY 341 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 N LS RA + +L+K+G+ RI+ G + + Sbjct: 342 NQTLSQKRADAVKDLLVKAGIDGSRITA-EGKGVDASVDKNSS-RAR 386 >gi|283954121|ref|ZP_06371646.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 414] gi|283794400|gb|EFC33144.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 414] Length = 317 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 100/321 (31%), Gaps = 52/321 (16%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+++ + + + Sbjct: 12 W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151 + + ++ +L+ K L N L+ + Q + ++T Sbjct: 45 KEIKDNLNRQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITSYK 104 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208 + KDL + D + L +E + ++ ++ + I LS + Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQ 164 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258 + + + I + +FDK S + E L+K Sbjct: 165 SKLDNNITIDEKTGSISL-----PAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPK 219 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316 + + E I I GHTD+ N LS RAY + S+ ++ SG + Sbjct: 220 ILSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS 276 Query: 317 HHRLKIASDPMN-SANRRIDI 336 + + +RRI+I Sbjct: 277 FSDPVFLNGVEDKDKSRRIEI 297 >gi|270263786|ref|ZP_06192055.1| peptidoglycan-associated outer membrane lipoprotein [Serratia odorifera 4Rx13] gi|270042670|gb|EFA15765.1| peptidoglycan-associated outer membrane lipoprotein [Serratia odorifera 4Rx13] Length = 180 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277 + + + + + N F E +L L ++ ++ GH D Sbjct: 62 EEQARLQMQELQKNNIVYFGLDKYDVSSEFAEMLDAHSAFLRNNPSYKVTVEGHADER-- 119 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA + L GVS D+IS +S + + + + NRR Sbjct: 120 -GTPEYNIALGERRANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAV 177 Query: 336 IL 337 ++ Sbjct: 178 LV 179 >gi|225350140|gb|ACN87980.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDTDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|224812457|gb|ACN64871.1| OmpA family lipoprotein [Burkholderia pseudomallei] Length = 177 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + + FD S + +LQ+ + L + I I+G+TD + N L Sbjct: 70 KRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDER---GTSEYNLALGQK 126 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA + + L GV + ++ +S + + + NRR D++ Sbjct: 127 RAEAVRRALSLLGVGDAQMEAVS-LGKEKPVALGHDEASWAQNRRADLV 174 >gi|220922989|ref|YP_002498291.1| type IV / VI secretion system protein, DotU family [Methylobacterium nodulans ORS 2060] gi|219947596|gb|ACL57988.1| type IV / VI secretion system protein, DotU family [Methylobacterium nodulans ORS 2060] Length = 489 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 8/130 (6%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGH 271 V E T + +++ + +F + E +LQ++ ++A I I GH Sbjct: 361 AGRVTVEETNSQVVVRLA----AALFAPGDAAVTAEFRPLLQRVAGLIAREPGPIRIVGH 416 Query: 272 TDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MN 328 TD++P R N+ LS+ RA + + + +R+ ++ G +D Sbjct: 417 TDSAPVRNGRFASNFDLSVARAKAVAAAIRAAPEKPERL-EVEGKGPDAPVAPNDTVEGR 475 Query: 329 SANRRIDILV 338 + NRR++IL+ Sbjct: 476 ARNRRVEILI 485 >gi|30314434|gb|AAP15426.1| outer membrane lipoprotein precursor [Burkholderia ambifaria] Length = 149 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 47 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + + NRR D++ Sbjct: 104 RRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRRADLV 146 >gi|30314436|gb|AAP15427.1| outer membrane lipoprotein precursor [Burkholderia anthina] Length = 150 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E +LQ+ + L + + I+G+TD + N L RA + Sbjct: 48 FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + NRR D++ Sbjct: 105 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147 >gi|58040120|ref|YP_192084.1| peptidoglycan-associated lipoprotein [Gluconobacter oxydans 621H] gi|58002534|gb|AAW61428.1| Peptidoglycan-associated lipoprotein [Gluconobacter oxydans 621H] Length = 159 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + ++ + S E L K LA +V I + G+ D N L R Sbjct: 54 DRVFYELNQSQLSEEARATLDKQVAWLAKYPQVSIQVAGNCDDR---GTEEYNIALGQRR 110 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANR 332 A +A L+ GVS RI+ IS + R D + NR Sbjct: 111 ANAARDYLVAKGVSASRITTIS-YGKDRPTADGDDEQSWAQNR 152 >gi|237737904|ref|ZP_04568385.1| outer membrane protein OprF [Fusobacterium mortiferum ATCC 9817] gi|229419784|gb|EEO34831.1| outer membrane protein OprF [Fusobacterium mortiferum ATCC 9817] Length = 1511 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 56/137 (40%), Gaps = 10/137 (7%) Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVI 266 +++ + +++ I++ R F+ + + V++K E + I Sbjct: 1381 NDLNPMNIVSSSKKDSSITL---RTKSYFEFDKAELNNNSKKVIEKFSEEINRDNLKGKI 1437 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 I G+TD + N +LSL+RA + L K + D +I G ++ Sbjct: 1438 KIEGYTDNV---GKSSYNEKLSLERATKVAEELKKQVKNSDTEYEILGKGASNPIGNNET 1494 Query: 327 M--NSANRRIDILVEDR 341 + NRR++I +++ Sbjct: 1495 EVGRAKNRRVEIEFQEK 1511 >gi|154149070|ref|YP_001406274.1| Omp18 [Campylobacter hominis ATCC BAA-381] gi|153805079|gb|ABS52086.1| Omp18 [Campylobacter hominis ATCC BAA-381] Length = 154 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 9/120 (7%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNI 280 + I + NT FD + + + + I G+ D Sbjct: 37 LASKIQSEVNTVYFDFDKFNIKTSEQSKISNNAALFNQAGAESLTVKIEGNCDEW---GT 93 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 N+ L L RA +A L+K GV+E+R+ + + L + NRR + V Sbjct: 94 DEYNYALGLKRATAAKDALVKQGVAENRL-SVVSYGESNLVCTDKTKACDAQNRRDEFKV 152 >gi|116329456|ref|YP_799176.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329940|ref|YP_799658.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122200|gb|ABJ80243.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123629|gb|ABJ74900.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 195 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 51/166 (30%), Gaps = 11/166 (6%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + A++ S+ + V N + + D P F Sbjct: 22 SSAEKKEESAAPEPSAQEQSAAANRSVDVNSPEAIADSLNEKLKDFRYPDGITRPGFSYK 81 Query: 241 SSIPLP-ETIVVLQKIGEVLAHSTEVI------SIRGHTDAS---PFRNIARDNWRLSLD 290 + P + + V+ + I GHTDA + N S Sbjct: 82 KADVNPGDFSGWSKVNVPVIKEGLGKLPDSYALEITGHTDAVGPEQAEGAKKGNIFYSEL 141 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 RA + Q L+K G+ +RI G D ++ NRR+ Sbjct: 142 RANAVKQALIKQGIPANRIIA-KGAGSSEPVSGLDAKDAKNRRVTF 186 >gi|50235081|gb|AAT70743.1| OmpA [Riemerella anatipestifer] gi|50235097|gb|AAT70751.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 72/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPETPGLPEFQGCPDTDGDGVPDKDDNCL 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T + ++ + Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPAENNGGPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + R+ F + S PE+ L Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPRSEYAKDATGALQGIFFHFNKSSIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GVS ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|33593045|ref|NP_880689.1| putative lipoprotein [Bordetella pertussis Tohama I] gi|33563420|emb|CAE42299.1| putative lipoprotein [Bordetella pertussis Tohama I] gi|332382458|gb|AEE67305.1| putative lipoprotein [Bordetella pertussis CS] Length = 182 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 8/114 (7%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRG 270 +GV + + I+++ +FD + L L+ I E++ T +++I G Sbjct: 69 HEGVSVRQGKDAVTIAMM---GDVLFDFDKADILAAAEPTLRDIAELIKSPATGIVAIEG 125 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 HTD+ + N LSL RA + Q L GV ++ + G R + Sbjct: 126 HTDS---KGSDSYNKGLSLRRAQAVAQWLGAHGVDAAKL-SVRGLGAARPVQPN 175 >gi|51595504|ref|YP_069695.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pseudotuberculosis IP 32953] gi|153948068|ref|YP_001401830.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pseudotuberculosis IP 31758] gi|170025177|ref|YP_001721682.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pseudotuberculosis YPIII] gi|186894557|ref|YP_001871669.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pseudotuberculosis PB1/+] gi|51588786|emb|CAH20400.1| peptidoglycan-associated lipoprotein Pal, OmpA family of porins [Yersinia pseudotuberculosis IP 32953] gi|152959563|gb|ABS47024.1| peptidoglycan-associated lipoprotein [Yersinia pseudotuberculosis IP 31758] gi|169751711|gb|ACA69229.1| peptidoglycan-associated lipoprotein [Yersinia pseudotuberculosis YPIII] gi|186697583|gb|ACC88212.1| peptidoglycan-associated lipoprotein [Yersinia pseudotuberculosis PB1/+] Length = 168 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPF 277 + + + + + N F + +L L + + GH D Sbjct: 50 EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADER-- 107 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA + L GVS D+IS +S + + + + NRR Sbjct: 108 -GTPEYNIALGERRASAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 165 Query: 336 IL 337 ++ Sbjct: 166 LV 167 >gi|45656521|ref|YP_000607.1| flagellar motor protein MotB [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599756|gb|AAS69244.1| sodium translocating Bacterial Flagellar Motor protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 275 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 18/164 (10%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + L+K + V G++IS++ F+ S+I + L Sbjct: 87 KALSKSKQLATELFKPEVEAGKVKITEDERGLIISLVSADY---FNPGSAILTDSIKIAL 143 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN---------IARDNWRLSLDRAYSAYQVLMK-S 302 +K ++ + + GH DA+ +NW L+ RA ++ ++ Sbjct: 144 RKASSLIKDLNRFVRVEGHCDANAVNPGVAPGKEERAYINNWDLAGARAINSTDYIINVE 203 Query: 303 GVSEDRISKISGFAHHRLK----IASDPMNSANRRIDILVEDRQ 342 + +S F R + + NRRIDI++ + Sbjct: 204 KLDPSWFQAVS-FGAFRPLVVEYAGTPEAKAYNRRIDIVIMTEK 246 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 33/90 (36%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + N+ + + Y D +T+L+ FF++++ T+ + I F Sbjct: 3 KSKCPECIQNIPEYMLTYGDMVTLLLCFFIMLYTTGKTNAIEMQIILSAFKTTTGFFDGG 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 + ++ + + ++K+ Sbjct: 63 QTLSKGRLEEMGMNIESLPSQTTGKALSKS 92 >gi|296117356|ref|ZP_06835946.1| peptidoglycan-associated lipoprotein [Gluconacetobacter hansenii ATCC 23769] gi|295976122|gb|EFG82910.1| peptidoglycan-associated lipoprotein [Gluconacetobacter hansenii ATCC 23769] Length = 157 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + + + L + LA + I I G+ D N L R Sbjct: 52 DRVFFELNQNSLSADAKATLDRQAAWLAKYPQVNIQIAGNCDDR---GTEEYNLALGQRR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANR 332 A +A+ L+ GV+ RI+ IS + R D S NR Sbjct: 109 ANAAHDYLVAKGVAASRITTIS-YGKDRPTAPGDDEASWSQNR 150 >gi|258593789|emb|CBE70130.1| Outer membrane lipoprotein omp16 precursor (peptidoglycan-associated lipoprotein) (modular protein) [NC10 bacterium 'Dutch sediment'] Length = 184 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 FD S + L + + L + I I GH D A N L R Sbjct: 77 KDIFFDFDKSTIRDDAKSSLNEDLQWLNANPTAQIVIEGHCDER---GTAEYNLGLGERR 133 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDR 341 A +A +M +G++ RI +S F R + NRR +V++R Sbjct: 134 AKAAKDYVMAAGINAKRIRTVS-FGKERPFATGHDESAWKWNRRAHFVVDER 184 >gi|329295949|ref|ZP_08253285.1| peptidoglycan-associated outer membrane lipoprotein [Plautia stali symbiont] Length = 172 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N F E +L + L + +I GH D N L Sbjct: 67 NNIVYFGLDKYDVQSEYAQMLDQHAAFLRSNPSYKVTIEGHADER---GTPEYNIALGER 123 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS ++S +S + + + + NRR ++ Sbjct: 124 RANAVKMYLQGKGVSAHQMSIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 171 >gi|315023542|gb|EFT36546.1| OmpA [Riemerella anatipestifer RA-YM] Length = 488 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 212 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 271 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 272 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 315 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 316 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 375 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 376 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 432 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 433 -KGVGSAEATVPASASNEERMKDRKVVV 459 >gi|225350134|gb|ACN87977.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|156106757|gb|ABU49601.1| outer membrane protein [Riemerella anatipestifer] Length = 387 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|126046387|gb|ABN73088.1| OmpA [Riemerella anatipestifer] gi|126046398|gb|ABN73090.1| OmpA [Riemerella anatipestifer] gi|126046413|gb|ABN73093.1| OmpA [Riemerella anatipestifer] gi|225350132|gb|ACN87976.1| OmpA [Riemerella anatipestifer] gi|225350136|gb|ACN87978.1| OmpA [Riemerella anatipestifer] gi|225350138|gb|ACN87979.1| OmpA [Riemerella anatipestifer] gi|225350142|gb|ACN87981.1| OmpA [Riemerella anatipestifer] gi|225350144|gb|ACN87982.1| OmpA [Riemerella anatipestifer] gi|225350148|gb|ACN87984.1| OmpA [Riemerella anatipestifer] gi|225350150|gb|ACN87985.1| OmpA [Riemerella anatipestifer] gi|225350152|gb|ACN87986.1| OmpA [Riemerella anatipestifer] gi|225350156|gb|ACN87988.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|119382554|gb|ABL73889.1| outer membrane protein A [synthetic construct] Length = 395 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|106647238|gb|ABF82272.1| outer membrane protein A precursor [Riemerella anatipestifer] gi|318068275|gb|ADV36925.1| outer membrane protein A [Riemerella anatipestifer] gi|318068277|gb|ADV36926.1| outer membrane protein A [Riemerella anatipestifer] Length = 387 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|126046419|gb|ABN73094.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD R A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VRGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|86739073|ref|YP_479473.1| OmpA/MotB [Frankia sp. CcI3] gi|86565935|gb|ABD09744.1| OmpA/MotB [Frankia sp. CcI3] Length = 187 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +FD +SS E + L +I + I++ G++D DN RLS DRA + Sbjct: 90 LFDSNSSELRREAVTALGQILPSIREHPGHIAVIGYSDGL---GRTEDNLRLSQDRAKAV 146 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 L G+ + ++ G +++ RR++I++ Sbjct: 147 ESWLATQGIPGS-VLEVEGKGEEG--AQDGVADASRRRVEIVLR 187 >gi|15641023|ref|NP_230654.1| sodium-type flagellar protein MotY [Vibrio cholerae O1 biovar El Tor str. N16961] gi|227081182|ref|YP_002809733.1| sodium-type flagellar protein MotY [Vibrio cholerae M66-2] gi|229505393|ref|ZP_04394903.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae BX 330286] gi|229510937|ref|ZP_04400416.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae B33] gi|229518058|ref|ZP_04407502.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae RC9] gi|229608412|ref|YP_002879060.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae MJ-1236] gi|254848138|ref|ZP_05237488.1| sodium-type flagellar protein MotY [Vibrio cholerae MO10] gi|255744790|ref|ZP_05418741.1| sodium-type flagellar protein MotY precursor [Vibrio cholera CIRS 101] gi|298498879|ref|ZP_07008686.1| sodium-type flagellar protein MotY [Vibrio cholerae MAK 757] gi|9655471|gb|AAF94169.1| sodium-type flagellar protein MotY [Vibrio cholerae O1 biovar El Tor str. N16961] gi|227009070|gb|ACP05282.1| sodium-type flagellar protein MotY [Vibrio cholerae M66-2] gi|229344773|gb|EEO09747.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae RC9] gi|229350902|gb|EEO15843.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae B33] gi|229357616|gb|EEO22533.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae BX 330286] gi|229371067|gb|ACQ61490.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae MJ-1236] gi|254843843|gb|EET22257.1| sodium-type flagellar protein MotY [Vibrio cholerae MO10] gi|255737821|gb|EET93215.1| sodium-type flagellar protein MotY precursor [Vibrio cholera CIRS 101] gi|297543212|gb|EFH79262.1| sodium-type flagellar protein MotY [Vibrio cholerae MAK 757] Length = 294 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 91/298 (30%), Gaps = 19/298 (6%) Query: 51 MWIINATDDDTKKAI-EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 ++ I+ A+ +Y ++ + E K Sbjct: 9 LFAISTLSASVASALEVRYMATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKI 68 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 ++D ++ + + + + + ++ +++ Sbjct: 69 NLDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSE 128 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 E P S + + ++ + +SS L + + + IS Sbjct: 129 LEKGRYPTFSYQDWQSRDQRIEVA-----LSSVLFQQPYNEFSDCISKLLPYSFEDISFT 183 Query: 230 DQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWR 286 +D+ S + L +I E + ++ ++ + +TD++ N + Sbjct: 184 ILH----YDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNS---QN 236 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS RA + G+ EDRI ++ G+ R + NRR+ I + Q Sbjct: 237 LSEQRAEVLREYFKSIGLPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293 >gi|260428791|ref|ZP_05782768.1| OmpA domain protein [Citreicella sp. SE45] gi|260419414|gb|EEX12667.1| OmpA domain protein [Citreicella sp. SE45] Length = 174 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + F S P+ L + L +++ +++ GH D N L R Sbjct: 64 DRVFFAVDQSTLSPQAQATLDAQAQWLMTNSDYLAVIEGHADEQ---GTREYNIALGARR 120 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 A + + L+ G++ +R+ IS + R S NRR Sbjct: 121 ANATMEYLVSKGIASNRLRFIS-YGKERPVEVCAEEACYSKNRR 163 >gi|229903102|ref|ZP_04518216.1| Outer membrane protein A precursor [Yersinia pestis Nepal516] gi|229679844|gb|EEO75946.1| Outer membrane protein A precursor [Yersinia pestis Nepal516] Length = 205 Score = 73.1 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F + + PE L ++ L+ + + G D N LS Sbjct: 77 KSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRI---GQPAPNLALS 133 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------NRRIDIL 337 RA S L+ G+ D+I+ G + P + +RR++I Sbjct: 134 QRRADSVRDYLVSKGIPADKITA-RGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIE 192 Query: 338 VED 340 V+ Sbjct: 193 VKG 195 >gi|162451716|ref|YP_001614084.1| hypothetical protein sce3444 [Sorangium cellulosum 'So ce 56'] gi|161162298|emb|CAN93603.1| putative membrane protein [Sorangium cellulosum 'So ce 56'] Length = 357 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 4/109 (3%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F P + +L + ++L ++ + + N A L+ RA + Sbjct: 135 FVAGKPEFEPASQGLLANVAQILKDHPQIQFVEVAAYSEKVGNDAATV-TLTKKRAEAVV 193 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQG 343 + L GV ++R+ + +G+ H + + NRR++I + G Sbjct: 194 KALTALGVEKNRV-RAAGYGAHCATDPGETEEAKEKNRRVEIKIMRLDG 241 >gi|153840578|ref|ZP_01993245.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus AQ3810] gi|149745760|gb|EDM56890.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus AQ3810] Length = 245 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 62/158 (39%), Gaps = 10/158 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 + Q ++I LS ++ + + S D T + +++ + Sbjct: 92 QDWQSRDQRIEVALSSVLFQ-SKYNAFSDCIANLLKYSFEDIAFTILHYERQGDQLTKAS 150 Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L +I + + H+ ++ + +TD++ ++ ++ LS RA S G+ E Sbjct: 151 KKRLAQIADYVRHNQDIDLVLVATYTDSTDGKSESQS---LSERRAESLRTYFESLGLPE 207 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 DRI ++ G+ R + NRR+ I + Q Sbjct: 208 DRI-QVQGYGKRRPIADNGTPIGKDKNRRVVISLGRTQ 244 >gi|27375465|ref|NP_766994.1| hypothetical protein blr0354 [Bradyrhizobium japonicum USDA 110] gi|27348602|dbj|BAC45619.1| blr0354 [Bradyrhizobium japonicum USDA 110] Length = 250 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 70/253 (27%), Gaps = 20/253 (7%) Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 P + + + + +++ + L Sbjct: 7 PGGPIAGILEPRSSAAQEGLAMRSAAKGLTAILSIMAIGAALSLPASPAFAGDDGNSKNV 66 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + K + P S+ K++ R + + L+ ++ Sbjct: 67 TEDEIVRALAPPQKKPLTRGLSIAPQADPAPSASETKLIQSVRGRSTRSLSSTEREEIAS 126 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 + D + IS + ++ P+ Sbjct: 127 VAKDKPNIDLEITFDYNSANISTKSLASVQ--ALGRALTSPDLK-------------GST 171 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324 + GHTDA N LS RA + + L++ +S + + G+ +LK S Sbjct: 172 FVVAGHTDA---AGGESYNQDLSERRADAIKRYLVEKYSISATDLVTV-GYGKSKLKDPS 227 Query: 325 DPMNSANRRIDIL 337 PM NRR+ ++ Sbjct: 228 QPMAEVNRRVQVV 240 >gi|322833830|ref|YP_004213857.1| peptidoglycan-associated lipoprotein [Rahnella sp. Y9602] gi|321169031|gb|ADW74730.1| peptidoglycan-associated lipoprotein [Rahnella sp. Y9602] Length = 170 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277 + + + + + N F E +L L + ++ GH D Sbjct: 52 EEQARLQMQELQKNNIVYFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTVEGHADER-- 109 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA + L GVS D+IS +S + + + + NRR Sbjct: 110 -GTPEYNIALGERRATAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAV 167 Query: 336 IL 337 ++ Sbjct: 168 LV 169 >gi|294012218|ref|YP_003545678.1| OmpA-family protein [Sphingobium japonicum UT26S] gi|292675548|dbj|BAI97066.1| OmpA-family protein [Sphingobium japonicum UT26S] Length = 236 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 7/105 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYS 294 FD + PLPE + + + A + G+TD R N LSL RA + Sbjct: 132 FFDWNMDTPLPEGAGTISTLTQTAAQCGWTRFGVTGYTDT---SGSNRYNDGLSLRRARN 188 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 ++ + GVS D I ++G +LKI + NRR++I Sbjct: 189 VASLMSQGGVSADAI-TVTGLGETQLKIETADGVREPMNRRVEIT 232 >gi|291616741|ref|YP_003519483.1| Pal [Pantoea ananatis LMG 20103] gi|291151771|gb|ADD76355.1| Pal [Pantoea ananatis LMG 20103] Length = 192 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N F + +L + L + +I GH D N L Sbjct: 87 NNIVYFGLDKYDVQSDYAQMLDQHANFLRSNPSYKVTIEGHADER---GTPEYNIALGER 143 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D++S +S + + + + NRR ++ Sbjct: 144 RANAVKMYLQGKGVSADQMSIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 191 >gi|289625247|ref|ZP_06458201.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330870468|gb|EGH05177.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 647 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 85/294 (28%), Gaps = 19/294 (6%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 +E + +T S + +R++ ++ + + ++ + + + Sbjct: 356 FARLESVMLKPTADNLTRSLYLLSSIKIYQRNAPTLTTVTGIDSVEPRALPVDNRAQSVA 415 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + LS +Q+ + L + + Sbjct: 416 TFGKTTLDTYLMLSKAQREQADPAVLKARIPDYWYPAIYKQVPHDTGMSAQAAGEVDDYQ 475 Query: 182 KILAMKRKKRLQDLAKKISSTLSGL-VADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 Q + L+ + + + +++ I I + +F Sbjct: 476 FAGRQIAFYSDQIRELDVPRILNNAFLISSSRNYINSLLSQSLRAIETITLESDTLFAFG 535 Query: 241 SSIPLP---ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + L I L ++ I I GH D A+ N ++S RA + Sbjct: 536 RADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQI---GDAQSNLQVSKQRAQTI 592 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340 L+ G+ + + + G ++ + D NRR++I V Sbjct: 593 KTYLVGKGLPSELVDAV-GEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEVRA 645 >gi|229523853|ref|ZP_04413258.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae bv. albensis VL426] gi|229337434|gb|EEO02451.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholerae bv. albensis VL426] Length = 172 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + T F ++ + +L L + ++I GH D N L Sbjct: 66 ENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADER---GTPEHNIALGE 122 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + L GV ++S +S + + + + NRR ++ Sbjct: 123 RRAQAVAKYLEALGVQAGQLSIVS-YGEEKPLVLGQSEEAYAKNRRAVLV 171 >gi|224534380|ref|ZP_03674958.1| outer membrane protein [Borrelia spielmanii A14S] gi|224514482|gb|EEF84798.1| outer membrane protein [Borrelia spielmanii A14S] Length = 381 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 10/147 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I + + + + +K + E GI +S+ + F +S L + L I Sbjct: 242 DNFIETEVENYIQEKKIKAISVEKNNKGINLSLDIE-----FYPNSFQILQKEYKKLDLI 296 Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++L I I GHT+ + + + LS RA + L+K V G Sbjct: 297 AKLLEKFKKNNILIEGHTEQF---GLEEEMYELSEKRARAIGNYLIKMKVKNKDQILFKG 353 Query: 315 FAHHRLKIA-SDPMNSANRRIDILVED 340 + + K S P+ + NRR++I + + Sbjct: 354 WGSQKPKYPKSSPLKAKNRRVEITILN 380 >gi|298369983|ref|ZP_06981299.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314] gi|298281443|gb|EFI22932.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314] Length = 227 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 5/85 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F I PE L + + L + E + + GHTD F + N LS RA Sbjct: 68 LFGFDKDILRPEAKESLNALAQRLSNSNVESVRVEGHTD---FMGSEQYNQALSERRANV 124 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 L+ GV+ ++IS + G + Sbjct: 125 VANYLVNQGVASNKISAV-GLGESQ 148 >gi|114327771|ref|YP_744928.1| peptidoglycan-associated lipoprotein [Granulibacter bethesdensis CGDNIH1] gi|114315945|gb|ABI62005.1| peptidoglycan-associated lipoprotein [Granulibacter bethesdensis CGDNIH1] Length = 196 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + + + S + L + L +V + G+ D N L R Sbjct: 91 DRVFYAFNQSSLSTDAQGTLDRQSAWLQKYPQVSVQVAGNCDDR---GTEEYNLALGQRR 147 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANR 332 A +A L+ GV+ RI+ IS + R + + NR Sbjct: 148 ANAARDFLVAKGVASSRITTIS-YGKDRPTAVGDDEQAWAQNR 189 >gi|323496601|ref|ZP_08101654.1| peptidoglycan-associated lipoprotein [Vibrio sinaloensis DSM 21326] gi|323318347|gb|EGA71305.1| peptidoglycan-associated lipoprotein [Vibrio sinaloensis DSM 21326] Length = 175 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++ + +L L+ + ++I GH D N L RA + Sbjct: 75 FAFDNATIAGDYEEMLAAHAAYLSKNPALKVTIEGHADER---GTPEYNIALGERRATAV 131 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + L GV D+IS +S + + + + + NRR ++ Sbjct: 132 AKYLQALGVQADQISIVS-YGEEKPLLLGQDEDVYAKNRRAVLV 174 >gi|258622021|ref|ZP_05717050.1| sodium-type flagellar protein MotY [Vibrio mimicus VM573] gi|258627110|ref|ZP_05721906.1| sodium-type flagellar protein MotY [Vibrio mimicus VM603] gi|262165241|ref|ZP_06032978.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus VM223] gi|258580628|gb|EEW05581.1| sodium-type flagellar protein MotY [Vibrio mimicus VM603] gi|258585774|gb|EEW10494.1| sodium-type flagellar protein MotY [Vibrio mimicus VM573] gi|262024957|gb|EEY43625.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus VM223] Length = 294 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 11/161 (6%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + R Q + +S+ L + + + IS S Sbjct: 140 QDWQSRDQRIEVALSAVLFQQPYNEFSDCISKLLPYSFEDISFTILHYD---QGDSVELN 196 Query: 246 PETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + L +I E + +++++ + +TD++ N + LS RA + G Sbjct: 197 KASQKRLAQIAEYVRYNSDIDLVLVSTYTDSTDTNNNS---QNLSEKRAEVLREYFKSIG 253 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + EDRI ++ G+ R + NRR+ I + Q Sbjct: 254 LPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293 >gi|240949813|ref|ZP_04754142.1| major outer membrane protein [Actinobacillus minor NM305] gi|240295730|gb|EER46425.1| major outer membrane protein [Actinobacillus minor NM305] Length = 372 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +F S P L + I + G+ D N +LS Sbjct: 249 SDVLFAFGKSSLKPAAAQALDAANNEINALGLANPAIQVNGYADRI---GKQAANLKLSQ 305 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + L+ G + ++ + G+ + + +RR+++ V Sbjct: 306 RRAETVANYLVSKGQNAANVTAV-GYGSANPVTGNTCDAVKGRKALIACLAPDRRVEVQV 364 Query: 339 EDRQ 342 + + Sbjct: 365 QGSK 368 >gi|225350154|gb|ACN87987.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 72/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENDGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|207725016|ref|YP_002255413.1| chemotaxis (motility protein b) transmembrane (partial sequence) [Ralstonia solanacearum MolK2] gi|206590245|emb|CAQ37206.1| probable chemotaxis (motility protein b) transmembrane (partial sequence) [Ralstonia solanacearum MolK2] Length = 81 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 32/54 (59%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK 62 + + I+ ++ ++ G+WKI YADF+T +MAFFL+MW++++ Sbjct: 3 KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAEL 56 >gi|163737130|ref|ZP_02144548.1| OmpA domain protein [Phaeobacter gallaeciensis BS107] gi|161389734|gb|EDQ14085.1| OmpA domain protein [Phaeobacter gallaeciensis BS107] Length = 326 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + + L + E L + + + GHTD N +S RA + Sbjct: 222 FETGAVTLGAKPYDSLAALAEFLIQNPDFDVLLVGHTDTV---GSLEQNIAISERRADAV 278 Query: 296 -YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 ++L S V R+ ++G + NRR+++++ R Sbjct: 279 RRRLLADSAVDRARV-AVAGAGFMAPLTTNLTPEGREANRRVEVVLIRR 326 >gi|77361038|ref|YP_340613.1| component of sodium-driven polar flagellar motor [Pseudoalteromonas haloplanktis TAC125] gi|76875949|emb|CAI87171.1| putative Component of sodium-driven polar flagellar motor [Pseudoalteromonas haloplanktis TAC125] Length = 292 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 10/154 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 + Q+ A KI+ +SG+ + + S D T M + +SS + Sbjct: 141 QDWQNSADKIAVGMSGVNFKQ-AYWAFLQCRDELLPYSFEDISFTVMNYQSNSSKLTKSS 199 Query: 249 IVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L KI E L + E I+I +TD+ +N LS RA + ++ GV E Sbjct: 200 QQRLDKIAEYLKNDPSIESINIASYTDSY---GGRWNNLDLSKTRAKAIKDYMISLGVDE 256 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 ++ G R +D + NRR+ I + Sbjct: 257 TKVHT-DGLGEKRFVDTNDTILGRNKNRRLVIQI 289 >gi|163794140|ref|ZP_02188113.1| hypothetical protein BAL199_01964 [alpha proteobacterium BAL199] gi|159180754|gb|EDP65273.1| hypothetical protein BAL199_01964 [alpha proteobacterium BAL199] Length = 250 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 12/142 (8%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + L D +++ ++I++ +F+ + + ++ L Sbjct: 108 AKLSGDPVLRTARIVRAGDRLIITLPSDL---LFEAGQARLSTTARSAVAELATALVTLP 164 Query: 264 EVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL- 320 I + GH D P N LSL RA + L+ +G+ R+ + G R Sbjct: 165 NRIDVVGHADPRPIPPGAPFGTNRALSLARADAVAVALVDAGL--SRMPTVEGMGDSRFY 222 Query: 321 -KIASDPMN---SANRRIDILV 338 + PM + RR+D+++ Sbjct: 223 TIAPTAPMERRYALARRVDVVL 244 Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 6/50 (12%), Positives = 19/50 (38%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 SW + D +++++AFF++ + + + + + Sbjct: 19 RRAGRKYGGGPSWLVTLVDLVSLMLAFFVMRFAMTSIESPRFDEAAASIS 68 >gi|50235095|gb|AAT70750.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 73/268 (27%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T + ++ + + Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + ++ F + S PE+ L Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGAFQGIFFHFNKSSIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GVS ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|32472143|ref|NP_865137.1| outer membrane protein A (OmpA) [Rhodopirellula baltica SH 1] gi|32397515|emb|CAD72821.1| probable outer membrane protein A (OmpA) [Rhodopirellula baltica SH 1] Length = 259 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 80/259 (30%), Gaps = 14/259 (5%) Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 QNP + N + ++ N++ Q N +Q + + Sbjct: 4 SQNPYLAGGGTSVWQPPPSTTAVNGIQAQVAELNRRVQLLDDNNRQLTTQLAQSEQQSQV 63 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + K L +T +S + A R ++ Sbjct: 64 YRDELNLVRKQLSDTTQQYESARIAAQDAQTQARSFQASAQMRGGATIRANTNLNQMAGR 123 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-- 263 L + E + + + + +F + + P +L L Sbjct: 124 LNLGGLK----VEQDGEVLRVVLPSDQ---LFAQGTGQLQPSAGAILDPTAAQLRSVFPR 176 Query: 264 EVISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK 321 + I I G+TD +P + A +L+ + + L + G+ E ++ ++ + + Sbjct: 177 QRIGIEGYTDNAPMYGGAAGSAHQLTSAQTGAVLDWLTRRSGMPEQQLFTVA-QGSNNPR 235 Query: 322 IASDPMNSA--NRRIDILV 338 + NRRI++++ Sbjct: 236 KDNTTPAGRVANRRIELVI 254 >gi|220904130|ref|YP_002479442.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868429|gb|ACL48764.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 155 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 7/105 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 F + +L++ G++L + I G+ D N L Sbjct: 47 DGRVYFAFDKFNVENQYKEMLKQKGDLLKQYPAIRVRIEGNCDDR---GTQEYNLALGER 103 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 RA +AY+ L+ GV+ +++ IS + + ++ + NRR Sbjct: 104 RARAAYEYLVMMGVNPNQLEMIS-YGKENPAVQGNNEAAWAKNRR 147 >gi|45656096|ref|YP_000182.1| peptidoglycan associated cytoplasmic membrane protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|30984127|dbj|BAC76763.1| OmpA family outer membrane lipoprotein [Leptospira interrogans serovar manilae] gi|45599329|gb|AAS68819.1| peptidoglycan associated cytoplasmic membrane protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 195 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 52/174 (29%), Gaps = 19/174 (10%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + +++ + + +AD++ + + D Sbjct: 22 SSAEKKEESAAPEPSTQEQSAAANRNVDVNSPEAIADSLNEKLKDFRYP--------DGL 73 Query: 233 NTPMFDKSSSIPLP-ETIVVLQKIGEVLAHSTEVI------SIRGHTDA---SPFRNIAR 282 P F + P + + V+ + I GHTDA + Sbjct: 74 TRPGFSYKKADVTPGDFSEWSKTNAPVIKEGLGKLPDSYALEITGHTDAIGPEQAEGAKK 133 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 N S RA + Q L+K G+ +RI G D ++ NRR+ Sbjct: 134 GNIFYSELRANAVKQALIKQGIPANRIVT-KGAGSSEPVSGLDAKDAKNRRVTF 186 >gi|85713237|ref|ZP_01044263.1| Sodium-type flagellar protein motY precursor [Idiomarina baltica OS145] gi|85692932|gb|EAQ30904.1| Sodium-type flagellar protein motY precursor [Idiomarina baltica OS145] Length = 303 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 8/99 (8%) Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S + L++I + L ++ + +TDA N L+ RA + Sbjct: 197 DSDELTAPSQRKLKQISDYLKVDADLKLVLIDSYTDAL---GAREPNQTLTEQRANAIKS 253 Query: 298 VLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRI 334 ++ G+ DRI ++ R ++ NRR+ Sbjct: 254 FFVERGIKADRIQTVA-HGEDRPIDHNDNEIGRQKNRRV 291 >gi|262402652|ref|ZP_06079213.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC586] gi|262351434|gb|EEZ00567.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC586] Length = 294 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 11/161 (6%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + R Q + +S+ L + + + IS S Sbjct: 140 QDWQSRDQRIEVALSAVLFQQPYNEFSDCISKLLPYSFEDISFTILHYD---QGDSVELN 196 Query: 246 PETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + L +I E + +++++ + +TD++ N + LS RA + G Sbjct: 197 KASQKRLAQIAEYVRYNSDIDLVLVSTYTDSTDTNNNS---QNLSEKRAEVLREYFKSIG 253 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + EDRI ++ G+ R + NRR+ I + Q Sbjct: 254 LPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293 >gi|167644831|ref|YP_001682494.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31] gi|167347261|gb|ABZ69996.1| OmpA/MotB domain protein [Caulobacter sp. K31] Length = 409 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289 + F + PE V+ + + + I + GHTD + N +LS Sbjct: 301 REFVVYFPFDQYVLTPEAQAVVSQAADYAKGGNATKIVVVGHTDT---SGSPKYNAKLSE 357 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA + L+ +GV+ + + +A+ NRR I + Sbjct: 358 RRAKAVADGLVGAGVAATTL-AVDWKGESEPAVATGDGVKEPLNRRSTISI 407 >gi|326315314|ref|YP_004232986.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372150|gb|ADX44419.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 379 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + LP++ ++++ ++L +++ G+TD + A N LS RA + Sbjct: 277 FATDKTDILPDSQPQIEQVVQLLRQDASLKLAVNGYTDNT---GDAAHNKTLSEGRAKAV 333 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + G+ R+S GF + + NRR++++ Sbjct: 334 AAAVAAQGIDASRLSSA-GFGAADPVADNATDEGKAKNRRVELV 376 >gi|30314442|gb|AAP15430.1| outer membrane lipoprotein precursor [Burkholderia pyrrocinia] Length = 149 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 47 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + NRR D++ Sbjct: 104 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 146 >gi|326794029|ref|YP_004311849.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] gi|326544793|gb|ADZ90013.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] Length = 272 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 88/229 (38%), Gaps = 9/229 (3%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 + + K + + +++ S+ + + R ++ + + + + Sbjct: 24 NPSAKPSDANYPMPLHFTEHARLSDALRIATVRVNQLEHSGGEECMPGRIYRMHKLLEMA 83 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI--LISIIDQRNT 234 + L L+ L ++I + GLV + L E + ++ ++++ + Sbjct: 84 NGEHQTGLHEDAALNLRALDQQIENAEKGLVFLHARTTCLGEAHDDVLADILPLLERISR 143 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F +S+ +L ++ + L + +++ GHTD+ +N L+LDRA Sbjct: 144 TNFASASAAMPDAMPPLLDELAKWLILNPHYKVTLVGHTDSQ---GSIEENEHLALDRAA 200 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 + + L+ V ++ + +G + S NRR+++ V Sbjct: 201 TISRYLIAHNVDAHQL-RCNGEGPWNPISHNASEQSRKYNRRVEVDVSR 248 >gi|318068279|gb|ADV36927.1| outer membrane protein A [Riemerella anatipestifer] Length = 387 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVSDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAEDNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|153875989|ref|ZP_02003535.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152067548|gb|EDN66466.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 58 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 RA + L+ G++ +R+ GF + + NRR++I++ + Sbjct: 2 RRAKTVRNYLINRGINSERLIA-KGFGEKQPIATNATNAGRQQNRRVEIIILN 53 >gi|325915597|ref|ZP_08177905.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas vesicatoria ATCC 35937] gi|325538157|gb|EGD09845.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Xanthomonas vesicatoria ATCC 35937] Length = 439 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 13/116 (11%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + +FD S P+ + VL + L T + + +RGHTDA + N LS Sbjct: 328 NDRILFDFDKSDIRPDAVRVLDTLAAALGKVTTQQMEVRGHTDA---KGDDAYNQALSER 384 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------DP-MNSANRRIDILVE 339 RA++ L G ++ +K G + + +P NRR++I + Sbjct: 385 RAHAVLAALRTRGAAQGAGAKGYG--ESQPVAPNTVNGQDNPGGRQLNRRVEIFLR 438 >gi|167374419|gb|ABZ79139.1| outer membrane protein [Riemerella anatipestifer] Length = 338 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 88 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 147 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 148 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 191 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 192 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 251 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 252 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 308 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 309 -KGVGSAEATVPASASNEERMKDRKVVV 335 >gi|167374413|gb|ABZ79136.1| outer membrane protein [Riemerella anatipestifer] Length = 338 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 73/268 (27%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 88 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 147 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T + ++ + + Sbjct: 148 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 191 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + ++ F + S PE+ L Sbjct: 192 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGALQGIFFHFNKSSIRPESNTKL 251 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GVS ++ Sbjct: 252 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 308 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 309 -KGVGSAEATVPASASNEERMKDRKVVV 335 >gi|50235099|gb|AAT70752.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 73/268 (27%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T + ++ + + Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + ++ F + S PE+ L Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGALQGIFFHFNKSSIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GVS ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|50235107|gb|AAT70756.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 73/268 (27%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T + ++ + + Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + ++ F + S PE+ L Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGALQGIFFHFNKSSIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GVS ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|322379220|ref|ZP_08053611.1| Peptidoglycan-associated lipoprotein [Helicobacter suis HS1] gi|321148360|gb|EFX42869.1| Peptidoglycan-associated lipoprotein [Helicobacter suis HS1] Length = 181 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 6/118 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 I F + ++ + + + S + + G+TD N Sbjct: 67 QIESGTVVGQVYFSFDKYDIRADMESIIDQAAQKIKESQMKVLLEGNTDEF---GSGEYN 123 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVED 340 + L+ RA S Q L+ G+++D I ++ + + + NRR+DI V + Sbjct: 124 FALANKRALSVKQALIIKGIAQDTI-RVVSLGETKPSCQEKNKTCYRKNRRVDIKVVE 180 >gi|311280760|ref|YP_003942991.1| SmpA/OmlA domain-containing protein [Enterobacter cloacae SCF1] gi|308749955|gb|ADO49707.1| SmpA/OmlA domain-containing protein [Enterobacter cloacae SCF1] Length = 265 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 15/117 (12%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDR 291 +F S+ L+++ + + + I GH D N ++N LSL R Sbjct: 153 SLFGFGSATLSRTGETELRRMIAQIQEQHIPVKRVLITGHAD--RIGNSEKNN-ALSLAR 209 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNS------ANRRIDILVED 340 A + +L+ G+ E + + G + + + + NRRI I + + Sbjct: 210 AEAVKTLLVAQGIPEA-LVETRGVGASQPLVVCPGETTPAVVACLEKNRRITINILE 265 >gi|251792474|ref|YP_003007200.1| Plp4 [Aggregatibacter aphrophilus NJ8700] gi|247533867|gb|ACS97113.1| Plp4 [Aggregatibacter aphrophilus NJ8700] Length = 278 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 14/112 (12%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292 +FD + V+ K+ L S + + + G+TD N LS RA Sbjct: 142 DFLFDFDKDTLTEKGKEVVDKVAAQLKESKAQEVKVAGYTDRL---GSESYNMDLSQRRA 198 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA------NRRIDI 336 L + GV +IS + G +++ N NRR++I Sbjct: 199 NRVKARLTEQGVDA-QISAV-GHGEAHQVKACSNEKGNKLISCLRPNRRVEI 248 >gi|319776072|ref|YP_004138560.1| Outer membrane protein, OmpA/MotB [Haemophilus influenzae F3047] gi|319896881|ref|YP_004135076.1| outer membrane protein, ompa/motb [Haemophilus influenzae F3031] gi|329123235|ref|ZP_08251803.1| lipoprotein PlpD [Haemophilus aegyptius ATCC 11116] gi|317432385|emb|CBY80740.1| Outer membrane protein, OmpA/MotB [Haemophilus influenzae F3031] gi|317450663|emb|CBY86883.1| Outer membrane protein, OmpA/MotB [Haemophilus influenzae F3047] gi|327471444|gb|EGF16892.1| lipoprotein PlpD [Haemophilus aegyptius ATCC 11116] Length = 284 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 17/116 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + ++ K+ L + + I I G+TD N LS R Sbjct: 148 GDFLFDFDKDTLSEKGKKIIDKVSYQLKSNGAKDIKIAGYTDRL---GTDSYNLELSQRR 204 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSA--------NRRIDIL 337 A S L+K GV+ +I+ I G+ +I +D NRR++I+ Sbjct: 205 ANSVKNHLVKDGVTA-QITAI-GYGK-NPQIKSCNDVPQGKALKDCLHPNRRVEII 257 >gi|270723293|ref|ZP_06223417.1| conserved hypothetical protein [Haemophilus influenzae HK1212] gi|270315265|gb|EFA27588.1| conserved hypothetical protein [Haemophilus influenzae HK1212] Length = 149 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 17/116 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + ++ K+ L + + I I G+TD N LS R Sbjct: 33 GDFLFDFDKDTLSEKGKKIIDKVSYQLKSNGAKDIKIAGYTDRL---GTDSYNLELSQRR 89 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSA--------NRRIDIL 337 A S L+K GV+ +I+ I G+ +I +D NRR++I+ Sbjct: 90 ANSVKNHLVKDGVTA-QITAI-GYGK-NPQIKSCNDVPQGKALKDCLHPNRRVEII 142 >gi|262171987|ref|ZP_06039665.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus MB-451] gi|261893063|gb|EEY39049.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus MB-451] Length = 286 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 11/161 (6%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + R Q + +S+ L + + + IS S Sbjct: 132 QDWQSRDQRIEVALSAVLFQQPYNEFSDCISKLLPYSFEDISFTILHYD---QGDSVELN 188 Query: 246 PETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + L +I E + +++++ + +TD++ N + LS RA + G Sbjct: 189 KASQKRLAQIAEYVRYNSDIDLVLVSTYTDSTDTNNNS---QNLSEKRAEVLREYFKSIG 245 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + EDRI ++ G+ R + NRR+ I + Q Sbjct: 246 LPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 285 >gi|259090555|gb|ACV91900.1| OprL [Pseudomonas fluorescens] gi|259090583|gb|ACV91914.1| OprL [Pseudomonas fluorescens] gi|309244355|gb|ADO52182.1| OprL [Pseudomonas poae] gi|309244357|gb|ADO52183.1| OprL [Pseudomonas poae] gi|309244359|gb|ADO52184.1| OprL [Pseudomonas trivialis] gi|309244361|gb|ADO52185.1| OprL [Pseudomonas trivialis] gi|309244363|gb|ADO52186.1| OprL [Pseudomonas trivialis] gi|309244365|gb|ADO52187.1| OprL [Pseudomonas trivialis] gi|309244367|gb|ADO52188.1| OprL [Pseudomonas trivialis] gi|309244369|gb|ADO52189.1| OprL [Pseudomonas trivialis] gi|309244371|gb|ADO52190.1| OprL [Pseudomonas sp. 'ribotype C P501-02'] gi|309244373|gb|ADO52191.1| OprL [Pseudomonas sp. 'ribotype C P515-18'] gi|309244375|gb|ADO52192.1| OprL [Pseudomonas sp. 'ribotype C P527-22'] Length = 157 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 4/87 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 67 FEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 123 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIA 323 + L+ GV+ ++ +S + R Sbjct: 124 RYLVLQGVAPGQLELVS-YGKERPVAT 149 >gi|251733503|emb|CAR82501.1| pal [Ensifer adhaerens] Length = 87 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ + L + + LA +++ GH D N L RA S Sbjct: 1 TDSTSIRADAQQTLDRQAQWLAKYPNYAVTVEGHADER---GTREYNLALGARRAASTKD 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322 L+ GV +R+ IS + + Sbjct: 58 YLISRGVPANRLKTIS-YGKEKPVA 81 >gi|193227219|gb|ACF16394.1| outer membrane protein P6 [Pasteurella pneumotropica] Length = 156 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 + + NT F E + +L L + + + G+TD N Sbjct: 47 LQQRYNTVYFGFDKYNIEGEYVQILDAHAAYLNATPASKVIVEGNTDER---GTPEYNIA 103 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRR 333 L RA + L GV ++S +S + + + + NRR Sbjct: 104 LGQRRADAVKSFLAGKGVEGSKVSTVS-YGEEKPAVLGHDEAAYSKNRR 151 >gi|312885105|ref|ZP_07744791.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309367234|gb|EFP94800.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 1569 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 84/297 (28%), Gaps = 25/297 (8%) Query: 54 INATD-DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 + + D + I N L G Q + S+ Sbjct: 445 LASIDFIEKANKISNVLNTAESALNRPIFGPVSPQTRALIDLPDIFPNLDTLRFRNTSLR 504 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 I + + + + S+H + + + + L K T + + Sbjct: 505 PFIEKVGKAGGFLLDKPLTAVTAFYTLSQHSGSKANSEKKNNEFLDKITAYSLATS---- 560 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 L S + K+K Q + + L+ L + V V + + Sbjct: 561 -SLQRTSLQAAQDDKKKSEYQAVVTSLREELNKLSYQDGVSIVEGTVGDLKVRL----DA 615 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSL 289 F+ L E Q IG LA I I GHT N LS+ Sbjct: 616 THFAFNSDKIQVLEEKGNPYQTIGANLAKIAHSPFQIVIAGHTCDI---GSEEVNLNLSM 672 Query: 290 DRAYSAYQVLMKSGVSEDR-----ISKISGFAHHRLK----IASDPMNSANRRIDIL 337 RA + ++ + E R + + ++ + NRR++IL Sbjct: 673 KRAIAVKNAILNAISGEGRQAWEGMFVTEAHGFSKPLPGNENRNEHERAKNRRVEIL 729 >gi|194435106|ref|ZP_03067342.1| OmpA family protein [Shigella dysenteriae 1012] gi|194416637|gb|EDX32770.1| OmpA family protein [Shigella dysenteriae 1012] gi|332089196|gb|EGI94303.1| ompA family protein [Shigella dysenteriae 155-74] Length = 127 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 19 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 76 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTVQGRAENRRVAVVITTP 127 >gi|89076780|ref|ZP_01163047.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34] gi|89047578|gb|EAR53193.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34] Length = 139 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 7/126 (5%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD 273 V +++ T + S E LQ + + L + G+T Sbjct: 1 VDTAPPVQAATVTVEPSTVTIAYSVDSKHLTEEDKHRLQPMIQRLTRYPSATAEVTGYTS 60 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSAN 331 + N +LS RA + ++L + ++I+ G +D + N Sbjct: 61 NT---GSEAYNLKLSEKRAKNVAELLSQYVADANQITS-KGIGEANSIATNDTAKGRAEN 116 Query: 332 RRIDIL 337 RR++I Sbjct: 117 RRVEIY 122 >gi|330810626|ref|YP_004355088.1| hypothetical protein PSEBR_a3732 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378734|gb|AEA70084.1| Conserved hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 449 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 84/287 (29%), Gaps = 16/287 (5%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 + + G DEQ+ + + + + + + + Sbjct: 168 FSGEAKTWEAVGGAGGPIHLYARDEQSGTYDTFKELVLSRQGKRLDPTARRFESSEQLSD 227 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD-----LCKSTDLEKSINKEENYFLP 176 Q + F + + DS+ + L + + Sbjct: 228 AVSQDPQGIGFIGLPYVRQAKALAIVDGDSQPMLPLNNLIATEDYPLSRRLFFYLPPQAT 287 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 E ++A + ++ Q + + A + L + Sbjct: 288 NPWAEALVAFTQSEQGQTIVAANGFIAQTVQAMAVTPNALMPEGYQALSRHAQRLTVNFR 347 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293 F++ S+ + L ++ + + + + G DA A LS RA Sbjct: 348 FEEGSASLDNKAHQDLGRVFDYIKQHGKTDRSVTLVGFGDAKDDPARADL---LSKLRAM 404 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 + + L+K GV+ + ++ GF A+ D NRR+++ V Sbjct: 405 AVRRELVKYGVA---LREVRGFGALMPVAANSEDAGRVRNRRVEVWV 448 >gi|295096555|emb|CBK85645.1| peptidoglycan-associated lipoprotein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 173 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 68 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 172 >gi|149178718|ref|ZP_01857301.1| hypothetical protein PM8797T_01394 [Planctomyces maris DSM 8797] gi|148842416|gb|EDL56796.1| hypothetical protein PM8797T_01394 [Planctomyces maris DSM 8797] Length = 242 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 5/110 (4%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLD 290 F + S+ PE L I E+L + + +RGH P + D+ LS Sbjct: 121 GAACFGRFSAELTPEIKQKLDIIAEILLPTPNRLIVRGHASPEPLPKDSKFLDSQELSFY 180 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNS-ANRRIDILV 338 RA + + L G+ +R+ +S + I +P NRR+D+ + Sbjct: 181 RAKNVAEYLESKGIEPERLI-VSSVGDAEPRTITRNPEEQYLNRRVDVFL 229 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 2/119 (1%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT--DDDTKKAIEQYFNPFGKNLMTAS 80 +D P + W + Y D M++L+ FF+++ ++ D+ + +A+ + Sbjct: 5 EEDAPPGVPEWVVTYGDMMSLLLTFFIMLVSMSEIRNDEGSVRAMLDSLRERFGTHQGTA 64 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 +P S+ S + TK + G K +R+ Sbjct: 65 AVPGKSLDPTSNQSKPASKGSSSDGGTKTGKEKSSGGGGPNKTVERINTGTEVTLGGAA 123 >gi|71281747|ref|YP_267714.1| ompA family protein [Colwellia psychrerythraea 34H] gi|71147487|gb|AAZ27960.1| ompA family protein [Colwellia psychrerythraea 34H] Length = 562 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 9/106 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++ + L ++ + + + G +D+ N LS RA S Sbjct: 463 FAYATKELDNKGKRDLLRLVDFMEDHQSSRIVLMGFSDSV---GAQVKNTHLSYQRAKSV 519 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVE 339 L G+ + + ++ + NRR+++ + Sbjct: 520 ELALTSRGIP---VLAVEAMGEALPIANNNTEDGRKRNRRVEVWLL 562 >gi|329113829|ref|ZP_08242600.1| Outer membrane lipoprotein Omp16 [Acetobacter pomorum DM001] gi|326696839|gb|EGE48509.1| Outer membrane lipoprotein Omp16 [Acetobacter pomorum DM001] Length = 160 Score = 73.1 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + +D + S + LQK + LA + + + G+ D N L R Sbjct: 55 DRVFYDLNKSGLRDDAKDTLQKQADWLAKYPQVNVEVAGNCDDR---GTEEYNIALGQRR 111 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332 A +A L+ GV+ RIS IS + R + + NR Sbjct: 112 ANAARDYLVAKGVASSRISTIS-YGKDRPTALGDDEDAWAQNR 153 >gi|256820385|ref|YP_003141664.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256581968|gb|ACU93103.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271] Length = 397 Score = 73.1 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 74/227 (32%), Gaps = 11/227 (4%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 +K + S N ++ +Q + N +H K++ + K +L + + Sbjct: 168 SKQQLTYDTKSANGQQGFQGNHFTLTAGLNIALGKHGKHADWAAASKKDELEEVAQRVAN 227 Query: 167 INKEENYFLPPLS--KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + ++ + K+ ++ ++ V + + Sbjct: 228 LENNVADLKSEVANKQNKMNDANGNNVPDEIESYLNDNYKAKDKVGENGEVKDDDVAADL 287 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 I FD +SS P + + + + + + I+I G+ D + Sbjct: 288 ---IRKGYINAYFDFNSSKPQISSSWAVDFVAKYMKSNPNAHININGYADEL---GGTQY 341 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 N LS RA + +L+K+G+ RI+ G + + Sbjct: 342 NQTLSQKRADAVKDLLVKAGIDGSRITA-EGKGVDASVDKNSS-RAR 386 >gi|225350146|gb|ACN87983.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 73.1 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 77/268 (28%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ EN P + + + + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDARVDV---AGPAENNGCPWPDTDNDGVLDKDDKC 227 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 ++ + + + + F+ + + PE+ L Sbjct: 228 SNVP-------------GLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|219681692|ref|YP_002468078.1| outer membrane protein A precursor [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682247|ref|YP_002468631.1| outer membrane protein A precursor [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471385|ref|ZP_05635384.1| outer membrane protein A precursor [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219621980|gb|ACL30136.1| outer membrane protein A precursor [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624535|gb|ACL30690.1| outer membrane protein A precursor [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086068|gb|ADP66150.1| outer membrane protein A precursor [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086640|gb|ADP66721.1| outer membrane protein A precursor [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087225|gb|ADP67305.1| outer membrane protein A precursor [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087744|gb|ADP67823.1| outer membrane protein A precursor [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 349 Score = 73.1 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 20/120 (16%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293 F +S+ P + L K+ + + + GH D N +LS DRAY Sbjct: 233 FPFNSTELKPSSYDKLNKLDDDIKDMQLKNVSIVLLGHADKI---GSDEYNQKLSEDRAY 289 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN------------SANRRIDILVEDR 341 S L G S D+I + G + + +RR++I V Sbjct: 290 SIKNYLASRGFSRDKI-TVKGMGKLYPL-TNQVCRDVVNKPLLISCLAPDRRVEIEVLSD 347 >gi|90408384|ref|ZP_01216546.1| OmpA family protein [Psychromonas sp. CNPT3] gi|90310477|gb|EAS38600.1| OmpA family protein [Psychromonas sp. CNPT3] Length = 201 Score = 73.1 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 19/177 (10%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 S+ + P K + + + S L + +N R ++ Sbjct: 17 SLQAIDMAKEPTEQKFDLSDEEADGVILARDNCPGSVLGADINNNGCGLTTAVKVRAQLM 76 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDN 284 I+ F+ S + + ++ + + + + +I GHT A N Sbjct: 77 IN---------FETDSYVVSSNYLPKIEHLSQFMHEYPQTTVTIEGHTSHR---GTASYN 124 Query: 285 WRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI--DI 336 LS RA ++L+ + V RI+ I G+ +L + D ++ NRRI +I Sbjct: 125 KILSQQRADMIKKILIEEYQVEASRITAI-GYGFDQLLLEGDDEYVHARNRRIVAEI 180 >gi|15616938|ref|NP_240151.1| outer membrane protein A precursor [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11386970|sp|P57414|OMPA_BUCAI RecName: Full=OmpA-like protein; Flags: Precursor gi|10039003|dbj|BAB13037.1| outer membrane protein A precursor [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 349 Score = 73.1 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 20/120 (16%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293 F +S+ P + L K+ + + + GH D N +LS DRAY Sbjct: 233 FPFNSTELKPSSYDKLNKLDDDIKDMQLKNVSIVLLGHADKI---GSDEYNQKLSEDRAY 289 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN------------SANRRIDILVEDR 341 S L G S D+I + G + + +RR++I V Sbjct: 290 SIKNYLASRGFSRDKI-TVKGMGKLYPL-TNQVCRDVVNKPLLISCLAPDRRVEIEVLSD 347 >gi|325474507|gb|EGC77694.1| OmpA family protein [Treponema denticola F0402] Length = 1345 Score = 73.1 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 91/311 (29%), Gaps = 25/311 (8%) Query: 52 WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSS-----------QNKIDL 100 W I +D ++ K ++ + L+ N + I Sbjct: 1033 WNIQISDVESGKVFAEWTSKKDGKLLKKLVWDGKSGNSKAPDGRYMATMYIEYKKGDIVT 1092 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR-DSEKGKDLCK 159 + E ++ KIG + + K + + K + E + Sbjct: 1093 AFTEDFILSTQAPKIGVSTRPKYFSPDNDGTDDDLYISLKADSKAGIENWKFEITEPEEN 1152 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 L +E + + L+ + + D + T + + + Sbjct: 1153 GGKLFWKTGGKEKITNELIWDGRSLSGETVQSATDYPFTFTVTDKVGLTSVYRGYIPVDI 1212 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGH 271 + + +F +++ ++ K +L + + GH Sbjct: 1213 LVIRDGDKLKIAVPSIIFRANAADFEGLDKAIVDKNKSILKRIAVILNKFPEYQVQVEGH 1272 Query: 272 TDASPFRNIARDN--WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PM 327 + + LS RA + Q L+K GV R+S I G + + +D Sbjct: 1273 ANTTTGTEKEETTALLPLSKQRAEAVRQFLIKEGVRSSRLSSI-GMGSSKPVASLNDRDN 1331 Query: 328 NSANRRIDILV 338 NRR++ ++ Sbjct: 1332 WWKNRRVEFIL 1342 >gi|197123809|ref|YP_002135760.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] gi|196173658|gb|ACG74631.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] Length = 242 Score = 73.1 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S PE+ LQK+ + L + ++G+ D A+ N L RA SA Sbjct: 141 FAFDRSNLTPESQQNLQKLADCLKQAPAKRVLVQGNCDER---GTAQYNVALGNRRAESA 197 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 + L GVS + +S + + + S NRR D +E Sbjct: 198 KKYLTDLGVSTS-VDTVS-YGEEKPVCSEATEACWSKNRRDDFQIER 242 >gi|91224536|ref|ZP_01259798.1| putative outer membrane protein [Vibrio alginolyticus 12G01] gi|269968325|ref|ZP_06182346.1| outer membrane protein, putative [Vibrio alginolyticus 40B] gi|91190878|gb|EAS77145.1| putative outer membrane protein [Vibrio alginolyticus 12G01] gi|269827061|gb|EEZ81374.1| outer membrane protein, putative [Vibrio alginolyticus 40B] Length = 204 Score = 73.1 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 6/131 (4%) Query: 216 LFETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274 + G I D +F S P ++++ + L SI H A Sbjct: 62 EVDNDGCGEYIKASDNMQVRILFANDSDEINPVFRRQVRELSDFLKEYP-TTSIELHGYA 120 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANR 332 S + N LS RA + + L+ + R+ +I GF L + ++ NR Sbjct: 121 SKVGGS-KHNQDLSERRARNVREALLSYDIEPSRV-RIVGFGDTHLAQQGTDEVSHALNR 178 Query: 333 RIDILVEDRQG 343 R+ V +G Sbjct: 179 RVTASVVGYKG 189 >gi|30314426|gb|AAP15422.1| outer membrane lipoprotein precursor [Burkholderia ambifaria] gi|30314428|gb|AAP15423.1| outer membrane lipoprotein precursor [Burkholderia ambifaria] gi|30314452|gb|AAP15435.1| outer membrane lipoprotein precursor [Burkholderia ambifaria] Length = 149 Score = 73.1 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 47 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + + NRR D++ Sbjct: 104 RRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRRADLV 146 >gi|282879247|ref|ZP_06287997.1| OmpA family protein [Prevotella buccalis ATCC 35310] gi|281298640|gb|EFA91059.1| OmpA family protein [Prevotella buccalis ATCC 35310] Length = 703 Score = 73.1 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 5/98 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I++ + +D + PE+ L ++ ++L + I + H D ++ N Sbjct: 527 ITVPVLIDNIFYDFDKATLRPESKQALDELVKLLNENGNVTIELSAHCD---YKGSKEYN 583 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 +L+ RA S Q L+ G+++DR+S + G+ + K+ Sbjct: 584 KQLAQRRAESVVQYLIAGGIAKDRLSPV-GYGKEKPKV 620 >gi|319942535|ref|ZP_08016845.1| outer membrane protein A [Sutterella wadsworthensis 3_1_45B] gi|319803938|gb|EFW00856.1| outer membrane protein A [Sutterella wadsworthensis 3_1_45B] Length = 222 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 38/120 (31%), Gaps = 22/120 (18%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLDRAYS 294 +F+ + E VL + +A + + G+ D N +LS RA + Sbjct: 101 LFNFDKATLKDEGRAVLDDLVSRVAGVDLEVILTTGYADRI---GSDAYNLKLSQRRADA 157 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSA-------------NRR--IDIL 337 L++ GV I G + + NRR ++++ Sbjct: 158 VKAYLVQKGVDAALIKS-EGKGEADPVVNCPNPSKAGQVKTFKELVQCLQPNRRAVVEVV 216 >gi|296274015|ref|YP_003656646.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296098189|gb|ADG94139.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299] Length = 256 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 14/183 (7%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 T ++ N + A ++++ + + + Sbjct: 60 DQTQDTIKRDESTNTSKDASNDADSNAQDTAAAADEMSQIAQEVNEQVSTQSEQVQITEG 119 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVISIR--GHTDAS 275 + D ++ MF++ + KI V+ + I G+TD S Sbjct: 120 NNEFTL-----DIPSSIMFNEGEYNLSNKSAKNFISKIARVIRTMPQTFDIEIIGYTDRS 174 Query: 276 PFRNIA--RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 F++ RD W LS RA S + L+K+ + ++ +S ++ +R K + NRR Sbjct: 175 NFKSDTIPRDGWDLSALRAISVVKELIKNRIDPAQLK-VSAYSSYRPKSEN---AVENRR 230 Query: 334 IDI 336 ++I Sbjct: 231 VEI 233 >gi|322379707|ref|ZP_08054020.1| peptidoglycan-associated lipoprotein precursor [Helicobacter suis HS5] gi|321147856|gb|EFX42443.1| peptidoglycan-associated lipoprotein precursor [Helicobacter suis HS5] Length = 181 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 6/118 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 I F + V+ + + + S + + G+TD N Sbjct: 67 QIESGTVVGQVYFSFDKYDIRADMESVIDQAAQKIKESQMKVLLEGNTDEF---GSGEYN 123 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVED 340 + L+ RA S Q L+ G+++D I ++ + + + NRR+DI V + Sbjct: 124 FALANKRALSVKQALIIKGIAQDTI-RVVSLGETKPSCQEKNKTCYRKNRRVDIKVVE 180 >gi|238897463|ref|YP_002923140.1| outer membrane protein 3a (II*;G;d) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|188474314|gb|ACD49741.1| outer membrane protein A [Candidatus Hamiltonella defensa] gi|229465218|gb|ACQ66992.1| outer membrane protein 3a (II*;G;d) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 365 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 45/153 (29%), Gaps = 17/153 (11%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---A 260 + + + V + ++ +F + E L K+ L Sbjct: 203 QEKPPEILPEPVTKIDLEPVAQTQHFELKSDVLFGFNQWTLKKEGGEELNKLYSKLANVN 262 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 +++ G +D + N LS RA S L+ G+S D I G Sbjct: 263 PQEGSVTVLGFSDRI---GGDKYNQLLSQKRAQSVADYLISKGISSDTPFVIKGLGKSNP 319 Query: 321 KIASDPMNSA------N-----RRIDILVEDRQ 342 S N RR+D+ V + Sbjct: 320 VTGSKCNEVKKRLELVNCLAPDRRVDVKVTGNK 352 >gi|153951751|ref|YP_001398162.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. doylei 269.97] gi|152939197|gb|ABS43938.1| putative chemotaxis protein MotB [Campylobacter jejuni subsp. doylei 269.97] Length = 317 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 99/321 (30%), Gaps = 52/321 (16%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+++ + + + Sbjct: 12 W-IAYADLMAGLLFVFILLI--------------------------GAIVVKYVLTQSDL 44 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS-NSQQSEHCKNSLTRDS 151 + + ++ +L+ K L N L+ + Q + ++ Sbjct: 45 KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANIINYK 104 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---ISSTLSGLVA 208 + KDL + D + L +E + ++ ++ + I LS + Sbjct: 105 QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQ 164 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEV 258 + + + I +S +FDK S + L+K Sbjct: 165 SKLDNNITIDEKTGSISLS-----AEVLFDKDSYVLKNGVKASLRKILSEYFDAILEDPK 219 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFA 316 + + E I I GHTD+ N LS RAY + S+ ++ SG + Sbjct: 220 IFSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKSDKFQKLLMASGRS 276 Query: 317 HHRLKIASDPMN-SANRRIDI 336 + + +RRI+I Sbjct: 277 FSDPVFVNGVEDKDKSRRIEI 297 >gi|330975634|gb|EGH75700.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 250 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 40/126 (31%), Gaps = 8/126 (6%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + L GV + I + + F SS L + L Sbjct: 87 DKQEAALRESMANTGVEVQRQGDQIKLIM---PGNITFATDSSAIASSFYSPLNNLASSL 143 Query: 260 AH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I I G+TD++ + N LS RA S L GV + + + G Sbjct: 144 KQFNQNNIEIVGYTDST---GSRQHNMDLSQQRAQSVATYLTSQGVDQAHL-SVRGAGPD 199 Query: 319 RLKIAS 324 + ++ Sbjct: 200 QPIASN 205 >gi|315609087|ref|ZP_07884056.1| OmpA family protein [Prevotella buccae ATCC 33574] gi|315249157|gb|EFU29177.1| OmpA family protein [Prevotella buccae ATCC 33574] Length = 755 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 5/97 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I+ + ++ + PE+ L ++ ++L + I + H D ++ N Sbjct: 580 ITAPVLIDNIFYEFDKANLTPESTKALDELVKLLNENPNVTIELSAHCD---YKGSMEYN 636 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 RLS RA + L+ G++ DR++ + G+ R K Sbjct: 637 KRLSQRRAEAVVAYLVGHGIARDRLTPV-GYGKERPK 672 >gi|260779363|ref|ZP_05888255.1| sodium-type flagellar protein MotY precursor [Vibrio coralliilyticus ATCC BAA-450] gi|260605527|gb|EEX31822.1| sodium-type flagellar protein MotY precursor [Vibrio coralliilyticus ATCC BAA-450] Length = 293 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 8/159 (5%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + + R Q + +SS L + + + I+ +D+SS Sbjct: 140 QEWQSRDQRIEVSLSSVLFQHSYNAFSDCIANLLPYSFEDIAFTILH----YDRSSVQLN 195 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L +I E + H+ ++ + T S + + LS RA G+ Sbjct: 196 KASQKRLAQIAEYIRHNQDIDLVLVSTYTSNEESKSAS-QNLSEQRAEVLRDYFKSLGLP 254 Query: 306 EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 EDRI ++ G+ R + NRR+ I + Q Sbjct: 255 EDRI-QVQGYGRRRPVADNASPLGKDKNRRVVISLGRTQ 292 >gi|260778540|ref|ZP_05887432.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604704|gb|EEX30999.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450] Length = 203 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 7/113 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 +F+ SS P + ++++ + L I ++G+ N LS RA Sbjct: 81 HILFENDSSDIQPVFLTQIREMADFLKIYPSTSIELQGYASKVGNHG---HNMALSQRRA 137 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 L+ +GVS RI +I GF L D ++ NR++ V +G Sbjct: 138 EEVESALINNGVSHTRI-RIVGFGDTNLADTGDDEITHAKNRKVVATVVGHKG 189 >gi|261341331|ref|ZP_05969189.1| peptidoglycan-associated lipoprotein [Enterobacter cancerogenus ATCC 35316] gi|296103328|ref|YP_003613474.1| peptidoglycan-associated outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|288316636|gb|EFC55574.1| peptidoglycan-associated lipoprotein [Enterobacter cancerogenus ATCC 35316] gi|295057787|gb|ADF62525.1| peptidoglycan-associated outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 173 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 68 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 172 >gi|307262353|ref|ZP_07543999.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306867901|gb|EFM99731.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 334 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 7/92 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 + +F S P L + + + S I + G+TD N +LS Sbjct: 241 SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRI---GKEASNLKLSQ 297 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 RA + ++ G ++ + G+ Sbjct: 298 RRAETVANYIVSKGAPAANVTAV-GYGEANPV 328 >gi|320194769|gb|EFW69398.1| Integral membrane protein YfiB [Escherichia coli WV_060327] Length = 127 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 19 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 76 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITAP 127 >gi|312965520|ref|ZP_07779752.1| ompA family protein [Escherichia coli 2362-75] gi|312289940|gb|EFR17828.1| ompA family protein [Escherichia coli 2362-75] Length = 127 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + GHTD N LSL R Sbjct: 19 DAILFAKNDYKLLPESQQQIQTMAAKLASIGLTHARMDGHTDNY---GEDSYNEVLSLKR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 76 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127 >gi|167762473|ref|ZP_02434600.1| hypothetical protein BACSTE_00828 [Bacteroides stercoris ATCC 43183] gi|167699579|gb|EDS16158.1| hypothetical protein BACSTE_00828 [Bacteroides stercoris ATCC 43183] Length = 224 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 58/148 (39%), Gaps = 9/148 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + V+ V + ++ + +F +SS + L+ + Sbjct: 75 KMDKKAAEAAKIEGAQVEMVKDANNLDAVKVTF---DSGILFTFNSSTLSNDAKASLRDL 131 Query: 256 GEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++L +T I+I GHTD N ++S +RAY+ L GVS + ++ G Sbjct: 132 AKILKEDTTTDIAIIGHTDKV---GTYEANMKVSKNRAYAVENYLQDCGVSPSQFKQVEG 188 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ S NRR+ I + + Sbjct: 189 VGYNE--YDESLSASENRRVVIFMYASE 214 >gi|255602974|ref|XP_002537961.1| Outer membrane protein A precursor, putative [Ricinus communis] gi|223514409|gb|EEF24422.1| Outer membrane protein A precursor, putative [Ricinus communis] Length = 295 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 7/88 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F S+ P L I VL +++ + + I G+ D + N +LS RA Sbjct: 213 LFSFDSAKLNPN-QPKLDDIANVLNNNSSIDNVVITGYADRL---GSEKYNQKLSERRAN 268 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLK 321 S + L+ GVS +R++ + G Sbjct: 269 SVKEYLVSKGVSANRLNAV-GKGESNPV 295 >gi|50235103|gb|AAT70754.1| OmpA [Riemerella anatipestifer] gi|50235105|gb|AAT70755.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 73/268 (27%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T + ++ + + Sbjct: 171 KVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + ++ F + S PE+ L Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQSEYAKDATGALQGIFFHFNKSSIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GVS ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|71907527|ref|YP_285114.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71847148|gb|AAZ46644.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 198 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 8/166 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTP 235 +R ++ D+ + + T + I Q T Sbjct: 36 QAEVVTAAGKQRLEKSGDMTQTSGEAKPPSAVKTADPAYIASTFAEVLAIEPPPPQVFTL 95 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 MF+ ++ ++ + I V I GHTDA+ + N LSL+RA Sbjct: 96 MFESGTTNLTTASLDQIPNIVAASQKRPAVSVRISGHTDAT---GSDKVNDALSLERAMQ 152 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + +L + G+ R+ ++ I + NRR+ ++V Sbjct: 153 VWNLLQQKGIPA-RLMSVTSHGKGNPAIPTPDGVAEPRNRRVVVIV 197 >gi|320183086|gb|EFW57948.1| Integral membrane protein YfiB [Shigella flexneri CDC 796-83] gi|323167728|gb|EFZ53423.1| ompA family protein [Shigella sonnei 53G] gi|332092191|gb|EGI97269.1| ompA family protein [Shigella boydii 3594-74] gi|332765583|gb|EGJ95796.1| ompA family protein [Shigella flexneri 2930-71] gi|333000803|gb|EGK20377.1| ompA family protein [Shigella flexneri K-218] Length = 127 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 19 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 76 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127 >gi|318068285|gb|ADV36930.1| outer membrane protein A [Riemerella anatipestifer] Length = 387 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 77/268 (28%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ EN P + + + + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDV---AGPAENNGCPWPDTDNDGVLDKDDKC 227 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D+ + + + + F+ + + E+ L Sbjct: 228 PDVP-------------GLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|259909069|ref|YP_002649425.1| peptidoglycan-associated outer membrane lipoprotein [Erwinia pyrifoliae Ep1/96] gi|292487662|ref|YP_003530535.1| peptidoglycan-associated lipoprotein [Erwinia amylovora CFBP1430] gi|292898899|ref|YP_003538268.1| peptidoglycan-associated lipoprotein [Erwinia amylovora ATCC 49946] gi|224964691|emb|CAX56208.1| Peptidoglycan-associated lipoprotein Pal, OmpA family of porins [Erwinia pyrifoliae Ep1/96] gi|283479095|emb|CAY75011.1| Peptidoglycan-associated lipoprotein precursor [Erwinia pyrifoliae DSM 12163] gi|291198747|emb|CBJ45856.1| peptidoglycan-associated lipoprotein precursor [Erwinia amylovora ATCC 49946] gi|291553082|emb|CBA20127.1| Peptidoglycan-associated lipoprotein precursor [Erwinia amylovora CFBP1430] gi|310767031|gb|ADP11981.1| peptidoglycan-associated outer membrane lipoprotein [Erwinia sp. Ejp617] gi|312171770|emb|CBX80028.1| Peptidoglycan-associated lipoprotein precursor [Erwinia amylovora ATCC BAA-2158] Length = 172 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 7/138 (5%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L G + G + + + + + + N F + +L L + Sbjct: 38 LDGSANSGMNSGNMSSDEQARLQMQELQKNNIVYFGLDKYDIQSDFAQMLDAHANFLRSN 97 Query: 263 TEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 ++ GH D N L RA + L GV++D+IS +S + + Sbjct: 98 PSYKVTVEGHADER---GTPEYNIALGERRASAVKMYLQGKGVADDQISIVS-YGKEKPA 153 Query: 322 I--ASDPMNSANRRIDIL 337 + + + NRR ++ Sbjct: 154 VLGHDESAYAKNRRAVLV 171 >gi|89890715|ref|ZP_01202224.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] gi|89516860|gb|EAS19518.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] Length = 368 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 11/78 (14%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---- 323 + HTD+ N LS RA S L+ G++ RI +G+ +RLK Sbjct: 292 VASHTDSR---GSKTSNQALSERRAQSVANYLISKGINNSRIVA-NGYGENRLKNRCADG 347 Query: 324 ---SDPMNSANRRIDILV 338 ++ + ANRR + Sbjct: 348 VSCTEREHKANRRTTFRL 365 >gi|332668116|ref|YP_004450904.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332336930|gb|AEE54031.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 662 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 11/110 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + +D + L K+ E L + + I + HTD N LS Sbjct: 550 RLENIYYDLDKWDIRADAQPTLDKLAETLKLNPKVRIQLSSHTDCR---GTDVYNESLSQ 606 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRR 333 RA SA L+ G+ R+ G+ + S+ + NRR Sbjct: 607 KRAQSAVDYLISKGIEAQRLEA-RGYGEGVPEATCACARCSEDEHQLNRR 655 >gi|251733505|emb|CAR82502.1| pal [Ensifer adhaerens] Length = 87 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ + L + + LA ++I GH D N L RA S Sbjct: 1 TDSTSVRADAQQTLDRQAQWLAKYPNYAVTIEGHADER---GTREYNLALGARRAASTKD 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322 L+ GV +R+ IS + + Sbjct: 58 YLISRGVPANRLKTIS-YGKEKPVA 81 >gi|254447506|ref|ZP_05060972.1| OmpA family protein [gamma proteobacterium HTCC5015] gi|198262849|gb|EDY87128.1| OmpA family protein [gamma proteobacterium HTCC5015] Length = 1980 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 9/116 (7%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNI----ARDNWRLSL 289 P F+ S+ E +I + + I++ GH D P R DN LSL Sbjct: 472 PRFESFSAELGEEDQQHFDQILSQVDKQRVQRITVIGHADTRPIRARSQSIYADNQALSL 531 Query: 290 DRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 RA A + + G+ D++ + G + +ANRR++I++E Q Sbjct: 532 ARANVAAEYARQRLGLEADKVD-VLGKGDSFPLLKGRSGEDNAANRRVEIVIESLQ 586 >gi|65321877|ref|ZP_00394836.1| COG1360: Flagellar motor protein [Bacillus anthracis str. A2012] Length = 133 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 + +W I Y+D +T+L A F+V++ +++ D K + F T +K Sbjct: 14 HEEHIDETWLIPYSDMLTLLFALFIVLFAMSSIDAAKFKQMAVAFR-SELAGGTGNKEFL 72 Query: 85 DEQNPPERSSQNKIDLSIDE 104 +Q P + + L ++ Sbjct: 73 SDQKPNDEKELSASSLETEQ 92 >gi|332088113|gb|EGI93238.1| ompA family protein [Shigella boydii 5216-82] Length = 127 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 19 DAILFAKNDYKLLPESQQQIQTMAAQLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 76 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127 >gi|50235069|gb|AAT70737.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T +L+ +++ Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPELQGCPDTDGDGVPDEDDDCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C D+ + Sbjct: 171 EVAGPVETNGCPWPDPAKDGVLDKHHACVDVAGPAENTGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|323188374|gb|EFZ73665.1| ompA family protein [Escherichia coli RN587/1] Length = 127 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 19 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEVLSLKR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 76 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127 >gi|262166026|ref|ZP_06033763.1| outer membrane protein [Vibrio mimicus VM223] gi|262025742|gb|EEY44410.1| outer membrane protein [Vibrio mimicus VM223] Length = 278 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 37/272 (13%), Positives = 85/272 (31%), Gaps = 25/272 (9%) Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 G + PE+ + ++ D +G + + + E Sbjct: 15 GTAGCTSYPEKGRGGIAEAYMNGEFAPVMPDEPLGPEHG--------LRFDWQLSKLHLE 66 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 + + + + + L + + ++ KR +L+ ++S Sbjct: 67 SLIREGAKWCFPAAVVQALEKQNRIARQLDGGLLLDAANDLLIQRKRLNQLEQQLDYVTS 126 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + N V + + + F +S+ P+ + L + L Sbjct: 127 QTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQ---FAINSTEINPKYMGNLAIAADKLKD 183 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + +S+ GH D+ + N +L++ RA + L G++ +RI+ S Sbjct: 184 RQDLTLSVTGHADS---SGNSEFNEKLAMGRAEQVKRYLTIFGLAPERITTHS-LGESLP 239 Query: 321 KIASDPMNSA--NRRIDILV-------EDRQG 343 + NRR+ I + +QG Sbjct: 240 LYVGETPGVKLTNRRVSIEIITADSPTLSKQG 271 >gi|30314450|gb|AAP15434.1| outer membrane lipoprotein precursor [Burkholderia cepacia] Length = 150 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 48 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + NRR D++ Sbjct: 105 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147 >gi|295395656|ref|ZP_06805848.1| peptidoglycan-associated lipoprotein OprL [Brevibacterium mcbrellneri ATCC 49030] gi|294971472|gb|EFG47355.1| peptidoglycan-associated lipoprotein OprL [Brevibacterium mcbrellneri ATCC 49030] Length = 602 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 39/117 (33%), Gaps = 21/117 (17%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDR 291 +F+ S + + + E L S + + + GHTD N LS R Sbjct: 293 DVLFEFDSDKLNKDAQKTIDSVAEELKKSAKGQKVVVEGHTDDE---GDEGYNQGLSERR 349 Query: 292 AYSAYQV----LMKSGVSEDRISKISGFAHHRLKIASDPM--------NSANRRIDI 336 A S + L +G+ + GF + + + + NRR+ Sbjct: 350 AESVKKAVEPKLSGAGIQ----LETKGFGETKPIVPNRDGKGNPIKKNQAKNRRVSF 402 >gi|90421593|ref|YP_529963.1| OmpA/MotB [Rhodopseudomonas palustris BisB18] gi|90103607|gb|ABD85644.1| OmpA/MotB [Rhodopseudomonas palustris BisB18] Length = 617 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285 +T F+ S P+ LQ I + L S EV I GHTDA DN Sbjct: 485 DLDTITFELGSWEIPPDQAAKLQAIADGLNKSIARNPREVFLIEGHTDAV---GNDTDNL 541 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA +A Q+L + GV + ++ G+ LK+ + NRR+ + Sbjct: 542 SLSDRRAEAAAQLLTQQFGVPAENLTS-QGYGEQYLKVPTQAPERQNRRVTV 592 >gi|50235091|gb|AAT70748.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + K + + F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPKVPGLPKYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|258543662|ref|YP_003189095.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO 3283-01] gi|256634740|dbj|BAI00716.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO 3283-01] gi|256637796|dbj|BAI03765.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO 3283-03] gi|256640850|dbj|BAI06812.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO 3283-07] gi|256643905|dbj|BAI09860.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO 3283-22] gi|256646960|dbj|BAI12908.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO 3283-26] gi|256650013|dbj|BAI15954.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO 3283-32] gi|256653003|dbj|BAI18937.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656057|dbj|BAI21984.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO 3283-12] Length = 160 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + +D + S + LQK + LA + + + G+ D N L R Sbjct: 55 DRVFYDLNKSGLRDDAKDTLQKQADWLAKYPQVNVEVAGNCDDR---GTEEYNIALGQRR 111 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332 A +A L+ GV+ RIS IS + R + + NR Sbjct: 112 ANAARDYLVAKGVASSRISTIS-YGKDRPTALGDDEDAWAQNR 153 >gi|189402632|ref|ZP_02783681.2| OmpA family protein [Escherichia coli O157:H7 str. EC4401] gi|189406165|ref|ZP_02826729.2| OmpA family protein [Escherichia coli O157:H7 str. EC508] gi|189354554|gb|EDU72973.1| OmpA family protein [Escherichia coli O157:H7 str. EC4401] gi|189376183|gb|EDU94599.1| OmpA family protein [Escherichia coli O157:H7 str. EC508] Length = 127 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 19 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 76 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITPP 127 >gi|50235071|gb|AAT70738.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENTGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEAPGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|189405293|ref|ZP_02814514.2| OmpA family protein [Escherichia coli O157:H7 str. EC869] gi|191169055|ref|ZP_03030818.1| OmpA family protein [Escherichia coli B7A] gi|193064020|ref|ZP_03045105.1| OmpA family protein [Escherichia coli E22] gi|194439333|ref|ZP_03071411.1| OmpA family protein [Escherichia coli 101-1] gi|256019576|ref|ZP_05433441.1| putative outer membrane lipoprotein [Shigella sp. D9] gi|301026824|ref|ZP_07190226.1| OmpA family protein [Escherichia coli MS 196-1] gi|332280700|ref|ZP_08393113.1| outer membrane lipoprotein [Shigella sp. D9] gi|43146|emb|CAA25961.1| unnamed protein product [Escherichia coli] gi|189370879|gb|EDU89295.1| OmpA family protein [Escherichia coli O157:H7 str. EC869] gi|190900896|gb|EDV60682.1| OmpA family protein [Escherichia coli B7A] gi|192929255|gb|EDV82864.1| OmpA family protein [Escherichia coli E22] gi|194421695|gb|EDX37704.1| OmpA family protein [Escherichia coli 101-1] gi|299879570|gb|EFI87781.1| OmpA family protein [Escherichia coli MS 196-1] gi|315615303|gb|EFU95938.1| ompA family protein [Escherichia coli 3431] gi|323159124|gb|EFZ45117.1| ompA family protein [Escherichia coli E128010] gi|323184520|gb|EFZ69894.1| ompA family protein [Escherichia coli 1357] gi|332103052|gb|EGJ06398.1| outer membrane lipoprotein [Shigella sp. D9] gi|332344474|gb|AEE57808.1| outer membrane protein OmpA [Escherichia coli UMNK88] Length = 127 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 19 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 76 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127 >gi|261253570|ref|ZP_05946143.1| sodium-type flagellar protein MotY precursor [Vibrio orientalis CIP 102891] gi|260936961|gb|EEX92950.1| sodium-type flagellar protein MotY precursor [Vibrio orientalis CIP 102891] Length = 293 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294 +D++S ++ L +I E + H+ ++ + +TDA ++ + LS RA Sbjct: 187 YDRTSVELNKQSQKRLAQIAEYIKHNQDIDLVLVSTYTDAEDSKSAS---QNLSERRAEV 243 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G+ EDRI ++ G+ R + NRR+ I + Q Sbjct: 244 LQNYFKSLGLPEDRI-RVQGYGKRRPIDDNASPIGKDRNRRVVISLGRTQ 292 >gi|90411166|ref|ZP_01219179.1| putative outer membrane protein [Photobacterium profundum 3TCK] gi|90328012|gb|EAS44333.1| putative outer membrane protein [Photobacterium profundum 3TCK] Length = 196 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 9/167 (5%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 E ++ + +D K AD ++ + + +F Sbjct: 21 EDPPIAEQSQDQRDFDKDGVINARDKCADTPHSAIVDNDGCPTSINREEENDVRVLFAND 80 Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ + +Q++ + L E I ++G+ + N LS RA + L Sbjct: 81 STAIPEAFLSEIQRMADFLDVYPEAYIELKGYASPV---GNSEYNIGLSKRRATKVREQL 137 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVEDRQG 343 + GV+ RI I GF A + + N RR+ V +G Sbjct: 138 IAEGVAPQRIKTI-GFGDAEPIAA-ESSEATNTLSRRVVARVIGSKG 182 >gi|300775077|ref|ZP_07084940.1| outer membrane protein A [Chryseobacterium gleum ATCC 35910] gi|300506892|gb|EFK38027.1| outer membrane protein A [Chryseobacterium gleum ATCC 35910] Length = 503 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 75/270 (27%), Gaps = 23/270 (8%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N AS I +R +D T + + ++ Sbjct: 210 KSTVANFWQASASILFRFGNRDRDKDGILDKDDLCPDTPGLPEFQGCPDTDGDGVPDKDD 269 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 ++ ++ C T D + D + + P + Sbjct: 270 QCPDVAGPVENNGCPWPDT-DGDGVIDKDDACPTVAGPAENNGCPWPDTDGDG------- 321 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + + + + + + + FD + + PE+ Sbjct: 322 --------ILDKDDACPTVPGLPEYNGCPKPKEVTATDVEKNLKSVYFDFNKATIKPESK 373 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L E++ + G TD + N +LS +RA S L GV + + Sbjct: 374 GALDTAAEIIKKDGGRFLLVGETDK---KGSDAYNLKLSKERAASVVAALDARGVDTNVL 430 Query: 310 SKISGFAHHRLKI---ASDPMNSANRRIDI 336 I G K+ ASD ++R++ + Sbjct: 431 KSI-GIGEQNAKVAESASDAERQSDRKVTV 459 >gi|153877559|ref|ZP_02004282.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS] gi|152065977|gb|EDN65718.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS] Length = 188 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 F S +L++ L + E + + GH D N L Sbjct: 82 SERIIYFGYDMSNIKSNARTILEQHAAYLTQNPEIYVRLEGHADER---GSREYNLALGE 138 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337 RA +A L+ GV E +++ +S + R ++ NRR++++ Sbjct: 139 RRAETAKNTLIMLGVFETQVTTLS-YGEERPQTFEHNEQSWQQNRRVELV 187 >gi|56460187|ref|YP_155468.1| peptidoglycan-associated lipoprotein [Idiomarina loihiensis L2TR] gi|56179197|gb|AAV81919.1| Peptidoglycan-associated lipoprotein [Idiomarina loihiensis L2TR] Length = 178 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 48/167 (28%), Gaps = 7/167 (4%) Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + L+ + V + + + + Sbjct: 15 PMATLAACSSNQETDSGMGAGQEINQQAEQDSGVEVGAADRAQRMEEERQQKMEALRKEH 74 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 F S E +L + L + V + GHTD N L RA Sbjct: 75 IVYFAFDKSNVQSEYTDLLSAHADYLVKNPSVKVVIEGHTDER---GTPEYNIALGERRA 131 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 + L GV + + S +S + + + +++ + NRR ++ Sbjct: 132 KAVESYLHNLGVQDSQTSTVS-YGEEKPMVNGSNERAYAKNRRAVLV 177 >gi|320177022|gb|EFW52043.1| Integral membrane protein YfiB [Shigella dysenteriae CDC 74-1112] Length = 127 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 19 DAILFAKNDYKLLPESQQQIQTMAAKLASTGITHARMDGHTDNY---GEDSYNEGLSLKR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 76 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127 >gi|315498692|ref|YP_004087496.1| peptidoglycan-associated lipoprotein [Asticcacaulis excentricus CB 48] gi|315416704|gb|ADU13345.1| peptidoglycan-associated lipoprotein [Asticcacaulis excentricus CB 48] Length = 184 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 10/125 (8%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269 + ++ ++++ D+ F+ S + +L K L + I Sbjct: 56 LSPTGPVPGSQQDFVVNVGDR---VFFELDQSSLREDAKALLDKQAAWLVRYPAVKVRIE 112 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 G+ D N+ L RA S Q L GV RIS IS + + Sbjct: 113 GNADER---GTREYNFALGARRAESVSQYLTSKGVVPSRISTIS-YGKENPIATGTDEEA 168 Query: 330 --ANR 332 NR Sbjct: 169 WSQNR 173 >gi|149192088|ref|ZP_01870312.1| peptidoglycan-associated lipoprotein [Vibrio shilonii AK1] gi|148834074|gb|EDL51087.1| peptidoglycan-associated lipoprotein [Vibrio shilonii AK1] Length = 174 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSL 289 + T F +S + +L L + ++I GH D N L Sbjct: 68 ENQTIYFAFDNSTIAGDYEDMLAAHAAYLSKDPSLKVTIEGHADER---GTPEYNIALGE 124 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 RA + + + GV D+IS +S + + + + + NRR ++ Sbjct: 125 RRAQAVAKYIQALGVQADQISIVS-YGEEKPLVLGQSEDAYAKNRRAVLV 173 >gi|89899949|ref|YP_522420.1| OmpA/MotB [Rhodoferax ferrireducens T118] gi|89344686|gb|ABD68889.1| OmpA/MotB [Rhodoferax ferrireducens T118] Length = 181 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 13/122 (10%) Query: 224 ILISIIDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 I IS +D N+P+ F + + +++ + LA + + + G+ D Sbjct: 59 IAISPLDDANSPLAKRSVFFGFDNFQIRSSDLPLIEAHAKYLAANKSAKVRLEGNADER- 117 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRI 334 N L RA + + L GV + + +S F + A ++ + NRR+ Sbjct: 118 --GGREYNLALGQKRAEAVRRSLRLLGVPDSSLEAVS-FGMEKPVDAGHNEDAWAKNRRV 174 Query: 335 DI 336 D+ Sbjct: 175 DL 176 >gi|71280451|ref|YP_270642.1| ompA family protein [Colwellia psychrerythraea 34H] gi|71146191|gb|AAZ26664.1| ompA family protein [Colwellia psychrerythraea 34H] Length = 278 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 78/232 (33%), Gaps = 8/232 (3%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 + +T +++ N G + + + N Sbjct: 35 VNATENTLPPEKIHQEATNEENIGFGTGAVIGAIVAGPLGAIVAGIGGVFVAKYINVNDQ 94 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 LS + ++++ + + + + L L A + V ET + D Sbjct: 95 NDELSTALVNEQRKQRSNEQIQSQYQAKLQRLEASYQQQLVALETQQHDSGQLQADNLLM 154 Query: 235 PM-FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292 + F SS P + + ++L S E+ + G+TD+ N LS R Sbjct: 155 SLQFSTGSSDIAPHYQEQVAALAQILNSSPEMKIDLSGYTDSI---GEQSLNQTLSQARV 211 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 S +LM GV E +I+ + F +A++ + +RR+ + + Sbjct: 212 ESVRTLLMAQGVEEQQIATFA-FGEESPVVANNESEVSFYDRRVVLKLHTPP 262 >gi|24216275|ref|NP_713756.1| flagellar motor protein MotB [Leptospira interrogans serovar Lai str. 56601] gi|24197541|gb|AAN50774.1| flagellar motor protein MotB [Leptospira interrogans serovar Lai str. 56601] Length = 275 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + L+K + V G++IS++ F+ S+I + L Sbjct: 87 KALSKSKQLATELFKPEVEAGKVKITEDERGLIISLVSADY---FNPGSAILTDSIKIAL 143 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN---------IARDNWRLSLDRAYSAYQVLMK-S 302 +K ++ + + + GH DA+ +NW L+ RA ++ ++ Sbjct: 144 RKASSLIKNLNRFVRVEGHCDANAVNPGVAPGKEERAYINNWDLAGARAINSTDYIINVE 203 Query: 303 GVSEDRISKISGFAHHRLK----IASDPMNSANRRIDILVEDRQ 342 + +S F R + + NRRIDI++ + Sbjct: 204 KLDPSWFQAVS-FGAFRPLVVEYAGTPEAKAYNRRIDIVIMTEK 246 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 33/90 (36%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K + N+ + + Y D +T+L+ FF++++ T+ + I F Sbjct: 3 KSKCPECIQNIPEYMLTYGDMVTLLLCFFIMLYTTGKTNAIEMQIILSAFKTTTGFFDGG 62 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 + ++ + + ++K+ Sbjct: 63 QTLSKGRLEEMGMNIESLPSQTTGKALSKS 92 >gi|134294843|ref|YP_001118578.1| OmpA domain-containing protein [Burkholderia vietnamiensis G4] gi|134138000|gb|ABO53743.1| OmpA domain protein [Burkholderia vietnamiensis G4] Length = 170 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E +LQ+ + L + + I+G+TD + N L RA + Sbjct: 68 FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 124 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + NRR D++ Sbjct: 125 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 167 >gi|83647670|ref|YP_436105.1| outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] gi|83635713|gb|ABC31680.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] Length = 346 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLS 288 +R F S+ + L K+ + V + GHTD++ N RLS Sbjct: 218 ERTAVFFKLDESVLTDQDKRELDKVVLYVKADPSVTAIFVDGHTDST---GRRIYNRRLS 274 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 DRA + LM GV+ ++I+ + + + NRR + +E Sbjct: 275 KDRAEAVTAYLMDKGVASEKITT-RYHGERYPVVQNAGPKNLARNRRATVRLER 327 >gi|318068271|gb|ADV36923.1| outer membrane protein A [Riemerella anatipestifer] Length = 387 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|313206517|ref|YP_004045694.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868] gi|312445833|gb|ADQ82188.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868] gi|325336035|gb|ADZ12309.1| outer membrane protein A [Riemerella anatipestifer RA-GD] Length = 488 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 212 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 271 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 272 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 315 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 316 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 375 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 376 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 432 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 433 -KGVGSAEATVPASASNEERMKDRKVVV 459 >gi|225024677|ref|ZP_03713869.1| hypothetical protein EIKCOROL_01559 [Eikenella corrodens ATCC 23834] gi|224942566|gb|EEG23775.1| hypothetical protein EIKCOROL_01559 [Eikenella corrodens ATCC 23834] Length = 230 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 8/117 (6%) Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNI 280 + ++ + +F PE L ++ + L+ + + + + G+TD F Sbjct: 86 PQVREELVSLSSNFLFGFDKFNLRPEARTTLDELAQRLSGSNVQSVRVEGNTD---FMGS 142 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSAN--RRI 334 N RLS RA + + L+ GV ++IS + G + K+ N RR+ Sbjct: 143 DAYNQRLSERRANTVSEYLVGRGVPAEKISAV-GLGESQAKMTEQCQQEVRNLGRRV 198 >gi|167374417|gb|ABZ79138.1| outer membrane protein [Riemerella anatipestifer] Length = 338 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 88 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 147 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 148 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 191 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 192 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 251 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 252 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 308 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 309 -KGVGSAEATVPASASNEERMKDRKVVV 335 >gi|146310897|ref|YP_001175971.1| peptidoglycan-associated outer membrane lipoprotein [Enterobacter sp. 638] gi|145317773|gb|ABP59920.1| OmpA domain protein [Enterobacter sp. 638] Length = 173 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 68 NNIVYFDLDKFDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 124 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 125 RANAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYSKNRRAVLV 172 >gi|67005885|gb|AAY62590.1| OmpA [Riemerella anatipestifer] Length = 390 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|30314444|gb|AAP15431.1| outer membrane lipoprotein precursor [Burkholderia pyrrocinia] Length = 149 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 47 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 103 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + NRR D++ Sbjct: 104 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 146 >gi|7339731|gb|AAF60955.1|AF104937_1 outer membrane protein A precursor [Riemerella anatipestifer DSM 15868] gi|50235063|gb|AAT70734.1| OmpA [Riemerella anatipestifer] gi|50235101|gb|AAT70753.1| OmpA [Riemerella anatipestifer] gi|126046403|gb|ABN73091.1| OmpA [Riemerella anatipestifer] gi|126046426|gb|ABN73095.1| OmpA [Riemerella anatipestifer] gi|225350118|gb|ACN87969.1| OmpA [Riemerella anatipestifer] gi|225350120|gb|ACN87970.1| OmpA [Riemerella anatipestifer] gi|225350122|gb|ACN87971.1| OmpA [Riemerella anatipestifer] gi|225350124|gb|ACN87972.1| OmpA [Riemerella anatipestifer] gi|225350126|gb|ACN87973.1| OmpA [Riemerella anatipestifer] gi|257359510|gb|ACV53155.1| OmpA [Riemerella anatipestifer] gi|296280735|gb|ADH04665.1| OmpA [Riemerella anatipestifer] gi|318068273|gb|ADV36924.1| outer membrane protein A [Riemerella anatipestifer] gi|318068281|gb|ADV36928.1| outer membrane protein A [Riemerella anatipestifer] Length = 387 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|22126930|ref|NP_670353.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis KIM 10] gi|45440865|ref|NP_992404.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis biovar Microtus str. 91001] gi|108806600|ref|YP_650516.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis Antiqua] gi|108813033|ref|YP_648800.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis Nepal516] gi|145599836|ref|YP_001163912.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis Pestoides F] gi|149366875|ref|ZP_01888909.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis CA88-4125] gi|162418864|ref|YP_001605923.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis Angola] gi|165924580|ref|ZP_02220412.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Orientalis str. F1991016] gi|165938361|ref|ZP_02226919.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Orientalis str. IP275] gi|166011606|ref|ZP_02232504.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Antiqua str. E1979001] gi|166211496|ref|ZP_02237531.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400048|ref|ZP_02305566.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419890|ref|ZP_02311643.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424166|ref|ZP_02315919.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218928293|ref|YP_002346168.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis CO92] gi|229841062|ref|ZP_04461221.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843166|ref|ZP_04463312.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis biovar Orientalis str. India 195] gi|229894003|ref|ZP_04509189.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis Pestoides A] gi|229903473|ref|ZP_04518586.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis Nepal516] gi|270487253|ref|ZP_06204327.1| peptidoglycan-associated lipoprotein [Yersinia pestis KIM D27] gi|294503130|ref|YP_003567192.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Z176003] gi|21959969|gb|AAM86604.1|AE013906_8 peptidoglycan-associated lipoprotein [Yersinia pestis KIM 10] gi|45435723|gb|AAS61281.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis biovar Microtus str. 91001] gi|108776681|gb|ABG19200.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Nepal516] gi|108778513|gb|ABG12571.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Antiqua] gi|115346904|emb|CAL19791.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis CO92] gi|145211532|gb|ABP40939.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Pestoides F] gi|149291249|gb|EDM41324.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis CA88-4125] gi|162351679|gb|ABX85627.1| peptidoglycan-associated lipoprotein [Yersinia pestis Angola] gi|165913739|gb|EDR32358.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Orientalis str. IP275] gi|165923640|gb|EDR40772.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989554|gb|EDR41855.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207267|gb|EDR51747.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Antiqua str. B42003004] gi|166962631|gb|EDR58652.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050756|gb|EDR62164.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057015|gb|EDR66778.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679243|gb|EEO75346.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis Nepal516] gi|229689513|gb|EEO81574.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis biovar Orientalis str. India 195] gi|229697428|gb|EEO87475.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703888|gb|EEO90901.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis Pestoides A] gi|262361166|gb|ACY57887.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis D106004] gi|262365277|gb|ACY61834.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis D182038] gi|270335757|gb|EFA46534.1| peptidoglycan-associated lipoprotein [Yersinia pestis KIM D27] gi|294353589|gb|ADE63930.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Z176003] gi|320014265|gb|ADV97836.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 168 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPF 277 + + + + + N F + +L L + + + + GH D Sbjct: 50 EEQARLQMQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSDKVVVEGHADER-- 107 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA + L GVS D+IS +S + + + + NRR Sbjct: 108 -GTPEYNIALGERRASAVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAFAKNRRAV 165 Query: 336 IL 337 ++ Sbjct: 166 LV 167 >gi|311694109|gb|ADP96982.1| OmpA/MotB domain protein [marine bacterium HP15] Length = 305 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 9/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288 QR+ F S+ +L I + + E I + GH+D+ DN LS Sbjct: 182 QRSRVPFASGSTQLSDADRQLLDNIVAYVNADSTVERIFVDGHSDSI---GSRIDNRALS 238 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 DRA L SG+ E+ + + ++ P + NRR +I ++ Sbjct: 239 EDRANVVADYLKASGIDEN-MITVRAHGDQYPV-SNRPAD--NRRTNIRLQR 286 >gi|291276673|ref|YP_003516445.1| peptidoglycan associated lipoprotein [Helicobacter mustelae 12198] gi|290963867|emb|CBG39703.1| peptidoglycan associated lipoprotein (omp18) [Helicobacter mustelae 12198] Length = 169 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 22/166 (13%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 A K ++ + + + ++ D + G + + Sbjct: 18 AKKEVAIDEAPKVQQEEEPVQENVAKAPEPKKKDILQDGTVV---------------GSV 62 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 F P V+ E + + ++ + G+TD N+ LS RA + Sbjct: 63 YFAYDQYNIPPSMSDVIDSSVEKINENPDMNVVVEGNTDEF---GSDEYNFALSNKRAMA 119 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L+ G+S+++I I + NRR DI + Sbjct: 120 VQSALITRGISKNKI-SILSLGKTKPVCTEKREECYQKNRRGDIRL 164 >gi|281421188|ref|ZP_06252187.1| OmpA family protein [Prevotella copri DSM 18205] gi|281404723|gb|EFB35403.1| OmpA family protein [Prevotella copri DSM 18205] Length = 660 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 5/120 (4%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 L D+ + + I+ + +D + + L ++ +L + Sbjct: 492 EELRVDSAKESKEYVLQFPLASITAPVLIDNIFYDFDKATLTEASTTALDQLVTLLKENP 551 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I + H D ++ + N LS RA S L+K G+ ++R++ + G+ + K Sbjct: 552 HVTIELSAHCD---YKGNSEYNKHLSQRRAQSVVDYLIKHGIEKERLTPV-GYGKEKPKN 607 >gi|163802824|ref|ZP_02196713.1| sodium-type flagellar protein MotY [Vibrio sp. AND4] gi|159173364|gb|EDP58187.1| sodium-type flagellar protein MotY [Vibrio sp. AND4] Length = 293 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 +++ + +TD++ ++ + LS RA S G+SEDRI ++ G+ R Sbjct: 212 NQDIDLVLVSTYTDSTDGKSTS---QNLSERRAESLRTYFESLGLSEDRI-QVQGYGKRR 267 Query: 320 LKIASDP--MNSANRRIDILVEDRQ 342 + NRR+ I + Q Sbjct: 268 PIADNGSPIGKDKNRRVVISLGRTQ 292 >gi|30314418|gb|AAP15418.1| outer membrane lipoprotein precursor [Burkholderia cenocepacia] gi|30314424|gb|AAP15421.1| outer membrane lipoprotein precursor [Burkholderia cenocepacia] gi|30314448|gb|AAP15433.1| outer membrane lipoprotein precursor [Burkholderia cenocepacia] Length = 150 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 48 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + NRR D++ Sbjct: 105 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147 >gi|24212922|ref|NP_710403.1| OmpA family lipoprotein [Leptospira interrogans serovar Lai str. 56601] gi|24193591|gb|AAN47421.1| OmpA family lipoprotein [Leptospira interrogans serovar Lai str. 56601] Length = 195 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 53/174 (30%), Gaps = 19/174 (10%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + +++ + + +AD++ + + D Sbjct: 22 SSAEKKEESAAPEPSTQEQSAAANRNVDVNSPEAIADSLNEKLKDFRYP--------DGL 73 Query: 233 NTPMFDKSSSIPLP-ETIVVLQKIGEVLAH------STEVISIRGHTDA---SPFRNIAR 282 P F + P + + V+ + + I GHTDA + Sbjct: 74 TRPGFSYKKADVTPGDFSEWSKTNAPVIKEGLRKLPDSYALEITGHTDAIGPEQAEGAKK 133 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 N S RA + Q L+K G+ +RI G D ++ NRR+ Sbjct: 134 GNIFYSELRANAVKQALIKQGIPANRIVT-KGAGSSEPVSGLDAKDAKNRRVTF 186 >gi|114563969|ref|YP_751483.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114335262|gb|ABI72644.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400] Length = 215 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 8/110 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 FD S+ L L ++ + + +V I + GHTD N LSL R Sbjct: 107 QPVYFDFDKSVVLLTQRPTLVRVQQYIEQHPQVAIRLEGHTDNI---GSDAVNRSLSLKR 163 Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A + +L+ + I +I G ++ + NRR++ ++ Sbjct: 164 AATIKDLLVNEYQFQPTSI-EIVGMSNKNPVADNATIEGRQRNRRVEFII 212 >gi|308048254|ref|YP_003911820.1| hypothetical protein Fbal_0532 [Ferrimonas balearica DSM 9799] gi|307630444|gb|ADN74746.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799] Length = 3058 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 7/138 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 D + + T ++ +F S+ VVLQ + E LA Sbjct: 2914 QDACPDTPMTHAVDGRGCTLWRTEAMELELVLLFANDSATIPATYDVVLQNLSEQLAPLA 2973 Query: 264 EVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + + GH A +R N LS RA + + L + GV I+ ++ + Sbjct: 2974 DYQVVIEGHASA---PASSRYNLSLSERRAQAVGEALNQRGVESANITYVA-RGEEMPAV 3029 Query: 323 ASDPMNS--ANRRIDILV 338 A + ++ NRR ++V Sbjct: 3030 AGNTEHAYGQNRRAVVMV 3047 >gi|33151318|ref|NP_872671.1| major outer membrane protein [Haemophilus ducreyi 35000HP] gi|1872470|gb|AAB49273.1| major outer membrane protein [Haemophilus ducreyi] gi|33147538|gb|AAP95060.1| major outer membrane protein [Haemophilus ducreyi 35000HP] Length = 403 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + + E VL + + T I + G+TD N +LS Sbjct: 280 SDVLFDFAKADLKQEAAQVLDATNTEIVNLGLATPAIQVNGYTDRI---GSGDVNLKLSQ 336 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + L+ G + I+ + G+ + + +RR+++ + Sbjct: 337 RRAETVANYLVAKGQNPVSINAV-GYGEANPITGNTCDAVKGRKQLIACLAPDRRVEVQI 395 Query: 339 EDRQ 342 + + Sbjct: 396 QGTK 399 >gi|37525408|ref|NP_928752.1| peptidoglycan-associated outer membrane lipoprotein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784836|emb|CAE13749.1| peptidoglycan-associated lipoprotein precursor [Photorhabdus luminescens subsp. laumondii TTO1] Length = 166 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 33/106 (31%), Gaps = 7/106 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 N F + +L L + + GH D N L Sbjct: 60 NNNIVYFGFDKYDINSDFTQLLDAHAAFLRSNPSYKVVVEGHADER---GTPEYNIALGE 116 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 RA + L GVS ++IS +S + + + + NRR Sbjct: 117 RRANAVKMYLQGKGVSGEQISIVS-YGKEKPAVLGHDEAAYAKNRR 161 >gi|271963004|ref|YP_003337200.1| OmpA/MotB domain-containing protein [Streptosporangium roseum DSM 43021] gi|270506179|gb|ACZ84457.1| OmpA/MotB domain protein [Streptosporangium roseum DSM 43021] Length = 193 Score = 72.7 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 12/118 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + +F ++ + L+ + + + V+ I GHTD N RLSL Sbjct: 79 SDVLFALDRAVLTAKAAARLRGVAGRVKTESAGGVVKIVGHTDDQ---GTDAYNDRLSLR 135 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRRIDILVEDR 341 RA + + L + + +G + K+ + + + NRR++I+ + Sbjct: 136 RAQAVQEGLRALLSGQSVTFEATGLGERQPKVPNVVDGRPVEENRARNRRVEIVFTAK 193 >gi|222111846|ref|YP_002554110.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY] gi|221731290|gb|ACM34110.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY] Length = 233 Score = 72.7 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 59/205 (28%), Gaps = 19/205 (9%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + SL + + + + +P ++ ++ A L A+ Sbjct: 33 SRQSLAATPTHLQPADAAPLTQLQPHVTHGGLVPRETETRLQAAAGPATLLRAAEVPPQR 92 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L V + T ID +FD + + L K E+L Sbjct: 93 LEQT----HALLVELQAQPTPEQAISIDLPADVLFDFDKAELRADAARSLDKAAELLKSY 148 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 + I + GHTD + N LS RA + L R G + Sbjct: 149 PQAPIDVVGHTD---GKGGDTYNDALSQRRAAAVAAALQSR---TGRPIATRGMGKRQPV 202 Query: 322 IASDP--------MNSANRRIDILV 338 + NRR+ I++ Sbjct: 203 APNTTPDGRDDPDGRQRNRRVQIVI 227 >gi|329755864|gb|AEC04329.1| outer membrane protein A [Pasteurella multocida] Length = 351 Score = 72.7 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 5/119 (4%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ + F + P VL I +A Sbjct: 208 VTAGLSYRFGQTVYVPEVVNKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 267 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 268 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGN 322 >gi|82703826|ref|YP_413392.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196] gi|82411891|gb|ABB76000.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196] Length = 175 Score = 72.7 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 50/159 (31%), Gaps = 8/159 (5%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 ++D + + + SI+ +R+ FD Sbjct: 17 ASQTKQPGDADMEDRDRSRDAAAAQREGMQAEDYTSPTLNPLTDPNSILSKRS-IYFDFD 75 Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S + E ++ + L + ++G+TD N L RA + + Sbjct: 76 SYVVKDEFRSLVAAHAKYLREHPNARVLLQGNTDER---GSREYNLALGQRRADAVKYAM 132 Query: 300 MKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 SG E +I +S + + + NRR+DI Sbjct: 133 TLSGAQEGQIEAVS-LGEEKPHAMGHDEAAWAENRRVDI 170 >gi|296313331|ref|ZP_06863272.1| OmpA family protein [Neisseria polysaccharea ATCC 43768] gi|296840145|gb|EFH24083.1| OmpA family protein [Neisseria polysaccharea ATCC 43768] Length = 231 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHT 272 V + + +F + E L+ + + L + + + + GHT Sbjct: 71 PVAVVEQAPQYVDETVSLSAKTLFGFDKDVLRAEAQDNLKVLAQRLGQTNVQSVRVEGHT 130 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 D F + N LS RA L+ +GV + S + G + Sbjct: 131 D---FMGSEKYNQTLSERRANVVANYLVSNGVPASKTSAV-GLGESQ 173 >gi|269963139|ref|ZP_06177474.1| peptidoglycan-associated lipoprotein [Vibrio harveyi 1DA3] gi|269832103|gb|EEZ86227.1| peptidoglycan-associated lipoprotein [Vibrio harveyi 1DA3] Length = 173 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + +L L+ + ++I GH D N L RA + Sbjct: 73 FAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADER---GTPEYNIALGERRAEAV 129 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L GV D+IS +S + + + + + NRR ++ Sbjct: 130 SNYLQALGVQADQISIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 172 >gi|213964189|ref|ZP_03392425.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno] gi|213953156|gb|EEB64502.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno] Length = 399 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 29/227 (12%), Positives = 74/227 (32%), Gaps = 8/227 (3%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 +K + S N +K +Q + N + K++ ++ + + Sbjct: 168 SKQQLTYDTKSANGQKGFQGNHFTLTAGLNIAIGKQGKHADWAGADMREQEEDVAQRIAA 227 Query: 167 INKEENYFLPPLSKEK--ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + ++ ++ + + ++ ++ + + + Sbjct: 228 LESNVADLKGEVANKQNRMNDANGNRIPDEIESYLNDNYQAKAGNAVANDSDVASGDVA- 286 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 I + FD +SS P + + +G+ + + I++ G+ D Sbjct: 287 ADLIRKGYISAYFDFNSSEPQVSSSWSIDFVGKYMKENPNAHITVNGYADEL---GGTNY 343 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 N LS RA + +L+K+G+ +RI+ G + P Sbjct: 344 NTTLSQKRADAVKNLLVKAGIDANRITA-QGKGVDNSVDKNSPKARQ 389 >gi|330888144|gb|EGH20805.1| ompA family protein [Pseudomonas syringae pv. mori str. 301020] Length = 71 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 N +LS DRA + VLM GV E RI + G+ A+ + NRR++I+ D Sbjct: 5 NLKLSKDRAQAVADVLMDLGVDEKRIH-VEGYGQQFPVNANASERGRAQNRRVEIVFSDE 63 Query: 342 QG 343 +G Sbjct: 64 KG 65 >gi|226330927|ref|ZP_03806445.1| hypothetical protein PROPEN_04850 [Proteus penneri ATCC 35198] gi|225201722|gb|EEG84076.1| hypothetical protein PROPEN_04850 [Proteus penneri ATCC 35198] Length = 175 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 7/112 (6%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 + + Q+N F + +L L + I++ GH D Sbjct: 63 QLEQLKQQNIVYFGFDKYDISSDYANLLDAHAAFLRANPSVRITVEGHADER---GTPEY 119 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 N L RA + L GVS +++S +S + + + + NRR Sbjct: 120 NIALGERRANAVKMYLQGKGVSAEQLSIVS-YGKEKPAVLGHDEAAYAKNRR 170 >gi|254463781|ref|ZP_05077192.1| OmpA domain protein [Rhodobacterales bacterium Y4I] gi|206684689|gb|EDZ45171.1| OmpA domain protein [Rhodobacterales bacterium Y4I] Length = 310 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 8/133 (6%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGH 271 + V + + +F+ S+ L ++ E LA + E + GH Sbjct: 182 RPVRPVELAKVLDVRGHAVLADLVFESGSTRLREGRYDSLVQLAEYLAANPEYRLLLVGH 241 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA 330 TD N +S RA S + L++ G E +I ++G ++ Sbjct: 242 TDTV---GSQEQNAGISERRAQSVKERLIEAYGAEESQIG-VAGAGFLAPIASNLTPEGR 297 Query: 331 --NRRIDILVEDR 341 NRR++ ++ Sbjct: 298 EANRRVEAVLLAD 310 >gi|187924070|ref|YP_001895712.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] gi|187715264|gb|ACD16488.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 204 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292 +FD ++ PE+ +QK+ VLA + GHTD N RLS+ RA Sbjct: 101 FFLFDSAT-ELAPESAATVQKLKTVLATWPAPQLVVVGHTD---LAGSQEFNDRLSMQRA 156 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 + L+K G+ RI + + + + NRR I ++ Sbjct: 157 QTVAAFLIKQGIPAQRIETAA-RGKREPLVPTADGVPHRMNRRAVITIQ 204 >gi|254437176|ref|ZP_05050670.1| OmpA family protein [Octadecabacter antarcticus 307] gi|198252622|gb|EDY76936.1| OmpA family protein [Octadecabacter antarcticus 307] Length = 189 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 32/104 (30%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +F L + I GHTD+ N LS RA Sbjct: 91 LFANDEDRIANSDKQRLMAFFQ--QADAFGFLIYGHTDS---NASDEYNIDLSNRRASMV 145 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 V +G R+ I GF R + + NRR+++ Sbjct: 146 AGVAQDAG---TRVVDIRGFGERRPAATNATQDGRAQNRRVEVY 186 >gi|320182481|gb|EFW57375.1| Integral membrane protein YfiB [Shigella boydii ATCC 9905] Length = 127 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + L + + GHTD N LSL R Sbjct: 19 DAILFAKNDYKLLPESQQQIQTMAAKLTSTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 A G G ++ + NRR+ +++ Sbjct: 76 ANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP 127 >gi|296534564|ref|ZP_06896978.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957] gi|296265104|gb|EFH11315.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957] Length = 97 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 6/74 (8%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + GH D + N RLS RA + L++ GV+ I + F R + + Sbjct: 28 VAGHADR---AGSPQYNQRLSQRRADAVAAELVRLGVARSAI-SVQAFGESRPLVPTADG 83 Query: 328 --NSANRRIDILVE 339 NRR++I++ Sbjct: 84 VREPQNRRVEIVLR 97 >gi|296104273|ref|YP_003614419.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058732|gb|ADF63470.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 161 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 8/110 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +T +FDK+ + PE+ ++ + LA + + + GHTD N LSL R Sbjct: 53 DTILFDKNDARLRPESEAQIRTMASRLAATGLKHARMDGHTDNY---GEESYNEALSLKR 109 Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A + V K + + ++ G ++ + NRR+ +++ Sbjct: 110 ANAVADVWAKGANIPRSNLTT-QGLGKKYPVSSNSTAQGRAENRRVAVVI 158 >gi|261378312|ref|ZP_05982885.1| OmpA family protein [Neisseria cinerea ATCC 14685] gi|269145408|gb|EEZ71826.1| OmpA family protein [Neisseria cinerea ATCC 14685] Length = 257 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 5/121 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + D + + + +F + E L + + L Sbjct: 57 AEQGRVECGDAAPQAPTVIEQAPQYVDETVSLSAKTLFGFDKDVLRVEAQENLNVLAQRL 116 Query: 260 -AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + + + GHTD F + N LS RA L+ GV +IS G Sbjct: 117 GQTNVQAVRVEGHTD---FMGAEKYNQELSERRANVVANYLVGRGVPAAKISAA-GLGES 172 Query: 319 R 319 + Sbjct: 173 Q 173 >gi|193885364|pdb|3CYP|B Chain B, The Crystal Structure Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256). gi|193885365|pdb|3CYP|C Chain C, The Crystal Structure Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256). gi|193885366|pdb|3CYP|D Chain D, The Crystal Structure Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256). gi|193885367|pdb|3CYP|E Chain E, The Crystal Structure Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256). gi|193885368|pdb|3CYQ|B Chain B, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885369|pdb|3CYQ|C Chain C, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885370|pdb|3CYQ|D Chain D, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885371|pdb|3CYQ|E Chain E, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885372|pdb|3CYQ|F Chain F, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885373|pdb|3CYQ|G Chain G, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885374|pdb|3CYQ|H Chain H, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885375|pdb|3CYQ|I Chain I, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885376|pdb|3CYQ|A Chain A, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885377|pdb|3CYQ|J Chain J, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885378|pdb|3CYQ|K Chain K, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885379|pdb|3CYQ|L Chain L, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885380|pdb|3CYQ|M Chain M, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885381|pdb|3CYQ|N Chain N, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885382|pdb|3CYQ|O Chain O, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|193885383|pdb|3CYQ|P Chain P, The Crystal Structure Of The Complex Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) With N-Acetylmuramic Acid gi|302148709|pdb|3IMP|B Chain B, New Crystal Form Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) gi|302148710|pdb|3IMP|C Chain C, New Crystal Form Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) gi|302148711|pdb|3IMP|D Chain D, New Crystal Form Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) gi|302148712|pdb|3IMP|E Chain E, New Crystal Form Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) gi|302148713|pdb|3IMP|A Chain A, New Crystal Form Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) gi|302148714|pdb|3IMP|F Chain F, New Crystal Form Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) gi|302148715|pdb|3IMP|G Chain G, New Crystal Form Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) gi|302148716|pdb|3IMP|H Chain H, New Crystal Form Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) gi|302148717|pdb|3IMP|I Chain I, New Crystal Form Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) gi|302148718|pdb|3IMP|J Chain J, New Crystal Form Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) gi|302148719|pdb|3IMP|K Chain K, New Crystal Form Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) gi|302148720|pdb|3IMP|L Chain L, New Crystal Form Of The C-Terminal Domain Of Helicobacter Pylori Motb (Residues 125-256) Length = 138 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 241 SSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASP-FRNIARDNWRLSLDRAYSAYQ 297 S + ++ +++I +++ + I++RG TD +P + + ++ L+ +RAY + Sbjct: 12 SDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMK 71 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 VL++ GV+ +++ S + +D N R++I Sbjct: 72 VLIQYGVNPNQL-SFSSYGSTNPIAPNDSLENRMKNNRVEIF 112 >gi|251733531|emb|CAR82515.1| pal [Ensifer adhaerens] gi|251733533|emb|CAR82516.1| pal [Ensifer adhaerens] gi|251733535|emb|CAR82517.1| pal [Ensifer adhaerens] Length = 87 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ + L + + LA I+I GH D N L RA S Sbjct: 1 TDSTSIRADAQQTLARQAQWLAKYPNYAITIEGHADER---GTREYNLALGARRAASTRD 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322 L+ GV +R+ IS + + Sbjct: 58 YLISQGVPANRMKTIS-YGKEKPVA 81 >gi|103485733|ref|YP_615294.1| OmpA/MotB [Sphingopyxis alaskensis RB2256] gi|98975810|gb|ABF51961.1| OmpA/MotB [Sphingopyxis alaskensis RB2256] Length = 170 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 11/113 (9%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290 +F + S E ++ I L + GHTD++ + N LS Sbjct: 58 PERLLFPTNESAVPAEQQERMRAIAMRLVSVGITTARVEGHTDST---GSSAYNLTLSRA 114 Query: 291 RAYSAYQVLMKSGV--SEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 RA + + G+ + D+I G +D NRR+ ++V Sbjct: 115 RAEAVAAPMRAGGMTFTADQIV---GRGETLPLSGNDTAEGRQDNRRVVVIVT 164 >gi|304392317|ref|ZP_07374258.1| OmpA/MotB [Ahrensia sp. R2A130] gi|303295421|gb|EFL89780.1| OmpA/MotB [Ahrensia sp. R2A130] Length = 567 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 70/196 (35%), Gaps = 11/196 (5%) Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 D D + + F P +S + + + + I + Sbjct: 365 PNGDEVVLIDNQDIEAAPQRRVIVLDPFTPQISDDLYVVEQDRADSDAYRTAIEAEPVEE 424 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-- 264 + + R + ID N F+ S+ P + L+++G L + Sbjct: 425 AERAYSLREVRDNQRLRAKVRRID-LNAINFNTGSASVTPSQVDKLEELGIALERHIKAN 483 Query: 265 ---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRL 320 V + GHTDA N LS RA + ++L+++ V + I G+ L Sbjct: 484 PRAVFLMEGHTDAV---GSDVSNLTLSDRRAETVARILIENFAVPAENIVT-QGYGESDL 539 Query: 321 KIASDPMNSANRRIDI 336 K+ ++ N+ NRR+ + Sbjct: 540 KVRTEAANADNRRVTV 555 >gi|171321509|ref|ZP_02910450.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5] gi|171093217|gb|EDT38424.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5] Length = 169 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 67 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + + NRR D++ Sbjct: 124 RRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRRADLV 166 >gi|241666858|ref|YP_002984942.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862315|gb|ACS59980.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 189 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGI 224 + P + ++ DLA + + + + + Sbjct: 18 PGHPFAQELSGPQVVRTLDRLQGGAPAIDLALLMEEAAASAGKGLAGLPDWQKLSKLSQL 77 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIA 281 ++ I F+ S P++ + I + L H + GHT ++ A Sbjct: 78 IVEID-------FENDSIAIEPKSYRTVGMIADALHHPNLRRYKFLVVGHTSST---GDA 127 Query: 282 RDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + N LS RA + + L ++ DR+ I G S+P + NRR+ ++ Sbjct: 128 KHNLDLSQKRANAITEALSTTFSIAPDRLFAI-GVGEEWPGDPSNPQAADNRRVQLV 183 >gi|42527533|ref|NP_972631.1| OmpA family protein [Treponema denticola ATCC 35405] gi|41818118|gb|AAS12542.1| OmpA family protein [Treponema denticola ATCC 35405] Length = 1338 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 91/311 (29%), Gaps = 25/311 (8%) Query: 52 WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSS-----------QNKIDL 100 W I +D ++ K ++ + L+ N + I Sbjct: 1026 WNIQISDVESGKVFAEWTSKKDGKLLKKLVWDGKSGNSKAPDGRYMATMYIEYKKGDIVT 1085 Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR-DSEKGKDLCK 159 + E ++ KIG + + K + + K + E + Sbjct: 1086 AFTEDFILSTQAPKIGVSTKPKYFSPDNDGTDDDLYISLKADSKAGIENWKFEITEPEEN 1145 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 L +E + + L+ + + D + T + + + Sbjct: 1146 GGKLFWKTGGKEKITNELIWDGRSLSGETVQSATDYPFTFTVTDKVGLTSVYRGYIPVDI 1205 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--------TEVISIRGH 271 + + +F +++ ++ K +L + + GH Sbjct: 1206 LVIRDGDKLKIAVPSIIFRANAADFEGLDKAIVDKNKSILKRIAVILNKFPEYQVQVEGH 1265 Query: 272 TDASPFRNIARDN--WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PM 327 + + LS RA + Q L+K G+ R+S I G + + +D Sbjct: 1266 ANTTTGTEKEETTALLPLSKQRAEAVRQFLIKEGLKSSRLSSI-GMGSSKPVASLNDRDN 1324 Query: 328 NSANRRIDILV 338 NRR++ ++ Sbjct: 1325 WWKNRRVEFIL 1335 >gi|258646396|ref|ZP_05733865.1| OmpA family protein [Dialister invisus DSM 15470] gi|260403798|gb|EEW97345.1| OmpA family protein [Dialister invisus DSM 15470] Length = 357 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 36/142 (25%), Gaps = 11/142 (7%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVL 259 S L V + D + F S P + L + Sbjct: 219 SALDNKGNKKEADTVTITPAEEETAVPENDYYFISIHFGNDSDTPRADQTANLDAFVKAA 278 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF--AH 317 + + G TD+ N L++ R + GV + G Sbjct: 279 KETGHTFKLVGRTDS---NGSKEYNDDLAIRRVKKVADYAVAHGVDLSHLV---GMYKGE 332 Query: 318 HRLKIASDPMNSA--NRRIDIL 337 +D NRR+DI Sbjct: 333 EAPVDTNDTEAGRANNRRVDIF 354 >gi|153833067|ref|ZP_01985734.1| outer membrane protein [Vibrio harveyi HY01] gi|148870635|gb|EDL69542.1| outer membrane protein [Vibrio harveyi HY01] Length = 204 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 54/173 (31%), Gaps = 7/173 (4%) Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + ++ LQD L + + S Sbjct: 21 AEDEYEYTETPKAEQIADLQDDDNDGVINARDLCPGTPATSEIDNDGCGEYIKSSEKMEV 80 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 +F S P ++++ E L I ++G+ + N LS RA Sbjct: 81 RVLFANDSDEIDPVFRRQIRELSEFLKEYPSTSIELQGYASKV---GGSEHNLDLSKRRA 137 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343 + L+ G+ DR+ +I GF L + ++ NRR+ V +G Sbjct: 138 NNVRAALLGYGIESDRV-RIVGFGDTHLAEQGTDEVSHALNRRVTASVIGYKG 189 >gi|30314430|gb|AAP15424.1| outer membrane lipoprotein precursor [Burkholderia cepacia] Length = 150 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + ++Q+ + L + + I+G+TD + N L RA + Sbjct: 48 FDFDSYSVKDDYQSLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + NRR D++ Sbjct: 105 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147 >gi|16127724|ref|NP_422288.1| OmpA family protein [Caulobacter crescentus CB15] gi|221236545|ref|YP_002518982.1| cell surface antigen Sca2 [Caulobacter crescentus NA1000] gi|13425220|gb|AAK25456.1| OmpA family protein [Caulobacter crescentus CB15] gi|220965718|gb|ACL97074.1| cell surface antigen Sca2 [Caulobacter crescentus NA1000] Length = 449 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWR 286 + F S+ PE V+ + + I + GHTD + N + Sbjct: 338 FEAREFIVYFPFDQSVLTPEAQSVVTEAAKYSNDGKATKIIVVGHTDT---SGSPKYNAK 394 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 LS RA + L+ GVS++ + + +A+ NRR I + Sbjct: 395 LSERRARAVADALVSQGVSQN-VLGVDWKGESAPAVATGDGVKEPLNRRSTISI 447 >gi|323143404|ref|ZP_08078089.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066] gi|322416809|gb|EFY07458.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066] Length = 329 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 16/117 (13%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRA 292 +F S E + + + + + ++G+TD N LS RA Sbjct: 211 LFPFDGSSLCEEGVKAVNDVVDSVNAKNIQNAAYDVKGYTDRI---GSEAYNQTLSEKRA 267 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---------RRIDILVED 340 + L +GV+ +++ ++G N RR+++ V Sbjct: 268 QAVADQLQAAGVAPEQL-TVTGMGEADPVSTGCEGLRGNKLVDCLAPDRRVELSVTG 323 >gi|163802040|ref|ZP_02195936.1| quinolinate synthetase [Vibrio sp. AND4] gi|159174181|gb|EDP58989.1| quinolinate synthetase [Vibrio sp. AND4] Length = 175 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + +L L+ + ++I GH D N L RA + Sbjct: 75 FAFDNSTIAGDYEEMLAAHASYLSKNPGLNVTIEGHADER---GTPEYNIALGERRAEAV 131 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L GV D++S +S + + + + + NRR ++ Sbjct: 132 SNYLQALGVQADQVSIVS-YGEEKPLLLGQSEDVYAKNRRAVLV 174 >gi|325287507|ref|YP_004263297.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489] gi|324322961|gb|ADY30426.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489] Length = 393 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 70/211 (33%), Gaps = 15/211 (7%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q + + K + + I KE+ ++ K + + + L K Sbjct: 189 QHAVGVVYQFKAEKGLSKKGLEKQAQIEEILKEQQRVADSIAAAKKQEEEARLLAERLKK 248 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + V I+ N F +SS T L I E Sbjct: 249 EQEALRLAEVEKEKAAAEKQRREDLQAKINSFGSIN---FALNSSYLDSRTKKTLNSIAE 305 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 +L + + + +TD+ + N LS R + L+ GVS ++++ + F Sbjct: 306 LLQENPTVTVKLGAYTDSR---GTDKYNLWLSQRRMQRSLDFLVSKGVSSEKVNA-TAFG 361 Query: 317 HHRLKIA-------SDPMNSANRRIDILVED 340 L ++ + NRRI+I V+ Sbjct: 362 EEELLNNCEDGVYCTEQEHKINRRIEITVDK 392 >gi|50235085|gb|AAT70745.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++ Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGGGVPDKDDTCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ Q+ C T D+ P + L Sbjct: 171 EVAGPVQNNGCPWPDTDKDGVLDKDHACVDV---------AAPPENTGCPWPDTDNDGVL 221 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 K + + + + F+ + + E+ L Sbjct: 222 DKDDKC-------PTCPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|50235087|gb|AAT70746.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + K + + F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPKYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|88861313|ref|ZP_01135944.1| outer membrane protein [Pseudoalteromonas tunicata D2] gi|88816692|gb|EAR26516.1| outer membrane protein [Pseudoalteromonas tunicata D2] Length = 178 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 Q FD ++I + +LQ L + V I GH D N L Sbjct: 72 QEQVIYFDFDTAIVSSQYADLLQAHANFLVVNPSVKVLIEGHADER---GTPEYNIALGE 128 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 R + L GVS ++ + + + + ++ + NRR ++ Sbjct: 129 RRGDAVVTYLQSLGVSASQL-SVVSYGEEKPMVKSRNEEAFAKNRRAVLV 177 >gi|118474222|ref|YP_891707.1| chemotaxis protein MotB, putative [Campylobacter fetus subsp. fetus 82-40] gi|118413448|gb|ABK81868.1| chemotaxis protein MotB, putative [Campylobacter fetus subsp. fetus 82-40] Length = 334 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 102/317 (32%), Gaps = 31/317 (9%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+++ I A + N +L + + + + Sbjct: 14 W-ISYADLMAGLLFVFVLL--IGAI-VVKYVLTQADLNALRIDLNKKVEALAFSSDELNK 69 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 + D K+ + + ++ + + + + + E Sbjct: 70 KEKAIKDFIEKLQNAKD----RNLALSEINALFNEKLAELSIQLGDINSTLRVVNEENKE 125 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + + + + K+R++DL +S L + Sbjct: 126 LSSIINLKDEQISDLKIALTQKESEYNSVLADLNSTKERIKDLGGIKLKVISDLK-QKLG 184 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI---------GEVLAHST 263 + + + + ++ +FD +S + L++ + + + Sbjct: 185 NSIRIDANSGSVSL-----PSSILFDTNSFMLKDSARFDLRRTLKAYFDVLLSDEIRPNI 239 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED--RISKISGFAHHRLK 321 + I I GHTD+ N LS RAY + + +E+ + SG + L Sbjct: 240 DRIVIEGHTDSD---GSYLYNLELSQKRAYEVMKFIYSFYKNEELGKYLIASGRSFSDLV 296 Query: 322 IAS--DPMNSANRRIDI 336 + + ++ RRI+I Sbjct: 297 YKNGVEDKEAS-RRIEI 312 >gi|146343730|ref|YP_001208778.1| hypothetical protein BRADO6977 [Bradyrhizobium sp. ORS278] gi|146196536|emb|CAL80563.1| conserved hypothetical protein; putative OmpA-like transmembrane domains [Bradyrhizobium sp. ORS278] Length = 213 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD +S+ +++ +Q +G L + GHTDA N LS RA Sbjct: 103 FDYNSANISQKSMASVQALGRALTSPDLKGSTFVLAGHTDA---AGADAYNQDLSERRAD 159 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 S + L++ G++ + + G+ +LK S P+ NRR+ ++ Sbjct: 160 SIKRYLVEKFGIAGSDLVTV-GYGKSKLKDPSQPLAEVNRRVQVV 203 >gi|163800218|ref|ZP_02194119.1| hypothetical protein 1103602000595_AND4_06044 [Vibrio sp. AND4] gi|159175661|gb|EDP60455.1| hypothetical protein AND4_06044 [Vibrio sp. AND4] Length = 298 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 84/292 (28%), Gaps = 33/292 (11%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 + I + P + + ++ +++ + +D I + + Sbjct: 34 FADVNVSKF-LISECLAPQREIHIAVAEHFDFDESVIREADAASLDAFIRDIQGLSGRIT 92 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 +G T+ K + + +E + + D K Sbjct: 93 IVGHTDFKG-------------SDEYNEKLSMRRAESVKAYLEQQLDLDQYDWEVKHFGE 139 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 P + E A +R + ++ + T Sbjct: 140 SQPLVLGESDQARAENRRAYAMFEEAKKYEEMPFCEPPKPERKIYMAMTPH--------- 190 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD +S PE + L L I + GHTD N +L+ RA Sbjct: 191 ---FDFDNSELKPEELSQLDDFIAKLQGLEGSIMVAGHTDQV---GALSYNEQLAERRAQ 244 Query: 294 SAYQVLMKSGVSEDRIS-KISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 + L K+ + + + ++ F + I N+ NRR I+ ++ + Sbjct: 245 NVVAYL-KTKLDPSQFAWEVKAFGELQPVINEVSPQANALNRRAFIVFKESE 295 >gi|311745705|ref|ZP_07719490.1| putative thrombospondin type 3 repeat:OmpA/MotB [Algoriphagus sp. PR1] gi|311302419|gb|EAZ79498.2| putative thrombospondin type 3 repeat:OmpA/MotB [Algoriphagus sp. PR1] Length = 426 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 66/229 (28%), Gaps = 8/229 (3%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 G+ + E + + + + + ++ + L S ++ Sbjct: 202 TGTLGLQFYLGSAEEHADWYIAADKYATKEELASQINGIKDMLKDSDGDGVPDYLDKEPN 261 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P ++ + L G + N + +I D Sbjct: 262 TPAGARVNSQGTTMDSDGDGTPDHMDECPFLPGPASTNGCPVEEVVEQVDFLQKAINDGY 321 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + S PL + + + + + ++G+ D N +LS R Sbjct: 322 INVYYAFDSDKPLGYSTSAANYVANFMKKNPGVNVEVKGYADEL---GPEDYNMKLSERR 378 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMNSANRRIDILVE 339 A + Y +L+ SGV R+ G+ +S RR V+ Sbjct: 379 AKAVYDLLIASGVDGSRL-SYKGYGEDTSVDKSSADARQMARRASFEVK 426 >gi|294787834|ref|ZP_06753078.1| OmpA family protein [Simonsiella muelleri ATCC 29453] gi|294484127|gb|EFG31810.1| OmpA family protein [Simonsiella muelleri ATCC 29453] Length = 229 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 5/94 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNW 285 +I ++ +F S E + L + L + + + + GHTD F N Sbjct: 82 EVISFQSNFLFGFDKSTLRSEAVAKLNETAAKLRGTEVQSVRVEGHTD---FMGKDTYNQ 138 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 LS RA L GV +IS + G+ + Sbjct: 139 ALSERRANVVANYLANQGVPAGKISAV-GYGESQ 171 >gi|88801593|ref|ZP_01117121.1| OmpA family protein [Polaribacter irgensii 23-P] gi|88782251|gb|EAR13428.1| OmpA family protein [Polaribacter irgensii 23-P] Length = 651 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 18/130 (13%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARD 283 +I + NT FD + E + L KI ++ ++I HTDA + Sbjct: 508 RNELIIKINTIYFDSNKWNIRSEAAIELDKIVSIMTKYPKIIVASASHTDA---KGNRAY 564 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDP----------MNSA 330 N LS RA SA ++ G+S +RI GF L + +D + Sbjct: 565 NKILSQRRAKSAVDYIIYKGISPERIY-GKGFGEDELTNKCVDNDAHSNRVKCSKLQHQE 623 Query: 331 NRRIDILVED 340 NRR LV + Sbjct: 624 NRRTSFLVLN 633 >gi|115350730|ref|YP_772569.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD] gi|115280718|gb|ABI86235.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 169 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 67 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + + NRR D++ Sbjct: 124 RRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRRADLV 166 >gi|114570410|ref|YP_757090.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10] gi|114340872|gb|ABI66152.1| OmpA/MotB domain protein [Maricaulis maris MCS10] Length = 359 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRL 287 D F+ SS + V+ + +++ G TD A N L Sbjct: 248 DDVSFPVYFEWDSSTLTAQARAVIAQASNQRGSCGVTRVTVAGFTDR---SGAASYNVGL 304 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 S RA + L++ GV I + F R +A+ NRR ++++ Sbjct: 305 SERRARVVREELVRLGVPASTI-SMEAFGETRNAVATADGVREPLNRRTEVVI 356 >gi|254443045|ref|ZP_05056521.1| OmpA family protein [Verrucomicrobiae bacterium DG1235] gi|198257353|gb|EDY81661.1| OmpA family protein [Verrucomicrobiae bacterium DG1235] Length = 512 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 11/118 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + F ++ PE + ++++ ++L + + + GHT A A N +LS Sbjct: 397 KLRPISFQSGTAGLSPEGVSSIEEMVDILQNYPDFRILVAGHTSAR---GDAEANRQLSE 453 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK--IASDPMNS-ANR--RIDILVEDR 341 +RA S + L+ + EDR+ + G + +A + + NR R++ Sbjct: 454 ERARSVAKYLVDHYAIDEDRVRAV-GVGGEQPLRRLAGESYRAHQNRLSRVEFSFLRD 510 >gi|312149267|gb|ADQ29338.1| outer membrane protein [Borrelia burgdorferi N40] Length = 381 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I + + + + +K + E GI +S + F +S L + + I ++ Sbjct: 245 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 299 Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316 L I I GHT+ + + LS RA + L+K V +D+I G+ Sbjct: 300 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 355 Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340 + K S P+ + NRR++I + + Sbjct: 356 SQKPKYPKSSPLKAKNRRVEITILN 380 >gi|262173379|ref|ZP_06041056.1| putative sodium-type flagellar protein MotY precursor [Vibrio mimicus MB-451] gi|261890737|gb|EEY36724.1| putative sodium-type flagellar protein MotY precursor [Vibrio mimicus MB-451] Length = 345 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 8/136 (5%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISI 268 V E + D+ F E + L+ + + + + Sbjct: 194 NQSTVQREQLPKMPFLDTRDREVVIYFAFGQRTLSNEQKMRLRALYRYIVEDSRVNKVLV 253 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 G+TD + N +S R+ + L + G++E+++ ++ ++D Sbjct: 254 DGYTDNV---GPSVANLTISRQRSELIAKELNRLGLAEEKV-EVRAHGLRYPVASNDTAA 309 Query: 329 --SANRRIDILVEDRQ 342 + NRR+ + + Sbjct: 310 GQAKNRRVTLRLVRDN 325 >gi|225549312|ref|ZP_03770285.1| outer membrane protein [Borrelia burgdorferi 94a] gi|225370170|gb|EEG99610.1| outer membrane protein [Borrelia burgdorferi 94a] Length = 389 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I + + + + +K + E GI +S + F +S L + + I ++ Sbjct: 253 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 307 Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316 L I I GHT+ + + LS RA + L+K V +D+I G+ Sbjct: 308 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 363 Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340 + K S P+ + NRR++I + + Sbjct: 364 SQKPKYPKSSPLKAKNRRVEITILN 388 >gi|223889267|ref|ZP_03623855.1| outer membrane protein [Borrelia burgdorferi 64b] gi|223885300|gb|EEF56402.1| outer membrane protein [Borrelia burgdorferi 64b] Length = 333 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I + + + + +K + E GI +S + F +S L + + I ++ Sbjct: 197 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 251 Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316 L I I GHT+ + + LS RA + L+K V +D+I G+ Sbjct: 252 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 307 Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340 + K S P+ + NRR++I + + Sbjct: 308 SQKPKYPKSSPLKAKNRRVEITILN 332 >gi|225552144|ref|ZP_03773084.1| outer membrane protein [Borrelia sp. SV1] gi|225371142|gb|EEH00572.1| outer membrane protein [Borrelia sp. SV1] Length = 381 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I + + + + +K + E GI +S + F +S L + + I ++ Sbjct: 245 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 299 Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316 L I I GHT+ + + LS RA + L+K V +D+I G+ Sbjct: 300 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 355 Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340 + K S P+ + NRR++I + + Sbjct: 356 SQKPKYPKSSPLKAKNRRVEITILN 380 >gi|226320927|ref|ZP_03796478.1| outer membrane protein [Borrelia burgdorferi 29805] gi|226233699|gb|EEH32429.1| outer membrane protein [Borrelia burgdorferi 29805] Length = 381 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I + + + + +K + E GI +S + F +S L + + I ++ Sbjct: 245 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 299 Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316 L I I GHT+ + + LS RA + L+K V +D+I G+ Sbjct: 300 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 355 Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340 + K S P+ + NRR++I + + Sbjct: 356 SQKPKYPKSSPLKAKNRRVEITILN 380 >gi|218249525|ref|YP_002374694.1| outer membrane protein [Borrelia burgdorferi ZS7] gi|221217420|ref|ZP_03588891.1| outer membrane protein [Borrelia burgdorferi 72a] gi|224533995|ref|ZP_03674579.1| outer membrane protein [Borrelia burgdorferi CA-11.2a] gi|225549874|ref|ZP_03770836.1| outer membrane protein [Borrelia burgdorferi 118a] gi|226321923|ref|ZP_03797448.1| outer membrane protein [Borrelia burgdorferi Bol26] gi|218164713|gb|ACK74774.1| outer membrane protein [Borrelia burgdorferi ZS7] gi|221192698|gb|EEE18914.1| outer membrane protein [Borrelia burgdorferi 72a] gi|224512831|gb|EEF83198.1| outer membrane protein [Borrelia burgdorferi CA-11.2a] gi|225369565|gb|EEG99016.1| outer membrane protein [Borrelia burgdorferi 118a] gi|226232513|gb|EEH31267.1| outer membrane protein [Borrelia burgdorferi Bol26] Length = 381 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I + + + + +K + E GI +S + F +S L + + I ++ Sbjct: 245 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 299 Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316 L I I GHT+ + + LS RA + L+K V +D+I G+ Sbjct: 300 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 355 Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340 + K S P+ + NRR++I + + Sbjct: 356 SQKPKYPKSSPLKAKNRRVEITILN 380 >gi|15594512|ref|NP_212301.1| outer membrane protein (tpn50) [Borrelia burgdorferi B31] gi|216264209|ref|ZP_03436201.1| outer membrane protein [Borrelia burgdorferi 156a] gi|2688065|gb|AAC66563.1| outer membrane protein (tpn50) [Borrelia burgdorferi B31] gi|215980682|gb|EEC21489.1| outer membrane protein [Borrelia burgdorferi 156a] Length = 389 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I + + + + +K + E GI +S + F +S L + + I ++ Sbjct: 253 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 307 Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316 L I I GHT+ + + LS RA + L+K V +D+I G+ Sbjct: 308 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 363 Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340 + K S P+ + NRR++I + + Sbjct: 364 SQKPKYPKSSPLKAKNRRVEITILN 388 >gi|229525621|ref|ZP_04415026.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae bv. albensis VL426] gi|297578614|ref|ZP_06940542.1| sodium-type flagellar protein MotY [Vibrio cholerae RC385] gi|229339202|gb|EEO04219.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae bv. albensis VL426] gi|297536208|gb|EFH75041.1| sodium-type flagellar protein MotY [Vibrio cholerae RC385] Length = 294 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 91/298 (30%), Gaps = 19/298 (6%) Query: 51 MWIINATDDDTKKAI-EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 ++ I+ A+ +Y ++ + E K Sbjct: 9 LFAISTLSASVASALEVRYVATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKI 68 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 ++D ++ + + + + + ++ +++ Sbjct: 69 NLDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSE 128 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 E P S + + ++ + +SS L + + + IS Sbjct: 129 LEKGRYPTFSYQDWQSRDQRIEVA-----LSSVLFQQPYNEFSDCISKLLPYSFEDISFT 183 Query: 230 DQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWR 286 +D+ S + L +I E + ++ ++ + +TD++ N + Sbjct: 184 ILH----YDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNS---QN 236 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS RA + G+ EDRI ++ G+ R + NRR+ I + Q Sbjct: 237 LSEQRAEVLREYFKSIGLPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293 >gi|50235089|gb|AAT70747.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 34/266 (12%), Positives = 70/266 (26%), Gaps = 24/266 (9%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + K + + F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPKVPGLPKYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRI 334 G AS+ +R++ Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKV 356 >gi|50235093|gb|AAT70749.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 73/268 (27%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPETPGLPEFQGCPDTDGDGVPDKDDNCL 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T + ++ + + Sbjct: 171 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + R+ F + S PE+ L Sbjct: 215 TDNDGVLDKDDKCPSVPGLPEYNGCPKPRSEYAKDATGALQGIFFHFNKSSIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GVS ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVSPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|260432019|ref|ZP_05785990.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415847|gb|EEX09106.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157] Length = 518 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 12/154 (7%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + LA I+S S + + + V + + +S F+ SS P ++ Sbjct: 372 QGDRLANAITSGGSEVGLQELQRMVETLRPLSRLSLSFR-------FEPGSSRPDAQSRS 424 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL---MKSGVSED 307 +Q++ + L S A N R++L RA + + +++ V + Sbjct: 425 NIQQLAQALEAGQYDGRKLVFVGFSDGDGPAESNARIALRRAQTVRNAVLAAVQTSVPDS 484 Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + GF D NRR++I V Sbjct: 485 VGISVEGFGEAMPLACDDTDWGRKANRRVEIWVR 518 >gi|30314438|gb|AAP15428.1| outer membrane lipoprotein precursor [Burkholderia cepacia] gi|30314440|gb|AAP15429.1| outer membrane lipoprotein precursor [Burkholderia stabilis] gi|30314446|gb|AAP15432.1| outer membrane lipoprotein precursor [Burkholderia vietnamiensis] Length = 150 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + ++Q+ + L + + I+G+TD + N L RA + Sbjct: 48 FDFDSYSVKDDYQSLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + NRR D++ Sbjct: 105 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147 >gi|318068283|gb|ADV36929.1| outer membrane protein A [Riemerella anatipestifer] Length = 387 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKVKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + +V+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAADVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|319952777|ref|YP_004164044.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319421437|gb|ADV48546.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 301 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 41/141 (29%), Gaps = 9/141 (6%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS--SIPLPETIVVLQKIGEVLA 260 L + + E + I F+ + I + L Sbjct: 164 LGPVSYAFSNEHEDLEEEMKALYDKIKADPLVLYFNTGEAAITLTVSERQKIAAISKYLD 223 Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 S+ GHTD+ N L +RA A Q L ++G+ +I S Sbjct: 224 KIEGANCSVVGHTDSQ---GNRITNIGLGQERADFAKQYLSENGILASKIIATS-KGPDT 279 Query: 320 LKIASDPMNSA--NRRIDILV 338 +D NRR I + Sbjct: 280 PIATNDTDEGRSQNRRTVITL 300 >gi|167623666|ref|YP_001673960.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167353688|gb|ABZ76301.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4] Length = 245 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 63/179 (35%), Gaps = 20/179 (11%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + + L +E I+ ++ + L +L+ + L + + + G+ + Sbjct: 76 QTQQVMLDEKEQELIVLNQQNQSLVELSDQYEQAQQQLTSLKMAQEQKLTELALGLNVQ- 134 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287 F SS P L I ++ S E + + G+ D N L Sbjct: 135 --------FKTGSSTIEPHFQNQLNDIAYAMSLSPELTLDLTGYADRR---GDGDYNQAL 183 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN----RRIDILVEDRQ 342 S R L++ GV+E R+ + +A N RR+ + +++++ Sbjct: 184 SEQRVAEVKNYLIEQGVAEARLHN-QAYGDSSPLMAEQSFE--NDFFDRRVTLKLQNQE 239 >gi|251733529|emb|CAR82514.1| pal [Ensifer adhaerens] Length = 87 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ + L + + LA I+I GH D N L RA S Sbjct: 1 TDSTSIRADAQQTLARQAQWLAKYPNYAITIEGHADER---GTREYNLALGARRAASTRD 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322 L+ GV +R+ IS + + Sbjct: 58 YLVSQGVPANRMKTIS-YGKEKPVA 81 >gi|251733523|emb|CAR82511.1| pal [Ensifer adhaerens] gi|251733525|emb|CAR82512.1| pal [Ensifer adhaerens] gi|251733527|emb|CAR82513.1| pal [Ensifer adhaerens] Length = 87 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ + L + + LA I+I GH D N L RA S Sbjct: 1 TDSTSIRADAQQTLARQAQWLAKYPNYAITIEGHADER---GTREYNLALGARRAASTRD 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322 L+ GV +R+ IS + + Sbjct: 58 YLISQGVPSNRMKTIS-YGKEKPVA 81 >gi|154148493|ref|YP_001406772.1| putative chemotaxis protein MotB [Campylobacter hominis ATCC BAA-381] gi|153804502|gb|ABS51509.1| putative chemotaxis protein MotB [Campylobacter hominis ATCC BAA-381] Length = 337 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 114/325 (35%), Gaps = 47/325 (14%) Query: 33 WKIVYADFMTVLMAFFLVM-------WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 W I YAD M L+ F+++ + + TD + F +L + K + Sbjct: 12 W-IAYADLMAGLLFVFVLLVGGIIVKYFLTQTDLQKTQQ---NFANVLSSLQDSKKKSAE 67 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 + + + L+++ + + ++ + + + N +++ + Sbjct: 68 LEALNKIFADKLDKLNVENEGLRKQNSIYFIQIEDLEEMAKKLKDENFDLNKTINKNVEI 127 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 D++ L K T E NK + ++ + L + K + D+ +K+ +++ Sbjct: 128 ISENDTKIAFLLDKLTQKESDFNKILHDLNVTKNRIRNLTGMKVKVITDIREKLGNSVKI 187 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------I 255 + ++ +FDK S + L++ Sbjct: 188 DNNGALT------------------LSSSVLFDKGSWAIKDDIKNELKRSLQGYFNALLN 229 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--DRISKIS 313 + + + + I I GHTD+ N LS +RA++ + + + S Sbjct: 230 NDEIRQNLDQIIIEGHTDSD---GDYIYNLALSQNRAFAVMDFINSWNKDDRLKKYIIAS 286 Query: 314 GFAHHRLKIAS--DPMNSANRRIDI 336 G + + + +++ RRI+I Sbjct: 287 GKSFMSPVLRDGVEDKDAS-RRIEI 310 >gi|54309732|ref|YP_130752.1| putative sodium-type flagellar protein MotY [Photobacterium profundum SS9] gi|46914170|emb|CAG20950.1| Putative sodium-type flagellar protein MotY [Photobacterium profundum SS9] Length = 296 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 42/104 (40%), Gaps = 4/104 (3%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 +D + + L +I + + +S ++ + T + N LS RA Sbjct: 190 YDMDNDELNKPSQRRLAQITDFVRYSDDIDLVLLATYSDSTGGTNV-NQSLSERRAKKLE 248 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + M G+ ++RI ++ + R +D + NRR+ I + Sbjct: 249 EYFMSLGLPKNRI-QVEAYGKRRPIADNDTPIGRNKNRRVVISL 291 >gi|157148115|ref|YP_001455434.1| putative outer membrane lipoprotein [Citrobacter koseri ATCC BAA-895] gi|157085320|gb|ABV14998.1| hypothetical protein CKO_03925 [Citrobacter koseri ATCC BAA-895] Length = 160 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 8/110 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +FDK+ PE+ ++++ LA + + + GHTD N LSL R Sbjct: 52 DNILFDKNDYKLRPESQQQIREMASRLAATGLKHARMDGHTDNY---GEDSYNEALSLKR 108 Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A + + + ++ G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAEGANIPRSNLTT-QGLGKKHPVASNQSAKGRAENRRVAVVI 157 >gi|153003801|ref|YP_001378126.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152027374|gb|ABS25142.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5] Length = 171 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 17/122 (13%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----------STEVISIRGHTDASPFRNI 280 ++N F + P ++++ L + GHTD+ Sbjct: 53 RKNQCSFKTDTDELEPGCDAKMKRLANALVDAKKQLNGAGVQNFKFVVSGHTDS---SGS 109 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN--SANRRIDIL 337 A+ N LS RA + L+ +G+ +D I + G R + D + NRR ++ Sbjct: 110 AKHNDALSAKRAAVVERELVANGIPKDEIQSV-GMGSKRPLVKPDDTPAKKAKNRRYELQ 168 Query: 338 VE 339 V+ Sbjct: 169 VK 170 >gi|195941898|ref|ZP_03087280.1| outer membrane protein (tpn50) [Borrelia burgdorferi 80a] Length = 380 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I + + + + +K + E GI +S + F +S L + + I ++ Sbjct: 244 IETEVENYIREKKIKAIKVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 298 Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316 L I I GHT+ + + LS RA + L+K V +D+I G+ Sbjct: 299 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 354 Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340 + K S P+ + NRR++I + + Sbjct: 355 SQKPKYPKSSPLKAKNRRVEITILN 379 >gi|148547176|ref|YP_001267278.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1] gi|148511234|gb|ABQ78094.1| OmpA/MotB domain protein [Pseudomonas putida F1] Length = 435 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 69/224 (30%), Gaps = 14/224 (6%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 R L+ ++ + + + + +++ ++LP K + Sbjct: 217 GTDRQAIGFSSLAAVHGAKVLAVAEGDAPAMLPERARVASEDYPLSRRLYFYLPANPKPQ 276 Query: 183 ILAMKRKKRLQDLAKKISST---LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 A+ + I+ + A ++ + + F + Sbjct: 277 AKALADFAQSPAGQAIIAQQGFVSQQIKALSVAPQSDMPPRYRILALQAQRLSVNFRFQE 336 Query: 240 SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 S+ + + +Q++ E L + G D A LS RA + Sbjct: 337 GSARLDNKALRDVQRVAEYLRQAGKLQGKAVLVGFGDPKETPGRAAL---LSRLRAQAVR 393 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 + L + GV + +++G ++ NRR+++ V Sbjct: 394 RELARGGVE---VLQVTGMGDELPVAGNEQEQGRLRNRRVEVWV 434 >gi|330447679|ref|ZP_08311327.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491870|dbj|GAA05824.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 508 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 11/117 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + +F S L++ E L H + + GHT R N +LS Sbjct: 393 KTRPVIFSSGSDQLTANGKQQLRQTAESLTHYPKFRILVEGHT---GLRGDKALNEQLSA 449 Query: 290 DRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKI--ASDPMNS-ANR--RIDILVED 340 RA + L+ + G RI I G + + ANR R++I + Sbjct: 450 QRAKAVKHYLVNELGFEARRIHAI-GKGSKEPLERLSGESQRRYANRLMRVEIALLS 505 >gi|83647595|ref|YP_436030.1| outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] gi|83635638|gb|ABC31605.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] Length = 187 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%) Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 G + E +++ + ++ L + + D + Sbjct: 19 AAGCTSTDTRPDETVGVVDQDGADAGGVGLGNGSGLSEEELAEQQRLAEQNAMTAEQDAL 78 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RG 270 + +F FD +I PE+ + L+ +LA + V + G Sbjct: 79 REVRVFY------------------FDFDKTIVKPESHMSLRAHAALLAANPAVKVVLNG 120 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMN 328 + D N L RA + + L+ +G ++ +I +S + ++ Sbjct: 121 YADER---GTKEYNLALGERRAQAIERFLVVNGANDSQIETVS-YGEEFPVDPAHNEAAW 176 Query: 329 SANRRIDI 336 + NRR+ I Sbjct: 177 NKNRRVVI 184 >gi|237798824|ref|ZP_04587285.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021677|gb|EGI01734.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 389 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 72/267 (26%), Gaps = 20/267 (7%) Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 G ++ + N Sbjct: 34 WQFGSGSESSDTGAAANAPAPSPAPAPAPAPVAKAAAAPAPAAGAESSAPWYWPFGSNDN 93 Query: 137 SQQSEHCKNSLTRDSEKGKDLCKST--DLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 +Q S D + KS + P + + L + Sbjct: 94 AQAKPDAVASKPADKPAAPLIAKSETDSKWWWPFGSADKTDQPKALPTPDPKVTQAWLDE 153 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQ 253 ++ + + E + I+ F+ L P T+ + Sbjct: 154 YEPRLRAAIKDSPFQ-------LERREDLLAIT---APVDSSFNPDRPAMLLPNTLGPIT 203 Query: 254 KIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 ++ +V+ + + GH D N ++S +RA S + SG+ +R+ + Sbjct: 204 RLAKVVEGDQKTAVLVLGHGDT---SGPTEANQKISQERAQSVAAIFRLSGLERNRL-SL 259 Query: 313 SGFAHHRLKIASDP--MNSANRRIDIL 337 G + A+D + NRR++IL Sbjct: 260 RGMGAVMPRAANDSLQGRALNRRVEIL 286 >gi|126046392|gb|ABN73089.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNKERMKDRKVVV 358 >gi|312200527|ref|YP_004020588.1| OmpA/MotB domain protein [Frankia sp. EuI1c] gi|311231863|gb|ADP84718.1| OmpA/MotB domain protein [Frankia sp. EuI1c] Length = 188 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 12/107 (11%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +FD S +P+ ++KI + + I G TD N LS RA + Sbjct: 91 LFDVGSDKLVPDAAAEIEKIVPAIQTHDGPVQILGFTDGV---GTDSYNQDLSQRRADAV 147 Query: 296 YQVLMKSGVSEDRISKISGFA-HHRLK-IASDPMNSANRR-IDILVE 339 +L+ +GV + + G + RR ++I+++ Sbjct: 148 KAILVGAGVKAS-LLQAIGKGSDGAPAGVPDST-----RRKVEIVLK 188 >gi|262193343|ref|YP_003264552.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262076690|gb|ACY12659.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 254 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 34/106 (32%), Gaps = 13/106 (12%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + + VL + E + + + + GHTD N LS RA Sbjct: 155 VYFDFDEAGIRDDAREVLTQAAECIRQAPADSGVYVEGHTD---GSGTEEYNVALSERRA 211 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 + + L + G+ R + +RR++ Sbjct: 212 RTVTEFLERLGIDPGRF-SVIAKGEGVP-----SGEGTDKDRRVEF 251 >gi|157373221|ref|YP_001471821.1| hypothetical protein Ssed_0080 [Shewanella sediminis HAW-EB3] gi|157315595|gb|ABV34693.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3] Length = 304 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 93/298 (31%), Gaps = 29/298 (9%) Query: 45 MAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDE 104 ++FFL++ I + P + + F Q + + + L Sbjct: 12 LSFFLLISNIATASSTRYQ------TPLEQAKWDFTGNRFICQIEHKVNGFGEFKLIARP 65 Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 + + + ++ Q + + S + K ++ + Sbjct: 66 GTSLSLQLDADWLSFEQTTSQAKVVSPSWSQTDSLSSGATH--------LKWHGRTAISD 117 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + +K L+ + ++ + + I++ + +L + Sbjct: 118 DTTSKFLEALEQGLAWQVLILARDGISYKVETSPINTQAIANKFKLCRQELLPKPFSYVR 177 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIAR 282 + I F+ +S V L+ I + + + + I + H DA Sbjct: 178 RVDIQ-------FESGTSKLTAAHEVDLEAIAQYVQADATVKEILVDAHADA---SGEHL 227 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 N LS +RA L + G+ + +I ++ ++++ NRR+ I + Sbjct: 228 ANLVLSKERADEVASRLFELGIQKQKI-QVRHHGARSPIVSNNSPEGREINRRVTIRL 284 >gi|57168163|ref|ZP_00367302.1| probable periplasmic protein Cj0599 [Campylobacter coli RM2228] gi|57020537|gb|EAL57206.1| probable periplasmic protein Cj0599 [Campylobacter coli RM2228] Length = 316 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 97/330 (29%), Gaps = 52/330 (15%) Query: 24 DDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGI 83 + W I YAD M L+ F+++ + + Sbjct: 2 KNEQEEGNFW-IAYADLMAGLLFVFILLI--------------------------GAIVV 34 Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS-QQSEH 142 + + + ++ +L+ K L N L+ Q Sbjct: 35 KYVLTQSDLREIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLINSQKAE 94 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK---I 199 + ++T + K+L S D + L +E + + ++ + I Sbjct: 95 LEANITNYEQLSKELNSSIDNKDKQILILLGQLEKKDEEIRNLQESFDKAKEKVQNLSLI 154 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ------ 253 LS + + + + I + + +FDK S E L+ Sbjct: 155 RENLSKELQAKLDSNITIDQKTGSISL-----PSEVLFDKDSYTLKNEAKASLRKILSEY 209 Query: 254 ----KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--D 307 + + E I I GHTD+ N LS RAY + Sbjct: 210 FNAIINDPKILSNIENIIIEGHTDSD---GSYIYNLDLSQKRAYEVMNFIYTFYKDTRLQ 266 Query: 308 RISKISGFAHHRLKIASDPMN-SANRRIDI 336 ++ SG + + + + +RRI+I Sbjct: 267 KLLMASGRSFSDPVLVNGVEDKDKSRRIEI 296 >gi|253990432|ref|YP_003041788.1| peptidoglycan-associated outer membrane lipoprotein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781882|emb|CAQ85046.1| peptidoglycan-associated lipoprotein [Photorhabdus asymbiotica] Length = 175 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 33/106 (31%), Gaps = 7/106 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 N F + +L L + + GH D N L Sbjct: 69 NNNIVYFGFDKYDISSDFSQLLDAHAAFLRSNPSYKVVVEGHADER---GTPEYNIALGE 125 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 RA + L GVS ++IS +S + + + + NRR Sbjct: 126 RRANAVKMYLQGKGVSGEQISIVS-YGKEKPAVLGHDEAAYAKNRR 170 >gi|226942084|ref|YP_002797158.1| Pal [Laribacter hongkongensis HLHK9] gi|226717011|gb|ACO76149.1| Pal [Laribacter hongkongensis HLHK9] Length = 169 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 + + FD SS E V++ + L +T I+G+TDA N L Sbjct: 60 SKRSVYFDFDSSAVKGEYRPVVEAHAQYLKQNTARKAQIQGNTDAR---GSREYNLALGQ 116 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 R+ S Q + GV E ++ +S F + + + NRR D++ Sbjct: 117 RRSESVKQAMRVLGVPEAQLEAVS-FGKEKPRATGTTAADYAENRRADVV 165 >gi|126665979|ref|ZP_01736959.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter sp. ELB17] gi|126629301|gb|EAZ99918.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter sp. ELB17] Length = 305 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 10/115 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLS 288 Q + +F +S L K+ + + + + GHTD DN +L+ Sbjct: 182 QGSQILFSSASVALSDADRRSLDKVVVYVLADSTVTKVLVDGHTDRR---GSRIDNRKLA 238 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 DRA + L GV E RI + + + +P + NRR+ I +R+G Sbjct: 239 QDRADAVAGYLKSQGVEESRI-TVRAHGD-QFAASGNP--AQNRRVVIR-MEREG 288 >gi|288919975|ref|ZP_06414296.1| OmpA/MotB domain protein [Frankia sp. EUN1f] gi|288348628|gb|EFC82884.1| OmpA/MotB domain protein [Frankia sp. EUN1f] Length = 212 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 55/206 (26%), Gaps = 12/206 (5%) Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 ++ + L S P + A + L + Sbjct: 6 AADRGARRAVGPALAVCALACVLVGPGSPRALGATADPSAAGPTRSADVPDEHLTASVRG 65 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + +S L D T ++ +F S+ + K+ Sbjct: 66 LDTAVSVLPIDLADAVSPLHTEERRDDQVVVTISADVLFAFDSADLTDVARAEITKLAPR 125 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + TE +++ GHTD N LS RA + VL + +G Sbjct: 126 VRPGTETVTVLGHTDKL---GTPAYNVMLSQRRADAVAGVLRSL-LPAGTRVSATGRGGA 181 Query: 319 RLKIASD--------PMNSANRRIDI 336 + + NRR+ I Sbjct: 182 DPVTPNSHPDGSDDPDGRALNRRVQI 207 >gi|257095753|ref|YP_003169394.1| peptidoglycan-associated lipoprotein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048277|gb|ACV37465.1| peptidoglycan-associated lipoprotein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 176 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + + FD S E ++ + L + + I+G+TD N L Sbjct: 66 SKRSVYFDFDSYEVKSEYKDLVTAHAKFLTDNRQFKMLIQGNTDER---GSREYNLALGQ 122 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333 RA + ++L G ED++ +S + K + + NRR Sbjct: 123 KRADAVRKMLTLLGAREDQLESVS-LGEEKPKNEGHDESAWAQNRR 167 >gi|302536573|ref|ZP_07288915.1| type VI secretion system OmpA/MotB [Streptomyces sp. C] gi|302445468|gb|EFL17284.1| type VI secretion system OmpA/MotB [Streptomyces sp. C] Length = 212 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 63/204 (30%), Gaps = 9/204 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 + + + G + D + S+ A K Sbjct: 8 AAATAVAGLVIAGTHLLGATSAHADDPKPSVPPGTEPSAAAPVPIDSNAPGLKIPQGGTL 67 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 I V +++ + T +++++ ++ +F ++S++ + +Q I Sbjct: 68 APIKVLDIAEVVEDLGGEQRRQETNQNVMMAL---QSEVLFPENSAVFNAQAASRIQAIA 124 Query: 257 EVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 + + I + G TD LS RA + L K+ + + G+ Sbjct: 125 QEINTQKATRIRVFGFTDDQ---GSYEHGKELSKQRADAVQAELAKTVTNPAVTYDVRGY 181 Query: 316 AHHRLKIASDPMNSA--NRRIDIL 337 + + NRR++I Sbjct: 182 SEDYPIADNSTEEGRKKNRRVEIT 205 >gi|90577378|ref|ZP_01233189.1| putative sodium-type flagellar protein MotY precursor [Vibrio angustum S14] gi|90440464|gb|EAS65644.1| putative sodium-type flagellar protein MotY precursor [Vibrio angustum S14] Length = 298 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 9/114 (7%) Query: 228 IIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDN 284 D R+ + F + +L + L H V + GHTD N Sbjct: 175 YRDARDVVLQFQLGQRVVSSSQKQILADLASYLKHDKNVKRVLIDGHTDNV---GSNVAN 231 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++S RA +L ++GV + ++ ++ + NRR+ I Sbjct: 232 LQISKIRADDVASILRENGVRSS-LIEVRSHGSRYPVANNNTQHGKAKNRRVTI 284 >gi|332754029|gb|EGJ84401.1| ompA family protein [Shigella flexneri K-671] gi|333015875|gb|EGK35211.1| ompA family protein [Shigella flexneri K-304] Length = 127 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 6/109 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 19 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 75 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A G G ++ + NRR+ +++ Sbjct: 76 ANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVI 124 >gi|284042425|ref|YP_003392765.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684] gi|283946646|gb|ADB49390.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684] Length = 716 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 8/109 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + F L + + I L V GHTD+ N L L R Sbjct: 611 PSDGQFRVGDDTLLAQGRRYARAIAPQLKGVKRVTC-TGHTDSD---GGVVANRALGLAR 666 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + L + GV + R + +D NRR+++ + Sbjct: 667 AKAVCAELRRLGVKAP--LRTRSAGESRPRATNDTAQGRRLNRRVELTL 713 >gi|78062395|ref|YP_372303.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383] gi|77970280|gb|ABB11659.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 163 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD PE +LQ + L + I+G+TD + N L R+ + Sbjct: 62 FDFDQYSVKPEYQSLLQAHADYLRSHPSRHVLIQGNTDER---GTSEYNLALGQRRSQAV 118 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 L GV ++ +S + + + NRR D++ Sbjct: 119 MSGLETLGVPATQLEAVS-LGKEKPVALGHDEDSWAQNRRADLV 161 >gi|269104725|ref|ZP_06157421.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268161365|gb|EEZ39862.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 188 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 63/171 (36%), Gaps = 9/171 (5%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 +S ++ + K L+D AD + V+ + + + Sbjct: 9 SISAQQPPVATQTKDLRDFDSDGVINARDKCADTPLGAVVDNDGCPTYVKTDEKNSVHVL 68 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S++ + L+K + L E I ++G+ + N LS RA + Sbjct: 69 FANDSTVIPETYMAQLKKTAQFLETFPETHIELKGYASPV---GNSAHNQYLSDTRAANV 125 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVEDRQG 343 Q L+ GV+ DRI + GF ++ ++N RR+ V +G Sbjct: 126 RQQLIDFGVAADRIKTV-GFGDADPI-QAETSEASNTLSRRVVAQVVGSKG 174 >gi|158318969|ref|YP_001511477.1| OmpA/MotB domain-containing protein [Frankia sp. EAN1pec] gi|158114374|gb|ABW16571.1| OmpA/MotB domain protein [Frankia sp. EAN1pec] Length = 200 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 57/197 (28%), Gaps = 18/197 (9%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + + L E L S A + + + + + S L D Sbjct: 6 GRAARLALVTAALWVLAGAESPGALGATSAPPPPADVPAEEITRSVRPLDAAGSVLTIDP 65 Query: 211 IV---KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 V E + + ++I +F S + + + +T ++ Sbjct: 66 ADSVLPLVTEERSGDRVTVTISAD---VLFAFDSDDLTEAARTEIATLAGRVGPATRTVT 122 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--- 324 + GHTD+ N LS RA + +L + V +G + Sbjct: 123 VLGHTDSL---GTPAYNVILSQRRANAVADLL-RPAVPSGTRVSATGRGGADPVAPNTRP 178 Query: 325 -----DPMNSANRRIDI 336 + NRR+ I Sbjct: 179 DGSDDAAGRALNRRVQI 195 >gi|147674163|ref|YP_001216480.1| sodium-type flagellar protein MotY [Vibrio cholerae O395] gi|229529898|ref|ZP_04419288.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae 12129(1)] gi|146316046|gb|ABQ20585.1| sodium-type flagellar protein MotY [Vibrio cholerae O395] gi|227012825|gb|ACP09035.1| sodium-type flagellar protein MotY [Vibrio cholerae O395] gi|229333672|gb|EEN99158.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae 12129(1)] Length = 294 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 91/298 (30%), Gaps = 19/298 (6%) Query: 51 MWIINATDDDTKKAI-EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 ++ I+ A+ +Y ++ + E K Sbjct: 9 LFAISMLSASVASALEVRYVATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKI 68 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 ++D ++ + + + + + ++ +++ Sbjct: 69 NLDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSE 128 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 E P S + + ++ + +SS L + + + IS Sbjct: 129 LEKGRYPTFSYQDWQSRDQRIEVA-----LSSVLFQQPYNEFSDCISKLLPYSFEDISFT 183 Query: 230 DQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWR 286 +D+ S + L +I E + ++ ++ + +TD++ N + Sbjct: 184 ILH----YDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNS---QN 236 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS RA + G+ EDRI ++ G+ R + NRR+ I + Q Sbjct: 237 LSEQRAEVLREYFKSIGLPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293 >gi|170701074|ref|ZP_02892051.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria IOP40-10] gi|172059753|ref|YP_001807405.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MC40-6] gi|170134014|gb|EDT02365.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria IOP40-10] gi|171992270|gb|ACB63189.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MC40-6] Length = 169 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 67 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + + NRR D++ Sbjct: 124 RRAMALLGVNDSQMEAVS-LGKEKPQASGHDEASWAQNRRADLV 166 >gi|83816525|ref|YP_446790.1| OmpA family protein [Salinibacter ruber DSM 13855] gi|83757919|gb|ABC46032.1| OmpA family protein [Salinibacter ruber DSM 13855] Length = 227 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 20/182 (10%), Positives = 45/182 (24%), Gaps = 9/182 (4%) Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + S + EN L + +++ + L + + + Sbjct: 21 APTRLPGASASSRLDSLRAENATLRSRLRRVEDSLRFRDDLATGQYYRDLRVLTDRLNRL 80 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIR 269 V + + +F+ ++ L+ L + + Sbjct: 81 AYEVQMRRQGGRAVRVLPAD---SLFEAGTATLTAAGKKRLRATIAHLETAYPTRAVRVE 137 Query: 270 GHTDASPFRN----IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 GH D +P NW LS RA + + L + ++ Sbjct: 138 GHADDTPLSEALQERFASNWELSAARATAVVRYLSARSALAPSQFAALAYGATDPVASNA 197 Query: 326 PM 327 Sbjct: 198 TA 199 >gi|59801906|ref|YP_208618.1| Omp3 [Neisseria gonorrhoeae FA 1090] gi|194099400|ref|YP_002002501.1| Omp3 [Neisseria gonorrhoeae NCCP11945] gi|239999644|ref|ZP_04719568.1| Omp3 [Neisseria gonorrhoeae 35/02] gi|240014818|ref|ZP_04721731.1| Omp3 [Neisseria gonorrhoeae DGI18] gi|240017267|ref|ZP_04723807.1| Omp3 [Neisseria gonorrhoeae FA6140] gi|240081094|ref|ZP_04725637.1| Omp3 [Neisseria gonorrhoeae FA19] gi|240113304|ref|ZP_04727794.1| Omp3 [Neisseria gonorrhoeae MS11] gi|240116345|ref|ZP_04730407.1| Omp3 [Neisseria gonorrhoeae PID18] gi|240118630|ref|ZP_04732692.1| Omp3 [Neisseria gonorrhoeae PID1] gi|240121340|ref|ZP_04734302.1| Omp3 [Neisseria gonorrhoeae PID24-1] gi|240124175|ref|ZP_04737131.1| Omp3 [Neisseria gonorrhoeae PID332] gi|240126207|ref|ZP_04739093.1| Omp3 [Neisseria gonorrhoeae SK-92-679] gi|240128845|ref|ZP_04741506.1| Omp3 [Neisseria gonorrhoeae SK-93-1035] gi|254494359|ref|ZP_05107530.1| outer membrane protein P.III [Neisseria gonorrhoeae 1291] gi|260439836|ref|ZP_05793652.1| Omp3 [Neisseria gonorrhoeae DGI2] gi|268595455|ref|ZP_06129622.1| outer membrane protein PIII [Neisseria gonorrhoeae 35/02] gi|268597207|ref|ZP_06131374.1| outer membrane protein PIII [Neisseria gonorrhoeae FA19] gi|268599383|ref|ZP_06133550.1| outer membrane protein P.III [Neisseria gonorrhoeae MS11] gi|268602011|ref|ZP_06136178.1| outer membrane protein P.III [Neisseria gonorrhoeae PID18] gi|268604343|ref|ZP_06138510.1| outer membrane protein P.III [Neisseria gonorrhoeae PID1] gi|268682799|ref|ZP_06149661.1| outer membrane protein P.III [Neisseria gonorrhoeae PID332] gi|268684790|ref|ZP_06151652.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-92-679] gi|268687227|ref|ZP_06154089.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-93-1035] gi|291043111|ref|ZP_06568834.1| outer membrane protein PIII [Neisseria gonorrhoeae DGI2] gi|293398450|ref|ZP_06642628.1| outer membrane protein P.III [Neisseria gonorrhoeae F62] gi|129131|sp|P07050|OMP3_NEIGO RecName: Full=Outer membrane protein P.III; AltName: Full=Gonococcal protein III; Short=PIII; Flags: Precursor gi|44890|emb|CAA28752.1| unnamed protein product [Neisseria gonorrhoeae] gi|59718801|gb|AAW90206.1| outer membrane protein PIII [Neisseria gonorrhoeae FA 1090] gi|193934690|gb|ACF30514.1| Omp3 [Neisseria gonorrhoeae NCCP11945] gi|226513399|gb|EEH62744.1| outer membrane protein P.III [Neisseria gonorrhoeae 1291] gi|268548844|gb|EEZ44262.1| outer membrane protein PIII [Neisseria gonorrhoeae 35/02] gi|268550995|gb|EEZ46014.1| outer membrane protein PIII [Neisseria gonorrhoeae FA19] gi|268583514|gb|EEZ48190.1| outer membrane protein P.III [Neisseria gonorrhoeae MS11] gi|268586142|gb|EEZ50818.1| outer membrane protein P.III [Neisseria gonorrhoeae PID18] gi|268588474|gb|EEZ53150.1| outer membrane protein P.III [Neisseria gonorrhoeae PID1] gi|268623083|gb|EEZ55483.1| outer membrane protein P.III [Neisseria gonorrhoeae PID332] gi|268625074|gb|EEZ57474.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-92-679] gi|268627511|gb|EEZ59911.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-93-1035] gi|291012717|gb|EFE04700.1| outer membrane protein PIII [Neisseria gonorrhoeae DGI2] gi|291610921|gb|EFF40018.1| outer membrane protein P.III [Neisseria gonorrhoeae F62] gi|317164900|gb|ADV08441.1| Omp3 [Neisseria gonorrhoeae TCDC-NG08107] Length = 236 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 5/115 (4%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTE 264 V + V + I +F E L+ + + L + + Sbjct: 68 AVPEPEPAPVAVVEQAPQYVDETISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNVQ 127 Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + GHTD F + N LS RAY L+ +GV RIS + G + Sbjct: 128 SVRVEGHTD---FMGSEKYNQALSERRAYVVANNLVSNGVPASRISAV-GLGESQ 178 >gi|330448674|ref|ZP_08312322.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492865|dbj|GAA06819.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 180 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 43/121 (35%), Gaps = 7/121 (5%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARD 283 + I + F S P + L VL + + G TD Sbjct: 38 QVVIDAWPSVVNFGFDKSELTPAEMSRLANAVNVLQQNPSFKVAVVGSTDPE---GSEEY 94 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 N LS+ RA L G+S R++ I G L I +D N ANRR +++ D Sbjct: 95 NDALSMRRAQVVGDYLQSQGISSSRMTLI-GTGERELFIHTDSRSDNRANRRTQLILLDA 153 Query: 342 Q 342 Sbjct: 154 N 154 >gi|329755866|gb|AEC04330.1| outer membrane protein A [Pasteurella multocida] Length = 359 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ + F + P VL I +A Sbjct: 216 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 275 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 276 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 331 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +R ++I V+ + Sbjct: 332 CDSVKGRKALIACLADDRPVEIAVKGNK 359 >gi|329755840|gb|AEC04317.1| outer membrane protein A [Pasteurella multocida] gi|329755846|gb|AEC04320.1| outer membrane protein A [Pasteurella multocida] gi|329755854|gb|AEC04324.1| outer membrane protein A [Pasteurella multocida] Length = 358 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ + F + P VL I +A Sbjct: 215 VTAGLSYRFGQSVYVPEVVSKTFTLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 274 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L+ GV+++ IS +G + Sbjct: 275 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLVAKGVAQNAISA-TGHGEANPVTGNK 330 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +R ++I V+ + Sbjct: 331 CDSVKGRKALIACLADDRPVEIAVKGNK 358 >gi|270339898|ref|ZP_06203472.1| OmpA family protein [Prevotella bergensis DSM 17361] gi|270333364|gb|EFA44150.1| OmpA family protein [Prevotella bergensis DSM 17361] Length = 694 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 57/180 (31%), Gaps = 35/180 (19%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 L ++ N + IS+ + +D + + V Sbjct: 483 LAACQGYLNHQEEVRALVNPKESRDTTLQFALANISVPTLIDNIFYDFDKATLRDTSKVA 542 Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L ++ +L + + + H D ++ + N RLS RA S L+ G++ DR++ Sbjct: 543 LDRLVTMLNENPNITIELSAHAD---YKGASTYNKRLSQRRAESVVNYLIAHGIAADRLT 599 Query: 311 KISGFAHHRLKIAS------------------------------DPMNSANRRIDILVED 340 + G+ + K + + N NRR + LV Sbjct: 600 PM-GYGKEKPKTVNRKVAEKYNWLKAGDVLSEEFIKAMKDEKKQEICNQLNRRTEFLVLR 658 >gi|209547147|ref|YP_002279065.1| OmpA/MotB domain-containing protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538391|gb|ACI58325.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 189 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ +S+ PE+ + I + L H I GH+ ++ A+ N LS RA Sbjct: 83 FENNSTAIEPESYRTVGLIADALHHPDLFRYKFLIVGHSSST---GSAKHNLELSQKRAD 139 Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + + L VS DR+ + G P ++ NRR+ ++ Sbjct: 140 AINEALSTTFAVSPDRLFSV-GAGEEWPINPGHPESADNRRVQLI 183 >gi|320540573|ref|ZP_08040223.1| putative outer membrane protein A (3a;II*;G;d) [Serratia symbiotica str. Tucson] gi|320029504|gb|EFW11533.1| putative outer membrane protein A (3a;II*;G;d) [Serratia symbiotica str. Tucson] Length = 382 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 28/129 (21%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S E L+++ L+ + + G+TDA + N +LS Sbjct: 252 KSDVLFNFNKSTLKAECQQSLEQLYTQLSSMDPKDGSVIVLGYTDAV---GSEQYNHKLS 308 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------------SAN 331 RA S L+ G+ D+IS G K S N + + Sbjct: 309 EKRAQSVVDFLISKGIPSDKISA-RGLG----KADSTTGNTCGYKSGRATKAQIDCLAPD 363 Query: 332 RRIDILVED 340 RR++I V+ Sbjct: 364 RRVEIEVKG 372 >gi|294508723|ref|YP_003572782.1| chemotaxis MotB protein [Salinibacter ruber M8] gi|294345052|emb|CBH25830.1| chemotaxis MotB protein [Salinibacter ruber M8] Length = 227 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 20/182 (10%), Positives = 45/182 (24%), Gaps = 9/182 (4%) Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + S + EN L + +++ + L + + + Sbjct: 21 APTRLPGASAPSRLDSLRAENATLRSRLRSVEDSLRFRDDLATGQYYRDLRVLTDRLNRL 80 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIR 269 V + + +F+ ++ L+ L + + Sbjct: 81 AYEVQMRRQGGRAVRVLPAD---SLFEAGTATLTAAGKKRLRATIAHLETAYPTRAVRVE 137 Query: 270 GHTDASPFRN----IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 GH D +P NW LS RA + + L + ++ Sbjct: 138 GHADDTPLSEALQERFASNWELSAARATAVVRYLSARSALAPSQFAALAYGATDPVASNA 197 Query: 326 PM 327 Sbjct: 198 TA 199 >gi|332519438|ref|ZP_08395905.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332045286|gb|EGI81479.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 289 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 8/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + FD L L +SI G TD N LS +R Sbjct: 23 HDVYFDTDEYNVPLTEENRLLLFISSLDSININKVSIYGFTDDR---GTNEYNLELSQNR 79 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM----NSANRRIDILVED 340 A + ++ GV + I+ ++G LK+ ++ NR+++I+V + Sbjct: 80 ANTIKELFSGYGVDPNLITNVNGKGEILLKVLNEEEVHQIRGLNRKVEIIVNE 132 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 9/114 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN----W 285 + + F S S ++ L+K+ ++L +I+GH + A D Sbjct: 174 RLDKIYFKTSYSYVTSDSKKTLEKLAKILVEKDNLYFTIQGHVCCTQNSRDAVDKKTKKR 233 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 LS+ RA Y L + GV + R+ + G DP RR++ILV Sbjct: 234 NLSVSRAKYIYDYLARKGVDKRRMKYV-GMRRKFPL-GGDPKYD--RRVEILVT 283 >gi|158337857|ref|YP_001519033.1| outer membrane protein A [Acaryochloris marina MBIC11017] gi|158308098|gb|ABW29715.1| outer membrane protein A, putative [Acaryochloris marina MBIC11017] Length = 513 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 30/241 (12%), Positives = 72/241 (29%), Gaps = 8/241 (3%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 +++ ST + + L + Q + ++ Sbjct: 278 LSQQIGKDGNLSTQDATSVSKGIDFFTALESHQWMNAGTLAKRIEATSAVLSLTGETAGL 337 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 N Y +++ + + + +++ L G + V + ++ Sbjct: 338 VQNPRALYTQDFIAQAVTNSEQLVASIAATDPELAKVLRGQKSSTTKAQVTPQQIQSAPQ 397 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIAR 282 + R F S++ ++ L+ + + + ++ GHT + A Sbjct: 398 VGNFKVRGEVKFATGSAVLSGDSQSTLKALAQEINEFNPSTIAVNVVGHTSKT---GSAA 454 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 N LS RA L GV + +++ GF+ + R +I + Sbjct: 455 TNQTLSQQRAQVVANFLRSQGVRPNLVAEGKGFSAQLPGVDPASPAQQ--RTEIQLRRVG 512 Query: 343 G 343 G Sbjct: 513 G 513 >gi|254509401|ref|ZP_05121484.1| sodium-type flagellar protein MotY (Polar flagellum motorprotein) [Vibrio parahaemolyticus 16] gi|219547675|gb|EED24717.1| sodium-type flagellar protein MotY (Polar flagellum motorprotein) [Vibrio parahaemolyticus 16] Length = 168 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294 +D++S ++ L +I E + H+ ++ + +TDA ++ + LS RA Sbjct: 62 YDRTSVELNKQSQKRLAQIAEYIRHNQDIDLVLVSTYTDAEDSKSAS---QNLSERRAEV 118 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 G+ EDRI ++ G+ R + NRR+ I + Q Sbjct: 119 LQDYFKSLGLPEDRI-RVQGYGKRRPVDDNASPIGKDRNRRVVISLGRTQ 167 >gi|298209291|ref|YP_003717470.1| OmpA family protein [Croceibacter atlanticus HTCC2559] gi|83849218|gb|EAP87087.1| OmpA family protein [Croceibacter atlanticus HTCC2559] Length = 665 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 19/154 (12%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSSIPLPETIVVLQ 253 L ++ + + + + + D + FD P+ V L Sbjct: 510 DEKLFTTPTESQMVELDLMLEKEIVKAEVGDDIGKLLKLEPIYFDFDKHNIRPDAAVELA 569 Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311 K+ V+ E+ +R HTD+ N RLS R S +++ G+S DR+ Sbjct: 570 KVIAVMNEYPEMKIDVRSHTDSR---GKDDYNMRLSERRNKSTINYIVERGGISRDRL-T 625 Query: 312 ISGFAHHRLKIA-------SDPMNSANRRIDILV 338 G+ L S + NRR + + Sbjct: 626 GRGYGESELINECANGIPCSREKHELNRRSEFRI 659 >gi|332664693|ref|YP_004447481.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332333507|gb|AEE50608.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 662 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 11/90 (12%) Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 +L + T + + HTD+ N +LS+ RA +A + L++ GV+ +RI + +GF Sbjct: 563 MLKYPTMEVELGAHTDSR---GTTEYNQQLSVRRAEAAKEFLVRKGVAANRI-RTTGFGE 618 Query: 318 HR-------LKIASDPMNSANRRIDILVED 340 + ++ + NRR ++ V Sbjct: 619 TQIRNHCKEGIECAEKEHQFNRRTEVKVLK 648 >gi|307261911|ref|ZP_07543571.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868382|gb|EFN00199.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 339 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 7/92 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD S P L +A+ T I + G+TD N +LS Sbjct: 245 SDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRI---GKEASNLKLSQ 301 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 RA + L+ G + ++ + G+ Sbjct: 302 RRAETVANYLVSKGQNPANVTAV-GYGEANPV 332 >gi|114327495|ref|YP_744652.1| outer membrane protein [Granulibacter bethesdensis CGDNIH1] gi|114315669|gb|ABI61729.1| outer membrane protein [Granulibacter bethesdensis CGDNIH1] Length = 149 Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 Q F +S P +++ +L+ + + G+TD A+DN LS Sbjct: 46 QNYFIFFAPDASQPKTDSLPILKVAVTYAKDHPDQNIIVVGYTDPV---GSAKDNHDLSE 102 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 +RA + + L+K+G+ + RI+ G + + N +RR++I Sbjct: 103 ERADTIRKDLIKAGIPQARITA-RGHGQTQP----EWNNQESRRVEI 144 >gi|84500462|ref|ZP_00998711.1| OmpA domain protein [Oceanicola batsensis HTCC2597] gi|84391415|gb|EAQ03747.1| OmpA domain protein [Oceanicola batsensis HTCC2597] Length = 309 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 53/143 (37%), Gaps = 14/143 (9%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HS 262 + + + + T +++ +D F ++ L ++ + Sbjct: 177 APEEPEADAELIDVLRTAGHVVLDDLD------FQSGAAALADREYTSLAELAVYIKGDP 230 Query: 263 TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLK 321 ++++ GHTDA N LS RA + Q L+ + GV+ ++S G Sbjct: 231 ARIVALVGHTDAV---GAHDANVALSRRRAEAVRQRLIDRHGVAGSQVSA-RGAGFLAPV 286 Query: 322 IASDPM--NSANRRIDILVEDRQ 342 ++ NRR++ ++ + Sbjct: 287 ASNLTALGRERNRRVEAVLLAAE 309 >gi|114562634|ref|YP_750147.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114333927|gb|ABI71309.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400] Length = 289 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294 + + + LQKI L+ EV + I +TD+ N ++S RA S Sbjct: 184 YQEGGVELTRFSSQQLQKIQRYLSFDPEVELVLIDAYTDSY---GGRSVNQKVSDKRADS 240 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDR 341 +L+ SG+ +DRI SG R +D NRR+ I + Sbjct: 241 VKDILIASGIPKDRIHT-SGHGEKRHVTGNDLAEERKMNRRVVIKITKP 288 >gi|257464737|ref|ZP_05629108.1| lipoprotein Plp4 [Actinobacillus minor 202] gi|257450397|gb|EEV24440.1| lipoprotein Plp4 [Actinobacillus minor 202] Length = 282 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 19/125 (15%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + V+ + L S + + + G+TD N LS R Sbjct: 141 GDFLFDFDKDTLTTKGKEVVDNVAAQLKSSKAQQVKVAGYTDRL---GSVNYNLDLSQRR 197 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI-----LV 338 A L++ GV+ +I + G+ A D + NRR+++ ++ Sbjct: 198 ANMVKARLVQQGVTA-QIEAV-GYGKANQVKACDGESGQALRDCLRPNRRVEVSANGGVL 255 Query: 339 EDRQG 343 + +G Sbjct: 256 KQSEG 260 >gi|254490152|ref|ZP_05103343.1| peptidoglycan-associated lipoprotein, putative [Methylophaga thiooxidans DMS010] gi|224464638|gb|EEF80896.1| peptidoglycan-associated lipoprotein, putative [Methylophaga thiooxydans DMS010] Length = 188 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 F+ S+ E LQ LA + + GHTD N L Sbjct: 79 SNRVVYFEYDSATVRVEDQETLQAHAAYLAKKPNLTLRLEGHTDER---GAREYNLALGE 135 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 RA S Q+LM G S ++ +++ F R S NRR++++ Sbjct: 136 RRALSIRQILMLQGASINQF-QVTSFGEERPAEEGSSEYAWSQNRRVELV 184 >gi|126046408|gb|ABN73092.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIGSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|332664418|ref|YP_004447206.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332333232|gb|AEE50333.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 289 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 9/109 (8%) Query: 236 MFDKSSSIPLP--ETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292 F P + + + LA SI GHTD++ A++N +L L+RA Sbjct: 185 SFAPDGVEFRPILPLVQYADSVRQYLALHKNKKLSIIGHTDST---GDAKNNLKLGLERA 241 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 + + + G+ +++ S + NRRI+ ++E Sbjct: 242 QNTMRYFRELGIPPSQMAAYS-EGSKHPVSDNSTEVGKRRNRRINFIIE 289 Score = 43.0 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 TD + +N LS RA + +++++ G+S R++ Sbjct: 105 TDEETAASGFFENLGLS--RADAVRKLMIQRGISPGRVT 141 >gi|107021874|ref|YP_620201.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116688822|ref|YP_834445.1| OmpA-like protein [Burkholderia cenocepacia HI2424] gi|170732121|ref|YP_001764068.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia MC0-3] gi|206561548|ref|YP_002232313.1| putative OmpA family lipoprotein [Burkholderia cenocepacia J2315] gi|105892063|gb|ABF75228.1| OmpA/MotB [Burkholderia cenocepacia AU 1054] gi|116646911|gb|ABK07552.1| OmpA-like protein [Burkholderia cenocepacia HI2424] gi|169815363|gb|ACA89946.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia MC0-3] gi|198037590|emb|CAR53528.1| putative OmpA family lipoprotein [Burkholderia cenocepacia J2315] Length = 170 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 68 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 124 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + NRR D++ Sbjct: 125 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 167 >gi|330966520|gb|EGH66780.1| ompA family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 320 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 69/212 (32%), Gaps = 11/212 (5%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 ++ S + K K + + + + + K+ Sbjct: 19 PWYWPFGSNDNAQAKPDAVASKPADKPAAPAMVAKSETDTKWWWPFGAEGKKDEPKALPM 78 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248 L+ + L A E + I+ F+ L P T Sbjct: 79 PDLKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNT 135 Query: 249 IVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + + ++ +V+ + I GH D N ++S +RA S + SG+ + Sbjct: 136 LGPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERN 192 Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDIL 337 R+S+ G + A+D + NRR++IL Sbjct: 193 RLSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 223 >gi|282881633|ref|ZP_06290296.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1] gi|281304392|gb|EFA96489.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1] Length = 717 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 49/119 (41%), Gaps = 5/119 (4%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 L + + + + I++ + +D + E+ L + ++L ++ Sbjct: 518 EELQVEPVKESKEYTLQFPLASITVPVLIDNIFYDFDKATLRLESKKALDDLVKLLNENS 577 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I + H D ++ N RL+ RA + + L+ G+++DR+ + G+ + K Sbjct: 578 HVTIELSAHCD---YKGSKEYNQRLAQRRAEAVVRYLIDKGIAKDRLKPV-GYGKEKPK 632 >gi|254476085|ref|ZP_05089471.1| OmpA family protein [Ruegeria sp. R11] gi|214030328|gb|EEB71163.1| OmpA family protein [Ruegeria sp. R11] Length = 196 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 8/112 (7%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWR 286 +Q F +S+ PE L ++ VL+ + + GHTD+ + N R Sbjct: 79 EQGYFIRFPFNSNALTPEYEAHLARLAAVLSSAQLQNSCVKLVGHTDSI---GSDQFNMR 135 Query: 287 LSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 LS RA L ++ GV+ +RI S L + NRR++IL Sbjct: 136 LSKTRAQRVAAYLALEGGVAMERIQTAS-LGEKHLIKGLPGPHPLNRRVEIL 186 >gi|109899245|ref|YP_662500.1| OmpA/MotB [Pseudoalteromonas atlantica T6c] gi|109701526|gb|ABG41446.1| OmpA/MotB [Pseudoalteromonas atlantica T6c] Length = 186 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 8/160 (5%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 P +E R Q A + ++ + + A N+ + E ++++ + Sbjct: 26 PSEEELAAESNRVAAAQAEADRKAAEEAKVQAGNMKPMLSPEEVMQKEKSALMEDQ-VVY 84 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + +L + L + + GH D N L RA S Sbjct: 85 FDFDRSSVSSKYYSLLDQHAAFLVKNPGQAVVIEGHCDNR---GTPEYNIALGERRAKSV 141 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 LM +GVS ++S +S + + S + NRR Sbjct: 142 ETYLMNAGVSASQVSVVS-YGEEKPVDTSGTAAAFAENRR 180 >gi|222823912|ref|YP_002575486.1| chemotaxis protein MotB, [Campylobacter lari RM2100] gi|222539134|gb|ACM64235.1| chemotaxis protein MotB, putative [Campylobacter lari RM2100] Length = 316 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 104/320 (32%), Gaps = 53/320 (16%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+++ + + + Sbjct: 14 W-IAYADLMAGLLFIFILLI--------------------------GAIVVKYVLTQSDL 46 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS--LTRD 150 + +E + +N +L K Q+L N L + + + + + Sbjct: 47 QIIKENLQKQEERLRENKEELNQKEDILKNLSQKLNNTSSTLDDVNKQKQALEANITKLN 106 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + L + ++ + N + + + + K ++++L +T+ L A Sbjct: 107 QDLNSSLDEKDQQIFALLERLNKKDEEIKELESNFEEAKSKIKELGLIKENTIKNLQAKF 166 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK----------IGEVLA 260 L T +L + +FD +S + L+ E + Sbjct: 167 DTNITLDSNTGAIVL------PSEVLFDTNSFTLKAQAKENLKTILTQYFDNILKDENIL 220 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--DRISKISGFAHH 318 +S E I I GHTD+ N LS RAY+ + ++ SG ++ Sbjct: 221 NSIENIVIEGHTDS---AGSYIYNLDLSQKRAYAVMSFIHSFYKDPRLQKLLMASGRSYS 277 Query: 319 RLKIAS--DPMNSANRRIDI 336 + + ++ RRI+I Sbjct: 278 DVITKDGKEDKEAS-RRIEI 296 >gi|295690965|ref|YP_003594658.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756] gi|295432868|gb|ADG12040.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756] Length = 386 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 38/114 (33%), Gaps = 7/114 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286 + F + PE V+Q+ + I + GHTD N R Sbjct: 275 YESREFVVYFPFDQYVLTPEAQAVVQQAADYAKGGGATKIVVTGHTDT---SGSDAYNRR 331 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 LS RA + L+ GV+ + + +A+ NRR + + Sbjct: 332 LSERRAKAVADGLVGMGVNATAL-AVDWKGESAPAVATGDGVKEPLNRRSTVSI 384 >gi|85708815|ref|ZP_01039881.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1] gi|85690349|gb|EAQ30352.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1] Length = 378 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 FD S E +L ++ + + GHTD N L+ Sbjct: 267 PYIVFFDFDESAITSEAATILDNAVTAYSNCGSARVMLAGHTDTV---GSQSYNLDLAAR 323 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 R S Q L GV+ + F L++ + NRR++I Sbjct: 324 RNASVQQYLTGRGVARS-MIASEAFGESDLRVPTADGVRELQNRRVEIT 371 >gi|254246221|ref|ZP_04939542.1| OmpA/MotB [Burkholderia cenocepacia PC184] gi|124870997|gb|EAY62713.1| OmpA/MotB [Burkholderia cenocepacia PC184] Length = 183 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 81 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 137 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + NRR D++ Sbjct: 138 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 180 >gi|288918113|ref|ZP_06412470.1| OmpA/MotB domain protein [Frankia sp. EUN1f] gi|288350495|gb|EFC84715.1| OmpA/MotB domain protein [Frankia sp. EUN1f] Length = 186 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 6/104 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +FD S + PE L I + + + G++D N LS +RA + Sbjct: 89 LFDADSDVLRPEAATALAGIVPQIREHDGKVQVVGYSDGL---GSTEHNLELSRERAVAV 145 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 L + + ++ + S RR++I++ Sbjct: 146 QTYLTSQDIPAA-MLEVVAKGEAG-AADNVADASR-RRVEIVLR 186 >gi|254506228|ref|ZP_05118371.1| outer membrane protein [Vibrio parahaemolyticus 16] gi|219550708|gb|EED27690.1| outer membrane protein [Vibrio parahaemolyticus 16] Length = 203 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292 +F S + P + ++++ + L ++G+ N LS RA Sbjct: 81 HILFANDSDVVQPIFMTQIRELADFLEEYPSTTVELQGYASKV---GRPDYNLELSKRRA 137 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 + +L+ + DR+ I GF L + + ++ NR++ V +G Sbjct: 138 EAVENLLLDYQLDADRV-TIVGFGDTNLSVEGDDEQAHAQNRKVVASVIGHKG 189 >gi|197103803|ref|YP_002129180.1| OmpA family protein [Phenylobacterium zucineum HLK1] gi|196477223|gb|ACG76751.1| OmpA family protein [Phenylobacterium zucineum HLK1] Length = 410 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 9/111 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289 ++ F + PE V+ + + + + GH D N RLS Sbjct: 302 KQFIVYFPFDQYVLTPEAQQVVTEAANYAKGGNATRVVVVGHADT---SGSQAYNVRLSE 358 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR--IDI 336 RA + L+ SGV++ + + +A+ NRR IDI Sbjct: 359 RRAKAVADALVGSGVNQTSL-SVDWKGETMPAVATGDGVKEPLNRRSTIDI 408 >gi|315127225|ref|YP_004069228.1| component of sodium-driven polar flagellar motor [Pseudoalteromonas sp. SM9913] gi|315015739|gb|ADT69077.1| component of sodium-driven polar flagellar motor [Pseudoalteromonas sp. SM9913] Length = 292 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 10/154 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 + Q+ A KI+ +S + + + + D T M ++ +SS + Sbjct: 141 QDWQNSADKIAVGMSNVNFKQ-AYWAFLQCRDELLPYNFEDISFTIMNYESNSSKLTKSS 199 Query: 249 IVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L KI E L + E ISI +TD+ +N LS RA ++ GV E Sbjct: 200 QQRLDKIAEYLKNDPSIESISIASYTDSY---GGRWNNLDLSRKRAKEIKDYMVGLGVDE 256 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 ++ GF R +D NRR+ I + Sbjct: 257 AKVVT-EGFGEKRFVDTNDNILGRDKNRRLVIQI 289 >gi|146338950|ref|YP_001203998.1| putative outer membrane protein [Bradyrhizobium sp. ORS278] gi|146191756|emb|CAL75761.1| conserved hypothetical protein; putative outer membrane protein [Bradyrhizobium sp. ORS278] Length = 198 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD +S+ ++ +Q++G+ L+ + GHTD N LS RA Sbjct: 88 FDYNSAEISKGSMQAVQELGKALSDPNLKGSTFVVAGHTDGI---GSDGFNQDLSERRAD 144 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + + L++ G+ + + G+ +LK A++P + NRR+ ++ Sbjct: 145 TIKRYLVEKYGLVGQDLVAV-GYGKTKLKDAANPADPLNRRVQVV 188 >gi|260778838|ref|ZP_05887730.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450] gi|260605002|gb|EEX31297.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450] Length = 205 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 7/108 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 +++ +F S P + + + + I I+G+ + + N LS Sbjct: 79 ERQLRILFANDSYDVSPVFSDQISAMADFMDRYRSASIEIQGYASKT---GNSDYNVELS 135 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRI 334 RA + ++L+ G++ +R+ I GF L+ + ++ NRR+ Sbjct: 136 KKRAVAVEELLLSYGINPERV-TIVGFGATHLESTGEEETDHALNRRV 182 >gi|251733445|emb|CAR82472.1| pal [Bradyrhizobium elkanii] Length = 87 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 26/85 (30%), Gaps = 5/85 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + P+ L K + L +I GH D N L RA S Sbjct: 1 SDQTDLSPQATATLDKQAQWLQTYNRYSFTIEGHADER---GTREYNIALGARRAQSVRA 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322 L G+ R+ IS + R Sbjct: 58 YLASRGIDPSRMRTIS-YGKERPVA 81 >gi|294663979|ref|ZP_06729397.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606252|gb|EFF49485.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 144 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 13/116 (11%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + +FD S + VL +G L T + + +RGHTDA + N LS Sbjct: 33 NDRILFDFDKSDIRADAARVLDTLGAALTKVTAKDMQVRGHTDA---KGSDDYNQALSER 89 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-------PMNSANRRIDILVE 339 RA + + + G + + NRR++I + Sbjct: 90 RANAVLA--ALRARGAAQSANAKGDGESQPVAPNTVNGQDNPGGRQLNRRVEIFLR 143 >gi|251733467|emb|CAR82483.1| pal [Agrobacterium vitis] Length = 87 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 5/88 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ + L + + L ++ I++ GH D N L RA S Sbjct: 1 TDSTSIRADAQQTLDRQAQWLQRYSQYPITVEGHADER---GTREYNLALGARRAASTKA 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD 325 L+ G+ +RI IS + R D Sbjct: 58 YLVSRGIPANRIKTIS-YGKERPVATCD 84 >gi|91792753|ref|YP_562404.1| OmpA/MotB [Shewanella denitrificans OS217] gi|91714755|gb|ABE54681.1| OmpA/MotB [Shewanella denitrificans OS217] Length = 178 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 7/106 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 ++N FD S + +L G L + V I GH D N L Sbjct: 72 RQNIIYFDFDRSDLQSDNADILNAHGNYLVENPSVRVLIEGHADER---GTPEYNIALGE 128 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 RA + + L GV ++S +S + + D + NRR Sbjct: 129 RRAKAIAKYLQGMGVQASQMSIVS-YGEEKPLDFSRDDSGFAKNRR 173 >gi|313667783|ref|YP_004048067.1| outer membrane protein class 4 (RmpM) [Neisseria lactamica ST-640] gi|313005245|emb|CBN86678.1| outer membrane protein class 4 (RmpM) [Neisseria lactamica 020-06] Length = 230 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 5/85 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F E L+ + + LA + + + + GHTD F + N LS RA Sbjct: 94 LFGFDKDSLRAEAQDNLKVLAQRLAQTNVQSVRVEGHTD---FMGSEKYNQALSERRANV 150 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 L+ +GV + + +G + Sbjct: 151 VANYLVSNGVPASK-TSAAGLGESQ 174 >gi|261401169|ref|ZP_05987294.1| OmpA family protein [Neisseria lactamica ATCC 23970] gi|269208842|gb|EEZ75297.1| OmpA family protein [Neisseria lactamica ATCC 23970] gi|309379032|emb|CBX22334.1| reduction-modifiable protein of the meningococcus [Neisseria lactamica Y92-1009] Length = 230 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 5/85 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F E L+ + + LA + + + + GHTD F + N LS RA Sbjct: 94 LFGFDKDSLRAEAQDNLKVLAQRLAQTNVQSVRVEGHTD---FMGSEKYNQALSERRANV 150 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 L+ +GV + + +G + Sbjct: 151 VANYLVSNGVPASK-TSAAGLGESQ 174 >gi|261867947|ref|YP_003255869.1| Plp4 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413279|gb|ACX82650.1| Plp4 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 274 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 14/112 (12%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292 +FD + V+ K+ L S + + + G+TD N LS RA Sbjct: 142 DFLFDFDKDTLTVKGREVVDKVAAQLKESKAQEVKVAGYTDRL---GSKVYNMDLSQRRA 198 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSA-------NRRIDI 336 L++ G+ +I+ + G+ ++ +S NRR++I Sbjct: 199 DRVKNRLIEQGID-VQINAV-GYGEAHQVQACNNVKSSQLISCLRPNRRVEI 248 >gi|227114918|ref|ZP_03828574.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 170 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 48/159 (30%), Gaps = 10/159 (6%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + A K + + + + + D + + + N F Sbjct: 18 AVAACSSNKNADNDQSSMGTAGNNGMMDGGNMSSSEQARLQMQELQ---RNNIVYFGLDK 74 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 E +L L + +I GH D N L RA + L Sbjct: 75 YDVSSEFAQMLDAHAAFLRSNPSYKVTIEGHADER---GTPEYNIALGERRANAVQMYLQ 131 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 GVS D+IS +S + + + + NRR ++ Sbjct: 132 GKGVSSDQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 169 >gi|145588462|ref|YP_001155059.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046868|gb|ABP33495.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 167 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + F + +L L + + I I+G+TD A N L Sbjct: 59 EKSVYFGFDEYTVQTKYQKMLSAHASYLKANPKQKIIIQGNTDER---GTAEYNLALGQR 115 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 R+ + + L GVS+D++ +S F + K D + NRR DI+ Sbjct: 116 RSDAVRKSLNLMGVSDDQMEAVS-FGKEKPKAEGDSEAAFAENRRADIV 163 >gi|145219967|ref|YP_001130676.1| OmpA/MotB domain-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145206131|gb|ABP37174.1| OmpA/MotB domain protein [Chlorobium phaeovibrioides DSM 265] Length = 167 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 ++ SS + L++ + + + + GH D + N L R Sbjct: 62 GDVFYEFDSSELSADAEDQLKQNAAWMGANAAAATLVEGHCDER---GTSEYNIALGERR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVE 339 A +A + +++ GV I +S + + + S NRR +++ Sbjct: 119 AGNAKEYMVRLGVPAASIETMS-YGEEKPFAPGHDESAWSKNRRAHFVLK 167 >gi|7339728|gb|AAF60953.1|AF104936_1 outer membrane protein A precursor [Riemerella anatipestifer] Length = 387 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + ++ F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPTVPGLPQYDGCPKPQSAFAAEATGALQGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|71909661|ref|YP_287248.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71849282|gb|AAZ48778.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 180 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 7/116 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 + + FD E ++ + L + + +G+TD N L Sbjct: 65 SQRSIYFDLDKYEVKDEYKDLVAAHAKYLVANKGFKVLLQGNTDER---GSREYNLSLGQ 121 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQG 343 RA + + L GV +D+I +S + K A + NRR DIL + G Sbjct: 122 KRAEAVKRSLTLLGVKDDQIESVS-LGEEKPKDAGHDEAAWSQNRRADILYKAADG 176 >gi|16127077|ref|NP_421641.1| OmpA family protein [Caulobacter crescentus CB15] gi|221235874|ref|YP_002518311.1| outer membrane protein A [Caulobacter crescentus NA1000] gi|13424457|gb|AAK24809.1| OmpA family protein [Caulobacter crescentus CB15] gi|220965047|gb|ACL96403.1| outer membrane protein A [Caulobacter crescentus NA1000] Length = 191 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289 + F S++ +VL + I + GH D N LS Sbjct: 83 REFIVYFPFDSAVLDESGQIVLVAAANYAKSGNATRIVVVGHADT---AGPDAYNIGLSE 139 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 RA + L+ G+S I + +A+ NRR+ I Sbjct: 140 RRAKATADTLVNLGISASTI-AVDWKGESAPAVATGDGVSEPLNRRVTI 187 >gi|257459073|ref|ZP_05624192.1| OmpA family protein [Campylobacter gracilis RM3268] gi|257443458|gb|EEV18582.1| OmpA family protein [Campylobacter gracilis RM3268] Length = 157 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 9/120 (7%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNI 280 + I + T FD + + + + + + G+ D Sbjct: 40 LASQIQSEVGTVYFDFDKFNIRADQQGTINNNAALFNQAGAESLTVKVEGNCDEW---GS 96 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 N+ L L RA +A L+ GV+E RI + + + + NRR + V Sbjct: 97 DEYNYALGLKRATAAKDALVAQGVNESRI-SVVSYGESNMACTEHSKECDAQNRRDEFKV 155 >gi|262275324|ref|ZP_06053134.1| outer membrane protein [Grimontia hollisae CIP 101886] gi|262220569|gb|EEY71884.1| outer membrane protein [Grimontia hollisae CIP 101886] Length = 197 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 14/166 (8%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 + + + + ++ ++ ++ L + + I Sbjct: 21 ADEPPLAEQRSDLFDADSDGVINARDLCDNTPQEAVIDNDGCPTYLLLESNNSLRIQ--- 77 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 F S+I P L K+ L E ++GHT + N LS+ Sbjct: 78 ------FANDSAIVEPAYREALDKMAGFLKLYPETFLELQGHTSS---PGSDDYNQNLSI 128 Query: 290 DRAYSAYQVLMKSGVSEDRISKI-SGFAHHRLKIASDPMNSANRRI 334 RA + L++ GV DR++ I G L ++ NRR+ Sbjct: 129 QRAKAVQAHLIEKGVPIDRLTLIGLGEGDLMLADNTETTQFVNRRV 174 >gi|254487179|ref|ZP_05100384.1| outer membrane protein, OmpA/MotB family [Roseobacter sp. GAI101] gi|214044048|gb|EEB84686.1| outer membrane protein, OmpA/MotB family [Roseobacter sp. GAI101] Length = 632 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 82/272 (30%), Gaps = 21/272 (7%) Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + + + N D + E + LK ++ + F +++ Sbjct: 353 GAVAVGAVLKNGSKVVSNSGDRLVVEDQNGDLRVLKDDDALVRQAGDEVRRETFNDGSAR 412 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + + + G+D + E E+ + + +++ Sbjct: 413 TTVTKPDGSKVVTILGRDGTVLRRINIDPQGNEYVLFDDTQVEQRIVVNELPQVEQTNTL 472 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIID-----------QRNTPMFDKSSSIPLPE 247 +S + + + + L + D + + F+ S+ PE Sbjct: 473 LSQQNEEALRVALETQLRDTQAQRFSLRQVRDIQQVRALAPEVELDALRFETGSAAIQPE 532 Query: 248 TIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 L KIG + VI I GHTDA N LS RA + L + Sbjct: 533 QARALAKIGTAITGAIRNDPRTVILIEGHTDAV---GNEGYNLALSDRRAETVALALTEY 589 Query: 303 -GVSEDRISKISGFAHHRLKIASDPMNSANRR 333 V + G+ LK+ S ANRR Sbjct: 590 FDVPPANLIT-QGYGETALKVPSQTAQPANRR 620 >gi|153829514|ref|ZP_01982181.1| sodium-type flagellar protein MotY [Vibrio cholerae 623-39] gi|148874974|gb|EDL73109.1| sodium-type flagellar protein MotY [Vibrio cholerae 623-39] Length = 294 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 90/298 (30%), Gaps = 19/298 (6%) Query: 51 MWIINATDDDTKKAI-EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 ++ I+ A+ +Y ++ + E K Sbjct: 9 LFAISTLSASVASALEVRYVATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKI 68 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 ++D ++ + + + + + ++ +++ Sbjct: 69 NLDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSE 128 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 E P S + ++ + +SS L + + + IS Sbjct: 129 LEKGRYPTFSYRDWQSRDQRIEVA-----LSSVLFQQPYNEFSDCISKLLPYSFEDISFT 183 Query: 230 DQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWR 286 +D+ S + L +I E + ++ ++ + +TD++ N + Sbjct: 184 ILH----YDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNS---QN 236 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS RA + G+ EDRI ++ G+ R + NRR+ I + Q Sbjct: 237 LSEQRAEVLREYFKSIGLPEDRI-QVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQ 293 >gi|300787647|ref|YP_003767938.1| OmpA-OmpF porin, OOP family [Amycolatopsis mediterranei U32] gi|299797161|gb|ADJ47536.1| OmpA-OmpF porin, OOP family [Amycolatopsis mediterranei U32] Length = 410 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 80/285 (28%), Gaps = 19/285 (6%) Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG-----STNQKKQYQRLE 128 + T+S + + Q EH + V + G + + Sbjct: 129 LDAWTSSLVPQQPDSSLLDALQKVSRQIGTEHGPVSVVAVSNGLDNTAPLDLRVPLAGDA 188 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 D + + S + E+ + + + A Sbjct: 189 TPESVAKMLAGDAEIPGLQGVDVQILELGQTSQGRRQMTEGEQRWIVSVWGEILKAAGVA 248 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 K RL+ + I V + V + + + +FD +S + P Sbjct: 249 KPRLERKSGDILDGAPANVPADAVFAAAPPQPKPPVGTGSVSLSAQALFDPNSPVLAPAA 308 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDAS-PFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 VL+ +L +I GHT P LS+ RA + ++ V + Sbjct: 309 EAVLRPYVTILQGPGAHATITGHTATWGPIPGRDL----LSVQRAEAVRNYFIEQHVPAE 364 Query: 308 RISKISGFAHHRLKIAS--------DPMNSANRRIDI-LVEDRQG 343 ++ G + + NRRI + +V +G Sbjct: 365 ALAPARGVGSSEQVVNDIDPAGNLIEQAAQRNRRIVLDIVTPTKG 409 >gi|26989809|ref|NP_745234.1| OmpA domain-containing protein [Pseudomonas putida KT2440] gi|24984708|gb|AAN68698.1|AE016499_3 OmpA domain protein [Pseudomonas putida KT2440] Length = 831 Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 87/294 (29%), Gaps = 19/294 (6%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 ++ + +T + + +R+++ +S + + ++ + + Sbjct: 540 FATLQNVMLKPTADNLTRTLYLLTTLKVYQRNTRELQPVSGIDSVEAEALPHDNRAQSIA 599 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + LS Q+ L + KS+ + Sbjct: 600 NFGKAALDTYVMLSPGQREHADPAFLKAHLPDYWYPAIARQTGKSMAAAGSEAGGNQDYL 659 Query: 182 KILAM----KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + R D+ + + + + N + + ++ R I++ Sbjct: 660 YASRQITFYSDQIREPDVPRILDNAFLMSSSRNYIDSLRAQSLRAIETITLESDTLFAFG 719 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 E L I L ++ + I I GH D ++ N ++S RA + Sbjct: 720 RADFQSLKNEGQHQLSAIASKLLNTPNIGKIIISGHADQL---GDSQGNLQVSKQRAQTI 776 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340 L+ GV + + G + + D NRR++I V Sbjct: 777 RTYLVGKGVPAE-LVVAQGEGSRKPLVNCDMQQPRTQLIKCLEPNRRVEIEVRG 829 >gi|156974662|ref|YP_001445569.1| hypothetical protein VIBHAR_02380 [Vibrio harveyi ATCC BAA-1116] gi|156526256|gb|ABU71342.1| hypothetical protein VIBHAR_02380 [Vibrio harveyi ATCC BAA-1116] Length = 204 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 7/165 (4%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + ++ LQD L + + S +F S Sbjct: 29 ETPKAEQIADLQDDDNDGVINARDLCPGTPATSEIDNDGCGEYIKSSEKMEVRVLFANDS 88 Query: 242 SIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 +P ++++ E L I ++G+ A N LS RA + L+ Sbjct: 89 DEIVPVFRRQIRELSEFLKGYPSTSIELQGYASKI---GGAEHNLDLSKRRANNVRAALL 145 Query: 301 KSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVEDRQG 343 G+ DR+ +I GF L + ++ NRR+ V +G Sbjct: 146 GYGIESDRV-RIVGFGDTHLAEQGTDEVSHALNRRVTASVIGYKG 189 >gi|194366090|ref|YP_002028700.1| OmpA/MotB domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194348894|gb|ACF52017.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3] Length = 278 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 14/113 (12%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDR 291 +F S++ E +Q + + + I + G+TD A N LS R Sbjct: 163 DALFGFDSAVLSAEGQQAVQGVLAQVREASQVQSIRVTGYTDRI---GSASYNQALSQRR 219 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI 336 A + L++ GV IS G + + N NRR+ I Sbjct: 220 AEAVRSALVQGGVPAASISA-EGRGAAEPIVQCEQRNRRELIACLAPNRRVQI 271 >gi|149202387|ref|ZP_01879360.1| OmpA domain protein [Roseovarius sp. TM1035] gi|149144485|gb|EDM32516.1| OmpA domain protein [Roseovarius sp. TM1035] Length = 311 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + L + E L A +++ GH+D+ N LS RA + Sbjct: 204 FGLGDNALGAGPYRSLVTLAEFLTASPETRVALVGHSDSI---GGLEQNSALSRARAEAV 260 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 +L++ GV+ ++ G + ++ NRR+++++ D + Sbjct: 261 LNLLVEQHGVAPAQVEA-HGIGYLSPIASNTSPEGRERNRRVEVVLLDAE 309 >gi|203287626|ref|YP_002222641.1| outer membrane protein [Borrelia recurrentis A1] gi|201084846|gb|ACH94420.1| outer membrane protein [Borrelia recurrentis A1] Length = 385 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 10/147 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I + + + + + E + GI +S+ + F S + + L+ I Sbjct: 246 DNTIENEIKEYIKREQIDSIEIEKNKNGIKLSLDIE-----FYPDSFQIIRKEHNKLKHI 300 Query: 256 GEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 +L I I GHT ++ LS RA++ L+K V G Sbjct: 301 ANLLEKFQDNNILIEGHTAKF---GTEQEMQELSEKRAHTIGNYLLKMKVKNKNQIFFKG 357 Query: 315 FAHHRLK-IASDPMNSANRRIDILVED 340 + + K ++S P+ S NRR++I + + Sbjct: 358 WGAKKPKYVSSSPLASKNRRVEITILN 384 >gi|203284088|ref|YP_002221828.1| outer membrane protein [Borrelia duttonii Ly] gi|201083531|gb|ACH93122.1| outer membrane protein [Borrelia duttonii Ly] Length = 385 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 10/147 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I + + + + + E + GI +S+ + F S + + L+ I Sbjct: 246 DNTIENEIKEYIKREQIDSIEIEKNKNGIKLSLDIE-----FYPDSFQIIRKEHNKLKHI 300 Query: 256 GEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 +L I I GHT ++ LS RA++ L+K V G Sbjct: 301 ANLLEKFQDNNILIEGHTAKF---GTEQEMQELSEKRAHTIGNYLLKMKVKNKNQIFFKG 357 Query: 315 FAHHRLK-IASDPMNSANRRIDILVED 340 + + K ++S P+ S NRR++I + + Sbjct: 358 WGAKKPKYVSSSPLASKNRRVEITILN 384 >gi|332305765|ref|YP_004433616.1| peptidoglycan-associated lipoprotein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173094|gb|AEE22348.1| peptidoglycan-associated lipoprotein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 185 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 8/162 (4%) Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 S+E++ A + + + + + A N+ + E +++D + Sbjct: 23 SSGPSEEELAAERNRVAAAQAEADRKAEEAKVQAGNMKPMLSPEEVMQKEKSALMDDQ-V 81 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAY 293 FD S + +L + L + + GH D+ N L RA Sbjct: 82 VYFDFDRSSVGSKYYALLDQHAAFLVKNPGQSVVIEGHCDSR---GTPEYNIALGERRAK 138 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 S LM +GVS ++S +S + + S + NRR Sbjct: 139 SVETYLMNAGVSASQVSVVS-YGEEKPIDTSGTTAAFAENRR 179 >gi|330957696|gb|EGH57956.1| ompA family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 388 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 80/279 (28%), Gaps = 26/279 (9%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENN 130 ++ A+ G + + SS + K +T Sbjct: 20 QTPQSDSAATGGHWWQFGSSNESSDAGAAAQAPAPGPAPAPVAKAAATPAPAAGSESSAP 79 Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKS--------TDLEKSINKEENYFLPPLSKEK 182 ++ S + K K S T + P + Sbjct: 80 WYWPFGSNDNAQAKPDAVASKPADKPAAPSLVAKSETDTKWWWPFGANDGKTDEPKALPM 139 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + L + ++ + + E + I+ F+ Sbjct: 140 PDPKVTQAWLDEYEPRLRAAIKDSPFQ-------LERREDLLAIT---APVDSSFNPDRP 189 Query: 243 IPL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 L P T+ + ++ + + + I GH D N ++S +RA S + Sbjct: 190 AMLLPNTLGPITRLAKAVEGDQKTAVLILGHADT---SGPTDANQKISQERAQSVAAIFR 246 Query: 301 KSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 SG+ +R+ + G + A+D + NRR++IL Sbjct: 247 LSGLERNRL-SLRGMGAVMPRAANDSLQGRALNRRVEIL 284 >gi|116693955|ref|YP_839488.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia HI2424] gi|116651955|gb|ABK12595.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424] Length = 103 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 6/104 (5%) Query: 242 SIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQV 298 P ++ IG +A S + + G+TD P +N LS RA ++ Sbjct: 1 MTVEPWWASMMATIGRTIAASVPGAYVQVVGYTDNVPAGAISRGNNQALSEARAREVARI 60 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 +GV IS +G + S NRR+++ V + Sbjct: 61 FAAAGVPMQNISA-TGQGDADPLADNGTAPGRSRNRRVEVTVSN 103 >gi|33151319|ref|NP_872672.1| major outer membrane protein homolog, OmpA2 [Haemophilus ducreyi 35000HP] gi|1872471|gb|AAB49274.1| OmpA2 [Haemophilus ducreyi] gi|33147539|gb|AAP95061.1| major outer membrane protein-like protein, OmpA2 [Haemophilus ducreyi 35000HP] Length = 407 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + + E VL + + T I + G+TD N +LS Sbjct: 284 SDVLFDFAKADLKQEAAQVLDATNAEIVNLGLATPAIQVNGYTDRI---GKEEANLKLSQ 340 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA L+ G + I+ + G+ + + +RR+++ V Sbjct: 341 RRAEMVANYLVAKGQNPVSINAV-GYGEANPITGNTCDAVKGRKQLIACLAPDRRVEVQV 399 Query: 339 EDRQ 342 + + Sbjct: 400 QGTK 403 >gi|50235083|gb|AAT70744.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 74/268 (27%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + + + + Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDETCSETPGLPEFQGWPKPEGDGVPEKKKDCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + ++ C T K LEK++ + L Sbjct: 171 EGAGPVETHGCPWPKT---------NKDGVLEKAVVCVNVAAPAENTGCPWPDTDNDGVL 221 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 K + + + + F+ + + E+ L Sbjct: 222 DKDDKC-------PTCPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|251733447|emb|CAR82473.1| pal [Bradyrhizobium japonicum] Length = 87 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 5/85 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + P+ IV L+K + L + + +I GH D N L RA S Sbjct: 1 SDQTDLTPQAIVTLEKQAQWLQNYRQYSFTIEGHADER---GTREYNIALGARRAQSVRS 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322 L G+ +R+ IS + R Sbjct: 58 FLASRGIDPNRMRTIS-YGKERPVA 81 >gi|13472828|ref|NP_104395.1| hypothetical protein mll3244 [Mesorhizobium loti MAFF303099] gi|14023575|dbj|BAB50181.1| mll3244 [Mesorhizobium loti MAFF303099] Length = 967 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 82/294 (27%), Gaps = 32/294 (10%) Query: 56 ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 D + + S+ + ++ D I + D + Sbjct: 692 EFDISKVRDVSPEARAAEHWQYYVSRLEAQPGIIVAQQTERGGDFYISGLRDPLAADPQA 751 Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 + + + + S + ++ I Sbjct: 752 --LLHGTEVDPARVHSQWQFYQSLDPKFVVKRLQASLTPPKSVLLSIIQGRIVVVGEAPA 809 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 +++ + A + L L+ +++ + + Q Sbjct: 810 NWINRARAAAEQLSADGVVLDVSQLQELNLAELNDLREAI---------------QATDI 854 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEV---------ISIRGHTDASPFRNIARDNWR 286 F +P PE VL ++ + + E + GH+DA+ N Sbjct: 855 FFYSGKVVPGPEQTPVLDRLADQIKEFAENARKSGVTARFMLTGHSDAT---GRETANAS 911 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 +S RA + +L K GV+ + + + G + + +S NRR+ I V Sbjct: 912 ISAARAETVRALLNKRGVAPE-LLLVRGAGTFEPLVPENSQTGSSTNRRVSITV 964 >gi|307295611|ref|ZP_07575447.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1] gi|306878650|gb|EFN09870.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1] Length = 234 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 7/105 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYS 294 FD + PLPE + + + + A + G+TD R N LSL RA + Sbjct: 130 FFDWNMDAPLPEGVGTISTLTQTAAQCGWTRFGVTGYTDT---SGSNRYNDGLSLRRARN 186 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 ++ + G++ D + ++G +LKI + NRR++I Sbjct: 187 VASLMSQGGIATDAM-TVTGLGETQLKIETADGVREPMNRRVEIT 230 >gi|170721680|ref|YP_001749368.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619] gi|169759683|gb|ACA72999.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 831 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 90/294 (30%), Gaps = 19/294 (6%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 ++ + +T + + +R+++ ++ + + ++ + + Sbjct: 540 FATLQNVMLKPTADNLTRTLYLLTTLKVYQRNTRELQPVTGVDSVEAEALPHDNRAQSIA 599 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + LS +Q+ + L + K ++ Sbjct: 600 DFGKAALDTYVMLSPAQREKADPALLKARLPDYWYPAIARHTGKRMDAAGGESPANQDYL 659 Query: 182 KILAM----KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + R D+ + + + + N + +L ++ R+ I++ Sbjct: 660 YASRQIVFYSDQIREPDVPRILDNAFLMSSSRNYINSLLTQSLRSIETITLESDTLFAFA 719 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 E L I L ++ + I I GH D A+ N ++S RA + Sbjct: 720 RADFQSLKSEGQNQLSAIASKLLNTPNIGKIIISGHADQL---GDAQGNLQVSRQRAQTI 776 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340 L+ GV + + G + + D NRR++I V Sbjct: 777 RTYLVGKGVPAE-LVSAQGEGSRKPLVNCDMQQPRAQLIKCLEPNRRVEIEVRG 829 >gi|124262903|ref|YP_001023373.1| outer membrane protein [Methylibium petroleiphilum PM1] gi|124262149|gb|ABM97138.1| outer membrane protein [Methylibium petroleiphilum PM1] Length = 217 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + GH D+ N RLS RA + +V + +G+S DR+ +I G L +D Sbjct: 146 RLTGHADSQ---GSDLYNLRLSERRARAVSKVFLGAGISADRL-EIEGRGERDLIDLAD- 200 Query: 327 MNSANRRIDILVEDRQ 342 + NRR++I + + Sbjct: 201 -GAKNRRVEIRLVGGE 215 >gi|330447940|ref|ZP_08311588.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492131|dbj|GAA06085.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 298 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 9/114 (7%) Query: 228 IIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDN 284 D R+ + F+ + L + L H + + GHTD + N Sbjct: 175 YRDARDVVLQFNLGQRVVSSSQKQTLVDLASYLKHDKNIKRVLIDGHTDNV---GSSVAN 231 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++S RA +L ++GV + +I ++ + NRR+ I Sbjct: 232 LQISKVRADDVASILRENGVRSS-LMEIRSHGSRYPVANNNTQQGKAKNRRVTI 284 >gi|150024643|ref|YP_001295469.1| OmpA family outer membrane protein [Flavobacterium psychrophilum JIP02/86] gi|149771184|emb|CAL42651.1| Probable outer membrane protein, OmpA family [Flavobacterium psychrophilum JIP02/86] Length = 284 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 11/107 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++ ++ L ++ V+ E+I I GH D LS RA + Sbjct: 181 FITNTFAVTNDSRGKLYELLLVMQQRPEMIISIHGHLCCVSV-----DRKDLSTQRAKAV 235 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNSANRRIDILV 338 Q L +G+ + R+ GF ++ +ANRR++I V Sbjct: 236 KQFLELNGIEKTRMD-FKGFGSSIPLFPLPENTEEERAANRRVEIEV 281 >gi|149374319|ref|ZP_01892093.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter algicola DG893] gi|149361022|gb|EDM49472.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter algicola DG893] Length = 310 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 11/113 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLS 288 +R+ F S+ L I + + E + + GHTD+ DN LS Sbjct: 186 KRSRISFASGSTSLSDADRRFLDNIVMYIQADSTVERVFVDGHTDS---SGSRIDNRALS 242 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-NRRIDILVED 340 +RA + L+ G+ D + A A NRR I ++ Sbjct: 243 EERANAVADYLIGQGIEAD-LVTTRAHADQYPV----SRRPADNRRTTIRLQR 290 >gi|325336487|gb|ADZ12761.1| OmpA3 [Riemerella anatipestifer RA-GD] Length = 473 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 15/119 (12%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARD 283 + F +S + P++ L ++ + + + G TD A Sbjct: 354 EVNRDFEGIEFALNSDVIRPQSFGKLDNAANIIKGMGLSKQYLVVVGATDTR---GSASY 410 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRI 334 N LS RA S + L+ GVS + K G + LK + N ANRR+ Sbjct: 411 NLNLSKRRANSVVKYLVNKGVSAS-VLKAEGRGKNDLKYPECNPATKCPEWKNEANRRV 468 >gi|315022385|gb|EFT35413.1| Thrombospondin type 3 repeat:OmpA/MotB [Riemerella anatipestifer RA-YM] Length = 145 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 15/119 (12%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARD 283 + F +S + P++ L ++ + + + G TD A Sbjct: 26 EVNRDFEGIEFALNSDVIRPQSFGKLDNAANIIKGMGLSKQYLVVVGATDTR---GSASY 82 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRI 334 N LS RA S + L+ GVS + K G + LK + N ANRR+ Sbjct: 83 NLNLSKRRANSVVKYLVNKGVSAS-VLKAEGRGKNDLKYPECNPATKCPEWKNEANRRV 140 >gi|313206072|ref|YP_004045249.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868] gi|312445388|gb|ADQ81743.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868] Length = 473 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 15/119 (12%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARD 283 + F +S + P++ L ++ + + + G TD A Sbjct: 354 EVNRDFEGIEFALNSDVIRPQSFGKLDNAANIIKGMGLSKQYLVVVGATDTR---GSASY 410 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRI 334 N LS RA S + L+ GVS + K G + LK + N ANRR+ Sbjct: 411 NLNLSKRRANSVVKYLVNKGVSAS-VLKAEGRGKNDLKYPECNPATKCPEWKNEANRRV 468 >gi|70728662|ref|YP_258411.1| OmpA family protein [Pseudomonas fluorescens Pf-5] gi|68342961|gb|AAY90567.1| OmpA family protein [Pseudomonas fluorescens Pf-5] Length = 418 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 78/224 (34%), Gaps = 23/224 (10%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + ++ + + DSE K ++K +P + Sbjct: 139 SSKDSSDKPVAEAKKAEPAPAPAVTAAADSETHWWWPFPKSQPKPLSKVNVADIPMPDPK 198 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 A L D ++ + + E ++++ + F+ Sbjct: 199 ITQA-----WLDDYEPRLREAVKDSK-------LQIERRENVLVVTALVD---ASFNPDR 243 Query: 242 SIPL-PETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 L P T+ ++ + + + I GH DA+ N +LS DRA S + Sbjct: 244 PAMLLPVTLGPFTRVAKAVEGDPKTAVLILGHADAT---GPTLANQKLSRDRAQSVAAIF 300 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 SG+ +DR+ + G + A+D S NRR++I++ R Sbjct: 301 SLSGLKQDRLM-LRGMGSVMPRAANDSPQGRSLNRRVEIMLTQR 343 >gi|332883506|gb|EGK03789.1| hypothetical protein HMPREF9456_01856 [Dysgonomonas mossii DSM 22836] Length = 660 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 5/90 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ + LPE+ L + ++L + I + H D + N +LS R Sbjct: 521 ENIFYEFDKATLLPESKKELDGLIDLLNTNPNVTIELSAHADR---KGSDDYNIKLSQRR 577 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 A S L+ G+S+DR++ + G K Sbjct: 578 AESVVNYLIAGGISKDRLTAV-GKGKSEPK 606 >gi|86159756|ref|YP_466541.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85776267|gb|ABC83104.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter dehalogenans 2CP-C] Length = 242 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S ++ LQK+ + L + ++G+ D A+ N L RA +A Sbjct: 141 FAFDRSNLTADSQQNLQKLADCLKQAPAKRVLVQGNCDER---GTAQYNVALGNRRAEAA 197 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 + L GV + +S + + + + NRR D +E Sbjct: 198 KKYLTDLGVGST-VDTVS-YGEEKPVCSEATEACWAKNRRDDFQIER 242 >gi|127512720|ref|YP_001093917.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4] gi|126638015|gb|ABO23658.1| OmpA/MotB domain protein [Shewanella loihica PV-4] Length = 251 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 57/224 (25%), Gaps = 11/224 (4%) Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 Q + NN + L I + + Sbjct: 25 ATQATQSTNNSSADEEALIGVGSGIVLGAVVAGPVGAIIGAFTGGMIGQTVANDSEIKQQ 84 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + LA + + + + + + G + + F Sbjct: 85 QATLAEQESRMMALKQQNEALLTVQQEYQEAKVELAQLRQHQGTRLEELALGLNVQFKTG 144 Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 SS P L ++ + +A S + + + G+ D + N LS R L Sbjct: 145 SSTVEPHFQSQLNEVADAMAISPQLKLDLTGYADRR---GDSSYNQALSEQRVAEVRSYL 201 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSAN----RRIDILVE 339 + GV E R+ + N RR+ I + Sbjct: 202 VSKGVDEARLDA-KAYGASAPVKDEQSFE--NDFFDRRVTIKLL 242 >gi|308186600|ref|YP_003930731.1| type VI secretion system, core protein [Pantoea vagans C9-1] gi|308057110|gb|ADO09282.1| Putative type VI secretion system, core protein [Pantoea vagans C9-1] Length = 405 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 57/152 (37%), Gaps = 14/152 (9%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + L DL ++++ ++ + V + ++I +F + ++ P Sbjct: 251 QALLDLRQRLNDVIAAGQLE-----VSDGAFGSKVII-----PADKLFAEQGTVINPVGR 300 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L ++ + I + TD P + ++ S RA + Q+L + + Sbjct: 301 ALLARVSTAMKDVKGTILVSVFTDDHPVDNSRFASSYEFSFARARAITQLLQLQ-LEDGH 359 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + G + +D + NRR++I + Sbjct: 360 TVRSEGRGDSDPLLPNDSSENRTRNRRVEITL 391 >gi|322380701|ref|ZP_08054840.1| flagellar motor protein MotB [Helicobacter suis HS5] gi|321146869|gb|EFX41630.1| flagellar motor protein MotB [Helicobacter suis HS5] Length = 258 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 74/202 (36%), Gaps = 14/202 (6%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 +L ++ K D D + + + + + K + I+ Sbjct: 48 KALKKEFLKIFDYAPRPDSMQPVITIPPAPGDTQTSMETESSKANENSNRSQVSITKIGQ 107 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 G + + I +GV+ + + + + D + E I + KI L Sbjct: 108 GAILEQIAQGVVLKLPSSLLFENSYDDTINA--------TMREYIHRIAKIIHALPDQI- 158 Query: 265 VISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I +RG TD +P + +D++ L+ RAY +VL+ G+ ++ + + + Sbjct: 159 RIDVRGFTDNTPLPSNSRFKDHYALAASRAYKVMKVLLSDGIDPQKL-SFTSYGKNDPIA 217 Query: 323 ASDPMNSA--NRRIDILVEDRQ 342 ++ + N R++I Q Sbjct: 218 PNNSLEERLHNNRVEIFFHADQ 239 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K A W + YADF+++L+A F+ ++ I+ + KA+++ F Sbjct: 5 KKAKPVECPAGERWAVPYADFLSLLLALFIALYAISVVNKSKVKALKKEFLKIFDYAPRP 64 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 PP + +NS ++ T + Sbjct: 65 DSMQPVITIPPAPGDTQTSMETESSKANENSNRSQVSITKIGQG 108 >gi|315453529|ref|YP_004073799.1| putative flagellar motor protein [Helicobacter felis ATCC 49179] gi|315132581|emb|CBY83209.1| putative flagellar motor protein [Helicobacter felis ATCC 49179] Length = 253 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 1/116 (0%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+ + KA+++ F Sbjct: 3 KKAKKVECPAG-ERWAVPYADFLSLLLALFIALYAISVVNKAKVKALKKEFLKIFDYAPI 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 PP + + + E +++ + + L Sbjct: 62 PDSFQPVIPIPPAPGGRQEDTIEERESTQQSNPSQTTIKKIGEGSVLEQTDQGSVL 117 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 64/179 (35%), Gaps = 9/179 (5%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + F P + +++ +++ S S I +G + E T G Sbjct: 56 FDYAPIPDSFQPVIPIPPAPGGRQEDTIEERESTQQSNPSQTTIKKIGEGSVLEQTDQGS 115 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRN--I 280 ++ + + + +I ++ + +RG+TD +P Sbjct: 116 VLKLPSSLIFT--EPYGDTINATMQEYIGRIASIIRALPSQVQINVRGYTDNTPIPAHIP 173 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 +D++ L+ RA + L+ G++ ++ + + + + +D N R++I Sbjct: 174 FKDHYALAASRASKVMRELIADGINPQKL-SFTSYGANNPIVPNDSIENRMRNNRVEIF 231 >gi|332882569|ref|ZP_08450181.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679369|gb|EGJ52354.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 399 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 62/202 (30%), Gaps = 13/202 (6%) Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 D + D E + + +A K+ K I + Sbjct: 202 GKEDKHADWAANSAKDNEDVAKRVAALEDNVSDLKGKVANKQDKMNDANGNGIPDEIENY 261 Query: 207 VADN-------IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + +N + + + I + FD +SS P + + + + L Sbjct: 262 LNNNYQAKGGSAANNNNSDFSGDVVSDLIKKGYISAYFDFNSSTPQVSSTWAIDIVVKYL 321 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I I G+ D N LS RA + +L+K+GVS RIS G Sbjct: 322 KENSGANILISGYADEL---GGTNYNSSLSQKRANAVKDILVKAGVSASRIST-EGKGED 377 Query: 319 RLKIASDP-MNSANRRIDILVE 339 S RR ++ Sbjct: 378 TSVDKSSSRARQIARRATFSLK 399 >gi|51598427|ref|YP_072615.1| outer membrane protein [Borrelia garinii PBi] gi|51572998|gb|AAU07023.1| outer membrane protein [Borrelia garinii PBi] Length = 389 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 57/147 (38%), Gaps = 10/147 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I + + + + +K + E GI +S + F S L + L I Sbjct: 250 DNFIETEVENYIQEKKIKDIGVEKNNKGINLSFDIE-----FYPDSFQILQKEYKKLDLI 304 Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++L I I GHT+ + + + LS RA + L+K V G Sbjct: 305 AKLLEKFKKNNILIEGHTEQF---GLEEEMYELSEKRARTIGNYLIKMKVKNKDQILFKG 361 Query: 315 FAHHRLKIA-SDPMNSANRRIDILVED 340 + + K S P+ + NRR++I + + Sbjct: 362 WGSQKPKYPKSSPLKAKNRRVEITILN 388 >gi|322379332|ref|ZP_08053708.1| flagellar motor protein MotB [Helicobacter suis HS1] gi|321148245|gb|EFX42769.1| flagellar motor protein MotB [Helicobacter suis HS1] Length = 258 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 74/202 (36%), Gaps = 14/202 (6%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 +L ++ K D D + + + + + K + I+ Sbjct: 48 KALKKEFLKIFDYAPRPDSMQPVITIPPAPGDTQTSMETESSKANENSNRSQVSITKIGQ 107 Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE 264 G + + I +GV+ + + + + D + E I + KI L Sbjct: 108 GAILEQIAQGVVLKLPSSLLFENSYDDTINA--------TMREYIHRIAKIIHALPDQI- 158 Query: 265 VISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 I +RG TD +P + RD++ L+ RAY +VL+ G+ ++ + + + Sbjct: 159 RIDVRGFTDNTPLPSNSRFRDHYALAASRAYKVMKVLLSDGIDPQKL-SFTSYGKNDPIA 217 Query: 323 ASDPMNSA--NRRIDILVEDRQ 342 ++ + N R++I Q Sbjct: 218 PNNSLEERLHNNRVEIFFHADQ 239 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K A W + YADF+++L+A F+ ++ I+ + KA+++ F Sbjct: 5 KKAKPVECPAGERWAVPYADFLSLLLALFIALYAISVVNKSKVKALKKEFLKIFDYAPRP 64 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 PP + +NS ++ T + Sbjct: 65 DSMQPVITIPPAPGDTQTSMETESSKANENSNRSQVSITKIGQG 108 >gi|119952965|ref|YP_945174.1| outer membrane protein [Borrelia turicatae 91E135] gi|119861736|gb|AAX17504.1| outer membrane protein [Borrelia turicatae 91E135] Length = 385 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 10/147 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I + ++ + + E GI +S+ + F S + + L+ I Sbjct: 246 DNIIEHEVKEYISTKQIDSINIEKNENGIKLSLDIE-----FYPDSFQIIKKEYNKLKHI 300 Query: 256 GEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 +L I I GHT ++ LS RA+S L+K V G Sbjct: 301 ANLLEKFKDNNILIEGHTAKF---GTEQEMQELSEKRAHSIGNYLLKMKVKNKNQIFFKG 357 Query: 315 FAHHRLKIAS-DPMNSANRRIDILVED 340 + + K A+ P+ S NRR++I + + Sbjct: 358 WGAKKPKYANSSPLASKNRRVEITILN 384 >gi|269962097|ref|ZP_06176451.1| sodium-type flagellar protein MotY [Vibrio harveyi 1DA3] gi|269833181|gb|EEZ87286.1| sodium-type flagellar protein MotY [Vibrio harveyi 1DA3] Length = 293 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 10/158 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 + Q ++I LS ++ + S D T + +++ + Sbjct: 140 QDWQSRDQRIEVALSSVLFQ-SKYNAFSNCIANLLKYSFEDIAFTILHYERQGDQLTKAS 198 Query: 249 IVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L +I + + H+ ++ + +TD++ ++ ++ LS RA S G+S Sbjct: 199 KKRLSQIADYVRHNQDIDLVLVATYTDSTDGKSASQS---LSERRAESLRTYFESLGLSG 255 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 DRI ++ G+ R + NRR+ I + Q Sbjct: 256 DRI-QVQGYGKRRPIADNGSPIGKDKNRRVVISLGRTQ 292 >gi|322435990|ref|YP_004218202.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] gi|321163717|gb|ADW69422.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9] Length = 260 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 23/212 (10%), Positives = 60/212 (28%), Gaps = 26/212 (12%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + ++ + + + K ++ + + A + + Sbjct: 54 VQNTNELDAKTASDHRALVDTDERATKGIAGAQAAADQAGQHATAAGQSADQANQAAQGA 113 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + ++ ++ L + V F ++ L Sbjct: 114 SNRVDSLNGVIANLDNYKQLSDVSVT------------------FGFDKTVLTKSDKEQL 155 Query: 253 QKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRIS 310 + L + + + G TD+ A+ N++LS RA + L K V + Sbjct: 156 DGLAASLQSARGYLLEVTGGTDSV---GDAQYNYKLSQRRADAVVDYLSAKYNVPPHKFY 212 Query: 311 KISGFAHHRLKIASDPM--NSANRRIDILVED 340 + G + + NRR+++ + Sbjct: 213 LV-GIGKDAQIASDKTASGRAQNRRVEVKLMS 243 >gi|160890582|ref|ZP_02071585.1| hypothetical protein BACUNI_03025 [Bacteroides uniformis ATCC 8492] gi|156859581|gb|EDO53012.1| hypothetical protein BACUNI_03025 [Bacteroides uniformis ATCC 8492] Length = 392 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 76/266 (28%), Gaps = 7/266 (2%) Query: 55 NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 DD K Y N G + + + + TK + Sbjct: 111 TQVDDGYYKQRFDYMNLHGDVMFNLNALFGGYNQHRVYEIIPYVGAGFTHNYTKPHREAL 170 Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD--LCKSTDLEKSINKEEN 172 + +++ L S K + G D L + L Sbjct: 171 SVNAGIINRFRISNAIDINLELSAMGVEDKFDGEVGGDHGYDGVLSATVGLTYRFPARGF 230 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P ++ + +L ++ + LVA T I+ Sbjct: 231 RRPMPQLISQVELAAMQAQLAEMGAANQQLQNALVAAQNQPVAEVTETEV-IVPDPDIAP 289 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T F+ S+ P + L + + + ++ G+ D+ N LSL R Sbjct: 290 RTVFFNIGSAEVSPREAMNLSYLADQMKQFPNATYTVNGYADS--ATGTPAFNKELSLKR 347 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFA 316 A + VL+K G+ DR+ +G Sbjct: 348 AQAVVDVLVKQYGIPADRLKVDAGGG 373 >gi|124005287|ref|ZP_01690128.1| OmpA family protein [Microscilla marina ATCC 23134] gi|123989109|gb|EAY28687.1| OmpA family protein [Microscilla marina ATCC 23134] Length = 436 Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 3/109 (2%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + ++ F S + L + L + T + N +L+ Sbjct: 28 RTSSVYFAYKQSELSAKAKQKLDQTFARLYRKQVLDYEVTLTGLADSVGNVAANHQLANK 87 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 RA + L+ GV D++ + R ++ + NRR++I++ Sbjct: 88 RALAVKTYLIAQGVGADKV-TVKVLGE-RP-ANNEDEHRRNRRVEIVLR 133 >gi|331015715|gb|EGH95771.1| ompA family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 320 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 68/212 (32%), Gaps = 11/212 (5%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 ++ S + K K + + + + + ++ Sbjct: 19 PWYWPFGSNDNAQAKPDAVASKPADKPAAPAMVAKSETDTKWWWPFGAEGQKDEPKALPM 78 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248 + + L A E + I+ F+ L P T Sbjct: 79 PDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNT 135 Query: 249 IVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + + ++ +V+ + I GH D N ++S +RA S + SG+ + Sbjct: 136 LGPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERN 192 Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDIL 337 R+S+ G + A+D + NRR++IL Sbjct: 193 RLSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 223 >gi|157737823|ref|YP_001490507.1| OmpA/MotB precursor [Arcobacter butzleri RM4018] gi|315637613|ref|ZP_07892819.1| lipoprotein [Arcobacter butzleri JV22] gi|157699677|gb|ABV67837.1| OmpA/MotB precursor [Arcobacter butzleri RM4018] gi|315478067|gb|EFU68794.1| lipoprotein [Arcobacter butzleri JV22] Length = 174 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 48/160 (30%), Gaps = 15/160 (9%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 EK + D A + G + + G + +LI F Sbjct: 21 SEKNADVDNVVGANDAASVEAPIQDGTLLEKASNGNYYMINGQRVLIE------HVYFGF 74 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + L+ + +++ G+TD N+ L L RA + Sbjct: 75 DKYNLTADNKSKAVSNASKLSAVSSDTTVKVLGNTDEW---GSDEYNYALGLKRANAVKD 131 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 VL+ +GV+ + + + NRR++ Sbjct: 132 VLVANGVTTN--ISLVSLGESNPVCTEKTKDCWAQNRRVE 169 >gi|78065362|ref|YP_368131.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383] gi|77966107|gb|ABB07487.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 170 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 68 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 124 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + A + + NRR D++ Sbjct: 125 RRAMALLGVNDSQMEAVS-LGKEKPQAAGHDEASWAQNRRADLV 167 >gi|317491198|ref|ZP_07949634.1| peptidoglycan-associated lipoprotein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920745|gb|EFV42068.1| peptidoglycan-associated lipoprotein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 171 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277 + + + + + N F + +L L ++ ++ GH D Sbjct: 53 EEQARLQMQELQKNNIVYFGLDKYDVSSDYAQMLDAHAAFLRNNPSYKVTVEGHADER-- 110 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA + L GV D+IS +S + + + + NRR Sbjct: 111 -GTPEYNIALGERRANAVKMYLQGKGVGADQISIVS-YGKEKPAVLGHDEAAYAKNRRAV 168 Query: 336 IL 337 ++ Sbjct: 169 LV 170 >gi|126726180|ref|ZP_01742022.1| OmpA/MotB family protein [Rhodobacterales bacterium HTCC2150] gi|126705384|gb|EBA04475.1| OmpA/MotB family protein [Rhodobacterales bacterium HTCC2150] Length = 305 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 8/106 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 +F S+ L+ + +L + E +I GHTDA N +S R Sbjct: 196 EDLLFQPGSADLTAGDYASLENLAALLKENPEKKAILVGHTDAV---GALEVNIAISEKR 252 Query: 292 AYSAY-QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI 334 A S +++ + +S DR+S G + ++D NRR+ Sbjct: 253 AISVMTRMVEQYEISADRLSA-KGVGFLAPRASNDTDEGRQKNRRV 297 >gi|56476929|ref|YP_158518.1| outer membrane protein, porin-associated lipoprotein [Aromatoleum aromaticum EbN1] gi|56312972|emb|CAI07617.1| Outer membrane protein, porin-associated lipoprotein [Aromatoleum aromaticum EbN1] Length = 175 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + + FD + PE +++ L + ++ I+G+TD N L Sbjct: 65 SKRSVFFDFDQFVIKPEARPLVEAHARFLVQNPQMKMLIQGNTDEL---GSREYNLALGQ 121 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 RA + Q L G E +I +S + + + + NRR Sbjct: 122 KRADAVRQALTLLGAKESQIESVS-LGEEKPRCGESSESCFAQNRR 166 >gi|307609455|emb|CBW98949.1| hypothetical protein LPW_07341 [Legionella pneumophila 130b] Length = 240 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 9/145 (6%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L I + ++ K + II MF S L Sbjct: 84 LVASIYRDSKRKIIRDLQKQDIQYVEYGDTRTLIIPTDKYFMFS--SPRLNEICYPGLNN 141 Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + I + G TD +LS +A + L +G++ R+ Sbjct: 142 VIRLLNFYPQSTIYVAGFTDNV---GSRSHKRKLSQAQAETMMTFLWANGIAAKRLKA-E 197 Query: 314 GFAHHRLKIASDP--MNSANRRIDI 336 G+ + ++ NRRI+I Sbjct: 198 GYGDKNAISDNAIIHGSAQNRRIEI 222 >gi|290473839|ref|YP_003466713.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus bovienii SS-2004] gi|289173146|emb|CBJ79919.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus bovienii SS-2004] Length = 373 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 18/140 (12%) Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTD 273 T + R+ +F+ + S E L + LA + + + GHTD Sbjct: 228 IPTPAPTVENKSFTLRSDVLFNFNKSTLKTEGKQELDNLYTQLAKIDPNQGRVLVIGHTD 287 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNS 329 + N LS RA S L+ G+ I G + + Sbjct: 288 RI---GSQQYNLPLSQKRAESVVDYLVAKGIPAASIQA-EGRGKEGSVTGSTCDNIKGRA 343 Query: 330 A-------NRRIDILVEDRQ 342 +RR+ I ++ + Sbjct: 344 KLIDCLAPDRRVVINIQGTK 363 >gi|148360690|ref|YP_001251897.1| OmpA family transporter outer membrane protein [Legionella pneumophila str. Corby] gi|148282463|gb|ABQ56551.1| outer membrane protein, OmpA family protein [Legionella pneumophila str. Corby] Length = 240 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 9/145 (6%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L I + ++ K + II MF S L Sbjct: 84 LVASIYRDSKRKIIRDLQKQDIQYVEYGDTRTLIIPTDKYFMFS--SPRLNEICYPGLNN 141 Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + I + G TD +LS +A + L +G++ R+ Sbjct: 142 VIRLLNFYPQSTIYVAGFTDNV---GSRSHKRKLSQAQAETMMTFLWANGIAAKRLKA-E 197 Query: 314 GFAHHRLKIASDP--MNSANRRIDI 336 G+ + ++ NRRI+I Sbjct: 198 GYGDKNAISDNAIIHGSAQNRRIEI 222 >gi|52840894|ref|YP_094693.1| outer membrane protein, OmpA family protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628005|gb|AAU26746.1| outer membrane protein, OmpA family protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 249 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 9/145 (6%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L I + ++ K + II MF S L Sbjct: 93 LVASIYRDSKRKIIRDLQKQDIQYVEYGDTRTLIIPTDKYFMFS--SPRLNEICYPGLNN 150 Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + I + G TD +LS +A + L +G++ R+ Sbjct: 151 VIRLLNFYPQSTIYVAGFTDNV---GSRSHKRKLSQAQAETMMTFLWANGIAAKRLKA-E 206 Query: 314 GFAHHRLKIASDP--MNSANRRIDI 336 G+ + ++ NRRI+I Sbjct: 207 GYGDKNAISDNAIIHGSAQNRRIEI 231 >gi|54293640|ref|YP_126055.1| hypothetical protein lpl0693 [Legionella pneumophila str. Lens] gi|54296680|ref|YP_123049.1| hypothetical protein lpp0711 [Legionella pneumophila str. Paris] gi|296106245|ref|YP_003617945.1| hypothetical protein lpa_01027 [Legionella pneumophila 2300/99 Alcoy] gi|53750465|emb|CAH11859.1| hypothetical protein lpp0711 [Legionella pneumophila str. Paris] gi|53753472|emb|CAH14927.1| hypothetical protein lpl0693 [Legionella pneumophila str. Lens] gi|295648146|gb|ADG23993.1| hypothetical protein lpa_01027 [Legionella pneumophila 2300/99 Alcoy] Length = 230 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 9/145 (6%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L I + ++ K + II MF S L Sbjct: 74 LVASIYRDSKRKIIRDLQKQDIQYVEYGDTRTLIIPTDKYFMFS--SPRLNEICYPGLNN 131 Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + +L + I + G TD +LS +A + L +G++ R+ Sbjct: 132 VIRLLNFYPQSTIYVAGFTDNV---GSRSHKRKLSQAQAETMMTFLWANGIAAKRLKA-E 187 Query: 314 GFAHHRLKIASDP--MNSANRRIDI 336 G+ + ++ NRRI+I Sbjct: 188 GYGDKNAISDNAIIHGSAQNRRIEI 212 >gi|152984801|ref|YP_001349685.1| hypothetical protein PSPA7_4332 [Pseudomonas aeruginosa PA7] gi|150959959|gb|ABR81984.1| probable outer membrane protein [Pseudomonas aeruginosa PA7] Length = 293 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 70/243 (28%), Gaps = 12/243 (4%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 D+ T + + + Q + K + Sbjct: 49 DDGQTVARQAAEPKAEAEHVGSSHWWWPFGKDEAGQDVAAKAAEQKAEIAAAKKDVAAAA 108 Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 K+ N F + + ++ + + + + L E Sbjct: 109 EPKTANPWWWPFGASSAGKASGKPALVQQ-KVTKEWLDAHEKALREAIAGSEFTLERRDN 167 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNI 280 +++ F+ L + +A I + GHTD++ Sbjct: 168 ALIVIAPADY---SFNPKRHTMLMPITLNPLGKVAKMAQADPQSGILVLGHTDST---GS 221 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 N +LS +RA S + SG+ D++ ++ G + + + NRR+++L Sbjct: 222 KAVNDKLSFERAQSVAAIFRLSGLKGDQL-RLKGVGSDMPRADNSSAAGRAQNRRVEVLY 280 Query: 339 EDR 341 R Sbjct: 281 TQR 283 >gi|197121340|ref|YP_002133291.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] gi|220916043|ref|YP_002491347.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|196171189|gb|ACG72162.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] gi|219953897|gb|ACL64281.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 170 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 17/122 (13%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----------STEVISIRGHTDASPFRNI 280 ++N F + P ++++ L + GHTD Sbjct: 52 RKNQCSFKTDTDQLEPGCDQKMKRLSNALVDAKKRLNGAGVKNFKFVVSGHTDT---SGS 108 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN--SANRRIDIL 337 A N LS RA + L+ G+ + I + G + + D + NRR ++ Sbjct: 109 AAHNQELSARRAAVIEKELVARGIPQAEIESV-GMGSKKPLVKPDDTPAKKAKNRRYELQ 167 Query: 338 VE 339 V+ Sbjct: 168 VK 169 >gi|323496692|ref|ZP_08101743.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326] gi|323318274|gb|EGA71234.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326] Length = 204 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 7/108 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 +++ +F S P +Q + E L I I+G N LS Sbjct: 78 ERQLRILFANDSYEINPIFSDQIQTMAEFLEKYQSASIQIQGFASKV---GEPEYNLELS 134 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRI 334 RA++ L+ V R+ I G+ RL+ + ++ NR++ Sbjct: 135 KKRAHAVEDELLSYYVEPSRV-SIIGYGETRLEAQGDDETSHALNRKV 181 >gi|313677243|ref|YP_004055239.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312943941|gb|ADR23131.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 771 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 8/115 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285 S+++ FD +S + LQ+I + + + + I I G+ A N Sbjct: 658 SLLEPVYKIYFDVGASEFDAKYNEQLQEIYQKIKGNEQLGIQISGYASAE---GDPEFNR 714 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 +LS RA G+ RI G+ R A + NRR+++ + D Sbjct: 715 KLSNKRAIEVVNFFNYKGIVRRRIIA-KGYGSTR---ADTKDAAENRRVEVQIVD 765 >gi|304383837|ref|ZP_07366295.1| OmpA family protein [Prevotella marshii DSM 16973] gi|304335093|gb|EFM01365.1| OmpA family protein [Prevotella marshii DSM 16973] Length = 689 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 54/145 (37%), Gaps = 34/145 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I+ + +D + + PE+ L ++ ++L + I +R H D +R N Sbjct: 513 ITAPVLIDNIFYDFNRATLRPESTAALDELVKLLQENPHVTIELRAHCD---YRGSDIYN 569 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---------------------- 322 LS RA + L+ G+++DR+S + G+ R KI Sbjct: 570 KVLSQRRAEAVTAYLVAHGIAKDRLSPV-GYGKERPKIIRRKLTERYPWMKEGDVLSESY 628 Query: 323 -------ASDPMNSANRRIDILVED 340 D N NRR + +V Sbjct: 629 IKRLDASRQDVCNQLNRRTEFIVLR 653 >gi|301384367|ref|ZP_07232785.1| ompA family protein [Pseudomonas syringae pv. tomato Max13] gi|302133682|ref|ZP_07259672.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 320 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 68/212 (32%), Gaps = 11/212 (5%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 ++ S + K K + + + + + ++ Sbjct: 19 PWYWPFGSNDNAQAKPDAVASKPADKPAAPAMVAKSETDTKWWWPFGAEGQKDEPKALPM 78 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248 + + L A E + I+ F+ L P T Sbjct: 79 PDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNT 135 Query: 249 IVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + + ++ +V+ + I GH D N ++S +RA S + SG+ + Sbjct: 136 LGPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERN 192 Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDIL 337 R+S+ G + A+D + NRR++IL Sbjct: 193 RLSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 223 >gi|146312725|ref|YP_001177799.1| putative outer membrane lipoprotein [Enterobacter sp. 638] gi|145319601|gb|ABP61748.1| OmpA/MotB domain protein [Enterobacter sp. 638] Length = 161 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ S E+ +Q + +LA + + GHTD N LSL R Sbjct: 53 DKILFGKNESQLRAESEQQIQSMASLLAGTGLTHARMDGHTDNY---GEESYNQSLSLKR 109 Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 A K + + ++ G ++ + NRR+ +++ Sbjct: 110 ANVVADAWAKGANIPRSNLTT-QGLGKKYPVASNSTSQGRAENRRVAVVI 158 >gi|221134413|ref|ZP_03560718.1| peptidoglycan-associated lipoprotein [Glaciecola sp. HTCC2999] Length = 188 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 49/165 (29%), Gaps = 7/165 (4%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 P ++ + + V + + + T Sbjct: 26 PSEAELAAERNRVAAEQAAAQQAAEQANQEQVRLEAAQRLQQAQEIAEQERDELMSMQTV 85 Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD + + VL K L + + I I GHTD+ N L RA + Sbjct: 86 YFDFDRATIKADFYNVLDKHAAFLVKNMDQTIVIEGHTDSR---GTPEYNIALGERRAQA 142 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 + +GVS +I + F + + + +RR ++ Sbjct: 143 VETYFLNAGVSASQI-SVVSFGEEKPAVTGTSEYAFAQSRRAVVV 186 >gi|109390002|gb|ABG29730.1| OmpA [Riemerella anatipestifer] Length = 255 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 70/265 (26%), Gaps = 24/265 (9%) Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 AS + ++ +D + + ++N ++ Sbjct: 1 FWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCPEVA 60 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 ++ C T D+ + D Sbjct: 61 GPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD----------------TDN 104 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + + + F+ + + PE+ L + Sbjct: 105 DGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKLDQA 164 Query: 256 GEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 EV+ + + GHTD + A N +LS +RA S L GV+ ++ G Sbjct: 165 AEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS-KG 220 Query: 315 FAH---HRLKIASDPMNSANRRIDI 336 AS+ +R++ + Sbjct: 221 VGSAEATVPASASNEERMKDRKVVV 245 >gi|30314416|gb|AAP15417.1| outer membrane lipoprotein precursor [Burkholderia stabilis] Length = 150 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S + ++Q+ + L + + I+G+TD + N L RA + Sbjct: 48 FDFDSYSVKDDYQSLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 104 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + + + NRR D++ Sbjct: 105 RRAMALPGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRRADLV 147 >gi|283786225|ref|YP_003366090.1| outer membrane lipoprotein [Citrobacter rodentium ICC168] gi|282949679|emb|CBG89298.1| outer membrane lipoprotein [Citrobacter rodentium ICC168] Length = 160 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 6/109 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +T +FDK+ ++ +Q + LA + + GHTD N LSL R Sbjct: 52 DTILFDKNDYTLRAQSRQQIQAMAARLASVGLKHARMDGHTDNY---GEESYNEALSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A + G ++ + NRR+ +++ Sbjct: 109 ANVVADAWAEGAQIPRSNLTTQGLGKKYPIASNKTAKGRAENRRVAVVI 157 >gi|253699085|ref|YP_003020274.1| OmpA/MotB domain protein [Geobacter sp. M21] gi|251773935|gb|ACT16516.1| OmpA/MotB domain protein [Geobacter sp. M21] Length = 1709 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNI----ARDNWRLSLDR 291 F + E + +L+ + E + V GH D DN LS +R Sbjct: 109 FRTGDAEISSEYLELLRGVLEKMRGRDNVRLHFVGHADTQQLSGPLKEKFGDNTGLSRER 168 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 A + + ++ G + + NRR+++ V Sbjct: 169 AGTTAEYCQRALALPPEAISYQGLGDAKPVAPNSTEEGRALNRRVEVEV 217 Score = 40.7 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 29/235 (12%), Positives = 67/235 (28%), Gaps = 27/235 (11%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 Q+L + + + T + L + + + P S E+ Sbjct: 146 DTQQLSGPLKEKFGDNTGLSRERAGTTAEYCQRALALPPEAISYQGLGDAKPVAPNSTEE 205 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG------------ILISIID 230 A+ R+ ++ +I + + + RT + + + Sbjct: 206 GRALNRRVEVEVWYDEIGEKMVEKEVVVPAQVNRVKVCRTETVCKMRYKEGLSHRVRVRN 265 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR----DNW 285 +D + E +++ + L + ++D SP D Sbjct: 266 LIAPLQYDAALLTVPEEFQQRIRQALDNLQGKQNLSVKFIAYSDTSPLEARDERIYGDQL 325 Query: 286 RLS---LDR-AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 LS R A + + + S V+ + G +++ NRR+ Sbjct: 326 GLSKAVARRVALAVQEAMKGSKVA----FESDGKGSALPVASNETPQGRVLNRRV 376 >gi|163745388|ref|ZP_02152748.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45] gi|161382206|gb|EDQ06615.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45] Length = 317 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ +S L+++ E+L +++ GHTDA N LS RA + Sbjct: 212 FETGTSALGAGPFATLERLAELLKADPGLRVALVGHTDAV---GSLEANTVLSRKRAEAV 268 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 + L+ V DR+ G + + ++ NRR++++V + Sbjct: 269 RERLVQSYDVDPDRLEA-RGAGYLAPRGSNLTEAGREENRRVEVVVLSAE 317 >gi|320354880|ref|YP_004196219.1| peptidoglycan-associated lipoprotein [Desulfobulbus propionicus DSM 2032] gi|320123382|gb|ADW18928.1| peptidoglycan-associated lipoprotein [Desulfobulbus propionicus DSM 2032] Length = 170 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 F+ SS E + ++ + + + + I I G+ D N L RA Sbjct: 65 PVYFEFDSSSITGEQVQRIETNADFIKKNPDLKIRIEGNCDPR---GTQEYNIALGERRA 121 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILV 338 SA L+ GV+ ++++ +S F +L + + NRR D ++ Sbjct: 122 QSAKTYLINLGVNSNQLTTVS-FGEEKLLLFGHDEISWAQNRRDDFVI 168 >gi|157736533|ref|YP_001489216.1| periplasmic protein [Arcobacter butzleri RM4018] gi|157698387|gb|ABV66547.1| conserved hypothetical protein, probable periplasmic protein [Arcobacter butzleri RM4018] Length = 329 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 120/326 (36%), Gaps = 53/326 (16%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+ + +I A + +Y Q+ E Sbjct: 13 W-ISYADLMAGLL--FVFILVIGAI-------VIKYVYA---------------QSSLES 47 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 S + K L + TKN + ++ K L+ + + E+ NS + Sbjct: 48 SEEAKSQLFYELAKTKNLYESTKDELDKAKNQINLKLSEIEKLKALLLEYELNSKDEKDK 107 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 K + ++ I+ +++ K +L +K +++ I+ + + Sbjct: 108 SEKLALELSEKTNLISLKDDELKLLADKLLVLTQVHQKMVEEFD--IAKLKIKTLTGIKL 165 Query: 213 KGVLFETTRTGILISIIDQRN------TPMFDKSSSIPLPETIVVLQK----------IG 256 + + G I+I ++ +FD++S I E+ L Sbjct: 166 NVISKLREKLGKSINIDEKSGAIKFSSNILFDQNSYILKEESKKELSTVLKQYLNTLLDD 225 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI---- 312 + + E I+I GHT++ N +LS RA + Q L +S + + ++ Sbjct: 226 KEIKKYIESITIEGHTNSD---GTYLSNLQLSQQRALAVMQFLYESNIIDKKLLGTYVNS 282 Query: 313 SGFAHHRLKIAS--DPMNSANRRIDI 336 SG + L + + +++ RRI+I Sbjct: 283 SGRSSSDLILKDGVEDKDAS-RRIEI 307 >gi|197337853|ref|YP_002158755.1| outer membrane protein [Vibrio fischeri MJ11] gi|197315105|gb|ACH64554.1| outer membrane protein [Vibrio fischeri MJ11] Length = 322 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 9/112 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ S + E+ L +SI G+TDA + N SL RA Sbjct: 214 FEFGESRFVVESKQWHSWNELALSVKQGQGKVSITGYTDA---KGTDSANDIESLRRATY 270 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDRQG 343 A +L+K+GV E+RI I+ + D M + NRR+ I R G Sbjct: 271 AADMLIKAGVDEERIL-INSKGSADPLVNEDLMRNESALNRRVVIQFNRRVG 321 >gi|59714283|ref|YP_207058.1| outer membrane protein A [Vibrio fischeri ES114] gi|59482531|gb|AAW88170.1| outer membrane protein A [Vibrio fischeri ES114] Length = 324 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 9/112 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ S + E+ L +SI G+TDA + N SL RA Sbjct: 216 FEFGESRFVVESKQWHSWNELALSVKQGQGKVSITGYTDA---KGTDSANDIESLRRATY 272 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---SANRRIDILVEDRQG 343 A +L+K+GV E+RI I+ + D M + NRR+ I R G Sbjct: 273 AADMLIKAGVDEERIL-INSKGSADPLVNEDLMRNESALNRRVVIQFNRRVG 323 >gi|115522545|ref|YP_779456.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115516492|gb|ABJ04476.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53] Length = 628 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 56/148 (37%), Gaps = 16/148 (10%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 LA + D I I NT F+ S P+ + LQ Sbjct: 467 LAPPVERIERRYSLDEIRYSPSVRQRMPSI------DLNTITFESGSWDIAPDQALKLQA 520 Query: 255 IGEVLAH-----STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDR 308 I + L EV I GHTDA+ DN LS RA SA +L + GV + Sbjct: 521 IADGLNRAIERNPREVFLIEGHTDAT---GNDTDNLSLSDRRAESAAALLTQQFGVPAEN 577 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDI 336 ++ G+ LK+ + ANRR+ + Sbjct: 578 LTS-QGYGEQYLKVPTQGPELANRRVTV 604 >gi|49083180|gb|AAT50966.1| PA1048 [synthetic construct] Length = 294 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 73/270 (27%), Gaps = 11/270 (4%) Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 T + P E++S + + + + F Sbjct: 21 FQTQDASSQPAKAPAEQASSHSWWPFGKDDGQTVAKQATEQKAEAEHVGSSHWWWPFGKD 80 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + K + + + E + S K + + Sbjct: 81 EGGRDVAAKAAEQKAEIAAAKKEVAAAAEPKAANPWWWPFGASSASKASGKPALVQQKVT 140 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + L E +++ F+ L Sbjct: 141 KEWLDAHEKALREAIAGSEFTLERRDNALIVIAPADY---SFNPKRHTMLMPITRNPLGK 197 Query: 256 GEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 +A I + GHTD++ N +LS +RA S + SG+ D++ ++ Sbjct: 198 VAKMAQADPQSGILVLGHTDST---GSKAVNDKLSFERAQSVAAIFRLSGLKGDQL-RLK 253 Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341 G + + + NRR+++L R Sbjct: 254 GVGSDMPRADNASAAGRAQNRRVEVLYTQR 283 >gi|327403146|ref|YP_004343984.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327318654|gb|AEA43146.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 249 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 11/108 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ ++++ E+I L+K+ +L ++ + + GH + LS RA + Sbjct: 149 FENANAVVKAESIPNLEKLNRILLEDTSLFVRLNGHVCCT-------SAQELSFQRANTV 201 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 L+K G+ + RI GF++ +L + + + NRR++ + + Sbjct: 202 MTYLLKHGIPQSRIYA-EGFSNTQLLVPDNSEENMAINRRVEAIFYRK 248 >gi|150388324|ref|YP_001318373.1| OmpA/MotB domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149948186|gb|ABR46714.1| OmpA/MotB domain protein [Alkaliphilus metalliredigens QYMF] Length = 314 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 86/235 (36%), Gaps = 19/235 (8%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 Q Q + +N+ Q + + + +D + L + ++++ + + Sbjct: 58 QDTQQRLEASNLEISQAEDQLRLLTDRVDEIKAEVEDGEIALRLSELQIEDQSQIIAESN 117 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FD 238 +E R + + L + + + V + + + + I + + + FD Sbjct: 118 RELGNLRSRLQGIAVLRLDVLNRVKDSVEEEMARTRDRRDSPVYIADNGNIVIDEELVFD 177 Query: 239 KSSSIPLPETIVVLQK---------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 +S P VL + + + + I+I+GHTD A N LS Sbjct: 178 LNSYQIKPAGRQVLDELAMAFENILRDPEVRVNIDAINIQGHTDDI---GSAEYNRNLSA 234 Query: 290 DRAYSAYQVLMKSG-VSEDRISK---ISGFAHHRLKIASDPM--NSANRRIDILV 338 +R+ L+ S E+R + S ++ R ++ + NRRI+I + Sbjct: 235 NRSVEVVNYLLNSNPTLENRYASYFMASAYSKFRPIASNATEANRAQNRRIEISI 289 >gi|317479876|ref|ZP_07938993.1| OmpA family protein [Bacteroides sp. 4_1_36] gi|316903950|gb|EFV25787.1| OmpA family protein [Bacteroides sp. 4_1_36] Length = 392 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 76/266 (28%), Gaps = 7/266 (2%) Query: 55 NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 DD K Y N G + + + + TK + Sbjct: 111 TQMDDGYYKQRFDYMNLHGDVMFNLNALFGGYNQHRVYEIIPYVGAGFTHNYTKPHREAL 170 Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD--LCKSTDLEKSINKEEN 172 + +++ L S K + G D L + L Sbjct: 171 SVNAGIINRFRISNAIDINLELSAMGVEDKFDGEVGGDHGYDGVLSATVGLTYRFPARGF 230 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P ++ + +L ++ + LVA T I+ Sbjct: 231 RRPMPQLISQVELAAMQAQLAEMGAANQQLQNALVAAQNQPVAEVTETEV-IVPDPDIAP 289 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T F+ S+ P + L + + + ++ G+ D+ N LSL R Sbjct: 290 RTVFFNIGSAEVSPREAMNLSYLADQMKQFPNATYTVNGYADS--ATGTPAFNKELSLKR 347 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFA 316 A + VL+K G+ DR+ +G Sbjct: 348 AQAVVDVLVKQYGIPADRLKVDAGGG 373 >gi|270295719|ref|ZP_06201919.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273123|gb|EFA18985.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 397 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 76/266 (28%), Gaps = 7/266 (2%) Query: 55 NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 DD K Y N G + + + + TK + Sbjct: 116 TQMDDGYYKQRFDYMNLHGDVMFNLNALFGGYNQHRVYEIIPYVGAGFTHNYTKPHREAL 175 Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD--LCKSTDLEKSINKEEN 172 + +++ L S K + G D L + L Sbjct: 176 SVNAGIINRFRISNAIDINLELSAMGVEDKFDGEVGGDHGYDGVLSATVGLTYRFPARGF 235 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P ++ + +L ++ + LVA T I+ Sbjct: 236 RRPMPQLISQVELAAMQAQLAEMGAANQQLQNALVAAQNQPVAEVTETEV-IVPDPDIAP 294 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T F+ S+ P + L + + + ++ G+ D+ N LSL R Sbjct: 295 RTVFFNIGSAEVSPREAMNLSYLADQMKQFPNATYTVNGYADS--ATGTPAFNKELSLKR 352 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFA 316 A + VL+K G+ DR+ +G Sbjct: 353 AQAVVDVLVKQYGIPADRLKVDAGGG 378 >gi|307718765|ref|YP_003874297.1| OmpA family protein [Spirochaeta thermophila DSM 6192] gi|306532490|gb|ADN02024.1| OmpA family protein [Spirochaeta thermophila DSM 6192] Length = 1337 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 32/263 (12%), Positives = 77/263 (29%), Gaps = 23/263 (8%) Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 + + + + T +++ + ++ + + Sbjct: 1083 GDEMTVESSPFVLDVQPPELSISLSPTPFSPDNDGVDDELAISIRARDLTGIQTWEIVIT 1142 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + + + S + + LS E + + + + ++ +T + Sbjct: 1143 DPYGNPFTRFGGQGSPAPQIIWDGRSLSGELVSSAEDYPLIFTATDRVGNTARFET--KV 1200 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHST 263 VL + I I F + + + + +K ++ + Sbjct: 1201 SVDVLVIREGDKLKIKISSIH----FPPNKADLILDESEEGRKNRAIIERLVQIFTKYRR 1256 Query: 264 EVISIRGHTDASPFRNIARDNWR----LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 I I GH A R+ LSL RA + Q L+ G+ RI+ G Sbjct: 1257 YKIRIEGH--AVNLSGTEREEREELVPLSLARAEAVKQALVAMGLDPGRITTA-GMGGRF 1313 Query: 320 LKIA--SDPMNSANRRIDILVED 340 + + NRR++ ++ Sbjct: 1314 PIVPHTDEKNRWKNRRVEFILLK 1336 >gi|293390339|ref|ZP_06634673.1| lipoprotein PlpD [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950873|gb|EFE00992.1| lipoprotein PlpD [Aggregatibacter actinomycetemcomitans D7S-1] Length = 274 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 14/112 (12%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292 +FD + V+ K+ L S + + + G+TD N LS RA Sbjct: 142 DFLFDFDKDTLTVKGREVVDKVAAQLKESKAQEVKVAGYTDRL---GSKVYNMDLSQRRA 198 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSA-------NRRIDI 336 L++ G+ +I+ + G+ ++ +S NRR++I Sbjct: 199 DRVKNRLIEQGID-VQINTV-GYGEAHQVQACNNVKSSQLISCLRPNRRVEI 248 >gi|90581709|ref|ZP_01237497.1| hypothetical protein VAS14_19366 [Vibrio angustum S14] gi|90437124|gb|EAS62327.1| hypothetical protein VAS14_19366 [Vibrio angustum S14] Length = 261 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 71/216 (32%), Gaps = 7/216 (3%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + +Q E + L + +G C K N LS Sbjct: 23 PAPGETPLPPPKQAQLRQLELHQFELQLLAIRGAKHCLPGQYIKLQNLYLQARKEALSGF 82 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 A + Q I + L + + + + + + F + Sbjct: 83 DHDAEMTLLKYQTQNAVIQQQMDWLEYNTLCLQPNYSEVELKERFLLYMEVDNQ-FALNK 141 Query: 242 SIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 S LP+ L+ E+L S + + G+TD+ + N+ L L+RA + L+ Sbjct: 142 STLLPKYRESLRYAAEILKRQSHWHLQLTGYTDSQ---GHIQGNYMLGLERANAVKDSLI 198 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSANRR-ID 335 ++GV ++I + ++ + N R ++ Sbjct: 199 ENGVDPNQI-SVFSVGENQAVADNTLTQQLNNRKVE 233 >gi|89889840|ref|ZP_01201351.1| OmpA family protein [Flavobacteria bacterium BBFL7] gi|89518113|gb|EAS20769.1| OmpA family protein [Flavobacteria bacterium BBFL7] Length = 625 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 11/116 (9%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 N FD +S P+ + L ++ + E + + D R N L+ R Sbjct: 514 NKIYFDLDASNIRPDAALELDRLVSFMKKYPELEVMAETYAD---IRGSDSYNLALTQRR 570 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------SDPMNSANRRIDILVEDR 341 A S ++ GV R++ + G + + +RR + + R Sbjct: 571 AESIVAYVVSQGVDASRLTAV-GRGEANPVMDCASQKCTSAEYELSRRSEFTITKR 625 >gi|89053487|ref|YP_508938.1| OmpA/MotB [Jannaschia sp. CCS1] gi|88863036|gb|ABD53913.1| OmpA/MotB [Jannaschia sp. CCS1] Length = 217 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 4/98 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S+ E +L + + + E S+ GHTDA N RL RA +A Sbjct: 79 FAFNSAELDAEARNILAQQAAFIRNFPEVRFSVYGHTDAVGSNG---YNQRLGRRRARAA 135 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 L+ GVS R++ + + +A+D NRR Sbjct: 136 VNFLVSQGVSRHRLAALVSLGETQPVVATDMEERRNRR 173 >gi|115358599|ref|YP_775737.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD] gi|115283887|gb|ABI89403.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 163 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + + FD PE +LQ + L + I+G+TD + N L Sbjct: 57 KRSVYFDFDQYSVKPEFQSLLQSHADYLRNHPSRRVLIQGNTDER---GTSEYNLALGQR 113 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 R+ + L GV ++ +S + + + NRR D++ Sbjct: 114 RSQAVMSALETLGVQATQLEAVS-LGKEKPVALGHDEDSWAQNRRADLV 161 >gi|224532865|ref|ZP_03673480.1| outer membrane protein [Borrelia burgdorferi WI91-23] gi|224512254|gb|EEF82640.1| outer membrane protein [Borrelia burgdorferi WI91-23] Length = 381 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 I + + + + +K + E GI +S + F +S L + + I ++ Sbjct: 245 IETEVENYIREKKIKAIEVEKNNKGINLSFDIE-----FYPNSFQILQKEYKKIDLIAKL 299 Query: 259 LAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFA 316 L I I GHT+ + + LS RA + L+K V +D+I G+ Sbjct: 300 LEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAIGNYLIKMKVKDKDQIL-FKGWG 355 Query: 317 HHRLKIA-SDPMNSANRRIDILVED 340 + K S P+ + NRR++I + + Sbjct: 356 SQKPKHPKSSPLKAKNRRVEITILN 380 >gi|58584412|ref|YP_197985.1| Outer membrane protein, pal-like [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418728|gb|AAW70743.1| Outer membrane protein, pal-like [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 159 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 17/136 (12%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270 +GV ++ + ++R FD S L + EVL +++ G Sbjct: 23 KRGVNAINKMNFVVKQMKEKR--VFFDYDKSDISEAGADTLLDVMEVLQDDPNVKVTLIG 80 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK--IASDP- 326 HTD N L RA +A ++ + E+RI S +A D Sbjct: 81 HTDNR---GSYEYNVALGARRADAAKNFMVSCTPYLENRIKTAS-KGETEPLVYVADDSK 136 Query: 327 ------MNSANRRIDI 336 ++ NRR++ Sbjct: 137 NSKYEKEHAKNRRVEF 152 >gi|315185632|gb|EFU19400.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578] Length = 1337 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 32/263 (12%), Positives = 77/263 (29%), Gaps = 23/263 (8%) Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 + + + + T +++ + ++ + + Sbjct: 1083 GDEMTVESSPFVLDVQPPELSISLSPTPFSPDNDGVDDELAISIRARDLTGIQTWEIVIT 1142 Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + + + S + + LS E + + + + ++ +T + Sbjct: 1143 DPYGNPFTRFGGQGSPAPQIIWDGRSLSGELVSSAEDYPLIFTATDRVGNTARFET--KV 1200 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--------AHST 263 VL + I I F + + + + +K ++ + Sbjct: 1201 SVDVLVIREGDKLKIKISSIH----FPPNKADLILDESEEGRKNRAIIERLVQIFTKYRR 1256 Query: 264 EVISIRGHTDASPFRNIARDNWR----LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 I I GH A R+ LSL RA + Q L+ G+ RI+ G Sbjct: 1257 YKIRIEGH--AVNLSGTEREEREELVPLSLARAEAVKQALVAMGLDPGRITTA-GMGGRF 1313 Query: 320 LKIA--SDPMNSANRRIDILVED 340 + + NRR++ ++ Sbjct: 1314 PIVPHTDEKNRWKNRRVEFILLK 1336 >gi|312884808|ref|ZP_07744500.1| hypothetical protein VIBC2010_03887 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367460|gb|EFP95020.1| hypothetical protein VIBC2010_03887 [Vibrio caribbenthicus ATCC BAA-2122] Length = 266 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S E L + + I + G++D+ + N +LS RA Sbjct: 151 FFASGKSSLSSEQRETLSAFYSYIKVADNINRILVDGYSDS---AGSSVVNLQLSRQRAQ 207 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-SANRRIDILVED 340 +A L G +E + ++ L + + + NRR+ + + Sbjct: 208 AAADYLQFLG-TEQNLIEVRAHGERYLFNNNASNSGAKNRRVTLRLVR 254 >gi|262197769|ref|YP_003268978.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262081116|gb|ACY17085.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 333 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 68/227 (29%), Gaps = 10/227 (4%) Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 S + + + + + + + + + + + + ++ ++ Sbjct: 111 GSSEANVREVERVLARNQPQRDRDVVVARRSTPTQPTRKAEEPTGTRRIAQTPTERRTEE 170 Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 P + + + +A + V + R + S Sbjct: 171 PTRTPTPTPTPTPTEVEPEPTREPTRVATLPRAEREDEVERTTPRRTEKPRQRNAKVPSF 230 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRL 287 F +S +L + L + E +I GHTDA A N L Sbjct: 231 T---KELYFGSNSVRLSARNRRLLMRNVRWLEANPEASLTIEGHTDA---SGPAEYNLIL 284 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 RA S L++ GV RI +S LK ++ NRR+ Sbjct: 285 GERRAESVQSFLIEQGVDSGRIDVVS-RGEDDLKYK--SGSAKNRRV 328 >gi|254524741|ref|ZP_05136796.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Stenotrophomonas sp. SKA14] gi|219722332|gb|EED40857.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Stenotrophomonas sp. SKA14] Length = 280 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDR 291 +F S+ E +Q I + + I + G+TD A N LS R Sbjct: 165 DALFGFDSAKLSAEGQQAVQGILAQVREAAQVQSIRVTGYTDRI---GSASYNQALSQRR 221 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI 336 A + L++ GV IS G + + N NRR+ I Sbjct: 222 ADAVRTALVQGGVPAGSISA-EGRGAAEPIVQCEQHNRRELIACLAPNRRVQI 273 >gi|315635693|ref|ZP_07890956.1| chemotaxis protein MotB [Arcobacter butzleri JV22] gi|315479990|gb|EFU70660.1| chemotaxis protein MotB [Arcobacter butzleri JV22] Length = 329 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 120/326 (36%), Gaps = 53/326 (16%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W I YAD M L+ F+ + +I A + +Y Q+ E Sbjct: 13 W-ISYADLMAGLL--FVFILVIGAI-------VIKYVYA---------------QSSLES 47 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 S + K L + TKN + ++ K L+ + + E+ NS + Sbjct: 48 SEEAKSQLFYELAKTKNLYESTKDELDKAKNQINLKLSEIEKLKALLLEYELNSKDEKDK 107 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 K + ++ I+ +++ K +L +K +++ I+ + + Sbjct: 108 NEKLALELSEKTNLISLKDDELKLLADKLLVLTQVHQKMVEEFD--IAKLKIKTLTGIKL 165 Query: 213 KGVLFETTRTGILISIIDQRN------TPMFDKSSSIPLPETIVVLQK----------IG 256 + + G I+I ++ +FD++S I E+ L Sbjct: 166 NVISKLREKLGKSINIDEKSGAIKFSSNILFDQNSYILKEESKKELSTVLKQYLNTLLDD 225 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI---- 312 + + E I+I GHT++ N +LS RA + Q L +S + + ++ Sbjct: 226 KEIKKYIESITIEGHTNSD---GTYLSNLQLSQQRALAVMQFLYESNIIDKKLLGTYVNS 282 Query: 313 SGFAHHRLKIAS--DPMNSANRRIDI 336 SG + L + + +++ RRI+I Sbjct: 283 SGRSSSDLILKDGVEDKDAS-RRIEI 307 >gi|167584247|ref|ZP_02376635.1| outer membrane protein, OmpA/MotB family [Burkholderia ubonensis Bu] Length = 165 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + E + +LQ + L I+G+TD + N L R+++ Sbjct: 64 FDFDAYDVKSEYLTLLQAHADYLRRHPSQRVLIQGNTDER---GTSEYNLALGQRRSHAV 120 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 L+ GV E ++ +S F + + S NRR D++ Sbjct: 121 MSALVTLGVPETQLEAVS-FGKEKPVALGHDEASWSQNRRADMV 163 >gi|269123640|ref|YP_003306217.1| OmpA/MotB domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268314966|gb|ACZ01340.1| OmpA/MotB domain protein [Streptobacillus moniliformis DSM 12112] Length = 314 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 10/105 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ + I + I V+ + L + I + G+TD + N L L+RA S Sbjct: 218 FNSNKFILNKKQIDVIDALVPNLQNRE--IIVIGYTDTD---GNDKYNLELGLNRANSVK 272 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L G+ ++I + + L ++ + + NRR++++V+ Sbjct: 273 VYLENKGIKVNQIRTV---GFNELITNNNTLENKSLNRRVELIVK 314 >gi|119474630|ref|ZP_01614983.1| flagellar motor protein [marine gamma proteobacterium HTCC2143] gi|119450833|gb|EAW32066.1| flagellar motor protein [marine gamma proteobacterium HTCC2143] Length = 110 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 11/105 (10%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 +AD M++LM FF+++ + D K + F QN + Sbjct: 1 MSTFADLMSLLMCFFVLLLSFSEMDAMKFKRLAGSMAQA-----------FGVQNKLDMK 49 Query: 94 SQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 K I + + D + + E ++ + Sbjct: 50 DPPKGTSIIAQEFSPGRPDPTPINQIYQYTDDLTELSLEVKAAED 94 >gi|119896707|ref|YP_931920.1| putative peptidoglycan-associated lipoprotein [Azoarcus sp. BH72] gi|119669120|emb|CAL93033.1| putative peptidoglycan-associated lipoprotein [Azoarcus sp. BH72] Length = 172 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + FD S + + +++ G LA + ++ ++G+ D N L Sbjct: 62 SKRNVFFDFDSYVIKADAKPLVEAHGRFLAQNPQMKMLVQGNADER---GSREYNLALGQ 118 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 RA + Q L+ G E +I +S + + + NRR Sbjct: 119 KRADAVKQALLLLGAKEAQIESVS-LGEEKPRCTESSEACFAQNRR 163 >gi|148547849|ref|YP_001267951.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1] gi|148511907|gb|ABQ78767.1| OmpA/MotB domain protein [Pseudomonas putida F1] Length = 831 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 87/294 (29%), Gaps = 19/294 (6%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 ++ + +T + + +R+++ +S + + ++ + + Sbjct: 540 FATLQNVMLKPTADNLTRTLYLLTTLKVYQRNTRELQPVSGIDSVEAEALPHDNRAQSIA 599 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + LS Q+ L + KS+ + Sbjct: 600 NFGKAALDTYVMLSPGQREHADPAFLKAHLPDYWYPAIARHTGKSMAAAGSEAGGNQDYL 659 Query: 182 KILAM----KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + R D+ + + + + N + + ++ R I++ Sbjct: 660 YASRQITFYSDQIREPDVPRILDNAFLMSSSRNYIDSLRAQSLRAIETITLESDTLFAFG 719 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 E L I L ++ + I I GH D ++ N ++S RA + Sbjct: 720 RADFQSLKNEGQHQLSAIASKLLNTPNIGKIIISGHADQL---GDSQGNLQVSKQRAQTI 776 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA---------NRRIDILVED 340 L+ GV + + G + + D NRR++I V Sbjct: 777 RTYLVGKGVPAE-LVVAQGEGSRKPLVNCDMQQPRTQLIKCLEPNRRVEIEVRG 829 >gi|329755862|gb|AEC04328.1| outer membrane protein A [Pasteurella multocida] Length = 348 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 47/148 (31%), Gaps = 16/148 (10%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-V 265 V + ++ F + P VL I +A Sbjct: 205 VTAGLSYRFGQSVYVPEVVSKTFTLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSAS 264 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS- 324 +++ G+TD N +LS RA + L GV+++ IS +G + Sbjct: 265 VAVAGYTDRL---GSDAYNLKLSQRRADTVANYLEAKGVAQNAISA-TGHGEANPVTGNK 320 Query: 325 -DPMNSA---------NRRIDILVEDRQ 342 D + +R ++I V+ + Sbjct: 321 CDSVKGRKALIACLADDRPVEIAVKGNK 348 >gi|257482066|ref|ZP_05636107.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 65 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 N LS RA S L GV + + + G + ++ + NRR+++ ++ Sbjct: 2 NMDLSQQRAQSVATYLTSQGVDQSHL-SVRGAGPDQPIASNADVNGRAQNRRVEVNLKPI 60 Query: 342 QG 343 G Sbjct: 61 PG 62 >gi|228469693|ref|ZP_04054661.1| immunogenic 75 kDa protein PG4 [Porphyromonas uenonis 60-3] gi|228308712|gb|EEK17438.1| immunogenic 75 kDa protein PG4 [Porphyromonas uenonis 60-3] Length = 559 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 34/139 (24%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLS 288 +Q + +D + E L + +L + +V + +TD + R N RLS Sbjct: 423 EQIHDIYYDFDRASLRLEGKKSLDYLVTLLEQNPDVRLELSSNTDR---KGSQRYNKRLS 479 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----------------------- 325 RA S L+ G++ DR+ G+ R + + Sbjct: 480 QRRAQSVVNYLIAKGIAADRLEA-RGYGKERPYVVTKGMATRFDWLPEGQELTAEWVGAL 538 Query: 326 PMNSA------NRRIDILV 338 NRR + V Sbjct: 539 TEEQQVVCDQLNRRTEFTV 557 >gi|157369523|ref|YP_001477512.1| peptidoglycan-associated outer membrane lipoprotein [Serratia proteamaculans 568] gi|157321287|gb|ABV40384.1| Peptidoglycan-associated lipoprotein [Serratia proteamaculans 568] Length = 171 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277 + + + + + N F E +L L ++ ++ GH D Sbjct: 53 EEQARLQMQELQKNNIVYFGLDKYDVSSEFAQMLDAHAAFLRNNPSYKVTVEGHADER-- 110 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L R+ S L GVS D+IS +S + + + + NRR Sbjct: 111 -GTPEYNIALGERRSNSVKMYLQGKGVSADQISIVS-YGKEKPAVLGHDEAAYAKNRRAV 168 Query: 336 IL 337 ++ Sbjct: 169 LV 170 >gi|319795794|ref|YP_004157434.1| peptidoglycaN-associated lipoprotein [Variovorax paradoxus EPS] gi|315598257|gb|ADU39323.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus EPS] Length = 167 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 FD P+ +++ L + + + GHTD+ N L Sbjct: 61 PKIVYFDFDKYNIRPQDQRIVEAHASFLKNRSTSRVVIEGHTDSR---GGREYNLALGQR 117 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 R+ S + L + GV +R+ IS + + NRR + Sbjct: 118 RSESVQRALTQLGVPAERVEAIS-WGIEKPASMETTEEGYQLNRRAEF 164 >gi|170703595|ref|ZP_02894341.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria IOP40-10] gi|172063336|ref|YP_001810987.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MC40-6] gi|170131500|gb|EDT00082.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria IOP40-10] gi|171995853|gb|ACB66771.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MC40-6] Length = 163 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + + FD PE +LQ + L + I+G+TD + N L Sbjct: 57 KRSVYFDFDQYSVKPEYQSLLQSHADYLRNHPSRRVLIQGNTDER---GTSEYNLALGQR 113 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 R+ + L GV ++ +S + + + NRR D++ Sbjct: 114 RSQAVMSALETLGVQATQLEAVS-LGKEKPVALGHDEDSWAQNRRADLV 161 >gi|288926326|ref|ZP_06420250.1| OmpA family protein [Prevotella buccae D17] gi|288336931|gb|EFC75293.1| OmpA family protein [Prevotella buccae D17] Length = 684 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 5/97 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I+ + ++ + PE+ L ++ ++L + I + H D ++ N Sbjct: 509 ITAPVLIDNIFYEFDKANLTPESTKALDELVKLLNENPNVTIELSAHCD---YKGSMEYN 565 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 RLS RA + L+ G++ DR++ G+ R K Sbjct: 566 KRLSQRRAEAVVAYLVGHGIARDRLTPA-GYGKERPK 601 >gi|188527909|ref|YP_001910596.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori Shi470] gi|188144149|gb|ACD48566.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori Shi470] Length = 183 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 48/162 (29%), Gaps = 6/162 (3%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 KE + K +Q + K + + FD Sbjct: 24 DKEAVAGDVSAKAVQSAPVSTETVQEKQEPKEEPKQEPAPVVEEKPAVESGTIIASIYFD 83 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 L +I + + + + G+TD + N L + R S Sbjct: 84 FDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVKNA 140 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L+ GV +D I IS F + K NRR+D+ + Sbjct: 141 LIIKGVEKDMIKTIS-FGETKPKCTQKTKECYKENRRVDVKL 181 >gi|213950522|gb|ACJ54534.1| outer membrane protein A [Haemophilus parasuis] Length = 305 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 7/91 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 219 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 275 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 RA + ++ GV+ ++ + G+ Sbjct: 276 KRAETVANYIVSKGVNPANVTAV-GYGEANP 305 >gi|220921404|ref|YP_002496705.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219946010|gb|ACL56402.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060] Length = 213 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 8/102 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F +S+ + V++ +G LA +I I GHTDA + R N LS RA Sbjct: 102 FAYNSATIGRTALPVVKMLGATLARPQLASSIILIVGHTDA---KGSDRVNQLLSERRAE 158 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 + Q ++++ GV + + G+ RLK ++P+ ANRR+ Sbjct: 159 AVKQYIVQNYGVPAGNLVAV-GYGKSRLKDPANPLAPANRRV 199 >gi|15596245|ref|NP_249739.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|218892990|ref|YP_002441859.1| putative outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|254234184|ref|ZP_04927507.1| hypothetical protein PACG_00018 [Pseudomonas aeruginosa C3719] gi|254239405|ref|ZP_04932727.1| hypothetical protein PA2G_00018 [Pseudomonas aeruginosa 2192] gi|313105999|ref|ZP_07792260.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] gi|9946962|gb|AAG04437.1|AE004537_2 probable outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|126166115|gb|EAZ51626.1| hypothetical protein PACG_00018 [Pseudomonas aeruginosa C3719] gi|126192783|gb|EAZ56846.1| hypothetical protein PA2G_00018 [Pseudomonas aeruginosa 2192] gi|218773218|emb|CAW29030.1| probable outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|310878762|gb|EFQ37356.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] Length = 293 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 74/270 (27%), Gaps = 11/270 (4%) Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 T + P E++S + + + + F Sbjct: 21 FQTQDASSQPAKAPAEQASSHSWWPFGKDDGQTVAKQATEQKAEAEHVGSSHWWWPFGKD 80 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + K + + + E + S K + + Sbjct: 81 EGGRDVAAKAAEQKAEIAAAKKEVAAAAEPKAANPWWWPFGASSASKASGKPALVQQKVT 140 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + L E +++ F+ L + Sbjct: 141 KEWLDAHEKALREAIAGSEFTLERRDNALIVIAPADY---SFNPKRHTMLMPITLNPLGK 197 Query: 256 GEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 +A I + GHTD++ N +LS +RA S + SG+ D++ ++ Sbjct: 198 VAKMAQADPQSGILVLGHTDST---GSKAVNDKLSFERAQSVAAIFRLSGLKGDQL-RLK 253 Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341 G + + + NRR+++L R Sbjct: 254 GVGSDMPRADNASAAGRAQNRRVEVLYTQR 283 >gi|254390197|ref|ZP_05005416.1| secreted protein [Streptomyces clavuligerus ATCC 27064] gi|294814756|ref|ZP_06773399.1| Putative secreted protein [Streptomyces clavuligerus ATCC 27064] gi|326443135|ref|ZP_08217869.1| secreted protein [Streptomyces clavuligerus ATCC 27064] gi|197703903|gb|EDY49715.1| secreted protein [Streptomyces clavuligerus ATCC 27064] gi|294327355|gb|EFG08998.1| Putative secreted protein [Streptomyces clavuligerus ATCC 27064] Length = 250 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 69/242 (28%), Gaps = 10/242 (4%) Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161 + + L L + + L + D Sbjct: 1 MGGTTARRPAAPAARRPAALVLAAALLLTGGQLHAATAATAAGPGLRPPAAGADDPVPPP 60 Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 + ++ E+ LPP+ + + L + +TL+ +IV V E Sbjct: 61 GEDPALPPVEDPALPPVGEAATPLPQIDADNPGLRMREGATLAEPRVLDIVSIVESEGGE 120 Query: 222 TGILISI----IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASP 276 + + +F + S P + I E + + + + + G TD Sbjct: 121 ERREQTTVSLKFALQAEVLFGRDSHELNPRANSRIAAIAEEIRRNGAKQVRVFGFTDDL- 179 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 R LS RA + + +L + G++ + NRR+ Sbjct: 180 --GSYRHGRTLSRKRADAVHAMLDGQVEDHTVSYIVRGYSEDFPIADNSTEEGREKNRRV 237 Query: 335 DI 336 ++ Sbjct: 238 EV 239 >gi|332519342|ref|ZP_08395809.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] gi|332045190|gb|EGI81383.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4] Length = 311 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 42/116 (36%), Gaps = 9/116 (7%) Query: 228 IIDQRNTPMFDKS--SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I FD S + + KI + I I GHTD + N Sbjct: 199 IKANSLMLYFDTGAASINLTTQQREKVSKIVRYIDKVDNAKIRITGHTDNT---GNRETN 255 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L +RA A L+++G++ ++I+ S + + NRR+ + + Sbjct: 256 IGLGKNRAEFAKSYLVQNGITSNKINTFS-KGPDEPIADNSTEAGKAKNRRLVVTI 310 Score = 40.3 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 6/75 (8%) Query: 244 PLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 L+++ L + + I + G+ A A N L L RA + + Sbjct: 88 VSDGLKTQLERVAAYLKDNPDKAIDVTGYYTAEEKNESAFPN--LGLARANAIKNYFVSI 145 Query: 303 GVSEDRISKISGFAH 317 GVS +I+ + Sbjct: 146 GVSTKKINT---YGE 157 >gi|170288056|ref|YP_001738294.1| OmpA/MotB domain-containing protein [Thermotoga sp. RQ2] gi|170175559|gb|ACB08611.1| OmpA/MotB domain protein [Thermotoga sp. RQ2] Length = 288 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 11/118 (9%), Positives = 34/118 (28%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 ++ W Y+D +T+L+ FF+ + ++ + + + Sbjct: 3 KKREEEQKGSPQWMTTYSDMVTLLLTFFVALISMSTISPGKFQQVAVGLRIALSGNPPSV 62 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 N + + +++ + L++ +F+ S Sbjct: 63 LMGGRSINEEPLITSKRGIYQELMRLSEEYKGKITVEERDEGTLIVLKDMVFFEPGSA 120 Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVIS 267 + + E G LI + D F+ S+ E +L K+G++ + H+T V+ Sbjct: 90 EEYKGKITVEERDEGTLIVLKD---MVFFEPGSAKLTAEAKELLAKVGQIVIEHTTNVLE 146 Query: 268 IRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + G+ D +I NW LS RA S + + E R+ + Sbjct: 147 VYGYADDRLPLPNSIYVSNWHLSSARAASVVNFFLTE-LKEKRMIE 191 >gi|86157306|ref|YP_464091.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85773817|gb|ABC80654.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter dehalogenans 2CP-C] Length = 170 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 17/122 (13%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH----------STEVISIRGHTDASPFRNI 280 ++N F + P ++++ L + GHTD Sbjct: 52 RKNQCSFKTDNDQLEPGCDQKMKRLSNALVDAKKRLNGAGVKNFKFVVSGHTDT---SGS 108 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMN--SANRRIDIL 337 A N LS RA + L+ G+ + I + G + + D + NRR ++ Sbjct: 109 AAHNQELSARRAAVIEKELVARGIPQAEIESV-GMGSKKPLVKPDDTPAKKAKNRRYELQ 167 Query: 338 VE 339 V Sbjct: 168 VR 169 >gi|82523947|emb|CAI78669.1| OmpA protein [uncultured delta proteobacterium] Length = 408 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 5/103 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + + L+ + ++ I I GHTD + N + SL+RA + + Sbjct: 305 FGMNELAMNEAALAELKVFYNKVKDASGKIVIEGHTD---GHGDSAANLKASLERAVNTW 361 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 + L G+S+ ++ G + ++ NRR+++ Sbjct: 362 RKLQSMGLSDKIKVELRGVGGSKPVADNNTQEGRDKNRRVELT 404 >gi|29829787|ref|NP_824421.1| secreted protein [Streptomyces avermitilis MA-4680] gi|29606896|dbj|BAC70956.1| putative secreted protein [Streptomyces avermitilis MA-4680] Length = 226 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 65/223 (29%), Gaps = 19/223 (8%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 T ++ + + + + ++ G + S + + P Sbjct: 4 TPRRATATATATATTLTALAVLATLTLTVPSAVADDGDPSAPPGSVTTSPPPDVDANSPG 63 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 L + K L D+ + ++ V F + +F Sbjct: 64 LKLADGATLAPAKVL-DIKSVVEDLGGEERREDTNADVTFAL------------QAEVLF 110 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 K S PE + I + + + + G TD LS RA + + Sbjct: 111 PKDSPKLNPEARSRINAIADEIKKQNATNVRVFGFTDNL---GSYAHGLTLSKKRAEAVH 167 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L + S+D ++ G++ + NRR+++ Sbjct: 168 DQLASALGSQDVTFEVRGYSEDYPIADNTSEQGRRKNRRVEVT 210 >gi|91792756|ref|YP_562407.1| OmpA/MotB [Shewanella denitrificans OS217] gi|91714758|gb|ABE54684.1| OmpA/MotB [Shewanella denitrificans OS217] Length = 289 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +++ + + L+K+ E L++ EV + I G TD+ N +S +RA S Sbjct: 184 YEEGDTELTHFSKYQLKKVQEYLSYDPEVELVLIDGFTDSY---GPKSINQTVSNNRADS 240 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 Q+L+ SG+ +D+I +G R +++ NRR+ I + Sbjct: 241 IKQLLIASGIPKDKIIS-NGHGEKRHVASNELVQERERNRRVVIQL 285 >gi|308063911|gb|ADO05798.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori Sat464] Length = 179 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 67 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K NRR+D+ + Sbjct: 124 ALGVKRTLSVKNALIIKGVEKDMIKTIS-FGETKPKCTQKTKECYKENRRVDVKL 177 >gi|194295656|gb|ACF40855.1| outer membrane protein [Riemerella anatipestifer] gi|194295658|gb|ACF40856.1| outer membrane protein [Riemerella anatipestifer] gi|194295660|gb|ACF40857.1| outer membrane protein [Riemerella anatipestifer] gi|194295662|gb|ACF40858.1| outer membrane protein [Riemerella anatipestifer] gi|194295664|gb|ACF40859.1| outer membrane protein [Riemerella anatipestifer] gi|194295666|gb|ACF40860.1| outer membrane protein [Riemerella anatipestifer] Length = 270 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 66/248 (26%), Gaps = 21/248 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 42 LANFWQASASLNFRFGNRDKDKDGVLDKDDACPETPGLPEFQGCPDTDGDGVPDKDDNCL 101 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T + ++ + + Sbjct: 102 EVAGPVENNGCPWPDTDNDGVLDKDDACPEVAGPVENNGCPWPD---------------- 145 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 146 TDNDGVLDKDDKCPSVPGLPEYNGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 205 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 206 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 262 Query: 312 ISGFAHHR 319 G Sbjct: 263 -KGVGSAE 269 >gi|329849481|ref|ZP_08264327.1| ompA family protein [Asticcacaulis biprosthecum C19] gi|328841392|gb|EGF90962.1| ompA family protein [Asticcacaulis biprosthecum C19] Length = 408 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 38/114 (33%), Gaps = 9/114 (7%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWR 286 D+ F+ S + V+ + + + GH D A N R Sbjct: 297 YEDRTFIVYFEFDKSDLTADAQAVVSAAADYAKTGGAARVVVVGHADT---SGSAAYNIR 353 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR--IDI 336 LS RA + L GV ++ + + +A+ NRR IDI Sbjct: 354 LSERRAKTVADALAGLGVDGSKL-AVDWKGESQPAVATGDGVKEPLNRRSTIDI 406 >gi|24217389|ref|NP_714872.1| outer membrane protein OmpA [Leptospira interrogans serovar Lai str. 56601] gi|45655825|ref|YP_003634.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24202471|gb|AAN51887.1| OmpA-family protein [Leptospira interrogans serovar Lai str. 56601] gi|45602796|gb|AAS72271.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 383 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+K+S E+ L ++ + + + + GHT N ++SL RA + Sbjct: 281 FEKNSIQIHKESRPSLNRLARWMKQDSSIRVKVIGHTS---LEGSEDANQKVSLLRAQTV 337 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + +G+S+DR I + NRR+++ + Sbjct: 338 RNYIAGNGISKDRFEIIP-KGASVPIGDNSKEEGKEMNRRVELRI 381 >gi|21223388|ref|NP_629167.1| secreted protein [Streptomyces coelicolor A3(2)] gi|8218177|emb|CAB92608.1| putative secreted protein [Streptomyces coelicolor A3(2)] Length = 203 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 57/194 (29%), Gaps = 18/194 (9%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + S+ + E P K A + ++ D+ + Sbjct: 18 ASVGVSQSYAADDPPGTEPSASAPVEVDPNDPDLKLPDGATLAQAKVLDIKSVVEEQSGD 77 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTE 264 ++ V + +F K SS E ++ I + + + Sbjct: 78 ERREDTNTSVTLAL------------QAEVLFGKDSSKLGAEAKSRIRGIADEIRTQNAT 125 Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + + G TD + LS RA + + VL +S ++ G+ + Sbjct: 126 RVRVFGFTDDL---GSSAHGDVLSKRRANAVHDVLSQSLNDAGITYEVRGYGEQYPIADN 182 Query: 325 DPMNSA--NRRIDI 336 NRR+++ Sbjct: 183 STEAGRKKNRRVEV 196 >gi|144898731|emb|CAM75595.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Magnetospirillum gryphiswaldense MSR-1] Length = 174 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + + S + L + L ++ I GH D N L R Sbjct: 68 DRVYYGTDSHSLNADAKATLDRQAAFLRRYPTVMLRIEGHADER---GTREYNLALGDRR 124 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A S + L+ GV+ R+S + F R + A++ + NRR Sbjct: 125 AQSVKEYLLAQGVASGRLSTST-FGKERPEANGANEQAWAQNRR 167 >gi|15643441|ref|NP_228485.1| motility protein B [Thermotoga maritima MSB8] gi|4981200|gb|AAD35760.1|AE001740_6 motility protein B [Thermotoga maritima MSB8] Length = 289 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 11/118 (9%), Positives = 34/118 (28%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 ++ W Y+D +T+L+ FF+ + ++ + + + Sbjct: 4 KKREEEQKGSPQWMTTYSDMVTLLLTFFVALISMSTISPGKFQQVAVGLRIALSGRPPSV 63 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 N + + +++ + L++ +F+ S Sbjct: 64 LMGGKSINEEPLITSKRGIYQELMRLSEEYKGKITVEERDEGTLIVLKDMVFFEPGSA 121 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 7/106 (6%) Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVIS 267 + + E G LI + D F+ S+ E +L K+G++ + H+T V+ Sbjct: 91 EEYKGKITVEERDEGTLIVLKD---MVFFEPGSAKLTAEAKELLAKVGQIVIEHTTNVLE 147 Query: 268 IRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + G+ D P +I NW LS RA S + + E R+ + Sbjct: 148 VYGYADDRPPLPNSIYVSNWHLSSARAASVVNFFLTE-LKEKRMIE 192 >gi|320539138|ref|ZP_08038809.1| peptidoglycan-associated outer membrane lipoprotein [Serratia symbiotica str. Tucson] gi|320030776|gb|EFW12784.1| peptidoglycan-associated outer membrane lipoprotein [Serratia symbiotica str. Tucson] Length = 169 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 7/122 (5%) Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPF 277 + + + + + NT F + +L L ++ ++ GH D Sbjct: 51 EEQARLQMQELQKENTVYFGLDKYDVSADFAQILDAHATFLRNNASYKVTVEGHADER-- 108 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 N L RA S L GV D+IS +S + + + + NRR Sbjct: 109 -GTPEYNIALGERRANSVKMYLQGKGVLADQISIVS-YGKEKPAVLGHDAAAYAKNRRAV 166 Query: 336 IL 337 ++ Sbjct: 167 LV 168 >gi|296410000|gb|ADH15776.1| OmpP6 [Haemophilus haemolyticus] Length = 137 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 7/108 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 + + NT F E + +L L + + + G+TD N Sbjct: 34 LQQRYNTVYFGFDKYNIEGEYVQILDAHAAYLNATPAAKVLVEGNTDER---GTPEYNIA 90 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANR 332 L RA + L GV ++ +S + + + + NR Sbjct: 91 LGQRRADAVKGYLAGKGVDAGKLGTVS-YGEEKPAVLGHDEAAYSKNR 137 >gi|118591641|ref|ZP_01549037.1| OmpA/MotB [Stappia aggregata IAM 12614] gi|118435634|gb|EAV42279.1| OmpA/MotB [Stappia aggregata IAM 12614] Length = 222 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 8/112 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 +FD +S+ + L ++ +L+ + GHTDA + A+ N LS Sbjct: 112 DMEILFDYNSASLRHDQAAKLAELSRMLSQEKFKNYRFLLLGHTDA---KGSAQYNLTLS 168 Query: 289 LDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 RA + + G +SE+R+ SG +LK DP NRR+ +++ Sbjct: 169 QQRAQTIAGFVTAWGSLSEERVLA-SGMGASKLKDQGDPYGEQNRRVQLVLL 219 >gi|323497326|ref|ZP_08102344.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326] gi|323317409|gb|EGA70402.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326] Length = 203 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 7/113 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292 +F S+ P + ++++ + +A ++G+ A N LS RA Sbjct: 81 HILFANDSAEVQPVFMTQIREVADFMAEFPSTSVELQGYASKV---GRADYNLELSKQRA 137 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRL-KIASDPM-NSANRRIDILVEDRQG 343 ++ +L+ GV R++ I GF L +D ++ NR++ + +G Sbjct: 138 FAVEDLLLSYGVDSSRVN-IVGFGDTNLSLEGNDEQVHAQNRKVVASIIGHKG 189 >gi|237751470|ref|ZP_04581950.1| lipoprotein [Helicobacter bilis ATCC 43879] gi|229372836|gb|EEO23227.1| lipoprotein [Helicobacter bilis ATCC 43879] Length = 170 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 7/111 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLS 288 D T FD + ++ + + + +G+TD N L Sbjct: 62 DSLTTIYFDFDRYDIRSDMKDYVRANADFIKEKNIKAVVLQGNTDEF---GGDEYNTALG 118 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 L RA S L+ G+ + S IS + H+ + NRR DI+ Sbjct: 119 LKRAISVRDALVLQGLPRNMFSTIS-YGMHKPVCREKTAECYAKNRRTDIV 168 >gi|157959916|ref|YP_001499950.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC 700345] gi|157844916|gb|ABV85415.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345] Length = 303 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 8/112 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLS 288 +R +F SSS+ L + L ++ + GH DA N LS Sbjct: 177 RRLEFLFAPSSSLLNAAHEQDLYAVYRYLQADPSIVEVLVDGHADA---SGDHLANLVLS 233 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +RA L++ GVS ++ + +++ NRR+ + + Sbjct: 234 KERADEVVSRLIELGVSP-KMIQTRHHGTRTPVASNNSTQGRELNRRVTLRL 284 >gi|76789924|gb|ABA55070.1| OmpA family protein [Riemerella anatipestifer] Length = 384 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 9/111 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289 ++ FD S E V+ + + + + GHTD A N LS Sbjct: 276 RQFVVYFDFDRSDLTAEARSVVTQAANYAKSGAPTRVLVVGHTDT---SGNAAYNQGLSN 332 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR--IDI 336 RA + L+ GV+ + + G + A+ NRR +DI Sbjct: 333 RRARTVADALVAQGVNGG-VISLDGKGETQPAKATGDGVREPLNRRATVDI 382 >gi|188534419|ref|YP_001908216.1| peptidoglycan-associated outer membrane lipoprotein [Erwinia tasmaniensis Et1/99] gi|188029461|emb|CAO97338.1| Peptidoglycan-associated lipoprotein Pal, OmpA family of porins [Erwinia tasmaniensis Et1/99] Length = 172 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 7/138 (5%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L G + G + + + + + + N F + +L L + Sbjct: 38 LDGSANGGMNSGNMSSDEQARLQMQELQKNNIVYFGLDKYDIQSDFAQMLDAHATFLRSN 97 Query: 263 TEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 ++ GH D N L R+ + L GV+ED+IS +S + + Sbjct: 98 PSYKVTVEGHADER---GTPEYNIALGERRSSAVKMYLQGKGVAEDQISIVS-YGKEKPA 153 Query: 322 I--ASDPMNSANRRIDIL 337 + + + NRR ++ Sbjct: 154 VLGHDESAYAKNRRAVLV 171 >gi|114570965|ref|YP_757645.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10] gi|114341427|gb|ABI66707.1| OmpA/MotB domain protein [Maricaulis maris MCS10] Length = 173 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 + + E L++ LA + G+ D N L R Sbjct: 63 DRVFYGLDRHDLSDEARATLRRQAAWLASYPGTRILVAGNCDER---GTREYNLALGARR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANR 332 A +A L+ GV RIS S + R +S+ + NR Sbjct: 120 ASAARTYLISQGVDPSRISTTS-YGKERPSCSQSSETCWAVNR 161 >gi|111219587|ref|YP_710381.1| lipoprotein [Frankia alni ACN14a] gi|111147119|emb|CAJ58764.1| hypothetical protein; putative lipoprotein [Frankia alni ACN14a] Length = 168 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 47/163 (28%), Gaps = 12/163 (7%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 A ++ + + + D V T + + +F S+ Sbjct: 6 AAAPVPDDEVRAAVHTLRTDDAVRPIDLDRSVVELRTEEHRGAETTLVLSADVLFAFDSA 65 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + + LA S I + G+TD+ N LS RA + +L + Sbjct: 66 ELTATARRQIADVAGRLAGSAAPIRVDGYTDSF---GTPAYNVILSQRRASAVADLL-RP 121 Query: 303 GVSEDRISKISGFAHHRLKI-------ASDPM-NSANRRIDIL 337 + G + DP + NRR+ I Sbjct: 122 AAPAGFLVSARGHGSADPIAHDTLPDGSDDPAGRAINRRVTIT 164 >gi|90409122|ref|ZP_01217243.1| outer membrane protein A [Psychromonas sp. CNPT3] gi|90309773|gb|EAS37937.1| outer membrane protein A [Psychromonas sp. CNPT3] Length = 318 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 9/117 (7%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARD 283 ++ + ++ +FD + + L E L L + + G+TD + Sbjct: 201 IVYLETIQSRILFDFAQTDLLLE--HDLDIAITRLTTYKKATVVLTGYTDNT---GKETF 255 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 N +LS R S + L+ GV +I+++ I +D NRR+DIL+ Sbjct: 256 NLQLSKQRVQSIKKTLLDRGVQASQITEVY-KGESDPIIGNDSREHRHLNRRVDILL 311 >gi|15602451|ref|NP_245523.1| Plp4 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720855|gb|AAK02670.1| Plp4 [Pasteurella multocida subsp. multocida str. Pm70] Length = 272 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 14/114 (12%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + + V+ + L S + + + G TD N +LS R Sbjct: 138 GDFLFDFNKDSLTAKGKEVVDSVATQLKASDAKEVKVAGFTDRL---GSEAYNLKLSQRR 194 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDIL 337 A L++ GV+ + I + G+ + A D + A NRR++I Sbjct: 195 ADRVKARLIEQGVAAN-IHAV-GYGKAQQVKACDDVQGAALRDCLRPNRRVEIT 246 >gi|300726777|ref|ZP_07060207.1| immunogenic 75 kDa protein PG4 [Prevotella bryantii B14] gi|299775890|gb|EFI72470.1| immunogenic 75 kDa protein PG4 [Prevotella bryantii B14] Length = 689 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 34/145 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I+ + ++ + E+ L ++ +L + I + H D ++ N Sbjct: 512 ITAPVLIDNIFYEFDKANLTSESTKALDELVNLLNENPNVTIELSAHCD---YKGSEDYN 568 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFA-------------HHRLKIASD--PMN- 328 +LS RA S L+ G+++DR++ + G+ ++ +D Sbjct: 569 KQLSQRRAESVVNYLIAKGIAKDRLTPV-GYGKDKPKTIKKKLTEKYKWLKENDVLTEEY 627 Query: 329 -------------SANRRIDILVED 340 NRR + +V Sbjct: 628 IKKLSKEEQEICNQLNRRTEFIVLR 652 >gi|83647690|ref|YP_436125.1| outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] gi|83635733|gb|ABC31700.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] Length = 274 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 74/243 (30%), Gaps = 18/243 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 S + S + + +NN ++ + D K+ Sbjct: 28 SSQNLTPEASPSEDFAVKSAAHNVEVADNNRDVSTSEADELYSYGLSQADDNPEITTSKA 87 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + + + ++ L + ++ + E Sbjct: 88 AETINAAGTPTDSTTTEVTSASTTEGNDMTVL--VLDDATAAALEKEYGGANQFAGVEPP 145 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRN 279 + ++ + S E + L++ + L+ I GHTDA Sbjct: 146 QPRVI----------FYPLEKSNLNQEDMAALKQHADFLSVHPNYQIQIHGHTDA---SG 192 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 A N RLS +RA L+ +G +++ ++ G+ + + NRR++++ Sbjct: 193 QATYNERLSEERALRVADYLLNNGARPEQV-EVFGWGSREPLLT-SSHHEKNRRVELIYL 250 Query: 340 DRQ 342 + Q Sbjct: 251 NDQ 253 >gi|313206073|ref|YP_004045250.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868] gi|312445389|gb|ADQ81744.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868] gi|325336486|gb|ADZ12760.1| OmpA2 [Riemerella anatipestifer RA-GD] Length = 473 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284 + F +S + P++ L ++ + G TD A N Sbjct: 355 EVNKNFEGIEFALNSDVIRPQSFGKLDNAANIIKGMNTSKQYLVIGATDTR---GSASYN 411 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--------DPMNSANRRI 334 +LS RA + + L+ GVS + G LK + N ANRR+ Sbjct: 412 KKLSQRRADAVVKYLVNKGVSTS-MLVAEGRGQEDLKYPECNPATKCPEWKNEANRRV 468 >gi|229591316|ref|YP_002873435.1| putative phosphate-related ABC transporter exported protein [Pseudomonas fluorescens SBW25] gi|229363182|emb|CAY50235.1| putative phosphate-related ABC transport system, exported protein [Pseudomonas fluorescens SBW25] Length = 443 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 89/299 (29%), Gaps = 20/299 (6%) Query: 54 INATDDDTKKAI----EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 +N + + + + G D+Q+ + ++ + + + + Sbjct: 150 LNTLNTEQLAQLFNGEISTWETVGGVGGPIHVYARDDQSGTYDTFKDLVLRLRGKPLVPS 209 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD-----LCKSTDLE 164 + + Q + F + + DS+ + L Sbjct: 210 AKRFESSEQLSDAVSQDPQGIGFIGLPYVRQAKAVAIVDGDSQPMLPLNSLIATEDYPLS 269 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + + + ++ + + Q + + A ++ I Sbjct: 270 RRLFFYLPPSGHNPWAKALVDFTQSSKGQAIVAASGFIAQQVQAMDVEPRASMPEGYQTI 329 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIA 281 F++ S+ + LQ++ + + +++ G DA A Sbjct: 330 AREAQRLTVNFRFEEGSASLDNKARQDLQRVVAYIKSHDKLDKQVTLVGFGDAKNDPQRA 389 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 LS RA + + L+KSGV + +I GF A+ NRR+++ V Sbjct: 390 AL---LSKLRAMAVRRELVKSGVV---LREIRGFGAQMPVAANTADEGRIKNRRVEVWV 442 >gi|149198155|ref|ZP_01875202.1| OmpA/MotB [Lentisphaera araneosa HTCC2155] gi|149138757|gb|EDM27163.1| OmpA/MotB [Lentisphaera araneosa HTCC2155] Length = 199 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 48/115 (41%), Gaps = 9/115 (7%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 I + F +S+ + L+ + + +A + + + I GHTD + + N Sbjct: 85 IHHNFSPVYFGFNSASIDKSNLRPLKILAKYIADNKDFHLVISGHTDE---KGSEQYNRI 141 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRI--DIL 337 LS RA + + L+ +++I I G + D ++ NRR +I+ Sbjct: 142 LSEKRALAVREKLISFYDIKNKIHTI-GMGEEQPASLGDSIKDHAKNRRAQFEII 195 >gi|72162680|ref|YP_290337.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Thermobifida fusca YX] gi|71916412|gb|AAZ56314.1| similar to Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Thermobifida fusca YX] Length = 356 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 74/258 (28%), Gaps = 21/258 (8%) Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 + + +P + ID K + LK+ S Sbjct: 114 LAEFGDPNAEPTTPNGVSLIDMQNNKRHMPLKLTDGKTCHCSDWSGQKDLSPGESIDIWA 173 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + D E + T I E P +A R I + Sbjct: 174 AYPAPPEDVELMTVMTPVTPDFLDIPITEAASPDPDIVNTPVAEPRILDFWAFQDDIDGS 233 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AH 261 S + +L + +FD + S L+ + E + A Sbjct: 234 SSRSETGDTTSIML---------------SSDVLFDLNESTLTDAADETLRAVAEEIDAS 278 Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 ST + I GHTD + N LSLDRA + + L + + +++G Sbjct: 279 STTTVKIDGHTDNT---GNDAINNPLSLDRAKAVEKRLKELITRDGITFEVAGHGSADPV 335 Query: 322 IASDPM--NSANRRIDIL 337 + + NRR+ I Sbjct: 336 ADNGTEEGRAKNRRVTIT 353 >gi|167950041|ref|ZP_02537115.1| flagellar motor protein MotB [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 76 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 19/48 (39%) Query: 31 GSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +W +AD M++LM FF+++ D K + + Sbjct: 7 PAWLATFADLMSLLMCFFVLLLSFATIDAVRFKKMAESMKDAFGVQRE 54 >gi|226227347|ref|YP_002761453.1| putative peptidoglycan-associated lipoprotein [Gemmatimonas aurantiaca T-27] gi|226090538|dbj|BAH38983.1| putative peptidoglycan-associated lipoprotein [Gemmatimonas aurantiaca T-27] Length = 185 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T F+ + E L +L + I I GH D N L R Sbjct: 70 ETIYFEYDADELRDEARASLDAKLAILNANPGLRIRIAGHCDER---GSDEYNIALGRRR 126 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 + +A + L GV RI S F R ++ S NRR + + Sbjct: 127 SEAAKRYLTDRGVDASRIET-SSFGRERPAVSGTSEESWSKNRRDEFEI 174 >gi|330752332|emb|CBL87286.1| protein with similarity to outer membrane OmpA family protein [uncultured Flavobacteria bacterium] Length = 292 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIAR 282 + + ++ Q F +++ LP++I L+++ + L H + +RGH + Sbjct: 173 VEVGMVYQLKEIFFIPATAQYLPKSIKELERLKQFLLNHEVLKVQVRGHVNGPAQTKPEF 232 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---SDPMNSANRRIDILVE 339 LS RA + Q L+ +GV E+R+ + G ++ +++ + + NRR++I++ Sbjct: 233 Y-QELSDARAKAIKQFLVGNGVGEERVDE-KGMSNFQMRYSSPKTAFEAGENRRVEIIIT 290 Query: 340 D 340 Sbjct: 291 A 291 >gi|301167893|emb|CBW27478.1| putative sodium-driven polar flagellar protein [Bacteriovorax marinus SJ] Length = 288 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 95/274 (34%), Gaps = 18/274 (6%) Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 G Q + + L + V L + + + E + + Sbjct: 9 GGGEESPQAEETKCPECPPGLPGWMATFSDLVTLLLTFFVLLLSFAKTETAKYEAALGSI 68 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ-DLAKK 198 + ++ + E + D I+ +E P+ + + K + + ++ Sbjct: 69 RDAFGGNVLKHGEVIQRGKSPDDSPTMIDSQEPVRPFPIDFLTMEGILDKHEINRESDEE 128 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE--TIVVLQKIG 256 + + + L N+ V GI + + D+ +F S E +I V ++ Sbjct: 129 LKTMKNDLYEYNLSDSVNIYEMPEGIKVKVKDK---ILFRYGSLRIANEQVSIEVYTRLV 185 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNW---RLSLDRAYSAYQVLMKSGVSEDRISKIS 313 +L + + ++G++ N LS RA + + L++ GV D+IS + Sbjct: 186 RLLTNKDWSVFVQGYSSRGEVSTEDGKNMDAFELSAARASAVTRSLIRRGVKPDQISTVF 245 Query: 314 GFAHHRLKIASDPMNSA------NRRIDILVEDR 341 + R + P S +RR+D ++ R Sbjct: 246 -YGDIRP--ENIPGRSQTEIERASRRVDFILRKR 276 >gi|261252913|ref|ZP_05945486.1| outer membrane protein [Vibrio orientalis CIP 102891] gi|260936304|gb|EEX92293.1| outer membrane protein [Vibrio orientalis CIP 102891] Length = 203 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 13/169 (7%) Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG-----VLFETTRTGILISII 229 + PL E K + + + G++ + + G I Sbjct: 16 VAPLKAEDAYEYKETPKPNQVDDLLDEDKDGVINARDLCPQTPAKADIDNDGCGTYIKTE 75 Query: 230 DQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRL 287 ++ + +F SSI P + ++++ E L I ++G+ A N +L Sbjct: 76 EEMDLHILFQNDSSIIQPMFLAQIREMSEFLEAYPSTSIELQGYASKV---GKAEYNQKL 132 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRI 334 S RA + L+ +GVS R+ +I GF RL + ++ NR++ Sbjct: 133 SERRAEAVEAALLDNGVSSSRV-RIVGFGDTRLDELGDDEVSHAMNRKV 180 >gi|167586272|ref|ZP_02378660.1| peptidoglycan-associated lipoprotein [Burkholderia ubonensis Bu] Length = 169 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 67 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 123 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 + + GV++ ++ +S + + A + + NRR D++ Sbjct: 124 RRAMALLGVADSQMEAVS-LGKEKPQAAGHDEASWAQNRRSDLV 166 >gi|107100492|ref|ZP_01364410.1| hypothetical protein PaerPA_01001517 [Pseudomonas aeruginosa PACS2] Length = 281 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 74/270 (27%), Gaps = 11/270 (4%) Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 T + P E++S + + + + F Sbjct: 9 FQTQDASSQPAKAPAEQASSHSWWPFGKDDGQTVAKQATEQKAEAEHVGSSHWWWPFGKD 68 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + K + + + E + S K + + Sbjct: 69 EGGRDVAAKAAEQKAEIAAAKKEVAAAAEPKAANPWWWPFGASSASKASGKPALVQQKVT 128 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + L E +++ F+ L + Sbjct: 129 KEWLDAHEKALREAIAGSEFTLERRDNALIVIAPADY---SFNPKRHTMLMPITLNPLGK 185 Query: 256 GEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 +A I + GHTD++ N +LS +RA S + SG+ D++ ++ Sbjct: 186 VAKMAQADPQSGILVLGHTDST---GSKAVNDKLSFERAQSVAAIFRLSGLKGDQL-RLK 241 Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341 G + + + NRR+++L R Sbjct: 242 GVGSDMPRADNASAAGRAQNRRVEVLYTQR 271 >gi|302558689|ref|ZP_07311031.1| secreted protein [Streptomyces griseoflavus Tu4000] gi|302476307|gb|EFL39400.1| secreted protein [Streptomyces griseoflavus Tu4000] Length = 215 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 60/205 (29%), Gaps = 10/205 (4%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + +L + + + P ++ DL Sbjct: 8 PAPPRLALVLSAATVMVAANLYGAVVAHADDGPGVPPGTEASASAPVEVDPNDPDLKLPE 67 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIID----QRNTPMFDKSSSIPLPETIVVLQKI 255 +TL+ +I + V ++ + D + +F K S+ E + I Sbjct: 68 GATLTEPKVLDIKQIVEDKSGDERREDTNSDVTFALQAEVLFGKDSAKLGAEAKARIATI 127 Query: 256 GEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + + + + G TD + LS RA + VL + + ++ G Sbjct: 128 AGEIKTQNATKVRVFGFTDNL---GSSAHGDVLSRQRANAVQAVLGRELSDANITYEVRG 184 Query: 315 FAHHRLKIASDPMNSA--NRRIDIL 337 + + NRR++I Sbjct: 185 YGEQYPIADNSTEAGRKKNRRVEIT 209 >gi|116048976|ref|YP_792222.1| hypothetical protein PA14_50810 [Pseudomonas aeruginosa UCBPP-PA14] gi|296390590|ref|ZP_06880065.1| hypothetical protein PaerPAb_20651 [Pseudomonas aeruginosa PAb1] gi|115584197|gb|ABJ10212.1| probable outer membrane protein precursor [Pseudomonas aeruginosa UCBPP-PA14] Length = 293 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 74/270 (27%), Gaps = 11/270 (4%) Query: 76 LMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLS 135 T + P E++S + + + + F Sbjct: 21 FQTQDASSQPAKAPAEQASSHSWWPFGKDDGQTVAKQATEQKAEAEHVGSSHWWWPFGKD 80 Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + K + + + E + S K + + Sbjct: 81 EGGRDVAAKAAEQKAEIAAAKKEVAAAAEPKAANPWWWPFGASSASKASGKPALVQQKVT 140 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + L E +++ F+ L + Sbjct: 141 KEWLDTHEKALREAIAGSEFTLERRDNALIVIAPADY---SFNPKRHTMLMPITLNPLGK 197 Query: 256 GEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 +A I + GHTD++ N +LS +RA S + SG+ D++ ++ Sbjct: 198 VAKMAQADPQSGILVLGHTDST---GSKAVNDKLSFERAQSVAAIFRLSGLKGDQL-RLK 253 Query: 314 GFAHHRLKIASDPM--NSANRRIDILVEDR 341 G + + + NRR+++L R Sbjct: 254 GVGSDMPRADNASAAGRAQNRRVEVLYTQR 283 >gi|260905077|ref|ZP_05913399.1| flagellar motor protein [Brevibacterium linens BL2] Length = 228 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 71/189 (37%), Gaps = 28/189 (14%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + ++ ++ S L + D +G+ ++ G +ISI + Sbjct: 21 QAQKDFQAQTDDLSEQIEKSSKAENIRKSMLDEIQKDLESEGIEVIVSQNGSVISIPNDL 80 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA---------HSTEVISIRGHTDASPFRNIARD 283 FD S + IG ++A + + + GHTD + ++ + Sbjct: 81 LG--FDSGSYDIKEKYEAKSLTIGTIIAREIEEHDGEEFLDTVFVEGHTDNAKYQGLEGT 138 Query: 284 -NWRLSLDRAYSAYQVLMKSGVSEDR------------ISKISGFAHHRLKIASDP---M 327 NW LS RA S ++ L + + D+ + +SG++ R A+ Sbjct: 139 GNWGLSTFRAISLWK-LWEEELPSDQQLETMQGPEGQPLFSVSGYSDTRPVNANQSTDLG 197 Query: 328 NSANRRIDI 336 +ANRRIDI Sbjct: 198 AAANRRIDI 206 >gi|50120313|ref|YP_049480.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium atrosepticum SCRI1043] gi|49610839|emb|CAG74284.1| peptidoglycan-associated lipoprotein precursor [Pectobacterium atrosepticum SCRI1043] Length = 169 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 7/117 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 + + + + N F E +L L + +I GH D Sbjct: 56 LQMQELQRNNIVYFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTIEGHADER---GTPE 112 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 N L RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 113 YNIALGERRANAVQMYLQGKGVSSDQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 168 >gi|294631150|ref|ZP_06709710.1| secreted protein [Streptomyces sp. e14] gi|292834483|gb|EFF92832.1| secreted protein [Streptomyces sp. e14] Length = 215 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 60/210 (28%), Gaps = 10/210 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + + + +L + + + P ++ D Sbjct: 3 AATMTHTRPRLTLALTAATVMVAAQLYGAAAARADGGPSEPPGTEASASAPVQVDPNDPD 62 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIID----QRNTPMFDKSSSIPLPETIV 250 L +TL+ +I V + + D + +F K S+ + Sbjct: 63 LKLPEGATLAAPKVLDIKSVVEDQGGEERREDTNTDVTFALQAEVLFPKDSAKLSDQAKS 122 Query: 251 VLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 + I + + + + G TD LS RA + VL + D Sbjct: 123 RIDAIAQEIKKQHATQVRVFGFTDNL---GSHEHGVVLSKQRANAVQDVLSQELNDPDIT 179 Query: 310 SKISGFAHHRLKIASDPMNSA--NRRIDIL 337 + G+A + + NRR+++ Sbjct: 180 FDVRGYAEDYPIADNSTEDGRKKNRRVEVT 209 >gi|260768773|ref|ZP_05877707.1| putative sodium-type flagellar protein MotY precursor [Vibrio furnissii CIP 102972] gi|260616803|gb|EEX41988.1| putative sodium-type flagellar protein MotY precursor [Vibrio furnissii CIP 102972] Length = 254 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEV--LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F L+ I E+ + + I GH+D+ N +S RA Sbjct: 150 FQSGVLALTQNQRSQLEAISELVLFDPKIKTVRITGHSDS---HGDTVVNLSVSRRRADD 206 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 +M +GV + + +I G + NRR++I + R Sbjct: 207 VAYWMMMAGVPTE-MMEIRGQGGRYPVANNATEEGRLANRRVEIELVRR 254 >gi|304397573|ref|ZP_07379450.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB] gi|304354745|gb|EFM19115.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB] Length = 405 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 58/152 (38%), Gaps = 14/152 (9%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + L DL ++++ ++ + V + ++I +F + ++ P Sbjct: 251 QALLDLRQRLNDVIAAGQLE-----VSDGAFGSKVII-----PADKLFAEQGTVINPVGR 300 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPF-RNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 +L ++ + I + TD P + ++ S RA + Q+L +++ Sbjct: 301 ALLARVSNAMKDVKGTILVSVFTDDHPVDNSRFASSYEFSFARARTITQLLQVQ-LNDGH 359 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + G + +D + NRR++I + Sbjct: 360 TVRSEGRGDSDPLLPNDSSENRTRNRRVEITL 391 >gi|224531999|ref|ZP_03672631.1| outer membrane protein [Borrelia valaisiana VS116] gi|224511464|gb|EEF81870.1| outer membrane protein [Borrelia valaisiana VS116] Length = 389 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 10/147 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I + + + + +K + E GI +S + F S L + L I Sbjct: 250 DNFIETEVEHYLQEKQIKSINVEKNNKGINLSFDIE-----FYPDSFQILQKEYKKLDII 304 Query: 256 GEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 E+L + I GHT+ + + LS RA + L+K V G Sbjct: 305 AELLEKFKKNNLLIEGHTEHF---GLEEEMHELSEKRARAIGNYLIKMRVKNKDQILFKG 361 Query: 315 FAHHRLKIA-SDPMNSANRRIDILVED 340 + + K S P+ + NRR++I + + Sbjct: 362 WGSKKPKYPKSSPLKAKNRRVEITILN 388 >gi|225159124|ref|ZP_03725430.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2] gi|224802279|gb|EEG20545.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2] Length = 199 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 38/113 (33%), Gaps = 6/113 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNW 285 I D + F S E +Q L + + G D A N Sbjct: 88 QIRDAVQSVYFAFDQSAVRQEERAKIQDAQNYLNAHPDQRVLLEGRCDWR---GTAEYNL 144 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDIL 337 L RA S Q L G++ +RI +I +D + +RR+D + Sbjct: 145 GLGDRRANSVRQYLQDLGIAANRI-EILSKGDLEAVENADAATAAKDRRVDFV 196 >gi|227327557|ref|ZP_03831581.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium carotovorum subsp. carotovorum WPP14] gi|253687644|ref|YP_003016834.1| peptidoglycan-associated lipoprotein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261822329|ref|YP_003260435.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium wasabiae WPP163] gi|251754222|gb|ACT12298.1| peptidoglycan-associated lipoprotein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261606342|gb|ACX88828.1| peptidoglycan-associated lipoprotein [Pectobacterium wasabiae WPP163] Length = 169 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 7/117 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR 282 + + + + N F E +L L + +I GH D Sbjct: 56 LQMQELQRNNIVYFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTIEGHADER---GTPE 112 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 N L RA + L GVS D+IS +S + + + + NRR ++ Sbjct: 113 YNIALGERRANAVQMYLQGKGVSSDQISIVS-YGKEKPAVLGHDEAAYAKNRRAVLV 168 >gi|312891928|ref|ZP_07751431.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] gi|311295559|gb|EFQ72725.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] Length = 571 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 12/110 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +D S P+ L K+ VL I + D+ N LS RA +A Sbjct: 461 YDLDKSFIRPDAAAELDKLSVVLKEHPALKIELSSFADSR---ASYSYNLALSRRRATAA 517 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILV 338 L+ GVS R+ +G+ L S+ + NRR + + Sbjct: 518 VNYLVNKGVSISRVLA-NGYGKTHLVNQCADHVKCSEAEHQLNRRTEFKL 566 >gi|27377528|ref|NP_769057.1| hypothetical protein bll2417 [Bradyrhizobium japonicum USDA 110] gi|27350672|dbj|BAC47682.1| bll2417 [Bradyrhizobium japonicum USDA 110] Length = 213 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 70/202 (34%), Gaps = 18/202 (8%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + + + + K L + + Sbjct: 17 AALSMTAGLALAGDNNISSDKILDALKPKPVTRGLSAGPQADPAVQAKEATFLNTVRNRS 76 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + +LS + I + + + + I FD +S+ ++ +Q +G+ L Sbjct: 77 TRSLSTGEREQIAE-LAATKPKIDLEIQ---------FDYNSADIAKTSVPSVQALGKAL 126 Query: 260 AH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGF 315 + + GHTDA N LS RA + + L+++ G++ + + G+ Sbjct: 127 SDPALKGSTFVVAGHTDAI---GGEEYNQGLSERRADTIKKYLVQNYGLNGTDLVTV-GY 182 Query: 316 AHHRLKIASDPMNSANRRIDIL 337 +LK ++ + NRR+ ++ Sbjct: 183 GKTKLKDTANGADPINRRVQVV 204 >gi|315126277|ref|YP_004068280.1| required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA [Pseudoalteromonas sp. SM9913] gi|315014791|gb|ADT68129.1| required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA [Pseudoalteromonas sp. SM9913] Length = 179 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 Q FD + + +L+ E L + V I GH D N L Sbjct: 73 QEQIIYFDFDKATVESKYADLLRAHAEFLVKNPSVKVLIEGHADER---GTPEYNIALGE 129 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 R + + L GVS ++ + + + + + + NRR ++ Sbjct: 130 HRGQAVEKYLQSLGVSASQM-SVVSYGEEKPMVKTRTEAAFAKNRRAVLV 178 >gi|254248380|ref|ZP_04941700.1| Outer membrane protein [Burkholderia cenocepacia PC184] gi|124874881|gb|EAY64871.1| Outer membrane protein [Burkholderia cenocepacia PC184] Length = 187 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD PE +LQ + L I+G+TD + N L R+ + Sbjct: 86 FDFDQYSVKPEFQSLLQAHADYLRSHPARRVLIQGNTDER---GTSEYNLALGQRRSQAV 142 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDIL 337 L GV ++ +S + + NRR D++ Sbjct: 143 ASTLETLGVPATQLEAVS-LGKEKPVALGHDEEAWTQNRRADLV 185 >gi|229523201|ref|ZP_04412608.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae TM 11079-80] gi|229339564|gb|EEO04579.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae TM 11079-80] Length = 294 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 90/298 (30%), Gaps = 19/298 (6%) Query: 51 MWIINATDDDTKKAI-EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 ++ I+ A+ +Y ++ + E K Sbjct: 9 LFAISTLSASVASALEVRYVATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKI 68 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 ++D ++ + + + + + ++ +++ Sbjct: 69 NLDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSE 128 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 E P S + + ++ + +SS L + + IS Sbjct: 129 LEKGRYPTFSYQDWQSRDQRIEVA-----LSSVLFQQPYSEFSDCISKLLPYSFEDISFT 183 Query: 230 DQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWR 286 +D+ S + L +I E + ++ ++ + +TD++ N + Sbjct: 184 ILH----YDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNS---QN 236 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 LS RA + G+ EDRI ++ G+ R + NRR+ I + Q Sbjct: 237 LSEQRAEVLREYFKSIGLPEDRI-QVQGYGKRRPIDDNASPIGKDKNRRVVISLGRTQ 293 >gi|208435023|ref|YP_002266689.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori G27] gi|208432952|gb|ACI27823.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori G27] Length = 179 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 40/117 (34%), Gaps = 6/117 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 67 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 L + R S L+ GV +D I IS F + K NRR+D+ + Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKLMK 179 >gi|148253708|ref|YP_001238293.1| hypothetical protein BBta_2207 [Bradyrhizobium sp. BTAi1] gi|146405881|gb|ABQ34387.1| putative outer membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 216 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 68/165 (41%), Gaps = 15/165 (9%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 P + +I A + K+ + + L + T+ I + I Sbjct: 54 PQAAPQIDATAQAKQSTFIDSMRNRKTRSLSLGEREQLAEIAATKPKIDLEIQ------- 106 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD +S+ +I +Q++G+ L+ + GHTD N LS RA Sbjct: 107 FDYNSAAISKTSIQAVQELGKALSDPNLKGSTFMVAGHTDGI---GSDGFNQDLSERRAD 163 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + + L++ G++ + + G+ +LK A++P + NRR+ ++ Sbjct: 164 TLKRYLVEKFGLAGQDLVTV-GYGKTKLKDAANPADPVNRRVQVV 207 >gi|310818068|ref|YP_003950426.1| chemotaxis MotB protein [Stigmatella aurantiaca DW4/3-1] gi|309391140|gb|ADO68599.1| chemotaxis MotB protein [Stigmatella aurantiaca DW4/3-1] Length = 284 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 14/213 (6%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + +Q + + + + + + ++ LP ++ + R + Sbjct: 47 AQLEQEANESEARVAELQALRVSMERRLRVLEQQQQGATSLPGDLRKARELGTQMVRRET 106 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 +++ L + T + +F+ S P VL + Sbjct: 107 ARLNLTAKLKEELTRGDAWLDAIGTEALRLE-----LSERLLFEPGQSNLTPRGTEVLAR 161 Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIARD---NWRLSLDRAYSAYQVLMK--SGVSEDR 308 G VLA + HTD P A +W LS RA + + L + + ++++R Sbjct: 162 AGAVLAAVEGHTVEVAAHTDELPVPAEAETEGTSWELSTARAATVVRALHEGPARLAQER 221 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 +S +G A R + SD NRR+ +++ Sbjct: 222 LSA-TGHASFRPVVPSDSPVNRLRNRRVTLMLR 253 >gi|77462481|ref|YP_351985.1| OmpA/MotB family outer membrane protein [Rhodobacter sphaeroides 2.4.1] gi|77386899|gb|ABA78084.1| Outer membrane protein, OmpA/MotB family [Rhodobacter sphaeroides 2.4.1] Length = 701 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 73/234 (31%), Gaps = 13/234 (5%) Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + GS + + + + + I+ E+Y Sbjct: 462 RPGSEVVTQSFDDGSTRSVVTRADGTQIVTIRDASGRVLRRTAVDGQGREVMLIDDLESY 521 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID--- 230 +S+ A + + L ++ + R + + Sbjct: 522 QAVDVSRLPEPAPVYSFVQTRDQRDLRQALEQTRTRDLDRTYSLRQIREYREVRALAPAI 581 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285 + FD S+ P+ L +G+ +A EV I GHTDA A N Sbjct: 582 DVDQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAV---GDAASNL 638 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 LS RA S L + V + + + G+ L++ SD NRR+ + + Sbjct: 639 ALSDRRAESVALALTEYFDVPPENMV-VQGYGEEDLRVDSDGPEQRNRRVAVRL 691 >gi|126461359|ref|YP_001042473.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126103023|gb|ABN75701.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 701 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 73/234 (31%), Gaps = 13/234 (5%) Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + GS + + + + + I+ E+Y Sbjct: 462 RPGSEVVTQSFDDGSTRSVVTRADGTQIVTIRDASGRVLRRTAVDGQGREVMLIDDLESY 521 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID--- 230 +S+ A + + L ++ + R + + Sbjct: 522 QAVDVSRLPEPAPVYSFVQTRDERDLRQALEQTRTRDLDRTYSLRQIREYREVRALAPAI 581 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285 + FD S+ P+ L +G+ +A EV I GHTDA A N Sbjct: 582 DVDQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAV---GDAASNL 638 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 LS RA S L + V + + + G+ L++ SD NRR+ + + Sbjct: 639 ALSDRRAESVALALTEYFDVPPENMV-VQGYGEEDLRVDSDGPEQRNRRVAVRL 691 >gi|259416355|ref|ZP_05740275.1| outer membrane protein, OmpA/MotB family [Silicibacter sp. TrichCH4B] gi|259347794|gb|EEW59571.1| outer membrane protein, OmpA/MotB family [Silicibacter sp. TrichCH4B] Length = 624 Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 73/259 (28%), Gaps = 10/259 (3%) Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 ++ E+ Q ++ + D + + ++K + + ++ Sbjct: 359 SGDRAVVEQDGQYRVIKNDDALLRQPGSNVKTYQFKDGSTRTVVTREDGIEVETIRAADG 418 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 + + D + K LP S + + + Sbjct: 419 RVLRRSKTLTDGRTVVLFDDTQEAEKVVVTELPKASPNRRAFSTDGSISAEDLAAALAAQ 478 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 D + + F+ SS+ PE L +G L Sbjct: 479 QPEGIDRRFSLAQVRNIDAVRRLVPEINVDKVTFETGSSVIRPEQAEELTDLGNALRQMV 538 Query: 264 EV-----ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317 + I GHTDA A N LS RA + L + V + + I G+ Sbjct: 539 DTNPTEVFLIEGHTDAV---GAATYNLALSDRRAETVALALTEYFDVPPENMV-IQGYGE 594 Query: 318 HRLKIASDPMNSANRRIDI 336 L + ANRR+ + Sbjct: 595 SDLAVPVLDAERANRRVTV 613 >gi|171319575|ref|ZP_02908672.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5] gi|171095186|gb|EDT40181.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5] Length = 133 Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD PE +LQ + L + I+G+TD + N L R+ + Sbjct: 32 FDFDQYSVKPEFQSLLQSHADYLRNHPSRRVLIQGNTDER---GTSEYNLALGQRRSQAV 88 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 L GV ++ +S + + + NRR D++ Sbjct: 89 MSALETLGVQATQLEAVS-LGKEKPVALGHDEDSWAQNRRADLV 131 >gi|83644283|ref|YP_432718.1| outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] gi|83632326|gb|ABC28293.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Hahella chejuensis KCTC 2396] Length = 169 Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS P LQ+ + + + + GH D + A N +LS DRA S Sbjct: 64 FAFDSSKIGPGEQSDLQQWASYIQEGAYNRVEVHGHADDT---GSADYNRKLSADRANST 120 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 Q L VS + + + NRR++I+ Sbjct: 121 VQALRNL-VSGQVDFVVVPHGEEQPLAENSDEQGRQLNRRVEIV 163 >gi|295097172|emb|CBK86262.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 146 Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 8/110 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +FDK+ + PE+ +Q + LA + + GHTD N LSL R Sbjct: 38 DKILFDKNDARLRPESETQIQTMASRLAATGLNHARMDGHTDNY---GEESYNEALSLKR 94 Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 A K + + ++ G ++ + NRR+ +++ Sbjct: 95 ANVVADAWAKGANIPRSNLTT-RGLGKKYPISSNRTAQGRAENRRVAVVI 143 >gi|239906204|ref|YP_002952943.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1] gi|239796068|dbj|BAH75057.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1] Length = 250 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 26/54 (48%), Positives = 32/54 (59%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + SWK+ YADF+T +MAFFL+MWIIN T K +EQYF K A Sbjct: 19 PKAHGSSWKVAYADFVTAMMAFFLLMWIINMVPPATLKQLEQYFKDEPKPAQGA 72 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 61/185 (32%), Gaps = 10/185 (5%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 D K + + +A + ++ G+ + Sbjct: 63 KDEPKPAQGALFSPDATERQRAAALNRDDAMRYTIAMRFKKIITEDPFLKNSSGISSDDV 122 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA-SPFRN 279 + + N +F S+ + ++ ++ +V+ + IRGH DA + Sbjct: 123 GVLLRLQ-----NGMLFAPGSAELTEQAKKLMAEVVDVMKTYNVFLIIRGHADAAEAAKG 177 Query: 280 IARDNWRLSL-DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 NW LS A +A V+ G+ R+ ++ + R + + +ANRR++ Sbjct: 178 HFASNWELSGARAAAAARAVIAGGGIQASRVRAVA-YGDSRPLMPETNPEAAAANRRVEF 236 Query: 337 LVEDR 341 Sbjct: 237 YFHRP 241 >gi|149186172|ref|ZP_01864486.1| putative outer membrane lipoprotein [Erythrobacter sp. SD-21] gi|148830203|gb|EDL48640.1| putative outer membrane lipoprotein [Erythrobacter sp. SD-21] Length = 245 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 5/105 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++S+ LP + ++L ++ L + +I+I GHT+ N LS+DRA Sbjct: 130 FQEASAALLPASRILLDEVAAALEPCSGAIIAITGHTNK---SGSEAANLALSMDRARVV 186 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + L++ G+ + + G P + ANRRI+ V Sbjct: 187 REALVRRGIPRSSL-RARGMGSSEPAERLKPEDPANRRIEFSVIR 230 >gi|311745704|ref|ZP_07719489.1| putative OmpA family protein [Algoriphagus sp. PR1] gi|126575146|gb|EAZ79496.1| putative OmpA family protein [Algoriphagus sp. PR1] Length = 430 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 I + + SS PL + + L + V I+G+ D N + Sbjct: 321 INEGYVNVYYAFDSSKPLAYSASAADYVANFLKKNPGVSVEIKGYADEL---GSEDYNIQ 377 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMNSANRRIDILVE 339 LS RA + Y +L+ +G+ R+ G+ +S RR+ V+ Sbjct: 378 LSEKRAKAVYDLLIATGIDASRL-SFKGYGEDTSVDKSSADARQMARRVSFEVK 430 >gi|221134181|ref|ZP_03560486.1| hypothetical protein GHTCC_04568 [Glaciecola sp. HTCC2999] Length = 303 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 57/183 (31%), Gaps = 21/183 (11%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 ++ L K + ++E+ + + + IS D +L Sbjct: 126 ETCQLPKLAQHNVEIEIDTTAQEESAQEEVVETIIKEETVISEPARNQEDDFAQILLLLN 185 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277 F +SS + + L + +++ + + + G TD Sbjct: 186 ADNQ--------------FATNSSEVNLKYVARLAQAVQIIQYYPQLQFHVVGSTDEL-- 229 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 +N L RA + L G+S DRI + D + NRR++ Sbjct: 230 -GNTENNMALGQARADGVARYLEAFGISMDRI-SVMTNGEANPLFPGDAPHIRLTNRRVN 287 Query: 336 ILV 338 I + Sbjct: 288 ITL 290 >gi|313191694|emb|CBW30515.1| putative outer membrane protein A [Bordetella petrii] gi|313191698|emb|CBW30516.1| putative outer membrane protein A [Bordetella petrii] gi|313191702|emb|CBW30517.1| putative outer membrane protein A [Bordetella petrii] Length = 164 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 5/82 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L ++ + + I GHTD+ N +LS RA S Sbjct: 87 FFDFDKSTLKPEGRQLLDQVAQQASGIDLETIIAVGHTDSI---GTEAYNQKLSERRAAS 143 Query: 295 AYQVLMKSGVSEDRISKISGFA 316 L+ GV +RI G Sbjct: 144 VKSYLVSKGVDPNRIYT-EGKG 164 >gi|312116152|ref|YP_004013748.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] gi|311221281|gb|ADP72649.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 568 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 74/211 (35%), Gaps = 13/211 (6%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + +++ + + + + + + L+ + Sbjct: 364 PSYSVKEGVETQVSSHVTELPVVSRLLVLPEQRKVEELQGAVSAIMDKLAAIEARIEAGN 423 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE-T 248 L DL +++ L + + RN F + P+ Sbjct: 424 ASLADLKARVAEQGETLKTVSAQVFSPQQRFTEWAR------RNAIFFGDGTKFRNPDIA 477 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + ++ ++A+S + + G TD+ + N +L +RA + L+K GV+EDR Sbjct: 478 SRKIAELAAIVANSDIRLLVVGFTDSL---GQSERNQQLGQERAKAVVDELVKLGVAEDR 534 Query: 309 ISKISGFAHHRLKIASDPMN-SANRRIDILV 338 ++ +S I ++ S NRR++ + Sbjct: 535 LATVSRRTET--VITTETGATSNNRRVEFQL 563 >gi|146337406|ref|YP_001202454.1| hypothetical protein BRADO0242 [Bradyrhizobium sp. ORS278] gi|146190212|emb|CAL74204.1| hypothetical protein BRADO0242 [Bradyrhizobium sp. ORS278] Length = 337 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 50/127 (39%), Gaps = 10/127 (7%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRG 270 + + + NT FD S P+ + LQ I + L EV I G Sbjct: 190 EVRYSPSVRQLMPSIDLNTITFDTGSWEIAPDQVAKLQVIADGLNQAIQRNPREVYLIEG 249 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS 329 HTDA DN LS RA S +L + GV + ++ G+ LK + + Sbjct: 250 HTDAV---GNETDNLSLSDRRAESVATLLTQQFGVPAENLTS-QGYGEQYLKEQTQGPSR 305 Query: 330 ANRRIDI 336 NRR+ + Sbjct: 306 INRRVTV 312 >gi|148259380|ref|YP_001233507.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5] gi|326402601|ref|YP_004282682.1| outer membrane lipoprotein Omp16 [Acidiphilium multivorum AIU301] gi|146401061|gb|ABQ29588.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5] gi|325049462|dbj|BAJ79800.1| outer membrane lipoprotein Omp16 [Acidiphilium multivorum AIU301] Length = 167 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286 + D + F + S L + LA V I G+ D N Sbjct: 49 VADVGDRAFFGFNKSNLTGADKATLDRQASWLAKYPNVDVLIAGNADPR---GTEAYNLA 105 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQG 343 L RA++A L+ GV+ RI +S + L + + +R + + QG Sbjct: 106 LGARRAHAARDYLVAKGVAASRIQTVS-YGKSCLVSPGNTEQDYAQDR---VAITSVQG 160 >gi|118591825|ref|ZP_01549220.1| possible OmpA family member [Stappia aggregata IAM 12614] gi|118435468|gb|EAV42114.1| possible OmpA family member [Stappia aggregata IAM 12614] Length = 628 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-----SIRGHTDASPFRNIARDNW 285 +T FD S++ + L+ I E I GHTDA N Sbjct: 510 DLDTITFDTGSAVVRQSQVPQLEDIARASQAVIEQDPTTVLLIEGHTDAV---GSDVSNL 566 Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA + ++L GV+ + + + G+ LK+ + NRR+ I Sbjct: 567 ALSDRRAETVARILADVYGVAPENMV-VQGYGEDYLKVDTQGAEERNRRVTI 617 >gi|301156335|emb|CBW15806.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 285 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 16/116 (13%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD P V+ + L + + + + G+TD N LS R Sbjct: 148 GDFLFDFDKDTLTPRGKEVVDNVAAQLKETGAKEVKVAGYTDRL---GSDAYNLDLSQRR 204 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAH-HRLKIAS----DPMNSA-----NRRIDIL 337 A L++ GV+ + G+ ++K + NRR++I Sbjct: 205 ANRVKARLIEDGVTSE--ITAVGYGKVPQVKACNGYKHASKAEKDCLRPNRRVEIT 258 >gi|149915595|ref|ZP_01904121.1| OmpA family domain protein [Roseobacter sp. AzwK-3b] gi|149810487|gb|EDM70330.1| OmpA family domain protein [Roseobacter sp. AzwK-3b] Length = 340 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S L + L + GHTD+ N LS RA + Sbjct: 235 FETGRSALGQGPFASLAALAAFLTEDDGRRVALVGHTDSV---GALEPNIDLSRARATAV 291 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVEDRQ 342 L+ K GV +++ G + ++ D ANRR++ ++ + + Sbjct: 292 MTRLIDKYGVRPEQLEA-RGVGYLAPIASNRTDTGRDANRRVEAVLLNTE 340 >gi|330878862|gb|EGH13011.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 320 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 68/212 (32%), Gaps = 11/212 (5%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 ++ S + K K + + + + + K+ Sbjct: 19 PWYWPFGSNDNAQAKPDAVASKSADKPAAPAMVAKSETDTKWWWPFGAEGKKDEPKALPM 78 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PET 248 + + L A E + I+ F+ L P T Sbjct: 79 PDPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNT 135 Query: 249 IVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + + ++ +V+ + I GH D N ++S +RA S + SG+ + Sbjct: 136 LGPITRLAKVVEGDQKTAVLILGHADT---SGPTEGNQKISQERAQSVAAIFRLSGLERN 192 Query: 308 RISKISGFAHHRLKIASDP--MNSANRRIDIL 337 R+S+ G + A+D + NRR++IL Sbjct: 193 RLSQ-RGMGAVMPRAANDSLEGRALNRRVEIL 223 >gi|317009738|gb|ADU80318.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori India7] Length = 179 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 67 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K A NRR+D+ + Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 177 >gi|207092711|ref|ZP_03240498.1| peptidoglycan associated lipoprotein precursor (omp18) [Helicobacter pylori HPKX_438_AG0C1] Length = 167 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 55 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 111 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K A NRR+D+ + Sbjct: 112 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 165 >gi|305667116|ref|YP_003863403.1| hypothetical protein FB2170_12741 [Maribacter sp. HTCC2170] gi|88708050|gb|EAR00288.1| hypothetical protein FB2170_12741 [Maribacter sp. HTCC2170] Length = 366 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 82/267 (30%), Gaps = 18/267 (6%) Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 I P + + + D G+ + + + + + Q Sbjct: 104 ISAASFRPSSETVEIKPAYAQWELGAPAPDCASGNPDDCRYWCYKGYPAEFTTLDTQVLG 163 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE--KILAMKRKKRLQDLAKKIS 200 S+ + K+ + + + +P E K + K +++ ++ Sbjct: 164 ADASVAKTPIGSKNASYTKRVLLEPTRVIEEVIPAQYDEITKTVLDKDAYTVEETVPAVT 223 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVL 259 T++ V + ++ N + S+ ++ VL Sbjct: 224 KTVTKEVLKEKGGLTTWNEVECSLVEYQALPINWNL---GSATLTSSAKNIIDTRLMPVL 280 Query: 260 AHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + V I HTD N LS RA + L+ GV+ + +G+ + Sbjct: 281 QQNPGVKLEIASHTDVRGNSG---SNQDLSERRAKAVADYLITKGVNSSLLVA-NGYGEN 336 Query: 319 RLKIA-------SDPMNSANRRIDILV 338 ++K ++ ++ NRR + + Sbjct: 337 KVKNRCKEGVSCTEREHAVNRRTEFRL 363 >gi|50235073|gb|AAT70739.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEAPGAFKGIFFNFNKASIRCESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + +V+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAQVIQSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|260769131|ref|ZP_05878064.1| outer membrane protein [Vibrio furnissii CIP 102972] gi|260614469|gb|EEX39655.1| outer membrane protein [Vibrio furnissii CIP 102972] Length = 208 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 7/116 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q+ +F +SS P + ++++ + L E I ++G+ A N LS Sbjct: 83 QKLHILFANNSSTIPPVFMNQIRQMADFLKLYPEASIELQGYASKV---GKADHNLALSK 139 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 R+ + L++ GV+ RI +I G+ L + + ++ NRR+ V +G Sbjct: 140 QRSEAVRLQLLRFGVTPKRI-RIVGYGDTVLAVNGEDQVSHAQNRRVTASVVGFKG 194 >gi|256785509|ref|ZP_05523940.1| secreted protein [Streptomyces lividans TK24] Length = 206 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 54/188 (28%), Gaps = 18/188 (9%) Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + E P K A + ++ D+ + ++ Sbjct: 27 ADDDPNDPPGTEPSASAPVEVDPNDPDLKLPDGATLAQAKVLDIKSVVEEQSGDERREDT 86 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRG 270 V + +F K SS E ++ I + + + + + G Sbjct: 87 NTSVTLAL------------QAEVLFGKDSSKLGAEAKSRIRGIADEIRAQNATRVRVFG 134 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 TD + LS RA + + VL +S ++ G+ + Sbjct: 135 FTDDL---GSSAHGDVLSKRRANAVHDVLSQSLNDAGITYEVRGYGEQYPIADNSTEAGR 191 Query: 331 --NRRIDI 336 NRR+++ Sbjct: 192 KKNRRVEV 199 >gi|171463096|ref|YP_001797209.1| peptidoglycan-associated lipoprotein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192634|gb|ACB43595.1| peptidoglycan-associated lipoprotein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 166 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + F + +L L + + I I+G+ D A N L Sbjct: 58 EKSVYFGFDEYTVQTKYQKMLSAHAGYLKANPKQKIIIQGNADER---GTAEYNLALGQR 114 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 R+ + + L GVS+D++ +S F + K ++ + NRR DI+ Sbjct: 115 RSDAVCKSLNLIGVSDDQMEAVS-FGKEKPKAEGDNEAAWAENRRADIV 162 >gi|296280731|gb|ADH04663.1| OmpA [Riemerella anatipestifer] Length = 387 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 70/268 (26%), Gaps = 24/268 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 111 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSEAPGLPEFQGCPDTDGDGVPDKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 171 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 214 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + ++ F+ + + E+ L Sbjct: 215 TDNDGVLDKDDKCPTVPGLPQYDGCPKPQSAFAAEATGALQGIFFNFNKASIRSESNTKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDI 336 G AS+ +R++ + Sbjct: 332 -KGVGSAEATVPASASNEERMKDRKVVV 358 >gi|115374815|ref|ZP_01462090.1| flagellar motor protein MotB [Stigmatella aurantiaca DW4/3-1] gi|115368211|gb|EAU67171.1| flagellar motor protein MotB [Stigmatella aurantiaca DW4/3-1] Length = 261 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 14/213 (6%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + +Q + + + + + + ++ LP ++ + R + Sbjct: 24 AQLEQEANESEARVAELQALRVSMERRLRVLEQQQQGATSLPGDLRKARELGTQMVRRET 83 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 +++ L + T + +F+ S P VL + Sbjct: 84 ARLNLTAKLKEELTRGDAWLDAIGTEALRLE-----LSERLLFEPGQSNLTPRGTEVLAR 138 Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIARD---NWRLSLDRAYSAYQVLMK--SGVSEDR 308 G VLA + HTD P A +W LS RA + + L + + ++++R Sbjct: 139 AGAVLAAVEGHTVEVAAHTDELPVPAEAETEGTSWELSTARAATVVRALHEGPARLAQER 198 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 +S +G A R + SD NRR+ +++ Sbjct: 199 LSA-TGHASFRPVVPSDSPVNRLRNRRVTLMLR 230 >gi|224371626|ref|YP_002605790.1| putative chemotaxis protein [Desulfobacterium autotrophicum HRM2] gi|223694343|gb|ACN17626.1| putative chemotaxis protein [Desulfobacterium autotrophicum HRM2] Length = 310 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 79/230 (34%), Gaps = 13/230 (5%) Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 L I + ++ + +E+ + + + SL + K ++ + ++ Sbjct: 84 LDIQAQDRPIPQELIESRNLMVEKQSSAIKERESLLEQIQAHTLTLKKLEIPMGQKRIQS 143 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 L +E + + + A I V +G+ + + + Sbjct: 144 KNLFETGEELPGNTDFVEDDLVSLDLEKELTTKINAMGIRDWVELANNNSGLRLEV---Q 200 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 +F S + L+KI ++ + + G TD ++ N L RA Sbjct: 201 LPILFAPGRSTIIGSYEGFLEKIATLVKPYEVFVHVNGVTD--GAKSKKISNIDLGARRA 258 Query: 293 YSAYQVLMKSGVSEDRISKISGFAH----HRLKIASDPMNSANRRIDILV 338 + L+K G+ I KI+ +K+ + P S NRR +I V Sbjct: 259 TAIVNRLVKYGLPPS-IFKITSRGEYSEGSHMKV-NSP--SLNRRAEITV 304 >gi|186472020|ref|YP_001859362.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815] gi|184194352|gb|ACC72316.1| OmpA/MotB domain protein [Burkholderia phymatum STM815] Length = 371 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 14/115 (12%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD S+ E + + L +V+++ G+TD N LS R Sbjct: 204 DALFDFDSAKLKAEGFEAVDVLASNLKRVKAIDVVTVIGYTDRF---GSVAHNRDLSRRR 260 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPM----NSANRRIDILV 338 A + L + GV + G + P + NRR++I V Sbjct: 261 AQAVADALKQRGVDPGHFD-VRGAGSTAPVVTCPGPKKPAVIECLAPNRRVEIRV 314 >gi|197337791|ref|YP_002158113.1| OmpA family protein [Vibrio fischeri MJ11] gi|197315043|gb|ACH64492.1| OmpA family protein [Vibrio fischeri MJ11] Length = 306 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 6/137 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEV 258 + +S D + V ++ Q F+ S + L + Sbjct: 22 DTYVSQENIDKYDERVQKFLIAECLVPQREIQIGVAEHFEFDKSEIMEGDFPSLNQFVRD 81 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I+I GHTD ++ + N +LSL RA S L+K +++ +I + Sbjct: 82 IEKLKGRIAIVGHTD---YQGSEKYNEQLSLRRADSIKTYLLKQLNADNYEWEIKYYGEK 138 Query: 319 RLKIASDP--MNSANRR 333 + I N+ANRR Sbjct: 139 KPLIEGRTLEANAANRR 155 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 54/152 (35%), Gaps = 10/152 (6%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIP 244 KK L + ++ + + V ET + + M FD S+ Sbjct: 137 EKKPLIEGRTLEANAANRRAYLVFEQTVEKETNPACLPPEPKRKVYVTMASHFDFDKSVL 196 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + + L K+ L T I I GHTD ++ N +L+ +R+ + + L V Sbjct: 197 KEKDKIELDKLALKLEGLTGRILIAGHTD---YQGSVSYNEKLAKERSIAVQEYLKTR-V 252 Query: 305 SEDRIS-KISGFAHHRLKIASDP--MNSANRR 333 + ++ F I N+ NRR Sbjct: 253 DPTQFVWEVKSFGESEPIIQEHTLKANAENRR 284 >gi|121582538|ref|YP_974070.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42] gi|120608596|gb|ABM44335.1| OmpA/MotB domain protein [Acidovorax sp. JS42] Length = 347 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 77/270 (28%), Gaps = 18/270 (6%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 L + +S ++ + + + ++ + Sbjct: 83 ALHPGTPFWPAPVTWALGASMLAAGVTGCAPMPPEQPRVLLMGAPVLTGLAQVRDPQTGT 142 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 C + G K+ + + L L + + Sbjct: 143 DYFVPCNPCAAPTPKTPMLGSTDAAPEATGKAAARPQPSVLVKLDAHTVATLAMPAEADA 202 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FDKSSSIPLPETIV 250 + + + + V + + + + +TP+ F + +I + Sbjct: 203 IPAGSAQLTDDV------QPVTVIASGPSVTTPVTETASTPLRSIPFPSAVAILNDDAKR 256 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L ++ LA E + IRG TD++ N L++ RA + GV ++ Sbjct: 257 GLSELLP-LAMKAERVFIRGRTDST---GTVAGNRALAIARAATVRAAFASGGVDPRKLK 312 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDILV 338 + ++D NRR+++ + Sbjct: 313 --VSYCVTCFVASNDTEAGRSANRRVEVEL 340 >gi|88858031|ref|ZP_01132673.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Pseudoalteromonas tunicata D2] gi|88819648|gb|EAR29461.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Pseudoalteromonas tunicata D2] Length = 299 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 F+ I + ++ + + + GHTD N LS Sbjct: 192 EFIVYFEFDKDHLTKTAIATINEVKQAVNEWKPKTVVLSGHTD---LAGQNIYNEGLSTR 248 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338 R + L+ +GV E++I IS + + NRR++I + Sbjct: 249 RVTNVLNGLILAGVPENKID-ISALGERHPAVRTPDGTKKAENRRVEIHL 297 >gi|167033774|ref|YP_001669005.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1] gi|166860262|gb|ABY98669.1| OmpA/MotB domain protein [Pseudomonas putida GB-1] Length = 831 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 79/265 (29%), Gaps = 35/265 (13%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 +N+ +L+ S + + L ++ S + + ++ S+ ++ L+ Sbjct: 569 QRNTRELQPVSGVDSVEAEALPHDNRAQSIADFGKATLDTYVMLSQAMREKADPAFLKAH 628 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL- 225 + + + +++ A S ++ V ++ Sbjct: 629 LPDYWYPAIARHTGKRMAAAGSDASGDQDYLYASRQITFYSDQIREPDVPRILDNAFLMS 688 Query: 226 ----------------ISIIDQRNTPMFDKSSSIP---LPETIVVLQKIGEVLAHSTEVI 266 I I + +F + E L I L ++ + Sbjct: 689 SSRNYIDSLRAQSLRSIETITLESDTLFAFGRADFQSLKNEGQNQLSAIASKLLNTPNIG 748 Query: 267 SI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + GH D ++ N ++S RA + L+ GV + + G + + Sbjct: 749 KVVISGHADQL---GDSQGNLQVSKQRAQTIRTYLVGKGVPAE-LVVAQGEGSRKPLVNC 804 Query: 325 DPMNSA---------NRRIDILVED 340 D NRR++I V Sbjct: 805 DMQQPRAQLIKCLEPNRRVEIEVRG 829 >gi|284048662|ref|YP_003399001.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731] gi|283952883|gb|ADB47686.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731] Length = 351 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 9/139 (6%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + +V + + V + FD P L V Sbjct: 215 KKAAPVVEEPVAPTVAEPAASAHVYNDYYLDSIH--FDSDVDTPKASEAAKLANFVAVAK 272 Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G+TD+ N LS R + + +GV+ R+ +++ + Sbjct: 273 AHPDSTFKLVGNTDSD---ASNAYNEDLSKRRVLNVARYANDNGVAASRM-QLNYKGENN 328 Query: 320 LKIASDPMNSA--NRRIDI 336 ++ NRR+DI Sbjct: 329 PVSSNATEAGKADNRRVDI 347 >gi|289769405|ref|ZP_06528783.1| secreted protein [Streptomyces lividans TK24] gi|289699604|gb|EFD67033.1| secreted protein [Streptomyces lividans TK24] Length = 210 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 54/188 (28%), Gaps = 18/188 (9%) Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 + E P K A + ++ D+ + ++ Sbjct: 31 ADDDPNDPPGTEPSASAPVEVDPNDPDLKLPDGATLAQAKVLDIKSVVEEQSGDERREDT 90 Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRG 270 V + +F K SS E ++ I + + + + + G Sbjct: 91 NTSVTLAL------------QAEVLFGKDSSKLGAEAKSRIRGIADEIRAQNATRVRVFG 138 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 TD + LS RA + + VL +S ++ G+ + Sbjct: 139 FTDDL---GSSAHGDVLSKRRANAVHDVLSQSLNDAGITYEVRGYGEQYPIADNSTEAGR 195 Query: 331 --NRRIDI 336 NRR+++ Sbjct: 196 KKNRRVEV 203 >gi|157087553|gb|ABV21642.1| outer membrane protein [Riemerella anatipestifer] Length = 387 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 74/264 (28%), Gaps = 24/264 (9%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + +R +D T +LK ++N Sbjct: 111 LANFWQASASLNFRFGNRDRDKDGVLDKDDACPDTPGLPELKGCPDTDGDGIADKDDNCP 170 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D + D + + P + + Sbjct: 171 EVAGPVENNGCPWPDT-DGDGVLDKDDACPEVAGPAENNGCPWPDTDNDGV--------- 220 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + ++ N F+ + + E+ L Sbjct: 221 ------LDKDDKCPTVPGLPQYNGCPKPQSEYAKDATGALNGIFFNFNKASIRTESNPKL 274 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 275 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVVALEARGVNPSQLKS 331 Query: 312 ISGFAH---HRLKIASDPMNSANR 332 G AS+ +R Sbjct: 332 -KGVGSAEATVPASASNEERMKDR 354 >gi|329935272|ref|ZP_08285238.1| hypothetical protein SGM_6755 [Streptomyces griseoaurantiacus M045] gi|329305095|gb|EGG48954.1| hypothetical protein SGM_6755 [Streptomyces griseoaurantiacus M045] Length = 218 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 58/194 (29%), Gaps = 19/194 (9%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + T G D + ++ P K A ++ D+ + Sbjct: 22 APTPALADGGDPSRPPGTVETSPPPTVDPNSPGLKLADGATLAAAKVLDIKSVVEDLGGE 81 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-E 264 ++ + V F + +F K S PE + I E + + Sbjct: 82 ERREDTNENVTFAL------------QAEVLFPKDSPKLNPEARSRIDAIAEEIKKQNAQ 129 Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 + + G TD LS RA + + L + D ++ G++ + Sbjct: 130 AVRVFGFTDNL---GSYAHGLVLSKRRAEAVHDELASR-LDGDVTFEVRGYSEDYPIADN 185 Query: 325 DPM--NSANRRIDI 336 NRR+++ Sbjct: 186 TSEQGRRKNRRVEV 199 >gi|310822107|ref|YP_003954465.1| peptidoglycan-associated lipoprotein (pal) family protein [Stigmatella aurantiaca DW4/3-1] gi|309395179|gb|ADO72638.1| Peptidoglycan-associated lipoprotein (Pal) family protein [Stigmatella aurantiaca DW4/3-1] Length = 177 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 7/107 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ S+ PE+ L+++ E L ++I GHT N L R Sbjct: 63 GPIYYELDSTTLRPESRETLERLAEALRRRPGARVTISGHTCEL---GTTEYNLALGQRR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 A A L+K GV + + + + + + + S NRR + Sbjct: 120 AAMAKDYLVKLGVGPGNV-AVVSYGEESPAVLGSGEEVWSRNRRSEF 165 >gi|163740457|ref|ZP_02147851.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10] gi|161386315|gb|EDQ10690.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10] Length = 326 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + + L + E L + + + GHTD N +S RA + Sbjct: 222 FETGAVTLGAKPYDSLAALAEFLIQNPDFDVLLVGHTDTV---GSLEQNIAISERRADAV 278 Query: 296 -YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 ++L S V R+ ++G + NRR+++++ R Sbjct: 279 RRRLLADSAVGGARV-AVAGAGFMAPLTTNLTPEGREANRRVEVVLIRR 326 >gi|46581507|ref|YP_012315.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris str. Hildenborough] gi|120601327|ref|YP_965727.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4] gi|46450929|gb|AAS97575.1| peptidoglycan-associated lipoprotein, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120561556|gb|ABM27300.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4] gi|311235156|gb|ADP88010.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris RCH1] Length = 167 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 F+ E+ VL++ EV+ + + GH D N L Sbjct: 60 DAKVYFEFDKFDLKAESKEVLKQKAEVMKKFPSIRVLVEGHCDER---GTQEYNLALGER 116 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 RA +AY+ L+ GV+ ++ IS + R + + NRR + V Sbjct: 117 RARAAYEYLVMLGVNAGQLEMIS-YGKERPAVEGHGEAAWSKNRRDEFKV 165 >gi|300722575|ref|YP_003711865.1| outer membrane protein 3a [Xenorhabdus nematophila ATCC 19061] gi|218157851|gb|ACK58677.1| OpnT [Xenorhabdus nematophila] gi|297629082|emb|CBJ89667.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus nematophila ATCC 19061] Length = 369 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 7/93 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLS 288 R+ +F+ + S PE L + LA + + G+TD N LS Sbjct: 239 RSDVLFNFNKSTLKPEGQQELDNLYNQLAKIDPTQGNVVVIGYTDRI---GSQNFNLPLS 295 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 RA S L+ G+ + I G Sbjct: 296 HKRAQSVVDYLVAKGIPANSIQA-EGRGKESPV 327 >gi|299138485|ref|ZP_07031664.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8] gi|298599731|gb|EFI55890.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8] Length = 256 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 7/116 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWR 286 +D S P+ + L + I G+ D A N Sbjct: 145 FHQNVQDLFYDYDSFDLRPDAQSSVMHAASYLNAHPAIKVLIGGYCDDR---GSAEYNIT 201 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 L +RA +A L+ +GVS +R+ ++ + + ++ NRR ++ Sbjct: 202 LGENRANAAKTALVSAGVSANRL-RVVSYGKEKQFCTEENESCWQQNRRAQFTLDK 256 >gi|296136329|ref|YP_003643571.1| OmpA/MotB domain protein [Thiomonas intermedia K12] gi|294340565|emb|CAZ88950.1| putative OmpA/MotB precursor [Thiomonas sp. 3As] gi|295796451|gb|ADG31241.1| OmpA/MotB domain protein [Thiomonas intermedia K12] Length = 230 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 17/117 (14%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 F + ++ LP L + + + I G+TD+ N +LS+ RA Sbjct: 111 DAFFQFNKAVLLPAGKEKLDDLAGKIKAINLEVVIATGYTDSF---GSVAYNQKLSVRRA 167 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP----------MNSANRR--IDIL 337 + L+ GV D+I + G ++ + NRR ++++ Sbjct: 168 EAVKAYLVSQGVPADKIY-VEGKGKTDFRVDPKSCKGSFKSQVECQAPNRRTVVEVV 223 >gi|221638345|ref|YP_002524607.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131] gi|221159126|gb|ACM00106.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131] Length = 696 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 73/234 (31%), Gaps = 13/234 (5%) Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + GS + + + + + I+ E+Y Sbjct: 457 RPGSEVVTQSFDDGSTRSVVTRADGTQIVTIRDASGRVLRRTAVDGQGREVMLIDDLESY 516 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID--- 230 +S+ A + + L ++ + R + + Sbjct: 517 QAVDVSRLPEPAPVYSFVQTRDERDLRQALEQTRTRDLDRTYSLRQIREYREVRALAPAI 576 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285 + FD S+ P+ L +G+ +A EV I GHTDA A N Sbjct: 577 DVDQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAV---GDAASNL 633 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 LS RA S L + V + + + G+ L++ SD NRR+ + + Sbjct: 634 ALSDRRAESVALALTEYFDVPPENMV-VQGYGEEDLRVDSDGPEQRNRRVAVRL 686 >gi|319641785|ref|ZP_07996465.1| hypothetical protein HMPREF9011_02063 [Bacteroides sp. 3_1_40A] gi|317386574|gb|EFV67473.1| hypothetical protein HMPREF9011_02063 [Bacteroides sp. 3_1_40A] Length = 396 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 11/134 (8%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 ++K K +Q + K I + + + + V + + D N F+ + Sbjct: 237 KSLKVKPEIQYVEKIIEKVIEKPII--MKQIVETPSQPNVL----CDLFNNIYFEFDKTE 290 Query: 244 PLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ ++ +I + +L +++ I G TDA + ++ N LS RA + L+K Sbjct: 291 ITPKAATIIDEIAQIMLTDTSKKYLITGCTDA---KGSSQYNMDLSQKRADAVVNALIKK 347 Query: 303 GVSEDRISKISGFA 316 GV +++ K G Sbjct: 348 GV-PNKMLKAKGVG 360 >gi|294775157|ref|ZP_06740683.1| OmpA family protein [Bacteroides vulgatus PC510] gi|294450969|gb|EFG19443.1| OmpA family protein [Bacteroides vulgatus PC510] Length = 396 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 11/134 (8%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 ++K K +Q + K I + + + + V + + D N F+ + Sbjct: 237 KSLKVKPEIQYVEKIIEKVIEKPII--MKQIVETPSQPNVL----CDLFNNIYFEFDKTE 290 Query: 244 PLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ ++ +I + +L +++ I G TDA + ++ N LS RA + L+K Sbjct: 291 ITPKAATIIDEIAQIMLTDTSKKYLITGCTDA---KGSSQYNMDLSQKRADAVVNALIKK 347 Query: 303 GVSEDRISKISGFA 316 GV +++ K G Sbjct: 348 GV-PNKMLKAKGVG 360 >gi|254883115|ref|ZP_05255825.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|254835908|gb|EET16217.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 410 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 11/134 (8%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 ++K K +Q + K I + + + + V + + D N F+ + Sbjct: 251 KSLKVKPEIQYVEKIIEKVIEKPII--MKQIVETPSQPNVL----CDLFNNIYFEFDKTE 304 Query: 244 PLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ ++ +I + +L +++ I G TDA + ++ N LS RA + L+K Sbjct: 305 ITPKAATIIDEIAQIMLTDTSKKYLITGCTDA---KGSSQYNMDLSQKRADAVVNALIKK 361 Query: 303 GVSEDRISKISGFA 316 GV +++ K G Sbjct: 362 GV-PNKMLKAKGVG 374 >gi|150004726|ref|YP_001299470.1| hypothetical protein BVU_2187 [Bacteroides vulgatus ATCC 8482] gi|149933150|gb|ABR39848.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 423 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 11/134 (8%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 ++K K +Q + K I + + + + V + + D N F+ + Sbjct: 264 KSLKVKPEIQYVEKIIEKVIEKPII--MKQIVETPSQPNVL----CDLFNNIYFEFDKTE 317 Query: 244 PLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ ++ +I + +L +++ I G TDA + ++ N LS RA + L+K Sbjct: 318 ITPKAATIIDEIAQIMLTDTSKKYLITGCTDA---KGSSQYNMDLSQKRADAVVNALIKK 374 Query: 303 GVSEDRISKISGFA 316 GV +++ K G Sbjct: 375 GV-PNKMLKAKGVG 387 >gi|281192981|gb|ADA57643.1| outer membrane protein A precursor [Aeromonas hydrophila] Length = 343 Score = 70.0 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 18/125 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 + + PE + L + + + + G+T+ N +LS Sbjct: 219 NSDVLLAFGKDSLKPEGVAALNALYQQIVEFQPKDGNAVVVGYTNRI---GSDAYNQKLS 275 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-----------DPMNSANRRIDIL 337 RA + L+ G++ ++ I G + + +RR+++ Sbjct: 276 EARARTVANFLVSKGMAASKV-AIEGRGEANPVTGTKCNGVKAKAQLTSCLAPDRRVEVR 334 Query: 338 VEDRQ 342 V Q Sbjct: 335 VSGVQ 339 >gi|311696332|gb|ADP99205.1| OmpA/MotB domain protein [marine bacterium HP15] Length = 146 Score = 70.0 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 6/101 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + + + I LQ+ L V I GH+D N LS RA + Sbjct: 40 YGFNKHSLDKDDIAFLQQHAAYLKEHPSVSVRIHGHSDNF---GSEDYNQFLSRLRANAV 96 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + L++ GV E RI + + R + +ANRR+++ Sbjct: 97 ARSLIQEGVEESRIL-MRHWGSARPLATPE-DRAANRRVEL 135 >gi|160889745|ref|ZP_02070748.1| hypothetical protein BACUNI_02175 [Bacteroides uniformis ATCC 8492] gi|270294032|ref|ZP_06200234.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317478785|ref|ZP_07937937.1| OmpA family protein [Bacteroides sp. 4_1_36] gi|156860737|gb|EDO54168.1| hypothetical protein BACUNI_02175 [Bacteroides uniformis ATCC 8492] gi|270275499|gb|EFA21359.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316905045|gb|EFV26847.1| OmpA family protein [Bacteroides sp. 4_1_36] Length = 224 Score = 70.0 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 54/148 (36%), Gaps = 9/148 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + + + V+ V + +S +F +S+ E L+++ Sbjct: 75 KMDKKAAEAAKIEGAQVEQVTDANGLPAVKVSF---AAGILFGFNSAALSNEAKASLREL 131 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++L I GHTD N ++S +RAY+ L GVS + K+ G Sbjct: 132 AQILKEDPTTDIAIIGHTDKV---GTYEANMKVSKNRAYAVENYLQDCGVSPAQFKKVEG 188 Query: 315 FAHHRLKIASDPMNSANRRIDILVEDRQ 342 ++ NRR+++ + + Sbjct: 189 VGYNE--YDESLSADQNRRVEVYMYASE 214 >gi|26990523|ref|NP_745948.1| OmpA/MotB domain protein [Pseudomonas putida KT2440] gi|24985500|gb|AAN69412.1|AE016577_7 periplamic phosphate-binding protein [Pseudomonas putida KT2440] Length = 435 Score = 70.0 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 32/262 (12%), Positives = 75/262 (28%), Gaps = 14/262 (5%) Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 D E ++ E K + R L+ ++ Sbjct: 179 DRSGTFETFKALVLEPQQGELSAKARRFESSDELAARVGTDRQAIGFSSLAAVHGAKVLA 238 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST-- 202 + + + + +++ ++LP K + A+ + I+ Sbjct: 239 VAEGDAPAMLPERARVASEDYPLSRRLYFYLPANPKPQAKALVDFAQSPAGQAIIAQQGF 298 Query: 203 -LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + A ++ + F + S+ + + +Q++ E L Sbjct: 299 VSQQIKALSVAPQSDMPPPYRTLARQAQRLSVNFRFQEGSASLDNKALRDVQRVTEYLRQ 358 Query: 262 ---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + G D A LS RA + + L + GV + +++G Sbjct: 359 AGKLQGKAVLVGFGDPKETPGRAAL---LSRLRAQAVRRELARGGVE---VLQVTGMGDE 412 Query: 319 RLKIASDPMNS--ANRRIDILV 338 ++ NRR+++ V Sbjct: 413 LPVAGNELEQGRLRNRRVEVWV 434 >gi|332560366|ref|ZP_08414688.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N] gi|332278078|gb|EGJ23393.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N] Length = 701 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 56/152 (36%), Gaps = 13/152 (8%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIID---QRNTPMFDKSSSIPLPETIVVL 252 + + L ++ + R + + + FD S+ P+ L Sbjct: 544 ERDLRQALEQTRTRDLDRTYSLRQIREYREVRALAPAIDVDQITFDTGSAAIDPDEAEKL 603 Query: 253 QKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSE 306 +G+ +A EV I GHTDA A N LS RA S L + V Sbjct: 604 ASLGQTIADMIAERPEEVFLIEGHTDAV---GDAASNLALSDRRAESVALALTEYFDVPP 660 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + + + G+ L++ SD NRR+ + + Sbjct: 661 ENMV-VQGYGEEDLRVDSDGPEQRNRRVAVRL 691 >gi|332186615|ref|ZP_08388358.1| ompA family protein [Sphingomonas sp. S17] gi|332013267|gb|EGI55329.1| ompA family protein [Sphingomonas sp. S17] Length = 220 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 52/196 (26%), Gaps = 12/196 (6%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 C + D +G + D ++ + A + + + Sbjct: 29 CAFAGKCDGVQGAQPVVTRDAPETKGFRLAKPSASGEASGVAA-----TVTSQPRSVDRA 83 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL--- 259 + F+ +S+ E Q L Sbjct: 84 TRRSSLRRAHYTAPSAPAVNYGAVQRPRADLMIGFELNSARLSAEGTRAAQVFARSLLMP 143 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + I GHTD R AR N LS RA + L+ GV R+ GF Sbjct: 144 ELKDKRFLIEGHTD---LRGGARINGPLSTARAKAVADYLVTLGVDRSRLET-RGFGSAM 199 Query: 320 LKIASDPMNSANRRID 335 + NRR++ Sbjct: 200 PLPGHSKADPVNRRVE 215 >gi|78484705|ref|YP_390630.1| OmpA/MotB [Thiomicrospira crunogena XCL-2] gi|78362991|gb|ABB40956.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2] Length = 230 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 261 HSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 +S+ G+TD ++ R+NW LS RA + + L +S + ++G+ + Sbjct: 134 SWRSEVSVAGYTDDDQIDPQSPLRNNWFLSTMRAQNVMKSLYQSSELKQSQFGVTGYGKY 193 Query: 319 RLKIASDPMN--SANRRIDILV 338 R +++ + NRR+ +++ Sbjct: 194 RPVASNETREGKAKNRRVQVMI 215 Score = 45.3 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 51/145 (35%) Query: 32 SWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPE 91 SW + D +T+L+ FF++M ++N + + + +T + + Sbjct: 11 SWLFSFGDLVTLLITFFIMMIVLNKGEISQVQKWAESQLDTAYAQLTTQMADAEYVSLSR 70 Query: 92 RSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDS 151 ++ +++S E K +L ++ Q + ++ + D+ Sbjct: 71 TANGISVNISHPEAFVKGGYNLSSALESELTQLGKALQSLKIFHLERSDVPIHILRIADA 130 Query: 152 EKGKDLCKSTDLEKSINKEENYFLP 176 + + + + + + + P Sbjct: 131 DSLSWRSEVSVAGYTDDDQIDPQSP 155 >gi|90414986|ref|ZP_01222948.1| hypothetical protein P3TCK_23895 [Photobacterium profundum 3TCK] gi|90323925|gb|EAS40525.1| hypothetical protein P3TCK_23895 [Photobacterium profundum 3TCK] Length = 260 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 13/167 (7%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 E + + L + + D + + + ++ M Sbjct: 71 KARDEAKAGFDKDAEITLLQYQTQQAIIQTQMDWLEYHTTCFDHSYS-EVELKEKLLVFM 129 Query: 237 -----FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290 F + + LP+ L+ +L S + + GHTD+ + N +L + Sbjct: 130 ALDNQFALNRAELLPDYQQALRYAATILKRQSHWHLQLTGHTDSL---GTSDSNIQLGMK 186 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRID 335 RA + + L++ GV ++I + + ANR+++ Sbjct: 187 RASAVKRFLIEQGVKSNQI-AVFSAGESMAMDDTHSRTQRLANRKVE 232 >gi|144898281|emb|CAM75145.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Magnetospirillum gryphiswaldense MSR-1] Length = 300 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 55/163 (33%), Gaps = 9/163 (5%) Query: 184 LAMKRKKRLQDLAKKISSTL--SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 ++ ++A + + ++ V+ G + FD Sbjct: 142 QEQNEGWQMDEIAACRGAFMTHMQQISAGPKMSVVQPAPAKGTVAGTKPTNYLVFFDFDK 201 Query: 242 SIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + LPE ++ + + A +I + G+TD N +LS R + Q L+ Sbjct: 202 ADLLPEARGIIASALKAITAEPQGMIKVTGYTDT---SGTPSYNDKLSARRGNAVEQALL 258 Query: 301 KSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341 G++ DRI + L + NRR I + + Sbjct: 259 HGGIAADRI-SVDSRGESDLFVQTPDGVREPQNRRATIELMGK 300 >gi|114047773|ref|YP_738323.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7] gi|113889215|gb|ABI43266.1| OmpA/MotB domain protein [Shewanella sp. MR-7] Length = 264 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 74/259 (28%), Gaps = 26/259 (10%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 + R S + + D G L + +L Sbjct: 21 SVSARVSLQNQPVLSEPQTEMLEQDEDDGEALIGLGGGALLGALVGGPVGAIIGGFTGTL 80 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 S D K+ ++ +++ L + Q ++ + L+ Sbjct: 81 IGQSVSDTDTVKTQQQHIALQRQQLASLSSKQQASEQRAAEYASTQKQLDELLAEQQQLL 140 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266 ++ + F SS + L + +V+ S+E + Sbjct: 141 SELALGM-------------------NVQFRTGSSELESHFLPQLDNVVKVMKRSSESNL 181 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 ++G+ D N LS R L+K GV+ +RI+ F Sbjct: 182 ELKGYADRR---GDLAYNQALSEQRLLEVRGYLIKQGVAPERITT-QAFGARMPLNDQQD 237 Query: 327 MNSA--NRRIDILVEDRQG 343 S +RR+ + ++ QG Sbjct: 238 SESDVFDRRVTLTMQPNQG 256 >gi|325109023|ref|YP_004270091.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305] gi|324969291|gb|ADY60069.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305] Length = 242 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 58/198 (29%), Gaps = 10/198 (5%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + +D E L + S + +E + + + Sbjct: 43 EMKQDGEMRAMLDALEERFGSSADMVSGVPGKSLQENSFYSTMQSSGRRSEDGLKKRSKD 102 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 ++ +FD S+ L + VL + + Sbjct: 103 SQGTVGKNETAERVNHGNVVTM----GGPALFDPFSATLNESIRENLDILAGVLKTRSNL 158 Query: 266 ISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRL-- 320 I +RGH P + D + LS RA + L++ + ++RI +S Sbjct: 159 ICVRGHASPEPLPFDSPFADQFALSFARAEAVANYLIEDQKIPQERII-VSAAGDTEPRM 217 Query: 321 KIASDPMNSANRRIDILV 338 +NRR+D+ + Sbjct: 218 LSRDAEQMGSNRRVDVFL 235 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 1/132 (0%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDD-DTKKAIEQYFNPFGKNL 76 KK+V D+ P + W + Y D M++L+ FF+++ ++ +A+ + Sbjct: 5 KKQVVQDEPPPGVPEWVVTYGDMMSLLLTFFIMLVSLSEMKQDGEMRAMLDALEERFGSS 64 Query: 77 MTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSN 136 G+ + T K + N+ ++ Sbjct: 65 ADMVSGVPGKSLQENSFYSTMQSSGRRSEDGLKKRSKDSQGTVGKNETAERVNHGNVVTM 124 Query: 137 SQQSEHCKNSLT 148 + S T Sbjct: 125 GGPALFDPFSAT 136 >gi|188533999|ref|YP_001907796.1| OmpA family protein [Erwinia tasmaniensis Et1/99] gi|188029041|emb|CAO96909.1| OmpA family protein [Erwinia tasmaniensis Et1/99] Length = 407 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 62/181 (34%), Gaps = 15/181 (8%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 E + + LP L + A + L DL +++S + + Sbjct: 223 RSAEPLLQQIWQTPLPQLPGGQRTAAP--QDLFDLRQRLSDLIGS-------HRLDVTDG 273 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDAS-PFRN 279 G I + +F + PE ++ ++ + + I +TD P + Sbjct: 274 DYGNKIILPAD---SLFTYQGAALTPEGRALVARVASAMESRKGTLLIGVYTDNRLPHSS 330 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 + S +A + ++++ + G R ++ ++ + NRR++I Sbjct: 331 PFTSTYAYSAAQAEAISNMMVQLIAHPCITVRAEGRGDSRGRVPNNSAENRARNRRVEIT 390 Query: 338 V 338 + Sbjct: 391 L 391 >gi|260575173|ref|ZP_05843173.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] gi|259022433|gb|EEW25729.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] Length = 438 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 97/286 (33%), Gaps = 15/286 (5%) Query: 57 TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHIT---KNSVDL 113 TD + + G L K + + + + + + + T + + Sbjct: 143 TDLEKFGLVVVGALVVGAILKNGDKVVSNTGDRVVVERDDGRYVVLKDDDTLLRRPGATV 202 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + + + +E + + + + + + + D + + + + Sbjct: 203 RTENFDDGSSRTTIERDDGSRIVTIRDASGRVLRRSRIDADGRVLRLIDDMEPVERIDVA 262 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 LP +++ + + A ++S L ++ + + +I + Sbjct: 263 TLPQRDPARLVISTQDENAALRAALLASESDDLGRRFSLRQIREIREVRALAPTI--DVD 320 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNWRLS 288 FD S+ L ++G ++A+ +E+ + GHTDA N LS Sbjct: 321 NITFDTGSAAIKATEAAKLARLGRLVANLIAANPSEMFLVEGHTDAV---GSGSSNLALS 377 Query: 289 LDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333 RA S L + GV + + + G+ L+I + ANRR Sbjct: 378 DRRAESLALALTEYYGVPPENLV-VQGYGETELRIDTLANEPANRR 422 >gi|83312507|ref|YP_422771.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Magnetospirillum magneticum AMB-1] gi|82947348|dbj|BAE52212.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Magnetospirillum magneticum AMB-1] Length = 278 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 9/109 (8%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD + S E L+++ I + GHTD N +LS RA Sbjct: 176 VYFDFNKSTLTKEAQKTLKEVATAAGQIKPASIYVAGHTDTVGKSG---YNDKLSNARAA 232 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340 + + L K+G+ F +L + + + + NRR++I E Sbjct: 233 AVSKQLAKAGIKS---IDAKSFGFTKLAVPTKANTKEAKNRRVEIYFEK 278 >gi|114767081|ref|ZP_01445964.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601] gi|114540734|gb|EAU43800.1| OmpA domain protein [Roseovarius sp. HTCC2601] Length = 310 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ + + L I LA + + + GHTDA+ N +S RA +A Sbjct: 206 FESGSASLGDDAVASLDAIAAYLAETPDRRVLFVGHTDAT---GSLEANIAVSRARADAA 262 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 + GV+ ++ G + ++ NRR++ ++ + Sbjct: 263 MDYVRGKGVAAAQLGS-EGAGYLAPVASNLTEVGREENRRVEAILLPTE 310 >gi|308050648|ref|YP_003914214.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] gi|307632838|gb|ADN77140.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] Length = 166 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 9/106 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD S+ PE L + + GH D+ N L RA + Sbjct: 57 FDTDSARLRPEHHDQLAVFVGD--GVAGRVRVVGHADSR---GSLAHNQDLGGRRALAVS 111 Query: 297 QVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + L + GV +I + + NRR+++ +E Sbjct: 112 KALSERYGVDASQIQR-QSLGETLPWRDNLTETGQTLNRRVELWIE 156 >gi|146281853|ref|YP_001172006.1| chemotaxis protein MotB-related protein [Pseudomonas stutzeri A1501] gi|145570058|gb|ABP79164.1| chemotaxis protein MotB-related protein [Pseudomonas stutzeri A1501] Length = 254 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 72/191 (37%), Gaps = 26/191 (13%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 L + ++ + + L+ + + L V +G+ E + ++SI + Sbjct: 48 QKLEERQVQFEQEIEELKKAEQVRRTILDEAVEALRRRGIKVEVSENHTVLSIPNDLLG- 106 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST---------EVISIRGHTDASPFRN-IARDNW 285 FD + +IG+V+ + I I GHTD P + + NW Sbjct: 107 -FDTGAYEIHSAYQARALEIGKVINEVISRDDRVEFLDTIFIEGHTDNRPLPGFMGKGNW 165 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISK-----------ISGFAHHRLKIASD-PMNS--AN 331 LS RA S +Q + E+++S+ +SG+ R +A N Sbjct: 166 GLSTFRAISLWQFWGDALAREEQLSRLNNKDGKPLFSVSGYGETRPAVADQVTEEDFKRN 225 Query: 332 RRIDILVEDRQ 342 RRIDI R+ Sbjct: 226 RRIDIRFTIRR 236 >gi|49187403|ref|YP_030655.1| chemotaxis protein motB, N-terminus [Bacillus anthracis str. Sterne] gi|227817293|ref|YP_002817302.1| chemotaxis protein MotB [Bacillus anthracis str. CDC 684] gi|254686999|ref|ZP_05150857.1| flagellar motor protein MotB [Bacillus anthracis str. CNEVA-9066] gi|254724562|ref|ZP_05186345.1| flagellar motor protein MotB [Bacillus anthracis str. A1055] gi|254736615|ref|ZP_05194321.1| flagellar motor protein MotB [Bacillus anthracis str. Western North America USA6153] gi|254741653|ref|ZP_05199340.1| flagellar motor protein MotB [Bacillus anthracis str. Kruger B] gi|254754749|ref|ZP_05206784.1| flagellar motor protein MotB [Bacillus anthracis str. Vollum] gi|254757581|ref|ZP_05209608.1| flagellar motor protein MotB [Bacillus anthracis str. Australia 94] gi|49181330|gb|AAT56706.1| chemotaxis protein motB, N-terminus [Bacillus anthracis str. Sterne] gi|227002719|gb|ACP12462.1| chemotaxis protein MotB [Bacillus anthracis str. CDC 684] Length = 109 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 25 DTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIF 84 + +W I Y+D +T+L A F+V++ +++ D K + F T +K Sbjct: 14 HEEHIDETWLIPYSDMLTLLFALFIVLFAMSSIDAAKFKQMAVAFR-SELAGGTGNKEFL 72 Query: 85 DEQNPPERSSQNKIDLSIDE 104 +Q P + + L ++ Sbjct: 73 SDQKPNDEKELSASSLETEQ 92 >gi|54307571|ref|YP_128591.1| hypothetical protein PBPRA0350 [Photobacterium profundum SS9] gi|46911994|emb|CAG18789.1| hypothetical protein PBPRA0350 [Photobacterium profundum SS9] Length = 253 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 13/167 (7%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 E + + L + + D + + + ++ M Sbjct: 64 KARDEAKAGFDKDAEITLLQYQTQQAVIQTQMDWLEYHTTCFDHSYS-EVELKEKLLVFM 122 Query: 237 -----FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290 F + + LP+ L+ +L S + + GHTD+ + +N +L + Sbjct: 123 ALDNQFALNRAELLPDYQQALRYAATILKRQSHWHLQLTGHTDSL---GTSDNNIQLGMK 179 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRID 335 RA + + L++ GV ++I I + ANR+++ Sbjct: 180 RASAVKRFLIEQGVKSNQI-AIFSAGESMSMDDTHSRTQRLANRKVE 225 >gi|313498243|gb|ADR59609.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1] Length = 435 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 28/230 (12%), Positives = 70/230 (30%), Gaps = 14/230 (6%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 + R L+ + ++ + + + + +++ ++LP Sbjct: 211 ELAARVGTDRQAIGFSSLATAHGAKVLAVAEGDAPAMLPERARVASEDYPLSRRLYFYLP 270 Query: 177 PLSKEKILAMKRKKRLQDLAKKISST---LSGLVADNIVKGVLFETTRTGILISIIDQRN 233 K + A+ + I+ + A ++ + Sbjct: 271 ANPKPQAKALVDFAQSPAGQAIIAQQGFVSQQIKALSVAPQGDMPPPYRTLARQAQRLSV 330 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLD 290 F + S+ + + +Q++ E L + G D A LS Sbjct: 331 NFRFQEGSASLDNKALRDVQRVTEYLRQAGKLQGKAVLVGFGDPKETPGRAAL---LSRL 387 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 RA + + L + GV + +++G ++ NRR+++ V Sbjct: 388 RAQAVRRELARGGVE---VLQVTGMGDELPVAGNELEQGRLRNRRVEVWV 434 >gi|297380304|gb|ADI35191.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori v225d] Length = 183 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 48/162 (29%), Gaps = 6/162 (3%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 KE + K +Q + K + + FD Sbjct: 24 DKETVAGDVSAKTVQSAPVSTETVQEKQEPKEEPKQEPAPVVEEKPAVESGTIIASIYFD 83 Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 L +I + + + + G+TD + N L + R S Sbjct: 84 FDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVKNA 140 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L+ GV +D I IS F + K NRR+D+ + Sbjct: 141 LIIKGVEKDMIKTIS-FGETKPKCTQKTRECYRENRRVDVKL 181 >gi|254361857|ref|ZP_04977991.1| lipoprotein PlpD [Mannheimia haemolytica PHL213] gi|3283200|gb|AAC32565.1| lipoprotein Plp4 [Mannheimia haemolytica] gi|153093396|gb|EDN74387.1| lipoprotein PlpD [Mannheimia haemolytica PHL213] Length = 284 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 14/113 (12%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + + V+ + + L S + + + G+TD A N LS R Sbjct: 143 GDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRL---GSAAYNLDLSQRR 199 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA------NRRIDI 336 + + L++ GV+ +I + G+ + + NRR++I Sbjct: 200 SNTVKARLVQQGVTA-QIEAV-GYGKANQVKACDGETGQALKDCLRPNRRVEI 250 >gi|258592566|emb|CBE68875.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 184 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 6/119 (5%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + S + + V E G+++ D +F S+ + +L K+ Sbjct: 69 VQQLSSHVEEEIKTGSVEIERNDKGLILRFRDT---VLFGLGSATLSDDAKKILDKVARP 125 Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGF 315 L + I + GHTD P R+ NW LS+ RA + + L++ R+ G Sbjct: 126 LFNMPYAIEVEGHTDLLPIRSSNFPSNWELSVTRATAVIRHLVEVHRFPPARL-AARGM 183 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 1/90 (1%) Query: 36 VYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN-PFGKNLMTASKGIFDEQNPPERSS 94 YAD +T+L+AFF+V++ + D + FG L Sbjct: 2 TYADMITLLLAFFIVLYASSRVDGRKYSDLVSSIRMAFGVPLPPRPIVQAGNGGETLLPF 61 Query: 95 QNKIDLSIDEHITKNSVDLKIGSTNQKKQY 124 + + L + + + ++K GS ++ Sbjct: 62 PDVVGLLVQQLSSHVEEEIKTGSVEIERND 91 >gi|89076293|ref|ZP_01162634.1| hypothetical protein SKA34_22947 [Photobacterium sp. SKA34] gi|89047997|gb|EAR53586.1| hypothetical protein SKA34_22947 [Photobacterium sp. SKA34] Length = 261 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 70/208 (33%), Gaps = 7/208 (3%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + +Q E + L + +G C + N L+ A Sbjct: 31 PPPKQAQLRQLELHQFELQLLAIRGAKHCLPGQYIRLQNLYLQARKEALNGFDHDAEMTL 90 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + Q I + L + + + + + F + + LP+ Sbjct: 91 LKYQTQNAVIQQQMDWLEYHTLCLQPNYSEVELKERFLLYMEVDNQ-FALNKTTLLPKYQ 149 Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L+ E+L S + + G+TD+ + N+ L L+RA + L+++GV ++ Sbjct: 150 ESLRYAAEILKRQSHWHLQLTGYTDSQ---GHIQGNYMLGLERANAVKDFLIENGVDTNQ 206 Query: 309 ISKISGFAHHRLKIASDPMNSANRR-ID 335 I + ++ + N R ++ Sbjct: 207 I-SVFSVGENQAVADNTLTKQLNNRKVE 233 >gi|23012822|ref|ZP_00052818.1| COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Magnetospirillum magnetotacticum MS-1] Length = 278 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 74/230 (32%), Gaps = 15/230 (6%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 K +Y+ + IF + + + ++ ++ +L + + YF Sbjct: 57 QEAKVEYEWDDAAIFARKGLRAATGESVAPAEVTDWEVPAARTAELTAARARLVGYFGNG 116 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID----QRN 233 + A + + + D + G + L + + + Sbjct: 117 ARERVPAAAAKAQVMFDC--WVEEEHEGDANSDCRAAFLKIEPELQVKAAAPAPKIVKTF 174 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S E L+++ I + GHTD N +LS RA Sbjct: 175 IVYFDFNKSTLTKEAQKTLKEVVASAGQIKPSSIYVAGHTDTVGKAG---YNDKLSKARA 231 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340 + + L K GV F +L + + + + NRR++I E Sbjct: 232 AAVEKQLAKLGVKS---IDAKAFGFAKLAVPTKANTKEAKNRRVEIYFEK 278 >gi|321472579|gb|EFX83548.1| hypothetical protein DAPPUDRAFT_239461 [Daphnia pulex] Length = 193 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + + PE+ VL+K L E + G+ D R N +L Sbjct: 78 EDRVFYGFDRYDLAPESRAVLEKQAAWLLKYPEREAEVAGYCD---VRGTVEYNDKLGQR 134 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANR 332 RA +A L GV R+S IS + + + NR Sbjct: 135 RADAARDYLTSLGVHAGRLSTIS-YGKRITLVPGHTEEIYAQNR 177 >gi|190574772|ref|YP_001972617.1| putative OmpA family protein [Stenotrophomonas maltophilia K279a] gi|190012694|emb|CAQ46322.1| putative OmpA family protein [Stenotrophomonas maltophilia K279a] Length = 300 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 14/113 (12%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDR 291 +F S++ E +Q I + + I + G+TD A N LS R Sbjct: 185 DALFGFDSAVLSAEGQQAVQGILAQVREAAQVQSIRVTGYTDRI---GSASYNQTLSQQR 241 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI 336 A + L++ GV IS G + + N NRR+ I Sbjct: 242 AEAVRSALVQGGVPAASISA-EGRGAAEPIVQCEQRNRRELIACLAPNRRVQI 293 >gi|226227699|ref|YP_002761805.1| putative outer membrane protein [Gemmatimonas aurantiaca T-27] gi|226090890|dbj|BAH39335.1| putative outer membrane protein [Gemmatimonas aurantiaca T-27] Length = 233 Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 10/113 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F + E L+K +V I++ G +D A N RLS +RA + Sbjct: 113 FGFDDAAVRQEDQAALEKFAQVAQSHYPGATITVEGFSD---PAGSAAYNLRLSRERADA 169 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIA----SDPMNSANRRIDILVEDRQG 343 L+ G+ + + G+ RL + NRR+ ++E G Sbjct: 170 VRDFLVTKGMDGAALRTV-GYGKARLVRPGAKGDESGAELNRRVTFVIESSGG 221 >gi|239817632|ref|YP_002946542.1| OmpA/MotB domain protein [Variovorax paradoxus S110] gi|239804209|gb|ACS21276.1| OmpA/MotB domain protein [Variovorax paradoxus S110] Length = 205 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 7/176 (3%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + + ++ + + K K Q + ++ + +V V + + Sbjct: 34 LPQADDKPSAVIVRAKDGEEVLSKPYQRATAAVGASGAPVVDQADPAKVQADHKILFDMR 93 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285 QR T F+ + P + V+ + + I + GHTD + N Sbjct: 94 PPAPQRYTVYFEVGGTTLTPASQQVMNEALMAAQSRSGSDIVVTGHTDT---KGALEQND 150 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 LS RA Q+ ++ RI + G L + + NRR+ I V Sbjct: 151 MLSQRRAQEVAQLFVERQFPAKRIEAV-GRGERELAVPTADEVDEPRNRRVTIEVR 205 >gi|146300540|ref|YP_001195131.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146154958|gb|ABQ05812.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 303 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 40/140 (28%), Gaps = 9/140 (6%) Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS--SSIPLPETIVVLQKIGEVLAHS 262 + + + I T F+ + S + + I + L + Sbjct: 168 EYKFETADTTSAVTDEWSALKDKINADPLTLHFNTNKSSFNLTNDEKQKVSDISKYLENV 227 Query: 263 TEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I GH+D N L+ RA L+K+G+ RI Sbjct: 228 KNASVLIVGHSDNV---GNRELNIVLAQKRADFTKNYLIKNGIEASRIET-ESKGPDEPA 283 Query: 322 IASDPMNSA--NRRIDILVE 339 + NRR I ++ Sbjct: 284 GDNTTAEGKASNRRTVITIK 303 >gi|327480088|gb|AEA83398.1| chemotaxis protein MotB-related protein [Pseudomonas stutzeri DSM 4166] Length = 254 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 73/191 (38%), Gaps = 26/191 (13%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 L + ++ + + L+ + + L V +G+ E + ++SI + Sbjct: 48 QKLEERQVQFEQEIEELKKAEQVRRTILDEAVEALRRRGIKVEVSENHTVLSIPNDLLG- 106 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST---------EVISIRGHTDASPFRN-IARDNW 285 FD + +IG+V+ + I I GHTD P + + + NW Sbjct: 107 -FDTGAYEIHSAYQARALEIGKVINEVISRDDRVEFLDTIFIEGHTDNRPLQGFMGKGNW 165 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISK-----------ISGFAHHRLKIASD-PMNS--AN 331 LS RA S +Q + E+++S+ +SG+ R +A N Sbjct: 166 GLSTFRAISLWQFWGDALAREEQLSRLNNKDGKPLFSVSGYGETRPAVADQVTEEDFKRN 225 Query: 332 RRIDILVEDRQ 342 RRIDI R+ Sbjct: 226 RRIDIRFTIRR 236 >gi|291615400|ref|YP_003525557.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1] gi|291585512|gb|ADE13170.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1] Length = 204 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F++ + E+I ++ I + + + + + GH + N LS+ RA Sbjct: 103 FEEDGAKLTAESINMIADIRQEITRRAAPEVVVTGHASR---AGMDETNLSLSMQRAKVV 159 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 VL+ GV +I ++ G + +RR++I V Sbjct: 160 RDVLVAGGVPA-QIIQVVGRGEFDPAATTQDGVAGPPSRRVEITVR 204 >gi|187918041|ref|YP_001883604.1| outer membrane protein [Borrelia hermsii DAH] gi|119860889|gb|AAX16684.1| outer membrane protein [Borrelia hermsii DAH] Length = 385 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 10/147 (6%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 I + + ++ + + E GI +S+ + F S + + L+ I Sbjct: 246 DNTIENEVKEYISTKQIDSIKIEKNENGIKLSLDIE-----FYPDSFQIIQKEYSKLKHI 300 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 +L I GHT + LS RA+S L+K V G Sbjct: 301 ANLLEKFKNNNILIEGHTAKFE---TEQAMQELSEKRAHSIGNYLLKMKVKNKNQIFFKG 357 Query: 315 FAHHRLK-IASDPMNSANRRIDILVED 340 + + K +S P+ S NRR++I + + Sbjct: 358 WGAKKPKYASSSPLASKNRRVEITILN 384 >gi|84514866|ref|ZP_01002229.1| OmpA domain protein [Loktanella vestfoldensis SKA53] gi|84511025|gb|EAQ07479.1| OmpA domain protein [Loktanella vestfoldensis SKA53] Length = 531 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 11/148 (7%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 L+ ++ D++ + T +L + T F SS + ++ ++A Sbjct: 381 RYLASILTDDVEVTLRQLRDMTQLLTAADRSSITFRFALGSSRLDARAQDDILRLANLIA 440 Query: 261 HSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL--MKSGVSEDRI-SKISG 314 S + G+TDA N LS RA Q L + ++ D + + G Sbjct: 441 TSDISNKELLLIGYTDAI---GDGASNLALSQQRAEEVRQALFAVAPSLASDDLPVRALG 497 Query: 315 FAHHRLKIASDPMNSA--NRRIDILVED 340 F ++ N NRR+++ + D Sbjct: 498 FGEISPLSCNETANGRRINRRVEVWLRD 525 >gi|268315730|ref|YP_003289449.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252] gi|262333264|gb|ACY47061.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252] Length = 211 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 59/183 (32%), Gaps = 16/183 (8%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQD---LAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + L+D I S ++ + V + Sbjct: 20 ATQRALVEQQAAHIAQLQDSLAVLRDSLAFYDYIDSGRYDQDMRSLRETVDRLRYELAVC 79 Query: 226 ----ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNI 280 + + + +F +S+ L + E LA E I G+TD P + Sbjct: 80 RDGGLRVAVELADDLFAPASATLTDRGRRRLDALAERLARFPEHRFRIEGYTDNVPIGDR 139 Query: 281 ----ARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRR 333 NW L+ RA + + ++ G+ +R ++ + R +D NRR Sbjct: 140 LKERFPSNWELAAARAATVARYFIEAHGLDPERF-EVVSYGPTRPIGPNDTPEGRRLNRR 198 Query: 334 IDI 336 + I Sbjct: 199 VVI 201 >gi|108761761|ref|YP_631366.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622] gi|108465641|gb|ABF90826.1| OmpA domain protein [Myxococcus xanthus DK 1622] Length = 449 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 33/284 (11%), Positives = 87/284 (30%), Gaps = 11/284 (3%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 K + + + + + +K ++ Sbjct: 174 KAEMTAAMADVAIPDVPDAGAPVAAVAQAPAKPTPPPVTAPISPTPPVATPVKTVEAPEQ 233 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 + + L+ + + + + + ++ + P + Sbjct: 234 GPVAPAKLLLKVLAGKRPAAATVYVKSATGAPQRVMVDRK------ARKPVEVMLPPGEY 287 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 ++ + + Q +S V+ + K + ++ + + +++ P F + Sbjct: 288 RLDVLSQGYLAQTRKVTLSREAVPTVSFTLAKAPVSKSQKVRLKKEVVELPRMPRFAEKQ 347 Query: 242 SIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + P T L + ++ + I GHTD A LS RA + + L+ Sbjct: 348 AAPRNGTTAGLALLMDMFVRDEKLRLRIEGHTDNRERPAAAAR-KTLSEARAAAVAKALV 406 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 +G+ RI + G R K + NRR++ ++ ++ Sbjct: 407 DAGLDASRIETV-GLGDTRPKAPNLLPRGRELNRRVEFVLVRKE 449 >gi|116748202|ref|YP_844889.1| OmpA/MotB domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697266|gb|ABK16454.1| OmpA/MotB domain protein [Syntrophobacter fumaroxidans MPOB] Length = 189 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + +D S + +L + L +++ GH D N L Sbjct: 81 ENQDIYYDYDSYVLTEPAKRILDEKISFLKRYARVRVTVEGHCDER---GTTEYNLALGE 137 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338 RA SA Q + SG+S ++ +S + R + + NRR ++ Sbjct: 138 RRANSALQYIRNSGLSIQNLTSVS-YGKERPAAMGHDEASWAKNRRAHFVL 187 >gi|190894192|ref|YP_001984486.1| hypothetical protein RHECIAT_PB0000226 [Rhizobium etli CIAT 652] gi|190699853|gb|ACE93936.1| hypothetical protein RHECIAT_PB0000226 [Rhizobium etli CIAT 652] Length = 429 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 69/172 (40%), Gaps = 8/172 (4%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 LPP + + ++ + ++ + L + + + V I++ I R Sbjct: 264 ATLPPNGVVRSARIALPPKVVMSSDRLRNFLEPEIREGL---VTVSEDPQQIVVII---R 317 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + MFD +S + +L +IG L + + + GHTDA P +++A + Sbjct: 318 ASGMFDSASPEVKKMFLPLLLRIGRSLNGESGSVLLTGHTDAIPVQSLAFPSNDSLSLAR 377 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 SA ++KS + + + G ++ + NRRI I++ Q Sbjct: 378 ASAAAEIIKSMMDDPGRVREEGRGSGEPVASNHTPEGRARNRRIQIIITKTQ 429 >gi|117922218|ref|YP_871410.1| chemotaxis protein MotB-like protein [Shewanella sp. ANA-3] gi|117614550|gb|ABK50004.1| chemotaxis protein MotB-related protein [Shewanella sp. ANA-3] Length = 243 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 69/191 (36%), Gaps = 30/191 (15%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 S++ +++ K+ ++ + I + +A V T + I +T Sbjct: 46 QKSEQIDASIEELKKAEEARRNILIDIKEELAKQ-NIHVEIVENDTVLRI----PESTLS 100 Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-----------HSTEVISIRGHTDASPFRNIARDNW 285 F+ T V + +A + + + GHTD++ + NW Sbjct: 101 FESGKDTLPENTTVKNEVRLIGIALHKAITTNERWKYLDTVFVEGHTDSNGIWYRGKGNW 160 Query: 286 RLSLDRAYSAYQ-VLMKSGVSED----------RISKISGFAHHRLKI---ASDPMNSAN 331 LS DRA S ++ + V+ + +SG+A R ++ + N Sbjct: 161 GLSTDRAVSIWKLWQTEINVAPKLSVLTNYNGQLLFSVSGYADTRRVDLQETTEEQRARN 220 Query: 332 RRIDILVEDRQ 342 RRIDI ++ Sbjct: 221 RRIDIRFTVKK 231 >gi|113970538|ref|YP_734331.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4] gi|113885222|gb|ABI39274.1| OmpA/MotB domain protein [Shewanella sp. MR-4] Length = 264 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 74/259 (28%), Gaps = 26/259 (10%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 + R S + + D G L + +L Sbjct: 21 SVSARVSLQNQPVLSEPQTEMLEQDEDDGEALIGLSGGALLGALVGGPVGAIIGGFTGTL 80 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 S D K+ ++ +++ L + Q ++ + L+ Sbjct: 81 IGQSVSDTDTVKTQQQHIALQRQQLASLSSKQQASEQRAAEYASTQKQLDELLAEQQQLL 140 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266 ++ + F SS + L + +V+ S+E + Sbjct: 141 SELALGM-------------------NVQFRTGSSELESHFLPQLDNVAKVMKRSSESNL 181 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 ++G+ D N LS R L+K GV+ +RI+ F Sbjct: 182 ELKGYADRR---GDLAYNQALSEQRLLEVRGYLIKQGVAPERITT-QAFGARMPLNDQQD 237 Query: 327 MNSA--NRRIDILVEDRQG 343 S +RR+ + ++ QG Sbjct: 238 SESDVFDRRVTLTMQPNQG 256 >gi|299136066|ref|ZP_07029250.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8] gi|298602190|gb|EFI58344.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8] Length = 269 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 32/241 (13%), Positives = 74/241 (30%), Gaps = 16/241 (6%) Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 G + Q L + + + + + + ++ ++ Sbjct: 29 GLSRQHPAIADLVPGLAVKVEGSYDGDHQLVAKKVTFSRTAMNTARQIDAGLHPVNQQVA 88 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISS--------TLSGLVADNIVKGVLFETTRTGILIS 227 + K ++ QD AK ++ + + R L Sbjct: 89 AAQDQLKSDRKDIEQNQQDTAKNSQDIDTTKQGLAVTTADTATNKQAIGQANQRFTTLDQ 148 Query: 228 IIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 D+ + T F + + L + A++ + ++G+ A A N Sbjct: 149 YEDKGSITVNFANGKATVSKKDKDQLTDFVKSAANTPGYMIEVQGYASAV---GSAALNQ 205 Query: 286 RLSLDRAYSAYQVLMKSGVSE-DRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 RLS +RA + ++ ++GV RI + ++ NRR+ + + + Sbjct: 206 RLSSERADAVLAIIQQTGVVPMTRILAPAAMGTTNPVSEDHTRSAHAQNRRVVVTIVVNK 265 Query: 343 G 343 G Sbjct: 266 G 266 >gi|224418201|ref|ZP_03656207.1| lipoprotein precursor [Helicobacter canadensis MIT 98-5491] gi|253827528|ref|ZP_04870413.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313141736|ref|ZP_07803929.1| lipoprotein [Helicobacter canadensis MIT 98-5491] gi|253510934|gb|EES89593.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313130767|gb|EFR48384.1| lipoprotein [Helicobacter canadensis MIT 98-5491] Length = 174 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 9/109 (8%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSL 289 F+ + + V+ VL + + + G+TD N+ L L Sbjct: 66 QNVFFNFDQFVIRADMQNVVDNDANVLKDVSAAPLSVRVEGNTDEW---GTDEYNYALGL 122 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 RA + + L+ GVSE +I +S + + + NR++ Sbjct: 123 KRAVAVKEALVAKGVSESKIVLVS-YGESKPTCTQKTRECWAENRKVTF 170 >gi|163784522|ref|ZP_02179384.1| flagellar motor protein MotB-like protein [Hydrogenivirga sp. 128-5-R1-1] gi|159880208|gb|EDP73850.1| flagellar motor protein MotB-like protein [Hydrogenivirga sp. 128-5-R1-1] Length = 234 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 62/157 (39%), Gaps = 13/157 (8%) Query: 195 LAKKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 + + ++ + + + ++ +LI + + F + S E L Sbjct: 72 MKEDVAKIIKKRLERILPIYAYQIDSIENYVLIRLFNDIA---FKEDSYQLTDEAKKALN 128 Query: 254 KIGEVLAHSTEVI---SIRGHT---DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 +I + + + + GH + S +D W LS+ RA +L+K+G+ +D Sbjct: 129 EIAKKIKKYSGYFDEIRVVGHAYVKNKSKLPRGIKDAWDLSIKRAEVIADILIKNGIKKD 188 Query: 308 RISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342 +I + + + + + + N R++I + +Q Sbjct: 189 KIV-LEAYGNKKPIYRWKNPILQRMNDRVEIYLNVKQ 224 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFN 70 + ++ P +W I ++D M++L+ FF++++ + D YF Sbjct: 3 RKKKEECPA-APAWLISFSDLMSLLLTFFILLYAMTVLDIKKLMKFLWYFQ 52 >gi|15645739|ref|NP_207916.1| peptidoglycan associated lipoprotein precursor (omp18) [Helicobacter pylori 26695] gi|2314278|gb|AAD08169.1| peptidoglycan associated lipoprotein precursor (omp18) [Helicobacter pylori 26695] Length = 179 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 6/106 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD L +I + + + + G+TD + N L + R S Sbjct: 78 FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 L+ GV +D I IS F + K A NRR+D+ + Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKLMK 179 >gi|84687224|ref|ZP_01015105.1| Outer membrane protein, OmpA/MotB family protein [Maritimibacter alkaliphilus HTCC2654] gi|84664812|gb|EAQ11295.1| Outer membrane protein, OmpA/MotB family protein [Rhodobacterales bacterium HTCC2654] Length = 647 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 80/267 (29%), Gaps = 15/267 (5%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 GK +++ S QNP K D +I + + +R Sbjct: 379 GKEIVSNSGDRIVVQNPDGTYQVLKNDDTILRQPGVVVSTKSYNDGSTRTVVERDNGVRI 438 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + K + + L T + +++++ P+ + Sbjct: 439 VTIRAADGTVLKRTRVMPNGDQYVLFDDTVEAQPVSQQDVQDYEPIDDIRASDSDEAALR 498 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + L + + V+ ++ + + FD S++ L Sbjct: 499 EALMASMDRDPGRTYSLRQVRQFSGVRDLAPVI-----EVDAITFDTGSAVIRSGQAEEL 553 Query: 253 QKIGEVLAHSTEV-----ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSE 306 +G+ + E I GHTDA A N LS RA S L + V Sbjct: 554 AALGQAIRSVIEERPDAVFLIEGHTDAV---GGAAYNLALSDRRAESVALALTEYFDVPP 610 Query: 307 DRISKISGFAHHRLKIASDPMNSANRR 333 + + G+ LKI + NRR Sbjct: 611 ENMIT-QGYGESELKIVTSEAERQNRR 636 >gi|312148404|gb|ADQ31063.1| outer membrane protein [Borrelia burgdorferi JD1] Length = 381 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S L + + I ++L I I GHT+ + + LS RA + Sbjct: 278 FYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQF---GLEEEMHELSEKRARAI 334 Query: 296 YQVLMKSGV-SEDRISKISGFAHHRLKIA-SDPMNSANRRIDILVED 340 L+K V +D+I G+ + K S P+ + NRR++I + + Sbjct: 335 GNYLIKMKVKDKDQIL-FKGWGSQKPKYPKSSPLKAKNRRVEITILN 380 >gi|265751275|ref|ZP_06087338.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263238171|gb|EEZ23621.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 397 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 7/114 (6%) Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279 + D F+ + + +L ++ +L + + I G+TDA Sbjct: 266 PVMVDTVFCDLLENIHFEFDKDVITLVSHKILDRLAALLKNYPDSHFLITGYTDAR---G 322 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 A+ N RLS RA + Y+ L++ GV + K GF + + P + N R Sbjct: 323 SAQYNLRLSERRAKAVYKALLERGV-PSHMLKWRGFGNRAALVP--PAAADNIR 373 >gi|297569008|ref|YP_003690352.1| peptidoglycan-associated lipoprotein [Desulfurivibrio alkaliphilus AHT2] gi|296924923|gb|ADH85733.1| peptidoglycan-associated lipoprotein [Desulfurivibrio alkaliphilus AHT2] Length = 194 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 7/111 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 +D S + L +L + + I G+TD N L R Sbjct: 88 MPVYYDFDRSNIRADQEERLVHNSNYMLDNPRVRVRIEGNTDER---GTREYNMALGERR 144 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340 A SA + L+ GV+ +R+ +S + R + S NRR D ++ Sbjct: 145 ALSAKKYLIDLGVAAERLETLS-YGEERPISFGRDELSWSLNRRSDFVIIR 194 >gi|218675048|ref|ZP_03524717.1| OmpA family membrane protein [Rhizobium etli GR56] Length = 500 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 13/185 (7%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 D ++ + LPP+ L D + LS + + + + Sbjct: 306 EDPDRGYFDDPGADLPPMRLRVPLNDYIIDTSSDPDRDYYEFLSEPPVEQVERVYSLDEV 365 Query: 221 RTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHT 272 + I +T F S+ L+K+ + + +E I GHT Sbjct: 366 KYSARIRDKVRRIDLDTITFATGSAEIPMTQARTLRKVADAINQVLEKDPSETFLIEGHT 425 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSAN 331 DA + N LS RA S VL G++ + + G+ LK+ + N Sbjct: 426 DAV---GSDQSNLILSDQRAESVANVLTDVYGIAPENL-ATQGYGERYLKVNTSDPEQEN 481 Query: 332 RRIDI 336 RR+ I Sbjct: 482 RRVTI 486 >gi|261492650|ref|ZP_05989203.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494601|ref|ZP_05991082.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309713|gb|EEY10935.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311809|gb|EEY12959.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 268 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 14/113 (12%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + + V+ + + L S + + + G+TD A N LS R Sbjct: 127 GDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRL---GSAAYNLDLSQRR 183 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDI 336 + + L++ GV+ +I + G+ A D NRR++I Sbjct: 184 SNTVKARLVQQGVTA-QIEAV-GYGKANQVKACDGETGQELKDCLRPNRRVEI 234 >gi|317012903|gb|ADU83511.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori Lithuania75] Length = 179 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 67 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K NRR+D+ + Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177 >gi|317486269|ref|ZP_07945101.1| peptidoglycan-associated lipoprotein [Bilophila wadsworthia 3_1_6] gi|316922439|gb|EFV43693.1| peptidoglycan-associated lipoprotein [Bilophila wadsworthia 3_1_6] Length = 165 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 7/113 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 FD S E+ +L++ E++ + I G+ DA N L Sbjct: 57 DGIVYFDFDKSDIKAESRDMLRQKAELMKAYPSIRVRIEGNCDAR---GTQEYNLALGER 113 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDR 341 RA +AY+ L+ GV+ D++ IS F R + + NRR D V + Sbjct: 114 RARAAYEYLVMLGVNPDQMEMIS-FGKERPAVEGTGPAVWAKNRRDDFRVIAK 165 >gi|308062402|gb|ADO04290.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori Cuz20] Length = 179 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 67 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K NRR+D+ + Sbjct: 124 ALGVKRTLSVKNALIIKGVEKDMIKTIS-FGETKPKCTQKTRECYRENRRVDVKL 177 >gi|320107635|ref|YP_004183225.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4] gi|319926156|gb|ADV83231.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4] Length = 249 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 59/201 (29%), Gaps = 8/201 (3%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 ++ + L K T ++ ++ + A + A + + Sbjct: 38 RSQTAPIVAQTNQLEKRTGDDQRNIQDTDARAQQGIAGAKSAAATADQHAMAAGQSADAA 97 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + D + T G+ + F ++ L + L + Sbjct: 98 NVNAKDAYNRVDSLAGTVAGLDKYKPLSDVSVTFRFDKAVLTAADKKELDAVASSLQTTR 157 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLK 321 + + G TDA A N+ LS RA + L K + + + G + Sbjct: 158 HYLLEVTGGTDAV---GDAAYNYALSQRRADAVVTYLAAKYNIPPHKFYMV-GIGKDQEV 213 Query: 322 IASDPM--NSANRRIDILVED 340 + + NRR+ + V Sbjct: 214 ATNKTAAGRAKNRRVQVRVLS 234 >gi|148251854|ref|YP_001236439.1| OmpA family protein [Bradyrhizobium sp. BTAi1] gi|146404027|gb|ABQ32533.1| putative exported protein of unknown function with OmpA family domain [Bradyrhizobium sp. BTAi1] Length = 727 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 10/127 (7%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRG 270 + + + NT F+ S P+ + LQ I + L EV I G Sbjct: 580 EVRYSPSVRQLMPSIDLNTITFETGSWEIGPDQVAKLQVIADGLNQAIQRNPREVFLIEG 639 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS 329 HTDA DN LS RA S +L + GV + ++ G+ LK + + Sbjct: 640 HTDAV---GNETDNLSLSDRRAESVATLLTQQFGVPAENLTS-QGYGEQYLKEQTQGPSR 695 Query: 330 ANRRIDI 336 NRR+ + Sbjct: 696 INRRVTV 702 >gi|325525466|gb|EGD03280.1| flagellar motor protein MotB [Burkholderia sp. TJI49] Length = 109 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 37/59 (62%) Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 NW LS DRA ++ + L+ G+ E ++ ++ G A + +DP++ NRRI ++V +R+ Sbjct: 1 NWELSADRANASRRELIAGGMDEAKVMRVIGLASTQNLNKADPLDPENRRISVIVLNRK 59 >gi|258620771|ref|ZP_05715806.1| Outer membrane protein A [Vibrio mimicus VM573] gi|258586969|gb|EEW11683.1| Outer membrane protein A [Vibrio mimicus VM573] Length = 213 Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 10/149 (6%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++ + L+ + L + +N + + I + +NT FD Sbjct: 47 APQLNTAGVQGPLKQVRTSSYEALRQFLLNNGIDHEIMPGDYPMIKL-----KNTIKFDT 101 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S+ ++ L ++ + LA + + + GHTD + + N LS RA S Sbjct: 102 GSAKVSVQSKQWLDRMAQFLASESGIDIVLEGHTDNT---GAQKFNDTLSEKRASSVKTA 158 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPM 327 L++ V+++ I G+ H + Sbjct: 159 LVQRQVAQNAIYT-RGYGEHVPACTNKTK 186 >gi|90579158|ref|ZP_01234968.1| Putative sodium-type flagellar protein MotY [Vibrio angustum S14] gi|90439991|gb|EAS65172.1| Putative sodium-type flagellar protein MotY [Vibrio angustum S14] Length = 297 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 18/155 (11%), Positives = 49/155 (31%), Gaps = 8/155 (5%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 +++ + L +S+ + + + I+ + ++S Sbjct: 143 QDWQRQNRSLEVGLSAVAFQKGYQSFSQCLSKLLPYGFEDIAFSVLH----YSENSDTLN 198 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L +I + + +S ++ + +S RA Q G+ Sbjct: 199 KISQQRLAQIADFVRYSDDIDLVLVAAFNDSIAGTTES-QEMSERRAEKLRQYFQSLGLP 257 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 +R+ ++ + R + NRR+ I + Sbjct: 258 AERV-QVEAYGKRRPIADNSTPMGRNLNRRVVISL 291 >gi|304320152|ref|YP_003853795.1| OmpA family protein [Parvularcula bermudensis HTCC2503] gi|303299055|gb|ADM08654.1| OmpA family protein [Parvularcula bermudensis HTCC2503] Length = 397 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 7/106 (6%) Query: 235 PMFDKSSSIPLPETIVVLQ-KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S ++ + E + ++++G+TD A N LS RA Sbjct: 293 VYFDYDKSNLTDAANTLIAARAEEAIDADVASVTVQGNTDT---AGSASYNQALSARRAK 349 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 L+ +GV + I + + NRR ++ Sbjct: 350 VVSDALVANGVDQSAI-TVEALGESNPAKPTGDGVREPLNRRTEVT 394 >gi|262274549|ref|ZP_06052360.1| sodium-type flagellar protein MotY precursor [Grimontia hollisae CIP 101886] gi|262221112|gb|EEY72426.1| sodium-type flagellar protein MotY precursor [Grimontia hollisae CIP 101886] Length = 292 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 8/106 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294 +D++ + ++ L +I E + +S ++ + +TD N RLS RA Sbjct: 186 YDENGAELNKASMARLAQIAEFVRYSPDIDLVLMATYTDNR---GAKVANQRLSEIRAQK 242 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 M G+ +DRI ++ + R ++ + NRR+ I + Sbjct: 243 LEAYFMSLGLPKDRI-QVEAYGERRPIAENESPIGRNKNRRVVISL 287 >gi|119947169|ref|YP_944849.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37] gi|119865773|gb|ABM05250.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37] Length = 295 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 10/133 (7%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDK--SSSIPLPETIVVLQKIGEVLAHSTEVISI- 268 + V F + + ++ N F+ + L K+ + + V+ I Sbjct: 156 KETVSFNQCANQLPVINYEEINQLSFNYIENQYKLNKTQTKDLVKLSDYINKDQSVVKIL 215 Query: 269 -RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 GH+D + N RLS RA Q L+ + V+ D + +I G ++D Sbjct: 216 IDGHSDKY---GNSSQNLRLSKFRADEIAQTLINNSVNMD-LIEIRGHGGRYPIASNDSA 271 Query: 328 NSA--NRRIDILV 338 NRR+ I + Sbjct: 272 EGREKNRRVSIRL 284 >gi|119387029|ref|YP_918084.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans PD1222] gi|119377624|gb|ABL72388.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222] Length = 711 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 74/253 (29%), Gaps = 10/253 (3%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 N +R D S N++ + GS + + + L Sbjct: 451 NTGDRVVVTLPDGSQQVIKDDNTLLYRPGSNVRTETFDDGSTRTTVLREDGSRVVTIRDA 510 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 + + + + I+ E + + ++ + D A + Sbjct: 511 NMNILRRTLMRADGTETRLIDDTEAQPVQISTLPAPPPVRINRERLDEAALREALRREAA 570 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-- 265 D + FD SS P+ L +G+V+ S + Sbjct: 571 IDRRFSLGQIRNIPEVRALVAPVNVPEITFDTGSSAITPDQAQELATLGKVIRDSIDQDP 630 Query: 266 ---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK 321 I G+TDA N LS RA S L + V + + + G+ L Sbjct: 631 REIYMIEGYTDAV---GSDAANLALSDRRAESVALALTEYFQVPPENMV-VQGYGEQFLL 686 Query: 322 IASDPMNSANRRI 334 + +D NRR+ Sbjct: 687 VPTDGPERQNRRV 699 >gi|95930151|ref|ZP_01312890.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684] gi|95133845|gb|EAT15505.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684] Length = 629 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 31/110 (28%), Gaps = 11/110 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ + L ++ + + + G D N LS R Sbjct: 526 FKSGSTELDNRALRDLDRLVDFMHQGRNRYRPLMLFGFADNI---GENDVNQVLSEKRTR 582 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 L G++ + G + NRR+++ + + Sbjct: 583 KVSTALQSRGLNAK---VVMGLGEAMPVADNATSAGREKNRRVEVWISEP 629 >gi|209525121|ref|ZP_03273665.1| OmpA/MotB domain protein [Arthrospira maxima CS-328] gi|209494530|gb|EDZ94841.1| OmpA/MotB domain protein [Arthrospira maxima CS-328] Length = 322 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 7/118 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + ++ ++ + + I + N F+ S+ P+ + ++ +I E L Sbjct: 179 AQIIPAAFDNIPGVKSVFSTLKIDPVRIENRIYFNFGSAQINPQDMKIITRITEFLDQYP 238 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + I GHTD R A N +L+L+RA + L K G+ R+ + + + Sbjct: 239 KLSLRIIGHTD---LRGSAAINQQLALNRATAVRDALTKQGIDPKRLEIV---GNAQP 290 >gi|213163752|ref|ZP_03349462.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 196 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 8/124 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL + +++ G+TD++ N RLS RA S L+ GV RI + SG Sbjct: 137 VLKEYPKTAVNVVGYTDST---GSHDLNMRLSQQRADSVASSLITQGVDASRI-RTSGMG 192 Query: 317 HHRL 320 Sbjct: 193 PANP 196 >gi|332534695|ref|ZP_08410524.1| OmpA/MotB domain protein [Pseudoalteromonas haloplanktis ANT/505] gi|332035845|gb|EGI72328.1| OmpA/MotB domain protein [Pseudoalteromonas haloplanktis ANT/505] Length = 432 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS + I + ++ + L + + I+GH + N +LS RA++ Sbjct: 328 FSADSSDVRSQYIQEISRLADFLKENPTKQVEIQGHAS---LDGDRKYNRKLSEKRAFAV 384 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 ++L+K V R+ G+ + ++ N+ANRRI+ ++ D Sbjct: 385 AEILIKQFDVEPKRVKSF-GYGIDQPRVNEISVRANAANRRIEAVITD 431 >gi|158422404|ref|YP_001523696.1| OmpA family protein [Azorhizobium caulinodans ORS 571] gi|158329293|dbj|BAF86778.1| OmpA family protein [Azorhizobium caulinodans ORS 571] Length = 199 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 69/177 (38%), Gaps = 15/177 (8%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKI----SSTLSGLVADNIVKGVLFETTRTGILIS 227 + P ++ + + + L +L + +++L D+ + R + I Sbjct: 17 SAAAPLAAQTDLSNAQIVQGLNNLTQDAPVVTAASLRQAALDHATMYSGPPSQRPPLAIQ 76 Query: 228 IIDQRN---TPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIA 281 + F +S+I LP++ + I + L + + G+TD + Sbjct: 77 LDKLAQINVQIQFKLNSAIILPDSYATIGAIADALHNPVLQGYRFIVTGNTDTT---GTR 133 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 N +LS +RA + + L + V+ R+ + G L+ +P + NRR+ I Sbjct: 134 EHNLKLSQERADAVVEALTTTFNVNPARLEAV-GLGEEALQDTKNPESPVNRRVQIF 189 >gi|90409039|ref|ZP_01217166.1| sodium-type flagellar protein MotY [Psychromonas sp. CNPT3] gi|90309846|gb|EAS38004.1| sodium-type flagellar protein MotY [Psychromonas sp. CNPT3] Length = 232 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 10/140 (7%) Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPM--FDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 + + F + +L D + + K+ + L+ IG+ + + + Sbjct: 96 NFLKSYDEFNNCISNLLPYNFDDIAYSILKYAKNGVQLDTFSKKRLKMIGDYIQYDENIS 155 Query: 267 SI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I G++DA N LS RA + L + G+ D+I +++ F + Sbjct: 156 VILLSGYSDAY---GTESHNMALSTKRAEAIKSYLKEIGMQSDKI-QVASFGEKHHVADN 211 Query: 325 DP--MNSANRRIDILVEDRQ 342 NRR+ I +E + Sbjct: 212 SNILGRIQNRRVVISIEREE 231 >gi|116327088|ref|YP_796808.1| endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332255|ref|YP_801973.1| endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119832|gb|ABJ77875.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125944|gb|ABJ77215.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 242 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 + ++ N W + YAD +T+L+ F++M+ I+ D K + Sbjct: 11 RAHRKGESHENRERWLLTYADMITLLLGLFIIMYSISQVDQAKLKQVAD 59 >gi|305666576|ref|YP_003862863.1| OmpA/MotB family outer membrane protein [Maribacter sp. HTCC2170] gi|88708847|gb|EAR01082.1| outer membrane protein, OmpA/MotB family [Maribacter sp. HTCC2170] Length = 393 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 65/194 (33%), Gaps = 12/194 (6%) Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 K L + + + ++ +E + ++ K+ + +A Sbjct: 203 KGLTRKGEKKLALIQEMEKEQQRVQDSLANELRIKEEATLAQRLAKEKEKARLAAIEKAR 262 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTD 273 + E R L + I + F +SS + VL + +L + I HTD Sbjct: 263 IDAENQRKQQLENSIKELGLVYFGFNSSYLNKNSKSVLGLLANLLKEKPSVHLKITSHTD 322 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDP 326 + + N LS R LM G+SE+R+ F +L S Sbjct: 323 SR---GASDYNKWLSERRVERTKNYLMSIGISENRLVA-EAFGEEQLTNECGDGVRCSAE 378 Query: 327 MNSANRRIDILVED 340 + NRR + V + Sbjct: 379 KHRKNRRSEFEVTE 392 >gi|330948387|gb|EGH48647.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B] Length = 64 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 N LS RA S L GV + + + G + ++ + NRR+++ ++ Sbjct: 1 NMDLSQQRAQSVATYLTSQGVDQAHL-SVRGAGPDQPIASNADVNGRAQNRRVEVNLKPI 59 Query: 342 QG 343 G Sbjct: 60 PG 61 >gi|163756036|ref|ZP_02163152.1| OmpA/MotB [Kordia algicida OT-1] gi|161323910|gb|EDP95243.1| OmpA/MotB [Kordia algicida OT-1] Length = 277 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 68/206 (33%), Gaps = 11/206 (5%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 + S R + L + + + ++E P K K+ + ++ S Sbjct: 73 ELSENRATTVANYLKEHYESFINSIEQEAKGELPTETTKQNERIGVKKHRKVSISASKND 132 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + + + F + + L+K+ L + Sbjct: 133 HKPKVVERKENIYV-VPINELRVGNTYALGKINFKTGRVTLIKSSKKELEKLVRFLKKNR 191 Query: 264 E-VISIRGHTDASPFRNIARDNWR-----LSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 I ++GH + N LS+DRA Y+ L+ G+S++R+ G+A Sbjct: 192 NIHIEVQGHVCCGGDDDSDALNSETGTETLSVDRARFIYKYLISRGISKERL-TYKGYAF 250 Query: 318 HRLK---IASDPMNSANRRIDILVED 340 SANRR++I + Sbjct: 251 KAPLRFPEKGSRDRSANRRVEIEITK 276 Score = 45.3 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 4/77 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNW 285 + FD + + L +T + G+TD F + N Sbjct: 16 QAQEIEFDIYFDSGKFTLSSQHQKKINTQLADLDSTTTYNFVIKGYTD---FVDTEHFNL 72 Query: 286 RLSLDRAYSAYQVLMKS 302 LS +RA + L + Sbjct: 73 ELSENRATTVANYLKEH 89 >gi|307256515|ref|ZP_07538296.1| hypothetical protein appser10_5200 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864925|gb|EFM96827.1| hypothetical protein appser10_5200 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 283 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 20/126 (15%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + V+ + L S E + + G+TD + N LS R Sbjct: 141 GDFLFDFDKDTLTAKGKDVVDNVAAQLKSSKAEQVKVAGYTDRL---GSEKYNLDLSQRR 197 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSA-------NRRIDI-----L 337 A L++ GV+ + I+ + G+ + A D P NRR+++ + Sbjct: 198 ANMVKARLVQQGVTAN-INAV-GYGKAQQVKACDGIPHGQELKDCLRPNRRVEVTANGGV 255 Query: 338 VEDRQG 343 ++ +G Sbjct: 256 LKQNEG 261 >gi|303250252|ref|ZP_07336452.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252017|ref|ZP_07533917.1| hypothetical protein appser6_5360 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650868|gb|EFL81024.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860486|gb|EFM92499.1| hypothetical protein appser6_5360 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 283 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 20/126 (15%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + V+ + L S E + + G+TD + N LS R Sbjct: 141 GDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRL---GSEKYNLDLSQRR 197 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSA-------NRRIDI-----L 337 A L++ GV+ + I+ + G+ + A D P NRR+++ + Sbjct: 198 ANMVKARLVQQGVTAN-INAV-GYGKAQQVKACDGIPHGQELKDCLRPNRRVEVTANGGV 255 Query: 338 VEDRQG 343 ++ +G Sbjct: 256 LKQNEG 261 >gi|126207944|ref|YP_001053169.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae L20] gi|165975919|ref|YP_001651512.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149806|ref|YP_001968331.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307245299|ref|ZP_07527387.1| hypothetical protein appser1_5040 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254248|ref|ZP_07536089.1| hypothetical protein appser9_4990 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258710|ref|ZP_07540442.1| hypothetical protein appser11_5080 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260944|ref|ZP_07542627.1| hypothetical protein appser12_5120 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263126|ref|ZP_07544747.1| hypothetical protein appser13_5480 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126096736|gb|ABN73564.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876020|gb|ABY69068.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914937|gb|ACE61189.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306853640|gb|EFM85857.1| hypothetical protein appser1_5040 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862795|gb|EFM94748.1| hypothetical protein appser9_4990 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867061|gb|EFM98917.1| hypothetical protein appser11_5080 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869356|gb|EFN01150.1| hypothetical protein appser12_5120 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871488|gb|EFN03211.1| hypothetical protein appser13_5480 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 283 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 20/126 (15%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + V+ + L S E + + G+TD + N LS R Sbjct: 141 GDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRL---GSEKYNLDLSQRR 197 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSA-------NRRIDI-----L 337 A L++ GV+ + I+ + G+ + A D P NRR+++ + Sbjct: 198 ANMVKARLVQQGVTAN-INAV-GYGKAQQVKACDGIPHGQELKDCLRPNRRVEVTANGGV 255 Query: 338 VEDRQG 343 ++ +G Sbjct: 256 LKQNEG 261 >gi|53728845|ref|ZP_00134888.2| COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 294 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 20/126 (15%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + V+ + L S E + + G+TD + N LS R Sbjct: 152 GDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRL---GSEKYNLDLSQRR 208 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSA-------NRRIDI-----L 337 A L++ GV+ + I+ + G+ + A D P NRR+++ + Sbjct: 209 ANMVKARLVQQGVTAN-INAV-GYGKAQQVKACDGIPHGQELKDCLRPNRRVEVTANGGV 266 Query: 338 VEDRQG 343 ++ +G Sbjct: 267 LKQNEG 272 >gi|188995160|ref|YP_001929412.1| putative OmpA family protein [Porphyromonas gingivalis ATCC 33277] gi|188594840|dbj|BAG33815.1| putative OmpA family protein [Porphyromonas gingivalis ATCC 33277] Length = 672 Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 44/140 (31%), Gaps = 34/140 (24%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 ++D + PE++ L ++ +L + ++ + H D + N LS R Sbjct: 535 QNILYDFDKATLRPESMKSLDELIRILTDNPDIRIELGSHADR---KGPDAYNLGLSDRR 591 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------------------PMN 328 A S L G++ DR+ G+ K + Sbjct: 592 AKSVVDYLTSRGIAADRL-TWKGYGKSVPKTVTAKIAERHDFLKEGDVLTEEFVAPLTEE 650 Query: 329 SA------NRRIDILVEDRQ 342 NRR + V + + Sbjct: 651 QQSVCDQLNRRTEFRVIEEE 670 >gi|308184866|ref|YP_003928999.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori SJM180] gi|308060786|gb|ADO02682.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori SJM180] Length = 179 Score = 69.2 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD L +I + + + + G+TD + N L + R S Sbjct: 78 FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L+ GV +D I IS F + K NRR+D+ + Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177 >gi|117920854|ref|YP_870046.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3] gi|117613186|gb|ABK48640.1| OmpA/MotB domain protein [Shewanella sp. ANA-3] Length = 264 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 74/259 (28%), Gaps = 26/259 (10%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 + R S + + D G L + +L Sbjct: 21 SVSARVSLQNQPVLSEPQTEMLEQDEDDGEALIGLGGGALLGALVGGPVGAIIGGFTGTL 80 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 S D K+ ++ +++ + + Q ++ + L+ Sbjct: 81 IGQSVSDTDTVKTQQQHIALQRQQLASISAKQQASEQRAAEYASTQKQLDELLAEQQQLL 140 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266 ++ + F SS + L + +V+ S+E + Sbjct: 141 SELALGM-------------------NVQFRTGSSELESHFLPQLDNVAKVMKRSSESNL 181 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 ++G+ D N LS R L+K GV+ +RI+ F Sbjct: 182 ELKGYADRR---GDLAYNQALSEQRLLEVRGYLIKQGVAPERITT-QAFGARMPLNDQQD 237 Query: 327 MNSA--NRRIDILVEDRQG 343 S +RR+ + ++ QG Sbjct: 238 SESDVFDRRVTLTMQPNQG 256 >gi|307318588|ref|ZP_07598022.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83] gi|306895928|gb|EFN26680.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83] Length = 489 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 66/197 (33%), Gaps = 13/197 (6%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 E + ++ + Y LPP+ + +D + LS Sbjct: 284 GGEEYVMMYAPEYEEDRPTIVDVGYDLPPMRLSIPVDEYIVDVAEDPDRDYYEFLSEPPV 343 Query: 209 DNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----A 260 + + + + R + +T F S+ ++ + E + Sbjct: 344 EPVERVYTIDEVRHSARLRDKVRRIDLDTITFATGSAEVSMSQAKTMRNVAEAMNKVLEK 403 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 E I GHTDA + N LS +RA S +L + G+ + + G+ Sbjct: 404 DPGETFFIEGHTDAV---GADQSNLVLSDERAESVAVLLTEVYGIPAENLVT-QGYGERF 459 Query: 320 LKIASDPMNSANRRIDI 336 LKI +D NRR+ I Sbjct: 460 LKIRTDGPEQENRRVTI 476 >gi|298735871|ref|YP_003728396.1| peptidoglycan-associated lipoprotein [Helicobacter pylori B8] gi|298355060|emb|CBI65932.1| peptidoglycan-associated lipoprotein [Helicobacter pylori B8] Length = 179 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 67 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K A NRR+D+ + Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 177 >gi|332534626|ref|ZP_08410458.1| putative component of sodium-driven polar flagellar motor [Pseudoalteromonas haloplanktis ANT/505] gi|332035906|gb|EGI72387.1| putative component of sodium-driven polar flagellar motor [Pseudoalteromonas haloplanktis ANT/505] Length = 292 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 10/156 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPET 248 + Q+ A KI+ +S + + + S D T M + +SS + Sbjct: 141 QDWQNSADKIAVGISSVNFKQ-AYWAFLQCRDELLPYSFEDISFTVMNYQSNSSKLTKSS 199 Query: 249 IVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 L KI E L + S E ISI +TD+ +N LS RA + ++ GV E Sbjct: 200 QQRLDKIAEYLKNDASIESISIDSYTDSY---GGRWNNLDLSRKRAKTIKDYMVSLGVDE 256 Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 ++ +G R +D NRR+ I +E Sbjct: 257 AKVQT-TGLGEKRFVDNNDNILGRDKNRRLIIQIEK 291 >gi|315497902|ref|YP_004086706.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48] gi|315415914|gb|ADU12555.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48] Length = 407 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 9/116 (7%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDN 284 + + F+ S + ++Q+ + + + + GH D A N Sbjct: 294 VKYEAREFIVYFEFDQSTLTADAQAIVQQAADYAKAGNATRVVVVGHADT---SGSAAYN 350 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR--IDI 336 RLS RA + L GVS I + +A+ NRR IDI Sbjct: 351 IRLSERRAKTVADALAGLGVSGS-ILAVDWKGESAPAVATGDGVKEPLNRRSTIDI 405 >gi|45659158|ref|YP_003244.1| hypothetical protein LIC13339 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602404|gb|AAS71881.1| MotB [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 242 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 K +++ N W + YAD +T+L+ F++M+ I+ D K + Sbjct: 11 KGHRKEESHENRERWLLTYADMITLLLGLFIIMYSISQVDQTKLKQVAD 59 >gi|317011324|gb|ADU85071.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori SouthAfrica7] Length = 182 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 70 IESGTIIASIYFDFDKYEIKDSDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 126 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K NRR+D+ + Sbjct: 127 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGEAKPKCTQKTRECYKENRRVDVKL 180 >gi|95117797|gb|ABF57086.1| Omp22 [Helicobacter pylori] Length = 179 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 67 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K NRR+D+ + Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177 >gi|227539888|ref|ZP_03969937.1| OmpA/MotB [Sphingobacterium spiritivorum ATCC 33300] gi|227240166|gb|EEI90181.1| OmpA/MotB [Sphingobacterium spiritivorum ATCC 33300] Length = 446 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 37/272 (13%), Positives = 82/272 (30%), Gaps = 25/272 (9%) Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS--- 140 D Q+P + D+ + E + ++ R L Sbjct: 185 SDIQSPAVETPIPPADIPVVEPPVLTVPPVNPEPAIHTREAVREVKKSSGLWWILIPLVL 244 Query: 141 --------EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + C + S+ + ++ + + + IL + + L Sbjct: 245 VALWFLFGKSCAGNGAGTSDSTSNGRDTSSMTNPSDSLGATDGLSNRESVILKLPDGQEL 304 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + I L + + + F+ ++ LP + L Sbjct: 305 RAYPRGIEDNLIKFLQSDYKALPDDTLKNKW------FDFDNLNFETGTAKILPASRDQL 358 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + +L + + I G+TD + N +LSLDRA + L + G+ +++ Sbjct: 359 LNLAAILKVFPDAKVKIGGYTDKT---GDEAFNKKLSLDRANAVKVFLDEQGLGA-QVAG 414 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDILVED 340 G+ A + +RR+ + V Sbjct: 415 TEGYGSEIARYPADAPESDRIKDRRVSVSVRK 446 >gi|325205456|gb|ADZ00909.1| ompA family protein [Neisseria meningitidis M04-240196] Length = 244 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F E L+ + + L + + + + GHTD F + N LS RAY Sbjct: 106 LFGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTD---FMGSDKYNQALSERRAYV 162 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 L+ +GV RIS + G + Sbjct: 163 VANNLVSNGVPVSRISAV-GLGESQ 186 >gi|54294009|ref|YP_126424.1| hypothetical protein lpl1070 [Legionella pneumophila str. Lens] gi|53753841|emb|CAH15307.1| hypothetical protein lpl1070 [Legionella pneumophila str. Lens] Length = 234 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 62/195 (31%), Gaps = 49/195 (25%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K++ ++ + L + +GV ++ + + +F Sbjct: 38 QSATKKVTEINESRDKILKEIEQSLKQEGVSVTIDIEQGVLRLPES---ILFGVDQYQVN 94 Query: 246 PETIVVLQKIGEVLAHSTEVI-------------------------SIRGHTDASPFRNI 280 E + L K+ VL + I GHTD++ Sbjct: 95 EEGKIALSKLASVLEKYLPCMAVTEEKFKSQCESLNLTSRDGLDAVFIEGHTDST---GS 151 Query: 281 ARDNWRLSLDRAYSAYQVLMK------------SGVSEDRISKISGFAHHRLKIASDPMN 328 + NW LS RA S + L+ +G+ I +SG+ R ++ Sbjct: 152 SEHNWYLSARRAISVFNELIDAKPLLNVGLKNINGIP---ILNVSGYEARRPIDPNN--L 206 Query: 329 SANRRIDI-LVEDRQ 342 S NRRI++ + Sbjct: 207 SVNRRIELRFIMRSP 221 >gi|300774087|ref|ZP_07083956.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861] gi|300760258|gb|EFK57085.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 446 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 37/272 (13%), Positives = 82/272 (30%), Gaps = 25/272 (9%) Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS--- 140 D Q+P + D+ + E + ++ R L Sbjct: 185 SDIQSPAVETRIPPADIPVVEPPVLTVPPVNPEPAIHTREAVREVKKSSGLWWILIPLVL 244 Query: 141 --------EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + C + S+ + ++ + + + IL + + L Sbjct: 245 VALWFLFGKSCAGNGAGTSDSTSNGRDTSSMTNPADSLGAADGLSNRESVILKLPDGQEL 304 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + I L + + + F+ ++ LP + L Sbjct: 305 RAYPRGIEDNLIKFLQSDYKALPDDTLKNKW------FDFDNLNFETGTAKILPASRDQL 358 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + +L + + I G+TD + N +LSLDRA + L + G+ +++ Sbjct: 359 LNLAAILKVFPDAKVKIGGYTDKT---GDESFNKKLSLDRANAVKVFLDEQGLGA-QVAG 414 Query: 312 ISGFAH---HRLKIASDPMNSANRRIDILVED 340 G+ A + +RR+ + V Sbjct: 415 TEGYGSEIARYPADAPESDRIKDRRVSVSVRK 446 >gi|94499424|ref|ZP_01305961.1| OmpA family protein [Oceanobacter sp. RED65] gi|94428178|gb|EAT13151.1| OmpA family protein [Oceanobacter sp. RED65] Length = 465 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 54/147 (36%), Gaps = 15/147 (10%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 +++ + + L + + + I+ F + S+ + + +Q+ Sbjct: 332 ISQNVEAMDVALPDELPQDYLAMVKNAKRLSINFR-------FKEGSAKLDNKALKDIQR 384 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + + + + G D + ++ LS RA + + L + G+ D + Sbjct: 385 LAYYMTEHPQQELVLIGFGDRRKNKERSKL---LSKLRAMAVRRELSRLGIYPD---EAE 438 Query: 314 GFAHHRLKIASDPMNS-ANRRIDILVE 339 G+ + A + + NRR+++ + Sbjct: 439 GYGEYNPVAAFEQSAATKNRRVEVWLR 465 >gi|330013026|ref|ZP_08307548.1| OmpA family protein [Klebsiella sp. MS 92-3] gi|328533612|gb|EGF60326.1| OmpA family protein [Klebsiella sp. MS 92-3] Length = 90 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 7/77 (9%) Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIA 323 + GHTD N LSL RA S + V + G + Sbjct: 15 HSRLEGHTDNY---GEDSYNEALSLKRANSVADAWAEGAHVPRSNLVT-RGLGKKYPIAS 70 Query: 324 SDPM--NSANRRIDILV 338 +D + NRR+ +++ Sbjct: 71 NDTAAGRAENRRVTVVI 87 >gi|4098205|gb|AAD09577.1| Omp22 [Helicobacter pylori] Length = 179 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 8/144 (5%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 +S+ ++ + + + + + FD L +I Sbjct: 40 APVSTEIAQEKQEPKQEPAPVVEEKP--AVESGTIIASIYFDFDKYEIKESDQETLDEIV 97 Query: 257 EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + + + + G+TD + N L + R S L+ GV +D I IS F Sbjct: 98 QKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVKNALVIKGVEKDMIKTIS-FG 153 Query: 317 HHRLKIASDPMN--SANRRIDILV 338 + K NRR+D+ + Sbjct: 154 ETKPKCTQKTRECYKENRRVDVKL 177 >gi|315180476|gb|ADT87390.1| hypothetical protein vfu_A02253 [Vibrio furnissii NCTC 11218] Length = 271 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 8/109 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEV--LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F L+ I E+ + + I GH+D+ N +S RA Sbjct: 167 FQSGVLALTQNQRSQLEAISELVLFDPKIKTVRITGHSDS---HGDTVVNLSVSRRRADD 223 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 +M +GV + + +I G + NRR++I + R Sbjct: 224 VAYWMMMAGVPTE-MMEIRGQGGRYPVGNNATEEGRLANRRVEIELVRR 271 >gi|315181670|gb|ADT88583.1| outer membrane protein, hypothetical [Vibrio furnissii NCTC 11218] Length = 208 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 7/116 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q+ +F +SS P + ++++ + L E I ++G+ A N LS Sbjct: 83 QKLHILFANNSSTIPPVFMNQIRQMADFLKLFPEASIELQGYASKV---GKADHNLALSK 139 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 R+ + L++ GV+ RI +I G+ L + + ++ NRR+ V +G Sbjct: 140 QRSEAVRLQLLRFGVTPKRI-RIVGYGDTVLAVNGEDQVSHAQNRRVTASVVGFKG 194 >gi|260911408|ref|ZP_05917999.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295] gi|260634455|gb|EEX52554.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295] Length = 686 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 34/145 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I+ + +D PE+ L ++ ++L + I + H D +R N Sbjct: 512 ITAPVLIDNIFYDLDKYTLRPESKQALDELVKLLNENPNVTIELSAHCD---YRGTPEYN 568 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMN-------------- 328 L+ RA + L+++G++ R++ + G+ + Sbjct: 569 KTLAQHRANAVVHYLIEAGIAPQRLTPM-GYGKEKPKTIRKKLTERYKWLKEGDVLTEDF 627 Query: 329 -------------SANRRIDILVED 340 NRR + +V+ Sbjct: 628 ITKLDKDKQEICNQLNRRTEFVVQR 652 >gi|107101995|ref|ZP_01365913.1| hypothetical protein PaerPA_01003042 [Pseudomonas aeruginosa PACS2] Length = 461 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 18/149 (12%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 +A+KI + + + ++ F + S++ + ++ +Q+ Sbjct: 325 VAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFR-------FQEGSALLDNKALLDVQR 377 Query: 255 IGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + L + E + G D P + R LS RA + + L + GVS + Sbjct: 378 LLDYLRQNRKLQERTVLVGFGD--PKSDAERSVL-LSRLRAMAVRRELARGGVS---FRE 431 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338 I+GF ++D NRR+++ V Sbjct: 432 IAGFGDELPVASNDQELGRQKNRRVEVWV 460 >gi|210135285|ref|YP_002301724.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori P12] gi|210133253|gb|ACJ08244.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori P12] Length = 179 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD L +I + + + + G+TD + N L + R S Sbjct: 78 FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L+ GV +D I IS F + K NRR+D+ + Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177 >gi|146276382|ref|YP_001166541.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145554623|gb|ABP69236.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 730 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 88/281 (31%), Gaps = 17/281 (6%) Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 A+ N + + + + +++ S D + ++ + + Sbjct: 451 AVGAMLNNRDEVVSNSGDRVVVQRSDGTYSVLKDDDTLLRRPGSEVVTQSFDDGSTRAVV 510 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + I + + + ++ RD + + + +E+ P S + Sbjct: 511 TRADGTQIVTIRDGAGRVLRRTAIDRDGREVRLIDDLAPVERVDVSRLPEPAPGFSFVET 570 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + ++ + A D R ++ + F S+ Sbjct: 571 TNGRELRQALEQA-------RSRTLDRTYSLRQIREYREVRALAPAIDVDQITFATGSAA 623 Query: 244 PLPETIVVLQKIGEVLAHST-----EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 P L +G+ +A EV I GHTDA N LS RA S Sbjct: 624 IDPGQAERLAVLGQTIADMVAERPGEVFLIEGHTDAV---GDEASNLALSDRRAESVALA 680 Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 L + V + + + G+ L+I +D NRR+ + + Sbjct: 681 LSEYFDVPPENMV-VQGYGEGDLRIDTDGPEQRNRRVAVRL 720 >gi|108563489|ref|YP_627805.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori HPAG1] gi|107837262|gb|ABF85131.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori HPAG1] Length = 179 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD L +I + + + + G+TD + N L + R S Sbjct: 78 FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L+ GV +D I IS F + K NRR+D+ + Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177 >gi|3282021|emb|CAA07454.1| outer membrane protein [Haemophilus sp.] Length = 360 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 5/120 (4%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 ++ V+ +G ++ + + F + P+ L I +A Sbjct: 213 INAGVSYRFGQGAAPVVAAPEVVSKTFNLNSDVNFAFGKANLKPQAQAALDGIYGEIAQV 272 Query: 263 TE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 +++ G+TD N +LS RA + + GVS D IS +G+ Sbjct: 273 NSAKVAVAGYTDRI---GSDAFNVKLSQQRAETVANYFVAKGVSADAISA-TGYGKANPV 328 >gi|294140499|ref|YP_003556477.1| OmpA family protein [Shewanella violacea DSS12] gi|293326968|dbj|BAJ01699.1| OmpA family protein [Shewanella violacea DSS12] Length = 197 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 5/107 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD SS+ E + L K+ ++ + I+GHTD ++ N LS+ RA + Sbjct: 94 FDFDSSLLKDEDKMELDKLIALVNSLDGKLVIKGHTD---YQGSNAYNENLSMRRARTIQ 150 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 L + + F + I S N+ NRR ++ ++ Sbjct: 151 DYLEGQLTQGEYEYSVEHFGELQPIIESHTLQANALNRRAMVIFTEK 197 >gi|296122828|ref|YP_003630606.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776] gi|296015168|gb|ADG68407.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776] Length = 296 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 27 PNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDE 86 G+WK+ YADF+T +MAFFLVMW++ + + A+ YF P + Sbjct: 3 GGGGGAWKVAYADFVTAMMAFFLVMWLVGQSKEVK-TAVAHYFQPPPGAAAAELDPDVEP 61 Query: 87 QNPPERSSQN 96 P R+ Sbjct: 62 SLFPPRAELK 71 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 6/110 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA--RDNWRLSLDR 291 +F + + I L+ + L I IRGH + D W+LS R Sbjct: 85 MVLFAEKAYALDESAINQLEALLPDLLGKPNKIEIRGHASRRERADTQTKEDPWQLSWMR 144 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---SDPMNSANRRIDILV 338 + + L+ GV R+ ++S A + N R+++ + Sbjct: 145 SQAVKDFLVSKGVELGRL-RLSQDGAEEPYSAKKLDAEHQAQNARVEVFL 193 >gi|296389028|ref|ZP_06878503.1| putative ABC-type periplasmic phosphate-binding protein [Pseudomonas aeruginosa PAb1] Length = 461 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 18/149 (12%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 +A+KI + + + ++ F + S++ + ++ +Q+ Sbjct: 325 VAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFR-------FQEGSALLDNKALLDVQR 377 Query: 255 IGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + L + E + G D P + R LS RA + + L + GVS + Sbjct: 378 LLDYLRQNQKLQERTVLVGFGD--PKSDAERSVL-LSRLRAMAVRRELARGGVS---FRE 431 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338 I+GF ++D NRR+++ V Sbjct: 432 IAGFGDELPVASNDQELGRQKNRRVEVWV 460 >gi|313107451|ref|ZP_07793639.1| putative ABC-type periplasmic phosphate-binding protein [Pseudomonas aeruginosa 39016] gi|310880141|gb|EFQ38735.1| putative ABC-type periplasmic phosphate-binding protein [Pseudomonas aeruginosa 39016] Length = 461 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 18/149 (12%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 +A+KI + + + ++ F + S++ + ++ +Q+ Sbjct: 325 VAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFR-------FQEGSALLDNKALLDVQR 377 Query: 255 IGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + L + E + G D P + R LS RA + + L + GVS + Sbjct: 378 LLDYLRQNRKLQERTVLVGFGD--PKSDAERSVL-LSRLRAMAVRRELARGGVS---FRE 431 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338 I+GF ++D NRR+++ V Sbjct: 432 IAGFGDELPVASNDQELGRQKNRRVEVWV 460 >gi|218676771|ref|YP_002395590.1| hypothetical protein VS_II1010 [Vibrio splendidus LGP32] gi|218325039|emb|CAV26876.1| Conserved hypothetical protein [Vibrio splendidus LGP32] Length = 751 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 14/175 (8%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + + + ++ K L K + + L + T + Sbjct: 535 ATVQQPGMKSLASIGDKALLNAETKALEQLKNLLPNLGDSDELSLNTEVKKGQHIFELRS 594 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSLD 290 T FD+ S+ + L ++G +L+ I +I+GHT + N LS + Sbjct: 595 TTFAFDR-SNSDNRKARDSLIELGGILSQIHRPIPITIKGHTCSR---GSIEYNQTLSEE 650 Query: 291 RAYSAYQVLMKSGVSEDR-----ISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA + + G++ ++ + G + +D NRR+D+L+ Sbjct: 651 RAIYIRE-CILEGITSNQAAWKTCIRTIGLGERDPLVPNDSEDQRRRNRRVDLLL 704 >gi|90407927|ref|ZP_01216101.1| hypothetical protein PCNPT3_06126 [Psychromonas sp. CNPT3] gi|90310941|gb|EAS39052.1| hypothetical protein PCNPT3_06126 [Psychromonas sp. CNPT3] Length = 304 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 7/100 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ S + L LA I I GHTD + A N L+ RA + Sbjct: 189 FEFDKSQLAEKDKKTLDAFINKLAGLNGRILIAGHTD---IQGAADYNQALATFRARAVE 245 Query: 297 QVLMKSGVSEDR-ISKISGFAHHRLKI--ASDPMNSANRR 333 + L ++ + + I +++ F + + N++NRR Sbjct: 246 KYL-RNKLDASQFIWEVTSFGESKPIDVKHNALANASNRR 284 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 26/90 (28%), Gaps = 3/90 (3%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + + I+I GHTD + + N LS RA + Sbjct: 60 FKFDKYDLQASDQASIDLFIREIKDLKGRIAIVGHTD---VQGSLKYNVHLSAQRAQTIK 116 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP 326 L K ++ +I + + Sbjct: 117 DYLSKQLEVKNYDWEIKYYGETKPLSTQKT 146 >gi|332673924|gb|AEE70741.1| peptidoglycan associated lipoprotein [Helicobacter pylori 83] Length = 179 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD L +I + + + + G+TD + N L + R S Sbjct: 78 FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L+ GV +D I IS F + K NRR+D+ + Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177 >gi|261839857|gb|ACX99622.1| hypothetical protein HPKB_1056 [Helicobacter pylori 52] Length = 179 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 67 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K A NRR+D+ + Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 177 >gi|291437526|ref|ZP_06576916.1| secreted protein [Streptomyces ghanaensis ATCC 14672] gi|291340421|gb|EFE67377.1| secreted protein [Streptomyces ghanaensis ATCC 14672] Length = 218 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 19/194 (9%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + T +++ + T+ S E + P L + K L D+ + + Sbjct: 33 ATTAYADESPSVPPGTEATASAPVELDPNDPDLKLPDGATLAEPKVL-DIKQVVEDQSGD 91 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTE 264 ++ V F + +F K S+ + + I E + + Sbjct: 92 ERREDTNSDVKFAL------------QAEVLFGKDSAKLGAQAKARIATIAEEIKTQNAT 139 Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I + G TD + LS RA + + VL + D ++ G+ + Sbjct: 140 RIRVFGFTDNL---GSSAHGDVLSRQRANAVHGVLEQELNDSDVTYEVRGYGEQYPIADN 196 Query: 325 DPMNSA--NRRIDI 336 NRR++I Sbjct: 197 STEAGRKKNRRVEI 210 >gi|86130146|ref|ZP_01048746.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85818821|gb|EAQ39980.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 431 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 27/221 (12%), Positives = 67/221 (30%), Gaps = 7/221 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 K + + ++ Q + +++ + + Sbjct: 215 GKAEKHADWYSSNNVAQEQIEDLQNRLAKVETDLIDTDQDGVADYLDREPNTVSGVAVNT 274 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 K + + +L + + + +D + I I D F Sbjct: 275 KGVAVDQNKNGVPDELESTLDNRYAK-KSDIPTSTPAIASGDDVIKKLIEDGYVNVYFQF 333 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 +S+ P ++ + + + + + + G+ D A N RLS RA + Sbjct: 334 NSTKPETYSLESINYLIKYMTENAGASAQLVGYADEI---GNASTNQRLSERRAQKVKDI 390 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASD-PMNSANRRIDILV 338 ++ +G+S R++ +G + P RR+ + Sbjct: 391 MVAAGISASRLTA-TGNGEDASVDKNSAPARQLVRRVTFKL 430 >gi|325134964|gb|EGC57596.1| ompA family protein [Neisseria meningitidis M13399] gi|325136954|gb|EGC59551.1| ompA family protein [Neisseria meningitidis M0579] gi|325145176|gb|EGC67458.1| ompA family protein [Neisseria meningitidis M01-240013] Length = 242 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F E L+ + + L + + + + GHTD F + N LS RAY Sbjct: 104 LFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTD---FMGSDKYNQALSERRAYV 160 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 L+ +GV RIS + G + Sbjct: 161 VANNLVSNGVPVSRISAV-GLGESQ 184 >gi|254240978|ref|ZP_04934300.1| hypothetical protein PA2G_01659 [Pseudomonas aeruginosa 2192] gi|126194356|gb|EAZ58419.1| hypothetical protein PA2G_01659 [Pseudomonas aeruginosa 2192] Length = 464 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 18/149 (12%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 +A+KI + + + ++ F + S++ + ++ +Q+ Sbjct: 328 VAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFR-------FQEGSALLDNKALLDVQR 380 Query: 255 IGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + L + E + G D P + R LS RA + + L + GVS + Sbjct: 381 LLDYLRQNRKLQERTVLVGFGD--PKSDAERSVL-LSRLRAMAVRRELARGGVS---FRE 434 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338 I+GF ++D NRR+++ V Sbjct: 435 IAGFGDELPVASNDQELGRQKNRRVEVWV 463 >gi|329904214|ref|ZP_08273697.1| peptidoglycan-associated lipoprotein [Oxalobacteraceae bacterium IMCC9480] gi|327548110|gb|EGF32831.1| peptidoglycan-associated lipoprotein [Oxalobacteraceae bacterium IMCC9480] Length = 174 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 + + FD S + E VL+ L+ + I +G+TD N L Sbjct: 69 KRSVYFDYDSYVVKAEFKSVLEAHARYLSANKSRKIIIQGNTDDR---GGREYNLALGQK 125 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 R+ + Q + GV+++++ +S + K + NRR DI+ Sbjct: 126 RSEAVRQAMSLMGVADNQLEAVS-LGKEKPKATGSDEAAYAENRRADIV 173 >gi|325202801|gb|ADY98255.1| ompA family protein [Neisseria meningitidis M01-240149] Length = 242 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F E L+ + + L + + + + GHTD F + N LS RAY Sbjct: 104 LFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTD---FMGSDKYNQALSERRAYV 160 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 L+ +GV RIS + G + Sbjct: 161 VANNLVSNGVPVSRISAV-GLGESQ 184 >gi|254805583|ref|YP_003083804.1| class 4 outer membrane protein [Neisseria meningitidis alpha14] gi|254669125|emb|CBA07752.1| class 4 outer membrane protein [Neisseria meningitidis alpha14] Length = 242 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F E L+ + + L + + + + GHTD F + N LS RAY Sbjct: 104 LFGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTD---FMGSDKYNQALSERRAYV 160 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 L+ +GV RIS + G + Sbjct: 161 VANNLVSNGVPVSRISAV-GLGESQ 184 >gi|15676296|ref|NP_273431.1| outer membrane protein class 4 [Neisseria meningitidis MC58] gi|304386635|ref|ZP_07368919.1| outer membrane protein class 4 [Neisseria meningitidis ATCC 13091] gi|60416397|sp|P0A0V3|OMP4_NEIMB RecName: Full=Outer membrane protein class 4; Flags: Precursor gi|7225603|gb|AAF40822.1| outer membrane protein class 4 [Neisseria meningitidis MC58] gi|304339285|gb|EFM05361.1| outer membrane protein class 4 [Neisseria meningitidis ATCC 13091] gi|316984886|gb|EFV63842.1| ompA family protein [Neisseria meningitidis H44/76] gi|325128875|gb|EGC51731.1| ompA family protein [Neisseria meningitidis N1568] gi|325141028|gb|EGC63534.1| ompA family protein [Neisseria meningitidis CU385] gi|325199575|gb|ADY95030.1| ompA family protein [Neisseria meningitidis H44/76] gi|325203490|gb|ADY98943.1| ompA family protein [Neisseria meningitidis M01-240355] Length = 242 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F E L+ + + L + + + + GHTD F + N LS RAY Sbjct: 104 LFGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTD---FMGSDKYNQALSERRAYV 160 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 L+ +GV RIS + G + Sbjct: 161 VANNLVSNGVPVSRISAV-GLGESQ 184 >gi|311278468|ref|YP_003940699.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1] gi|308747663|gb|ADO47415.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1] Length = 160 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 6/112 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + ++ + + LA + + GHTD N LSL R Sbjct: 52 DKILFSTNDYQLNTQSRQQIAAMASRLAATGITHARMDGHTDNY---GEDSYNEALSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 A + G ++ NRR+ I++ + Sbjct: 109 ADRVADAWAEGARIPRGNLTTQGLGKKYPVASNATAQGRSENRRVTIVISEP 160 >gi|289673872|ref|ZP_06494762.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5] Length = 447 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 11/173 (6%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 P + ++ + Q + + + + + Sbjct: 281 PTSTPQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 340 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288 F + S+ + L+++ + L + +++ G DA A LS Sbjct: 341 SVNFRFAQGSARLDNKAQQDLKRVADYLKTSGKLDQHVTLVGFGDAKSDPERAAL---LS 397 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 RA + + L+KSGV+ I G + D NRR+++ V+ Sbjct: 398 RLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447 >gi|148554155|ref|YP_001261737.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1] gi|148499345|gb|ABQ67599.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1] Length = 196 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + ++ PE+ L + + ++ + + G+TD A N RLS RA Sbjct: 95 FLEGTTELTPESQPGLAFLIKEVSERPGAEVQVTGYTDTL---GEADANDRLSQQRAEEV 151 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 VL K G+ +S + G L++A+ ANRR+ + + Sbjct: 152 LGVLAKQGIDPTLMSAV-GRGERNLRVATPDGVSEPANRRVVVTIR 196 >gi|91776690|ref|YP_546446.1| OmpA/MotB [Methylobacillus flagellatus KT] gi|91710677|gb|ABE50605.1| OmpA/MotB [Methylobacillus flagellatus KT] Length = 180 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + FD S E +++ + L ++ + ++G+TD N L Sbjct: 71 SKRNVYFDFDSDAIKAEFRPLIEAHAQYLNSNSGAKVFLQGNTDER---GTREYNLSLGQ 127 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 RA + +VL GV + +I +S F + + D +RR++ + Sbjct: 128 RRAVAVKKVLNLLGVQDTQIETVS-FGKEKANTSCVDDTCWQQDRRVEFV 176 >gi|15597744|ref|NP_251238.1| hypothetical protein PA2548 [Pseudomonas aeruginosa PAO1] gi|9948606|gb|AAG05936.1|AE004682_8 hypothetical protein PA2548 [Pseudomonas aeruginosa PAO1] Length = 464 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 18/149 (12%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 +A+KI + + + ++ F + S++ + ++ +Q+ Sbjct: 328 VAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFR-------FQEGSALLDNKALLDVQR 380 Query: 255 IGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + L + E + G D P + R LS RA + + L + GVS + Sbjct: 381 LLDYLRQNRKLQERTVLVGFGD--PKSDAERSVL-LSRLRAMAVRRELARGGVS---FRE 434 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338 I+GF ++D NRR+++ V Sbjct: 435 IAGFGDELPVASNDQELGRQKNRRVEVWV 463 >gi|330901158|gb|EGH32577.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT] Length = 451 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 11/173 (6%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 P + ++ + Q + + + + + Sbjct: 285 PTSTPQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 344 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288 F + S+ + L+++ + L + +++ G DA A LS Sbjct: 345 SVNFRFAQGSARLDNKAQQDLKRVADYLKTSGKLNQHVTLVGFGDAKSDPERAAL---LS 401 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 RA + + L+KSGV+ I G + D NRR+++ V+ Sbjct: 402 RLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 451 >gi|261838454|gb|ACX98220.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori 51] gi|315587014|gb|ADU41395.1| peptidoglycan associated lipoprotein [Helicobacter pylori 35A] gi|317178572|dbj|BAJ56360.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori F30] gi|317182379|dbj|BAJ60163.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori F57] Length = 179 Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD L +I + + + + G+TD + N L + R S Sbjct: 78 FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L+ GV +D I IS F + K NRR+D+ + Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177 >gi|317406287|gb|EFV86528.1| OmpA/MotB domain-containing protein [Achromobacter xylosoxidans C54] Length = 240 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 65/216 (30%), Gaps = 13/216 (6%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ--------SEHCKNSLTRDSEKGKD 156 + +V + G L+ QQ + + + Sbjct: 23 TVVPANVIPQPGQVVASGAVPDEATKADVLARLQQVYGVGNVIDQIEVGGVVAPPNWSEH 82 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + K + + ++ + Q +A +++L+ V Sbjct: 83 VGKLIGQPLKQINRGQLEVDGTQIRLLGEVQNEASRQQIASTFATSLNPTYKIVNGLRVA 142 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDAS 275 G+L ++ R F+ S+ +L ++ +V+ ++ + I GHTD+ Sbjct: 143 AGKDEQGLLDKVLTNR-VVEFETGSATLTARGRELLDQVADVIPKLHSDKVQIIGHTDS- 200 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 N LS RA + L+ G+ R Sbjct: 201 --SGSRSTNLALSQARADAVRAYLVDKGLPPGRFET 234 >gi|317177876|dbj|BAJ55665.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori F16] Length = 179 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD L +I + + + + G+TD + N L + R S Sbjct: 78 FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L+ GV +D I IS F + K NRR+D+ + Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 177 >gi|291613389|ref|YP_003523546.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1] gi|291583501|gb|ADE11159.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1] Length = 163 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + E + V+QK E L + +++G+ D + N L +RA + Sbjct: 60 FDFNKYTVKSEYMNVIQKEAEFLKTHKNDVVTLQGNADER---GSEKYNLGLGENRADAV 116 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 +VL K GV D+I +S + ++ NRR+D L Sbjct: 117 AKVLEKDGVPADQIKMVS-LGKDKPRLTCHKEKCWKENRRVDFL 159 >gi|307249694|ref|ZP_07531674.1| hypothetical protein appser4_4980 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858260|gb|EFM90336.1| hypothetical protein appser4_4980 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 164 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 20/126 (15%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + V+ + L S E + + G+TD + N LS R Sbjct: 22 GDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRL---GSEKYNLDLSQRR 78 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSA-------NRRIDI-----L 337 A L++ GV+ + I+ + G+ + A D P NRR+++ + Sbjct: 79 ANMVKARLVQQGVTAN-INAV-GYGKAQQVKACDGIPHGQELKDCLRPNRRVEVTANGGV 136 Query: 338 VEDRQG 343 ++ +G Sbjct: 137 LKQNEG 142 >gi|325981317|ref|YP_004293719.1| peptidoglycan-associated lipoprotein [Nitrosomonas sp. AL212] gi|325530836|gb|ADZ25557.1| peptidoglycan-associated lipoprotein [Nitrosomonas sp. AL212] Length = 174 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 + + +D S E ++ L + I +G+TD N L Sbjct: 65 SQRSVFYDFDSYTVKSEYRELVLSHARFLRDNPAASVILQGNTDDR---GSREYNLALGQ 121 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 RA S +++ SG + +I +S + + + S NRR DIL Sbjct: 122 RRADSVKNMMILSGAQDLQIESVS-LGEEKPRALGHGESTWSQNRRTDIL 170 >gi|116050492|ref|YP_790689.1| hypothetical protein PA14_31620 [Pseudomonas aeruginosa UCBPP-PA14] gi|218891473|ref|YP_002440340.1| putative ABC-type periplasmic phosphate-binding protein [Pseudomonas aeruginosa LESB58] gi|254235540|ref|ZP_04928863.1| hypothetical protein PACG_01464 [Pseudomonas aeruginosa C3719] gi|115585713|gb|ABJ11728.1| putative ABC-type periplasmic phosphate-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126167471|gb|EAZ52982.1| hypothetical protein PACG_01464 [Pseudomonas aeruginosa C3719] gi|218771699|emb|CAW27473.1| putative ABC-type periplasmic phosphate-binding protein [Pseudomonas aeruginosa LESB58] Length = 464 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 18/149 (12%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 +A+KI + + + ++ F + S++ + ++ +Q+ Sbjct: 328 VAQKIQAVQIAPRPQMPAEYRKLAEQARRLTVNFR-------FQEGSALLDNKALLDVQR 380 Query: 255 IGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + + L + E + G D P + R LS RA + + L + GVS + Sbjct: 381 LLDYLRQNRKLQERTVLVGFGD--PKSDAERSVL-LSRLRAMAVRRELARGGVS---FRE 434 Query: 312 ISGFAHHRLKIASDPM--NSANRRIDILV 338 I+GF ++D NRR+++ V Sbjct: 435 IAGFGDELPVASNDQELGRQKNRRVEVWV 463 >gi|258591277|emb|CBE67574.1| OmpA/MotB domain protein precursor [NC10 bacterium 'Dutch sediment'] Length = 214 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 7/100 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S ++ ++ + E + ++I GH+D + N L RA +A Sbjct: 111 FDFDQSAIRDDSKKLMDENVEWFRQHSAARVTIEGHSDER---GSSEYNLALGERRARAA 167 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333 L+ +G++ +RI IS F R ++ + NRR Sbjct: 168 RDYLVAAGIAANRIGTIS-FGKERPFVSGHDESTWRWNRR 206 >gi|261856832|ref|YP_003264115.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] gi|261837301|gb|ACX97068.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2] Length = 373 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 18/117 (15%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRA 292 +FD + S+ P L ++ L + + I + GHTD N +LS RA Sbjct: 255 DSLFDFNKSVVKPAGKRALDQLARDLNGTDYDQIMVIGHTDRI---GSHAYNLKLSTRRA 311 Query: 293 YSAYQVLMKSG-VSEDRISK--ISGFAH--HRL---KIASDPMN-----SANRRIDI 336 + L+ SG + +IS + G A + + +RR+++ Sbjct: 312 EAVKDYLISSGQIPAHKISAKGVDG-ADPVTKPGDCVGSKATPALIACLQPDRRVEV 367 >gi|150003007|ref|YP_001297751.1| major outer membrane protein OmpA [Bacteroides vulgatus ATCC 8482] gi|319642207|ref|ZP_07996867.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_40A] gi|149931431|gb|ABR38129.1| major outer membrane protein OmpA [Bacteroides vulgatus ATCC 8482] gi|317386193|gb|EFV67112.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_40A] Length = 399 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 73/209 (34%), Gaps = 9/209 (4%) Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 ++ +E+ + T + + + P + L + Sbjct: 196 WDLNLELYGMGTENKFDGKTTSKGPDFMAGATVGITYKFPQRGFKPAPDVDAIMALTSSQ 255 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + L A + T + + I + F S++ + Sbjct: 256 MDAINTALAQQIEQNRQLKAQLANQPTEVVTEQVTV-NQIAPAPQSVFFQIGSAVLPTNS 314 Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 V LQ+I +++ + + + G+ D+ A N +LS DRA + L+K GV+++ Sbjct: 315 TVNLQQIADLVKDNPGLKLKVTGYADS--DTGSAAWNKQLSEDRANNVANELVKLGVNKN 372 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDI 336 + ISG + + + NRR+ I Sbjct: 373 NLI-ISGMGG----VNTLTPPAFNRRVII 396 >gi|327189144|gb|EGE56328.1| hypothetical protein RHECNPAF_7150015 [Rhizobium etli CNPAF512] Length = 429 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 10/173 (5%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 LPP + + ++ + ++ + L + + + V I++ I R Sbjct: 264 ATLPPNGVVRSARIALPPKVVMSSDRLRNFLEPEIREGL---VTVSEDPQQIVVII---R 317 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDR 291 + MFD +S + +L +IG L + + + GHTDA P ++ N LSL R Sbjct: 318 ASGMFDSASPEVKKMFLPLLLRIGRSLNGESGSVLLTGHTDAIPVQSLAFPSNDSLSLAR 377 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 A +A +++ R+ + G ++ + NRRI I++ Q Sbjct: 378 ASAAAEIIKSMMNDPGRV-REEGRGSGEPVASNHTPEGRARNRRIQIIITKTQ 429 >gi|237707997|ref|ZP_04538478.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA] gi|265754217|ref|ZP_06089406.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA] gi|229457983|gb|EEO63704.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA] gi|263234926|gb|EEZ20481.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA] Length = 395 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 73/209 (34%), Gaps = 9/209 (4%) Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 ++ +E+ + T + + + P + L + Sbjct: 192 WDLNLELYGMGTENKFDGKTTSKGPDFMAGATVGITYKFPQRGFKPAPDVDAIMALTSSQ 251 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + L A + T + + I + F S++ + Sbjct: 252 MDAINTALAQQIEQNRQLKAQLANQPTEVVTEQVTV-NQIAPAPQSVFFQIGSAVLPTNS 310 Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 V LQ+I +++ + + + G+ D+ A N +LS DRA + L+K GV+++ Sbjct: 311 TVNLQQIADLVKDNPGLKLKVTGYADS--DTGSAAWNKQLSEDRANNVANELVKLGVNKN 368 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDI 336 + ISG + + + NRR+ I Sbjct: 369 NLI-ISGMGG----VNTLTPPAFNRRVII 392 >gi|154245935|ref|YP_001416893.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus Py2] gi|154160020|gb|ABS67236.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2] Length = 220 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 66/185 (35%), Gaps = 10/185 (5%) Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV--KGVLFETTRT 222 ++ + + + + + D+ + + L GL ++ Sbjct: 35 PALVGVQPAAAQVFTPNAEIVQGLQTSVDDVPQVSAEALRGLAQAHMKYTGPPESRPPLA 94 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRN 279 L + +FD +S++ PE+ L I + + + + G+TDA+ Sbjct: 95 AQLDQLAQINVEIVFDLNSAMIKPESYRTLGSIADAMHNPVLLGYKFLVVGNTDAT---G 151 Query: 280 IARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 N +LS +R+ + + L V R+ + G L+ P + NRR+ I Sbjct: 152 TRELNMKLSQERSDAVVEALSTTFRVDPRRLQSV-GLGEEALQDPKHPDAAINRRVQIYN 210 Query: 339 EDRQG 343 R G Sbjct: 211 VGRAG 215 >gi|153877197|ref|ZP_02004126.1| Outer membrane protein A [Beggiatoa sp. PS] gi|152066338|gb|EDN65873.1| Outer membrane protein A [Beggiatoa sp. PS] Length = 148 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 12/117 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRL 287 + N F+ + + +L + + I I GH D+SP +L Sbjct: 39 EDNRITFEPGKATLTDQVKSILDTLAAKICLEIAHINAIVITGHADSSP---TDNYKQKL 95 Query: 288 SLDRAYSAYQVLMKS--GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 SL RA + L +++D++ G A A + NRR++I V + Sbjct: 96 SLARAVAVADYLKSRCPALTDDKLIT-KGLADQYPLSADS---AKNRRVEIRVMKKN 148 >gi|118578838|ref|YP_900088.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM 2379] gi|118501548|gb|ABK98030.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379] Length = 687 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 7/117 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285 ++ ++ +FD + ++ KI + +SI GHTD N Sbjct: 569 NVQEKYALILFDFNKDTVSGLNQEIVNKIVTRFKSLPQASMSIVGHTDNI---GSESYNL 625 Query: 286 RLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 +LS RA + Y++L G + SG + NR + I +E Sbjct: 626 KLSQRRAAAVYKLLTAAYGEPVGERIRFSGVGQGSPLFDNQTPEGRAFNRTVTITLE 682 Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 13/119 (10%) Query: 226 ISIIDQRNTPMFDKSSS-IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARD 283 + + T FD+ + + +L IG+ LA + I++ G D + Sbjct: 337 VRFHEASATEGFDEQTFRDTTEKYHQILNIIGKRLADTPGATITLVGCNDN---SGAEKG 393 Query: 284 NWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDP----MNSANRRIDIL 337 LS RA + L ++ +RI +I + K+ S + NRR++I+ Sbjct: 394 KTGLSTRRAEAVKTYLGTIWNIAPERI-RIEAR--NLPKMPSSSSSQEGQAENRRVEIV 449 >gi|315266048|gb|ADT92901.1| OmpA/MotB domain protein [Shewanella baltica OS678] Length = 365 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 9/116 (7%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDN 284 I + + +F+ SS + LQ I L + I RG++D+ + N Sbjct: 244 IELEEVTFPVLFNFDSSEL--FFVDSLQIIINRLIQFPQATVILRGYSDSQ---GSSEYN 298 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 LS R S Q L + GV +I + NRR+ +L+ Sbjct: 299 LALSKRRTDSITQYLTEHGVKPQQIIA-EHYGEQYPVTDKISEQHKHLNRRVQVLL 353 >gi|262198303|ref|YP_003269512.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262081650|gb|ACY17619.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 170 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 8/108 (7%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNW 285 I+ + F S+ P L+ + L + E + I GH D A N Sbjct: 57 EQIEPESRVFFALDSAELTPLAQSELEDVAAWLVDNEERELVIEGHADPQ---GAADYNQ 113 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 LS RA + YQ L+ G+ +R+ + F A + S NRR Sbjct: 114 ELSEKRAIAVYQFLLDQGIPAERMER-RAFGESE---ADEAPYSINRR 157 >gi|160873823|ref|YP_001553139.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195] gi|160859345|gb|ABX47879.1| OmpA/MotB domain protein [Shewanella baltica OS195] Length = 369 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 9/116 (7%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDN 284 I + + +F+ SS + LQ I L + I RG++D+ + N Sbjct: 248 IELEEVTFPVLFNFDSSEL--FFVDSLQIIINRLIQFPQATVILRGYSDSQ---GSSEYN 302 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 LS R S Q L + GV +I + NRR+ +L+ Sbjct: 303 LALSKRRTDSITQYLTEHGVKPQQIIA-EHYGEQYPVTDKISEQHKHLNRRVQVLL 357 >gi|73920657|gb|AAZ94164.1| OpcL [Burkholderia sp. BC92] Length = 139 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 7/100 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E ++Q+ + L + + I+G+TD + N L RA + Sbjct: 42 FDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 98 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333 + + GV++ ++ +S + + + + NRR Sbjct: 99 RRAMALLGVNDSQMEAVS-LGKEKPQATGHDEASWAQNRR 137 >gi|330982164|gb|EGH80267.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 447 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 11/173 (6%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 P + ++ + Q + + + + + Sbjct: 281 PTSTPQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 340 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288 F + S+ + L+++ + L + +++ G DA A LS Sbjct: 341 SVNFRFAQGSARLDNKAQQDLKRVADYLKTSGKLDQHVTLVGFGDAKSDPERAAL---LS 397 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 RA + + L+KSGV+ I G + D NRR+++ V+ Sbjct: 398 RLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447 >gi|209809438|ref|YP_002264976.1| outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] gi|208011000|emb|CAQ81413.1| outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] Length = 307 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 5/99 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ S L + + I+I GHTD ++ N LS RA S Sbjct: 62 FEFDKSELKETDYASLNQFVNSIKRFKGRIAIVGHTD---YQGSVSYNEELSRQRAESIK 118 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333 L + V + ++ + R I N+ANRR Sbjct: 119 AYLSEKLVVSNYEWEVKYYGEKRPFIKGRSLEANAANRR 157 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 49/146 (33%), Gaps = 12/146 (8%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 ++ + + L + + +++ F V Sbjct: 150 EANAANRRAYLVFEQTIDKELNPACLPPEPKRKVYVTMASH-----FAFDKDELQNTDKV 204 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR-I 309 L ++ L T I I GHTD ++ N +L+ +R+ + L K+ V + I Sbjct: 205 ELDELALKLTGLTGRILIAGHTD---YQGSQSYNEQLAKERSMAVQNYL-KTKVDPSQFI 260 Query: 310 SKISGFAHHRLKIASDP--MNSANRR 333 +I F I N+ANRR Sbjct: 261 WEIKSFGEDSPIIEERSLKANAANRR 286 >gi|52425200|ref|YP_088337.1| SmpA protein [Mannheimia succiniciproducens MBEL55E] gi|52307252|gb|AAU37752.1| SmpA protein [Mannheimia succiniciproducens MBEL55E] Length = 272 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 37/113 (32%), Gaps = 15/113 (13%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292 +FD V+ + E L S + + + G TD N LS RA Sbjct: 139 DFLFDFDKDSLTERGKKVVDSVAEQLKASKAKTVKVAGFTDRL---GSEAYNLELSQRRA 195 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMNSA--------NRRIDI 336 + L+ V D I I G+ + + NRR++I Sbjct: 196 NQVKEWLIARDVKAD-IDAI-GYGSAQQIKPCTGLKAGKALRDCLRPNRRVEI 246 >gi|296101384|ref|YP_003611530.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055843|gb|ADF60581.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 313 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 96/301 (31%), Gaps = 21/301 (6%) Query: 50 VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 ++ A + K + + + G Q + I + + Sbjct: 23 ILISSTAYSAERVKHVID-----IPEDVKTTSGKTAPQPYRPVADVTPELAQIVVYYPEG 77 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 SV I +++ Q L L + + ++ L + Sbjct: 78 SVPATIY-VDRELQSVLLPGQFTVLCAAPGAHAVESWFNDHPAYQGKQNPLQQLNAESAQ 136 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + P + A++ + R + L K+ + + + + ++ I Sbjct: 137 TYFIQVNPGTSGNTAALEERSRAEALLSKMHKQTK--IINRASQVKTCDYINNSGVVLIQ 194 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRL 287 +Q +++ E+ L ++ + + I I G+TDA N RL Sbjct: 195 EQVLFRFAASNAAGIFAESRNKLDEVVKFTKKANNVSEIQIVGYTDAI---GSREANQRL 251 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-----N---RRIDILVE 339 S RA + +L++ G+ + I+ +G + S N RR++ILV+ Sbjct: 252 SEARADTVRSLLIEKGIKPELINNTTGKGIAQSAEGCGTSASQQAAGCNVNSRRVEILVK 311 Query: 340 D 340 Sbjct: 312 S 312 >gi|223041685|ref|ZP_03611882.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor 202] gi|223017549|gb|EEF15963.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor 202] Length = 344 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 18/124 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +F S P L + I + G+ D N +LS Sbjct: 221 SDVLFAFGKSXLKPAAAQALDAANNEINALGLANPAIQVNGYXDRI---GKZXXNLKLSQ 277 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----------SANRRIDILV 338 RA + L+ G + ++ + G+ + + +RR+++ V Sbjct: 278 RRAETVANYLVSKGQNXANVTAV-GYGXANPVTGNTCDAVKGRKALIACLAPDRRVEVQV 336 Query: 339 EDRQ 342 + + Sbjct: 337 QGSK 340 >gi|77459872|ref|YP_349379.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1] gi|77383875|gb|ABA75388.1| phosphate ABC transporter substrate-binding protein, PhoT family [Pseudomonas fluorescens Pf0-1] Length = 444 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 91/300 (30%), Gaps = 20/300 (6%) Query: 53 IINATDDDTKKAI----EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 +N + + I + + G T D+Q+ + + + + ++ Sbjct: 150 SLNQLNTEQLARIFSGEAKTWEDVGGKGGTIHLYARDDQSGTYDTFKELVLSRRGKSLSN 209 Query: 109 NSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK--STDLEKS 166 + + + F + + S+ L +T+ Sbjct: 210 AAKRFESSEQLSDAVSADPQAIGFIGLPYVRQAKAVAIVDGQSQAMLPLASLIATEDYPL 269 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS---TLSGLVADNIVKGVLFETTRTG 223 + Y P + A+ + + +++ + A + L Sbjct: 270 SRRLFFYLPPDSNNPWARALVEFAQSRQGQAIVAANGFIAQTVQAIAVTPNALMPEGYQS 329 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNI 280 + F++ S+ + L ++ + + H + + G DA Sbjct: 330 LSRHAQRLTVNFRFEEGSASLDNKARQDLARVFDYIKHHDKTDRAVTLVGFGDAKDDPAR 389 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 A LS RA + + L+K+GV + ++ GF + D NRR+++ V Sbjct: 390 ADL---LSKLRAMAVRRELVKNGVV---LREVRGFGALMPVATNSGDEGRIKNRRVEVWV 443 >gi|170739243|ref|YP_001767898.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46] gi|168193517|gb|ACA15464.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46] Length = 210 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 8/102 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F +SS + + +G LA I I GHTD + R N RLS RA Sbjct: 99 FAYNSSKIGHGALAQVSALGASLARPELRDSTILIVGHTD---GKGSDRGNQRLSERRAR 155 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 + +++ GV+ + + GF LK A++P +ANRR+ Sbjct: 156 AVKDYIVRHYGVAAGNLIGV-GFGKSHLKEAANPYAAANRRV 196 >gi|194336954|ref|YP_002018748.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309431|gb|ACF44131.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 519 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 11/108 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293 F S + + +I VL+ + G DA + N L+ RA Sbjct: 418 FRADSEVLDTRANRDIGRIVAVLSQPKYKDKRVVLIGFADA---AGSIKHNKELAQKRAE 474 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 L++ GV + ++++G +D NRRI++ V+ Sbjct: 475 VVATALIEEGV---QCAEVTGVGAEAFVAPNDTQENREKNRRIEVWVK 519 >gi|212690547|ref|ZP_03298675.1| hypothetical protein BACDOR_00029 [Bacteroides dorei DSM 17855] gi|254883655|ref|ZP_05256365.1| major outer membrane protein OmpA [Bacteroides sp. 4_3_47FAA] gi|294775642|ref|ZP_06741150.1| OmpA family protein [Bacteroides vulgatus PC510] gi|212666896|gb|EEB27468.1| hypothetical protein BACDOR_00029 [Bacteroides dorei DSM 17855] gi|254836448|gb|EET16757.1| major outer membrane protein OmpA [Bacteroides sp. 4_3_47FAA] gi|294450486|gb|EFG18978.1| OmpA family protein [Bacteroides vulgatus PC510] Length = 401 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 73/209 (34%), Gaps = 9/209 (4%) Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 ++ +E+ + T + + + P + L + Sbjct: 198 WDLNLELYGMGTENKFDGKTTSKGPDFMAGATVGITYKFPQRGFKPAPDVDAIMALTSSQ 257 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + L A + T + + I + F S++ + Sbjct: 258 MDAINTALAQQIEQNRQLKAQLANQPTEVVTEQVTV-NQIAPAPQSVFFQIGSAVLPTNS 316 Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 V LQ+I +++ + + + G+ D+ A N +LS DRA + L+K GV+++ Sbjct: 317 TVNLQQIADLVKDNPGLKLKVTGYADS--DTGSAAWNKQLSEDRANNVANELVKLGVNKN 374 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDI 336 + ISG + + + NRR+ I Sbjct: 375 NLI-ISGMGG----VNTLTPPAFNRRVII 398 >gi|71908538|ref|YP_286125.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71848159|gb|AAZ47655.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 175 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 7/105 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + + FD SS E V + G+ LA+ +++RG+TD N L Sbjct: 66 SKRSIYFDLDSSAIKQEYRSVAEAHGKFLANRPGVKVTVRGNTDER---GSREYNLALGQ 122 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANR 332 RA + Q L GV D+I +S + + ++ + NR Sbjct: 123 RRADATKQALSAYGVVSDQIETVS-YGSEKPAAEGHNEAAWAKNR 166 >gi|261391899|emb|CAX49359.1| outer-membrane protein class 4 [Neisseria meningitidis 8013] gi|325132932|gb|EGC55609.1| ompA family protein [Neisseria meningitidis M6190] gi|325138919|gb|EGC61469.1| ompA family protein [Neisseria meningitidis ES14902] Length = 240 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F E L+ + + L + + + + GHTD F + N LS RAY Sbjct: 102 LFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTD---FMGSDKYNQALSERRAYV 158 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 L+ +GV RIS + G + Sbjct: 159 VANNLVSNGVPVSRISAV-GLGESQ 182 >gi|121635480|ref|YP_975725.1| outer membrane protein class 4 [Neisseria meningitidis FAM18] gi|161870687|ref|YP_001599860.1| outer membrane protein class 4 [Neisseria meningitidis 053442] gi|218768845|ref|YP_002343357.1| outer membrane protein class 4 [Neisseria meningitidis Z2491] gi|60392859|sp|P0A0V2|OMP4_NEIMA RecName: Full=Outer membrane protein class 4; Flags: Precursor gi|120867186|emb|CAM10954.1| outer membrane protein class 4 [Neisseria meningitidis FAM18] gi|121052853|emb|CAM09205.1| outer membrane protein class 4 [Neisseria meningitidis Z2491] gi|161596240|gb|ABX73900.1| outer membrane protein class 4 [Neisseria meningitidis 053442] gi|254670228|emb|CBA05418.1| outer membrane protein class 4 [Neisseria meningitidis alpha153] gi|254672496|emb|CBA05992.1| outer membrane protein class 4 [Neisseria meningitidis alpha275] gi|308388587|gb|ADO30907.1| outer membrane protein class 4 [Neisseria meningitidis alpha710] gi|319411080|emb|CBY91483.1| outer-membrane protein class 4 [Neisseria meningitidis WUE 2594] gi|325142982|gb|EGC65338.1| ompA family protein [Neisseria meningitidis 961-5945] gi|325198932|gb|ADY94388.1| ompA family protein [Neisseria meningitidis G2136] gi|325208795|gb|ADZ04247.1| ompA family protein [Neisseria meningitidis NZ-05/33] Length = 242 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F E L+ + + L + + + + GHTD F + N LS RAY Sbjct: 104 LFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTD---FMGSDKYNQALSERRAYV 160 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 L+ +GV RIS + G + Sbjct: 161 VANNLVSNGVPVSRISAV-GLGESQ 184 >gi|153871121|ref|ZP_02000371.1| lipoprotein [Beggiatoa sp. PS] gi|152072413|gb|EDN69629.1| lipoprotein [Beggiatoa sp. PS] Length = 285 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 73/243 (30%), Gaps = 21/243 (8%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + KK Q+ N+ L+N + + +L+ K K+ Sbjct: 43 PPAQAEDSLKKATQKCPNHAPALNNLANIKEKQGNLSEALRLYKKAIKANSQFAYAYAGI 102 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 L + A +K L K + N ++ + +S Sbjct: 103 GDVLIKQRDYQKAAKFFQKFLTLQGKGNNVQEYKQKLKNAQNNIVVSASEIYQNLSTKRS 162 Query: 232 RNTP-------MFDKSSSIPLPETIVVLQKIGEVLAHST-----EVISIRGHTDASPFRN 279 P F SS Q+I + + I I GHTD Sbjct: 163 IGPPKVVDVPIQFPTGSSEIRGNAKRQCQEIAQAVRDVFKTDKNSKIRIEGHTDNQ---G 219 Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI--ASDPMNS--ANRRI 334 A N LS RA + L+K + +R ++ G+ + + + NRR+ Sbjct: 220 KADYNRGLSAKRAKKIKEQLVKELNLPAERF-EVVGWGEEKPIARCNNGDEHGCFLNRRV 278 Query: 335 DIL 337 ++ Sbjct: 279 TLV 281 >gi|291278017|gb|ADD91483.1| outer mebrane protein A [Riemerella columbina] Length = 326 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 73/251 (29%), Gaps = 21/251 (8%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N AS + +R +D T V+ + ++ Sbjct: 94 KSAVANFWQASATLNFRFGNQDRDKDGVLDKDDLCPDTPGLVEFQGCPDTDGDGVPDKDD 153 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 N ++ ++ C + D+ EN P ++ + + Sbjct: 154 NCPDVAGPAENNGCPWPDSDGDGVLDKDDACVDV---AGPAENNGCPWPDRDNDGVLDKD 210 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + D+ + ++ + F+ + + PE+ Sbjct: 211 DKCPDVPGLVQYNGCPEPSEVTAERAT-------------GALQGIFFNFNKASIRPESD 257 Query: 250 VVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L + +++ + + GHTDA + A N +LS +RA S L GV+ + Sbjct: 258 GKLDQAADIIKSSNGGTFLVTGHTDA---KGNANYNLKLSKERAASVVNALEARGVNASQ 314 Query: 309 ISKISGFAHHR 319 + G Sbjct: 315 LKS-RGVGSAE 324 >gi|300776237|ref|ZP_07086095.1| possible outer membrane protein [Chryseobacterium gleum ATCC 35910] gi|300501747|gb|EFK32887.1| possible outer membrane protein [Chryseobacterium gleum ATCC 35910] Length = 508 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 7/123 (5%) Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP 276 + + F+ + + PE+ L ++ + + GHTD Sbjct: 355 VVKDHKETAVEVEKTLKDIYFNFNKATIRPESNEKLDLAASIIKENGGNYLLTGHTD--- 411 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR---LKIASDPMNSANRR 333 + A N RLS +RA + L G++++ + G ASD A+R+ Sbjct: 412 IKGNAAYNLRLSKERAAAVVGALESRGINKNVLKS-RGVGSAEATIPASASDAERMADRK 470 Query: 334 IDI 336 + + Sbjct: 471 VTV 473 >gi|25298554|pir||E84968 outer membrane protein A precursor [imported] - Buchnera sp. (strain APS) Length = 349 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 40/120 (33%), Gaps = 20/120 (16%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293 F +S+ P + L K+ + + + GH D +LS DRAY Sbjct: 233 FPFNSTELKPSSYDKLNKLDDDIKDMQLKNVSIVLLGHADKI---GSDEYXQKLSEDRAY 289 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN------------SANRRIDILVEDR 341 S L G S D+I + G + + +RR++I V Sbjct: 290 SIKNYLASRGFSRDKI-TVKGMGKLYPL-TNQVCRDVVNKPLLISCLAPDRRVEIEVLSD 347 >gi|157963679|ref|YP_001503713.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC 700345] gi|157848679|gb|ABV89178.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345] Length = 404 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 7/138 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 D + T +++ + T +++ S +QK+ + + Sbjct: 264 QDQCLDTPSTHAVDSRGCTLFAPRVVEMKLTVLYENDSDKIDLSNTDKIQKLADFIEQYD 323 Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I++ GHT A N +LS RA S ++L I K G Sbjct: 324 IKQITVFGHTSAV---GSQAYNQKLSERRAASVAEMLAADFNIATGIIKAVGKGESEPI- 379 Query: 323 ASDPMNSANRRIDILVED 340 + P NRRI++ + + Sbjct: 380 SHIPE--QNRRIEVYLNE 395 >gi|292488104|ref|YP_003530981.1| putative type VI secretion system core protein [Erwinia amylovora CFBP1430] gi|292899316|ref|YP_003538685.1| outer membrane protein [Erwinia amylovora ATCC 49946] gi|291199164|emb|CBJ46278.1| putative outer membrane protein [Erwinia amylovora ATCC 49946] gi|291553528|emb|CBA20573.1| putative type VI secretion system, core protein [Erwinia amylovora CFBP1430] gi|312172236|emb|CBX80493.1| putative type VI secretion system, core protein [Erwinia amylovora ATCC BAA-2158] Length = 407 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 40/110 (36%), Gaps = 3/110 (2%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR-DNWRLSLD 290 +F + PE ++ ++ + + I +TD + N+ S Sbjct: 282 PADSLFSPPGTELTPEGRALIARVASAMESLKGTLLIAVYTDNRLLPSTQFTSNYEYSAA 341 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 +A + ++M+ + G A R + + + NRR++I + Sbjct: 342 QAQAISNMMMQLIAQPCINVRAEGRADSRELLPNSSAHNRAQNRRVEITL 391 >gi|316936147|ref|YP_004111129.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315603861|gb|ADU46396.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1] Length = 216 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ +S+ + ++ +G+ L+ + GHTD+ N LS RA Sbjct: 106 FEYNSANISRQAAPAVEALGKALSSPDLKGATFVVAGHTDSV---GGEGFNQELSERRAD 162 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + +VL++ ++ + + G+ RLK + P + NRR+ ++ Q Sbjct: 163 TIKRVLVEKYDIAGADLVTV-GYGESRLKDPAHPDSGVNRRVQVVNMSDQ 211 >gi|238755499|ref|ZP_04616838.1| Outer membrane protein and peptidoglycan-associated (lipo)protein [Yersinia ruckeri ATCC 29473] gi|238706255|gb|EEP98633.1| Outer membrane protein and peptidoglycan-associated (lipo)protein [Yersinia ruckeri ATCC 29473] Length = 92 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 6/80 (7%) Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I + GHTD+ N RLS RA + L G+ I + G Sbjct: 17 NHIRLNGHTDSM---GEDSYNDRLSYGRASAVADTLATIGMPRANID-VRGLGKLNPVAD 72 Query: 324 SDPM--NSANRRIDILVEDR 341 + + NRR+ ++V Sbjct: 73 NHTAKGRAENRRVAMIVTAP 92 >gi|167033093|ref|YP_001668324.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1] gi|166859581|gb|ABY97988.1| OmpA/MotB domain protein [Pseudomonas putida GB-1] Length = 435 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 51/171 (29%), Gaps = 11/171 (6%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P + + + Q + + + A + + Sbjct: 270 PANPKPQSKALADFAQSPAGQAIVAQQGFVSQQIKAQPVPPQSDMPPRYRTLAQQAQRLS 329 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSL 289 F + S+ + + +Q++ E L + G D A LS Sbjct: 330 VNFRFQEGSASLDNKALRDVQRVAEYLRQAGKLQSKAVLVGFGDPKETPGRAAL---LSR 386 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 RA + + L + GV + +++G ++ NRR+++ V Sbjct: 387 LRAQAVRRELARDGVE---VLEVTGMGDELPVAGNELEQGRLRNRRVEVWV 434 >gi|254495661|ref|ZP_05108581.1| outer membrane protein [Legionella drancourtii LLAP12] gi|254355112|gb|EET13727.1| outer membrane protein [Legionella drancourtii LLAP12] Length = 235 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 42/143 (29%), Gaps = 12/143 (8%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQ-----RNTPMFDKSSSIPLPETIVVLQKIG 256 + + + + I D F S LQ I Sbjct: 74 AVVNTGTNPKGRIIRTLQRCDIQFIQYGDTMTLNIPTDKYFMFESPRLNEINYKGLQNII 133 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 +L E + + G TD RLS +A S L +G+ R+ G+ Sbjct: 134 ALLRLYPESHVYVAGFTDNV---GTEDHKKRLSQAQAESMMTYLWANGIQAQRLKP-EGY 189 Query: 316 AHHRLKIASD--PMNSANRRIDI 336 + ++ NRRI+I Sbjct: 190 GDKNTVADNALIHGSAMNRRIEI 212 >gi|298487201|ref|ZP_07005250.1| Phosphate-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158225|gb|EFH99296.1| Phosphate-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 408 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 14/165 (8%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + A+ R + + ++ T+ L + + F + Sbjct: 253 QRWAQALVRFAQSAEGQAIVAQTVQALKVQPTAQM---PADYQALARKAERLSVNFRFAQ 309 Query: 240 SSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 S+ + L+++ E L + +++ G DA A LS RA + Sbjct: 310 GSAKLDNKAQQDLKRVAEYLKTSNQLNQHVTLVGFGDAKSDPARAAL---LSRLRAMAVR 366 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + L+KSGV+ I G +D + NRR+++ V+ Sbjct: 367 RELLKSGVT---FRDIVGLGDEMPVATNDIDDGRIKNRRVEVWVQ 408 >gi|34499026|ref|NP_903241.1| outer membrane protein A [Chromobacterium violaceum ATCC 12472] gi|34104876|gb|AAQ61233.1| outer membrane protein A precursor [Chromobacterium violaceum ATCC 12472] Length = 226 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 48/130 (36%), Gaps = 28/130 (21%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNWRLSL 289 +FD + S+ + L + L + + G+TD F + N LS Sbjct: 90 VLFDFNKSVLRADAKNELDPLVAKLKAHAGKGYLNGVEVDGYTD---FMGSDKLNNALSQ 146 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSAN------------- 331 +RA + + +GV ++++ I G K+ + P + N Sbjct: 147 NRADAVKAYFVNAGVPAEKVTSI-GKGKAEAKMTEECKAKFPKYAKNKKQNAEIKACIES 205 Query: 332 -RRIDILVED 340 RR+++ ++ Sbjct: 206 DRRVEVTIDA 215 >gi|332534220|ref|ZP_08410065.1| 18K peptidoglycan-associated outer membrane lipoprotein [Pseudoalteromonas haloplanktis ANT/505] gi|332036300|gb|EGI72771.1| 18K peptidoglycan-associated outer membrane lipoprotein [Pseudoalteromonas haloplanktis ANT/505] Length = 180 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 Q FD + + +L+ E L + V I GH D N L Sbjct: 74 QEQVIYFDFDKATVEGKYADLLRAHAEFLVQNPSVKVLIEGHADER---GTPEYNIALGE 130 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 R + + L+ GVS ++ + + + + S + + NRR ++ Sbjct: 131 HRGQAVEKYLLSLGVSASQM-SVVSYGEEKPMVKSRTESAFAKNRRAVLV 179 >gi|237725269|ref|ZP_04555750.1| major outer membrane protein OmpA [Bacteroides sp. D4] gi|229436535|gb|EEO46612.1| major outer membrane protein OmpA [Bacteroides dorei 5_1_36/D4] Length = 395 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 73/209 (34%), Gaps = 9/209 (4%) Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 ++ +E+ + T + + + P + L + Sbjct: 192 WDLNLELYGMGTENKFDGKTTSKGPDFMAGATVGITYKFPQRGFKPAPDVDAIMALTSSQ 251 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + L A + T + + I + F S++ + Sbjct: 252 MDAINTALAQQIEQNRQLKAQLANQSTEVVTEQVTV-NQIAPAPQSVFFQIGSAVLPTNS 310 Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 V LQ+I +++ + + + G+ D+ A N +LS DRA + L+K GV+++ Sbjct: 311 TVNLQQIADLVKDNPGLKLKVTGYADS--DTGSAAWNKQLSEDRANNVANELVKLGVNKN 368 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDI 336 + ISG + + + NRR+ I Sbjct: 369 NLI-ISGMGG----VNTLTPPAFNRRVII 392 >gi|254779677|ref|YP_003057783.1| Peptidoglycan-associated lipoprotein precursor; putative petide signal [Helicobacter pylori B38] gi|254001589|emb|CAX29646.1| Peptidoglycan-associated lipoprotein precursor; putative petide signal [Helicobacter pylori B38] Length = 179 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD L +I + + + + G+TD + N L + R S Sbjct: 78 FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L+ GV +D I IS F + K A NRR+D+ + Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 177 >gi|323529167|ref|YP_004231319.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001] gi|323386169|gb|ADX58259.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001] Length = 366 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 57/196 (29%), Gaps = 15/196 (7%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 +++ + + ++ E + + +RL D +K + + Sbjct: 151 EAKTSPLFPQCQEAQRLTACSEVEMIHAGHEAWTRNFNESQRLVDAVEKGLPGIGTALGA 210 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--S 267 + +++ LP L ++ L +V Sbjct: 211 CTPPVAVKAVPEIPPKMTLQADATFKFDRSDLGGMLPAGKAKLDQLVRDLKQVDDVTGIR 270 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDP 326 I G+TD N +LS RA + + L GVS G + +D Sbjct: 271 IEGYTDRL---GSESYNRQLSTRRAETVKRYLQNGGVSTP--IAARGRGKDNPVVQCNDR 325 Query: 327 MNSA-------NRRID 335 A NRR++ Sbjct: 326 NRQALIDCLAPNRRVE 341 >gi|152984447|ref|YP_001351357.1| flagellar motor protein [Pseudomonas aeruginosa PA7] gi|150959605|gb|ABR81630.1| flagellar motor protein [Pseudomonas aeruginosa PA7] Length = 254 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 70/194 (36%), Gaps = 26/194 (13%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 L + ++ + L+ + + L V +G+ E + ++SI + Sbjct: 45 EIQKELKERQVQFEQELVELKKAEQVRRTILDEAVEALRKRGIKVEVSENHTVLSIPNDL 104 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST---------EVISIRGHTDASPFRN-IAR 282 FD + +IG+V+ + I I GHTD P + + + Sbjct: 105 LG--FDTGAYDIHAAYQARALEIGKVINEVISREDRVEFLDTIFIEGHTDNRPLQGFMGK 162 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRI-----------SKISGFAHHRLK-IASDPMNS- 329 NW LS RA S +Q + ++++ +SG+ R + + Sbjct: 163 GNWGLSTFRAISLWQFWGSALSPDEQLARLKNKDGKPLFSVSGYGETRPVLVDQQTEDDF 222 Query: 330 -ANRRIDILVEDRQ 342 NRRIDI R+ Sbjct: 223 KRNRRIDIRFTIRR 236 >gi|330955558|gb|EGH55818.1| OmpA/MotB [Pseudomonas syringae Cit 7] Length = 265 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 11/211 (5%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 ++ S + K D K + + + + + S + Sbjct: 27 WYWPFGSNDNAQAKPDAVADKPAAKPAAPAMVAKSETDSKWWWPFGNDSAKDEPKALPMP 86 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETI 249 + + L A E + I+ F+ L P T+ Sbjct: 87 DPKVTQAWLDEYEPRLRAAIKDSPFQLERREDLLAIT---APVDSSFNPDRPAMLLPNTL 143 Query: 250 VVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + ++ +V+ + I GH D N ++S +RA S + SG+ +R Sbjct: 144 GPITRLAKVVEGDQKTAVLILGHADT---SGPTEANQKISQERAQSVAAIFRLSGLERNR 200 Query: 309 ISKISGFAHHRLKIASDP--MNSANRRIDIL 337 +S+ G + A+D + NRR++IL Sbjct: 201 LSQ-RGMGAVMPRAANDSLQGRALNRRVEIL 230 >gi|291612991|ref|YP_003523148.1| peptidoglycan-associated lipoprotein [Sideroxydans lithotrophicus ES-1] gi|291583103|gb|ADE10761.1| peptidoglycan-associated lipoprotein [Sideroxydans lithotrophicus ES-1] Length = 175 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + + F +Q G L + + + G+ D N L Sbjct: 66 EIRSVYFPFDVDAVQDGDRAAIQAHGAYLGKNDSVKVRVEGNADER---GSTEYNLALGQ 122 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDIL 337 RA + ++L+ SG ++ +S F + + A + S NRR DI+ Sbjct: 123 RRANNVKKLLVLSGAKASQVETVS-FGEEKPRCADHMESCWSQNRRADIV 171 >gi|225621015|ref|YP_002722273.1| putative peptidoglycan-associated outer membrane lipoprotein [Brachyspira hyodysenteriae WA1] gi|225215835|gb|ACN84569.1| putative peptidoglycan-associated outer membrane lipoprotein [Brachyspira hyodysenteriae WA1] Length = 243 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 7/166 (4%) Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL--SGLVADNIVKG 214 T + I K++ + KEK + ++ A++ L + + + + Sbjct: 44 QSTKTASKTYIQKDDITTVADPIKEKKEYTNTQAQVSKKAEEKKEELTNNDALEEEKPQV 103 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTD 273 + I+ N FD S E + +I + L ++ ++ I GH+D Sbjct: 104 IKQTEVIQKDDNEILLTANIISFDFDSYELKNEYNEGIDEICKYLNNNRDINLIIEGHSD 163 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + N LS +RA + + L+ G+ +DR+ I G+ Sbjct: 164 SI---GDSNYNIYLSENRAKAIFDKLVDKGIDKDRLRYI-GYGSTH 205 >gi|330971267|gb|EGH71333.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT] Length = 447 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 53/173 (30%), Gaps = 11/173 (6%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 P + ++ + Q + + + + + Sbjct: 281 PTSTPQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 340 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288 F + S+ + L+++ + L +++ G DA A LS Sbjct: 341 SVNFRFAQGSARLDNKAQQDLKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAAL---LS 397 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 RA + + L+K GV+ I G + D NRR+++ V+ Sbjct: 398 RLRAMAVRRELLKRGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447 >gi|319956779|ref|YP_004168042.1| ompa/motb domain protein [Nitratifractor salsuginis DSM 16511] gi|319419183|gb|ADV46293.1| OmpA/MotB domain protein [Nitratifractor salsuginis DSM 16511] Length = 490 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 68/181 (37%), Gaps = 27/181 (14%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++ I +++++ I + + + + K + + + +S + +FDK Sbjct: 300 EDLIARLRKQRARIKSLTGIRLKVIDALKETLGKRIAIDKKSGALRLS-----SKILFDK 354 Query: 240 SSSIPLPETIVVLQ----------KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 S+ E L+ + + I I GHTD+ N LS Sbjct: 355 GSAELKEEAKAELKDTFEKYIAALMSNRAIRPYLDRIIIEGHTDSD---GGYLYNLELSQ 411 Query: 290 DRAYSAYQVLMKSGVSE----DRISKISGFAHHRLKIAS--DPMNSANRRIDI--LVEDR 341 RA + L+ +++ + SG A+ I + + ++ RRI+I + +R Sbjct: 412 KRALAVMNYLLSLPIAQKYHLKKYLVASGRAYMDPIIKNGVEDKEAS-RRIEIKFTLRNR 470 Query: 342 Q 342 + Sbjct: 471 E 471 >gi|319902641|ref|YP_004162369.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] gi|319417672|gb|ADV44783.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] Length = 386 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 80/259 (30%), Gaps = 13/259 (5%) Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 G + +S + DE++ + + D KI + N + N + Sbjct: 137 GGPTANYSSKGTSFTNATTATDEYLLETNGDKKIRFGATAGLGLSYDINAKWAINLEGRV 196 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISS 201 S+ D+ + + L + + + +++ Sbjct: 197 GVTPSIFGDASDCRKAEATARLNLGV-AYTFGGKKFARVSNVDEDALNAEINKYRSELAQ 255 Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + L + T+ + + F S+ V ++ +VL Sbjct: 256 AQADLANAKNALANVKPETKEVVKEVQVAGPRAIFFKIGSAKIDDYGKVNIELAAKVLKA 315 Query: 262 STEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 +++ I G+ D A N +LS RA + Y L+ GV +D++ + GF Sbjct: 316 NSDKKYKIAGYAD--KATGSASWNQKLSEKRAQAVYDALIAQGVDKDQLELV-GFGGTEN 372 Query: 321 KIASDPMNSAN--RRIDIL 337 N R+ IL Sbjct: 373 MF------GKNFLNRVVIL 385 >gi|126662707|ref|ZP_01733706.1| possible outer membrane protein [Flavobacteria bacterium BAL38] gi|126626086|gb|EAZ96775.1| possible outer membrane protein [Flavobacteria bacterium BAL38] Length = 283 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 8/115 (6%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRL 287 ++ ++ F+ + E + + E + I G+ D N+ L Sbjct: 21 DEEVHSIFFEFNKFNLKEEQADAVVAFVSKIDTSRIESVQIFGYCDDR---GKDAYNYTL 77 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFA----HHRLKIASDPMNSANRRIDILV 338 S +RA + L++ G+ I + G ++ S NRR+D++V Sbjct: 78 STNRANTVKDKLIEKGIKSKIIITLEGKGRIMLDEDMQTNIPEARSKNRRVDVVV 132 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 63/167 (37%), Gaps = 10/167 (5%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 E + + R ++ + +V +++ ++ T + +I + +F++ Sbjct: 111 DEDMQTNIPEARSKNRRVDVVVNFKPIVVEDLKIPGVYSTIKKDRIIDDRIYLDHVLFER 170 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW-----RLSLDRAY 293 SS + L +I L I+GH +P + LS++RA Sbjct: 171 GSSQLTYKAKKELDRIALELHKYKNIHFEIQGHVCCTPTFQKEAIDRDTKKRELSINRAK 230 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 Y + +S+ R+ G+ + + ++ RR+++L+ Sbjct: 231 RVYNYFLMKRISKTRM-TFKGYGNTQSLKKGSTLD---RRVELLITK 273 >gi|239929192|ref|ZP_04686145.1| secreted protein [Streptomyces ghanaensis ATCC 14672] Length = 195 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 19/194 (9%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + T +++ + T+ S E + P L + K L D+ + + Sbjct: 10 ATTAYADESPSVPPGTEATASAPVELDPNDPDLKLPDGATLAEPKVL-DIKQVVEDQSGD 68 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTE 264 ++ V F + +F K S+ + + I E + + Sbjct: 69 ERREDTNSDVKFAL------------QAEVLFGKDSAKLGAQAKARIATIAEEIKTQNAT 116 Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I + G TD + LS RA + + VL + D ++ G+ + Sbjct: 117 RIRVFGFTDNL---GSSAHGDVLSRQRANAVHGVLEQELNDSDVTYEVRGYGEQYPIADN 173 Query: 325 DPMNSA--NRRIDI 336 NRR++I Sbjct: 174 STEAGRKKNRRVEI 187 >gi|56460901|ref|YP_156182.1| Sodium-type flagellar protein motY precursor [Idiomarina loihiensis L2TR] gi|56179911|gb|AAV82633.1| Sodium-type flagellar protein motY precursor [Idiomarina loihiensis L2TR] Length = 298 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 8/101 (7%) Query: 238 DKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + S + L++I + L + E++ + +TD+ R N L+ RA Sbjct: 190 EADSEKLTLSSQRKLKQISDYLQVDNELELVLVDAYTDSLGARGP---NQELTEQRAKEI 246 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRI 334 Q ++ G+ +RI ++ R ++D NRR+ Sbjct: 247 QQFFVERGIDAERIKTVA-HGEDRPVKSNDNEINRQINRRV 286 >gi|291451540|ref|ZP_06590930.1| secreted protein [Streptomyces albus J1074] gi|291354489|gb|EFE81391.1| secreted protein [Streptomyces albus J1074] Length = 220 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 68/184 (36%), Gaps = 11/184 (5%) Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + + D + PP + A + +LA + +V +++ Sbjct: 25 HVAHADDDDPVAPPGSTTSSPPPEISEDSAGLKLADGAELAPPKVLDIKSVV-EDLGGEE 83 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDA 274 E T T + ++ + +F K S+ PE +Q I E + + G TD Sbjct: 84 RREDTNTDVKFALQAE---VLFGKDSAKLNPEARGRIQAIAEEAQAQQANKVRVFGFTDD 140 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 +LS +RA + ++ L+K+ + + ++ G++ + NR Sbjct: 141 L---GSYEHGKKLSKNRADAVHEELVKT-LGPNVTYEVRGYSEDYPIADNSTEAGRMKNR 196 Query: 333 RIDI 336 R+++ Sbjct: 197 RVEV 200 >gi|222086232|ref|YP_002544764.1| outer membrane protein [Agrobacterium radiobacter K84] gi|221723680|gb|ACM26836.1| outer membrane protein [Agrobacterium radiobacter K84] Length = 838 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 65/229 (28%), Gaps = 13/229 (5%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 T + R+ + Q + ++ LP Sbjct: 600 ETIDQPDGDRIITVRNRYGDIIQRSRVDADGREYVLFYSPELEQQPDHDDYFRDPGDSLP 659 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS---IIDQRN 233 P+ L+ + L + + + R I + Sbjct: 660 PMRLLIPLSQYIIDTGTERDSDYYDFLREPPVEPVERIYSVNEVRYSARIRDKVRRIDLD 719 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLS 288 T F S+ L+ + + + TE I GHTDA A N LS Sbjct: 720 TITFATGSAEIPMSQASTLRGVADAIGQIIKKDPTETFLIEGHTDAV---GSAESNLILS 776 Query: 289 LDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 RA S +VL GV + + G+ LK+ + NRR+ I Sbjct: 777 DQRAESVAKVLSDVYGVPPENLVA-QGYGEQYLKVNTQGPEQENRRVTI 824 >gi|300727149|ref|ZP_07060568.1| putative immunoreactive 42kD antigen PG33 [Prevotella bryantii B14] gi|299775693|gb|EFI72284.1| putative immunoreactive 42kD antigen PG33 [Prevotella bryantii B14] Length = 382 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 53/161 (32%), Gaps = 18/161 (11%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + L + +L L ++ + + + + + + + F+ Sbjct: 233 EALNALNQSQLDALNSQLEDA--NAENERLRGELEAKQSNQTSSVVYKSAPVSVFFNIGK 290 Query: 242 SIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + +V L+ + + I + G+ D+ A N +LS RA + + L+ Sbjct: 291 TKIASSKDMVNLESFAKSAKENNNKILVTGYADSK--TGSAEYNQKLSQSRADAVVEALV 348 Query: 301 KSGVSEDRISKISGFA---HHRLKIASDPMNSANRR--IDI 336 K GV + + NRR ++I Sbjct: 349 KFGVDKS-MITTQAKGGVDDLSPVDN-------NRRATVEI 381 >gi|126730858|ref|ZP_01746667.1| OmpA domain protein [Sagittula stellata E-37] gi|126708574|gb|EBA07631.1| OmpA domain protein [Sagittula stellata E-37] Length = 318 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ + I L + + L+ + + GHTDA+ N +SL RA +A Sbjct: 213 FRSGSTDLGGDDIASLDALAQYLSDNPTRRILFVGHTDAT---GSLEANRGVSLRRAQAA 269 Query: 296 YQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L + RI G + ++ NRR++ ++ + Sbjct: 270 VAYLRSRHDTDAGRIGA-EGAGYLAPVASNLTAEGREANRRVEAVLISTE 318 >gi|217969212|ref|YP_002354446.1| peptidoglycan-associated lipoprotein [Thauera sp. MZ1T] gi|217506539|gb|ACK53550.1| peptidoglycan-associated lipoprotein [Thauera sp. MZ1T] Length = 170 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 + + FD S + E +++ L + ++ ++G+TD N L Sbjct: 60 SKRSVFFDFDSFVIKQEARPLIEAHARFLVQNPQMNMLVQGNTDER---GSREYNLALGQ 116 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 RA Q LM G E +I +S + + N + NRR Sbjct: 117 KRADVVKQALMLLGAKESQIESVS-LGEEKPRCEDRTENCYAENRR 161 >gi|126736760|ref|ZP_01752498.1| OmpA/MotB [Roseobacter sp. CCS2] gi|126713731|gb|EBA10604.1| OmpA/MotB [Roseobacter sp. CCS2] Length = 592 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 44/112 (39%), Gaps = 10/112 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293 F ++ + I +++I ++ + + G TD+ +N L+ RA Sbjct: 483 FLTGQAVLDTKAIADIKRISSIVRSAEYEGYEVLVFGFTDSV---GTINNNIALAERRAQ 539 Query: 294 SAYQVLMK--SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + VL+ +G+ +D I G +D NRR+++ + R Sbjct: 540 TVKDVLIAENAGILDDETVSIFGMGPIAPVNCNDTSVGRDLNRRVEVWIRPR 591 >gi|260914077|ref|ZP_05920550.1| lipoprotein PlpD [Pasteurella dagmatis ATCC 43325] gi|260631710|gb|EEX49888.1| lipoprotein PlpD [Pasteurella dagmatis ATCC 43325] Length = 275 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 17/116 (14%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + V+ + L S + + + G TD A N LS R Sbjct: 138 GDFLFDFDKDALTAKGKEVVDSVATQLKSSGAKEVKVAGFTDRL---GSAAYNLDLSQRR 194 Query: 292 AYSAYQVLMKSGVSEDRISKISGFA--------HHRLKIAS--DPMNSANRRIDIL 337 A L++ GV+ + I+ + G+ D + NRR++I Sbjct: 195 ANRVKARLIEQGVNAN-INAV-GYGKAQQVKACEEYPFGKQLKDCLRP-NRRVEIT 247 >gi|312961750|ref|ZP_07776248.1| phosphate transport system substrate-binding protein [Pseudomonas fluorescens WH6] gi|311284009|gb|EFQ62592.1| phosphate transport system substrate-binding protein [Pseudomonas fluorescens WH6] Length = 443 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 14/160 (8%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + + + I+ + + + I F++ S+ Sbjct: 292 AQSGKGQAIVAANGFIAQQVQAMAVE---PRASMPEDYQAIARDAQRLSVNFRFEEGSAS 348 Query: 244 PLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + L+++ L + +++ G DA A LS RA + + L+ Sbjct: 349 LDNKARQDLRRVVAYLKGHDKLDKQVTLVGFGDAKNDPQRAAL---LSKLRAMAVRRELV 405 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 K+GV + +I GF A+ NRR+++ V Sbjct: 406 KNGVV---LREIRGFGAQMPVAANTADEGRIKNRRVEVWV 442 >gi|260467234|ref|ZP_05813410.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075] gi|259029009|gb|EEW30309.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075] Length = 403 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 10/137 (7%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----A 260 + + + I+ +T F+ SS + LQ + + + Sbjct: 257 ERVQRLYSINEVKRSARVRDIARRIDLDTLNFEFGSSSISDTEVQKLQGVADAMEKLLKK 316 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHR 319 + E I GHTDA N LS RA + + L + G+ + ++ G+ Sbjct: 317 NPAETFLIEGHTDAV---GTPEANLALSDRRAEAVAEALTNAFGIPAENLTT-QGYGEEY 372 Query: 320 LKIASDPMNSANRRIDI 336 LK+ + N NRR+ I Sbjct: 373 LKVDTSAPNRENRRVAI 389 >gi|146281899|ref|YP_001172052.1| putative outer membrane protein [Pseudomonas stutzeri A1501] gi|145570104|gb|ABP79210.1| putative outer membrane protein [Pseudomonas stutzeri A1501] Length = 229 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 11/167 (6%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 ++K + + L + E ++++ Sbjct: 40 SSKGEKKPSEAAAPVAPKVDYAWLDEYEPKLRDALVDSRFEVERRDNVLVVT---APVDS 96 Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ L + L + I GH D++ N +S +RA Sbjct: 97 SFNPDRPGMLLPVTLGPITRVAKLVEKDEKTAVVILGHADST---GADDVNRTISRERAS 153 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + + SG DR+ +I G + A+D NRR+++++ Sbjct: 154 AVAAIFRLSGFKHDRL-RIRGLGSDMPRAANDSKEGRAMNRRVEMVL 199 >gi|89067611|ref|ZP_01155065.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola granulosus HTCC2516] gi|89046581|gb|EAR52636.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola granulosus HTCC2516] Length = 675 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 69/233 (29%), Gaps = 16/233 (6%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 + + + + ++ + + ++ R G + D Sbjct: 442 QPGAEVQTVSFADGSTRTIVTRDDGSQVVTIRAADGTVVRRERIMPDGTRVILFDDTTDV 501 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + + + L LA +S I + I + Sbjct: 502 APVDVTALPDAPQPRDVSLSDEEALLAALAASNASYDRTFSLRQIRQIKEVRALAPEIAL 561 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIA 281 F+ +S+ PE L +G+ + + V I GHTDA A Sbjct: 562 E------EINFETASAAIRPEEAEELAALGQAITAIIRENPRAVFLIEGHTDAV---GNA 612 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333 N LS RA S L + GV + + G+ +L + + ANRR Sbjct: 613 SYNLALSDRRAESVALALTEYFGVPPENLVT-QGYGESQLLVPTAEAERANRR 664 >gi|193222184|gb|ACF16363.1| outer membrane protein A [Riemerella anatipestifer] gi|194295638|gb|ACF40846.1| outer membrane protein [Riemerella anatipestifer] gi|194295642|gb|ACF40848.1| outer membrane protein [Riemerella anatipestifer] gi|194295644|gb|ACF40849.1| outer membrane protein [Riemerella anatipestifer] Length = 270 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 63/248 (25%), Gaps = 21/248 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 42 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 101 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 102 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 145 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 146 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 205 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 206 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 262 Query: 312 ISGFAHHR 319 G Sbjct: 263 -KGVGSAE 269 >gi|152997425|ref|YP_001342260.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1] gi|150838349|gb|ABR72325.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1] Length = 272 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 48/129 (37%), Gaps = 7/129 (5%) Query: 18 KKK---VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGK 74 +++ + W + YADF+T+L AFF+ ++ ++ + ++ +++ + Sbjct: 11 RRRVVTKSSPSGAQGRDRWILSYADFITLLFAFFVALYSLSLKNSGDEQRLKETLHGVFD 70 Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + + K I N E D+ + E + I +N Y L + Sbjct: 71 AVQKSIKPI----NIGEPIVGEPKDIEVVETKPIPAAPPTIEESNSSAVYALLSQVVENQ 126 Query: 135 SNSQQSEHC 143 + + Sbjct: 127 FSGLHASGQ 135 Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 80/222 (36%), Gaps = 10/222 (4%) Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 Y N +++ H + S K ++ + E + P + I Sbjct: 48 YSLSLKNSGDEQRLKETLHGVFDAVQKSIKPINIGEPIVGEPKDIEVVETKPIPAAPPTI 107 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 L++ + + SGL + + + + + + ++ +F + Sbjct: 108 EESNSSAVYALLSQVVENQFSGL---HASGQISVTESADWVSLEL---KSGLLFGQGEYD 161 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDNWRLSLDRAYSAYQVLMKS 302 E + +L + VL VI + G+TD P + NW LS R+ S L+ Sbjct: 162 LTNEAVALLILVANVLKAHPSVILVEGNTDDLPVNSRRLISNWHLSSLRSSSVVDELVYR 221 Query: 303 GVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342 GV ++ GF+ K+ +D NRR+ + + R+ Sbjct: 222 GVDP-KMIAPIGFSSEHPKVRNTNDYARQQNRRVILRISKRE 262 >gi|90415116|ref|ZP_01223071.1| hypothetical OmpA family protein [Photobacterium profundum 3TCK] gi|90323761|gb|EAS40380.1| hypothetical OmpA family protein [Photobacterium profundum 3TCK] Length = 252 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 29/252 (11%), Positives = 69/252 (27%), Gaps = 21/252 (8%) Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 L +T + + G + Sbjct: 7 TTLVTAALLTSAMAPTAYANQADLQTADDTYVVGEQEQLIGLGSGAAFGALVGGPVGAVI 66 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST-LSGLVADNIVKGVL 216 ++ + +++ + R L+ + + + ++ Sbjct: 67 GAMVGGIVGTAVGQDEHIKSQNEDMVELTARNTELERIDVNYNQAQIEIARLQQDLQLQS 126 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDAS 275 E + +++ F SS P L +I E++ S E+ + G+ D Sbjct: 127 EERQALMLEVNVH-------FRTGSSDIEPLFQQQLDEIAELMKQSPEMSWQLAGYADRR 179 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---- 331 ++ N+ LS+ R + L G+ D++ + + + N Sbjct: 180 ---GDSQKNFDLSMRRVDAVRDYLESQGIDTDQLL-VDAYGDLEPLKSEQNFE--NDFFD 233 Query: 332 RRIDILVEDRQG 343 RR+ + QG Sbjct: 234 RRV--TLRSTQG 243 >gi|239934074|ref|ZP_04691027.1| secreted protein [Streptomyces ghanaensis ATCC 14672] Length = 205 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 37/111 (33%), Gaps = 6/111 (5%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRL 287 + + +F K S + I + + + G TD + L Sbjct: 87 YELQAAVLFAKDSGRLSDSARSRIAAIAREIEQRAATRVRVTGFTDNL---GSSVHGDIL 143 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 S RA + VL SE + GF R ++ S NRR++I Sbjct: 144 STQRADAVRDVLTDDLRSEAVTFETHGFGERRPVASNATEASRRENRRVEI 194 >gi|21672596|ref|NP_660663.1| outer membrane protein A precursor [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25090843|sp|Q8K9L4|OMPA_BUCAP RecName: Full=OmpA-like protein; Flags: Precursor gi|21623226|gb|AAM67874.1| outer membrane protein A precursor [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 347 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 43/126 (34%), Gaps = 32/126 (25%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F +S+ P + LQK+ + + + I + GH D N +LS +RAY Sbjct: 233 FPFNSTELKPISHDKLQKLQKEIKNIKSKNIFIMLSGHADRI---GNKEYNQKLSENRAY 289 Query: 294 SAYQVLMKSGVSEDRISKISGFA-------------HHRL-----KIASDPMNSANRRID 335 S G+S+D+I I G R RR++ Sbjct: 290 SIKNYFTSHGISQDKI-SIQGMGNEFSLTNQICKDVSDRPLLISCLAPD-------RRVE 341 Query: 336 ILVEDR 341 I V Sbjct: 342 IEVLSD 347 >gi|237751977|ref|ZP_04582457.1| lipoprotein [Helicobacter winghamensis ATCC BAA-430] gi|229376544|gb|EEO26635.1| lipoprotein [Helicobacter winghamensis ATCC BAA-430] Length = 167 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 9/117 (7%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIA 281 + + +Q FD + + + VL S + I G+TD Sbjct: 51 INYVENQLQNIFFDFDKFVVRADMQNAIDNDASVLTSSAMGPLTVRIEGNTDEW---GTD 107 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 N+ L L RA + + L+ GV E + +S + + + + NR++ Sbjct: 108 EYNYALGLKRAVAVKEALIAKGVEESKTVLVS-YGESKPTCTAKTKECWAENRKVTF 163 >gi|115379571|ref|ZP_01466660.1| peptidoglycan-associated lipoprotein [Stigmatella aurantiaca DW4/3-1] gi|115363429|gb|EAU62575.1| peptidoglycan-associated lipoprotein [Stigmatella aurantiaca DW4/3-1] Length = 134 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 7/107 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 ++ S+ PE+ L+++ E L ++I GHT N L R Sbjct: 20 GPIYYELDSTTLRPESRETLERLAEALRRRPGARVTISGHTCEL---GTTEYNLALGQRR 76 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 A A L+K GV + + + + + + + S NRR + Sbjct: 77 AAMAKDYLVKLGVGPGNV-AVVSYGEESPAVLGSGEEVWSRNRRSEF 122 >gi|111220228|ref|YP_711022.1| hypothetical protein FRAAL0749 [Frankia alni ACN14a] gi|111147760|emb|CAJ59419.1| Putative outer membrane protein [Frankia alni ACN14a] Length = 186 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +FD +SS E + LQ++ + IS+ G++D DN +LSL+RA S Sbjct: 89 LFDSNSSELRGEAMTALQQVLPAIREHPGPISVIGYSDGL---GRTEDNQKLSLERAKSV 145 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 L + + + G +++ RR++I++ Sbjct: 146 EAWLATQNIPSS-VLDVEGRGEQG--AQDGVADASRRRVEIVLR 186 >gi|297157602|gb|ADI07314.1| secreted protein [Streptomyces bingchenggensis BCW-1] Length = 228 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + +FDK+SS E ++ I + + + + + G TD A +LS + Sbjct: 119 QAEVLFDKNSSKLGGEANARIRAIAQEIEKQNATSVRVFGFTDDL---GSALHGLKLSKE 175 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 RA + L + + +I G+ + NRR+++ Sbjct: 176 RANAVQHAL-SANLDSSVQYQIRGYGEQYPIADNSTEEGRKKNRRVEV 222 >gi|262341165|ref|YP_003284020.1| OmpA/MotB domain-containing protein [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272502|gb|ACY40410.1| OmpA/MotB domain-containing protein [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 413 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 17/112 (15%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARDNWRLSLD 290 + +FD P ++ ++ +I E++ +S I G+TD+ N LSL Sbjct: 315 SPILFDLGKFALTPRSLSIVNEIAEIIINSLPNSKFYIDGYTDS---HGKLSYNKTLSLK 371 Query: 291 RAYSAYQVLMKSGVSEDRISKISGF--AHHRLKIASDPMNSANRRIDILVED 340 RA S ++ L+ GV RI ++ G ++ RR++I + Sbjct: 372 RANSVFEALISKGVDSSRI-EVRGLVGGKYK---------KKGRRVEITIRK 413 >gi|213582299|ref|ZP_03364125.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 78 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 12/69 (17%) Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----PMNSA------N 331 N LS RA S L+ G+ D+IS G + P + + Sbjct: 1 YNQGLSEKRAQSVVDYLISKGIPSDKISA-RGMGESNPVTGNTCDNVKPRAALIDCLAPD 59 Query: 332 RRIDILVED 340 RR++I V+ Sbjct: 60 RRVEIEVKG 68 >gi|291442513|ref|ZP_06581903.1| secreted protein [Streptomyces ghanaensis ATCC 14672] gi|291345408|gb|EFE72364.1| secreted protein [Streptomyces ghanaensis ATCC 14672] Length = 208 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 37/111 (33%), Gaps = 6/111 (5%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRL 287 + + +F K S + I + + + G TD + L Sbjct: 90 YELQAAVLFAKDSGRLSDSARSRIAAIAREIEQRAATRVRVTGFTDNL---GSSVHGDIL 146 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 S RA + VL SE + GF R ++ S NRR++I Sbjct: 147 STQRADAVRDVLTDDLRSEAVTFETHGFGERRPVASNATEASRRENRRVEI 197 >gi|222100883|ref|YP_002535451.1| Motility protein B [Thermotoga neapolitana DSM 4359] gi|221573273|gb|ACM24085.1| Motility protein B [Thermotoga neapolitana DSM 4359] Length = 288 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 7/58 (12%), Positives = 19/58 (32%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 + W Y+D +T+L+ FF+ + ++ + + + Sbjct: 4 KKQEEQKGSPQWMTTYSDMVTLLLTFFVALISMSTISPGKFQQVAVGLRIALSGQPPS 61 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 7/106 (6%) Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVIS 267 + + E G LI + D F+ S+ E +L K+G++ + H+T V+ Sbjct: 90 EEYKGKITVEERDEGTLIILKD---MVFFETGSAKLTAEAKDLLAKVGQIVIEHTTNVLE 146 Query: 268 IRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + G+TD P +I NW LS RA S + + E R+ + Sbjct: 147 VFGYTDDRPVLPNSIYVSNWHLSSARAASVVNFFLTE-LKEKRMIE 191 >gi|213420489|ref|ZP_03353555.1| putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 59 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 RLS RA S L+ GV RI + SG ++ + NRR++I + Sbjct: 1 MRLSQQRADSVASSLITQGVDASRI-RTSGMGPANPIASNSTAEGKAQNRRVEITL 55 >gi|34540795|ref|NP_905274.1| OmpA family protein [Porphyromonas gingivalis W83] gi|5081701|gb|AAD39496.1|AF145800_1 immunogenic 75 kDa protein PG4 [Porphyromonas gingivalis] gi|34397109|gb|AAQ66173.1| OmpA family protein [Porphyromonas gingivalis W83] Length = 672 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 43/140 (30%), Gaps = 34/140 (24%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 +D + PE++ L ++ +L + ++ + H D + N LS R Sbjct: 535 QNIFYDFDKATLRPESMKSLDELIRILTDNPDIRIELGSHADR---KGPDAYNLGLSDRR 591 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-----------------------PMN 328 A S L G++ DR+ G+ K + Sbjct: 592 AKSVVDYLTSRGIAADRL-TWKGYGKSVPKTVTAKIAERHDFLKEGDVLTEEFVAPLTEE 650 Query: 329 SA------NRRIDILVEDRQ 342 NRR + V + + Sbjct: 651 QQSVCDQLNRRTEFRVIEEE 670 >gi|227498859|ref|ZP_03928999.1| predicted protein [Acidaminococcus sp. D21] gi|226904311|gb|EEH90229.1| predicted protein [Acidaminococcus sp. D21] Length = 354 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F PLP + + +V + + G+TD+ N LS R Sbjct: 252 FASDDDQPLPSERDKMDHLVQVAKDHPDSTFKLVGNTDSD---ASDAYNEDLSKRRVDHV 308 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 Q + +GVS DR+ ++ ++ NRR+D+ Sbjct: 309 AQYVSNNGVSSDRLK-LNYKGEKDPVASNATEQGKADNRRVDV 350 >gi|89072281|ref|ZP_01158860.1| putative sodium-type flagellar protein MotY precursor [Photobacterium sp. SKA34] gi|89051813|gb|EAR57265.1| putative sodium-type flagellar protein MotY precursor [Photobacterium sp. SKA34] Length = 250 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 9/114 (7%) Query: 228 IIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDN 284 D R+ + F + +L + L + V + GHTD N Sbjct: 127 YRDARDVVLQFRLGQRVVSSSQNEILADLASYLKYDKNVKRVLIDGHTDNV---GSNVTN 183 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 ++S RA +L ++GV + +I ++ + NRR+ I Sbjct: 184 LQISKVRADDVASILRENGVRSS-LMEIRSHGSRYPVANNNTQDGKAKNRRVTI 236 >gi|291278011|gb|ADD91480.1| outer mebrane protein A [Riemerella columbina] Length = 326 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 63/251 (25%), Gaps = 21/251 (8%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N AS + +R +D T + + ++ Sbjct: 94 KSTVANFWQASATLNFRFGNQDRDKDGVLDKDDLCPDTPGLAEFQGCPDTDGDGVPDKDD 153 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 N ++ + C T D+ + Sbjct: 154 NCPDVAGPVDNNGCPWPDTDGDGVLDKDDACVDVAGPAENNGCPWPD------------- 200 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 +D + + + + + F+ + PE+ Sbjct: 201 ---RDNDGVLDKDDACPDVPGLAEYNGCPKPQEAYATEATGALQGIFFNFDKATIRPESN 257 Query: 250 VVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L + ++ + + GHTDA + A N RLS +RA S L GVS + Sbjct: 258 GKLDEAANIIKSSNGGTFLVTGHTDA---KGNANYNLRLSRERAASVVAALEARGVSSSQ 314 Query: 309 ISKISGFAHHR 319 + G Sbjct: 315 LKS-KGVGSAE 324 >gi|284035326|ref|YP_003385256.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283814619|gb|ADB36457.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 399 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 FD+SS + PE+ L ++ VL S I IRGHTD N +LS DR Sbjct: 293 RNIYFDQSSPVLRPESSTELDQLAAVLLESPTTKIEIRGHTDNQ---GDFDSNVKLSRDR 349 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 + L G++++R+ + G Sbjct: 350 CQAVIDYLASKGIAKNRLKAV-GRGPIDPVAP 380 >gi|189463696|ref|ZP_03012481.1| hypothetical protein BACINT_00027 [Bacteroides intestinalis DSM 17393] gi|189438646|gb|EDV07631.1| hypothetical protein BACINT_00027 [Bacteroides intestinalis DSM 17393] Length = 397 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + LS + + D L + L P +I Sbjct: 187 ISNAFDINLELSAMGVEDKFDGEVGGDHGYDGVLSATVGLTYRFPARGFRRPMPQLISQI 246 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + +L + + + + L+ T I+ T F S+ Sbjct: 247 ELAAMQDKLAAMGAQNAQLKNALIQAQNQPVAEVTETEV-IVPDPDIAPRTVFFTIGSAE 305 Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P I+ L + E + ++ G+ D+ N LSL RA + L+K+ Sbjct: 306 LSPREIMNLSYLAEQMKQFPNVTYTVNGYADS--ATGTPAFNKELSLKRAQAVKDALVKN 363 Query: 303 -GVSEDRISKISGFA 316 G++ DR++ +G Sbjct: 364 YGIAADRLNIEAGGG 378 >gi|91974956|ref|YP_567615.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] gi|91681412|gb|ABE37714.1| OmpA/MotB [Rhodopseudomonas palustris BisB5] Length = 697 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285 NT F+ S P+ LQ I + L S EV I GHTDA+ DN Sbjct: 565 DLNTITFELGSWDISPDQASKLQAIADGLNRSISRNPREVFLIEGHTDAT---GNDTDNL 621 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA SA +L + V + ++ G+ LK+ SD NRR+ + Sbjct: 622 SLSDRRAESAAALLTQQFAVPAENLTS-QGYGEQYLKVQSDGPERQNRRVTV 672 >gi|59714204|ref|YP_206979.1| outer membrane protein [Vibrio fischeri ES114] gi|59482452|gb|AAW88091.1| outer membrane protein [Vibrio fischeri ES114] Length = 274 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 11/188 (5%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + ++ E ++ A ++L K++ L + + Sbjct: 76 PATVHQAKQNEARIARELEGGLQLDAANDLVIQRNLLKRLERQLDYVKRQETCQPPTDSN 135 Query: 220 T---RTGILISIIDQRNT-PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDA 274 + I D N F +S+ P+ IV L + ++L + I GH DA Sbjct: 136 NGNSDIELAQKIHDLLNRDNQFAFNSAELNPKYIVNLSEASQLLNQHKDFKLLITGHADA 195 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 N L+L+RA + L G+S+ RI + + ++ + NR Sbjct: 196 L---GEEDANQNLALERAKQVKRYLSIFGLSQQRIH-VDSVGSNDPYLSGTEPHVRLTNR 251 Query: 333 RIDILVED 340 R+ I + Sbjct: 252 RVTIELLQ 259 >gi|224536169|ref|ZP_03676708.1| hypothetical protein BACCELL_01035 [Bacteroides cellulosilyticus DSM 14838] gi|224522209|gb|EEF91314.1| hypothetical protein BACCELL_01035 [Bacteroides cellulosilyticus DSM 14838] Length = 396 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 5/195 (2%) Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + LS + + D L + L P +I Sbjct: 186 ISNAVDINLELSAMAAEDKFDGEVGGDHGYDGVLSATVGLTYRFPARGFRRPMPQLISQI 245 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + +L + + ++ L + + V T I+ T F S+ Sbjct: 246 ELAAMQDKLAMMGAQ-NAELKNALVQAENQPVAEVTETQVIVPDPDIAPRTVFFQIGSAE 304 Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P I+ L + E + ++ G+ D+ N LSL RA + L+K+ Sbjct: 305 LSPREIMNLSYLAEQMKQFPNATYTVNGYADS--ATGTPAFNKELSLKRAQAVKNALVKN 362 Query: 303 -GVSEDRISKISGFA 316 G++ DR++ +G Sbjct: 363 YGIAADRLNVEAGGG 377 >gi|197336852|ref|YP_002158687.1| OmpA family protein [Vibrio fischeri MJ11] gi|197314104|gb|ACH63553.1| OmpA family protein [Vibrio fischeri MJ11] Length = 274 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 11/188 (5%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + ++ E ++ A ++L K++ L + + Sbjct: 76 PATVHQAKQNEARIARELEGGLQLDAANDLVIQRNLLKRLERQLDYVKRQETCQPPTDSN 135 Query: 220 T---RTGILISIIDQRNT-PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDA 274 + I D N F +S+ P+ IV L + ++L + I GH DA Sbjct: 136 NGNSDIELAQKIHDLLNRDNQFAFNSAELNPKYIVNLSEASQLLNQHKDFKLLITGHADA 195 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 N L+L+RA + L G+S+ RI + + ++ + NR Sbjct: 196 L---GEEDANQNLALERAKQVKRYLSIFGLSQQRIH-VDSVGSNDPYLSGTEPHVRLTNR 251 Query: 333 RIDILVED 340 R+ I + Sbjct: 252 RVTIELLQ 259 >gi|120555415|ref|YP_959766.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8] gi|120325264|gb|ABM19579.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8] Length = 309 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 12/110 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA--HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S+ + +L I + + E I + GH+D+ DN LS +RA Sbjct: 192 FASGSTSLSQADMNLLDNIVTYVMADSTVERIFVDGHSDSI---GSRIDNRALSEERANV 248 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-NRRIDILVEDRQG 343 + L G+ E + + A NRR I ++ RQG Sbjct: 249 VAEYLKSRGIDET-MLTVRAHGDQYPV----SRRPADNRRTTIRLQ-RQG 292 >gi|327405327|ref|YP_004346165.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327320835|gb|AEA45327.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 752 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 16/120 (13%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 Q N FD + P+ L KI EV+ V+ + HTD N +LS Sbjct: 619 QINPINFDLNKFTIRPDAAKELDKIVEVMNKYPYLVVELGAHTDCR---ASKAYNMKLSD 675 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-----------SDPMNSANRRIDILV 338 +RA ++ + + K + RI G+ RL S+ + NRR + V Sbjct: 676 NRAKASAEYIKKRITNPARIY-GKGYGESRLLNGCECEGTVKSDCSEEEHQKNRRTEFKV 734 >gi|281411904|ref|YP_003345983.1| OmpA/MotB domain protein [Thermotoga naphthophila RKU-10] gi|281373007|gb|ADA66569.1| OmpA/MotB domain protein [Thermotoga naphthophila RKU-10] Length = 288 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 11/118 (9%), Positives = 35/118 (29%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + + W Y+D +T+L+ FF+ + ++ + + + Sbjct: 3 KKRKEEQKSSPQWMTTYSDMVTLLLTFFVALISMSTISPGKFQQVAVGLRIALSGNPPSV 62 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 N + + +++ + L++ +F+ + S Sbjct: 63 LMGGKSINEEPLITSKRGIYQELMRLSEEYKGKITVEERDEGTLIVLKDMVFFETGSA 120 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVIS 267 + + E G LI + D F+ S+ E +L K+G++ + H+T V+ Sbjct: 90 EEYKGKITVEERDEGTLIVLKD---MVFFETGSAKLTVEAKELLAKVGQIVIEHTTNVLE 146 Query: 268 IRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 I G+ D +I NW LS RA S + + E R+ + Sbjct: 147 IYGYADDRLPLPNSIYVSNWHLSSARAASVVNFFLTE-LKEKRMIE 191 >gi|91217502|ref|ZP_01254461.1| OmpA/MotB family protein [Psychroflexus torquis ATCC 700755] gi|91184387|gb|EAS70771.1| OmpA/MotB family protein [Psychroflexus torquis ATCC 700755] Length = 235 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 54/166 (32%), Gaps = 11/166 (6%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 ++ K+ + + + ++ + E+ + + MF S Sbjct: 75 DKDTLQLKQEVVKIEDTSNPEIASKIDKIGESITNIESFKRILQEKKQLTPIGLMFTIDS 134 Query: 242 SIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + V+L E + + I G+T N LS R YS + L+ Sbjct: 135 KMINKSDFVLLDFYIEQYQALNKGYLLIEGYTCDL---GTKSHNLELSERRNYSVEKYLI 191 Query: 301 KSGVSEDRISKISGFA----HHRLKIASDPMNSANRRIDILVEDRQ 342 G+ +I + R I + NRR+++ + + + Sbjct: 192 AKGIPSSKIKT-KSYGEKFFERRPII--EESRIENRRVNLSIIESK 234 >gi|89073344|ref|ZP_01159868.1| Putative sodium-type flagellar protein MotY [Photobacterium sp. SKA34] gi|89050831|gb|EAR56305.1| Putative sodium-type flagellar protein MotY [Photobacterium sp. SKA34] Length = 285 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 18/155 (11%), Positives = 50/155 (32%), Gaps = 8/155 (5%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 +++ + L +S+ + + + I+ + ++S Sbjct: 131 QDWQRQNRSLEVGLSAVAFQKGYQSFSQCLSKLLPYGFEDIAFSVLH----YSENSDTLN 186 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L +I + + +S ++ + +S RA Q G+ Sbjct: 187 KISQQRLAQIADFVRYSDDIDLVLVAAFNDSISGTTES-QEMSERRAEKLRQYFQSLGLP 245 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 ++R+ ++ + R + NRR+ I + Sbjct: 246 DERV-QVEAYGKRRPIADNSTPMGRNLNRRVVISL 279 >gi|118577387|ref|YP_899627.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM 2379] gi|118504892|gb|ABL01374.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379] Length = 191 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 36/105 (34%), Gaps = 24/105 (22%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F S + L L + I I G T ++ N LS RA + Sbjct: 100 FTFDSHRLSKASKSQLNT----LDFKNKKIVIDGFTCTI---GRSKYNLSLSKKRARTVA 152 Query: 297 QVLMKSGVSEDRISKISGFAHH-----RLKIASDPMNSANRRIDI 336 L+ GVS + KISGF + NRR++I Sbjct: 153 DYLISKGVS---VLKISGFGESGKYKKKPL---------NRRVEI 185 >gi|285803774|pdb|3LDT|A Chain A, Crystal Structure Of An Outer Membrane Protein(Ompa)from Legionella Pneumophila Length = 169 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS L + +L + I + G TD +LS +A + Sbjct: 58 FXFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNV---GSRSHKRKLSQAQAETX 114 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 L +G++ R+ G+ + ++ NRRI+I Sbjct: 115 XTFLWANGIAAKRLKA-EGYGDKNAISDNAIIHGSAQNRRIEI 156 >gi|260890422|ref|ZP_05901685.1| fibronectin-binding protein [Leptotrichia hofstadii F0254] gi|260860042|gb|EEX74542.1| fibronectin-binding protein [Leptotrichia hofstadii F0254] Length = 149 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 10/110 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ ++ +++I L + I + GHTD++ + N +LS RA + Sbjct: 36 FNIDGNVLNESEASTIREIVNDLNKYGKSGTIDVIGHTDST---GSQKHNLKLSETRAKN 92 Query: 295 AYQVLMKSGVSEDRIS--KISGFAHHRLKIASDPMNSA--NRRIDILVED 340 +++ + G+ R S KI G + D + NRR++IL+ + Sbjct: 93 FARLMREFGLD-KRFSFGKIKGGGANSPVDTDDRVEGRYNNRRVEILLNN 141 >gi|254429094|ref|ZP_05042801.1| OmpA family protein [Alcanivorax sp. DG881] gi|196195263|gb|EDX90222.1| OmpA family protein [Alcanivorax sp. DG881] Length = 203 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 7/106 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + L+ VL +S++ TD + A N +L+ R Sbjct: 72 VYFGFDQNELADAEARRLESNLAVLKQYPTLQVSVQAFTDE---KGAASYNQKLAARRLD 128 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 Q L G+S RI +++ + ++ NRR++++ Sbjct: 129 RVVQYLRDGGISNGRIKRVA-LGEELPILPDANNEQRVINRRVELM 173 >gi|54307256|ref|YP_128276.1| hypothetical protein PBPRA0019 [Photobacterium profundum SS9] gi|46911676|emb|CAG18474.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 290 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 50/141 (35%), Gaps = 8/141 (5%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 +S + + K L +L + + + S++ + I E + Sbjct: 146 VISNVNFELPAKQFLSCKNDLILLNYQQVRSSEFYYPSGSTLVSKLDVRTAYGIAEYVKV 205 Query: 262 STEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + G++D+ + N R+S +RA +L++ GV ++ +I Sbjct: 206 IRSIKKVLIDGYSDSQ---GRSTVNLRISRERAEEVAALLIEFGV-PQKMIQIRSHGDRY 261 Query: 320 LKIAS--DPMNSANRRIDILV 338 + NRR+ + + Sbjct: 262 PIADNALADGRKKNRRVTVRL 282 >gi|296158506|ref|ZP_06841336.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] gi|295891074|gb|EFG70862.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] Length = 372 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 16/111 (14%) Query: 237 FDKSSSI-PLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAY 293 FD+ LP L ++ L +V SIR G+TD N +LS RA Sbjct: 237 FDRGDLAGMLPAGKAKLDELVRNLKQVDDVTSIRIDGYTDRL---GSDSYNRQLSAKRAE 293 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMNSA-------NRRIDI 336 + + L GVS G + +D + A NRR+++ Sbjct: 294 TVKRYLQSGGVSAP--ISARGRGKEDPVVQCNDRNHEALIACLGPNRRVEL 342 >gi|157962338|ref|YP_001502372.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC 700345] gi|157847338|gb|ABV87837.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345] Length = 249 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 57/182 (31%), Gaps = 26/182 (14%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 + L ++ + + L +L+ + L + + G+ + Sbjct: 76 HTQQTMLSEQEQQVVALNQENTSLVELSDQYEQAQQQLTTLKMAQEQKLTELALGLNVQ- 134 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287 F SS+ P L I ++ S E + + G+ D + N L Sbjct: 135 --------FKTGSSVIEPHFQQQLNDIAYAMSLSPELTLDLTGYADRR---GDSDYNQAL 183 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN-------RRIDILVED 340 S R L + GV E+R+ F M N RR+ + +++ Sbjct: 184 SEQRVAEVKNYLTEQGVEEERLHN-QAFGDSSPL-----MAEQNFENDFFDRRVTLKLQN 237 Query: 341 RQ 342 + Sbjct: 238 QN 239 >gi|89053189|ref|YP_508640.1| OmpA/MotB [Jannaschia sp. CCS1] gi|88862738|gb|ABD53615.1| OmpA/MotB [Jannaschia sp. CCS1] Length = 195 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 MF S+ LQ+ +I GHTD+ N RLS RA + Sbjct: 97 MFQSGSARLTGSGRQYLQQFFAG--AGAYAYAIYGHTDSR---ASDEYNMRLSERRAAAV 151 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 V G R+++ G+ R +D NRR++I+ Sbjct: 152 ANVARSVG---ARVAREIGYGERRPVAPNDSAANMQRNRRVEIV 192 >gi|114800514|ref|YP_760698.1| OmpA family protein [Hyphomonas neptunium ATCC 15444] gi|114740688|gb|ABI78813.1| OmpA family protein [Hyphomonas neptunium ATCC 15444] Length = 387 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 10/114 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV----ISIRGHTDASPFRNIARDNWR 286 Q F+ S + V+ + + ++I GHTD N R Sbjct: 275 QEFVVYFEWDRSDVTSQAAAVIDQAVANIRSVEGCAAGSVTIVGHTDT---SGNPDYNQR 331 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 LS+ RA L + G+ + + G L A+ NRR ++ + Sbjct: 332 LSVRRADVVAAALSERGI-ANTLITQDGKGETALAKATQDGVREPLNRRSEVTI 384 >gi|70731289|ref|YP_261030.1| OmpA family protein [Pseudomonas fluorescens Pf-5] gi|68345588|gb|AAY93194.1| OmpA family protein [Pseudomonas fluorescens Pf-5] Length = 460 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 11/132 (8%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---I 268 G + F++ S+ + L ++ + L ++ + Sbjct: 334 APGPQMPEAYQALTRQAQRLTVNFRFEEGSASLDNKARQDLNRVLDYLRQHGKMNRQVTL 393 Query: 269 RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN 328 G DA A LS RA + + L+KSGV +I GF A+ Sbjct: 394 AGFGDAKNDPARAAL---LSKLRAMAVRRELVKSGVV---FREIRGFGAELPVAANSADE 447 Query: 329 SA--NRRIDILV 338 NRR+++ V Sbjct: 448 GRIKNRRVEVWV 459 >gi|269219690|ref|ZP_06163544.1| OmpA family protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269210932|gb|EEZ77272.1| OmpA family protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 212 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 14/110 (12%) Query: 237 FDKSSSIPLPETIVVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ P VL + + + ISI GHTD+ N +LS DRA + Sbjct: 106 FEVDSANLTPRAREVLDGLVSKWRKKKPKEISITGHTDSV---ADDDHNQKLSEDRAKAV 162 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--------ASDPMNSANRRIDIL 337 + VS I ++ G ++ +ANRR+ I+ Sbjct: 163 RSY-VAPKVSGVSI-EVEGKGEKEPAASETNEDGSPNEAGKAANRRVVIV 210 >gi|242310688|ref|ZP_04809843.1| lipoprotein [Helicobacter pullorum MIT 98-5489] gi|239523086|gb|EEQ62952.1| lipoprotein [Helicobacter pullorum MIT 98-5489] Length = 172 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 48/153 (31%), Gaps = 14/153 (9%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-----IIDQRNTPMFDKSSSIPLPET 248 + ++ S + + I + + F+ P+ Sbjct: 20 SQKSGVDTSASQTQNMQNAQQGYVAGKDNFVNIEDRIQYVENGLQNIFFNFDQFSIRPDM 79 Query: 249 IVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + VL + + I G+TD N+ L L RA + L+ GVS Sbjct: 80 QNAVDNDANVLKDTAANPLTVRIEGNTDEW---GTDEYNYALGLKRAVAVKDALVARGVS 136 Query: 306 EDRISKISGFAHHRL--KIASDPMNSANRRIDI 336 E ++ +S + + + + NR++ Sbjct: 137 EGKMVLVS-YGESKPTCMEKTRECWAENRKVTF 168 >gi|28869933|ref|NP_792552.1| OmpA family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28853178|gb|AAO56247.1| OmpA family protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 451 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 11/108 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + S+ + L+++ E L + +++ G DA A LS RA Sbjct: 350 FAQGSARLDNKAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAAL---LSRLRAM 406 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + + L+KSGV+ I G +D + NRR+++ V+ Sbjct: 407 AVRRELIKSGVT---FRDILGLGDEMPVATNDIDDGRIKNRRVEVWVQ 451 >gi|258620793|ref|ZP_05715828.1| outer membrane protein [Vibrio mimicus VM573] gi|258586991|gb|EEW11705.1| outer membrane protein [Vibrio mimicus VM573] Length = 173 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 53/152 (34%), Gaps = 10/152 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETI 249 + ++S T + + + + D+++ + + + Sbjct: 25 TQVRGRLSETQVQHTNQILNESKQQVEVKHRSDLCTYDEQSQSLLLHYPFNKYQLSGPHQ 84 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +LQ ++ S I + GH D + + N LS RA + + L + +RI Sbjct: 85 EILQTYVSMV-DSQYKIVVEGHADQT---GNPKYNQALSERRAGAVTRYLRDTLKLGNRI 140 Query: 310 SKISGFAHHRLK--IASDPMNSANRRIDILVE 339 + GF + + NRR+ + ++ Sbjct: 141 VE-KGFGESAPVCTVQENAQTGCNRRVVLTIQ 171 >gi|283955187|ref|ZP_06372689.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 414] gi|283793400|gb|EFC32167.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 414] Length = 247 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 66/186 (35%), Gaps = 5/186 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ +W I+ T+ +A++ F T Sbjct: 3 KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTST 61 Query: 79 AS----KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + ++ + +++ +T+ ++ + + Q N + Sbjct: 62 QTVKEESKTQEKYKSTAKEESDELKSLKQMTMTQQETIKRLQAALDQSDNQIALNLPSKV 121 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + S ++ +D K + ++ + Y S + + ++ Sbjct: 122 EFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSILRSYELAYQRAENV 181 Query: 195 LAKKIS 200 L I Sbjct: 182 LKYFIE 187 Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 15/177 (8%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + + K K A + L+ L + + + + + Sbjct: 57 DYTSTQTVKEESKTQEKYKSTAKEESDELKSLKQMTMTQQETIKRLQAA----LDQSDNQ 112 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNI 280 I +++ + F++ S+ + I K L I IRG+TD S Sbjct: 113 IALNLPSKVE---FERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSILR 169 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + L+ RA + + ++ G + I I + + + P N R++I Sbjct: 170 SY---ELAYQRAENVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQTLENNRVEIY 221 >gi|260459525|ref|ZP_05807780.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075] gi|259035079|gb|EEW36335.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075] Length = 121 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 10/104 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-----HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 F S+ ++ I + L + I GHTDA + N LS R Sbjct: 12 FAFGSAAISSSQYGKIENIADALKRILRRDRGARVLIEGHTDAV---GSFQSNQVLSEQR 68 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 A S + L++ GV + + G+ L + + N NRR+ Sbjct: 69 AASLKRTLVREFGVPGHALETV-GYGEEFLLVPTQNENWQNRRV 111 >gi|258651985|ref|YP_003201141.1| OmpA/MotB domain-containing protein [Nakamurella multipartita DSM 44233] gi|258555210|gb|ACV78152.1| OmpA/MotB domain protein [Nakamurella multipartita DSM 44233] Length = 478 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 82/290 (28%), Gaps = 12/290 (4%) Query: 58 DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 D A + N + + ++ K D L Sbjct: 191 DATKVDAKTVSYGQTVINKIGSDLAYAGGTEADPARNKAKFQPFEDPTSKHRIDHLVDTE 250 Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + + + + + S +S + + + + + L Sbjct: 251 NDPFYGAEWDQATKSWANESPGRRVGASSTKTGVSTSATMDDTPEAPAPRAGKGDSELSF 310 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM- 236 S +L + KI + + K T + + +DQ Sbjct: 311 ESVPMVLETREPLGAILWGFKIEDKENAPIVLTGAKDADVTDTPSAAWGATMDQYYAAKY 370 Query: 237 ------FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 FD + L + L + + + G A+ A+ N LSL Sbjct: 371 AEILDDFDIGKADLKDAHKTQLDSVVTKLQGNAALRAQLG--GAADLTGGAKVNMALSLK 428 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 RA +A L+ G+ R+ ++ + ++A+ S NRR+ + V Sbjct: 429 RAENARDYLVSKGIDAARL-EVQSYGADWARVATTTGTNESKNRRVQVWV 477 >gi|148269399|ref|YP_001243859.1| OmpA/MotB domain-containing protein [Thermotoga petrophila RKU-1] gi|147734943|gb|ABQ46283.1| OmpA/MotB domain protein [Thermotoga petrophila RKU-1] Length = 288 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 11/118 (9%), Positives = 35/118 (29%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS 80 + + W Y+D +T+L+ FF+ + ++ + + + Sbjct: 3 KKRKEEQKSSPQWMTTYSDMVTLLLTFFVALISMSTISPGKFQQVAVGLRIALSGNPPSV 62 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 N + + +++ + L++ +F+ + S Sbjct: 63 LMGGKSINEEPLITSKRGIYQELMRLSEEYKGKITVEERDEGTLIVLKDMVFFETGSA 120 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVIS 267 + + E G LI + D F+ S+ E +L K+G++ + H+T V+ Sbjct: 90 EEYKGKITVEERDEGTLIVLKD---MVFFETGSAKLTVEAKELLAKVGQIVIEHTTNVLE 146 Query: 268 IRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 I G+ D +I NW LS RA S + + E R+ + Sbjct: 147 IYGYADDRLPLPNSIYVSNWHLSSARAASVVNFFLTE-LREKRMIE 191 >gi|330965346|gb|EGH65606.1| OmpA family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 451 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 11/108 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + S+ + L+++ E L + +++ G DA A LS RA Sbjct: 350 FAQGSARLDNKAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAAL---LSRLRAM 406 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + + L+KSGV+ I G +D + NRR+++ V+ Sbjct: 407 AVRRELIKSGVT---FRDILGLGDEMPVATNDIDDGRIKNRRVEVWVQ 451 >gi|190571199|ref|YP_001975557.1| peptidoglycan-associated lipoprotein, putative [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018599|ref|ZP_03334407.1| peptidoglycan-associated lipoprotein, putative [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357471|emb|CAQ54905.1| peptidoglycan-associated lipoprotein, putative [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995550|gb|EEB56190.1| peptidoglycan-associated lipoprotein, putative [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 159 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 17/136 (12%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270 KGV ++ I D+R F S + L + EVL ++ + +++ G Sbjct: 23 KKGVNTTNKMNAVVKQIGDKR--VFFGYDESSISEVSADALLDVMEVLQNNPDAKVTLTG 80 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK--IASDP- 326 HTD N L RA +A + ++ + E+RI S + D Sbjct: 81 HTDNR---GSHEYNLALGARRADAAKKFMVSCTPYLENRIKTAS-KGETEPLVNVKDDSR 136 Query: 327 ------MNSANRRIDI 336 ++ NRR++ Sbjct: 137 NSKYEKEHAKNRRVEF 152 >gi|212693934|ref|ZP_03302062.1| hypothetical protein BACDOR_03458 [Bacteroides dorei DSM 17855] gi|237723935|ref|ZP_04554416.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265751214|ref|ZP_06087277.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212663466|gb|EEB24040.1| hypothetical protein BACDOR_03458 [Bacteroides dorei DSM 17855] gi|229437761|gb|EEO47838.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|263238110|gb|EEZ23560.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 401 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 5/90 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWR 286 + D N F+ + P+ ++ +I + +L +++ I G TDA + ++ N Sbjct: 280 LCDLFNNIYFEFDKTEITPKAATIIDEIAQIMLTDTSKKYLITGCTDA---KGSSQYNME 336 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 LS RA + L+K GV +++ K G Sbjct: 337 LSQKRADAVVNALIKKGV-PNKMLKAKGVG 365 >gi|149908775|ref|ZP_01897435.1| hypothetical protein PE36_21279 [Moritella sp. PE36] gi|149808049|gb|EDM67990.1| hypothetical protein PE36_21279 [Moritella sp. PE36] Length = 284 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 53/153 (34%), Gaps = 8/153 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D+ + S G V D + + + + + D+ + + Sbjct: 137 DDIHAVLPSVNLGDVFDGYYQCLRDISPFSYEQVR--DRNLYYSGGSYLLNTQQKQEMAA 194 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 L + I GH+++ +N LS RA Y LM++G+S ++ ++ Sbjct: 195 IVKYISLDGLVTKVLIDGHSNSI---GNTVNNLLLSQQRADDVYMYLMEAGIS-TKLMEV 250 Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 + + NRR+++ + R G Sbjct: 251 RSHGDRYPLKSDRTASGREKNRRVNLRIIRRLG 283 >gi|291562029|emb|CBL40845.1| Flagellar motor protein [butyrate-producing bacterium SS3/4] Length = 313 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 15/192 (7%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 ++I P K + ++ + K+ T++ + VK Sbjct: 54 QNQGSENITINSQMSDTPEVDSKGQEIGQEDLQAEDVNKLYLTIAESLNQAGVKEATVIR 113 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASP 276 +S N F +SS+ E VL + +A + ++I HT Sbjct: 114 GDDYTYVSF---ANNVFFGANSSVLTREGQAVLYTFAKAIAPAAGGIEQVNIMSHTAKVT 170 Query: 277 FRNIARD-----NWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSA 330 + + LS R+ L + + +++ IS + +R + Sbjct: 171 DNSQINPQIIRKDRILSAMRSAEVCIYLQQQNVIKPEKLVDIS-YGEYRPIADNSTEEGR 229 Query: 331 --NRRIDILVED 340 NRRI+ L+ D Sbjct: 230 IKNRRIEFLLLD 241 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 30/82 (36%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 + ++ G+W Y D +T+L+ FF++++ ++ D + Sbjct: 3 KKNRPTDSGGNWMDTYGDMVTLLLTFFIMLYSMSNLDAQKWTIFVKSIPNIQNQGSENIT 62 Query: 82 GIFDEQNPPERSSQNKIDLSID 103 + PE S+ + D Sbjct: 63 INSQMSDTPEVDSKGQEIGQED 84 >gi|153006246|ref|YP_001380571.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152029819|gb|ABS27587.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5] Length = 274 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 8/107 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + ++ LQK+ + L + + +G+ D A+ N L RA SA Sbjct: 173 FGFDQANLTADSQGTLQKLADCLKATPAKRVVAQGYADER---GTAQYNVALGNRRAESA 229 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + L GV ++ F + NRR++ VE Sbjct: 230 RKYLEDLGVGGK--TETVSFGEENALCSEATESCWEQNRRVEFQVER 274 >gi|239908713|ref|YP_002955455.1| hypothetical protein DMR_40780 [Desulfovibrio magneticus RS-1] gi|239798580|dbj|BAH77569.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 1002 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNI----ARDNWRLSLDR 291 F P+ + + + L + + + G+TD S R N LS R Sbjct: 894 FSSEQGSVPPDAAGQIAEAAQRLKAAGVGSVLVIGYTDNSRLRRALLRQYGTNAVLSQAR 953 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 A S + L+K+G+ ++ +I GF +D NRR++I+ Sbjct: 954 AASVAEGLVKNGIDAGKV-QIHGFGSAMPVSPNDTPFNREKNRRVEII 1000 >gi|329902808|ref|ZP_08273256.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium IMCC9480] gi|327548603|gb|EGF33260.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium IMCC9480] Length = 392 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 16/114 (14%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + L + +S+ G+TD + N LS RA + Sbjct: 281 FAFGQATLTAAGKTQLDMLITAANAGGYGSVSVDGYTDQI---GSDKVNLALSTARATTI 337 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI-----ASDPMNSA------NRRIDILV 338 L+ G+S +I + +G LK+ A + NRR+D+ + Sbjct: 338 RDYLLAHGLSALQI-RATGHGATSLKVELAQCAGSTGAALQTCLAPNRRVDVTL 390 >gi|294782985|ref|ZP_06748310.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA] gi|294480677|gb|EFG28453.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA] Length = 141 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 3/119 (2%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 +Q L + + +K + ++I+ FD S+ P+ Sbjct: 25 AVQALTTTQMRENTIRINALEIKNIDITNIEAPKEMTIVLDERALNFDFDKSVVKPQYFE 84 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +L + + + + ++I GHTD+ + N LS RA + L++ G+ EDRI Sbjct: 85 MLNNLKDFIEQNNYELTIEGHTDSV---GSNQYNIGLSRRRAEAVKAKLIEFGLPEDRI 140 >gi|170722232|ref|YP_001749920.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619] gi|169760235|gb|ACA73551.1| OmpA/MotB domain protein [Pseudomonas putida W619] Length = 435 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 22/200 (11%), Positives = 56/200 (28%), Gaps = 13/200 (6%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 + +++ + Y + + + A Sbjct: 241 EGDAPAMLPDRPLVASEDYPLSRRLYFYLPANAKSQAKALAEFAQSPAGQAIVAEQGFVS 300 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDK--SSSIPLPETIVVLQKIGEVLAH-- 261 ++ + ++ QR + F S+ + + +++ + L Sbjct: 301 QQIKSLAIPAQVDMPPRYRNLAQKAQRLSVNFRFQEGSASLDNKALRDTKRVADYLRQAG 360 Query: 262 -STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + G D A LS RA + + L + GV + +++G Sbjct: 361 KLQNKAVLVGFGDPKETPGRAAL---LSRLRAQAVRRELARDGVE---VLEVTGMGDELP 414 Query: 321 KIASDPMNS--ANRRIDILV 338 ++ NRR+++ V Sbjct: 415 VAGNELEQGRLRNRRVEVWV 434 >gi|302186190|ref|ZP_07262863.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642] Length = 447 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 55/173 (31%), Gaps = 11/173 (6%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + ++ + Q++ + + + + Sbjct: 281 PSSAHQRWAQALIRFAQSAEGQEIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 340 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288 F + S+ + L+++ + L +++ G DA A LS Sbjct: 341 SVNFRFAQGSARLDNKAQQDLKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAAL---LS 397 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 RA + + L+KSGV+ I G +D + NRR+++ V+ Sbjct: 398 RLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447 >gi|167855462|ref|ZP_02478226.1| lipoprotein Plp4 [Haemophilus parasuis 29755] gi|167853391|gb|EDS24641.1| lipoprotein Plp4 [Haemophilus parasuis 29755] Length = 281 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 14/114 (12%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD I + V+ + E L S E + + G+ D N LS R Sbjct: 140 GDFLFDFDKDILTTKGREVVDNVAEQLKSSGAEKVKLVGYADRL---GSEEYNLDLSQRR 196 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDIL 337 A L++ G+ + G+ A D + NRR++I Sbjct: 197 ANMVKARLVEQGIKVP--IEAVGYGKANQVKACDGESGQALRDCLRPNRRVEIT 248 >gi|66045711|ref|YP_235552.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] gi|63256418|gb|AAY37514.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a] Length = 447 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 53/173 (30%), Gaps = 11/173 (6%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 P + ++ + Q + + + + + Sbjct: 281 PTSTPQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 340 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288 F + S+ + L+++ + L +++ G DA A LS Sbjct: 341 SVNFRFAQGSARLDNKAQQDLKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAAL---LS 397 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 RA + + L+K GV+ I G + D NRR+++ V+ Sbjct: 398 RLRAMAVRRELLKRGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447 >gi|226939541|ref|YP_002794614.1| RmpM [Laribacter hongkongensis HLHK9] gi|226714467|gb|ACO73605.1| RmpM [Laribacter hongkongensis HLHK9] Length = 210 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 29/128 (22%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDR 291 +F S PE L + + + + + G+TD + + N LS R Sbjct: 92 VLFGFDKSTVTPEGKQALVDVANKIKSKGAKLQGVEVLGYTD---YIGTEKYNMALSERR 148 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA-----------------NRRI 334 A + VL++ G +I+ G +D +RR+ Sbjct: 149 AAAVKNVLVEMGADPAKITSA-GRGEL-----NDKTAQECRAKKQSYKQLKACLAPDRRV 202 Query: 335 DILVEDRQ 342 D+ + +Q Sbjct: 203 DVEITAQQ 210 >gi|186682639|ref|YP_001865835.1| OmpA/MotB domain-containing protein [Nostoc punctiforme PCC 73102] gi|186465091|gb|ACC80892.1| OmpA/MotB domain protein [Nostoc punctiforme PCC 73102] Length = 657 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 32/281 (11%), Positives = 68/281 (24%), Gaps = 11/281 (3%) Query: 63 KAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 +++ + A+ G+ + + S Sbjct: 360 QSLPAASGASLRTTADATTGVEGGYFTDALHNDAPAHGGTGTNAPAGSALPAQYPFGNDP 419 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 +S + R + E N+ ++K + Sbjct: 420 AQPNPATPGLSRPSSSGASGATIGYKRSDDPTDIKAAELTDAPGGAGEFNFDFQTVAKGE 479 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + + + + F+ + + FD S Sbjct: 480 DTMTTYGALHWGFQIRAGKVENDRASAQDGQSATFDAALQKHQDFYVHEPVIFYFDFDSD 539 Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + + L + ++ G D + N LSL RA + L Sbjct: 540 QLSSSETGKIDTFLDYLRRFPDVKVTPEGFADRR--GGASGHNLDLSLRRAQAVGAALRA 597 Query: 302 SGVSEDRISKIS-GFAHHR---LKIAS--DPMNSA--NRRI 334 GV+E +IS ++ G + D + NRR+ Sbjct: 598 KGVAEAQISAVTIGSGSTEDFTPDATTNQDTEANRRGNRRV 638 >gi|254512328|ref|ZP_05124395.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11] gi|221536039|gb|EEE39027.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11] Length = 515 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 58/154 (37%), Gaps = 12/154 (7%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + LA IS+ + + + + + + + + +S F+ SS P ++ Sbjct: 369 QGDRLANAISTGGTEVGLEELQRMIETLRPLSRLSLSFR-------FEPGSSHPDAQSRS 421 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL---MKSGVSED 307 + ++ + L + T S S A N R++L RA + + +++ + + Sbjct: 422 NILQLAQALENGTLDASHLAFVGFSDGDGAAASNTRIALRRARTVRNAVLGAVETSIPDS 481 Query: 308 RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + GF D NRR+++ V Sbjct: 482 IEITVEGFGEAMPMACDDTEWGRKVNRRVEVWVR 515 >gi|77360808|ref|YP_340383.1| required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA [Pseudoalteromonas haloplanktis TAC125] gi|76875719|emb|CAI86940.1| required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA [Pseudoalteromonas haloplanktis TAC125] Length = 180 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 Q FD + + +L+ E L ++ V I GH D N L Sbjct: 74 QEQVIYFDFDKATVEGKYADLLRAHAEFLVQNSSVKVLIEGHADER---GTPEYNIALGE 130 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 R + + L GVS ++ + + + + S + + NRR ++ Sbjct: 131 HRGQAVEKYLQSLGVSASQM-SVVSYGEEKPMVKSRTESAFAKNRRAVLV 179 >gi|170751934|ref|YP_001758194.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170658456|gb|ACB27511.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831] Length = 348 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 11/154 (7%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPET 248 + + + T +V + + + + NT FD S P+ Sbjct: 174 AQADEAEVYEALTAPPVVQVDRRYTLDQIRYSPDLRARLRSVDINTITFDTGSFTVTPDQ 233 Query: 249 IVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302 L I + EV I G TDA A DN LS RA + VL + Sbjct: 234 AAKLSGIAGAMNRAIQANPREVFLIEGFTDAV---GSALDNLSLSDRRAQAVATVLTEQF 290 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 V + ++ G+ LK+ + + NRR+ + Sbjct: 291 RVPPENLTT-QGYGEQYLKVNTQGPSRENRRVVV 323 >gi|317014512|gb|ADU81948.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori Gambia94/24] Length = 179 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 67 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K NRR+D+ + Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCVQKTRECYRENRRVDVKL 177 >gi|317480796|ref|ZP_07939881.1| OmpA family protein [Bacteroides sp. 4_1_36] gi|316903039|gb|EFV24908.1| OmpA family protein [Bacteroides sp. 4_1_36] Length = 416 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279 + D F+ + + +L ++ +L + + I G+TDA Sbjct: 285 PVMVDTVFCDLLENIHFEFDKDVITLVSHKILDRLAALLKNYPDSHFLITGYTDAR---G 341 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 A+ N RLS RA + Y+ L++ GV + K GF + + P+ + N R Sbjct: 342 SAQYNLRLSERRAKAVYKALLERGV-PSHMLKWRGFGNRAALVP--PVAADNIR 392 >gi|148862|gb|AAA24941.1| 31 kDa antigen [Histophilus somni] Length = 273 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 14/110 (12%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD + + + L + + I I G TD N LS RA Sbjct: 141 LFDFDQDTLTSKGEEAVDNVAMQLEAFSAKEIKIVGFTDRL---GTDSYNLDLSQRRADR 197 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSA-------NRRIDI 336 + L++ G++ D I I G+ + +D NRR++I Sbjct: 198 VKERLIEKGLNID-IIAI-GYGKTQQIKACNDVPAKELKDCLRPNRRVEI 245 >gi|113460985|ref|YP_719052.1| outer membrane protein [Haemophilus somnus 129PT] gi|170717551|ref|YP_001784639.1| SmpA/OmlA domain-containing protein [Haemophilus somnus 2336] gi|112823028|gb|ABI25117.1| outer membrane protein [Haemophilus somnus 129PT] gi|168825680|gb|ACA31051.1| SmpA/OmlA domain protein [Haemophilus somnus 2336] Length = 273 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 14/110 (12%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +FD + + + L + + I I G TD N LS RA Sbjct: 141 LFDFDQDTLTSKGEEAVDNVAMQLEAFSAKEIKIVGFTDRL---GTDSYNLDLSQRRADR 197 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSA-------NRRIDI 336 + L++ G++ D I I G+ + +D NRR++I Sbjct: 198 VKERLIEKGLNID-IIAI-GYGKTQQIKACNDVPAKELKDCLRPNRRVEI 245 >gi|329901809|ref|ZP_08272908.1| outer membrane protein, OmpA family [Oxalobacteraceae bacterium IMCC9480] gi|327549018|gb|EGF33629.1| outer membrane protein, OmpA family [Oxalobacteraceae bacterium IMCC9480] Length = 396 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 16/114 (14%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S + L + + ++I G+TD A +N LS RA +A Sbjct: 285 FAFGRSTLTAAGMQQLDALIISARAGNYSAVAITGYTDQI---GSAAENLALSQARARTA 341 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI-----ASDPMNSA------NRRIDILV 338 Q ++ G+ DR +G LK+ + + NRR+++ + Sbjct: 342 RQYMIAHGL-TDRAITATGAGATNLKVELAQCSGKTGAALQACLADNRRVEVTL 394 >gi|219870536|ref|YP_002474911.1| lipoprotein Plp4/outer membrane protein and related peptidoglycan-associated (lipo)proteins [Haemophilus parasuis SH0165] gi|219690740|gb|ACL31963.1| lipoprotein Plp4/outer membrane protein and related peptidoglycan-associated (lipo)proteins [Haemophilus parasuis SH0165] Length = 281 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 14/114 (12%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD I + V+ + E L S E + + G+ D N LS R Sbjct: 140 GDFLFDFDKDILTTKGREVVDDVAEQLKSSGAEKVKLVGYADRL---GSEEYNLDLSQRR 196 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDIL 337 A L++ G+ + G+ A D + NRR++I Sbjct: 197 ANMVKARLVEQGIKVP--IEAVGYGKANQVKACDGESGQALRDCLRPNRRVEIT 248 >gi|307823678|ref|ZP_07653906.1| peptidoglycan-associated lipoprotein [Methylobacter tundripaludum SV96] gi|307734972|gb|EFO05821.1| peptidoglycan-associated lipoprotein [Methylobacter tundripaludum SV96] Length = 191 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 43/114 (37%), Gaps = 7/114 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 ++T F SS + + V+ + L + GH D N L Sbjct: 82 SKSTIYFMLDSSQVQDDFVPVIAAHAQYLVAHPGQRVVMEGHGDER---GSREYNIALGE 138 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDR 341 RA S ++ GV++ ++ ++ + + + NRR++++ + + Sbjct: 139 QRAKSIASMMKVQGVADGQL-EVVSYGEEKPASLGHDEASWELNRRVELVYQGK 191 >gi|300313508|ref|YP_003777600.1| hypothetical protein Hsero_4223 [Herbaspirillum seropedicae SmR1] gi|300076293|gb|ADJ65692.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 161 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 16/120 (13%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNI------- 280 F + S+ E ++ E +A I + GHTD P + Sbjct: 33 KEGAFRRGSACVESEAKAAFAQVEERIAEYLQQNPAGRIYVEGHTDDKPVKAPVTDVRAF 92 Query: 281 ---ARDNWRLSLDRAYSAYQVLMKSGVS-EDRISKISGFAHHRLKIASDPMNSANRRIDI 336 DN LS RA A +L+ R ++G+ + + NRR+++ Sbjct: 93 CTVYDDNITLSAARARQARLLLVGRSSPEAARRVIVAGYGDSQPLPGLAASDERNRRVEV 152 >gi|262173884|ref|ZP_06041561.1| outer membrane protein [Vibrio mimicus MB-451] gi|261891242|gb|EEY37229.1| outer membrane protein [Vibrio mimicus MB-451] Length = 189 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 + + VLQ ++ S I + GH D + + N LS RA + Sbjct: 88 YPFNKYQLSGPHQEVLQTYVSMV-DSQYKIVVEGHADQT---GNPKYNQALSERRAGAVT 143 Query: 297 QVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVE 339 + L + +RI + GF + + NRR+ + ++ Sbjct: 144 RYLRDTLKLGNRIVE-KGFGESAPVCTVQENAQTGCNRRVVLTIQ 187 >gi|313905138|ref|ZP_07838507.1| OmpA/MotB domain protein [Eubacterium cellulosolvens 6] gi|313470041|gb|EFR65374.1| OmpA/MotB domain protein [Eubacterium cellulosolvens 6] Length = 293 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 9/120 (7%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIA-- 281 + I+ +N F+ SS L VL I+I GHT A+ Sbjct: 124 TFIEFKNKAFFEGDSSALTASGRQALDIFCAVLAPEKDQVSQINIMGHTAAAQSAKTDSI 183 Query: 282 RDNWRLSLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 R + L+ RA + + + ++ + + +R + NRR++IL+ Sbjct: 184 RGDRMLASMRAAEVLVFIQEKNVIEPAKLVSME-YGEYRPIADNSTEEGRAANRRVEILL 242 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 24/192 (12%), Positives = 54/192 (28%) Query: 33 WKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 W Y D +T+LM FF++++ +++ D + + P + S + + Sbjct: 16 WMDTYGDLVTLLMTFFVLLYSMSSLDQSKWELFVKSIYPGMTDSDKDSAEMKLDAQVVST 75 Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 SS I + D+ +Q + +S + + E Sbjct: 76 SSVENIVAGESTMPENSVDDVNSLYIMFAQQMDAAGISDVQVSRGKDYTFIEFKNKAFFE 135 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 ++ + +I M Q L + Sbjct: 136 GDSSALTASGRQALDIFCAVLAPEKDQVSQINIMGHTAAAQSAKTDSIRGDRMLASMRAA 195 Query: 213 KGVLFETTRTGI 224 + ++F + I Sbjct: 196 EVLVFIQEKNVI 207 >gi|194295646|gb|ACF40850.1| outer membrane protein [Riemerella anatipestifer] gi|194295648|gb|ACF40851.1| outer membrane protein [Riemerella anatipestifer] gi|194295650|gb|ACF40852.1| outer membrane protein [Riemerella anatipestifer] gi|194295654|gb|ACF40854.1| outer membrane protein [Riemerella anatipestifer] Length = 270 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 63/248 (25%), Gaps = 21/248 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + + ++N Sbjct: 42 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPEFQGCPDTDGDGVPDKDDNCP 101 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 102 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 145 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 146 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 205 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 206 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 262 Query: 312 ISGFAHHR 319 G Sbjct: 263 -KGVGSAE 269 >gi|144900188|emb|CAM77052.1| conserved hypothetical protein, secreted [Magnetospirillum gryphiswaldense MSR-1] Length = 196 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 9/146 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQR--NTPMFDKSSSIPLPETIVVLQKIG 256 I+S + + T L ++ D+ F ++ LPE ++ + Sbjct: 55 IASAGEKPSPAKPLDEARIKQTWADALAAMPDRPVTFQLYFSSGTADLLPEAAELVVQAV 114 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 ++ I I GH DA N R+S RA ++++ G+ I S Sbjct: 115 DLAKKRPHVFIMIAGHADAV---GSDEVNDRISRRRAEVVRNLVVERGLPPRAIVA-SSH 170 Query: 316 AHHRLKIASDP--MNSANRRIDILVE 339 + + NRR+ + ++ Sbjct: 171 GKRNPLVPTKDGVAEPRNRRVTLTLQ 196 >gi|91777230|ref|YP_552438.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans LB400] gi|91689890|gb|ABE33088.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans LB400] Length = 372 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 17/195 (8%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + + ++ E + + KRL D +K ++ + Sbjct: 154 TSPLFPQCQEAQRLTACSEVELIHAGHEAWTRDFDESKRLVDGVEKGMPGVAAALEACTP 213 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSI-PLPETIVVLQKIGEVLAHSTEVISIR-- 269 V +++ FD+ LP L ++ L + +V SIR Sbjct: 214 PPVAATVPAVPQKMTLQADATFR-FDRGDLAGMLPAGKAKLDELVRNLKQADDVTSIRID 272 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SDPMN 328 G+TD N +LS RA + + L+ GV+ G + +D Sbjct: 273 GYTDRL---GSDSYNRQLSAKRAETVKRYLLSGGVTAP--ISARGRGKEDPVVQCNDHNR 327 Query: 329 -------SANRRIDI 336 + NRR+++ Sbjct: 328 EALIACLAPNRRVEL 342 >gi|323493924|ref|ZP_08099041.1| Outer membrane protein [Vibrio brasiliensis LMG 20546] gi|323311865|gb|EGA65012.1| Outer membrane protein [Vibrio brasiliensis LMG 20546] Length = 188 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 50/153 (32%), Gaps = 10/153 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETI 249 ++ ++ + + G + + D+ + + P Sbjct: 41 TQVSGHLTQREAKSENTLLNSGRDVVHSEAEDDVCFYDKETQSLVLNYGIDIYKLSPNHK 100 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 VL++ L ++T I I GH D+ N LS RA + L +RI Sbjct: 101 QVLEQYLG-LVNNTAKIYIEGHADSL---GSEGYNKALSARRANQVAKYLKSDLKQGNRI 156 Query: 310 SKISGFAHHRLK--IASDPMNSANRRIDILVED 340 + + + + + NRR+ I V+ Sbjct: 157 VEHA-YGESSPICNLTQNSATGCNRRVVITVKS 188 >gi|261417437|ref|YP_003251120.1| hypothetical protein Fisuc_3058 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373893|gb|ACX76638.1| conserved hypothetical protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327827|gb|ADL27028.1| conserved hypothetical protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 243 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 66/192 (34%), Gaps = 31/192 (16%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG-VLFETTRTGIL-ISIIDQRNT 234 ++K+ + + + QD +I L D++ ++ + I Sbjct: 43 QITKQDNIKKQAINKYQDTRDEIYKELKSTFKDSLNVWGAELDSATLTVRFNEIALDGTP 102 Query: 235 PMFDKSSSIPLPETIVVLQKIG---------EVLAHSTEVISIRGHTDASPFRN------ 279 +F ++ P +++ E E I I GHTD++P + Sbjct: 103 VLFASGDTLLPPRYKSMMKFFFPKYLEILDGEKFREHIEEIRIEGHTDSTPCYSLCKTLE 162 Query: 280 -IARDNWRLSLDRAYSAYQV-LMKSGVS--------EDRISKISGFAHHRLKIASDPMNS 329 N LS R+ + + L ++ VS + +G + + + + Sbjct: 163 RNYLYNMNLSQARSRNVLRYGLTETDVSKDTTLLEFARKYIIATGLSFSQPRATQE---- 218 Query: 330 ANRRIDILVEDR 341 +RR++I V + Sbjct: 219 KSRRVEIRVRTK 230 >gi|206891094|ref|YP_002249885.1| peptidoglycan-associated lipoprotein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743032|gb|ACI22089.1| peptidoglycan-associated lipoprotein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 182 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 7/117 (5%) Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278 ++ + ++ FD + + L+K+ L + + I GH D Sbjct: 60 QMAELIKKLQEEIGDIHFDYDKYDVRQDDLPTLKKVASYLQKYPKLRVIIEGHCDER--- 116 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRR 333 N+ L RA SA Q L+ G+ RI IS + + ++ NRR Sbjct: 117 GTNEYNFALGQKRADSAKQYLITLGIISSRIDIIS-YGEEKPLCTEQNESCWQKNRR 172 >gi|94967622|ref|YP_589670.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter versatilis Ellin345] gi|94549672|gb|ABF39596.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter versatilis Ellin345] Length = 241 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%) Query: 226 ISIIDQRNTP------MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR 278 IS+ DQ+ +D + VLQ +I GH D Sbjct: 122 ISLSDQQAFAKYVKDIYYDYDAYTVRAADQAVLQANANFFKQHPNIHFTIEGHCDER--- 178 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336 N L +RA +A ++++G+ + IS + + +++ NRR Sbjct: 179 GSTEYNLALGDNRASAAKNAIVQAGIPASSVRTIS-YGKEKPFCTESNEQCWQQNRRAHF 237 Query: 337 LV 338 ++ Sbjct: 238 VI 239 >gi|213967029|ref|ZP_03395179.1| OmpA family protein [Pseudomonas syringae pv. tomato T1] gi|301385214|ref|ZP_07233632.1| OmpA family protein [Pseudomonas syringae pv. tomato Max13] gi|302059607|ref|ZP_07251148.1| OmpA family protein [Pseudomonas syringae pv. tomato K40] gi|302130155|ref|ZP_07256145.1| OmpA family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928351|gb|EEB61896.1| OmpA family protein [Pseudomonas syringae pv. tomato T1] Length = 447 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 11/108 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + S+ + L+++ E L + +++ G DA A LS RA Sbjct: 346 FAQGSAKLDNKAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAAL---LSRLRAM 402 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + + L+KSGV+ I G +D + NRR+++ V+ Sbjct: 403 AVRRELIKSGVT---FRDILGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447 >gi|218676259|ref|YP_002395078.1| Outer membrane protein [Vibrio splendidus LGP32] gi|218324527|emb|CAV26009.1| Outer membrane protein [Vibrio splendidus LGP32] Length = 188 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 43/147 (29%), Gaps = 10/147 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKI 255 + + + + + D+ + + + + VL + Sbjct: 47 LIKLDEKPQNEVLNRESEVIQIAAQDDVCFYDKATQSLVLNYPTNVYLLDENHKQVLGQY 106 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L I I GH D+ N LS RA L K +RI + + + Sbjct: 107 LS-LVGDKSKIYIEGHADSL---GSKSYNKALSSRRAGQVASYLKKDLHQGNRIVEYA-Y 161 Query: 316 AHHRLK--IASDPMNSANRRIDILVED 340 + + NRR+ I V+ Sbjct: 162 GESAPICKVTDNKATGCNRRVVITVKS 188 >gi|86144308|ref|ZP_01062640.1| hypothetical protein MED222_07863 [Vibrio sp. MED222] gi|85837207|gb|EAQ55319.1| hypothetical protein MED222_07863 [Vibrio sp. MED222] Length = 182 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 43/147 (29%), Gaps = 10/147 (6%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKI 255 + + + + + D+ + + + + VL + Sbjct: 41 LIKLDEKPQNEVLNRESEVIQIAAQDDVCFYDKATQSLVLNYPTNVYLLDENHKQVLGQY 100 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 L I I GH D+ N LS RA L K +RI + + + Sbjct: 101 LS-LVGDKSKIYIEGHADSL---GSKSYNKALSSRRAGQVASYLKKDLHQGNRIVEYA-Y 155 Query: 316 AHHRLK--IASDPMNSANRRIDILVED 340 + + NRR+ I V+ Sbjct: 156 GESAPICKVTDNKATGCNRRVVITVKS 182 >gi|312892475|ref|ZP_07751968.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] gi|311295055|gb|EFQ72231.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] Length = 724 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 13/121 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 +D S P+ L + +L + + H D N LS Sbjct: 591 SIGKIYYDLDKSFIRPDAEGALNHLINLLNSYPGLKVIVASHCDTR---ASIDYNIGLSQ 647 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVEDRQ 342 R+ SA L+ GVSE+RI ++ F RL ++ + NRR + ++ + Sbjct: 648 RRSLSARAYLLAHGVSENRI-QMEYFGKSRLANKCADGVPCTEADHQLNRRTEFVLL-KN 705 Query: 343 G 343 G Sbjct: 706 G 706 >gi|146307460|ref|YP_001187925.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp] gi|145575661|gb|ABP85193.1| phosphate ABC transporter substrate-binding protein, PhoT family [Pseudomonas mendocina ymp] Length = 460 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 33/293 (11%), Positives = 73/293 (24%), Gaps = 16/293 (5%) Query: 51 MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNS 110 ++ +D + ++ + + F E E T+ S Sbjct: 178 LFSGQISDWSALGGRPGAVRQYARDDNSGTYDTFKELVLAPGGRSLAGTAQRFESSTQLS 237 Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 + ++ + T + Sbjct: 238 DAVAGDPNGIGFIGLPYIRQAKAVAIAAGDSQPMPPSTTLIATEDYPLSRR-----LFIY 292 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 L ++ R Q + + A + + Sbjct: 293 NQPQLDNPWARALIDFAHSPRGQAIVDSTGFIAQTVQAVQVAPDAQLPADYRQLAEQAQR 352 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRL 287 F + S+ + LQ++ + L + + G DA A L Sbjct: 353 LSVNFRFQEGSATLDNKAQRDLQRVMDYLRQHDKLQGKVVLVGFGDAKSDPERAEL---L 409 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 S RA + + L + GV +++G A++ + NRR+++ V Sbjct: 410 SKLRAMAVRRELARQGVL---FREVTGLGGELPVAANNEEHGRIRNRRVEVWV 459 >gi|312961581|ref|ZP_07776081.1| OmpA domain protein [Pseudomonas fluorescens WH6] gi|311284164|gb|EFQ62745.1| OmpA domain protein [Pseudomonas fluorescens WH6] Length = 306 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 48/171 (28%), Gaps = 15/171 (8%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + ++ L + + + T + Sbjct: 136 PQPVNRAEAERELATSRTQAHAVSRASTVEACRHYDYLVDTSRFKRYELSGDVVFNFGKS 195 Query: 240 SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 L ++ L H + + + GHTD N +L RA + Sbjct: 196 GPQDISAAGHKALAQLITALQHDDAQIKQMQVVGHTDPI---GDEAANQQLGQRRADTLR 252 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKI----ASDPMN----SANRRIDILVE 339 +L+ G+ E I S + + + + NRR+ + VE Sbjct: 253 SLLIAKGIPES-IISASSAGNREPVVYSCYGNREQRIACYAPNRRVVVTVE 302 >gi|304312855|ref|YP_003812453.1| Outer membrane protein [gamma proteobacterium HdN1] gi|301798588|emb|CBL46818.1| Outer membrane protein [gamma proteobacterium HdN1] Length = 285 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 6/94 (6%) Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + + L + L I + GH+D NW +S RA + + L+ GV Sbjct: 191 KAQARLDLIAGYQKLDAGIRKIFVDGHSDTM---GRLGHNWEVSRLRANAVREYLIAKGV 247 Query: 305 SEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 E+ + + + R + + ANRR+ + Sbjct: 248 PEE-MIVMRYWGKSRPIDKRGNRKSSPANRRVVV 280 >gi|330446461|ref|ZP_08310113.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490652|dbj|GAA04610.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 166 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 7/100 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD ++ PE I L + + I I GHTD ++ N LSL R+++ Sbjct: 63 FDFDKAVLKPEDIKELDDFIAKIHSLSGDILIAGHTD---YQGSDSYNEALSLRRSHAIE 119 Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKIASDP--MNSANRR 333 L + E ++ F + N+ NRR Sbjct: 120 SYLKAR-IDESHYQFEVKYFGEKNPIVKGHSLKANALNRR 158 >gi|116624434|ref|YP_826590.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116227596|gb|ABJ86305.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 508 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 30/260 (11%), Positives = 89/260 (34%), Gaps = 17/260 (6%) Query: 84 FDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHC 143 D + + I + + + + + + +++Q+++ Sbjct: 247 ADTSLISQSARAAVQTAEDARLIAERRAQEQNLAAARSTAAAAEQEKLQAQADAQRAKVE 306 Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 +S + + + + + + + A R + + + S + Sbjct: 307 ADSARAQIDAERAARQQAEAAAAAAESRAAAGADRAAATPPAALPAPRREAVDQ--KSQV 364 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + +++ + T G+++++ DQ +S+ + + + V A Sbjct: 365 RMRLLESLNGLLPSRDTPRGLIVTVPDQGFN-----GASLRTDYSERLARVAAVVAAEQG 419 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 ++I G TD++ + L++ RAY +M+ G+ + G R + Sbjct: 420 LRMTIEGSTDSAATES-------LAMKRAYEVRDAMMRGGLPSSSVDA-RGLGASRPLTS 471 Query: 324 SDPMNSA--NRRIDILVEDR 341 + + NRR++I++ Sbjct: 472 NGTESGRSTNRRVEIVISGS 491 >gi|152989276|ref|YP_001348049.1| hypothetical protein PSPA7_2689 [Pseudomonas aeruginosa PA7] gi|150964434|gb|ABR86459.1| hypothetical protein PSPA7_2689 [Pseudomonas aeruginosa PA7] Length = 465 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 85/297 (28%), Gaps = 19/297 (6%) Query: 55 NATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 + T + ++ + +L + H S D + Sbjct: 174 SLTTAQLAAVFAGEVRTWEALGGKGGAIRLYARDEQSGTYDTFRELVLASHGKSLSADAR 233 Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK----- 169 +N + + S L + + L + + Sbjct: 234 RFESNDRLSAAVAADPHAIGFVGVASVGGARPLAVADGESLPMAPLESLIATEDYPLSRR 293 Query: 170 ---EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + + ++ + R Q + + + A + + Sbjct: 294 LFLYQKPGEKNPWAQALVRFAQSPRGQAIVTRSGFVAQRIQAVQVAPRPQMPAEYRQLAE 353 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARD 283 F + S++ + ++ +Q++ + L + ++ + G D P + R Sbjct: 354 QARRLTVNFRFQEGSALLDNKALLDVQRLLDYLRQNQKMRKRTVLVGFGD--PKSDAERS 411 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 LS RA + + L + GVS +I GF +++ NRR+++ V Sbjct: 412 VL-LSRLRAMAVRRELARGGVS---FREIVGFGDELPVASNEQEAGRQKNRRVEVWV 464 >gi|225873020|ref|YP_002754479.1| ompA family protein [Acidobacterium capsulatum ATCC 51196] gi|225791412|gb|ACO31502.1| ompA family protein [Acidobacterium capsulatum ATCC 51196] Length = 446 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 32/271 (11%), Positives = 67/271 (24%), Gaps = 9/271 (3%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQ 125 ++ + N + + + N+ + + + + T +Q Sbjct: 169 AEFLHTALPNGINGEQNTLEIGAGVVFKFGNRTRYIPAPPMHMPAKQVDLSCTQSAEQVP 228 Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 E + + G + + E + Sbjct: 229 PGEPLEIIAQAITWPGNDAVDYDWHASAGTVQGSGSMVSIETAGLEPGTYHVYGTAHLAD 288 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 ++ I V V T ++ FD + Sbjct: 289 DAGVHSDCQVSFTIVPPQKAKVI--TRTIVEKPATNNPAMLDFEKNIQDAFFDYNQYNLR 346 Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 P+ + L + I+I G D A N L L RA + + L K G+ Sbjct: 347 PDAQSAIAHDASYLESHPDIHITIAGFADER---GTAEYNIWLGLQRALAVRRALAKDGI 403 Query: 305 SEDRISKISGFAHHRLKIASDPMN--SANRR 333 R++ + + + + NRR Sbjct: 404 DMGRMN-VLSYGKEKQFCSDQTPACFQQNRR 433 >gi|15612119|ref|NP_223771.1| putative Outer membrane protein [Helicobacter pylori J99] gi|4155645|gb|AAD06633.1| putative Outer membrane protein [Helicobacter pylori J99] Length = 179 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 67 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K NRR+D+ + Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGESKPKCVQKTRECYRENRRVDVKL 177 >gi|84515254|ref|ZP_01002616.1| OmpA domain protein [Loktanella vestfoldensis SKA53] gi|84510537|gb|EAQ06992.1| OmpA domain protein [Loktanella vestfoldensis SKA53] Length = 497 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 12/111 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ + + +Q++ + L I I G TD N RL+L RA Sbjct: 391 FASGSANLDNKALEDVQRMVDFLNSPAARNREILIIGFTDDV---GRFDLNERLALLRAG 447 Query: 294 SAYQVLMKS---GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 S L+ + V R + ++ + +D + NRR++I + Sbjct: 448 SVRNALVTALGGDVLAGR-TSVASYGPLAPVGCNDTADGRESNRRVEIWLR 497 >gi|330875090|gb|EGH09239.1| OmpA family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 447 Score = 67.3 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 11/108 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + S+ + L+++ E L + +++ G DA A LS RA Sbjct: 346 FAQGSARLDNKAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAAL---LSRLRAM 402 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + + L+KSGV+ I G +D + NRR+++ V+ Sbjct: 403 AVRRELIKSGVT---FRDILGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447 >gi|333030282|ref|ZP_08458343.1| OmpA/MotB domain protein [Bacteroides coprosuis DSM 18011] gi|332740879|gb|EGJ71361.1| OmpA/MotB domain protein [Bacteroides coprosuis DSM 18011] Length = 227 Score = 67.3 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 6/112 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLD 290 + +FD +SS P + L + ++L + + G TD N +S Sbjct: 109 DSGILFDFNSSTLSPASRSSLSQFADILRQDPTIDIAVFGKTDKV---GTYDANMTVSNR 165 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 RA S L GV++ + + G + + + + NR +DI + + Sbjct: 166 RAQSVKSFLQSQGVNDYQFKSVQGVGYTQ--YDEALLPAQNRVVDIYMYASE 215 >gi|329849877|ref|ZP_08264723.1| ompA family protein [Asticcacaulis biprosthecum C19] gi|328841788|gb|EGF91358.1| ompA family protein [Asticcacaulis biprosthecum C19] Length = 254 Score = 67.3 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 8/133 (6%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRG 270 + VL ++ F S+ ++ +L I + + + S+ G Sbjct: 120 EQVLQAAEDCTDRVTAAVADRRLQFISGSAELTGDSQAILIDIYNTIQTCPQNLALSVEG 179 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328 +TD DN +LS RA +A L+ G+++ +S G+ + Sbjct: 180 YTDNV---GQDNDNMKLSTARAEAAAFALIDLGLAQASVSS-RGYGAQNPIADNTSEDGR 235 Query: 329 SANRRIDILVEDR 341 + NRR+D ++ R Sbjct: 236 ARNRRVDFILRPR 248 >gi|34540489|ref|NP_904968.1| immunoreactive 42 kDa antigen PG33 [Porphyromonas gingivalis W83] gi|27805653|sp|Q9S3R8|OMP40_PORGI RecName: Full=Outer membrane protein 40; Short=Omp40; AltName: Full=PG33; Flags: Precursor gi|5759279|gb|AAD51068.1|AF175715_1 immunoreactive 42kD antigen PG33 [Porphyromonas gingivalis] gi|34396802|gb|AAQ65867.1| immunoreactive 42 kDa antigen PG33 [Porphyromonas gingivalis W83] Length = 380 Score = 67.3 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 12/152 (7%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP--MFDKSSSIPLPE 247 + DL +I+S L G V + + V ++ F +S+ Sbjct: 235 ALVNDLNNQINS-LRGQVEELSRRPVSCPECPEPTQPTVTRVVVDNVVYFRINSAKIDRN 293 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + + E + I + G+ D A N +LS RA + ++L K GVS D Sbjct: 294 QEINVYNTAEYAKTNNAPIKVVGYADEK--TGTAAYNMKLSERRAKAVAKMLEKYGVSAD 351 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 RI I N+ NR I+V Sbjct: 352 RI-TIEWKGSSEQIY---EENAWNR---IVVM 376 >gi|89094116|ref|ZP_01167059.1| probable signal peptide protein [Oceanospirillum sp. MED92] gi|89081591|gb|EAR60820.1| probable signal peptide protein [Oceanospirillum sp. MED92] Length = 198 Score = 67.3 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 17/121 (14%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 +++ FD S P + + + L +++ GH D + N LS Sbjct: 86 EKHIVYFDFDS--SNPGDVSDIADYIKSLKEV-NSVNLVGHADRI---GASAYNDALSQK 139 Query: 291 RAYSAYQVLMKSGVSEDRISKISGF-AHHRLKIASDPMNS--------ANRRIDILVEDR 341 R + L +GVS IS G+ + + D ANRR+++ + + Sbjct: 140 RVNAVSDALQGAGVSGSAIST--GYMGENAPAKSCDGQRGTNLIDCLRANRRVEVEISGK 197 Query: 342 Q 342 + Sbjct: 198 K 198 >gi|327189348|gb|EGE56516.1| putative outer membrane protein, OmpA family [Rhizobium etli CNPAF512] Length = 722 Score = 67.3 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 13/201 (6%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 ++ R+S D ++ ++ LPP+ L+ D + LS Sbjct: 512 DARGRESVLYYSPDLYEDPDRGYFEDPGADLPPMRLRVPLSDYIVDTRSDPDRDYYEFLS 571 Query: 205 GLVADNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-- 259 + + + + + I +T F S+ L+K+ + + Sbjct: 572 EPPVEPVERVYSLDEVKYSARIRDKVRRIDLDTITFATGSAEIPMAQARTLRKVADAISQ 631 Query: 260 ---AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGF 315 +E I GHTDA + N LS RA S VL G+ + + G+ Sbjct: 632 VLKKDPSETFLIEGHTDAV---GSDQSNLVLSDQRAESVANVLSDVYGIPPENM-ATQGY 687 Query: 316 AHHRLKIASDPMNSANRRIDI 336 LK+ + NRR+ I Sbjct: 688 GERYLKVNTAGPEQENRRVTI 708 >gi|289625126|ref|ZP_06458080.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648705|ref|ZP_06480048.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330867997|gb|EGH02706.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 447 Score = 67.3 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 11/173 (6%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + ++ + Q + + + A + + Sbjct: 281 PTSAHQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERL 340 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288 F + S+ + L+++ E L + +++ G DA A LS Sbjct: 341 SVNFRFAQGSAKLDNKAQQDLKRVAEYLKTSNQLNQHVTLVGFGDAKSDPARAAL---LS 397 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 RA + + L+KSGV+ I G +D + NRR+++ V+ Sbjct: 398 RLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447 >gi|332304548|ref|YP_004432399.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171877|gb|AEE21131.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 368 Score = 67.3 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 28/225 (12%), Positives = 61/225 (27%), Gaps = 10/225 (4%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE-NYFLPPLSKE 181 + + ++ S S + + SI+K + Sbjct: 143 EIAAYHDFGEAYNDVSAKIGLAYSFGATSAPVTRDSDNDGVNNSIDKCPGTAPGVQVDAM 202 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + + V + + + +F +S Sbjct: 203 GCALAATAVEADSDNDGVVDSQDKCANTPSSDKVDATGCSIFTEVEVEETLR-ILFANNS 261 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 S ++ + ++ G+ A + N LS +RA + VL+ Sbjct: 262 SEIANRANSDIRDFAAFMKRFPSTDTVIEGYASA---PGESDYNQWLSEERAKAVRMVLI 318 Query: 301 K-SGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 + + RI+ + G+ +L A + NRRI V + Sbjct: 319 EDYDIKPARITAV-GYGESKLLDAPTAKEANKINRRIVARVSASK 362 >gi|268316443|ref|YP_003290162.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252] gi|262333977|gb|ACY47774.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252] Length = 496 Score = 67.3 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 55/143 (38%), Gaps = 13/143 (9%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 + L D++ ++ E T ++ ++ + F+ S VL++ VL Sbjct: 359 ADNELGRDSVQARIVVEPTACDLISTL----ESVSFEFGRSTLTDSARAVLERNARVLQS 414 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 E V+ + G+TD + N LSL RA + Y + G+ +R+ G Sbjct: 415 CPELVVQLVGYTD---YVGGEAFNALLSLRRALAVYNYYQQQGIEPERLI-FRGLGELPP 470 Query: 321 KIASDPMNS---ANRRID-ILVE 339 + RR+D I++ Sbjct: 471 PCPNPADRPGCRELRRVDTIVIR 493 >gi|330960958|gb|EGH61218.1| OmpA family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 447 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 67/209 (32%), Gaps = 13/209 (6%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 ++ + +R L + D S + ++ + + A Sbjct: 245 ARAVAIADGESRPMLPTTSLVATEDYPLSRRLYLYVPPAAHQRWAQALVRFAQSPEGQAI 304 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK--SSSIPLPETIVVLQKI 255 + + ++ +R + F S+ + L+++ Sbjct: 305 VAQEGFVAQTVQALKVQPTAQMPADYQALTRKAERLSVNFRFAQGSARLDNKAQQDLKRV 364 Query: 256 GEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + L + + +++ G DA A LS RA + + L+KSGV+ I Sbjct: 365 VDYLKANDRLDQHVTLVGFGDAKSDPARAAL---LSRLRAMAVRRELLKSGVT---FRDI 418 Query: 313 SGFAHHRLKIASDPMNSA--NRRIDILVE 339 G +D + NRR+++ V+ Sbjct: 419 LGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447 >gi|291278013|gb|ADD91481.1| outer mebrane protein A [Riemerella columbina] gi|291278015|gb|ADD91482.1| outer mebrane protein A [Riemerella columbina] Length = 326 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 71/251 (28%), Gaps = 21/251 (8%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N AS + +R +D T + + ++ Sbjct: 94 KSTVANFWQASATLNFRFGNQDRDKDGVLDKDDLCPDTPGLAEFQGCPDTDGDGVPNKDD 153 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 N ++ + C T D+ EN P ++ + + Sbjct: 154 NCPDVAGPVDNNGCPWPDTDGDGVLDKDDACVDV---AGPAENNGCPWPDRDNDGVLDKD 210 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + D+ + AD+ F+ + + PE+ Sbjct: 211 DKCPDVPGLVQYDGCPKTADDYATEAT-------------GALQGIFFNFNKASIRPESN 257 Query: 250 VVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L + +++ + + GHTDA + A N RLS +RA S L GVS + Sbjct: 258 GKLDQAADIIKSSNGGTFLVTGHTDA---KGNANYNLRLSRERAASVVAALEARGVSSSQ 314 Query: 309 ISKISGFAHHR 319 + G Sbjct: 315 LKS-RGVGSAE 324 >gi|237752333|ref|ZP_04582813.1| OmpA/MotB [Helicobacter winghamensis ATCC BAA-430] gi|229375822|gb|EEO25913.1| OmpA/MotB [Helicobacter winghamensis ATCC BAA-430] Length = 276 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 58/163 (35%), Gaps = 8/163 (4%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 ++ + + + + I S + + G I+ +FD+ Sbjct: 74 QQQADITVEPETAEEVRLIESAILDFKENVKTSLGPSNIIDEGSEGFILRFSGKLLFDEG 133 Query: 241 SSIPLPETIV-VLQKIGEVLAHSTE--VISIRGHTDASPFRNI--ARDNWRLSLDRAYSA 295 V L+++ +L + + G+TD +D+ LS RA Sbjct: 134 EITLNDADEVLFLKRLALILQKMPSTLHLDVIGYTDNRTISPTPKFKDDIGLSALRALGV 193 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 +VL+++GV+ +++ + G + + NRR++ Sbjct: 194 ERVLLENGVNPKKMTAL-GNGATNFILPNTTKENRQKNRRVEF 235 >gi|332297504|ref|YP_004439426.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168] gi|332180607|gb|AEE16295.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168] Length = 1044 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 11/89 (12%) Query: 260 AHSTEVISIRGHTDASPFR-----NIARDNWRL---SLDRAYSAYQVLMKSGVSEDRISK 311 + I GH + + A N L S RA + ++L++ GV R++ Sbjct: 955 KFKDYTVRIEGHANNVTGTEAEETSTANGNIPLVPLSEARAQTVKKMLIEFGVDGSRLTT 1014 Query: 312 ISGFAHHRLKIA--SDPMNSANRRIDILV 338 + G + + NRR++ ++ Sbjct: 1015 V-GIGGRQPVVPRSDKDNWWKNRRVEFIL 1042 >gi|258624773|ref|ZP_05719704.1| outer membrane protein [Vibrio mimicus VM603] gi|258582935|gb|EEW07753.1| outer membrane protein [Vibrio mimicus VM603] Length = 173 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 53/152 (34%), Gaps = 10/152 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETI 249 + ++S T + + + + D+++ + + + Sbjct: 25 TQVRGRLSETQVQHTNQILNESKQQVEVKHRSDLCTYDEQSQSLLLHYPFNKYQLSGPHQ 84 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +LQ ++ S I + GH D + + N LS RA + + L + +RI Sbjct: 85 EILQTYVSMV-DSQYKIVVEGHADQT---GNPKYNQALSERRAGAVTRYLRDTLKLGNRI 140 Query: 310 SKISGFAHHRLK--IASDPMNSANRRIDILVE 339 + GF + + NRR+ + ++ Sbjct: 141 VE-KGFGESTPVCTVQENAQTGCNRRVVLTIQ 171 >gi|320107209|ref|YP_004182799.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4] gi|319925730|gb|ADV82805.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4] Length = 257 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 7/117 (5%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARDNW 285 FD S + + Q+ LA + + G + D A N Sbjct: 145 EFHQNVQDVFFDYDSYDLRLDAGALAQRAASYLAAHPAIKVVIGGYCDER---GSAEYNL 201 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVED 340 L +RA +A L+ +GVS +R+ ++ + + ++ NRR ++ Sbjct: 202 ALGENRANAAKTALVTAGVSPNRL-RVISYGKEKQFCTEQNETCYQQNRRAQFSLDR 257 >gi|260428375|ref|ZP_05782354.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45] gi|260422867|gb|EEX16118.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45] Length = 817 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 13/105 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ E VL ++ ++A + + I GH D N LS+ RA Sbjct: 236 FAIDSARLKDEHRAVLAELRRLIAVAEPGALRVVIVGHADE---SGPELHNSGLSVRRAR 292 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 + L ++ V+ I+GF +D S NRR++I Sbjct: 293 AVRTALGRASVAG-----IAGFGEAAPLDPADSVEARSRNRRVEI 332 >gi|188994593|ref|YP_001928845.1| outer membrane protein 41 precursor [Porphyromonas gingivalis ATCC 33277] gi|53828382|dbj|BAD54749.1| hypothetical protein [Porphyromonas gingivalis] gi|188594273|dbj|BAG33248.1| outer membrane protein 41 precursor [Porphyromonas gingivalis ATCC 33277] Length = 391 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 16/149 (10%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 ++ L ++ V+ V T IL +F S + + ++ Sbjct: 254 QINRLRSEVEELSKRPVSCPECPEVTPVTKTENIL-----TEKAVLFRFDSHVVDKDQLI 308 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRI 309 L + + + + E I++ G+ D + + N +LS RA + VL K GV + + Sbjct: 309 NLYDVAQFVKETNEPITVVGYADPT---GNTQYNEKLSERRAKAVVDVLTGKYGVPSE-L 364 Query: 310 SKISGFAH-HRLKIASDPMNSANRRIDIL 337 + + + N R+ I+ Sbjct: 365 ISVEWKGDSTQPF----SKKAWN-RVVIV 388 >gi|217032687|ref|ZP_03438173.1| hypothetical protein HPB128_202g21 [Helicobacter pylori B128] gi|216945617|gb|EEC24268.1| hypothetical protein HPB128_202g21 [Helicobacter pylori B128] Length = 157 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 45 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 101 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K A NRR+D+ + Sbjct: 102 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 155 >gi|34540490|ref|NP_904969.1| immunoreactive 43 kDa antigen PG32 [Porphyromonas gingivalis W83] gi|37538316|sp|Q9S3R9|OMP41_PORGI RecName: Full=Outer membrane protein 41; Short=Omp41; AltName: Full=PG32; Flags: Precursor gi|34396803|gb|AAQ65868.1| immunoreactive 43 kDa antigen PG32 [Porphyromonas gingivalis W83] Length = 391 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 16/149 (10%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 ++ L ++ V+ V T IL +F S + + ++ Sbjct: 254 QINRLRSEVEELSKRPVSCPECPEVTPVTKTENIL-----TEKAVLFRFDSHVVDKDQLI 308 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRI 309 L + + + + E I++ G+ D + + N +LS RA + VL K GV + + Sbjct: 309 NLYDVAQFVKETNEPITVVGYADPT---GNTQYNEKLSERRAKAVVDVLTGKYGVPSE-L 364 Query: 310 SKISGFAH-HRLKIASDPMNSANRRIDIL 337 + + + N R+ I+ Sbjct: 365 ISVEWKGDSTQPF----SKKAWN-RVVIV 388 >gi|333029776|ref|ZP_08457837.1| OmpA/MotB domain protein [Bacteroides coprosuis DSM 18011] gi|332740373|gb|EGJ70855.1| OmpA/MotB domain protein [Bacteroides coprosuis DSM 18011] Length = 389 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 8/131 (6%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI---SIIDQRNTPMFDKSSSIPL 245 + ++ L ++ + + + R ++ + + F S Sbjct: 245 ESEMRRLQNQLRDA--QAYNNQLKDEIEALRNRKPEVVYKETSANDSRVVFFQIGKSNLT 302 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 +V +Q + E + + + + G+ D+ N RLS RA + L+K GV Sbjct: 303 SRDLVTVQMMAESIKATDKTYKVVGYADS--ATGSKALNQRLSEARANAVKDALIKEGVK 360 Query: 306 EDRISKISGFA 316 E ++ ++ G Sbjct: 361 ESQL-EVVGMG 370 >gi|329847556|ref|ZP_08262584.1| ompA family protein [Asticcacaulis biprosthecum C19] gi|328842619|gb|EGF92188.1| ompA family protein [Asticcacaulis biprosthecum C19] Length = 438 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + T F +S+ P + + V+ + +++ GH D A N +LS Sbjct: 330 RNFTVYFPFNSATPTADGLAVISAAAQQARSQPGAPVTVTGHADT---SGSAPYNIQLSQ 386 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338 +RA L++ GV ++ + + + N+ NRR I + Sbjct: 387 NRARMVADGLIQMGVPASAVNT-DWKGEAQPAVPTGNGVKNAENRRATISI 436 >gi|291334148|gb|ADD93818.1| outer membrane protein [uncultured marine bacterium MedDCM-OCT-S05-C362] Length = 269 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 7/106 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +D SS PE L + +V ++ GH D + R N LS++RA Sbjct: 165 YDHDSSDISPEDQAYLSAEVGRIPMHDKVSLTVVGHADRT---GTERYNHDLSVERAIGV 221 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 ++ L + G+ DR +S I + NRR ++L++ Sbjct: 222 HRALSQYGI-GDRSIGVSAKGETVPAIPTSDGQSEPRNRRSEVLIK 266 >gi|328884733|emb|CCA57972.1| secreted protein [Streptomyces venezuelae ATCC 10712] Length = 205 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 55/187 (29%), Gaps = 16/187 (8%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK-KISSTLSGLVADNIV 212 G D + S L + L I + + Sbjct: 20 GPVPVARADDPPGSAGDAAPPPAIDSNAPGLMLPDGATLAPAKVLDIKQIVEEEGGEQRR 79 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGH 271 + + T + +F K+S+ P + I + + + + G Sbjct: 80 QDTNVDVTFA--------LQAEVLFPKNSAKLTPAANARIAAIAAEIKKLGSGRVRVFGF 131 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA- 330 TD +LS +RA + QVL +S + + I G++ + Sbjct: 132 TDNL---GTYAHGLKLSKERAVAVQQVLARS-LDQGTTFDIRGYSEDYPIADNATEEGRK 187 Query: 331 -NRRIDI 336 NRR++I Sbjct: 188 KNRRVEI 194 >gi|189466361|ref|ZP_03015146.1| hypothetical protein BACINT_02736 [Bacteroides intestinalis DSM 17393] gi|189434625|gb|EDV03610.1| hypothetical protein BACINT_02736 [Bacteroides intestinalis DSM 17393] Length = 385 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 72/272 (26%), Gaps = 15/272 (5%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 +NP G + + + + V + G+T L Sbjct: 125 YNPNRVVDFYLFAGPTMNLSSKGTEFTGGMVGDAYQLAANDDVKARFGATAGLGLGFNLN 184 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + + + ++ + F ++ Sbjct: 185 QKLALNVEGRFGVTPSIFGDASDCRKAEATARVNVGLTYTFGGKKFAKVSDIDEDAINAE 244 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 R + + + L+ + I F S+ Sbjct: 245 INRYRSELAQAQADLANCKNSLANMKPEVKEVIKEIQ---TAGPRAIFFKIGSARLDDYG 301 Query: 249 IVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 V +Q ++L + + + G+ D A N +LS RA Y L+ GV +D Sbjct: 302 KVNIQLAAKILKANPDKKYKVAGYCD--KATGSAAYNQKLSEKRAQVVYDALIAEGVDKD 359 Query: 308 RISKISGFAHHRLKIASDPMNSAN--RRIDIL 337 ++ + GF + N R+ IL Sbjct: 360 QLEFV-GFGGTENMFS------KNYLNRVVIL 384 >gi|116750906|ref|YP_847593.1| OmpA/MotB domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116699970|gb|ABK19158.1| OmpA/MotB domain protein [Syntrophobacter fumaroxidans MPOB] Length = 522 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 47/117 (40%), Gaps = 11/117 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 + + +F +S + + + + E L H + +GHT N LS Sbjct: 407 KTDPVVFQSGTSDLSFQGKLEIDRAVERLKHYPNFRVVIKGHTGTE---GDPEANKTLSR 463 Query: 290 DRAYSAYQVL-MKSGVSEDRISKISGFAHHRLK--IASDPMNSAN-R--RIDILVED 340 +R+ + + L + ++ +R+ + GF + + S N R R+++++ Sbjct: 464 ERSEAVARYLEVTYNINPNRLLPV-GFGGEKPLPRNPGESTRSYNYRLPRVEMVLVR 519 >gi|163795658|ref|ZP_02189623.1| OmpA/MotB [alpha proteobacterium BAL199] gi|159178954|gb|EDP63489.1| OmpA/MotB [alpha proteobacterium BAL199] Length = 285 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 61/236 (25%), Gaps = 10/236 (4%) Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 +++ + I + + S + L ++ Sbjct: 54 AEMEFAEGDYMDSDTFAARAIASANGKPPAPEELASRDIPAAAQGGLAEARRKLMEALDG 113 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS--GLVADNIVKGVLFETTRTGILISI 228 P + + A + + + D + + SI Sbjct: 114 GARTAKPDAAARAQASFDCWMQEQEENFQPADIKWCKDRFDAAMAQLGTPAPAAAPKPSI 173 Query: 229 IDQRNTPMFDKSSSIPLPETIVVL-QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 T FD S +T L + I + G+ D N L Sbjct: 174 TFANFTVYFDFDKSTLTAQTQSTLIDAANAADDMAATNIEVSGYADR---SGSEAYNMAL 230 Query: 288 SLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340 S RA + + L G + +++ F + K+ + NRR+ I + Sbjct: 231 SQRRADAVAKELTTLIGAKAPAMKRLA-FGESQNKVVTPDGVKEAKNRRVKIEIRK 285 >gi|158338606|ref|YP_001519783.1| outer membrane protein A [Acaryochloris marina MBIC11017] gi|158308847|gb|ABW30464.1| outer membrane protein A, putative [Acaryochloris marina MBIC11017] Length = 507 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 66/251 (26%), Gaps = 13/251 (5%) Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 S + D+ T + T + Sbjct: 265 SGISNRSQLQDQIATDGDLSAPDADTVLNGINFFTALEAQDWMQQDALNQRITATAAVLV 324 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 L + + + + + +K++ + R + K + S A Sbjct: 325 LSGTLTQVPENPSQLYDPQFVSQAADNTKKLIDIVRADNPELAKKLEGKSPSTQTASKPT 384 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIR 269 + + + + F ++ L K+ + +A + Sbjct: 385 ADIKSAPSIGNLKVR-----GEVKFAVGAANLTSSGRQTLDKLSKEIAEFNPDTVAVRVI 439 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 GHT + A N LS RA Q L + G+ + + G P ++ Sbjct: 440 GHTSKT---GSASLNQSLSQQRAQVVVQYLKRLGIKQA--IQAEGKGFSAPLPGIPPSDA 494 Query: 330 ANRRIDILVED 340 N+R +I + Sbjct: 495 RNQRTEIRLVR 505 >gi|308183230|ref|YP_003927357.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori PeCan4] gi|308065415|gb|ADO07307.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori PeCan4] Length = 179 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 67 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K NRR+D+ + Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCVQKTRECYRENRRVDVKL 177 >gi|283955761|ref|ZP_06373252.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 1336] gi|283792716|gb|EFC31494.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 1336] Length = 247 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 66/186 (35%), Gaps = 5/186 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ +W I+ T+ +A++ F T Sbjct: 3 KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTST 61 Query: 79 AS----KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + ++ + +++ +T+ ++ + + Q N + Sbjct: 62 QTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAALDQSDNQVALNLPSKV 121 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + S ++ +D K + ++ + Y S + + ++ Sbjct: 122 EFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIRSYELAYQRAENV 181 Query: 195 LAKKIS 200 L I Sbjct: 182 LKYFIE 187 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 15/177 (8%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + + K K A + L+ L + + + + + Sbjct: 57 DYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAA----LDQSDNQ 112 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNI 280 + +++ + F++ S+ + I K L I IRG+TD S Sbjct: 113 VALNLPSKVE---FERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIR 169 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + L+ RA + + ++ G + I I + + + P N R++I Sbjct: 170 SY---ELAYQRAENVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQALENNRVEIY 221 >gi|163795725|ref|ZP_02189690.1| OmpA/MotB [alpha proteobacterium BAL199] gi|159179021|gb|EDP63556.1| OmpA/MotB [alpha proteobacterium BAL199] Length = 313 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 66/214 (30%), Gaps = 11/214 (5%) Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + + ++ L DL + ++I E + Sbjct: 86 DTPMPVELANRNIANPTKLAELEAARADLVSTLQTGRTIAPVEAGVAQAKFDCWAEQQEE 145 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + +A ++ L + A T T + RNT FD P+ Sbjct: 146 GHQFDHIAACQTAYLMAMEALKAAMQ---PTNVTYETVQQEVARNTVYFDWDKDTIRPDQ 202 Query: 249 IVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG--VS 305 L K + V I GHTD N LS RA + L + G V Sbjct: 203 QAALDKFLAEMKAIGPVTLYIEGHTDT---SGPNDYNAELSRRRAENVRTDLRQQGMTVG 259 Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 E + ++ + L +A+ NRR+ I+ Sbjct: 260 EVKDLQLLAKGENDLAVATGDGVKEQQNRRVVII 293 >gi|188994592|ref|YP_001928844.1| outer membrane protein 40 precursor [Porphyromonas gingivalis ATCC 33277] gi|53828383|dbj|BAD54750.1| hypothetical protein [Porphyromonas gingivalis] gi|188594272|dbj|BAG33247.1| outer membrane protein 40 precursor [Porphyromonas gingivalis ATCC 33277] Length = 380 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 12/152 (7%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP--MFDKSSSIPLPE 247 + DL +I+S L G V + + V ++ F +S+ Sbjct: 235 ALVNDLNNQINS-LRGQVEELSRRPVSCPECPEPTQPTVTRVVVDNVVYFRINSAKIDRN 293 Query: 248 TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 + + E + I + G+ D A N +LS RA + ++L K GVS D Sbjct: 294 QEINVYNTAEYAKTNNAPIKVVGYADEK--TGTAAYNMKLSERRAKAVAKMLEKYGVSAD 351 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 RI I N+ NR I+V Sbjct: 352 RI-TIEWKGSSEQIY---EENAWNR---IVVM 376 >gi|86148944|ref|ZP_01067176.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597451|ref|ZP_01100686.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218561995|ref|YP_002343774.1| flagellar motor protein MotB [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840302|gb|EAQ57559.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190512|gb|EAQ94486.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112359701|emb|CAL34487.1| putative flagellar motor protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925608|gb|ADC27960.1| flagellar motor protein MotB [Campylobacter jejuni subsp. jejuni IA3902] gi|315927861|gb|EFV07186.1| ompA family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315928678|gb|EFV07961.1| ompA family protein [Campylobacter jejuni subsp. jejuni 305] Length = 247 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 66/186 (35%), Gaps = 5/186 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ +W I+ T+ +A++ F T Sbjct: 3 KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTST 61 Query: 79 AS----KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + ++ + +++ +T+ ++ + + Q N + Sbjct: 62 QTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAALDQSDNQVALNLPSKV 121 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + S ++ +D K + ++ + Y S + + ++ Sbjct: 122 EFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIRSYELAYQRAENV 181 Query: 195 LAKKIS 200 L I Sbjct: 182 LKYFIE 187 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 15/177 (8%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + + K K A + L+ L + + + + + Sbjct: 57 DYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAA----LDQSDNQ 112 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNI 280 + +++ + F++ S+ + I K L I IRG+TD S Sbjct: 113 VALNLPSKVE---FERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIR 169 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + L+ RA + + ++ G + I I + + + P N R++I Sbjct: 170 SY---ELAYQRAENVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQTLENNRVEIY 221 >gi|260889796|ref|ZP_05901059.1| OmpA family protein [Leptotrichia hofstadii F0254] gi|260860402|gb|EEX74902.1| OmpA family protein [Leptotrichia hofstadii F0254] Length = 231 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 17/156 (10%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM------FDKSSSIPLPETIVVL 252 I+ + I +D+ + F + + Sbjct: 62 IAKKNLEIANKLPKLCPDGAICENWTTIRFVDKDGKIVKMIIRGFPVNKEEVTEIEKREI 121 Query: 253 QKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED-R 308 + E L + E I G+ D + ++ LSL RA + L ++G+ +D + Sbjct: 122 KDEIEYLLNVFLENEEFVIVGYADET-----EKNKKELSLSRAEKMAEFLKQNGLRKDIK 176 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 ISKI+G + +D NRR++I +++ + Sbjct: 177 ISKITGKSSENPVDTNDTEIGRYNNRRVEIFLKNGK 212 >gi|5759277|gb|AAD51067.1|AF175714_1 immunoreactive 43kD antigen PG32 [Porphyromonas gingivalis] Length = 391 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 54/149 (36%), Gaps = 16/149 (10%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 ++ L ++ V+ V T IL +F S + + ++ Sbjct: 254 QINRLRSEVEELSKRPVSCPECPEVTPVTKTENIL-----TEKAVLFRFDSHVVDKDQLI 308 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRI 309 L + + + + E +++ G+ D + + N +LS RA + VL K GV + + Sbjct: 309 NLYDVAQFVKETNEPVTVVGYADPT---GNTQYNEKLSERRAKAVVDVLTGKYGVPSE-L 364 Query: 310 SKISGFAH-HRLKIASDPMNSANRRIDIL 337 + + + N R+ I+ Sbjct: 365 ISVEWKGDSTQPF----SKKAWN-RVVIV 388 >gi|190892104|ref|YP_001978646.1| outer membrane protein, OmpA family [Rhizobium etli CIAT 652] gi|190697383|gb|ACE91468.1| putative outer membrane protein, OmpA family [Rhizobium etli CIAT 652] Length = 722 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 13/201 (6%) Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLS 204 ++ R+S D ++ ++ LPP+ L+ D + LS Sbjct: 512 DARGRESVLYYSPDLYEDPDRGYFEDPGADLPPMRLRVPLSDYIVDTRSDPDRDYYEFLS 571 Query: 205 GLVADNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-- 259 + + + + + I +T F S+ L+K+ + + Sbjct: 572 EPPVEPVERVYSLDEVKYSARIRDKVRRIDLDTITFATGSAEIPMTQARTLRKVADAISQ 631 Query: 260 ---AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGF 315 +E I GHTDA + N LS RA S VL G+ + + G+ Sbjct: 632 VLKKDPSETFLIEGHTDAV---GSDQSNLVLSDQRAESVANVLSDVYGIPPENM-ATQGY 687 Query: 316 AHHRLKIASDPMNSANRRIDI 336 LK+ + NRR+ I Sbjct: 688 GERYLKVNTAGPEQENRRVTI 708 >gi|239995972|ref|ZP_04716496.1| peptidoglycan-associated lipoprotein [Alteromonas macleodii ATCC 27126] Length = 188 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 55/161 (34%), Gaps = 7/161 (4%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 P + + + + + V + + + + + T Sbjct: 26 PSEEELAAERNRLAQEQAAAEAEAREAEAQRVKAEAAQRMKRQEEMVQQEMEALKNEQTV 85 Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L K L + + ++I GHTD+ N L RA S Sbjct: 86 YFDFDRSSIKPEFQRILDKHAAFLVKNPSTKVTIEGHTDSR---GTPEYNIALGERRAQS 142 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 L+ +GVS +++ +S + + + + NRR Sbjct: 143 VETYLLNAGVSSSQVTVVS-YGEEKPAVMGSTEYAFAQNRR 182 >gi|307726627|ref|YP_003909840.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003] gi|307587152|gb|ADN60549.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003] Length = 367 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 16/111 (14%) Query: 237 FDKSS-SIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAY 293 FD+ LP L ++ L +V +IR G+TD N +LS RA Sbjct: 237 FDRGDLGGMLPAGKAKLDQLIRDLKQVDDVTAIRIAGYTDRL---GSDSYNRQLSTKRAE 293 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDI 336 + + L GV+ G + N +ANRR+++ Sbjct: 294 TVKRYLQNGGVTTP--ISARGRGKDNPVVECHDANRQALIDCLAANRRVEL 342 >gi|294678953|ref|YP_003579568.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB 1003] gi|294477773|gb|ADE87161.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003] Length = 311 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 8/106 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S L + + LA E I++ GHTD N LS DRA + Sbjct: 205 FASGASQLAEGDFASLSALADYLATRPEARIALVGHTDN---SGALAANIALSRDRAAAV 261 Query: 296 YQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + L++ GV ++S G + ++ NRR++ ++ Sbjct: 262 RKRLIEKLGVPAGQLSA-EGAGWLSPRSSNLTPEGRDKNRRVEAVL 306 >gi|207110190|ref|ZP_03244352.1| flagellar motor protein MotB [Helicobacter pylori HPKX_438_CA4C1] Length = 109 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ F Sbjct: 3 KKNKPTECPAG-EKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPK 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 PP+ + + S + + K Sbjct: 62 PEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKA 98 >gi|6119896|gb|AAF04276.1|AF181881_2 PAL [Helicobacter pylori] Length = 157 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD L +I + + + + G+TD + N L + R S Sbjct: 56 FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 112 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L+ GV +D I IS F + K A NRR+D+ + Sbjct: 113 NALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRRVDVKL 155 >gi|283798975|ref|ZP_06348128.1| outer membrane protein [Clostridium sp. M62/1] gi|291073265|gb|EFE10629.1| outer membrane protein [Clostridium sp. M62/1] Length = 294 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 4/84 (4%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + + FD + P+ + +L + E+L + + + GHTD N Sbjct: 214 VPVSIDLKGVNFDFDKATLRPDAVAILNEAAEILKRNPSLRVEVAGHTD---LCGKDAYN 270 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDR 308 +LS RA + Y L +GV R Sbjct: 271 QKLSERRAKAVYDFLTSNGVDAGR 294 >gi|254294751|ref|YP_003060774.1| peptidoglycan-associated lipoprotein [Hirschia baltica ATCC 49814] gi|254043282|gb|ACT60077.1| peptidoglycan-associated lipoprotein [Hirschia baltica ATCC 49814] Length = 181 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 32/103 (31%), Gaps = 7/103 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 + +D VL + L V I G+ D N L R Sbjct: 71 SKIFYDVDQYSLDDADRQVLARQAAWLNTYPGVSILIAGNCDER---GTREYNIALGERR 127 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANR 332 A +A LM GVS RI +S + R + NR Sbjct: 128 AAAAKDYLMGLGVSAARIETVS-YGKERPTDPRSTTEAWSVNR 169 >gi|83646354|ref|YP_434789.1| flagellar motor protein [Hahella chejuensis KCTC 2396] gi|83634397|gb|ABC30364.1| Flagellar motor protein [Hahella chejuensis KCTC 2396] Length = 263 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 63/208 (30%), Gaps = 47/208 (22%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 S++ A+K + + + K I + + + + V T + I + Sbjct: 47 QKSEQWDDAIKEIAKAEQVRKDILREIEQELNEKNIP-VKISDNDTVLRI----PEDVLT 101 Query: 237 FDKSSSIPLPETIV-----------VLQKIGEVLAHSTEVISIRGHTDASPFRNIA-RDN 284 F + + + + I + GHTD P+RN + + N Sbjct: 102 FRQGRFDIPKDQLHQDIALEIGKVLFHTISKNSRWQYLDTIFVEGHTDKVPYRNSSIKGN 161 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDR-----------ISKISGFAHHRLK-----IASDP-- 326 W LS RA S + +R + +SG+A R + Sbjct: 162 WGLSTFRAISVWNFWNTMLEENERLGSLKNHMGKTLFSVSGYADTRPVPCTNADPNVTLK 221 Query: 327 ------------MNSANRRIDILVEDRQ 342 NRRIDI R+ Sbjct: 222 ELCPVGVLEESESQQKNRRIDIRFTVRR 249 >gi|149190367|ref|ZP_01868639.1| sodium-type flagellar protein MotY precursor [Vibrio shilonii AK1] gi|148835746|gb|EDL52711.1| sodium-type flagellar protein MotY precursor [Vibrio shilonii AK1] Length = 294 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 60/155 (38%), Gaps = 12/155 (7%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + R + + +SS L + + + IS +D++S Sbjct: 141 QDWQSRDERIEVSLSSVLFQAKYNVFSDCIANLLPYSFEDISFTILH----YDRNSEQLN 196 Query: 246 PETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + L++I E + ++ ++ + +TD+S + + +LS RA G Sbjct: 197 KTSQHRLEQIAEYVRYNQDIDLVLVSTYTDSSDSKGES---QQLSDKRASILQDYFQSLG 253 Query: 304 VSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 + +DRI ++ G+ R + + N+R+ I Sbjct: 254 LPKDRI-QVQGYGKRRPVAENSSPIGKAKNQRVVI 287 >gi|57237387|ref|YP_178400.1| flagellar motor protein MotB [Campylobacter jejuni RM1221] gi|86151261|ref|ZP_01069476.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|86153764|ref|ZP_01071967.1| flagellar motor component MotB [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612816|ref|YP_001000046.1| flagellar motor protein MotB [Campylobacter jejuni subsp. jejuni 81-176] gi|148926431|ref|ZP_01810114.1| putative flagellar motor protein [Campylobacter jejuni subsp. jejuni CG8486] gi|157414633|ref|YP_001481889.1| flagellar motor protein MotB [Campylobacter jejuni subsp. jejuni 81116] gi|167005002|ref|ZP_02270760.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|205356014|ref|ZP_03222782.1| putative flagellar motor protein [Campylobacter jejuni subsp. jejuni CG8421] gi|315123901|ref|YP_004065905.1| flagellar motor protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57166191|gb|AAW34970.1| chemotaxis protein MotB, putative [Campylobacter jejuni RM1221] gi|85841608|gb|EAQ58855.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|85842725|gb|EAQ59937.1| flagellar motor component MotB [Campylobacter jejuni subsp. jejuni HB93-13] gi|87250338|gb|EAQ73296.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|145844594|gb|EDK21700.1| putative flagellar motor protein [Campylobacter jejuni subsp. jejuni CG8486] gi|157385597|gb|ABV51912.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni 81116] gi|205346138|gb|EDZ32773.1| putative flagellar motor protein [Campylobacter jejuni subsp. jejuni CG8421] gi|307747273|gb|ADN90543.1| Chemotaxis protein MotB, putative [Campylobacter jejuni subsp. jejuni M1] gi|315017623|gb|ADT65716.1| flagellar motor protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315931586|gb|EFV10552.1| ompA family protein [Campylobacter jejuni subsp. jejuni 327] Length = 247 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 66/186 (35%), Gaps = 5/186 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ +W I+ T+ +A++ F T Sbjct: 3 KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTST 61 Query: 79 AS----KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + ++ + +++ +T+ ++ + + Q N + Sbjct: 62 QTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAALDQSDNQVALNLPSKV 121 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + S ++ +D K + ++ + Y S + + ++ Sbjct: 122 EFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIRSYELAYQRAENV 181 Query: 195 LAKKIS 200 L I Sbjct: 182 LKYFIE 187 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 15/177 (8%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + + K K A + L+ L + + + + + Sbjct: 57 DYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAA----LDQSDNQ 112 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNI 280 + +++ + F++ S+ + I K L I IRG+TD S Sbjct: 113 VALNLPSKVE---FERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIR 169 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + L+ RA + + ++ G + I I + + + P N R++I Sbjct: 170 SY---ELAYQRAENVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQALENNRVEIY 221 >gi|260467067|ref|ZP_05813247.1| peptidoglycan-associated lipoprotein [Mesorhizobium opportunistum WSM2075] gi|259029176|gb|EEW30472.1| peptidoglycan-associated lipoprotein [Mesorhizobium opportunistum WSM2075] Length = 168 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS + L + + L + I + GH D N L R Sbjct: 59 DRIFFDTDSSSIRADAQTTLARQAQWLNQYKQYAIVVEGHADER---GTREYNLALGARR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A +A L+ GV+ R+ IS + R S NRR Sbjct: 116 AAAARDFLVSKGVASSRLKTIS-YGKERPVAVCDDISCWSQNRR 158 >gi|115360985|ref|YP_778122.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD] gi|115286313|gb|ABI91788.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD] Length = 264 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 17/124 (13%) Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWR 286 ++ +F S P L E + E+ + GHTD + N Sbjct: 145 QSDALFAFGKSSLDSMLPAGKAQLDDAIERIKRHKEITRIVVVGHTDRI---GPSTVNEP 201 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILV 338 LS RA + L+ G++ I + G + S +RR+ I V Sbjct: 202 LSRARAQTVRGYLISHGLNGS-IIEAEGVGSSQPVTHCPAGQSRAVIACLQPDRRVSISV 260 Query: 339 EDRQ 342 R Sbjct: 261 SGRN 264 >gi|162455833|ref|YP_001618200.1| OmpA-like domain-containing protein [Sorangium cellulosum 'So ce 56'] gi|161166415|emb|CAN97720.1| OmpA-like outer membrane domain protein [Sorangium cellulosum 'So ce 56'] Length = 689 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 85/279 (30%), Gaps = 13/279 (4%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 +P GK D + N + + + G + + Sbjct: 398 SPPGKYGCPDPDNDEDGILDVDDRCPNNPEDRDGDEDDDGCPEGSDGDRDGDGILDSRDK 457 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + D++K KS +++ E Sbjct: 458 CPDDPEDRDGFQDKDGCPDPDNDKDGIPDKSDQCPNDPEDRDDFEDEDGCPEPDNDRDGI 517 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + D T +GL ++ ++ + F S+ LPE+ Sbjct: 518 PDVVDKCPNDPETFNGLEDEDGCPDKGSVVIEENNIVIL----EKIQFATGSAEILPESF 573 Query: 250 VVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED 307 ++Q + E L H E I GH D + N +L+ RA + L + GV+++ Sbjct: 574 GIVQAVAETLKHHPEFTMIEVQGHADER---SADAYNLKLTQARADAVAAALAQRGVNKN 630 Query: 308 RISKISGFAHHRLKIA--SDPMNSANRRIDI-LVEDRQG 343 + + G+ + + NRR++ +V +G Sbjct: 631 SVRSM-GYGEYCPIDPAHNAAAWEKNRRVEFKVVRTDKG 668 >gi|261749326|ref|YP_003257011.1| outer membrane protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497418|gb|ACX83868.1| outer membrane protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 408 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 13/110 (11%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD P ++ ++ +I E++ I G+TD+ N LS R Sbjct: 310 PILFDLGKFTLSPNSLEIIDEIYEIMIKKLPNSKFYINGYTDSY---GKHSYNKILSTRR 366 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 A S ++ L+ G+ R+ +I + R ++I + Sbjct: 367 ANSVFEALVSKGIDPSRM-EIRKLGKSV-------KRNKGRLVEITIRRS 408 >gi|166714360|gb|ABY87946.1| outer membrane protein [Acinetobacter sp. wpo2421] Length = 319 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S P+ + K+ E L+ I GHTD + + N RLSL RA Sbjct: 233 RVFFDTNKSDIKPQYKSEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 289 Query: 293 YSAYQVLM-KSGVSEDRISKISGFAHHRLKI 322 S L+ + V R+S GFA + Sbjct: 290 NSVKSALVNEYNVDASRLST-QGFAWDQPIA 319 >gi|126661868|ref|ZP_01732867.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38] gi|126625247|gb|EAZ95936.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38] Length = 274 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 66/161 (40%), Gaps = 15/161 (9%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K ++ ++ + ++ ++ + ++ G+ I + + F +++ + Sbjct: 122 EKDLEKENEVLGIKEAEPEVIIPEDATLAEKVKLSKVGMKIVLKNIN----FYQNTFATM 177 Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 PE+ L + ++ ++ E I I+GH N LS DRA + L+ +G+ Sbjct: 178 PESQGTLYDLLFIMQNNPELKIEIQGHICCID---KDYRN--LSTDRAKQIKRFLVYNGI 232 Query: 305 SEDRISKISGFAHHRLKIA----SDPMNSANRRIDILVEDR 341 + R+ GF + + + NRR++I + + Sbjct: 233 QDYRVKT-KGFGVSQPIHPIPEATPEQAAENRRVEIEILSK 272 >gi|91204944|ref|YP_537299.1| peptidoglycan-associated lipoprotein precursor [Rickettsia bellii RML369-C] gi|157827728|ref|YP_001496792.1| peptidoglycan-associated lipoprotein precursor [Rickettsia bellii OSU 85-389] gi|91068488|gb|ABE04210.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia bellii RML369-C] gi|157803032|gb|ABV79755.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia bellii OSU 85-389] Length = 155 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +SS + LQ+ L+ ++ GH D N L RA A Sbjct: 53 FAFNSSALSEKAKEELQRQACWLSRHPHVKATVEGHCDDR---GTREYNLALGERRAQKA 109 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR-IDIL 337 + L G+ R+S IS + RL + + + NRR + ++ Sbjct: 110 AEFLRHKGIEHHRVSTIS-YGKDRLAMMGNTEEAHAYNRRAVTVV 153 >gi|13473329|ref|NP_104896.1| peptidoglycan-associated lipoprotein precursor [Mesorhizobium loti MAFF303099] gi|22653894|sp|Q98F85|OMP16_RHILO RecName: Full=Outer membrane lipoprotein omp16 homolog; Flags: Precursor gi|14024078|dbj|BAB50682.1| mll3887 [Mesorhizobium loti MAFF303099] Length = 168 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS + L + + L + I + GH D N L R Sbjct: 59 DRIFFDTDSSSIRADAQTTLARQAQWLNQYKQYAIVVEGHADER---GTREYNLALGARR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A +A L+ GV+ R+ IS + R S NRR Sbjct: 116 AAAARDFLVSKGVASSRLKTIS-YGKERPVAVCDDISCWSQNRR 158 >gi|110637108|ref|YP_677315.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110279789|gb|ABG57975.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 841 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 39/115 (33%), Gaps = 8/115 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289 Q+ + FD SI L + I + GHTD++ N +LS Sbjct: 19 QQLSVFFDSGKSILSEREKQRLDSLIYTFETELIYDIRLVGHTDST---GYPEKNKQLSK 75 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 RA + Y L K S I+G A+ NRR DI + Sbjct: 76 ARAIAVYTYLSKR--KNIHFSSITGKGSLSPVQANTTDAGRAHNRRCDISITVSN 128 >gi|187250865|ref|YP_001875347.1| outer membrane protein [Elusimicrobium minutum Pei191] gi|186971025|gb|ACC98010.1| Outer membrane protein [Elusimicrobium minutum Pei191] Length = 993 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 7/115 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 I + +S + ++++ L I + G+TD N Sbjct: 883 IQFNSRDMEYQFNSCELTEKQKNIIREKCAALKDFPYTKIIVTGNTDNI---GSYGVNKS 939 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 +SL RA +A ++L++ G++ D I +I G A+ + + NRR DIL+ Sbjct: 940 ISLRRANAAAKILIEEGLNPDTI-EIMGVAYDNPVTGNLTREGRAMNRRTDILIL 993 >gi|330953391|gb|EGH53651.1| OmpA/MotB [Pseudomonas syringae Cit 7] Length = 447 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 11/173 (6%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + ++ + Q + + + + + Sbjct: 281 PTSAHQRWAQALVRFAQSAEGQAIVAQSGFVAQTVQVLKVQPTAQMPADYQALARKAERL 340 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288 F + S+ + L+++ + L +++ G DA A LS Sbjct: 341 SVNFRFAQGSARLDNKAQQDLKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAAL---LS 397 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 RA + + L+KSGV+ I G +D + NRR+++ V+ Sbjct: 398 RLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447 >gi|320577070|gb|ADW54044.1| outer membrane protein A [Sodalis glossinidius] Length = 267 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + PE L ++ L+ + + G+TD + N +LS Sbjct: 188 KSDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRI---GTEQYNQKLS 244 Query: 289 LDRAYSAYQVLMKSGVSEDRISK 311 +RA S L+ G+ D+IS Sbjct: 245 QERAQSVVSYLVSKGIPSDKISA 267 >gi|217034805|ref|ZP_03440196.1| hypothetical protein HP9810_866g2 [Helicobacter pylori 98-10] gi|216942664|gb|EEC22235.1| hypothetical protein HP9810_866g2 [Helicobacter pylori 98-10] Length = 157 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD L +I + + + + G+TD + N L + R S Sbjct: 56 FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 112 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L+ GV +D I IS F + K NRR+D+ + Sbjct: 113 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYKENRRVDVKL 155 >gi|227822263|ref|YP_002826234.1| OmpA family protein [Sinorhizobium fredii NGR234] gi|227341263|gb|ACP25481.1| OmpA family protein [Sinorhizobium fredii NGR234] Length = 758 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 66/195 (33%), Gaps = 13/195 (6%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 SE + ++ + Y LPP+ + +D + LS + Sbjct: 555 SEYVMMYTPEYEDDRPAIVDVGYELPPMRLGIPVDEYIVDVAEDPDRDYYEFLSEPPVEQ 614 Query: 211 IVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHS 262 + + + R + +T F S+ L+ + + + Sbjct: 615 VERVYTIDEVRNSARLRDKVRRIDLDTIEFATGSAEVSMSQAKTLRNVADAMSKVLEKDP 674 Query: 263 TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK 321 E I GHTDA R N LS +RA S +L + GV + + G+ LK Sbjct: 675 GETFFIEGHTDAV---GSDRSNLVLSDERAESVAVLLTEVYGVPAENLVT-QGYGERFLK 730 Query: 322 IASDPMNSANRRIDI 336 I + NRR+ I Sbjct: 731 IRTPEAEQENRRVTI 745 >gi|84502861|ref|ZP_01000974.1| OmpA family protein [Oceanicola batsensis HTCC2597] gi|84388844|gb|EAQ01714.1| OmpA family protein [Oceanicola batsensis HTCC2597] Length = 191 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F P L + + + + I GHTD+ N RLS +RA + Sbjct: 93 FFATDKYYISPANRQRLAEFFK--SSTATAFIIAGHTDSR---ASDEYNMRLSYNRANAV 147 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 +V +G RI+ + G+ ++ + NRR++I+ Sbjct: 148 ARVAAATG---ARIADVRGYGERMPAATNNTRAGMAKNRRVEII 188 >gi|330503247|ref|YP_004380116.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] gi|328917533|gb|AEB58364.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01] Length = 460 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 43/128 (33%), Gaps = 11/128 (8%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHT 272 T + F + S+ + LQ++ + L + + G Sbjct: 338 QMPTDYRQLAQQAQRLSVNFRFQEGSATLDNKAHRDLQRVLDYLRQHDKLQNKVVLVGFG 397 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--A 330 D A LS RA + + L K GV +I+G A+D N Sbjct: 398 DPKNDPERAEL---LSKLRAMAVRRELAKQGVL---FREITGLGSELPVAANDQDNGRIR 451 Query: 331 NRRIDILV 338 NRR+++ V Sbjct: 452 NRRVEVWV 459 >gi|153952261|ref|YP_001398613.1| flagellar motor protein MotB [Campylobacter jejuni subsp. doylei 269.97] gi|152939707|gb|ABS44448.1| putative chemotaxis protein MotB [Campylobacter jejuni subsp. doylei 269.97] Length = 247 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 64/186 (34%), Gaps = 5/186 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ +W I+ T+ +A++ F T Sbjct: 3 KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTST 61 Query: 79 ASKGIFDEQNPPERSSQNKID----LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + + + + + +T+ ++ + + Q N + Sbjct: 62 QTVKEESKTQKKYKGAAKEESDELKSLKQMTMTQQETIKRLQAALDQSDNQIALNLPSKV 121 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + S ++ +D K + ++ + Y S + + ++ Sbjct: 122 EFERSSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIRSYELAYQRAENV 181 Query: 195 LAKKIS 200 L I Sbjct: 182 LKYFIE 187 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 15/177 (8%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + + K K A + L+ L + + + + + Sbjct: 57 DYTSTQTVKEESKTQKKYKGAAKEESDELKSLKQMTMTQQETIKRLQAA----LDQSDNQ 112 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNI 280 I +++ + F++SS+ + I K L I IRG+TD S Sbjct: 113 IALNLPSKVE---FERSSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIR 169 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + L+ RA + + ++ G + I I + + + P N R++I Sbjct: 170 SY---ELAYQRAENVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQALENNRVEIY 221 >gi|89889717|ref|ZP_01201228.1| hypothetical protein BBFL7_01535 [Flavobacteria bacterium BBFL7] gi|89517990|gb|EAS20646.1| hypothetical protein BBFL7_01535 [Flavobacteria bacterium BBFL7] Length = 352 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 10/116 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR--- 286 + +F K S L E+ +L ++ E+L + I GH N Sbjct: 235 RLENILFYKGRSTILEESQPLLDRVAEILIAREDIHFEIHGHVCCINPAYPDAYNRDTKK 294 Query: 287 --LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 LS RA + Y++L GV R+ + G+ R D ++ RR+++ + Sbjct: 295 SNLSHARALAIYKILRSRGVKHTRM-RFKGYGRTRPLGGIDKLD---RRVELYITK 346 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 34/111 (30%), Gaps = 10/111 (9%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 ++ FD L + L + I G+ D N LS R Sbjct: 24 HSVYFDVDKDQFSFSEGKQLTSFFDDLIYKPILTVKILGYCDDR---GSHEYNLDLSNRR 80 Query: 292 AYSAYQVLMKSGVSEDRIS-KISGFAH---HRLKIASDPM--NSANRRIDI 336 + + L + + IS K+ G + + NRR+D+ Sbjct: 81 VETVSEWLENHDIELENISKKVEGLGEVALEDELDFQETEEIRAQNRRVDV 131 >gi|42524629|ref|NP_970009.1| chemotaxis MotB protein [Bdellovibrio bacteriovorus HD100] gi|39576839|emb|CAE78068.1| chemotaxis MotB protein [Bdellovibrio bacteriovorus HD100] Length = 318 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 2/68 (2%) Query: 10 ENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYF 69 E Q I+IKK + + GSWK+ ADFMT LMAFFLVMW++ ++TKKA+ YF Sbjct: 3 EKKQTIVIKKIIVSGGGHH-GGSWKVALADFMTALMAFFLVMWLVGQ-SEETKKAVSDYF 60 Query: 70 NPFGKNLM 77 + Sbjct: 61 STPSVIEY 68 >gi|302532142|ref|ZP_07284484.1| type VI secretion system OmpA/MotB [Streptomyces sp. C] gi|302441037|gb|EFL12853.1| type VI secretion system OmpA/MotB [Streptomyces sp. C] Length = 214 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 41/109 (37%), Gaps = 8/109 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290 ++ +F K S+ + ++ + + + + + G TD LS Sbjct: 102 QSEVLFAKDSAELSGAAGARIAEVAQEIRQNSPRKVMVCGFTDNL---GTYAHGKTLSTQ 158 Query: 291 RAYSAYQVLMKSGVSEDRIS-KISGFAHHRLKIASDPMNSA--NRRIDI 336 RA + ++ L +S I+ ++ G + + NRR++I Sbjct: 159 RAEAVHKALAAQ-LSASGIAYEVVGKSEDDPIADNSTEEGRKKNRRVEI 206 >gi|237800676|ref|ZP_04589137.1| OmpA family protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023535|gb|EGI03592.1| OmpA family protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 446 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 29/244 (11%), Positives = 69/244 (28%), Gaps = 18/244 (7%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + V + +++ + + +E + Sbjct: 216 FESSEQLSDEVSKDVNGIGFTGLPSVRHARAVAIADGESRPMLPTTSLIATEDYPLSRRL 275 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + + R +A+ + + A Sbjct: 276 YLYVPPAGHQRWAQALVHFAQSADGQAIVARSGFVAQTVQALKVQPTAQMPADYQALTRK 335 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPF 277 + ++ F + S+ + L+++ + L + +++ G DA Sbjct: 336 ADRLSVNFR-------FAQGSARLDNKAQQDLKRVADYLKAQDKLDQHVTLVGFGDAKSD 388 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRID 335 A LS RA + + L+KSGV+ +I G +D + NRR++ Sbjct: 389 PARATL---LSRLRAMAVRRELLKSGVT---FREILGLGDEMPVANNDIDDGRIKNRRVE 442 Query: 336 ILVE 339 + V+ Sbjct: 443 VWVQ 446 >gi|311277854|ref|YP_003940085.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1] gi|308747049|gb|ADO46801.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1] Length = 347 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 45/120 (37%), Gaps = 17/120 (14%) Query: 232 RNTPMFDKSSSIPLPE---TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS 288 ++ MF S+ E I L ++ + + + G++D + A N LS Sbjct: 229 KSDVMFGYDSATLTNEGKAAINQLYHSPDLQSATGNTTLVIGYSDRT---GSASYNQALS 285 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNS-AN-----RRIDILV 338 RA + + L+ G+S + I + G + ++ N RR+ + + Sbjct: 286 ARRAQAVAEQLIGLGMSAENI-RTEGRGATDSVTGNTCDNMTGSALKNCLSPDRRVVVQI 344 >gi|257487833|ref|ZP_05641874.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008545|gb|EGH88601.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 447 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 11/168 (6%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + ++ + Q + + + A + + Sbjct: 286 QRWAQALVRFAQSAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFR 345 Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + S+ + L+++ E L + +++ G DA A LS RA Sbjct: 346 FAQGSAKLDNKAQQDLKRVAEYLKTSNQLNQHVTLVGFGDAKSDPARAAL---LSRLRAM 402 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 + + L+KSGV+ I G + D NRR+++ V+ Sbjct: 403 AVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447 >gi|117925243|ref|YP_865860.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1] gi|117608999|gb|ABK44454.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1] Length = 257 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 64/194 (32%), Gaps = 15/194 (7%) Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKG 214 K D E+ +P + + L L +K+ + L +V + + Sbjct: 46 KVSGSMKDAFGVQRIEQINAIPTGNTIIAPEFASEMVLVQLREKVENVLGPMVDNGEAEM 105 Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST----EVISIRG 270 + + S F + L +I +L I I Sbjct: 106 YTDQDGFVMQIDS------DTTFVPGTLQLSDTFQAKLTEICNILTTHPDTKNNKIRIIA 159 Query: 271 HTDASPFRNIA-RDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPM- 327 HTD +P NW LS +A + + + GV R+ ++ K ++D Sbjct: 160 HTDTTPPPGGMLPTNWALSAAQAAAVVGYMSTQGGVDPVRL-EVRAKGEFAPKESNDTAD 218 Query: 328 -NSANRRIDILVED 340 S NRRI+IL+ Sbjct: 219 GRSKNRRIEILISR 232 >gi|327480142|gb|AEA83452.1| putative outer membrane protein [Pseudomonas stutzeri DSM 4166] Length = 209 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 11/167 (6%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 ++K + + L + E ++++ Sbjct: 20 SSKGEKKPSEAAAPVAPKVDYAWLDEYEPKLRDALVDSRFEVERRDNVLVVT---APVDS 76 Query: 236 MFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ L + L + I GH D++ N +S +RA Sbjct: 77 SFNPDRPGMLLPVTLGPITRVAKLVEKDEKTAVVILGHADST---GADDVNRTISRERAS 133 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + + SG DR+ +I G + A+D NRR+++++ Sbjct: 134 AVAAIFRLSGFKHDRL-RIRGLGSDMPRAANDSKEGRAMNRRVEMVL 179 >gi|315057756|gb|ADT72085.1| Flagellar motor rotation protein MotB [Campylobacter jejuni subsp. jejuni S3] Length = 247 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 66/186 (35%), Gaps = 5/186 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ +W I+ T+ +A++ F T Sbjct: 3 KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTST 61 Query: 79 AS----KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 + ++ + +++ +T+ ++ + + Q N + Sbjct: 62 QTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAALDQSDNQVALNLPSKV 121 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + S ++ +D K + ++ + Y S + + ++ Sbjct: 122 EFERGSAQIVSADIQDYLKRIAELTTYLPPQAKIEIRGYTDNSDSIIRSYELAYQRAENV 181 Query: 195 LAKKIS 200 L I Sbjct: 182 LKYFIE 187 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 15/177 (8%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + + K K A + L+ L + + + + + Sbjct: 57 DYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQAA----LDQSDNQ 112 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNI 280 + +++ + F++ S+ + I K L I IRG+TD S Sbjct: 113 VALNLPSKVE---FERGSAQIVSADIQDYLKRIAELTTYLPPQAKIEIRGYTDNSDSIIR 169 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + L+ RA + + ++ G + I I + + + P N R++I Sbjct: 170 SY---ELAYQRAENVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQALENNRVEIY 221 >gi|71734119|ref|YP_274824.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554672|gb|AAZ33883.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 447 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 11/168 (6%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + ++ + Q + + + A + + Sbjct: 286 QRWAQALVRFAQSAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFR 345 Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + S+ + L+++ E L + +++ G DA A LS RA Sbjct: 346 FAQGSARLDNKAQQDLKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAAL---LSRLRAM 402 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 + + L+KSGV+ I G + D NRR+++ V+ Sbjct: 403 AVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447 >gi|146340837|ref|YP_001205885.1| hypothetical protein BRADO3900 [Bradyrhizobium sp. ORS278] gi|146193643|emb|CAL77660.1| conserved hypothetical protein; putative outer membrane protein with periplasmic-binding domain (ABC-type) [Bradyrhizobium sp. ORS278] Length = 550 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 8/131 (6%) Query: 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRG 270 K + + F +S L ++ + L + + + + G Sbjct: 393 AKWTGNPQEFCRLRTQARALDVSFRFQTNSVELDNLAAPNLFRVMQALRETPQARLLLAG 452 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-S 329 D + N RLSL RA S Q L GVS G+ + Sbjct: 453 FADRR---GNYQANCRLSLQRAESVKQSLASLGVSN---VDTRGYCDEVPVRDNGGDEFE 506 Query: 330 ANRRIDILVED 340 NRR++I + Sbjct: 507 KNRRVEIYLLS 517 >gi|86358030|ref|YP_469922.1| OmpA family membrane protein [Rhizobium etli CFN 42] gi|86282132|gb|ABC91195.1| putative outer membrane protein, OmpA family [Rhizobium etli CFN 42] Length = 738 Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 62/185 (33%), Gaps = 13/185 (7%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 D ++ + LPP+ L D + LS + + + + Sbjct: 544 EDPDRGYFDDPGADLPPMRLRVPLNDYIIDTSSDPDRDYYEFLSEPPVEQVERVYSLDEV 603 Query: 221 RTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHT 272 R I +T F S+ L+K+ + + +E I GHT Sbjct: 604 RYSARIRDKVRRIDLDTITFATGSAEIPMTQARTLRKVADAINQVLKKDPSETFLIEGHT 663 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSAN 331 DA + N LS RA S VL G+ + + G+ LK+ + N Sbjct: 664 DAV---GSDQSNLVLSDQRAESVANVLSDVYGIPPENM-ATQGYGERYLKVNTPGPEQEN 719 Query: 332 RRIDI 336 RR+ I Sbjct: 720 RRVTI 724 >gi|330985312|gb|EGH83415.1| OmpA family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 447 Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 11/168 (6%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + ++ + Q + + + A + + Sbjct: 286 QRWAQALVRFAQSAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFR 345 Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + S+ + L+++ E L + +++ G DA A LS RA Sbjct: 346 FAQGSARLDNKAQQDLKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAAL---LSRLRAM 402 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 + + L+KSGV+ I G + D NRR+++ V+ Sbjct: 403 AVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447 >gi|221134028|ref|ZP_03560333.1| outer membrane protein [Glaciecola sp. HTCC2999] Length = 249 Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 69/235 (29%), Gaps = 18/235 (7%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 T S ++ + + + + + G L E Sbjct: 18 SFTSISASAQVADAVTTYKNEPATTHTNIGFGTGLVAGAALGGPVGAIIGATLGVLMVEE 77 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + ++ L + + + L + + + T Sbjct: 78 HNDDQHIATLKTDLLAAYDHHQTQAQTIAQLQQMVDE-----------PVIQQVNYTTPS 126 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARD 283 + + ++ F S L + +VL +++ G D R D Sbjct: 127 VFDFPEMQSHIQFTTGISEVASAYHGQLALLAQVLTKQPQLQVTLTGFAD---LRGTDDD 183 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 N LS R + +L+K GVSED+I I+ R S+ S +RR+ I Sbjct: 184 NLALSSARVAAVKSMLVKEGVSEDQIKTIA-LGEARALQTSNWDESLVFDRRVTI 237 >gi|300716387|ref|YP_003741190.1| outer membrane protein [Erwinia billingiae Eb661] gi|299062223|emb|CAX59340.1| predicted outer membrane protein [Erwinia billingiae Eb661] Length = 294 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 33/279 (11%), Positives = 76/279 (27%), Gaps = 23/279 (8%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 ++A G F Q K I + ++Q + Sbjct: 22 VAVSAPAGTFYGQAYQPGMGVGKQQAQIIYFRAADVAGESAAHVYVDGEFQNALLTNSFT 81 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + ++ + + + + + + + Sbjct: 82 RFCVSPGEHRLGAYQNDAPNYKGKTLAPKMALSGGKTYFMQVGSAADGRPVEVSEAQAES 141 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS---SSIPLPETIVV 251 + K + + L + V+ + ++S +F P+ Sbjct: 142 VLKGLHQQVHVLSRASAVQSCQLQPEYKEYVLS-----GDVLFKFGKSMRHDMTPQGRQA 196 Query: 252 LQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + K+ L + I + GHTD N+ L RA + ++L+ G+ Sbjct: 197 VGKLIGQLHEDHVNLDSIEVIGHTDPI---GKESSNYALGARRASTVREMLIDGGLPAAN 253 Query: 309 ISKISGFAHHRLKIASDPMNSA--------NRRIDILVE 339 I S + +AS + +RR+ + V+ Sbjct: 254 IQATSA-GSSQPLVASCSGSRQAQAACYAPDRRVVVRVK 291 >gi|49258621|pdb|1R1M|A Chain A, Structure Of The Ompa-Like Domain Of Rmpm From Neisseria Meningitidis Length = 164 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F E L+ + + L + + + + GHTD F + N LS RAY Sbjct: 18 LFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTD---FMGSDKYNQALSERRAYV 74 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 L+ +GV RIS + G + Sbjct: 75 VANNLVSNGVPVSRISAV-GLGESQ 98 >gi|320324614|gb|EFW80691.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. B076] Length = 447 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 11/168 (6%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + ++ + Q + + + A + + Sbjct: 286 QRWAQALVRFAQSAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFR 345 Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + S+ + L+++ E L + +++ G DA A LS RA Sbjct: 346 FAQGSARLDNKAQQDLKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAAL---LSRLRAM 402 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 + + L+KSGV+ I G + D NRR+++ V+ Sbjct: 403 AVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447 >gi|291615184|ref|YP_003525341.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1] gi|291585296|gb|ADE12954.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1] Length = 185 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 7/82 (8%) Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + GHTD+ A N LS RA + L+ GV I + G ++ Sbjct: 107 QKGFKFIVSGHTDS---SGDATKNKELSARRARVMVKELIAQGVDAGDIEAV-GMGSEKM 162 Query: 321 KI-ASDPMN--SANRRIDILVE 339 + + + NRR ++ V Sbjct: 163 LVKPDNTPAKKAKNRRYEVQVR 184 >gi|330827372|ref|YP_004390610.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans K601] gi|329312680|gb|AEB87094.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601] Length = 351 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 31/267 (11%), Positives = 74/267 (27%), Gaps = 12/267 (4%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 L + +S ++ + + + ++ + Sbjct: 83 ALHPGTPFWPAPVTWALGASMLAAGVTGCAPMPPEQPRVLLMGAPVLTGLAQVRDPQTGT 142 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 C + G K+ + + L L + + + Sbjct: 143 DYFVPCNPCAAPTPKTPMLGSTDAAPEATGKAAARPQPSVLAKLDAHTVATLAIRAEADA 202 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVLQ 253 + + + V V + + + F S + E L Sbjct: 203 IPAGSAQLTDDVRP---VTVVAVGPATAAPVAATASSSLRSLPFSSSVANLNDEAKRNLS 259 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 ++ LA + E + IRG TD++ N L++ RA + + GV ++ Sbjct: 260 ELLP-LAMTAERVLIRGRTDST---GTVAGNRALAIARAATVRAAFARGGVDPRKLK--V 313 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILV 338 + ++D NRR+++ + Sbjct: 314 SYCVTCFVASNDTEAGRSANRRVEVEL 340 >gi|284050116|ref|ZP_06380326.1| hypothetical protein AplaP_01445 [Arthrospira platensis str. Paraca] Length = 179 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 7/118 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + ++ ++ + + I + N F+ S+ P+ + ++ KI E L Sbjct: 36 AQIIPAAFENIPGIKSVFSTLKIDPVRIENRIYFNSGSAQLNPQDLQIITKIQEFLDRYP 95 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + I GHTD R A N +L+L+RA + L K G+ R+ + + + Sbjct: 96 QLSLRIIGHTD---LRGNAARNQQLALNRAIAVRDALTKQGIDPKRLEVV---GNSQP 147 >gi|194295652|gb|ACF40853.1| outer membrane protein [Riemerella anatipestifer] Length = 270 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 62/248 (25%), Gaps = 21/248 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D T + ++N Sbjct: 42 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCSETPGLPKFQGCPDTDGDGVPDKDDNCP 101 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 102 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 145 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + E+ L Sbjct: 146 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRSESNTKL 205 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GHTD + A N +LS +RA S L GV+ ++ Sbjct: 206 DQAAEVIKSSNGGTFLVVGHTD---VKGNANYNLKLSRERAASVVAALEARGVNPSQLKS 262 Query: 312 ISGFAHHR 319 G Sbjct: 263 -KGVGSAE 269 >gi|163731712|ref|ZP_02139159.1| hypothetical protein RLO149_20449 [Roseobacter litoralis Och 149] gi|161395166|gb|EDQ19488.1| hypothetical protein RLO149_20449 [Roseobacter litoralis Och 149] Length = 344 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 42/328 (12%), Positives = 98/328 (29%), Gaps = 25/328 (7%) Query: 20 KVAIDDTPNNLGSWKIVYADF-MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 + S I D +++L +++ + + + L Sbjct: 5 RHHARYGDEEDESAFISMTDMTVSILFIVLILLAFFASQLRPEQTVTVSEYERVVAQLDE 64 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + Q+ E + +D++ + ++ + L TN + + R E+ + + Sbjct: 65 REAQLRVAQSAIEDWTDGTLDVATLLRLREDVLRLTTEVTNLQARAGRSEDLEQDIVVLR 124 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 + + + E ++ + + +++E R +D + Sbjct: 125 EELNRARTQLSLIEVNPLEMYNSSVAQERENLLTSLRDQIAEEFPELGVRVSDGKDALQF 184 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 L + + G + I D + + Sbjct: 185 QGEGLFASGSPRLSAGSQIKIE------RIADLIHAVL-----PCYTMGPQSAYDAQCNP 233 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS--GVSEDR------IS 310 E + I GHTD+ A N LS RA + Y ++ G++ + + Sbjct: 234 SFAIVEALQIEGHTDSD---GSANANVSLSSQRAATTYGAMISHQPGLNIHQNFTDQPVL 290 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDI 336 ++G+ R + NRRID+ Sbjct: 291 SVAGYGEDRPVTLNSSPEGKSANRRIDL 318 >gi|330890787|gb|EGH23448.1| OmpA family protein [Pseudomonas syringae pv. mori str. 301020] Length = 447 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 11/168 (6%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + ++ + Q + + + A + + Sbjct: 286 QRWAQALVRFAQSAEGQAIVAQSGFVAQTVQALKVQPTAQMPADYQALARKAERLSVNFR 345 Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + S+ + L+++ E L + +++ G DA A LS RA Sbjct: 346 FAQGSARLDNKAQQDLKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAAL---LSRLRAM 402 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 + + L+KSGV+ I G + D NRR+++ V+ Sbjct: 403 AVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447 >gi|91218699|ref|ZP_01255595.1| probable outer membrane protein [Psychroflexus torquis ATCC 700755] gi|91183150|gb|EAS69597.1| probable outer membrane protein [Psychroflexus torquis ATCC 700755] Length = 197 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 13/105 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD P+ V LQKI + I +R HTD+ N LS RA + Sbjct: 97 FDLDKFQIRPDAEVELQKIIVAMKSYPNLRIDVRSHTDSR---AGDEYNQILSNKRAKAT 153 Query: 296 YQVLMKSG-VSEDRISKISGFAHHRLKIA-------SDPMNSANR 332 +++ +S +RI G+ +L S+ ++ NR Sbjct: 154 INYIIEKSRISSERI-SGRGYGESQLVNKCSNGIDCSESEHALNR 197 >gi|170726476|ref|YP_001760502.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908] gi|169811823|gb|ACA86407.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908] Length = 238 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 54/193 (27%), Gaps = 20/193 (10%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 G + T + ++ + + K+ L +A + L Sbjct: 50 GPVGAIIGAFTGALLGKSVGDDSEIDAQHAKIAALSSDKQSLLVIADQYDEAQQQLAELK 109 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIR 269 + + G+ I F SS P L + + S E + + Sbjct: 110 LAQDQKLTELAMGLNIQ---------FKTGSSELAPHIKRQLDDLAYAITISPELRLDMT 160 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 G+ D + N LS R L+ GV E R+ F Sbjct: 161 GYADRR---GDSTYNQALSEQRVAEVKSYLVSQGVDESRL-SYKAFGASAPLTEDQSFE- 215 Query: 330 AN----RRIDILV 338 N RR++I + Sbjct: 216 -NDFFDRRVNIKL 227 >gi|308273805|emb|CBX30406.1| hypothetical protein N47_Q17290 [uncultured Desulfobacterium sp.] Length = 185 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 5/95 (5%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSL 289 Q FD S+ E+ ++ I + + + GHTD N+ LS+ Sbjct: 78 QSFILYFDFDSNNLTAESNKLIDDILQAIKERDSQDIPVVGHTDR---AGNPDYNFSLSM 134 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 RA + +L+ G+ + +IS I + Sbjct: 135 QRATAVRDLLVNRGIKSE-FIQISSHGEGNPLIPT 168 >gi|307266869|ref|ZP_07548390.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918116|gb|EFN48369.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 230 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 25/183 (13%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + +K ++ DL + + L+ + + IS + FD Sbjct: 37 AAIAAELSLQKAKVDDLIGVRARIIDQLLKEFSNSDMTLNIDPQTGAISFSE---GVFFD 93 Query: 239 KSSSIPLPETIVVLQK---------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 K E L + + I + GHTD + N LS Sbjct: 94 KDKFELKEEGKRYLNEFIPRYLSILMDPRFKKYISQIIVEGHTDDT---GDYMYNLELSQ 150 Query: 290 DRAYSAYQVLMK---SGVSED------RISKISGFAHHRLKIASDP-MNSANRRIDILVE 339 RA+ + +++ G+ +G ++ +L I + +RR++ Sbjct: 151 KRAFEVVRYILQSNIKGIDSKTKADLMSYITANGRSYSQLIIENGKVNRQKSRRVEFKFR 210 Query: 340 DRQ 342 ++ Sbjct: 211 LKE 213 >gi|110635499|ref|YP_675707.1| OmpA/MotB [Mesorhizobium sp. BNC1] gi|110286483|gb|ABG64542.1| OmpA/MotB [Chelativorans sp. BNC1] Length = 172 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS+ + L + + L ++ GH D N L R Sbjct: 63 DRIFFDTDSSVIRADAQATLARQAQWLNQYPSYSVTVEGHADER---GTREYNLALGARR 119 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A +A L+ GV+ +RI IS + R S NRR + V + G Sbjct: 120 AAAARDFLVSRGVAANRIQTIS-YGKERPVAVCDDISCWSQNRRA-VTVLNGAG 171 >gi|317180858|dbj|BAJ58644.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori F32] Length = 179 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD L +I + + + + G+TD + N L + R S Sbjct: 78 FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L+ GV +D I IS F + K NRR+D+ + Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCIQKTRECYKENRRVDVKL 177 >gi|313681893|ref|YP_004059631.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994] gi|313154753|gb|ADR33431.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994] Length = 177 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 8/105 (7%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +FD + + K ++ T I + G+ D N+ L L RA S Sbjct: 78 LFDYDKFDIRADMQDAMAKNALLVKGKT--IKLEGNCDEF---GSDEYNFALGLKRANSV 132 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 L+ SG+S D I +S NRR+D + Sbjct: 133 KAALVNSGISADSI-AMSSLGESNPVCLEKSKDCWQKNRRVDFKL 176 >gi|92119081|ref|YP_578810.1| OmpA/MotB [Nitrobacter hamburgensis X14] gi|91801975|gb|ABE64350.1| OmpA/MotB [Nitrobacter hamburgensis X14] Length = 673 Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285 +T F S P+ L+ I + + +EV I GHTDA DN Sbjct: 546 DLDTITFATGSWDIPPDQAAKLRVIADGINRAISRNPSEVFLIEGHTDAV---GNDVDNL 602 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA SA ++L + V + + G+ LK+ +D + NRR+ + Sbjct: 603 SLSDRRAQSAAELLTQQFQVPPENLVT-QGYGEQNLKVETDGPSRENRRVTV 653 >gi|89073378|ref|ZP_01159902.1| hypothetical protein SKA34_20552 [Photobacterium sp. SKA34] gi|89050865|gb|EAR56339.1| hypothetical protein SKA34_20552 [Photobacterium sp. SKA34] Length = 166 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 7/100 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD ++ PE I L + + I I GHTD ++ N LSL R+++ Sbjct: 63 FDFDKAVLKPEDIKELDDFIAKIHSLSGDILIAGHTD---YQGSDSYNEALSLRRSHAIE 119 Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKIASDP--MNSANRR 333 L + E ++ F + N+ NRR Sbjct: 120 SYLKAR-IDESHYHFEVKYFGEKNPIVKGHSLKSNALNRR 158 >gi|259908602|ref|YP_002648958.1| OmpA family protein [Erwinia pyrifoliae Ep1/96] gi|224964224|emb|CAX55731.1| OmpA family protein [Erwinia pyrifoliae Ep1/96] gi|283478573|emb|CAY74489.1| putative type VI secretion system, core protein [Erwinia pyrifoliae DSM 12163] Length = 407 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 48/138 (34%), Gaps = 9/138 (6%) Query: 210 NIVKGVLFETTRTGILISIIDQRN------TPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 ++ + + + I+ D N +F + PE ++ ++ + Sbjct: 254 DLRQRLSDLIASHQLNITDGDDGNKVILPIDSLFSPPGAELTPEGRALIARVASAMESLK 313 Query: 264 EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I +TD + N S +A + ++++ + G + + Sbjct: 314 GTLLIAVYTDNRLLPSTQFMSNDEYSAAQAQAIGTMMLQLIAQPCINVRAEGRGDSQGLL 373 Query: 323 ASDPM--NSANRRIDILV 338 ++ + NRR++I + Sbjct: 374 PNNSASNRTQNRRVEITL 391 >gi|90579127|ref|ZP_01234937.1| hypothetical protein VAS14_05458 [Vibrio angustum S14] gi|90439960|gb|EAS65141.1| hypothetical protein VAS14_05458 [Vibrio angustum S14] Length = 166 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 7/100 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD ++ PE I L + + I I GHTD ++ N LSL R++ Sbjct: 63 FDFDKAVLKPEDIKELDDFIAKIQLLSGDILIAGHTD---YQGSDSYNEALSLRRSHVIE 119 Query: 297 QVLMKSGVSEDRI-SKISGFAHHRLKIASDP--MNSANRR 333 + L + E ++ F + N+ NRR Sbjct: 120 RYLKAR-IDESHYHFEVKYFGEKNPIVKGHSLKANALNRR 158 >gi|223041650|ref|ZP_03611847.1| hypothetical protein AM202_0258 [Actinobacillus minor 202] gi|223017514|gb|EEF15928.1| hypothetical protein AM202_0258 [Actinobacillus minor 202] Length = 162 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 14/114 (12%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD S+ + L I + + + + +++ G+TD A N +LS R Sbjct: 52 GDFLFDFDKSVLSAKGKSTLNGIAKEIKDTGAKNVTVTGYTDRL---GSATYNQKLSQAR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSA------NRRIDIL 337 A + L GVS + I + G A + + NRR+ I+ Sbjct: 109 ANTTKAYLQSQGVSAN-IKAV-GRGAANQVKACKGETGQALKDCLKPNRRVHII 160 >gi|15606304|ref|NP_213683.1| flagellar motor protein MotB-like [Aquifex aeolicus VF5] gi|2983508|gb|AAC07085.1| flagellar motor protein MotB-like [Aquifex aeolicus VF5] Length = 224 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 51/157 (32%), Gaps = 18/157 (11%) Query: 197 KKISSTLSGLVADNIVKGV-LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 K + + ++ + I + + D+ F+ + L++I Sbjct: 72 KDYAVKIKKRISKVLPPWAYQVVVAEEYIKLRLFDR---IFFENGDYKLTEKGRKTLEEI 128 Query: 256 GE---VLAHSTEVISIRGHT-DASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRIS 310 L+ I + GH +N N W L+ RA + L GV D++ Sbjct: 129 APLLIALSDEISSIRVEGHVGPTVEIKNPIIRNKWELAGRRATEVIRYLENRGVPHDKLV 188 Query: 311 KISGFAHHRLKIASDPMNS-----ANRRIDILVEDRQ 342 +S + R N R++I + ++ Sbjct: 189 AVS-YGDKRPLYR---WRQSVLIERNNRVEINIYVKR 221 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 28/68 (41%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASK 81 + +W ++D M++L+ FF++++ ++ + + YF + + Sbjct: 4 KKKEECPKPPAWLTSFSDLMSLLLTFFILLYAMSTLEIPALEKFLSYFRKNPELYPPKNS 63 Query: 82 GIFDEQNP 89 + +P Sbjct: 64 VVPPITHP 71 >gi|329962616|ref|ZP_08300564.1| OmpA family protein [Bacteroides fluxus YIT 12057] gi|328529647|gb|EGF56545.1| OmpA family protein [Bacteroides fluxus YIT 12057] Length = 397 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 55/188 (29%), Gaps = 5/188 (2%) Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + LS + + D L + L P + Sbjct: 187 ISNAMDINLELSAMGVEDKFDGEVGGDHGYDGVLSATVGLTYRFPARGFRRPMPQLVSQA 246 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + +L +L + L + + V IL T F+ S+ Sbjct: 247 ELAIMQDQLAELGA-ANQQLQNALTAAQNQPVEEVAETEVILTDPDIAPRTVFFNIGSAE 305 Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + L + + + ++ G+ D+ N LSL RA + VL+K Sbjct: 306 VSAREAMNLSYLADQMKQFPNATYTVNGYADS--ATGTPAFNKELSLKRAQAVVDVLVKQ 363 Query: 303 -GVSEDRI 309 G+ DR+ Sbjct: 364 YGIPADRL 371 >gi|85706953|ref|ZP_01038043.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius sp. 217] gi|85668564|gb|EAQ23435.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius sp. 217] Length = 630 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 16/245 (6%) Query: 96 NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155 D + + ++ + + + + + I + ++ + + D + Sbjct: 382 KDDDALLRQPGSEVRTERFSDGSTRSNVMRADGSEIITIRDATGRVLRRVQVDPDGREYL 441 Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + E + + + + R LA + + V Sbjct: 442 LFDDTRSFEPVEVRNLPKPAYDSFDYQAASDRDALRRALLAADRGDIDRTFSLRQVRETV 501 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRG 270 I + F +S+ P L+++G ++ TE+ I G Sbjct: 502 EVRQMSPEINLQ------NVTFATASAAIQPSQAENLREMGVMMRDLIAEDPTELFLIEG 555 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNS 329 +TDA N LS RA S + V + + + G+ LKI + Sbjct: 556 YTDAVGAPG---YNLLLSDRRAESVALAFSEYFDVPAENMV-VQGYGESYLKIPTQEAER 611 Query: 330 ANRRI 334 NRR+ Sbjct: 612 LNRRV 616 >gi|310767498|gb|ADP12448.1| OmpA family protein [Erwinia sp. Ejp617] Length = 407 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 48/138 (34%), Gaps = 9/138 (6%) Query: 210 NIVKGVLFETTRTGILISIIDQRN------TPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 ++ + + + I+ D N +F + PE ++ ++ + Sbjct: 254 DLRQRLSDLIASHQLNITDGDDGNKVILPIDSLFSPPGAELTPEGRALIARVASAMESLK 313 Query: 264 EVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 + I +TD + N S +A + ++++ + G + + Sbjct: 314 GTLLIAVYTDNRLLPSTQFMSNDEYSAAQAQAIGTMMLQLIAQPCINVRAEGRGDSQGLL 373 Query: 323 ASDPM--NSANRRIDILV 338 ++ + NRR++I + Sbjct: 374 PNNSASNRTQNRRVEITL 391 >gi|171059731|ref|YP_001792080.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6] gi|170777176|gb|ACB35315.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6] Length = 534 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 77/292 (26%), Gaps = 30/292 (10%) Query: 69 FNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLE 128 D +N + +S + + +DL T+ ++ Sbjct: 235 ITDVPGTSTGTPNTPVDWRNITDSNSITPANPAGTVGTEGGRMDLMTTGTDGAPAGTYID 294 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSI--NKEENYFLPPLSKEKILAM 186 + +S++ L TD+ + + F E + Sbjct: 295 SMTANNPRGSAIGPNYVEHFGNSQQFGWLRSDTDVGPAQLWDYPNFSFDTNFDFETVAKG 354 Query: 187 KRKKRLQDLAKKISS-------TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + S F+ + FD Sbjct: 355 TDNQVVYGALEWGFQIRSGAVVATSEYARAGNDTSATFDEALERFRGYFTHEPIVIYFDT 414 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S P+ L I E L + + + I G D R + N+RLS RA + + Sbjct: 415 GSDQPMAGEEAKLDGIQEYLDNYPDATLGIDGFAD---IRGSEQFNFRLSDQRAQTVQAL 471 Query: 299 LMKSGVSEDRISKISGFAHH-------------RLKIASDPMNSA-NRRIDI 336 ++ G++ RI G + D NRR+ I Sbjct: 472 VLAEGIAAGRIDWAVGVGETQDFSQHGTAPGTAQPV---DAGRLRANRRVVI 520 >gi|116252498|ref|YP_768336.1| OmpA family protein [Rhizobium leguminosarum bv. viciae 3841] gi|115257146|emb|CAK08241.1| putative OmpA family protein [Rhizobium leguminosarum bv. viciae 3841] Length = 729 Score = 66.1 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285 +T F S+ L+K+ + + +E I GHTDA + N Sbjct: 608 DLDTITFATGSADIPMTQARTLRKVADAISQVLEKDPSETFLIEGHTDAV---GSDQSNL 664 Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA S VL G++ + + G+ LK+ + NRR+ I Sbjct: 665 ILSDQRAESVANVLSDVYGIAPENL-ATQGYGESYLKVNTSAPEQENRRVTI 715 >gi|332293116|ref|YP_004431725.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332171202|gb|AEE20457.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 429 Score = 65.8 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 6/113 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 I D F +S+ P ++ + + + + ++ + G+ D A N R Sbjct: 320 IEDGYVNVYFQFNSTKPETYSLESINYLIKYMTENSGASAQLVGYADEI---GNASSNQR 376 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMNSANRRIDILV 338 LS RA +++ +G+S DR+ ++G AS P RR+ + Sbjct: 377 LSEKRAQMVKDIMVAAGISADRL-SVTGNGEDASVDKASAPARQLVRRVTFKL 428 >gi|149920362|ref|ZP_01908832.1| OmpA domain protein [Plesiocystis pacifica SIR-1] gi|149818804|gb|EDM78246.1| OmpA domain protein [Plesiocystis pacifica SIR-1] Length = 225 Score = 65.8 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 I+ H D + R + +A + L++ GV+ +RI G+ R ++ Sbjct: 136 IQAHEDTVTADQHRYMSARPTQRQAEAVADFLIQKGVAAERIQA-RGYGEDRPIDTNETK 194 Query: 328 NSA--NRRIDILVEDR 341 NRR+D++ Sbjct: 195 EGRRHNRRVDLVFTAP 210 >gi|309783317|ref|ZP_07678027.1| OmpA family protein [Ralstonia sp. 5_7_47FAA] gi|308917861|gb|EFP63548.1| OmpA family protein [Ralstonia sp. 5_7_47FAA] Length = 351 Score = 65.8 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 31/267 (11%), Positives = 73/267 (27%), Gaps = 12/267 (4%) Query: 75 NLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYL 134 L + +S ++ + + + ++ + Sbjct: 83 ALHPGTPFWPAPVTWALGASMLAAGVTGCAPMPPEQPRVLLMGAPVLTGLAQVRDPQTGT 142 Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 C + G K+ + + L L + + Sbjct: 143 DYFVPCNPCAAPTPKTPMLGSTDAAPEATGKAAARPQPSVLAKLDAHTVATLAIPAEADA 202 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-FDKSSSIPLPETIVVLQ 253 + + + V V + + + F S + E L Sbjct: 203 IPAGSAQLTDDVRP---VTVVAVGPATAAPVAATASSSLRSLPFSSSVANLNDEAKRSLS 259 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 ++ LA + E + IRG TD++ N L++ RA + + GV ++ Sbjct: 260 ELLP-LAMTAERVLIRGRTDST---GTVAGNRALAIARAATVRAAFARGGVDPRKLK--V 313 Query: 314 GFAHHRLKIASDPMNSA--NRRIDILV 338 + ++D NRR+++ + Sbjct: 314 SYCVTCFVASNDTEAGRSANRRVEVEL 340 >gi|294083749|ref|YP_003550506.1| OmpA/MotB domain-containing protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663321|gb|ADE38422.1| OmpA/MotB domain protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 270 Score = 65.8 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 16/96 (16%) Query: 260 AHSTEVISIRGHTDASPFRNIAR------DNWRLSLDRAYSAYQVLMKSG------VSED 307 E I I GHTD SP R R N RLS RA + Y+ ++ S Sbjct: 151 RAFIESIFIEGHTDNSPIRGGLRGNVKINSNLRLSARRATNTYENMIAKKPVLEAFKSPK 210 Query: 308 R--ISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + +S + R + + NRRIDI + Sbjct: 211 NEPVFAVSAYGKTRPIDTNSTSSGKANNRRIDIRLL 246 >gi|38146952|gb|AAR11861.1| peptidoglycan-associated lipoprotein [Ehrlichia canis] Length = 147 Score = 65.8 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 12/109 (11%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 FD + +L+K+ + T + GHTD N L R Sbjct: 42 EKIYFDFGKATIGDSDKAILEKVIQKAQKDTNTNIVIVGHTDTR---GTDEYNLELGEQR 98 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMN-----SANR 332 A + +++ S + + +S+P + NR Sbjct: 99 ANAVKDFIIEHDKSLENRITVQSKGKSEPAVLVYSSNPEEAEHAHAKNR 147 >gi|88798991|ref|ZP_01114572.1| flagellar motor protein [Reinekea sp. MED297] gi|88778218|gb|EAR09412.1| flagellar motor protein [Reinekea sp. MED297] Length = 253 Score = 65.8 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 80/215 (37%), Gaps = 15/215 (6%) Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + +S + + D + D+ + E + Sbjct: 41 SSLQNDKFQEVSATLLQIFDVRPSSVDPIELNATPTGPDVFNPFFRPEPLPGTNIDNANS 100 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 ++ L D+ ++S + ++ D + + I I + N+ F +S+ Sbjct: 101 EVYAQESSLLDIQAQLSDAYAQMIQDRL---FSVSGNESWIEIQL---ANSITFSDNSAD 154 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + VL ++ ++L + + + G++ AS R W LS RA + + L ++G Sbjct: 155 INDQAEAVLYELAKLLQGNALPVRVEGYSGASEVRG-----WELSSSRAVAVVEYLQRAG 209 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 V+ +R+S + F+ ++ D RI I+V Sbjct: 210 VAGERLSSAA-FSSYQPSGEGDLTPG---RIQIVV 240 >gi|260426487|ref|ZP_05780466.1| outer membrane protein, OmpA/MotB family [Citreicella sp. SE45] gi|260420979|gb|EEX14230.1| outer membrane protein, OmpA/MotB family [Citreicella sp. SE45] Length = 695 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 69/222 (31%), Gaps = 12/222 (5%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + + ++ + + ++ TR G+ + D + N Sbjct: 467 DDGSTRSVVEYDDGNVVETVKAADGRVLRRTRTLPDGQSIVLFDDTQAETEVVVNDLPQT 526 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + + + + A + + + + + + ++ + F Sbjct: 527 TETPRRMNFQEVDETELAAALAAESGTSVDRTFSLNQIRNIDAVRHLVPEVSVDSIN--F 584 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST-----EVISIRGHTDASPFRNIARDNWRLSLDRA 292 + S+ PE L +G + EV I GHTDA N LS RA Sbjct: 585 ETGSAAIRPEEARALAALGNAMKQVIAERPGEVFLIEGHTDAV---GSWTYNLALSDRRA 641 Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333 S L + V + + + G+ L + SD NRR Sbjct: 642 ESVALALTEYFDVPPENMV-LQGYGEGDLAVQSDAAERENRR 682 >gi|163800821|ref|ZP_02194721.1| putative outer membrane protein [Vibrio sp. AND4] gi|159175170|gb|EDP59967.1| putative outer membrane protein [Vibrio sp. AND4] Length = 204 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 7/113 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 +F S + ++ E L I +RG+ + N LS RA Sbjct: 81 RILFSNDSDDVDTVYRRQIGELSEFLNEYPSTSIELRGYASKV---GGSEHNLDLSKRRA 137 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDRQG 343 + L+ G+ R+ +I G L + + ++ NRR+ V +G Sbjct: 138 SNVRTALLGYGIDPARV-RIVGLGDTHLEQQGTDEVSHALNRRVTASVIGYKG 189 >gi|298528936|ref|ZP_07016339.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510372|gb|EFI34275.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 223 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 61/162 (37%), Gaps = 9/162 (5%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 A++ + L + L V + ++ F S+ Sbjct: 67 QAVQNQSSSLQLQGLYTQAREKLSTPGAPVSVKMTEQGSVLI----SLFGEVFFSPGSAD 122 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMK- 301 PE+ LQ+I E+++ + + + G TD+ R + +S RA + L + Sbjct: 123 LNPESNKYLQQIAEIVSLAQGQVKVAGFTDSRENSVQGDRSIFEISAMRAARIGEELTRS 182 Query: 302 SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 G+ ++ + I G R ++ + + NRR++I + D Sbjct: 183 RGLRQENLV-IQGHGTPRPQVPENSPVGSEMNRRVEIRIVDS 223 >gi|212213380|ref|YP_002304316.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuG_Q212] gi|212011790|gb|ACJ19171.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuG_Q212] Length = 195 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 50/141 (35%), Gaps = 7/141 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + + ++ I + T FD S+ + ++ L Sbjct: 55 AQAYALAEGKGYQGQLKKDSEGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYL 114 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 A + + + G+TD N L R + ++L + GV+ +I +S + Sbjct: 115 ATHSTAKVRLEGNTDNR---GSREYNIGLGWRRDQAVARILEQEGVAPKQIDMVS-YGKE 170 Query: 319 RL--KIASDPMNSANRRIDIL 337 R ++ NRR++++ Sbjct: 171 RPAVIGNNENAWRLNRRVNLI 191 >gi|240950110|ref|ZP_04754405.1| lipoprotein Plp4/outer membrane protein and related peptidoglycan-associated (lipo)proteins [Actinobacillus minor NM305] gi|240295411|gb|EER46180.1| lipoprotein Plp4/outer membrane protein and related peptidoglycan-associated (lipo)proteins [Actinobacillus minor NM305] Length = 164 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 14/114 (12%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD S+ + L I + + + + +++ G+TD A N +LS R Sbjct: 54 GDFLFDFDKSVLSAQGKSTLNGIAKEIKEAGAKNVTVTGYTDRL---GSAAYNQKLSQAR 110 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSA------NRRIDIL 337 A + L GVS + I + G A + + NRR+ I+ Sbjct: 111 AATTKAYLQSQGVSAN-IKAV-GRGAANQVKACKGETGQALKDCLKPNRRVHII 162 >gi|256830739|ref|YP_003159467.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256579915|gb|ACU91051.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028] Length = 295 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 71/184 (38%), Gaps = 8/184 (4%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 KS+++ LP ++ L L ++ ++ ++V Sbjct: 91 PKIQYKSVSELSVKALPLGTETIPPQALAGSILDRLHDRLRDLIARDGLQDLVAVQSVPG 150 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN 279 +++ +F+KS ++ + L +GE+L + +S+ GH Sbjct: 151 KSLHVVL-----AGDLLFEKSRAVLRGDVKETLLAVGEILRSAPHALSVVGHAAPGGAAA 205 Query: 280 IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 +R W LS+ A L++ +G+ +R+ ++G+ R + D A R+++++ Sbjct: 206 GSRGPWELSVAMAADVADFLIRDAGLPAERML-VAGYGDQRPLVDGD-GAGAGWRVELVL 263 Query: 339 EDRQ 342 Sbjct: 264 SSEN 267 >gi|313191705|emb|CBW30518.1| putative outer membrane protein A [Bordetella petrii] Length = 161 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 5/82 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +LQ++ + I GHTD+ + N LS RA S Sbjct: 84 FFDFDKSTLKPEGRQLLQQVAQQAQGINLETIIAVGHTDSI---GTEQYNQGLSERRAAS 140 Query: 295 AYQVLMKSGVSEDRISKISGFA 316 L+ G+ +RI G Sbjct: 141 VKAYLVSLGIDPNRIYT-EGKG 161 >gi|149198154|ref|ZP_01875201.1| peptidoglycan-associated lipoprotein [Lentisphaera araneosa HTCC2155] gi|149138756|gb|EDM27162.1| peptidoglycan-associated lipoprotein [Lentisphaera araneosa HTCC2155] Length = 197 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 8/119 (6%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARDNWR 286 + F S+ +Q I E L + + G H D N Sbjct: 83 VAHDIEPVYFAFDSAAVRSAEDAKIQAIAEFLTSNPSFTLVIGGHCDER---GSDEYNRT 139 Query: 287 LSLDRAYSAYQVLMKSGVS-EDRISKISGFAHHRL-KIASDPMN-SANRRIDILVEDRQ 342 LS RA S + L+ + E RI ++ + + + +D + + NRR + V D Sbjct: 140 LSEKRALSVKESLLSASPDLEMRIETVA-YGEEKPAVVGADSQSYAKNRRAEFEVYDAN 197 >gi|226944962|ref|YP_002800035.1| periplasmic phosphate binding protein [Azotobacter vinelandii DJ] gi|226719889|gb|ACO79060.1| periplasmic phosphate binding protein [Azotobacter vinelandii DJ] Length = 428 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 85/286 (29%), Gaps = 13/286 (4%) Query: 58 DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 + T + + P A G FD + K L D ++S +L Sbjct: 150 EVKTWEKLGGRGGPIRLYARDARSGTFDTFHELVLEPWGK-TLDADARRFESSAELSASV 208 Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + + + + S E + L + + E P Sbjct: 209 SRDPAGIGFIGLPYVREAR-ALAISAGESRPMPPEPALVATEDYPLSRRLFLYERPRQPD 267 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 ++ + R Q+L ++ + A I + F Sbjct: 268 TWSRALIEFAQSPRGQELVERNGFVAQKVQAVRIAPHADMPPAYQQLARHARRLSVNFRF 327 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 + S++ + + ++++ L +++ G D P ++ R LS RA + Sbjct: 328 QEGSALLDNKALRDVERVLAYLREHGKLENSLALVGFGD--PKQDPERSTL-LSKLRALA 384 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + L + G + +I G + NRR+++ V Sbjct: 385 VRRELARGGAT---FREIIGLGDALPVADNGSEEGRLKNRRVEVWV 427 >gi|225872880|ref|YP_002754337.1| outer membrane protein A [Acidobacterium capsulatum ATCC 51196] gi|225792630|gb|ACO32720.1| outer membrane protein A [Acidobacterium capsulatum ATCC 51196] Length = 263 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 19/190 (10%), Positives = 61/190 (32%), Gaps = 6/190 (3%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + + L + T + + + + + K +++ + A++ + + + + Sbjct: 35 QTQPLVEQTHELNQVTAQNHREIQNVDKRAQSGIQQAQGAAQTAQQSADSANQSAQQAMS 94 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 + + + + F + ++ L ++ + + I T Sbjct: 95 QTNALSGVVSNLDNYQPVAQINVTFGFNKAVLSRGDKSKLDQLASQMGSTKGY--IVALT 152 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NS 329 ++ N +LS RA + + L V + + G ++ + Sbjct: 153 GSTDSTGTKAYNDQLSQRRAQAVERYLAATYHVPPYKFY-VLGLGKADEVASNRTASGRA 211 Query: 330 ANRRIDILVE 339 NRR+ + + Sbjct: 212 KNRRVQVQLL 221 >gi|260576195|ref|ZP_05844188.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] gi|259021675|gb|EEW24978.1| OmpA/MotB domain protein [Rhodobacter sp. SW2] Length = 507 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 52/176 (29%), Gaps = 11/176 (6%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 S + R Q + ++ + + +++ Sbjct: 323 ALPEAQASVAAAGYVDRAPERQPMTADGLRLINAIRGAGADVTLDDLKRLADLMVGADRL 382 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLS 288 T F+ S+ + L + +LA + + + G +D A N LS Sbjct: 383 SLTFRFEDGSTTLDAHSRDNLADLARLLAVGEFRGQDMVLAGFSD---GAGDAAANLALS 439 Query: 289 LDRAYSAYQVLMKS--GVSEDR-ISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 RA L K+ + E + + +I F NRR+++ + Sbjct: 440 QARAEGVLAALTKATPDLPEGQALPRIEAFGEALPMACDTTAAGRRLNRRVEVWLR 495 >gi|239979676|ref|ZP_04702200.1| secreted protein [Streptomyces albus J1074] Length = 186 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 44/108 (40%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + +F K S+ PE +Q I E + + G TD +LS + Sbjct: 63 QAEVLFGKDSAKLNPEARGRIQAIAEEAQAQQANKVRVFGFTDDL---GSYEHGKKLSKN 119 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 RA + ++ L+K+ + + ++ G++ + NRR+++ Sbjct: 120 RADAVHEELVKT-LGPNVTYEVRGYSEDYPIADNSTEAGRMKNRRVEV 166 >gi|238022549|ref|ZP_04602975.1| hypothetical protein GCWU000324_02457 [Kingella oralis ATCC 51147] gi|237867163|gb|EEP68205.1| hypothetical protein GCWU000324_02457 [Kingella oralis ATCC 51147] Length = 471 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 16/115 (13%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 ++ D T F S V+ + + + + + G+TD++ A N Sbjct: 366 VAYKDAVATFYFATGKSDVAAHADKVVADLIAA-GKNGKKLVVSGYTDST---GNAAANA 421 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN----RRIDI 336 LS RA + L K GV+ I + + + N RR+++ Sbjct: 422 ELSKKRAQAVKAFLEKQGVNAKNIEL------RKP--ENTTAAAGNNAQGRRVEV 468 >gi|148982298|ref|ZP_01816702.1| Outer membrane protein [Vibrionales bacterium SWAT-3] gi|145960547|gb|EDK25905.1| Outer membrane protein [Vibrionales bacterium SWAT-3] Length = 205 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292 +F +S+ P + ++++ L ++G+ A N LS +RA Sbjct: 84 HILFANNSTEINPAFLNQIRQMAAFLKRYESTTIELQGYASKV---GNAEHNLMLSKERA 140 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + + L+ +G+ R++ I G ++D Sbjct: 141 ANVRRALISNGIQPSRVN-IVGHGDAE-FSSNDTE 173 >gi|289577893|ref|YP_003476520.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9] gi|289527606|gb|ADD01958.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9] Length = 230 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 55/180 (30%), Gaps = 25/180 (13%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 +K ++ DL + + L + + IS + FDK Sbjct: 40 AAELSLQKAKVDDLIGVRARIIDQLFKEFSNSDMTLSIDPQTGAISFSE---GVFFDKDK 96 Query: 242 SIPLPETIVVLQK---------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 E L + + I + GHTD + N LS RA Sbjct: 97 FELKEEGKRYLNEFIPRYLSILMDPRFKKYISQIIVEGHTDDT---GDYMYNLELSQKRA 153 Query: 293 YSAYQVLMK---SGVSED------RISKISGFAHHRLKIASDP-MNSANRRIDILVEDRQ 342 + + +++ G+ +G ++ +L I + +RR++ ++ Sbjct: 154 FEVVRYILQSNIKGIDSKTKADLMSYITANGRSYSQLIIENGKVNRQKSRRVEFKFRLKE 213 >gi|149371838|ref|ZP_01891157.1| outer membrane protein, peptidoglycan-associated lipoprotein [unidentified eubacterium SCB49] gi|149354978|gb|EDM43539.1| outer membrane protein, peptidoglycan-associated lipoprotein [unidentified eubacterium SCB49] Length = 647 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 13/119 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 N FD + + LQK+ + + I +R HTD+ N N LS Sbjct: 533 DLNMIYFDLDKDFIRADAQIELQKVIKYMKKYPNLKIDVRSHTDSR---NSHAYNEDLSS 589 Query: 290 DRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDILVED 340 R + ++ G+S R+ G+ +L S+ ++ NRR + ++ + Sbjct: 590 RRNKNTIAYIVNHGGISAARL-TGRGYGETQLTNHCSDGVQCSEALHQLNRRSEFIIVE 647 >gi|146282539|ref|YP_001172692.1| OmpA family protein [Pseudomonas stutzeri A1501] gi|145570744|gb|ABP79850.1| OmpA family protein [Pseudomonas stutzeri A1501] Length = 457 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 11/107 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F++ S+ + L+++ E L + T+ ++ G DA+ A LS RA Sbjct: 356 FEEGSAQLDNKAQRDLERVVEYLRDNGKLTDSAALVGFGDATGDPARAAL---LSKLRAM 412 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 + + L K GV + +I+G ++D NRR+++ V Sbjct: 413 TVRRELNKRGVF---LKEINGMGSELPVASNDAGSGRVKNRRVEVWV 456 >gi|157736660|ref|YP_001489343.1| flagellar motor protein MotB [Arcobacter butzleri RM4018] gi|157698514|gb|ABV66674.1| flagellar motor component MotB [Arcobacter butzleri RM4018] Length = 251 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 22/202 (10%), Positives = 63/202 (31%), Gaps = 1/202 (0%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K W + YADF+++L+A F+ ++ + + + + +KA+++ F + Sbjct: 3 KKKCKCECPAGEKWAVPYADFLSLLLALFIALYALASINVEKQKALKEEFMKIYNFA-AS 61 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 E+ ++ + + + N+ + L S Sbjct: 62 DTIKEQEETEKSMTTDPTNEPDEGRKPVVQPLTKQNELENKNAKGGNLLELSDGTFMSVP 121 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + S + L + I+ + + + K R +D Sbjct: 122 AHLIFESGKAELSGADSADFLKKLAQLISAMPSDTEINVKGYAEDSEVNKSRYKDALDLS 181 Query: 200 SSTLSGLVADNIVKGVLFETTR 221 ++ + ++ + + + Sbjct: 182 TARANNVIRELLKYNIPSNRLY 203 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 57/154 (37%), Gaps = 19/154 (12%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--------------SII 229 A K ++ K +++ + + V T + + + + Sbjct: 59 AASDTIKEQEETEKSMTTDPTNEPDEGRKPVVQPLTKQNELENKNAKGGNLLELSDGTFM 118 Query: 230 DQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVISIR--GHT-DASPFRNIARDNW 285 +F+ + ++ L+K+ ++++ I G+ D+ ++ +D Sbjct: 119 SVPAHLIFESGKAELSGADSADFLKKLAQLISAMPSDTEINVKGYAEDSEVNKSRYKDAL 178 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 LS RA + + L+K + +R+ SG+ ++ Sbjct: 179 DLSTARANNVIRELLKYNIPSNRLYS-SGYGSNK 211 >gi|41059077|gb|AAR98873.1| outer membrane protein [Helicobacter pylori] Length = 179 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 6/101 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD L +I + + + + G+TD + N L + R S Sbjct: 78 FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 134 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 L+ GV +D I IS F + K NRR+D Sbjct: 135 NALVIKGVEKDMIKTIS-FGETKPKCTQKTRECYRENRRVD 174 >gi|153832073|ref|ZP_01984740.1| OmpA family protein [Vibrio harveyi HY01] gi|148871688|gb|EDL70529.1| OmpA family protein [Vibrio harveyi HY01] Length = 1563 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 53/162 (32%), Gaps = 22/162 (13%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245 K+ L+ + + L + + + + D + + F ++ Sbjct: 579 KESLKSGELLLKQIIDKLGDNVTFTDSIPNDVAEDSAMFVKDHKGAGLRLVFPFDNNQVQ 638 Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + L + + L+ V+ I GH + N LS RA + V Sbjct: 639 APHLSYLAAVDKELSKIPNAVVEIEGHACQ---NGDSEYNQNLSQQRAQHVAEFFSS--V 693 Query: 305 SEDRISKISGFAHHRLK--IASDP---MNSA---NRRIDILV 338 S+ R F R + ++ N+ NRR+++ + Sbjct: 694 SDIRF-----FGERRPIVEVPNNEIKRENAQLNINRRVEVRI 730 >gi|229520255|ref|ZP_04409681.1| chemotaxis protein MotB-related protein [Vibrio cholerae TM 11079-80] gi|167832518|gb|ACA01828.1| hypothetical protein VPI2_0011c [Vibrio cholerae] gi|229342621|gb|EEO07613.1| chemotaxis protein MotB-related protein [Vibrio cholerae TM 11079-80] Length = 244 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 27/191 (14%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+++ + L+ + + + + + V+ E +I I + T Sbjct: 44 ELTQKTNDVEAGIEELKQAELARKNIIYDVRDELAKRNVIVEIADNDTVIRIPESTLT-- 101 Query: 237 FDKSSSIPLPETIV-----------VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 F S + + + + I I GHTD+ + NW Sbjct: 102 FASGKSSIPNDATIQQAVKDIGVVLHSAIQKKDRFQYLDTIFIEGHTDSDSIHYRGKGNW 161 Query: 286 RLSLDRAYSAYQVLM-------KSGVSED----RISKISGFAHHRLKI---ASDPMNSAN 331 LS DRA S + V K G E+ ++ +SG+A R ++ S N Sbjct: 162 GLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYAATRRANLHESNQQEKSQN 221 Query: 332 RRIDILVEDRQ 342 RRIDI ++ Sbjct: 222 RRIDIRFTVKK 232 >gi|126735562|ref|ZP_01751307.1| Outer membrane protein, OmpA/MotB family [Roseobacter sp. CCS2] gi|126714749|gb|EBA11615.1| Outer membrane protein, OmpA/MotB family [Roseobacter sp. CCS2] Length = 599 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 77/238 (32%), Gaps = 13/238 (5%) Query: 106 ITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEK 165 + + ++ S + + + + + D + Sbjct: 360 LRQPGSQVQTESFDDGSTRVIVTRQDGTQIKTIRGSDGRVLQRTRIFADGSEYVLFDDTQ 419 Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGI 224 + + LP + ++++ + + L + +T + + + + + Sbjct: 420 RADPIDMTQLPQVEEDRVQPQTSQGDVDSLRLALMATQNAAIDRTFSLRQIRQVREVRAL 479 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-----HSTEVISIRGHTDASPFRN 279 I + +T F +S+ P L + ++ +V I GHTDA Sbjct: 480 APEI--ELDTITFATASAAIQPSQAEELTNLAVAISNIIEDDPRQVFLIEGHTDAV---G 534 Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 A N LS RA + + + + + + G+ LK+++ ANRR I Sbjct: 535 DASYNLALSDRRAETVALAMTEYFDIPPENLIT-QGYGESALKVSTPGPERANRRASI 591 >gi|329943865|ref|ZP_08292136.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328531571|gb|EGF58407.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 183 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 14/119 (11%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNW 285 ++ FD S+ VL +I +++ GHTD+ N Sbjct: 67 TVASLSGDVTFDVDSATLTDRAKQVLDEIVTRWNGKPPATVTVVGHTDSV---ADDAYNQ 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--------SDPMNSANRRIDI 336 LS RA + L V+ + SG + ++ +ANR +D+ Sbjct: 124 TLSERRAKAVADYLTSK-VASLNVQS-SGKGESEPVASETNEDGSVNEAGKAANRHVDV 180 >gi|327480795|gb|AEA84105.1| OmpA family protein [Pseudomonas stutzeri DSM 4166] Length = 457 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 11/107 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F++ S+ + L+++ E L + T+ ++ G DA+ A LS RA Sbjct: 356 FEEGSAQLDNKAQRDLERVVEYLRDNGKLTDSAALVGFGDATGDPARAAL---LSKLRAM 412 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 + + L K GV + +I+G ++D NRR+++ V Sbjct: 413 TVRRELNKRGVF---LKEINGMGSELPVASNDAGSGRVKNRRVEVWV 456 >gi|307637795|gb|ADN80245.1| peptidoglycan associated lipoprotein precursor [Helicobacter pylori 908] gi|325996393|gb|ADZ51798.1| peptidoglycan associated lipoprotein precursor [Helicobacter pylori 2018] gi|325997981|gb|ADZ50189.1| putative peptidoglycan associated lipoprotein [Helicobacter pylori 2017] Length = 152 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 40 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 96 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K NRR+D+ + Sbjct: 97 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCVQKTRECYRENRRVDVKL 150 >gi|29349260|ref|NP_812763.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron VPI-5482] gi|253570394|ref|ZP_04847803.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6] gi|298384800|ref|ZP_06994359.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14] gi|29341168|gb|AAO78957.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron VPI-5482] gi|251840775|gb|EES68857.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6] gi|298261944|gb|EFI04809.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14] Length = 394 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 4/134 (2%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 ++ ++ + ++ + + + E ++ T F S Sbjct: 244 ELELRQMRDQMNAMAAANMQLQQQLANAQQPVVEEAEEVVVTDANIAPRTVFFKIGSDKL 303 Query: 245 LPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302 P+ + L + + + I G+ D+ N +LSL+RA + +L+K Sbjct: 304 SPQEEMNLSYLASKMKEFPNMTYTINGYADS--ATGTPSINQKLSLERAQAVKDLLVKKY 361 Query: 303 GVSEDRISKISGFA 316 G+S DR+S +G Sbjct: 362 GISADRLSVAAGGG 375 >gi|291570403|dbj|BAI92675.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 204 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 7/118 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + ++ ++ + + I + N F+ S+ P+ + ++ KI E L Sbjct: 61 AQIIPAAFENIPGIKSVFSTLKIDPVRIENRIYFNSGSAQLNPQDLQIITKIQEFLDRYP 120 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + I GHTD R A N +L+L+RA + L K G+ R+ + + + Sbjct: 121 QLSLRIIGHTD---LRGNAARNQQLALNRAIAVRDALTKQGIDPKRLEVV---GNSQP 172 >gi|315635826|ref|ZP_07891088.1| flagellar motor protein MotB [Arcobacter butzleri JV22] gi|315479805|gb|EFU70476.1| flagellar motor protein MotB [Arcobacter butzleri JV22] Length = 252 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 22/202 (10%), Positives = 63/202 (31%), Gaps = 1/202 (0%) Query: 20 KVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTA 79 K W + YADF+++L+A F+ ++ + + + + +KA+++ F + Sbjct: 3 KKKCKCECPAGEKWAVPYADFLSLLLALFIALYALASINVEKQKALKEEFMKIYNFA-AS 61 Query: 80 SKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQ 139 E+ ++ + + + N+ + L S Sbjct: 62 DTIKEQEETEKSMTTDPTNEPDEGRKPVVQPLTKQNELENKNAKGGNLLELSDGTFMSVP 121 Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + S + L + I+ + + + K R +D Sbjct: 122 AHLIFESGKAELSGADSADFLKKLAQLISAMPSDTEINVKGYAEDSEVNKSRYKDALDLS 181 Query: 200 SSTLSGLVADNIVKGVLFETTR 221 ++ + ++ + + + Sbjct: 182 TARANNVIRELLKYNIPSNRLY 203 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 57/154 (37%), Gaps = 19/154 (12%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI--------------SII 229 A K ++ K +++ + + V T + + + + Sbjct: 59 AASDTIKEQEETEKSMTTDPTNEPDEGRKPVVQPLTKQNELENKNAKGGNLLELSDGTFM 118 Query: 230 DQRNTPMFDKSSSIPL-PETIVVLQKIGEVLAHSTEVISIR--GHT-DASPFRNIARDNW 285 +F+ + ++ L+K+ ++++ I G+ D+ ++ +D Sbjct: 119 SVPAHLIFESGKAELSGADSADFLKKLAQLISAMPSDTEINVKGYAEDSEVNKSRYKDAL 178 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 LS RA + + L+K + +R+ SG+ ++ Sbjct: 179 DLSTARANNVIRELLKYNIPSNRLYS-SGYGSNK 211 >gi|261251271|ref|ZP_05943845.1| hypothetical protein VIA_001290 [Vibrio orientalis CIP 102891] gi|260938144|gb|EEX94132.1| hypothetical protein VIA_001290 [Vibrio orientalis CIP 102891] Length = 188 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETI 249 ++ ++ + + G + + D+ + + P Sbjct: 41 TQVSGHLTQREAKSENTLLNSGRDVVHSEAADDVCFYDKETQSLVLNYGIDIYKLSPNHK 100 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 VL++ L ++T I I GH D+ N LS RA + L +RI Sbjct: 101 QVLEQYLG-LVNNTAKIYIEGHADSL---GGEGYNKALSARRAKQVAKYLKSDLKQGNRI 156 Query: 310 SKISGFAHHRLK--IASDPMNSANRRIDILVED 340 + + + + + NRR+ I ++ Sbjct: 157 VEHA-YGESSPICNLEQNSATGCNRRVVITIKS 188 >gi|269963847|ref|ZP_06178160.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269831420|gb|EEZ85566.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 1563 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 53/162 (32%), Gaps = 22/162 (13%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245 K+ L+ + + L + + + + D + + F ++ Sbjct: 579 KESLKSGELLLKQIIDKLGDNVTFTDSIPNDVAEDSAMFVKDHKGAGLRLVFPFDNNQVQ 638 Query: 246 PETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + L + + L+ V+ I GH + N LS RA + V Sbjct: 639 APHLSYLAAVDKELSKIPNAVVEIEGHACQ---NGDSEYNQNLSQQRAQHVAEFFSS--V 693 Query: 305 SEDRISKISGFAHHRLK--IASDP---MNSA---NRRIDILV 338 S+ R F R + ++ N+ NRR+++ + Sbjct: 694 SDIRF-----FGERRPIVEVPNNEIKRENAQLNINRRVEVRI 730 >gi|154173716|ref|YP_001407729.1| flagellar motor protein MotB [Campylobacter curvus 525.92] gi|112803650|gb|EAU00994.1| flagellar motor protein [Campylobacter curvus 525.92] Length = 242 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 77/221 (34%), Gaps = 5/221 (2%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + + KA++ F Sbjct: 3 KKCKKQECPAG-EKWAVPYADFLSLLLALFIALYAISAANTEKVKALKTEF--IKIFDYP 59 Query: 79 ASKGIFDEQNPPERSSQNKIDLSID-EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 ASK + + + S K D E + + + + K + E I Sbjct: 60 ASKTTDNIVSQGNKESNAKNDAKSQLEQLKATNAEQEQTIKELKAMLDQSEEQISLDMPD 119 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + + D + + + + + K + + + ++ + A Sbjct: 120 GVTFKAGETQVTDQNSIEFIKTTAKIANKLPKNISVEIRGYTGGSTSGLESFELGYKRAM 179 Query: 198 KISSTLSGLVADNIV-KGVLFETTRTGILISIIDQRNTPMF 237 ++ L+ D + V + +S D +F Sbjct: 180 NVAQILADDGLDTSRMRIVSYGNEPAPKSVSGSDSNRVQIF 220 Score = 44.6 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 16/182 (8%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + +K + + +KE K +L+ L + +K + ++ Sbjct: 57 DYPASKTTDNIVSQGNKESNAKNDAKSQLEQLKAT------NAEQEQTIKELKAMLDQSE 110 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNI 280 IS+ D + F + + + K +A+ IRG+T S Sbjct: 111 EQISL-DMPDGVTFKAGETQVTDQNSIEFIKTTAKIANKLPKNISVEIRGYTGGSTSGLE 169 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + L RA + Q+L G+ R+ +I + + S + +N R+ I + Sbjct: 170 SF---ELGYKRAMNVAQILADDGLDTSRM-RIVSYG-NEPAPKSVSGSDSN-RVQIFFKV 223 Query: 341 RQ 342 + Sbjct: 224 DK 225 >gi|42521052|ref|NP_966967.1| peptidoglycan-associated lipoprotein, putative [Wolbachia endosymbiont of Drosophila melanogaster] gi|99034094|ref|ZP_01314208.1| hypothetical protein Wendoof_01001001 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|42410793|gb|AAS14901.1| peptidoglycan-associated lipoprotein, putative [Wolbachia endosymbiont of Drosophila melanogaster] Length = 159 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 17/124 (13%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 ++ I D+R F S + L + EVL + + +++ GHTD Sbjct: 35 VVKQIGDKR--VFFGYDESSIAEVSADALLDVMEVLQDNPDAKVTLTGHTDNR---GSHE 89 Query: 283 DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLK--IASDP-------MNSANR 332 N L RA +A + ++ + E+RI S + D ++ NR Sbjct: 90 YNLALGARRADAAKKFMVSCTPYIENRIKTAS-KGETEPLVNVKDDSRNSKYEKEHAKNR 148 Query: 333 RIDI 336 R++ Sbjct: 149 RVEF 152 >gi|254454899|ref|ZP_05068336.1| outer membrane protein, OmpA/MotB family [Octadecabacter antarcticus 238] gi|198269305|gb|EDY93575.1| outer membrane protein, OmpA/MotB family [Octadecabacter antarcticus 238] Length = 147 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 10/103 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNWRLSLDR 291 F S+ P+ L +G + EV I G+TDA N LS R Sbjct: 38 FPSGSAAIQPDQSRELAILGTAIKDLIVERPGEVFLIEGYTDAVGAAG---YNLALSDRR 94 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333 A + L + V + G+ LK+ + ANRR Sbjct: 95 AETVALALTQYFDVPPANLVT-QGYGESLLKVQTLEAEQANRR 136 >gi|315127493|ref|YP_004069496.1| hypothetical protein PSM_A2431 [Pseudoalteromonas sp. SM9913] gi|315016007|gb|ADT69345.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913] Length = 241 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 52/171 (30%), Gaps = 16/171 (9%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 E ++A K L + + + + +++ Sbjct: 69 EQTIAEQQQALTVMAEKTNDYQHVLNHNSHLEAQLELLAQQNEQLTQSQLNNLLAMTVQ- 127 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 F SS P L ++ +L + + + G D + N LS Sbjct: 128 ------FKTGSSDIAPHFAKQLDQLVALLKSQPQLALDLSGFADQR---GEEQANLLLSK 178 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDIL 337 R + L+K GVS R+S F + S+ + N RR+ + Sbjct: 179 ARVNAVQSYLIKQGVSHTRLSA-QAFGEQQSIANSNTLED-NFFDRRVTLT 227 >gi|256421223|ref|YP_003121876.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] gi|256036131|gb|ACU59675.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] Length = 778 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 27/237 (11%), Positives = 62/237 (26%), Gaps = 15/237 (6%) Query: 74 KNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFY 133 + + NP + S + + Sbjct: 519 VQTSSKTTEEPVVTNPRQAVSAPIDIPGAAPTSHPAEPVVAKNDPVAAPVKEEPAKEPKS 578 Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 + ++ K K + + + EK K ++ Sbjct: 579 AAPVRRGPGSKTPAPVKKPGVKTPAVAVAAPVVTAPVTEEPVVEKTPEKAPEKTPAKPVE 638 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 +A D + + + +D +S++ ++ +L Sbjct: 639 TVAVAQPEARQEKEMDEMDAAIQHKMEGM-----------EFYYDYNSAVLTTKSRNLLD 687 Query: 254 KIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 ++ VL + +R +TD+ N LS R Y+ + L++ GV R+ Sbjct: 688 RVAVVLNQYPDWKLLVRSYTDSR---GSDAYNKDLSALRCYAVIEYLVRKGVPSTRL 741 >gi|153875209|ref|ZP_02003108.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152068328|gb|EDN66893.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 295 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 71/221 (32%), Gaps = 9/221 (4%) Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 + + + + + + DS L + + +K Sbjct: 76 DKRIDRLKIIIEESSIGDEADEVYYDSLDIHALVIEAETFYEQKDYQKALTLFQKAQKRP 135 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET--TRTGILISIIDQRNTPMFDKSSS 242 + + L + A +L + + I + N+P F + Sbjct: 136 DGQLMRTYAGLYETYVKLGQKDKATKAFGQLLILSLKENNKLNIKFLFDVNSPEFIDDAG 195 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + E + LQ I + + + I GH + A N +LSL RA + +++ Sbjct: 196 LIK-EYMAWLQMIAQYFQENNQCFQIAGHCSRT---GTATYNDKLSLSRALTVQKLMQAY 251 Query: 303 GVSEDRISKISGFAHHRLKI---ASDPMNSANRRIDILVED 340 + + + G + D ++ +RR++ILV + Sbjct: 252 LPDIMQRTTVVGKGFRENLVGIGTDDARDAIDRRVEILVMN 292 >gi|289678321|ref|ZP_06499211.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5] Length = 62 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 3/60 (5%) Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQG 343 LS RA S L GV + + + G + ++ + NRR+++ ++ G Sbjct: 1 DLSQQRAQSVATYLTSQGVDQAHL-SVRGAGPDQPIASNADVNGRAQNRRVEVNLKPIPG 59 >gi|163801699|ref|ZP_02195597.1| chemotaxis protein MotB-related protein [Vibrio sp. AND4] gi|159174616|gb|EDP59418.1| chemotaxis protein MotB-related protein [Vibrio sp. AND4] Length = 244 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 27/191 (14%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+++ + L+ + + + + + V+ E +I I + T Sbjct: 44 ELTQKTNDVEAGIEELKQAELARKNIIYDVRDELAKRNVIVEIADNDTVIRIPESTLT-- 101 Query: 237 FDKSSSIPLPETIV-----------VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 F S + + + + + I GHTD+ + NW Sbjct: 102 FASGKSSIPNDATIQQALKDIGVVLHSAIQKKDRFQYLDTVFIEGHTDSDGIHYRGKGNW 161 Query: 286 RLSLDRAYSAYQVLM-------KSGVSED----RISKISGFAHHRLKI---ASDPMNSAN 331 LS DRA S + V K G E+ ++ +SG+A R ++ S N Sbjct: 162 GLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYAATRRANLQESNQQEKSQN 221 Query: 332 RRIDILVEDRQ 342 RRIDI ++ Sbjct: 222 RRIDIRFTVKK 232 >gi|126725476|ref|ZP_01741318.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2150] gi|126704680|gb|EBA03771.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2150] Length = 216 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 6/129 (4%) Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVIS 267 + ++ + D F + S I + E L + +L +S + Sbjct: 85 LAVSLVNPLMPANTISRPADYDYRIHFPQGSDIIVEEFGQHLDMLAGILQYSSLSQTCLK 144 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + GH+D A+ N+ + + RA + L +++ Sbjct: 145 LVGHSDT---SGSAKANFNMGMLRAKAVKGYLTNRTAFASTRIEVTSEGEDAPLQGISTT 201 Query: 328 NSANRRIDI 336 + NRR++I Sbjct: 202 DPKNRRVEI 210 >gi|138894940|ref|YP_001125393.1| putative periplasmic protein [Geobacillus thermodenitrificans NG80-2] gi|196248493|ref|ZP_03147194.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16] gi|134266453|gb|ABO66648.1| Putative periplasmic protein [Geobacillus thermodenitrificans NG80-2] gi|196212218|gb|EDY06976.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16] Length = 223 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 55/174 (31%), Gaps = 28/174 (16%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 +++K+++ + S + L + E + I + +F+ S+ Sbjct: 42 EEKEKKIEQVVSVKSEIIRALTEAFKQSNMTIEIDQQTGAIRF---PGSILFESDSAEIS 98 Query: 246 PETIVVLQKI---------GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 PE LQ+ + + I I GHTD N LS RAY+ Sbjct: 99 PEGKKFLQQFIPKYMGILLQDRFQNEISSIIIEGHTDR---NGTYMYNMSLSQRRAYAVL 155 Query: 297 QVLMKSGVS-------EDRISKISGFAHHRLKIAS----DPMNSANRRIDILVE 339 + + + +G + DP S RR++ L Sbjct: 156 EYIYSKEFPNFKERELSKKYITANGRSFSSPLTDENGKYDPDRS--RRVEFLFR 207 >gi|167950653|ref|ZP_02537727.1| OmpA domain protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 62 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 N LS RA + L +GV+ +R+S GF + ++ + NRR +++ Sbjct: 2 REYNKDLSHRRAITVMHYLSDNGVAAERLSA-EGFGEEQPISDNESLEGQTMNRRAELI 59 >gi|332669857|ref|YP_004452865.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484] gi|332338895|gb|AEE45478.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484] Length = 183 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 13/111 (11%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + +F +S P L + E + +++ GHTD+ N LS RA Sbjct: 75 SDVLFAYASHDLDPAAAAALAALVEQVPA-GAQVAVVGHTDSR---GGDAVNLPLSSARA 130 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLK-------IASDPMNSANRRIDI 336 + VL + D + + G + NRR+++ Sbjct: 131 EAVAAVLRST--RPDLVLAVGGAGSTEPVADEYVAGAPDLAAMARNRRVEL 179 >gi|118474845|ref|YP_891435.1| flagellar motor protein MotB [Campylobacter fetus subsp. fetus 82-40] gi|118414071|gb|ABK82491.1| flagellar motor protein [Campylobacter fetus subsp. fetus 82-40] Length = 238 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 1/90 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ ++ I+A + +A++ + Sbjct: 3 KKKKQQECPAG-EKWAVPYADFLSLLLALFIALYAISAVNTAKVEALKTEIIKIFDFPDS 61 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITK 108 + E+ + T Sbjct: 62 KGVKQSSKNAKSEKQFDGPGIAMQNSDSTS 91 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 54/152 (35%), Gaps = 10/152 (6%) Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 + S + + K+ + ST +N V + + I Sbjct: 58 FPDSKGVKQSSKNAKSEKQFDGPGIAMQNSDSTSVKQNTNNERYRVALDQAENQVAI--- 114 Query: 230 DQRNTPMFDKSSSI-PLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWR 286 D FD S+ P+ I ++ I ++ E +S+ G+ D + Sbjct: 115 DLPAGIKFDPMSAEIYNPDMINFVKIISMIINKVPESVSVEIRGYADDYNEYAKDY---K 171 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 L+ DRAY+ +L+ +G+ R+ + + F Sbjct: 172 LAADRAYNVLTMLIGNGIDPKRL-RFTSFGDS 202 >gi|332663336|ref|YP_004446124.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332332150|gb|AEE49251.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 665 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 35/105 (33%), Gaps = 9/105 (8%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F S L +A + I I G+ D N LS RA Sbjct: 565 FLFKFDSDEMEFNEQDKLDAFVATIAGKDIQRIEIDGYADDIGDNG---YNLELSEKRAK 621 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 L+ G RI + G+ I + + NR++++ + Sbjct: 622 KIALYLVDKGYPVTRI-ALKGYGE----ITDESLKKLNRKVELKI 661 >gi|330447006|ref|ZP_08310656.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491197|dbj|GAA05153.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 263 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 67/208 (32%), Gaps = 7/208 (3%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + +Q EH L + +G C N LS A Sbjct: 33 PPPQQAQLRQLEHHSFELQLLAVRGAKHCLPGQYITLENLYRKAREEALSGFVKDAEITL 92 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + Q I + L + + + + F + + LP+ Sbjct: 93 LKYQTQNAVIQEQMDWLEYHTLCLDPHYSEVELKERFLLYMAVDNQ-FALNKTELLPQYK 151 Query: 250 VVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L E++ + + G+TD+ + N+ L L RA + + L++ GV+ ++ Sbjct: 152 ESLIYASEIIKRQEHWHLQLIGYTDSQ---GSTQSNYHLGLARANTVKEFLVEKGVNTNQ 208 Query: 309 ISKISGFAHHRLKIA-SDPMNSANRRID 335 I + + + +NR+++ Sbjct: 209 I-SVVSVGESQAIGDYTLTKQLSNRKVE 235 >gi|149923536|ref|ZP_01911937.1| OmpA family protein [Plesiocystis pacifica SIR-1] gi|149815605|gb|EDM75136.1| OmpA family protein [Plesiocystis pacifica SIR-1] Length = 286 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 4/103 (3%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S P+T LQ + +A ++ + H D N L+ R Sbjct: 186 VFFGFDSPKLSPDTQQQLQAAAQCIADQGRLVYLESHADPR---GTEEYNILLTDKRGQG 242 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + L+ GV + + ++ + D + +RR++ + Sbjct: 243 VKKFLVDLGVPPENM-QVISKGSLEARGTDDSTYADDRRVEFV 284 >gi|315126010|ref|YP_004068013.1| sodium-type flagellar protein MotY precursor [Pseudoalteromonas sp. SM9913] gi|315014524|gb|ADT67862.1| putative sodium-type flagellar protein MotY precursor [Pseudoalteromonas sp. SM9913] Length = 290 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 8/108 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQK---IGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 + + F E + K L + + + GHTD + N L Sbjct: 178 RDHQLQFASGQRTVTAEKDLKFLKDLVHYISLDNRVSKVLVDGHTDNT---GSPLSNRLL 234 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSANRRI 334 S +RA L++ G+ +D + ++ I + S+NRR+ Sbjct: 235 SKERADDVAARLIEFGLPKD-MLEVRAHGQRYPIIKNSKQGASSNRRV 281 >gi|171315861|ref|ZP_02905091.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] gi|171098957|gb|EDT43745.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5] Length = 264 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 39/124 (31%), Gaps = 17/124 (13%) Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNIARDNWR 286 ++ +F S P L E + E+ + GHTD + N Sbjct: 145 QSDALFAFGKSSLDSMLPAGKAQLDDAIERIKRHKEITRIVVVGHTDRI---GPSTVNEP 201 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILV 338 LS RA + L+ G++ I G + S +RR+ I V Sbjct: 202 LSRARAQTVRGYLISHGLNGS-IIDAEGVGSSQPVTHCPAGQSRAVIACLQPDRRVSISV 260 Query: 339 EDRQ 342 R Sbjct: 261 SGRN 264 >gi|288956961|ref|YP_003447302.1| hypothetical protein AZL_001200 [Azospirillum sp. B510] gi|288909269|dbj|BAI70758.1| hypothetical protein AZL_001200 [Azospirillum sp. B510] Length = 73 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 8/78 (10%) Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 + + G TDA N LS RA L + GV ++ + G ++D Sbjct: 1 MVLIGFTDAQ---GARAANVTLSQQRAQIIADELRRRGV---QVQSVMGLGPDLPVTSND 54 Query: 326 PMNSA--NRRIDILVEDR 341 NRR+++ + R Sbjct: 55 TEEGRDKNRRVEVWLRQR 72 >gi|269123022|ref|YP_003305599.1| OmpA/MotB domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268314348|gb|ACZ00722.1| OmpA/MotB domain protein [Streptobacillus moniliformis DSM 12112] Length = 491 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 79/284 (27%), Gaps = 23/284 (8%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 K +TA + P + I+ + + I +K +E + Sbjct: 206 INKVGITAGLRLGQLSKPVVEEPKLPIEPEVKPEVKPEPKPEVIEKIVEKIVEVPVEKIV 265 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 + + + + EK + +EK + K + + ++ + K Sbjct: 266 EKIVEVPVEKIVEKIVEVPVEKVVEKIVEVPVEKMVEKIVEVPVEKMVEKIVEVPVEKVV 325 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + + + + V I + +F Sbjct: 326 EKMVEVPVEKIVEKEKEVVKEVEVPVHIKPQIKKIELSAD---ALFKFDKYKLEDMLEKG 382 Query: 252 LQKIGEVLAH------STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 +I E++ + I I GHTD N L L RA + L + GV+ Sbjct: 383 KMEIQELVKKLSTDYVRLDRIDIIGHTDRL---GSDSYNLALGLRRAQTVRSYLQELGVT 439 Query: 306 EDRISKISGFAHHRLKI--ASDPMNSA-------NRRIDILVED 340 ++ K+ + NRR++I + Sbjct: 440 TP--ITVASKGKRDPKVKCPGTKATAKLKQCLLPNRRVEINLTG 481 >gi|187931912|ref|YP_001891897.1| outer membrane protein FopA [Francisella tularensis subsp. mediasiatica FSC147] gi|187712821|gb|ACD31118.1| outer membrane protein FopA [Francisella tularensis subsp. mediasiatica FSC147] Length = 392 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 18/199 (9%), Positives = 55/199 (27%), Gaps = 11/199 (5%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + D + + + + + L I Sbjct: 191 GANGRAGTNMIGAGLTWFFGGKDTTNNDTGNIQDNGATTAAQTVAMPTIDESKYVLPAGI 250 Query: 200 SS-TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + ++ V + + I F + + + Sbjct: 251 KQCEGNFNLTEDGVACYTVNGDDVTVYLDIK-------FAYDKATLNAKGKKAIASFVNF 303 Query: 259 LAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + + ++++G+ + N +LS RA + + + G+ ++I GF Sbjct: 304 IKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQAVADYMKQLGLDSEKIIT-KGFG 362 Query: 317 HHRLKIASDPMNSANRRID 335 ++ + N+R++ Sbjct: 363 YNDTLSGIHKSDPRNQRVE 381 >gi|258648579|ref|ZP_05736048.1| OmpA family protein [Prevotella tannerae ATCC 51259] gi|260851358|gb|EEX71227.1| OmpA family protein [Prevotella tannerae ATCC 51259] Length = 691 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 45/144 (31%), Gaps = 34/144 (23%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNW 285 +I + + + V L ++ +L + + + + D +R N Sbjct: 514 NIPVLVRNVFYQFDKAAITDSSKVALDRLAALLKDNPHITIELSSNCD---YRGTDAYND 570 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-------------ASDPM----- 327 RLS RA + L+ G+ R++ G+ KI D + Sbjct: 571 RLSQQRAENVVHYLISQGIPAARLTP-KGYGKKNPKIVSKKLAETYTFLKEGDTLTTAYI 629 Query: 328 -----------NSANRRIDILVED 340 N+ NRR + V Sbjct: 630 MKLPPKEQEICNALNRRTEFRVLR 653 >gi|209364239|ref|YP_001425325.2| peptidoglycan-associated lipoprotein [Coxiella burnetii Dugway 5J108-111] gi|207082172|gb|ABS76935.2| peptidoglycan-associated lipoprotein [Coxiella burnetii Dugway 5J108-111] Length = 195 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 7/141 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + + ++ I + T FD S+ + ++ L Sbjct: 55 AQAYALAEGKGYQGQLKKDSEGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYL 114 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 A + + + G+TD N L R + ++L + GV+ +I +S + Sbjct: 115 ATHSTAKVRLEGNTDNR---GSREYNIGLGWRRDQAVARILEQEGVAPKQIDMVS-YGKE 170 Query: 319 RLKI--ASDPMNSANRRIDIL 337 R + ++ NRR++++ Sbjct: 171 RPAVMGNNENAWRLNRRVNLI 191 >gi|320158393|ref|YP_004190771.1| membrane protein [Vibrio vulnificus MO6-24/O] gi|319933705|gb|ADV88568.1| membrane protein [Vibrio vulnificus MO6-24/O] Length = 188 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + IS+ GH D++ N +LS RA + + L K +RI + F Sbjct: 110 IVDPNRKISVEGHADST---GSDTYNKQLSARRANTVARFLKKDLGLGNRIVE-KAFGET 165 Query: 319 RLK--IASDPMNSANRRIDILVE 339 + N NRR+ + +E Sbjct: 166 TPICAAEENQQNGCNRRVVLTLE 188 >gi|296269185|ref|YP_003651817.1| OmpA/MotB domain-containing protein [Thermobispora bispora DSM 43833] gi|296091972|gb|ADG87924.1| OmpA/MotB domain protein [Thermobispora bispora DSM 43833] Length = 193 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 66/186 (35%), Gaps = 17/186 (9%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 ++ + + ++DL + ++ + + + + + + + Sbjct: 16 AVMAAPASAWADRAAPTPVPEDAVMPVEDLITPVEDVIAEVESLDGTESEEKQGEQITLA 75 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARD 283 ++ +F + + L++I E + +I + GHTD Sbjct: 76 LT-----ADVLFPLDKATLTAKARQRLREIAEKIKSDGAGGLIRVEGHTDDQ---GSDAY 127 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRRIDI 336 N LS RA + +VL + + + G+ R K+ + + + NRR++I Sbjct: 128 NLALSRRRAEAVRRVLERELAGMNVTLQAKGYGESRPKVPNFIKGRPVEKNRAKNRRVEI 187 Query: 337 LVEDRQ 342 + R+ Sbjct: 188 IFTARR 193 >gi|27366554|ref|NP_762081.1| outer membrane protein [Vibrio vulnificus CMCP6] gi|27358120|gb|AAO07071.1|AE016808_91 Outer membrane protein [Vibrio vulnificus CMCP6] Length = 188 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + IS+ GH D++ N +LS RA + + L K +RI + F Sbjct: 110 IVDPNRKISVEGHADST---GSDTYNKQLSARRANTVARFLKKDLGLGNRIVE-KAFGET 165 Query: 319 RLK--IASDPMNSANRRIDILVE 339 + N NRR+ + +E Sbjct: 166 TPICAAEENQQNGCNRRVVLTLE 188 >gi|241205007|ref|YP_002976103.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858897|gb|ACS56564.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 739 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285 +T F S+ L+K+ + + +E I GHTDA + N Sbjct: 618 DLDTITFATGSADIPMTQARTLRKVADAISQVLEKDPSETFLIEGHTDAV---GSDQSNL 674 Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA S VL G++ + + G+ LK+ + NRR+ I Sbjct: 675 ILSDQRAESVANVLSDVYGIAPENL-ATQGYGESYLKVNTSAPEQENRRVTI 725 >gi|318057618|ref|ZP_07976341.1| secreted protein [Streptomyces sp. SA3_actG] Length = 196 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 + +FDK P ++ IGE + G TD LS Sbjct: 87 QAEVLFDKDKFALDPSGRARIKAIGEEAKKQRARTVRVFGFTDNL---GSYAHGKTLSKR 143 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 RA + L + + + ++ G++ + NRR+++ Sbjct: 144 RADIVHDELAQY-LGPEVTFEVRGYSEDYPIADNTTEEGRRKNRRVEV 190 >gi|315023748|gb|EFT36751.1| Thrombospondin type 3 repeat:OmpA/MotB [Riemerella anatipestifer RA-YM] Length = 464 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 6/99 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDN 284 + F +S + P++ L ++ + G TD A N Sbjct: 355 EVNKNFEGIEFALNSDVIRPQSFGKLDNAANIIKGMNTSKQYLVIGATDTR---GSASYN 411 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 +LS RA + + L+ GVS + G LK Sbjct: 412 KKLSQRRADAVVKYLVNKGVSTS-MLVAEGRGQEDLKYP 449 >gi|118602526|ref|YP_903741.1| OmpA/MotB domain-containing protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567465|gb|ABL02270.1| OmpA/MotB domain protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 190 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 8/104 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + ++ + K + ++ E + + GHTD N L +RA S Sbjct: 90 FSYDDTEIDEDSTKQIVKHANFMRNNPELNLRLEGHTDER---GTREYNLALGENRALSV 146 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 ++L +S K+ F + + + + NRR++ + Sbjct: 147 KEILGLYDLSSR--VKVISFGEEKPILQRHDEDVWQKNRRVEFI 188 >gi|154244938|ref|YP_001415896.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus Py2] gi|154159023|gb|ABS66239.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2] Length = 296 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 72/218 (33%), Gaps = 16/218 (7%) Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + + + R + +S +++ L + ++ A Sbjct: 43 DFRSKTDVQEDAIEVAREVARKLDAMSGQVRSAIATVDASQQVRRQLLQDIESQLRAEGL 102 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 ++ + + T + + + I+ + R P + Sbjct: 103 NVQIDEQNGVLRLTEDAVRFEPSRSDLAGRARSNVDKIARVLDRVLPAYTACHVAEGAAG 162 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK------- 301 Q S E + I GHTD++ NW+LS +RA + Y+ ++ Sbjct: 163 GTACQPGAGP---SLETVFIEGHTDST---GEDGTNWQLSTERAVNTYRAIVAGAPRLRG 216 Query: 302 -SGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 + + I +SG+A R ++ + NRRID+ Sbjct: 217 LRNLRGEEILSVSGYASTRPIDPTESREAWARNRRIDL 254 >gi|330947103|gb|EGH47879.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B] Length = 156 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 6/79 (7%) Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + I GH D N ++S +RA S + SG+ +R+S+ G Sbjct: 21 DQKTAVLILGHADT---SGSTEANQKISQERAQSVAAIFRLSGLERNRLSQ-RGMGAVMP 76 Query: 321 KIASDP--MNSANRRIDIL 337 + A+D + NRR++IL Sbjct: 77 RAANDSLQGRALNRRVEIL 95 >gi|209809116|ref|YP_002264654.1| outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] gi|208010678|emb|CAQ81065.1| outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] Length = 275 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 11/188 (5%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + ++ E ++ A ++L ++ L + + Sbjct: 83 PATVHQAKQNEARIARELEGGLQLDAANDLIIQRNLLARLERQLDYVKRQETCQPPSDSN 142 Query: 220 TRT---GILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDA 274 + + I D N F +S+ P+ +V L + ++L + I GH DA Sbjct: 143 SGNSDIELAQKIYDLLNKDNQFAFNSAELNPKYVVNLSEASQLLKKHEDFKLLITGHADA 202 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 N L+++RA + L G++ +RI + + + NR Sbjct: 203 I---GEEDGNQELAIERAKQVKRYLSIFGLALNRIH-VDAVGSNDPYFEGTEPHVRLTNR 258 Query: 333 RIDILVED 340 R+ I + + Sbjct: 259 RVTIELLE 266 >gi|297202083|ref|ZP_06919480.1| type VI secretion system OmpA/MotB [Streptomyces sviceus ATCC 29083] gi|197714277|gb|EDY58311.1| type VI secretion system OmpA/MotB [Streptomyces sviceus ATCC 29083] Length = 210 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 56/193 (29%), Gaps = 18/193 (9%) Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 ++ G + E P K A + ++ D+ + + Sbjct: 26 TPAHADDGDPSYPPGTEPSATAPVEVDPNDPDLKLPEGATLAEPKVLDIKQVVEDQTGDE 85 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEV 265 ++ V F + +F K S+ + + I + + Sbjct: 86 RREDTNADVKFAL------------QAEVLFGKDSAKLNGDARARISAIAAEIKNQNATR 133 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 I + G TD LS RA + VL + ++ G++ ++ Sbjct: 134 IRVFGFTDNL---GSYAHGRTLSRQRANAVQDVLDQELKDSGITYEVRGYSEDFPIASNA 190 Query: 326 PMNSA--NRRIDI 336 NRR+++ Sbjct: 191 TEAGRKKNRRVEV 203 >gi|212219430|ref|YP_002306217.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuK_Q154] gi|215918885|ref|NP_819143.2| putative peptidoglycan-associated lipoprotein [Coxiella burnetii RSA 493] gi|206583770|gb|AAO89657.2| peptidoglycan-associated lipoprotein [Coxiella burnetii RSA 493] gi|212013692|gb|ACJ21072.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuK_Q154] Length = 195 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 7/141 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + + ++ I + T FD S+ + ++ L Sbjct: 55 AQAYALAEGKGYQGQLKKDSEGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYL 114 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 A + + + G+TD N L R + ++L + GV+ +I +S + Sbjct: 115 ATHSTAKVRLEGNTDNR---GSREYNIGLGWRRDQAVARILEQEGVAPKQIDMVS-YGKE 170 Query: 319 RLKI--ASDPMNSANRRIDIL 337 R + ++ NRR++++ Sbjct: 171 RPAVMGNNENAWRLNRRVNLI 191 >gi|188584474|ref|YP_001927919.1| OmpA/MotB domain protein [Methylobacterium populi BJ001] gi|179347972|gb|ACB83384.1| OmpA/MotB domain protein [Methylobacterium populi BJ001] Length = 718 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 11/172 (6%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID- 230 P + + + ++ + A + + + + + + + Sbjct: 531 ELPPPDIRIPRDRYVVDYEQADERAVYEALSAPPVQTLDRRYTLDQVRYSPQLRARMPSV 590 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285 NT FD S P+ L I E + + EV I G+TDA DN Sbjct: 591 DINTITFDTGSFTVTPDQAKRLSTIAEAINRTIKDNPQEVFLIEGYTDAV---GSDIDNL 647 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA S VL ++ V + ++ G+ LK+ + N NRR+ + Sbjct: 648 SLSDRRAQSVAAVLTQNFQVPPENLTT-QGYGEQYLKVNTQEANRENRRVTV 698 >gi|254228178|ref|ZP_04921607.1| Flagellar motor protein [Vibrio sp. Ex25] gi|262394011|ref|YP_003285865.1| chemotaxis protein MotB-like protein [Vibrio sp. Ex25] gi|151939251|gb|EDN58080.1| Flagellar motor protein [Vibrio sp. Ex25] gi|262337605|gb|ACY51400.1| chemotaxis protein MotB-related protein [Vibrio sp. Ex25] Length = 244 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 27/191 (14%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+++ + L+ + + + + + V+ E +I I + T Sbjct: 44 ELTQKTNDVEAGIEELKQAELARKNIIYDVRDELAKRNVIVEIADNDTVIRIPESTLT-- 101 Query: 237 FDKSSSIPLPETIV-----------VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 F S + + + + + I GHTD+ + NW Sbjct: 102 FASGKSSIPNDATIQQAVKDIGVVLHSAIQKKDRFQYLDTVFIEGHTDSDSIHYRGKGNW 161 Query: 286 RLSLDRAYSAYQVLM-------KSGVSED----RISKISGFAHHRLKI---ASDPMNSAN 331 LS DRA S + V K G E+ ++ +SG+A R ++ S N Sbjct: 162 GLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYAATRRANLQESNQQEKSQN 221 Query: 332 RRIDILVEDRQ 342 RRIDI ++ Sbjct: 222 RRIDIRFTVKK 232 >gi|227821156|ref|YP_002825126.1| OmpA/MotB domain protein [Sinorhizobium fredii NGR234] gi|227340155|gb|ACP24373.1| OmpA/MotB domain protein [Sinorhizobium fredii NGR234] Length = 309 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 36/249 (14%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + Y S + + + + +E + + K+E L L Sbjct: 41 SQFNVSDTVPRPLYDSLKDEKDRIQRDIDAIAEIVEANGRPVVTATREMKDELERLRKLL 100 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 A K + +A + L+ L ++ + + ++ +FD Sbjct: 101 NTPEKANKMEVYNSAVADARKNLLTSLKSEINSRIPGVNVAVSANYDALQ-FAGDGLFDS 159 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVI----------------------SIRGHTDASPF 277 +P V +++I EVL + + GHTD+ Sbjct: 160 GKEVPTTVGAVRMRQIAEVLDQNLGCYSLGSRRAFTENCNPAFALIDSLQVEGHTDSV-- 217 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVS----EDR----ISKISGFAHHRLKIASDPMNS 329 N LS RA S Y ++++ ++R + ++GF R ++ + Sbjct: 218 -GSEVLNMDLSAKRAASIYALMIEQKPDLVLYQNRDEQPVLSVAGFGKGRPIQQNETESG 276 Query: 330 A--NRRIDI 336 NRRID+ Sbjct: 277 RDANRRIDL 285 >gi|153207149|ref|ZP_01945928.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii 'MSU Goat Q177'] gi|161831560|ref|YP_001596059.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii RSA 331] gi|165918434|ref|ZP_02218520.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii RSA 334] gi|120576810|gb|EAX33434.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii 'MSU Goat Q177'] gi|161763427|gb|ABX79069.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii RSA 331] gi|165917940|gb|EDR36544.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii RSA 334] Length = 182 Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 7/141 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + + ++ I + T FD S+ + ++ L Sbjct: 42 AQAYALAEGKGYQGQLKKDSEGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYL 101 Query: 260 AHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 A + + + G+TD N L R + ++L + GV+ +I +S + Sbjct: 102 ATHSTAKVRLEGNTDNR---GSREYNIGLGWRRDQAVARILEQEGVAPKQIDMVS-YGKE 157 Query: 319 RLKI--ASDPMNSANRRIDIL 337 R + ++ NRR++++ Sbjct: 158 RPAVMGNNENAWRLNRRVNLI 178 >gi|331006081|ref|ZP_08329417.1| OmpA/MotB domain containing protein [gamma proteobacterium IMCC1989] gi|330420118|gb|EGG94448.1| OmpA/MotB domain containing protein [gamma proteobacterium IMCC1989] Length = 262 Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 8/117 (6%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARD 283 ++ ++ + L ++ + + + + I GHTD+ + D Sbjct: 96 VNFSQIEKKSLYYNDAEELKSSARRYLNQVADYVKEDPAVKTVYIDGHTDSV---GVRAD 152 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 N S +R L++ GVS D I + + NRR+ + + Sbjct: 153 NLEKSKERTALVVDYLVEKGVSPDMIVA-RWHGERYQVATNQTAKGRATNRRVTLRL 208 >gi|126736504|ref|ZP_01752245.1| OmpA/MotB [Roseobacter sp. CCS2] gi|126714042|gb|EBA10912.1| OmpA/MotB [Roseobacter sp. CCS2] Length = 526 Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 57/188 (30%), Gaps = 11/188 (5%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + ++ + L E + + ++ + + + + + Sbjct: 338 PEHAKGMLDFALSEEAQGLISEAGFIDQTIREASVDSQGLRVASAVVANRDFSTFPQLQQ 397 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASP 276 + IS T F+ SS + ++ +L+ G TD+ Sbjct: 398 MMEQL-ISSDRLSTTFRFETGSSNLDARAQDDIVRLARLLSSDAYRNKEAVFVGFTDSV- 455 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSG--VSEDRISKISGFAHHRLK--IASDPMNSANR 332 N +LS RA Q L+ + + + G+ ++ NR Sbjct: 456 --GDPELNRQLSERRAGQVVQELLDENPDLQSNVALQTIGYGEISPLGCNETNTGRRINR 513 Query: 333 RIDILVED 340 R+++ V D Sbjct: 514 RVEVWVRD 521 >gi|282865311|ref|ZP_06274363.1| OmpA/MotB domain protein [Streptomyces sp. ACTE] gi|282559784|gb|EFB65334.1| OmpA/MotB domain protein [Streptomyces sp. ACTE] Length = 213 Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 10/185 (5%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 I + P S ++ DL +TL+ +I V Sbjct: 29 DIPQAVADDSPYPSASAEPPVEVDANDSDLKLPEGATLAPPKVLDIKSVVEDLGGEERRE 88 Query: 226 ISIID----QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI 280 + D + +F K S+ + + I + + + + + G TD Sbjct: 89 DTNADIKFALQAEVLFGKDSAKLSSDANSRINAIAAEIKNQDAKKVRVFGFTDNL---GS 145 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + LS +RA + + VL S +I G+ + NRR+++ Sbjct: 146 SEHGDVLSKERAEAVHNVLDASLAGTGITFEIRGYGEQYPIADNSSEEGRKKNRRVEVSF 205 Query: 339 EDRQG 343 + +G Sbjct: 206 QRTEG 210 >gi|159184962|ref|NP_354858.2| OmpA family protein [Agrobacterium tumefaciens str. C58] gi|159140240|gb|AAK87643.2| OmpA family protein [Agrobacterium tumefaciens str. C58] Length = 746 Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285 +T F S+ L+K+ + + + E I GHTDA N Sbjct: 626 DLDTITFATGSADIPMAQARSLRKVADAINKALQKNPAETFLIEGHTDAV---GSDESNL 682 Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS +RA S VL G+ + + G+ LK+ + NRR+ I Sbjct: 683 VLSDERAASVANVLTDVYGIPPENL-ATQGYGERYLKVQTLGPEQQNRRVTI 733 >gi|149918137|ref|ZP_01906630.1| OmpA family protein [Plesiocystis pacifica SIR-1] gi|149821142|gb|EDM80548.1| OmpA family protein [Plesiocystis pacifica SIR-1] Length = 158 Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 10/111 (9%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLS 288 ++ +F S+ + L + + GHTD N L Sbjct: 52 KDEALFAYDSAKLSEKAERTLALLARCFDTGPMRYQDLLVTGHTDPR---GSDEYNLDLG 108 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILV 338 L+RA + L+ GV + RI R ++DP +R+++I + Sbjct: 109 LERAVAVRDYLVDEGVEDFRIEA-RSVGERR--ASNDPEDWDDDRKVEIQL 156 >gi|118578704|ref|YP_899954.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM 2379] gi|118501414|gb|ABK97896.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379] Length = 201 Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 10/107 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F SS + L K+ + + + + GHT N +LS RA + Sbjct: 104 FRFDSSSLSHADLGGLDKLSKEIFA-GSTVDLTGHTCTI---GTDDYNKKLSFRRAEAVA 159 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343 L GV+ I I G + D NRR++I+ ++G Sbjct: 160 TALKARGVN---IGTIEGRGKCCP-ASQD--KRQNRRVEIIGIRKEG 200 >gi|42521994|ref|NP_967374.1| outer membrane protein A [Bdellovibrio bacteriovorus HD100] gi|39574525|emb|CAE78367.1| outer membrane protein A [Bdellovibrio bacteriovorus HD100] Length = 171 Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ SS + L +I L ++ I G TD A N RLS RA Sbjct: 68 FNVGSSELNASSRRALNEIASELKNTANSYEKIRISGLTDPQ---GDADRNLRLSEARAT 124 Query: 294 SAYQVLMKSGVSEDRISKISGFAH-HRLKIASDPMNSANRRIDILVED 340 L+ GV ED++ + G R + + + +RR+D + + Sbjct: 125 RVRDYLVSRGVPEDKLETV-GKGAVARDTLGTSSQMARDRRVDFEIVE 171 >gi|86136231|ref|ZP_01054810.1| hypothetical protein MED193_18949 [Roseobacter sp. MED193] gi|85827105|gb|EAQ47301.1| hypothetical protein MED193_18949 [Roseobacter sp. MED193] Length = 367 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 75/243 (30%), Gaps = 41/243 (16%) Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 LS Q +L + ++ + EE L K ++R + + Sbjct: 100 LSELDQLRDENEALRARVAELEEENEHLRSRIDQLVEEIERLREEIKRLRDKIERLQVVN 159 Query: 194 DLAKKISSTLSG--LVADNIVKGVLFETTRTGILISIIDQ----RNTPMFDKSSSIPLPE 247 L +S + + + +L E ++IS + +F S Sbjct: 160 PLEAYLSQAIDQRREILVELRDRLLIEFPELQVVISPEQDALRFQGEGLFRSGSPQLERR 219 Query: 248 TIVVLQKIGEVLAHSTEVI----------------------SIRGHTDASPFRNIARDNW 285 +++ +G +L I GHTD+ DN Sbjct: 220 QRAIVETMGRLLDEILVCFTLGERAERGPDCESGNALIEAVQIEGHTDSDR---GRIDNV 276 Query: 286 RLSLDRAYS--------AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRID 335 LS RA +L + + + +SG+ R ++ +ANRRID Sbjct: 277 TLSTRRANETFFAIREEVAGILAHRNLRDQPVMSVSGYGEMRPIETNETTEGKAANRRID 336 Query: 336 ILV 338 + + Sbjct: 337 LRI 339 >gi|183219680|ref|YP_001837676.1| hypothetical protein LEPBI_I0255 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909816|ref|YP_001961371.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774492|gb|ABZ92793.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778102|gb|ABZ96400.1| Hypothetical protein LEPBI_I0255 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 348 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F K S + + E L + ++GHT F +N LS +RA Sbjct: 242 FIKQSMATEDGAADKIATLAEALKTYPSIKVRVKGHTC---FIGEMDENKILSDERAKFI 298 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 Y L+K+GV++ ++ GF + + NRR+D V Sbjct: 299 YDELIKNGVNQSQLD-YRGFGETAEIDTNQTESGRIKNRRVDFTVLS 344 >gi|302124486|gb|ADK93849.1| peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa] Length = 151 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L S + + + GHTD N L RA + Sbjct: 84 FEYDSSDLKPEAMRALDVHAKDLKGSGQRVVLEGHTDER---GTREYNMALGERRAKAVQ 140 Query: 297 QVLMKSGVSE 306 + L+ GVS Sbjct: 141 RYLVLQGVSP 150 >gi|73539667|ref|YP_300034.1| OmpA/MotB:SmpA/OmlA [Ralstonia eutropha JMP134] gi|72123004|gb|AAZ65190.1| OmpA/MotB:SmpA/OmlA [Ralstonia eutropha JMP134] Length = 292 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 29/254 (11%), Positives = 65/254 (25%), Gaps = 17/254 (6%) Query: 96 NKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGK 155 + T +V ++ +Q + L ++ +L + Sbjct: 37 STTSSHPTNQGTSANVVFPDKASAWPEQGTFPNLDSLRLLQPGMTKDQHYALIGRPHFNE 96 Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 + + + N P + + + + + + Sbjct: 97 GMADVREWDYLFNFRTGKPAPNDVVQCQMKVLFDTAMASRSYYWAPESCAAFLRYPETPA 156 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTE--VISIRG 270 + +F + S P + +G+ LA + + Sbjct: 157 AMPAIVQTTATTTTTLGADALFTFNGSTAAELVPNGHARIDALGQQLAGMKMLKHVDVYA 216 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----- 325 +TD N RLS RA + +L+ GV R+ G Sbjct: 217 YTDRL---GTDAYNKRLSQQRADTVKSLLVAQGVD-SRLVTAQGMGKADPLSHCGAMPRP 272 Query: 326 ---PMNSANRRIDI 336 + +RR++I Sbjct: 273 KLITCLAPDRRVEI 286 >gi|297537840|ref|YP_003673609.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301] gi|297257187|gb|ADI29032.1| OmpA/MotB domain protein [Methylotenera sp. 301] Length = 261 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 11/105 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + + L + L + + ++ G++D N LS RA + Sbjct: 166 FDTGKTTLPSDASQTLAATIKWLKAYSSMKAVISGYSDPR---GDLAKNEELSKSRAKAV 222 Query: 296 YQVLMKSGVSEDRISKISGFAHHRL-KIASDPMNSANRRIDILVE 339 ++L +G+ EDRI + + S A RR+++ +E Sbjct: 223 REMLEDAGIDEDRIEM------RKPEIVESGGDLGAARRVEVSIE 261 >gi|104782093|ref|YP_608591.1| periplamic phosphate-binding protein [Pseudomonas entomophila L48] gi|95111080|emb|CAK15800.1| putative periplamic phosphate-binding protein [Pseudomonas entomophila L48] Length = 435 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 76/262 (29%), Gaps = 14/262 (5%) Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCK 144 D E +D E + + + R L+ ++ Sbjct: 179 DRSGTFETFKARVLDPQHGELSPQARRFESADALAGQVLADRQAIGFSGLATVHGAKVLA 238 Query: 145 NSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST-- 202 + L + +++ ++LP +K A+ + ++ Sbjct: 239 VAEGDAPALPPSLALVASEDYPVSRRLFFYLPGNAKPLARALAEFAQSPAGQAIVAEQGF 298 Query: 203 -LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA- 260 + A + + F + S+ + + +Q++G+ L Sbjct: 299 VAQQIKALPVTVQPGMPPRYRALASEARRLTVNFRFQEGSASLDNKALRDVQRVGDYLRH 358 Query: 261 --HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 E + G D A LS RA + + L ++GV + ++G Sbjct: 359 AGKLHEQAVLVGFGDPKETPGRAAL---LSRLRAMAVRRELARAGVE---VKDVAGMGDE 412 Query: 319 RLKIASDPMNS--ANRRIDILV 338 +D NRR+++ V Sbjct: 413 LPVAGNDLEQGRLRNRRVEVWV 434 >gi|323705966|ref|ZP_08117537.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323534764|gb|EGB24544.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 230 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 57/175 (32%), Gaps = 25/175 (14%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 +K ++ ++ + ++ L+ + + IS + FDK Sbjct: 45 AQKAKVDEIIGVRARIINQLLNEFKNSDLSLSIDPQTGAISFSE---GIFFDKDKFELKD 101 Query: 247 ETIVVLQK---------IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 E L + + I + GHTD + N LS RA+ + Sbjct: 102 EGKRYLNEFFPRYISILMDPKFKKYISQIIVEGHTDDT---GDYVYNLELSQKRAFEVVR 158 Query: 298 VLMK---SGVSEDR------ISKISGFAHHRLKIASDP-MNSANRRIDILVEDRQ 342 +++ G+ +G ++ +L I + +RR++ ++ Sbjct: 159 YILQSDIKGIDSKVKSDLMPYITANGRSYSQLIIENGKVNREKSRRVEFKFRLKE 213 >gi|109896581|ref|YP_659836.1| OmpA/MotB [Pseudoalteromonas atlantica T6c] gi|109698862|gb|ABG38782.1| OmpA/MotB [Pseudoalteromonas atlantica T6c] Length = 368 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 8/113 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRA 292 +F +S+ ++ + ++ G+ A + N LS +RA Sbjct: 254 RILFANNSAEIANRANSDIRDFAAFMKRFPSTDTVIEGYASA---PGESDYNQWLSEERA 310 Query: 293 YSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDRQ 342 + VL++ + RI+ + GF +L A + NRRI V + Sbjct: 311 KAVRMVLIEDYDIKPARITAV-GFGESKLLDAPTAKEANKINRRIVARVSASK 362 >gi|89076000|ref|ZP_01162369.1| probable peptidoglycan-associated lipoprotein precursor [Photobacterium sp. SKA34] gi|89048291|gb|EAR53871.1| probable peptidoglycan-associated lipoprotein precursor [Photobacterium sp. SKA34] Length = 174 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 47/150 (31%), Gaps = 5/150 (3%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L +S ++ G +I FD L Sbjct: 16 LQGCVSDRAIYADYGDLACGTTVIEAPAPAIIPSDQWPVAVYFDFDKHDLQMSEQSQLDL 75 Query: 255 IGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 ++L+ + + G D+ A+ N +L+L RA G+ R+ +S Sbjct: 76 ASKILSDNPRYRVAVIGSADSM---GGAKYNDKLALKRAKVVADYFFSKGIDRSRMVTLS 132 Query: 314 GFAHHRLKIASDPMNSA-NRRIDILVEDRQ 342 + + ++ D + NRR +++ Sbjct: 133 SGSREQFIVSKDREVNRVNRRAQLILLGAN 162 >gi|261885573|ref|ZP_06009612.1| Omp18 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 72 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 6/75 (8%) Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + G+ D N+ L + RA +A L+ GVS DRI +I+ + Sbjct: 1 MVEGNCDEW---GSDEYNYALGVKRAKTAKDALVAQGVSADRI-EITSNGESKPVCTERT 56 Query: 327 MN--SANRRIDILVE 339 + NRR + + Sbjct: 57 KACDAQNRRDEFKIL 71 >gi|257125830|ref|YP_003163944.1| Outer membrane protein and related peptidoglycan- associated (lipo)protein-like protein [Leptotrichia buccalis C-1013-b] gi|257049769|gb|ACV38953.1| Outer membrane protein and related peptidoglycan- associated (lipo)protein-like protein [Leptotrichia buccalis C-1013-b] Length = 254 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 72/203 (35%), Gaps = 17/203 (8%) Query: 152 EKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNI 211 EK ++ K+ D + N Y S+ A + + +I+ +V Sbjct: 41 EKLEEKIKNGDKKAINNLGNLYAKDENSRNIPKAKEYYRLAIKNGSEIARKNLEIVNKLP 100 Query: 212 VKGVLFETTRTGILISIIDQRNTPM------FDKSSSIPLPETIVVLQKIGEVLAHST-- 263 I +++ + F +++ E + + Sbjct: 101 KLCPERSICENWTTIRFVEKDGKIVKMIIRGFPIDKEEVNKTEKQAIKEEIEYMLNVFFE 160 Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSED-RISKISGFAHHRLK 321 E I G+ D + +LSL RA + L ++G+ +D +I+K+ G Sbjct: 161 NEEFEIVGYADKTENNKN-----KLSLLRAEKMSEFLKQNGLRKDIKITKMIGKGSENPI 215 Query: 322 IASDPMNSA--NRRIDILVEDRQ 342 +D + NRR++IL+++ + Sbjct: 216 DTNDTVEGRYNNRRVEILLKNGK 238 >gi|109947175|ref|YP_664403.1| peptidoglycan-associated lipoprotein precursor [Helicobacter acinonychis str. Sheeba] gi|109714396|emb|CAJ99404.1| peptidoglycan-associated lipoprotein precursor [Helicobacter acinonychis str. Sheeba] Length = 181 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 69 IESGTIIASIYFDFDKYEIKDSDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 125 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 L + R S L+ GV +D I IS F + K NRR+D+ + Sbjct: 126 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGEIKPKCIQKTKECYKENRRVDVKL 179 >gi|152979448|ref|YP_001345077.1| peptidoglycan-associated lipoprotein [Actinobacillus succinogenes 130Z] gi|150841171|gb|ABR75142.1| Peptidoglycan-associated lipoprotein [Actinobacillus succinogenes 130Z] Length = 152 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 9/109 (8%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 + + NT F E +L L + + + G+ D N Sbjct: 45 LQQRYNTVYFAFDRYDIEGEYQQLLDAHAAYLTATPAAKVLVEGNADER---GTPEYNIA 101 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 L RA + L G + IS +S + + + + NRR Sbjct: 102 LGQRRADAVKNYLSAKG--ANNISTVS-YGEEKPAVLGHDEAAYAKNRR 147 >gi|241668774|ref|ZP_04756352.1| outer membrane associated protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 390 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 3/100 (3%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F S+ + + + +S + ++++G+ + N +LS RA + Sbjct: 280 FAYDSANLNSKGKEAIASFVNFVKNSDIKTVTVKGYASQGTTGSEFEIYNQKLSERRAEA 339 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 + + G+ DRI GF + ++ N+R+ Sbjct: 340 VADYMKQLGLDNDRIIT-KGFGYENTLDGIHKSDARNQRV 378 >gi|167765428|ref|ZP_02437541.1| hypothetical protein BACSTE_03818 [Bacteroides stercoris ATCC 43183] gi|167697056|gb|EDS13635.1| hypothetical protein BACSTE_03818 [Bacteroides stercoris ATCC 43183] Length = 396 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 33/250 (13%), Positives = 70/250 (28%), Gaps = 5/250 (2%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 K Y N G + + + + + TK + Sbjct: 124 YKQRFDYMNFHGDVMFNLNALFGGYNEDRVYEIIPYLGAGLTHNYTKPHRQALALNAGII 183 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +++ L S K T + + +T + + P Sbjct: 184 NRFRISNAIDINLELSAMGAEDKFDGTVAGKGYDGVFSATLGLTYHFPKRGFNRPTPQLI 243 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 L + ++ + L + K + T ++ T F S Sbjct: 244 SALELSAMQQQIAEMAAANQQLESALTAAQNKPMEVAETEV-VVTDPNIAPRTVFFKIGS 302 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + P ++ + + + + + G+ D+ N LSL RA + VL+ Sbjct: 303 AEVSPREVMNISYLAKQMQEFPNTTYTVNGYADS--ATGTPEFNKELSLKRAQAVVDVLV 360 Query: 301 K-SGVSEDRI 309 K G+ +R+ Sbjct: 361 KDYGIPANRL 370 >gi|57505391|ref|ZP_00371319.1| probable flagellar motor protein Cj0336c [Campylobacter upsaliensis RM3195] gi|57016216|gb|EAL53002.1| probable flagellar motor protein Cj0336c [Campylobacter upsaliensis RM3195] Length = 244 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 72/184 (39%), Gaps = 2/184 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ +W I+ T+ +A++ F + T Sbjct: 3 KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISETNPAKVEALKTEFVKIF-DYTT 60 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + QN + + ++ E + + ++ + K + EN I S+ Sbjct: 61 TQAVKTESQNTEKHAGASRTPNDEVEALKRLTLSQQETIKKLKAALDQSENQIALNLPSR 120 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 ++ ++ L + L S+ + + + A++ + + AK Sbjct: 121 VEFAKNSAEIVSADMQDYLKRMAQLSLSLPPQAKIEIRGFTDNSDSALRSFELGYERAKA 180 Query: 199 ISST 202 + + Sbjct: 181 VMNY 184 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 62/191 (32%), Gaps = 10/191 (5%) Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 ++ K T+ K + + S+ + D + + Sbjct: 39 ETNPAKVEALKTEFVKIFDYTTTQAVKTESQNTEKHAGASRTPNDEVEALKRLTLSQQET 98 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA---HSTEVI 266 + + I +++ + F K+S+ + + K L+ I Sbjct: 99 IKKLKAALDQSENQIALNLPSRVE---FAKNSAEIVSADMQDYLKRMAQLSLSLPPQAKI 155 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 IRG TD S + L +RA + + GVS +++ I + + + Sbjct: 156 EIRGFTDNSDSALRSF---ELGYERAKAVMNYFIDGGVSVEKL-SIKSYGFNEPLLNHAS 211 Query: 327 MNSANRRIDIL 337 + AN R++I Sbjct: 212 SDLANNRVEIY 222 >gi|331014336|gb|EGH94392.1| OmpA family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 447 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 11/108 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F +SS+ + L+++ E L + +++ G DA A LS RA Sbjct: 346 FAQSSARLDNKAQQDLKRVAEYLKASGKLNQQVTLVGFGDAKSDPARAAL---LSRLRAM 402 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + + L+KSGV+ I G +D + NRR+++ V+ Sbjct: 403 AVRRELIKSGVT---FRDILGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447 >gi|315638943|ref|ZP_07894114.1| flagellar motor protein MotB [Campylobacter upsaliensis JV21] gi|315480972|gb|EFU71605.1| flagellar motor protein MotB [Campylobacter upsaliensis JV21] Length = 244 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 72/184 (39%), Gaps = 2/184 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ +W I+ T+ +A++ F + T Sbjct: 3 KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISETNPAKVEALKTEFVKIF-DYTT 60 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQ 138 + QN + + ++ E + + ++ + K + EN I S+ Sbjct: 61 TQAVKTESQNTEKHAGASRTPNDEVEALKRLTLSQQETIRKLKAALDQSENQIALNLPSR 120 Query: 139 QSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK 198 ++ ++ L + L S+ + + + A++ + + AK Sbjct: 121 VEFAKNSAEIVSADVQDYLKRMAQLSLSLPPQAKIEIRGFTDNSDSALRSFELGYERAKA 180 Query: 199 ISST 202 + + Sbjct: 181 VMNY 184 Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F K+S+ + + K L+ I IRG TD S + L +RA Sbjct: 123 FAKNSAEIVSADVQDYLKRMAQLSLSLPPQAKIEIRGFTDNSDSALRSF---ELGYERAK 179 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + + GVS ++ I + + + P + AN R++I Sbjct: 180 AVMNYFIDGGVSVGKL-SIKSYGFNEPLLNHAPSDLANNRVEIY 222 >gi|330446492|ref|ZP_08310144.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490683|dbj|GAA04641.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 279 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 54/155 (34%), Gaps = 8/155 (5%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 +++ + L +S+ + + + I+ +D++S Sbjct: 125 QDWQRQNRTLEVGLSAVSFQKGYQDFSQCLNKLLPYGFEDIAFSVLH----YDENSDTLN 180 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + L KI + + +S +V + + +S RA + + G+ Sbjct: 181 KISQQRLAKIADFVRYSDDVDLVLVASFNDSLAGTTES-QDMSEHRAENLRKYFKSLGLP 239 Query: 306 EDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 EDR+ +I + R + S NRR+ I + Sbjct: 240 EDRV-QIEAYGKRRPIADNSTPIGRSLNRRVVISL 273 >gi|260363440|ref|ZP_05776286.1| outer membrane protein [Vibrio parahaemolyticus K5030] gi|308113738|gb|EFO51278.1| outer membrane protein [Vibrio parahaemolyticus K5030] Length = 166 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 47/151 (31%), Gaps = 5/151 (3%) Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 ++ ++ LQD L + + + Sbjct: 17 QQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAGSEVDNDGCGEYIKASE 76 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLS 288 + +F S P ++++ + L I ++G+ + ++ N LS Sbjct: 77 KMQVRVLFANDSDEINPVFRRQIRELSDFLKDYPTTSIELQGYASKT---GGSKHNQDLS 133 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 RA + L+ G+ +R+ +I GF Sbjct: 134 ERRAKNVRDALLSYGIEPNRV-RIIGFGDTH 163 >gi|15641766|ref|NP_231398.1| chemotaxis protein MotB-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585850|ref|ZP_01675644.1| hypothetical protein VC274080_1816 [Vibrio cholerae 2740-80] gi|121727708|ref|ZP_01680803.1| hypothetical protein VCV52_1737 [Vibrio cholerae V52] gi|147673520|ref|YP_001217304.1| hypothetical protein VC0395_A1361 [Vibrio cholerae O395] gi|153819630|ref|ZP_01972297.1| hypothetical protein A5C_1796 [Vibrio cholerae NCTC 8457] gi|153821127|ref|ZP_01973794.1| hypothetical protein A5E_2064 [Vibrio cholerae B33] gi|227081908|ref|YP_002810459.1| chemotaxis protein MotB-related protein [Vibrio cholerae M66-2] gi|229508134|ref|ZP_04397639.1| chemotaxis protein MotB-related protein [Vibrio cholerae BX 330286] gi|229511627|ref|ZP_04401106.1| chemotaxis protein MotB-related protein [Vibrio cholerae B33] gi|229518766|ref|ZP_04408209.1| chemotaxis protein MotB-related protein [Vibrio cholerae RC9] gi|229607695|ref|YP_002878343.1| chemotaxis protein MotB-related protein [Vibrio cholerae MJ-1236] gi|255744822|ref|ZP_05418772.1| chemotaxis protein MotB-related protein [Vibrio cholera CIRS 101] gi|262161895|ref|ZP_06030913.1| chemotaxis protein MotB-related protein [Vibrio cholerae INDRE 91/1] gi|262169763|ref|ZP_06037454.1| chemotaxis protein MotB-related protein [Vibrio cholerae RC27] gi|298498167|ref|ZP_07007974.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9656285|gb|AAF94912.1| chemotaxis protein MotB-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549988|gb|EAX60006.1| hypothetical protein VC274080_1816 [Vibrio cholerae 2740-80] gi|121630005|gb|EAX62413.1| hypothetical protein VCV52_1737 [Vibrio cholerae V52] gi|126509834|gb|EAZ72428.1| hypothetical protein A5C_1796 [Vibrio cholerae NCTC 8457] gi|126521323|gb|EAZ78546.1| hypothetical protein A5E_2064 [Vibrio cholerae B33] gi|146315403|gb|ABQ19942.1| hypothetical protein VC0395_A1361 [Vibrio cholerae O395] gi|227009796|gb|ACP06008.1| chemotaxis protein MotB-related protein [Vibrio cholerae M66-2] gi|227013663|gb|ACP09873.1| chemotaxis protein MotB-related protein [Vibrio cholerae O395] gi|229343455|gb|EEO08430.1| chemotaxis protein MotB-related protein [Vibrio cholerae RC9] gi|229351592|gb|EEO16533.1| chemotaxis protein MotB-related protein [Vibrio cholerae B33] gi|229355639|gb|EEO20560.1| chemotaxis protein MotB-related protein [Vibrio cholerae BX 330286] gi|229370350|gb|ACQ60773.1| chemotaxis protein MotB-related protein [Vibrio cholerae MJ-1236] gi|255737293|gb|EET92688.1| chemotaxis protein MotB-related protein [Vibrio cholera CIRS 101] gi|262021997|gb|EEY40707.1| chemotaxis protein MotB-related protein [Vibrio cholerae RC27] gi|262028627|gb|EEY47282.1| chemotaxis protein MotB-related protein [Vibrio cholerae INDRE 91/1] gi|297542500|gb|EFH78550.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 244 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 67/191 (35%), Gaps = 27/191 (14%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L+++ + L+ + + + + + V+ E +I I + T Sbjct: 44 ELTQKTNDVEAGIEELKQAELARKNIIYDVRDELAKRNVIVEIADNDTVIRIPESTLT-- 101 Query: 237 FDKSSSIPLPETIV-----------VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 F S + + + + I I GHTD+ + NW Sbjct: 102 FASGKSSIPNDATIQQAVKDIGVVLHSAIQKKDRFQYLDTIFIEGHTDSDSIHYRGKGNW 161 Query: 286 RLSLDRAYSAYQVLM-------KSGVSED----RISKISGFAHHRLKI---ASDPMNSAN 331 LS DRA S + V K G E+ ++ +SG+A R A+ S N Sbjct: 162 GLSTDRAISVWNVWQNELSLTPKLGDLENAYHAKLFSVSGYAATRRANLHEANQQEKSQN 221 Query: 332 RRIDILVEDRQ 342 RRIDI ++ Sbjct: 222 RRIDIRFTVKK 232 >gi|77359582|ref|YP_339157.1| outer membrane protein [Pseudoalteromonas haloplanktis TAC125] gi|76874493|emb|CAI85714.1| conserved protein of unknown function ; putative outer membrane protein [Pseudoalteromonas haloplanktis TAC125] Length = 244 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 52/165 (31%), Gaps = 10/165 (6%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-RNTPM 236 + + + + LS VL I + T Sbjct: 71 ADNKIAQQQRAIIVMTEKTNDYQHLLSHNSQLEQQIEVLANQNEQLTQSQINNLLAMTVQ 130 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S + P + L ++ +L + + + + G D + N LS R + Sbjct: 131 FKTGSRVIAPHFALQLDQLVTLLKNQPQLALDLSGFADQR---GDEQANLLLSKARVNAV 187 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDIL 337 L+K GVS R+S F + ++ + N RR+ + Sbjct: 188 QSYLIKQGVSHTRLST-QAFGEQQTLAKTNTVED-NTFDRRVTLT 230 >gi|126730914|ref|ZP_01746723.1| OmpA family protein [Sagittula stellata E-37] gi|126708630|gb|EBA07687.1| OmpA family protein [Sagittula stellata E-37] Length = 198 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 10/104 (9%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S + + I GHTD+ N +LS A Sbjct: 100 FFATDSYKISKHGQAQIANFFRSSSAVG--FVIAGHTDSR---ASDAYNMKLSY---NRA 151 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 V + I+ + G+ ++ + NRR++IL Sbjct: 152 LAVARVARAVGANITDVRGYGERMPVASNATAAGMAKNRRVEIL 195 >gi|325293279|ref|YP_004279143.1| outer membrane protein, OmpA family protein [Agrobacterium sp. H13-3] gi|325061132|gb|ADY64823.1| putative outer membrane protein, OmpA family protein [Agrobacterium sp. H13-3] Length = 771 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285 +T F S+ L+K+ + + E I GHTDA N Sbjct: 651 DLDTITFATGSADIPMAQARSLRKVADAINKALAKNPAETFLIEGHTDAV---GSDESNL 707 Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS +RA S VL G+ + + G+ LK+ + NRR+ I Sbjct: 708 VLSDERAASVANVLTDVYGIPPENL-ATQGYGERYLKVQTLGPEQQNRRVTI 758 >gi|302521646|ref|ZP_07273988.1| secreted protein [Streptomyces sp. SPB78] gi|302430541|gb|EFL02357.1| secreted protein [Streptomyces sp. SPB78] Length = 205 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 + +FDK P ++ IGE + G TD LS Sbjct: 96 QAEVLFDKDKFALDPSGRARIKAIGEEAKKQRARTVRVFGFTDNL---GSYAHGKTLSKR 152 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 RA + L + + + ++ G++ + NRR+++ Sbjct: 153 RADIVHDELAQY-LGPEVTFEVRGYSEDYPIADNTTEEGRRKNRRVEV 199 >gi|319782061|ref|YP_004141537.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167949|gb|ADV11487.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 743 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 64/190 (33%), Gaps = 11/190 (5%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 + +D + L +E IL + + D + + + Sbjct: 545 DERHYEDDSDWRDPGDDLPPMRLTIPRREYILDSEDVESPDDYYEFLEQP-PVEKVQRLY 603 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVIS 267 + + I+ +T F+ S+ + L+ + + + E Sbjct: 604 SIDEVKRSARVRDIARRVDLDTLNFEFGSASISDTEVQKLEGVATAMEKLLKKNPAETFL 663 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDP 326 I GHTDA N LS RA + + L + G+ + ++ G+ LK+ + Sbjct: 664 IEGHTDAV---GTPEANLALSDRRAEAVAEALTNAFGIPPENLTT-QGYGEEYLKVNTAA 719 Query: 327 MNSANRRIDI 336 N NRR+ I Sbjct: 720 PNRENRRVAI 729 >gi|254877305|ref|ZP_05250015.1| outer membrane associated protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843326|gb|EET21740.1| outer membrane associated protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 391 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 3/100 (3%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F S+ + + + +S + ++++G+ + N +LS RA + Sbjct: 281 FAYDSANLNSKGKEAIASFVNFVKNSDIKTVTVKGYASQGTTGSEFEIYNQKLSERRAEA 340 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 + + G+ DRI GF + ++ N+R+ Sbjct: 341 VADYMKQLGLDNDRIIT-KGFGYENTLDGIHKSDARNQRV 379 >gi|13472197|ref|NP_103764.1| hypothetical protein mlr2412 [Mesorhizobium loti MAFF303099] gi|14022942|dbj|BAB49550.1| mlr2412 [Mesorhizobium loti MAFF303099] Length = 754 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 62/185 (33%), Gaps = 11/185 (5%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 D + L ++ IL + + D + V + Sbjct: 561 QDEGDWRDPGDDLPPMRLTIPRRDYILDSEDVQSPDDYYTFLDQPPVERV-QRLYSIDEV 619 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHT 272 + + I+ +T F+ SS + L+ + + + E I GHT Sbjct: 620 KRSARVRDIARRVDLDTLNFEFGSSSISDTEVQKLEGVASAMEKLLKKNPAETFLIEGHT 679 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSAN 331 DA N LS RA + + L + G+ + ++ G+ LK+ + N N Sbjct: 680 DAV---GTPEANLALSDRRAEAVAEALTNAFGIPPENLTT-QGYGEQYLKVNTQAPNREN 735 Query: 332 RRIDI 336 RR+ I Sbjct: 736 RRVAI 740 >gi|90419554|ref|ZP_01227464.1| conserved hypothetical protein, OmpA family [Aurantimonas manganoxydans SI85-9A1] gi|90336491|gb|EAS50232.1| conserved hypothetical protein, OmpA family [Aurantimonas manganoxydans SI85-9A1] Length = 388 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 10/106 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDR 291 F+ S+ E + L+ + + +A E I GHTDA R N LS R Sbjct: 272 FNFGSAEITQEEVGDLRALADAIARVIAENPDETFLIEGHTDAV---GSERANLALSDRR 328 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 A L + V + + G+ LK+ + N NRR+ + Sbjct: 329 ADGVATALTQYFDVPPENLVT-QGYGEQDLKVDTQAENRENRRVTV 373 >gi|284046858|ref|YP_003397198.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684] gi|283951079|gb|ADB53823.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684] Length = 615 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 72/253 (28%), Gaps = 10/253 (3%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 +P + D + ++ Sbjct: 360 SPSVSPLAGAVRRPPSADPPPAQRDDAACEPPRIERSVPSRPLPGRRVMLTGRGFGARPD 419 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 + + S I + LP + R L +++ T + V Sbjct: 420 RVEVDGRAVRSVSYWTPTRIVFQLPGDLPDGGTVVVRRGTAASRGYPLNPRMTGTGAAAV 479 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVI 266 D V+ S +D + +F S P I +++ + E L + Sbjct: 480 PDE-RDAVMDGAVCDARAGSTVDLDSGALFAYDSVQLRPGAIELVEGLCERRLLEGAATL 538 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + G+TDA+ A N LS +A VL+ V+ R + G R + Sbjct: 539 LVVGYTDAT---GPAAYNRVLSRRQAARVRDVLLGEAVTRPRTVVVRGLGEARPR----T 591 Query: 327 MNSANRRIDILVE 339 + N RI I+V Sbjct: 592 DGADN-RIRIVVR 603 >gi|89256632|ref|YP_513994.1| outer membrane associated protein [Francisella tularensis subsp. holarctica LVS] gi|167011028|ref|ZP_02275959.1| outer membrane associated protein [Francisella tularensis subsp. holarctica FSC200] gi|89144463|emb|CAJ79767.1| outer membrane associated protein [Francisella tularensis subsp. holarctica LVS] Length = 392 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 20/198 (10%), Positives = 55/198 (27%), Gaps = 9/198 (4%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + D + + + + + L I Sbjct: 191 GANGRAGTNMIGAGLTWFFGGKDTTNNDTGNIQDNGATTAAQTVAMPTIDESKYVLPAGI 250 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + GV T + +D + F + + + + Sbjct: 251 KQ--CEGNFNLTEDGVACYTVNGDEVTVYLDTK----FAYDKATLNAKGKKAIASFVNFI 304 Query: 260 AH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + ++++G+ + N +LS RA + + + G+ ++I GF + Sbjct: 305 KDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQAVADYMKQLGLDSEKIIT-KGFGY 363 Query: 318 HRLKIASDPMNSANRRID 335 + + N+R++ Sbjct: 364 NDTLGGIHKSDPRNQRVE 381 >gi|37676263|ref|NP_936659.1| outer membrane protein [Vibrio vulnificus YJ016] gi|37200804|dbj|BAC96629.1| outer membrane protein [Vibrio vulnificus YJ016] Length = 198 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + IS+ GH D++ N +LS RA + + L K +RI + F Sbjct: 120 IVDPNRKISVEGHADST---GSDTYNKQLSARRANTVARFLKKDLGLGNRIVE-KAFGET 175 Query: 319 RLK--IASDPMNSANRRIDILVE 339 + N NRR+ + +E Sbjct: 176 TPICAAEENQQNGCNRRVVLTLE 198 >gi|58698495|ref|ZP_00373400.1| peptidoglycan-associated lipoprotein [Wolbachia endosymbiont of Drosophila ananassae] gi|225630914|ref|YP_002727705.1| peptidoglycan-associated lipoprotein, putative [Wolbachia sp. wRi] gi|58534989|gb|EAL59083.1| peptidoglycan-associated lipoprotein [Wolbachia endosymbiont of Drosophila ananassae] gi|225592895|gb|ACN95914.1| peptidoglycan-associated lipoprotein, putative [Wolbachia sp. wRi] Length = 159 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 15/116 (12%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F S + L + EVL + + +++ GHTD N L Sbjct: 41 NKRVFFGYDESSIAEVSADALLDVMEVLQDNPDAKVTLTGHTDNR---GSHEYNLALGAR 97 Query: 291 RAYSAYQVLMK-SGVSEDRISKISGFAHHRLK--IASDP-------MNSANRRIDI 336 RA +A + ++ + E+RI S + D ++ NRR++ Sbjct: 98 RADAAKKFMVSCTPYIENRIKTAS-KGETEPLVNVKDDSRNSKYEKEHAKNRRVEF 152 >gi|253997443|ref|YP_003049507.1| peptidoglycan-associated lipoprotein [Methylotenera mobilis JLW8] gi|253984122|gb|ACT48980.1| peptidoglycan-associated lipoprotein [Methylotenera mobilis JLW8] Length = 191 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 7/114 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 + FD S E +++ + L ++ + +G+TD N L Sbjct: 82 SKRNIYFDFDSDSVKAEYRPIVEAHAKYLLANSNAKVVLQGNTDER---GTREYNVSLGQ 138 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341 RA S + GV + +I +S + A + + NRR++++ E+ Sbjct: 139 RRAVSVKKSFNLLGVQDKQIETVS-LGEEKASANCADEACHQQNRRVEVVYEND 191 >gi|300776671|ref|ZP_07086529.1| OmpA family protein [Chryseobacterium gleum ATCC 35910] gi|300502181|gb|EFK33321.1| OmpA family protein [Chryseobacterium gleum ATCC 35910] Length = 886 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 15/116 (12%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + T + S++ + VL + + L + +++ G+ N LS Sbjct: 318 QRTIYYKFDSTVIDKDGEAVLNNVLKFLLEHKDSTMNLSGYAC---VIGKENYNKGLSQK 374 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA----------SDPMNSANRRIDI 336 RA + G+ RI + G ++ NRR+DI Sbjct: 375 RADVVKKFFADGGLDPRRIISV-GKGEVDPTDDKMGRDNIKYKNEKDYENNRRVDI 429 >gi|17230523|ref|NP_487071.1| hypothetical protein all3031 [Nostoc sp. PCC 7120] gi|17132125|dbj|BAB74730.1| all3031 [Nostoc sp. PCC 7120] Length = 599 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 18/145 (12%) Query: 210 NIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-------- 260 L E+ + I +R F + S +P + L + + Sbjct: 454 QFQDQDLVESELNELAIYQSQIEREIIFFPEGSQEIIPSELSKLNNLVLAIKKLLPIAKY 513 Query: 261 -HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 I I GHT+ + N +LS R+ L G+S ++ ++ G + + Sbjct: 514 LEKDVHIQIIGHTNTT---GTESRNAQLSAGRSQRVLSYLSSQGISTSQL-QVLGVSSSQ 569 Query: 320 LKIASDPMNSA--NRRID--ILVED 340 NRR+ +++ Sbjct: 570 PLQPELTDEGKKFNRRVSFKVIIMR 594 >gi|323528823|ref|YP_004230975.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001] gi|323385825|gb|ADX57915.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001] Length = 242 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 41/124 (33%), Gaps = 17/124 (13%) Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWR 286 + +F S P P L +I + V ++ GHTD N Sbjct: 123 ESDALFPFGKSSPESMLPAAKARLDEIAARIRQHEHVSAVTVVGHTDRL---GPESINGP 179 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILV 338 LSL RA + L+ G+ I G + ++ +R + I V Sbjct: 180 LSLARANTVRDYLVAHGLDGS-IIHAKGVGSSEPRTHCAEGDARALIACLQQDRYVSITV 238 Query: 339 EDRQ 342 E R+ Sbjct: 239 EGRK 242 >gi|194295640|gb|ACF40847.1| outer membrane protein [Riemerella anatipestifer] Length = 270 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 29/248 (11%), Positives = 62/248 (25%), Gaps = 21/248 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 N AS + ++ +D + + ++N Sbjct: 42 LANFWQASASLNFRFGNRDKDKDGVLDKDDLCPEIPGLPEFQGCPDTDGDGVPDKDDNCP 101 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ ++ C T D+ + Sbjct: 102 EVAGPVENNGCPWPDTDKDGVLDKDDACVDVAGPAENNGCPWPD---------------- 145 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D + + + + + F+ + + PE+ L Sbjct: 146 TDNDGVLDKDDKCPNVPGLPEYKGCPKPQEAYAVEATGALKGIFFNFNKASIRPESNTKL 205 Query: 253 QKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 + EV+ + + GH D + A N +LS +RA S L GV+ ++ Sbjct: 206 DQAAEVIKSSNGGTFLVVGHAD---VKGNANYNLKLSRERAASVVVALEARGVNPSQLKS 262 Query: 312 ISGFAHHR 319 G Sbjct: 263 -KGVGSAE 269 >gi|90413203|ref|ZP_01221198.1| hypothetical protein P3TCK_16554 [Photobacterium profundum 3TCK] gi|90325755|gb|EAS42213.1| hypothetical protein P3TCK_16554 [Photobacterium profundum 3TCK] Length = 168 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 5/99 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD SI PE I L + + I I GHTD ++ N +LS R+ Sbjct: 65 FDFDKSILKPEDIAELDDFIAKVINLKGHIVIAGHTD---YQGSDDYNEKLSFRRSTVIQ 121 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333 Q L E+ +++ F + + + N+ NRR Sbjct: 122 QYLSARISVENYTFEVAYFGENNPIVKAHSLKANALNRR 160 >gi|254564113|ref|YP_003071208.1| hypothetical protein METDI5803 [Methylobacterium extorquens DM4] gi|254271391|emb|CAX27404.1| Conserved hypothetical protein; putative OmpA family member [Methylobacterium extorquens DM4] Length = 717 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 66/211 (31%), Gaps = 11/211 (5%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + + + + P + + + ++ Sbjct: 491 VDDDGRLLRRSRRYRDGREVVIINNAYGGAPRPIYEDVVELPPPDIRIPRDRYVVDYEQA 550 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVV 251 + A + + + + + + + NT FD S P+ Sbjct: 551 DERAVYEALSAPPVQKLDRRYTLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKR 610 Query: 252 LQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 L I E + + EV I G+TDA DN LS RA S VL ++ V Sbjct: 611 LSTIAEAINRTIKDNPQEVFLIEGYTDAV---GSDIDNLSLSDRRAQSVASVLTQNFQVP 667 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + ++ G+ LK+ + N NRR+ + Sbjct: 668 PENLTT-QGYGEQYLKVNTQEANRENRRVTV 697 >gi|728644|emb|CAA59448.1| MotB [Rhodobacter sphaeroides] Length = 332 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 2/154 (1%) Query: 26 TPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFD 85 P +W +AD T LMAFF+++ D+ + + + Sbjct: 27 PPPGAPAWLATFADIATNLMAFFVLILGFAKFDEPSFSKMAGAMRETFGFHSIRDATSGN 86 Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 + + DE ++ + G ++ + L+ + +S+ + Sbjct: 87 TMIDFGLPTADPDGAQPDEKS--DTGGSEDGGDAAERVAEALKKALEDGKLQVRSDEGEV 144 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 + E G+ +S + P + Sbjct: 145 VIELSGEDGRQQAQSLARALAETAGLGPLPEPQT 178 >gi|254367946|ref|ZP_04983966.1| outer membrane associated protein [Francisella tularensis subsp. holarctica 257] gi|134253756|gb|EBA52850.1| outer membrane associated protein [Francisella tularensis subsp. holarctica 257] Length = 393 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 20/198 (10%), Positives = 55/198 (27%), Gaps = 9/198 (4%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + D + + + + + L I Sbjct: 192 GANGRAGTNMIGAGLTWFFGGKDTTNNDTGNIQDNGATTAAQTVAMPTIDESKYVLPAGI 251 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + GV T + +D + F + + + + Sbjct: 252 KQ--CEGNFNLTEDGVACYTVNGDEVTVYLDTK----FAYDKATLNAKGKKAIASFVNFI 305 Query: 260 AH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + ++++G+ + N +LS RA + + + G+ ++I GF + Sbjct: 306 KDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQAVADYMKQLGLDSEKIIT-KGFGY 364 Query: 318 HRLKIASDPMNSANRRID 335 + + N+R++ Sbjct: 365 NDTLGGIHKSDPRNQRVE 382 >gi|54308335|ref|YP_129355.1| hypothetical protein PBPRA1142 [Photobacterium profundum SS9] gi|46912763|emb|CAG19553.1| hypothetical protein PBPRA1142 [Photobacterium profundum SS9] Length = 168 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 5/99 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD SI PE I L + + I I GHTD ++ N +LS R+ Sbjct: 65 FDFDKSILKPEDIAELDDFIAKVINLKGHIVIAGHTD---YQGSDDYNEKLSFRRSTVIQ 121 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRR 333 Q L E+ +++ F + + + N+ NRR Sbjct: 122 QYLAARIPVENYTFEVAYFGENNPIVKAHSLKANALNRR 160 >gi|144897493|emb|CAM74357.1| Outer membrane protein and related peptidoglycan-associated (lipo) [Magnetospirillum gryphiswaldense MSR-1] Length = 280 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 75/232 (32%), Gaps = 18/232 (7%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 ++ + ++ + +N + + + L D++ S +K + + Sbjct: 54 EKGESDWYDVDFFTNKARQAASGIAPAPQHPTDRGLAGRADVKASHDKLVAALAVTGATK 113 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID----------Q 231 + + G AD+I + + + + Sbjct: 114 DAPDACALAQTWH-DHWLEQLEEGFQADDIAEAKNGYDKAIPLCVPKPVVAAPASPKIIK 172 Query: 232 RNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + FD S +L + + A + + GHTD A+ N LS+ Sbjct: 173 QFVVYFDLGKSAITAAAKKILVDVVKDEAALKPTSVYLAGHTDTV---GNAKANEALSIK 229 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVED 340 R + + L K GV ++ + +L + + + NRR++I+ E Sbjct: 230 RTETVAKELAKMGV-ATKVLDMKSHGEAKLAVPTKDNVAEGKNRRVEIMFEK 280 >gi|325955198|ref|YP_004238858.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] gi|323437816|gb|ADX68280.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] Length = 753 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 11/114 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ SI L K+ +L + I GHTDA N LS RA++ Sbjct: 643 FNFDQSIIRDHDFSFLDKLALLLVDNPTVNFIIEGHTDA---AGTESYNLTLSEKRAFAV 699 Query: 296 YQVLMKSGVSEDRI------SKISGFAHHRLKIASDP-MNSANRRIDILVEDRQ 342 Q L GV R+ + + + + N NRR+ I + + Sbjct: 700 AQYLEGKGVDFSRMHILGIGTSAMKYPECKPVEMCEEWKNFENRRVVIKMNSSE 753 >gi|304413884|ref|ZP_07395301.1| peptidoglycan-associated lipoprotein [Candidatus Regiella insecticola LSR1] gi|304283604|gb|EFL91999.1| peptidoglycan-associated lipoprotein [Candidatus Regiella insecticola LSR1] Length = 170 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 7/116 (6%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARD 283 + + ++N F E+ +L + L I I G+ D Sbjct: 58 QMQRLQRQNIIYFGYDKYDISAESTSILNEHAAFLRADPAIKIVIEGYADER---GTPEY 114 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 N L RA + L GVS +IS +S + + N + NRR ++ Sbjct: 115 NIALGERRANAVSMYLRGQGVSNQQISIVS-YGKLKPVDLGHDENAYAKNRRAVLV 169 >gi|262164958|ref|ZP_06032696.1| outer membrane protein [Vibrio mimicus VM223] gi|262027338|gb|EEY46005.1| outer membrane protein [Vibrio mimicus VM223] Length = 81 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + S I + GH D + + N LS RA + + L + +RI + GF Sbjct: 1 MVDSQYKIVVEGHADQT---GNPKYNQALSERRAGAVTRYLRDTLKLGNRIVE-KGFGES 56 Query: 319 RLK--IASDPMNSANRRIDILVE 339 + + NRR+ + ++ Sbjct: 57 APVCTVQENAQTGCNRRVVLKIQ 79 >gi|212635870|ref|YP_002312395.1| OmpA protein [Shewanella piezotolerans WP3] gi|212557354|gb|ACJ29808.1| OmpA [Shewanella piezotolerans WP3] Length = 249 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 53/179 (29%), Gaps = 24/179 (13%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 K + L E + + L L+ + L + + + G+ + Sbjct: 77 KTQQVMLESKQSELAALNEENQSLIALSSQYEDAQQQLTSLKMAQEQKLTELALGLNVQ- 135 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287 F SS P L + ++ S E + + G+ D N L Sbjct: 136 --------FKTGSSTIEPHFQQQLDDVAYAMSLSPELTLDLTGYADRR---GDGDYNQAL 184 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--AN----RRIDILVED 340 S R L+ GV+ +R++ + N RR+ + ++ Sbjct: 185 SEQRVAEVTNYLVAQGVANERLN-YQAYGASSPL----TAEQNFENDFFDRRVTLKLQS 238 >gi|325578440|ref|ZP_08148575.1| lipoprotein PlpD [Haemophilus parainfluenzae ATCC 33392] gi|325160176|gb|EGC72305.1| lipoprotein PlpD [Haemophilus parainfluenzae ATCC 33392] Length = 285 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 18/116 (15%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD V+ + L + + + + G+TD N LS R Sbjct: 148 GDFLFDFDKDTLTARGKEVVDSVAAQLKETGAKDVKVAGYTDRL---GSDAYNLDLSQRR 204 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS------DPMNSA-----NRRIDI 336 A L++ GV+ + G+ ++ + NRR++I Sbjct: 205 ANRVKARLLQDGVTSE--ITAIGYGK-NPQVKACDGYKHGSKAEKDCLRPNRRVEI 257 >gi|307302740|ref|ZP_07582496.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C] gi|306903104|gb|EFN33695.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C] Length = 633 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 66/197 (33%), Gaps = 13/197 (6%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 E + ++ + Y LPP+ + +D + LS Sbjct: 428 GGEEYVMMYAPEYEEDRPTIVDVGYDLPPMRLSIPVDEYIVDVAEDPDRDYYEFLSEPPV 487 Query: 209 DNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----A 260 + + + + R + +T F S+ ++ + E + Sbjct: 488 EPVERVYTIDEVRHSARLRDKVRRIDLDTITFATGSAEVSMSQAKTMRNVAEAMNKVLEK 547 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 E I GHTDA + N LS +RA S +L + G+ + + G+ Sbjct: 548 DPGETFFIEGHTDAV---GADQSNLVLSDERAESVAVLLTEVYGIPAENLVT-QGYGERF 603 Query: 320 LKIASDPMNSANRRIDI 336 LKI +D NRR+ I Sbjct: 604 LKIRTDGPEQENRRVTI 620 >gi|320008837|gb|ADW03687.1| OmpA/MotB domain protein [Streptomyces flavogriseus ATCC 33331] Length = 216 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 16/112 (14%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + +F K S+ E + I + + + G TD + LS Sbjct: 106 QAEVLFGKDSAKLSGEATARINAIALEIQTQKAPKVRVFGFTDNL---GSSAHGDVLSKQ 162 Query: 291 RAYSAYQVLMKSGVSEDRISKIS----GFAHHRLKIASDPMNSA--NRRIDI 336 RA + GV ++ ++ G+ ++D + NRR+++ Sbjct: 163 RANAV------QGVLATKLPSVTFEIRGYGEQYPIASNDTEDGRKKNRRVEV 208 >gi|114706993|ref|ZP_01439892.1| hypothetical protein FP2506_03039 [Fulvimarina pelagi HTCC2506] gi|114537543|gb|EAU40668.1| hypothetical protein FP2506_03039 [Fulvimarina pelagi HTCC2506] Length = 710 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 77/256 (30%), Gaps = 13/256 (5%) Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 +++ + + + ++ T ++ ++ + Q Sbjct: 443 IRSDDTSRVAVDAQDQYYERLGGGRVRETIVRENGVQVVTITNRYGETIQRSRILPDGRE 502 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 +S E + LPP+ + + T+ + Sbjct: 503 VVLFYDPYAESDTAEPQFYYDPGAELPPIQYAIPESDYIVDVAEPDQALYYRTIVAPPVE 562 Query: 210 NIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV- 265 + + + R I NT F S+ E + L+ + + ++ + Sbjct: 563 TVERIYSVDEVRRSKRIRDKVRRIDLNTINFGFGSAEISQEQVSNLEALAQAISEVIDQN 622 Query: 266 ----ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRL 320 I GHTDA N +LS RA + L V + + G+ L Sbjct: 623 PDETFIIEGHTDAV---GTDLANLKLSDQRAETVAAALTNFFDVPPENLIT-QGYGEQFL 678 Query: 321 KIASDPMNSANRRIDI 336 K+ + N+ NRR+ + Sbjct: 679 KVDTQDQNAENRRVTV 694 >gi|126736583|ref|ZP_01752323.1| OmpA/MotB [Roseobacter sp. CCS2] gi|126713896|gb|EBA10767.1| OmpA/MotB [Roseobacter sp. CCS2] Length = 513 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 54/176 (30%), Gaps = 11/176 (6%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + L E + + ++ + + + + + + IS Sbjct: 337 SEEAQGLISEAGFIDQTIREASVDSQGLRVASAVVANRDFSTFPQLQQMMEQL-ISSDRL 395 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLS 288 T F+ SS + ++ +L+ G TD+ N +LS Sbjct: 396 STTFRFETGSSNLDARAQDDIVRLARLLSSDAYRNKEAVFVGFTDSV---GDPELNRQLS 452 Query: 289 LDRAYSAYQVLMKSG--VSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVED 340 RA Q L+ + + + G+ ++ NRR+++ V D Sbjct: 453 ERRAGQVVQELLDENPDLQSNVALQTIGYGEISPLGCNETNTGRRINRRVEVWVRD 508 >gi|257057431|ref|YP_003135263.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Saccharomonospora viridis DSM 43017] gi|256587303|gb|ACU98436.1| outer membrane protein/peptidoglycan-associated (lipo)protein [Saccharomonospora viridis DSM 43017] Length = 223 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 5/105 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F S+ ++ + ++L A + I GH P +LS +RA + Sbjct: 122 FAADSANLDAAGRQAVKNVADLLTEAPTDWRFEIAGHVARVPGAEPE-SARKLSYERAEA 180 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 + L+KSG+S DR+ + G+ R S S +RR++I V Sbjct: 181 VAEELVKSGLSPDRVEPV-GYGATRPLSDSGTS-SIDRRVEITVR 223 >gi|153875680|ref|ZP_02003374.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152067857|gb|EDN66627.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 238 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 60/189 (31%), Gaps = 12/189 (6%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 ++ S + + + L KE+ A+ + D + S Sbjct: 54 EAHSQNCSRDADSKARVKELLKEQPYAVAEADEVIDRESLLVLYDSKRRIKVNQN---LS 110 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277 R + F+ + I L+++ I I HT+ F Sbjct: 111 NCRLYTRVKPKITFRNLSFNSGKASLKRGAIYQLKEMAAAFKTIAPLKIKIHSHTNIQTF 170 Query: 278 RN-----IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SA 330 + ++ N LS +RA + L + G+ D I G + + + Sbjct: 171 KGIEQEESSKRNQILSEERADTIADTLARLGIDRDYIKTF-GHGYSQPLTYELTKAALAK 229 Query: 331 NRRIDILVE 339 N+RI+I VE Sbjct: 230 NKRIEIKVE 238 >gi|124006521|ref|ZP_01691354.1| fibronectin-binding protein, putative [Microscilla marina ATCC 23134] gi|123987934|gb|EAY27614.1| fibronectin-binding protein, putative [Microscilla marina ATCC 23134] Length = 130 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 7/104 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S + + K+ + + S ISI HTD N LS R+ + Sbjct: 25 FGGGSYYIDAKQKRNIVKVIKQIKDLSKYQISITSHTDNI---GGKEYNEWLSKMRSNAV 81 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 + L++ + + ++ I F +D NRR+D+L Sbjct: 82 LKQLIEHQIKKGKVL-IKDFGQDNPMYTNDSHNGRIRNRRVDLL 124 >gi|54309975|ref|YP_130995.1| hypothetical protein PBPRA2821 [Photobacterium profundum SS9] gi|46914414|emb|CAG21193.1| hypothetical protein PBPRA2821 [Photobacterium profundum SS9] Length = 319 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 42/104 (40%), Gaps = 5/104 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + L ++ + L + E I G TD++ A N ++S RA + Sbjct: 220 YQTGQVDVNDYGRYNLNEVAQTLQANPELTAEIIGRTDST---GTAAINAKVSEARANAV 276 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 Q L+ +GV R+ ++ A + + R ++++++ Sbjct: 277 SQYLIDNGVDASRL-TVTSVADQNPLTDDNGKSLIERSVEVVIK 319 >gi|87307403|ref|ZP_01089548.1| probable MotB-like protein [Blastopirellula marina DSM 3645] gi|87290143|gb|EAQ82032.1| probable MotB-like protein [Blastopirellula marina DSM 3645] Length = 257 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 19/163 (11%), Positives = 48/163 (29%), Gaps = 1/163 (0%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDT-KKAIEQYFNPFGKNLMTASK 81 DD + W + + D M++L+ FF+++ ++ + +A+ + F + + + Sbjct: 3 DDDDAVGIPEWVVTFGDMMSLLLTFFIMLVSMSEIKKEEHFQALVESFRRQFGHDDSMNS 62 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 + P N + + + K+ + R+ + Sbjct: 63 VVAGTAQPRNSHLSNLATMGRAKRFSTQEGGDKVKAPVGDSPQVRIIRPGSSTAVGTVIY 122 Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 S E +DL ++ K Sbjct: 123 FPGESAKLTDEMKRDLQVQAQEFGGKPQKIEIRGHAAPKPLAP 165 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 8/163 (4%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP---MFDKSS 241 A R L +LA + + +I F S Sbjct: 68 AQPRNSHLSNLATMGRAKRFSTQEGGDKVKAPVGDSPQVRIIRPGSSTAVGTVIYFPGES 127 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASP--FRNIARDNWRLSLDRAYSAYQVL 299 + E LQ + + I IRGH P D++ L +R + L Sbjct: 128 AKLTDEMKRDLQVQAQEFGGKPQKIEIRGHAAPKPLAPGAPFVDHYDLGYERCRAVMNFL 187 Query: 300 MKSGVSEDRISKISGFAHHRLK-IASDPMNSA-NRRIDILVED 340 + G+ RI +IS + I +DP+ S N R+++ + D Sbjct: 188 VSLGIDPRRI-RISTAGKNEPIHIGTDPLKSKQNPRVEVFLLD 229 >gi|148974875|ref|ZP_01811855.1| outer membrane protein [Vibrionales bacterium SWAT-3] gi|145965384|gb|EDK30633.1| outer membrane protein [Vibrionales bacterium SWAT-3] Length = 180 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 6/97 (6%) Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 E+ + + L I I GH D+ N LS RA L + Sbjct: 88 DESHKQVLEQYLSLVDDKSKIFIEGHADSL---GSESYNKALSSRRAGQVTSYLKEDLRQ 144 Query: 306 EDRISKISGFAHHRLK--IASDPMNSANRRIDILVED 340 RI + + + A + + NRR+ I V+ Sbjct: 145 GSRIVEYA-YGESAPICKAADNKVTGCNRRVVITVKS 180 >gi|332534875|ref|ZP_08410697.1| outer membrane protein [Pseudoalteromonas haloplanktis ANT/505] gi|332035674|gb|EGI72163.1| outer membrane protein [Pseudoalteromonas haloplanktis ANT/505] Length = 243 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 10/165 (6%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-RNTPM 236 + + +++ L+ VL + I + T Sbjct: 70 ADNKIAEQERAITVMKEKTSDYQHVLNHNNMLEQQLEVLANQNEQLTQVQINNLLAMTVQ 129 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS+ P + L ++ +L + + + + G D + N LS R + Sbjct: 130 FKTGSSVIAPHFALQLDQLVTLLNNQPQLALDLSGFADQR---GDEQANLLLSKARVNAV 186 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDIL 337 L+K GVS R+S F + S+ + N RR+ + Sbjct: 187 QSYLIKHGVSHKRLST-QAFGEQQTLANSNTVED-NFFDRRVTLT 229 >gi|170693151|ref|ZP_02884312.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] gi|170142149|gb|EDT10316.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] Length = 242 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 17/124 (13%) Query: 232 RNTPMFDKSS---SIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWR 286 + +F LP L + + +V +I GHTD N Sbjct: 123 ESDALFPFGKSAADTMLPSAKAQLDDVAARIRKHEQVSAIEVVGHTDRL---GPESLNGP 179 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILV 338 LSL RA + L+ G+ I + G + + +R + I V Sbjct: 180 LSLARANTVRDYLIAHGLDGS-IIQAKGVGASQPRTNCADREGRALIACLQPDRYVSITV 238 Query: 339 EDRQ 342 + R+ Sbjct: 239 QGRK 242 >gi|310814990|ref|YP_003962954.1| OmpA domain protein [Ketogulonicigenium vulgare Y25] gi|308753725|gb|ADO41654.1| OmpA domain protein [Ketogulonicigenium vulgare Y25] Length = 299 Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 77/258 (29%), Gaps = 14/258 (5%) Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 G F + P R+ + N L + + + +F + S Sbjct: 45 TGPFADGALPTRTIDGAVQRRAWRIADPNPNTLPLMQQIRANLQAEGYDILFDCAASACG 104 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + D + + L L + + A+ +L + + Sbjct: 105 GFDFRAGAEVIAAPAMFVDLGDFRFLAAQRDGAALSVLISKSVAAL--HVQLIEATAGAA 162 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 +A+ + + +I + F+ S+ PLP V L + + L Sbjct: 163 PMPIAPIAEALPSWAMTLEVEGHAVI------DGLAFETGSAAPLPGADVALGALADWLR 216 Query: 261 -HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + I GHTDA N +S RA + Q L + +G + Sbjct: 217 ADPARRVLIVGHTDA---SGSLAANMTISQARAEAVAQRLRSEFAVPAAQLQAAGAGYMA 273 Query: 320 LKIASDPMNSA--NRRID 335 + +D NRR++ Sbjct: 274 PRAPNDDEAGRALNRRVE 291 >gi|313500679|gb|ADR62045.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1] Length = 217 Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 10/180 (5%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 + + + + ++ ++ + ++ + A+ + +L Sbjct: 32 ELVESPAAPVPYVAPSAQGQNTAQMQQTINALNIEIQSLRVRLAAAEADANGSRQELLAI 91 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 R I T F S P + A + I G TD+ Sbjct: 92 RARQD-QIQTSINHMTLNFAFGHSRFSPSAEDGDVLVRS--AQDALQVKIVGFTDSV--- 145 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDI 336 N R++L RA +A L++ GV +IS + A+D +ANRR++ Sbjct: 146 GTVEANRRVALLRAQAAKMYLVRRGVPAAKISAEGQEGDY--IAANDTPAGRAANRRVEF 203 >gi|325107643|ref|YP_004268711.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305] gi|324967911|gb|ADY58689.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305] Length = 241 Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 28/225 (12%), Positives = 64/225 (28%), Gaps = 6/225 (2%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 DD P + W + Y D M++L+ FF+++ ++ + K + + Sbjct: 2 DDDGPPGVPEWVVTYGDMMSLLLTFFIMLVSLSEVKAEKK------YRAIIEAARQYMGY 55 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 + PP +S + + SV KQ +++ + + Sbjct: 56 SGAPKAPPGKSFPLNSIVDSLHEMKLGSVSDDDKGRGGIKQKAPPGDDLKVVRLREGESQ 115 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 L + + E P + + + + +Q Sbjct: 116 IAGRPIVFEPGSTTLSEVDLEQIDTISREVAGKPHKLEIRAFSSPLVQGMQQTPDNRMQL 175 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + + + + + + I+I D S IP Sbjct: 176 SYNRAHEVMDRMLENRVQKDRMRIAIYFHNPNEALDAQSPIPKDR 220 >gi|294676839|ref|YP_003577454.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB 1003] gi|294475659|gb|ADE85047.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003] Length = 334 Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 49/245 (20%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q+ + + + R L + K ++ + L ++ A+++ K+ L Sbjct: 59 QERDSARQDVERLLLSIARLQAQIEDLKQTVATKDARIAELERQLAEALEKLKQRDPLEA 118 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQ---------RNTPMFDKSSSIPLPET 248 + + + I +D + + +F + Sbjct: 119 YSARSTKARHEMIERLASAVKEDIAREKIEGLDVSAQGDALRFQGSGLFASGQGGLSGNS 178 Query: 249 IVVLQKIGEVLAHSTEVI----------------------SIRGHTDASPFRNIARDNWR 286 + +++ +G L + GHTDA N Sbjct: 179 LRIIRLLGAHLEGQLPCFTVGPRGAIAASCNPDLVLIETVQVEGHTDAD---ASQASNLT 235 Query: 287 LSLDRAYSAYQ-------------VLMKSGVSEDRISKISGFAHHRLKIASDPMN--SAN 331 LS+ RA SA+ +L + + ++G+ R +D +AN Sbjct: 236 LSMLRATSAFNAIAPDAAQDDAPPMLAFQNLLGQPVLAVAGYGEMRPIGPNDSPEGKAAN 295 Query: 332 RRIDI 336 RRID+ Sbjct: 296 RRIDL 300 >gi|221640665|ref|YP_002526927.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131] gi|221161446|gb|ACM02426.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131] Length = 485 Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 27/240 (11%), Positives = 68/240 (28%), Gaps = 16/240 (6%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 ++ + + + + S ++ + + Sbjct: 249 TGQTARGAARVLPLTDSCGFPLVPSPLAVKSEDYPLALPVFLVSPPRRLPLFAREFLEFL 308 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 S + + + Q L I + D + + + Sbjct: 309 SSAPAQAAVAEAGFVDRRPSRVPLASDGQRLMNAIRIAGDEVPLDEVKRLTDLMAGADRL 368 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIA 281 I+ F++ + P++ L ++ ++L + + + G +D A Sbjct: 369 SITFR-------FEEGTDSLEPQSRESLSELIKLLEIGRFRGQQLMLIGFSDGR---GPA 418 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 R N LS +RA + L ++ V + GF + NRR+++ + Sbjct: 419 RANLDLSRERAETVAAALREA-VPVLGPPLVEGFGEALPLACDTTVAGRRMNRRVELWLR 477 >gi|328947792|ref|YP_004365129.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489] gi|328448116|gb|AEB13832.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489] Length = 1053 Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 12/100 (12%) Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARD---NW-----RLSLDRAYSAYQVLMKS 302 L+++ E+L + +I GH + + W LS RA L+K Sbjct: 955 LKRVSEILKKFKDYKVTIVGHANRISDNSAEETEEGVWGKALISLSEQRAEYVKSQLVKF 1014 Query: 303 GVSEDRISKISGFAHHRLKIA-SDPM-NSANRRIDILVED 340 G++ R+ + G D N NRR++ ++E Sbjct: 1015 GINSSRL-SVEGKGGTEPVADRKDTNVNWKNRRVEFILEK 1053 >gi|16125000|ref|NP_419564.1| OmpA family protein [Caulobacter crescentus CB15] gi|221233721|ref|YP_002516157.1| heat resistant agglutinin [Caulobacter crescentus NA1000] gi|13421980|gb|AAK22732.1| OmpA family protein [Caulobacter crescentus CB15] gi|220962893|gb|ACL94249.1| heat resistant agglutinin [Caulobacter crescentus NA1000] Length = 407 Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 7/111 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289 + F + PE V+Q+ + + + + GHTD N +LS Sbjct: 298 REFVVYFPFDQYVLTPEAQAVVQQAADYAKGGNATRVVVTGHTDT---SGSDAYNRKLSE 354 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 R + L+ G++ + + + NRR + + Sbjct: 355 RRGRAVADGLVGMGLNAA-TVAVDWKGEKAPAVETGDGVKEPLNRRSSVSI 404 >gi|300024245|ref|YP_003756856.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526066|gb|ADJ24535.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 602 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 10/110 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNW 285 + F+ S P L+++ + EV I G+TDA DN Sbjct: 449 DLDDINFEFGSWEVDPGEYRKLERVARAMKRVISRNPNEVFMIEGYTDAV---GSQEDNL 505 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 LS RA S +VL + V + + G+ LK+ + NRR+ Sbjct: 506 SLSDRRAESVAEVLTEEFQVPFENLVT-QGYGEDYLKVPTQAAERLNRRV 554 >gi|261415252|ref|YP_003248935.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371708|gb|ACX74453.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325746|gb|ADL24947.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 654 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S E+ L ++ L + I HTD +R L+L RA Sbjct: 483 FGVGQSKFTRESSDGLNRLAAHLRNYNGKTIEIVSHTDNLDRPERSR---VLALKRAEEV 539 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 L+ +G+S I +G + + N RI++ V Sbjct: 540 KSYLVMAGLSGQDIIA-TGKGGDEPLVPNTTPDNRMKNNRIEVFV 583 >gi|224456780|ref|ZP_03665253.1| outer membrane associated protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254874523|ref|ZP_05247233.1| fopA, outer membrane associated protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254840522|gb|EET18958.1| fopA, outer membrane associated protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282158878|gb|ADA78269.1| outer membrane associated protein [Francisella tularensis subsp. tularensis NE061598] Length = 392 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + + + + + ++++G+ + N +LS RA + Sbjct: 282 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 341 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + G+ ++I GF ++ + N+R++ Sbjct: 342 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 381 >gi|254255076|ref|ZP_04948393.1| Flagellar motor protein [Burkholderia dolosa AUO158] gi|124899721|gb|EAY71564.1| Flagellar motor protein [Burkholderia dolosa AUO158] Length = 352 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 3/171 (1%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 L+ + E + + D + + P + + Sbjct: 108 VLAARDEEETRIKLIEMSEQAMYDGGAGMFDGTGSAPSLDEPIGPRAIDPSTGAVTWDAD 167 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 LA+ + + + T G+ + + D + +F++ S++P P +L Sbjct: 168 DGLAQLAARFDRLGADAGLQDNLRSVMTPFGLRLMLHDSESQGVFERGSAVPAPPFRPLL 227 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRN---IARDNWRLSLDRAYSAYQVLM 300 K+G + A + + + GHTD+ P+R R NW LS DRA SA + L+ Sbjct: 228 DKMGALFAQTDSPLLVIGHTDSVPYRKYGLGGRSNWHLSADRAMSARRALV 278 Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 2/133 (1%) Query: 4 HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63 + + D I+K+ ++ G+WK+ +ADF LM FL++W++ A D++ + Sbjct: 59 GAKRGRHADGDTIVKRAPRRAHDHDHGGNWKVAFADFCLALMCLFLLLWVLAARDEEETR 118 Query: 64 AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 + + + G+FD + +ID + D G + Sbjct: 119 --IKLIEMSEQAMYDGGAGMFDGTGSAPSLDEPIGPRAIDPSTGAVTWDADDGLAQLAAR 176 Query: 124 YQRLENNIFYLSN 136 + RL + N Sbjct: 177 FDRLGADAGLQDN 189 >gi|260555968|ref|ZP_05828188.1| small protein A [Acinetobacter baumannii ATCC 19606] gi|260410879|gb|EEX04177.1| small protein A [Acinetobacter baumannii ATCC 19606] Length = 259 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 16/121 (13%) Query: 228 IIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARD 283 I D + +F E + KI E + S I + G TD Sbjct: 141 IADCTASVLFAFDRFDASAIEEGTNSVVKIAEQIKKSPTTTPIIVSGFTDPL---GKFSY 197 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMN-----SANRRID 335 N LS RA + ++L++ GV RI +I + L ++ + NRR++ Sbjct: 198 NQELSSKRANTVAKLLVRQGVEPSRI-QIQANSQTDLYKQCSDNNSSQLIQCLAPNRRVN 256 Query: 336 I 336 I Sbjct: 257 I 257 >gi|270293956|ref|ZP_06200158.1| major outer membrane protein OmpA [Bacteroides sp. D20] gi|270275423|gb|EFA21283.1| major outer membrane protein OmpA [Bacteroides sp. D20] Length = 374 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 70/268 (26%), Gaps = 16/268 (5%) Query: 53 IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 + + + + + P + + + ++ E + + Sbjct: 107 LFAGVNPNRFFEVYGFLGPQISVAKSQNVDV-----TISADGTSQSMTPAGEAEMRARIG 161 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 G + + ++ S S R +E L K Sbjct: 162 ASAGLGLKFNINTKWAIDVEARGAIAPSIFGNISSHRKAEGTGMLTAGVSYIFGGKKFVK 221 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + + L + L+ + + + Sbjct: 222 ASNIDEDAINAEINRYRSELAQAQ----ADLANCKNALANAKPEVKEVTKEVEV---AGP 274 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 F S+ V +Q ++L + + + G+ D A N +LS R Sbjct: 275 RAIFFKIGSARLDDYGKVNIQLAAKILKANPDRKYKVAGYCD--KATGSASWNQKLSEKR 332 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHR 319 A Y L+ GVS+D++ + GF Sbjct: 333 AQVVYDALIAEGVSKDQLELV-GFGGTE 359 >gi|220935619|ref|YP_002514518.1| sodium-type flagellar protein MotY, putative [Thioalkalivibrio sp. HL-EbGR7] gi|219996929|gb|ACL73531.1| sodium-type flagellar protein MotY, putative [Thioalkalivibrio sp. HL-EbGR7] Length = 280 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + S L+++ A + + GH D R N LS RA + Sbjct: 178 FDTNLSRLDARAHETLREVLTAWRAQRHMRVIVAGHAD---VRGGDTINDPLSRRRAEAV 234 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILV 338 L G+ +RI ++ F + + NRR + + Sbjct: 235 RTFLDVYGIPRNRI-ELRSFGATWPLDPGEGEAAWALNRRATVWL 278 >gi|320531947|ref|ZP_08032850.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320135840|gb|EFW27885.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 227 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 46/186 (24%), Gaps = 14/186 (7%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + L + + + + T Sbjct: 44 PAEPHAVPPVVAPAKNATPDPTPTLKPQESSGSGESRQVQPLDRRVVPVSRSSSSDSAVT 103 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFR 278 + ++ FD SS VL I +++ GHTD+ Sbjct: 104 YSSDGQTTVASLSGDVTFDVDSSALTDRAKQVLDDIVKRWNGKPPATVTVVGHTDSV--- 160 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--------SDPMNSA 330 N LS RA + L V + SG + ++ +A Sbjct: 161 ADDAHNQTLSEQRAKAVADYLTSK-VPSLNVQS-SGKGESEPVASETNADGSVNEAGKAA 218 Query: 331 NRRIDI 336 NR +D+ Sbjct: 219 NRHVDV 224 >gi|295836759|ref|ZP_06823692.1| secreted protein [Streptomyces sp. SPB74] gi|295826190|gb|EFG64725.1| secreted protein [Streptomyces sp. SPB74] Length = 204 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 10/133 (7%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 V +++ E T T + I++ + +FDK P ++ I + Sbjct: 73 VVEDLGGEERREDTNTDVKIALQAE---VLFDKDKFALDPSGRSRIEAIADEAKKQRART 129 Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 + G TD LS RA + L + + ++ G++ + Sbjct: 130 VRVFGFTDNL---GSYAHGKTLSKRRADIVHDELAPH-LGPEVTFEVRGYSEDYPIADNT 185 Query: 326 PMNSA--NRRIDI 336 NRR++I Sbjct: 186 TEEGRRKNRRVEI 198 >gi|90418977|ref|ZP_01226888.1| peptidoglycan-associated lipoprotein [Aurantimonas manganoxydans SI85-9A1] gi|90337057|gb|EAS50762.1| peptidoglycan-associated lipoprotein [Aurantimonas manganoxydans SI85-9A1] Length = 177 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 39/114 (34%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + FD S+ + L + L ++ + GH D N L R Sbjct: 68 DRVFFDTDSTSLRADAQQTLTQQARWLNQYSQYSIVIEGHADER---GTREYNLALGARR 124 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A + L++ GV +R+ IS + R S NRR + V G Sbjct: 125 AAATRDYLVQQGVPANRMRTIS-YGKERPVAVCDDISCWSQNRRA-VTVLSGAG 176 >gi|302553861|ref|ZP_07306203.1| type VI secretion system OmpA/MotB [Streptomyces viridochromogenes DSM 40736] gi|302471479|gb|EFL34572.1| type VI secretion system OmpA/MotB [Streptomyces viridochromogenes DSM 40736] Length = 213 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 10/208 (4%) Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 N ++E ++ + + + + P +K DL Sbjct: 2 NDARTETPHLAIVIAAASLVLATNVFAAASAHAADGPSYPPGTQPNAAAPVKVDANDPDL 61 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIID----QRNTPMFDKSSSIPLPETIVV 251 +TL+ +I V E+ + D + +F K S+ + Sbjct: 62 KLVEGATLADAKVLDIKTVVEDESGDERREDTNSDVKFALQAEVLFGKDSAKLGAQAKAR 121 Query: 252 LQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + I E + + + I + G TD + LS RA + VL Sbjct: 122 IADIAEEIKAQNAKKIRVFGFTDNL---GSSAHGDALSRRRASAVQGVLEGELADSGITY 178 Query: 311 KISGFAHHRLKIASDPMNSA--NRRIDI 336 + G+ + NRR+++ Sbjct: 179 ETRGYGEQYPIADNSTEAGRKKNRRVEV 206 >gi|290953550|ref|ZP_06558171.1| outer membrane protein FopA [Francisella tularensis subsp. holarctica URFT1] gi|295313154|ref|ZP_06803836.1| outer membrane protein FopA [Francisella tularensis subsp. holarctica URFT1] Length = 392 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + + + + + ++++G+ + N +LS RA + Sbjct: 282 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 341 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + G+ ++I GF ++ + N+R++ Sbjct: 342 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 381 >gi|56707711|ref|YP_169607.1| outer membrane associated protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110670182|ref|YP_666739.1| outer membrane associated protein [Francisella tularensis subsp. tularensis FSC198] gi|254370217|ref|ZP_04986223.1| outer membrane associated protein [Francisella tularensis subsp. tularensis FSC033] gi|56604203|emb|CAG45216.1| outer membrane associated protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320515|emb|CAL08599.1| outer membrane associated protein [Francisella tularensis subsp. tularensis FSC198] gi|151568461|gb|EDN34115.1| outer membrane associated protein [Francisella tularensis subsp. tularensis FSC033] Length = 393 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + + + + + ++++G+ + N +LS RA + Sbjct: 283 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 342 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + G+ ++I GF ++ + N+R++ Sbjct: 343 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 382 >gi|229495588|ref|ZP_04389321.1| OmpA family protein [Porphyromonas endodontalis ATCC 35406] gi|229317571|gb|EEN83471.1| OmpA family protein [Porphyromonas endodontalis ATCC 35406] Length = 415 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 54/188 (28%), Gaps = 13/188 (6%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 K + +P A ++ + KK Sbjct: 235 EGGLKLTYAFGKQRKRTEALEPIEPGMPEGDAHYEHAARKVDNEPEATKKTEPLDQSTTT 294 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VIS 267 V + I T F +S+ E V +Q+ +L + + I Sbjct: 295 APPSPEVSIAPVESAAAIDFP----TVYFAFNSATISSEEEVKMQQTLRLLQENPKLNII 350 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 I G D A N R+S RA + L G+S RI + G + ++ Sbjct: 351 IIGWCDTV---GNAAVNLRMSQKRAEALKTWLTSRGISAARIKAV-GRG----RDFNEKE 402 Query: 328 NSANRRID 335 + RR + Sbjct: 403 AAKARRSE 410 >gi|160889622|ref|ZP_02070625.1| hypothetical protein BACUNI_02048 [Bacteroides uniformis ATCC 8492] gi|156860614|gb|EDO54045.1| hypothetical protein BACUNI_02048 [Bacteroides uniformis ATCC 8492] Length = 379 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 28/268 (10%), Positives = 72/268 (26%), Gaps = 16/268 (5%) Query: 53 IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 + + + + + P + + + + + Sbjct: 112 LFAGANPNRFFEVYGFLGPQISVA---------KSQNVDVTISADGTSQSMAPAGEAEMR 162 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 +IG++ + ++ + S + + S Sbjct: 163 ARIGASAGLGLKFNINTKWAIDVEARGAIAPSIFGNISSHRKAEGTGMLTAGVSYIFGGK 222 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 F+P ++ R + + + L+ + + + Sbjct: 223 KFIPVSKIDEDAVNAEINRYRSELAQAQADLANCKNALANAKPEVKEVTKEVEV---AGP 279 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 F S+ V ++ ++L + + + G+ D A N +LS R Sbjct: 280 RAIFFKIGSARLDDYGKVNIELAAKILKANPDKKYKVAGYAD--KATGSASWNQKLSEKR 337 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHR 319 A Y L+ GV +D++ + GF Sbjct: 338 AQVVYDALIAQGVDKDQLELV-GFGGTE 364 >gi|327402931|ref|YP_004343769.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327318439|gb|AEA42931.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 254 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 11/103 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F LP + + + E L T I++ GH N LS RA Sbjct: 153 FAYGLDAMLPSSYNDIHFLIETLQADKTLFITLAGHVCC----GTDSKN--LSGMRAERI 206 Query: 296 YQVLMKSG-VSEDRISKISGFAHHRLKIASDPM--NSANRRID 335 Q+L+ G +S RI+ I GF + + D ANRR++ Sbjct: 207 KQILIMEGSISSSRINAI-GFGNKKPLFEDDTEIHRQANRRVE 248 >gi|269122960|ref|YP_003305537.1| YadA domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268314286|gb|ACZ00660.1| YadA domain protein [Streptobacillus moniliformis DSM 12112] Length = 2078 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 9/184 (4%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + N N L ++ + + K+L++ ++ + + D I + Sbjct: 1899 REEVIIENNPSNDIRDRLIEQNEKLINQNKKLEEDNDRLRRE-NDRIGDEIKELRERIKA 1957 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFR 278 I ++ D + +L I L + + I G+TD Sbjct: 1958 IEKIKMNEDDLYTLDGYRLGIHELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNV--- 2014 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRID 335 + N L L RA + L + G+ I K+S ++ + + N NRR++ Sbjct: 2015 SGENLNLELGLKRANVVAKKLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVE 2074 Query: 336 ILVE 339 I + Sbjct: 2075 IELR 2078 >gi|149370443|ref|ZP_01890132.1| OmpA domain protein [unidentified eubacterium SCB49] gi|149355994|gb|EDM44551.1| OmpA domain protein [unidentified eubacterium SCB49] Length = 432 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 6/139 (4%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 L D+ T + I + F +SS P ++ + + L Sbjct: 297 EARYLNKDDYKPSPNTVTNGSVIKDLLEKGYVNVYFKTNSSTPEKYSLEAVNYLKTYLIQ 356 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + G+ D N +LS RA Y +L+ SG+ +R+S +G Sbjct: 357 NPSASAQLIGYADEI---GNEAYNAQLSEKRAKRVYDILVASGIDANRLSH-TGNGEDTS 412 Query: 321 KIASDPM-NSANRRIDILV 338 + RR+ + Sbjct: 413 VDKNSSEARQLVRRVTFKL 431 >gi|86141022|ref|ZP_01059581.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis MED217] gi|85832964|gb|EAQ51413.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis MED217] Length = 268 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 77/208 (37%), Gaps = 13/208 (6%) Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 D + + +K + S + +L +S++ ++L Sbjct: 56 EDQAAQLEKELAQATSERDDLQRKYATAQANLKNLQDSYDALEANSSKALAENSKQNREL 115 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL-------AKKISSTLSGLVADN 210 D +++ E L + ++ +R + L+ + + + +S + D Sbjct: 116 LAQLDEKQADLAAEQNRLEKMQRDLTERSRRVEELESMIAAKDAKMRALKDAISKALVDF 175 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IR 269 G+ E + +S+ N +F+ S + + ++G VLA + E+ I Sbjct: 176 EGNGLTVEQRDGKVYVSL---ENKLLFESGSWNVGAKGRQAVNQLGSVLAQNPEIAVLIE 232 Query: 270 GHTDASPFRNIA--RDNWRLSLDRAYSA 295 GHTD P+ +DNW LS RA + Sbjct: 233 GHTDDVPYGGNGPLKDNWDLSTKRATAI 260 >gi|169656658|ref|YP_001428834.2| OmpA (outer membrane protein A) family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|164551726|gb|ABU61878.2| OmpA (outer membrane protein A) family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 393 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + + + + + ++++G+ + N +LS RA + Sbjct: 283 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 342 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + G+ ++I GF ++ + N+R++ Sbjct: 343 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 382 >gi|57339654|gb|AAW49814.1| hypothetical protein FTT0583 [synthetic construct] Length = 428 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + + + + + ++++G+ + N +LS RA + Sbjct: 309 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 368 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + G+ ++I GF ++ + N+R++ Sbjct: 369 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 408 >gi|325277486|ref|ZP_08143089.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] gi|324097373|gb|EGB95616.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51] Length = 435 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 28/284 (9%), Positives = 71/284 (25%), Gaps = 14/284 (4%) Query: 60 DTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTN 119 + + G F+ + Q+ + + ST+ Sbjct: 160 QRWEELGISGGAIHLYARDDRSGTFETFKALVLAPQHAALSAQARRFESSDELAAGVSTD 219 Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 ++ I +E ++ N P + Sbjct: 220 RQAIGFSSLAAIHGAKVLAVAEGDAPAMLPARALVASEDYPLSRRLYFYLPANPKPPAKA 279 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + +S + L + F Sbjct: 280 LADFAQSPAGQAIVAQQGFVSQQIQALPV---PPQAGMPPRYRNLAKQAQRLSVNFRFQA 336 Query: 240 SSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 S+ + + ++++ + L + G D A LS RA + Sbjct: 337 GSANLDNKALRDVRRVADYLHQAGKLQGKTVLVGFGDPKLTPGRAAL---LSRLRAQAVR 393 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + L ++GV+ + +++G ++ N+R+++ V Sbjct: 394 RQLARNGVA---VLQVTGMGAELPVAGNEREQGRLHNQRVEVWV 434 >gi|54302438|ref|YP_132431.1| OmpA family protein [Photobacterium profundum SS9] gi|46915860|emb|CAG22631.1| hypothetical OmpA family protein [Photobacterium profundum SS9] Length = 252 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 28/254 (11%), Positives = 68/254 (26%), Gaps = 27/254 (10%) Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 L +T + + G + Sbjct: 7 TTLVTAALLTSAMAPTAYANQADLQTADDTYVVGEQEQLIGLGSGAAFGALVGGPVGAII 66 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST-LSGLVADNIVKGVL 216 ++ + +++ + R L+ + + + ++ Sbjct: 67 GAMVGGIVGTAVGQDEQIKSQNEDMVELTARNTELERIDINYNQAQIEIARLQQDLQLQS 126 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDAS 275 E + +++ F SS P L +I E++ S E+ + G+ D Sbjct: 127 EERQALMLEVNVH-------FRTGSSDIEPLFQQQLDEIAELMKQSPEMSWQLAGYADRR 179 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---- 331 ++ N+ LS+ R + L G+ D++ + + + N Sbjct: 180 ---GDSQKNFDLSMRRVDAVRDYLESQGLDTDQLL-VDAYGDLEPLKSE-----QNFESD 230 Query: 332 ---RRIDILVEDRQ 342 RR+ + Q Sbjct: 231 FFDRRV--TLRSTQ 242 >gi|315633444|ref|ZP_07888734.1| lipoprotein PlpD [Aggregatibacter segnis ATCC 33393] gi|315477486|gb|EFU68228.1| lipoprotein PlpD [Aggregatibacter segnis ATCC 33393] Length = 273 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 13/112 (11%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + + + V+ I + L + +++ G+TD R N LS R Sbjct: 141 GDFLFDFNKDTLTAQGVEVIDNIAQQLKSAKAKEVTVDGYTDRL---GSDRYNLALSQRR 197 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSA------NRRIDI 336 A L + G+ I I G A D + NRR++I Sbjct: 198 ADRVKARLAELGLKA-HIVAI-GHGKANQVKACDGSGQALKDCLAPNRRVEI 247 >gi|193076753|gb|ABO11465.2| putative antigen [Acinetobacter baumannii ATCC 17978] Length = 259 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 18/122 (14%) Query: 228 IIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARD 283 I D+ + +F E + KI E + S I + G TD Sbjct: 141 IADRIASVLFAFDRFDASAIEEGTNSVVKIAEQIKKSPTITPIIVSGFTDPL---GKFSY 197 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMN-----SANRRI 334 N LS RA + ++L++ GV RI +I + +++ + NRR+ Sbjct: 198 NQELSSKRANTVAKLLVQQGVDASRI-QIQANSQTD-IYKQCSSNNSSQLIQCLAPNRRV 255 Query: 335 DI 336 +I Sbjct: 256 NI 257 >gi|115315051|ref|YP_763774.1| outer membrane protein FopA [Francisella tularensis subsp. holarctica OSU18] gi|115129950|gb|ABI83137.1| outer membrane protein FopA [Francisella tularensis subsp. holarctica OSU18] Length = 393 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + + + + + ++++G+ + N +LS RA + Sbjct: 283 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 342 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + G+ ++I GF ++ + N+R++ Sbjct: 343 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 382 >gi|270293963|ref|ZP_06200165.1| major outer membrane protein OmpA [Bacteroides sp. D20] gi|270275430|gb|EFA21290.1| major outer membrane protein OmpA [Bacteroides sp. D20] Length = 355 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 30/267 (11%), Positives = 72/267 (26%), Gaps = 21/267 (7%) Query: 53 IINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD 112 + + + + + P +A+ I ++ + + Sbjct: 93 LFAGVNPNRFFEVYGFLGPQVTVAKSANVLIQNDGTMIPDGDEKARARVGASAGLGLKFN 152 Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 + + + ++F +S + +LT K + K N Sbjct: 153 INTKWAIDVEARGAIAPSVFGNISSHRKAEGTGTLTAGVSYIFGGKKFIPVSKIDEDAVN 212 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + E A ++ + + + + Sbjct: 213 AEINRYRSELAQAQADLANCKNALANAKPEVKEVTKEVE-----------------VAGP 255 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 F S+ V ++ ++L + + + G+ D N +LS R Sbjct: 256 RAIFFKIGSARLDDYGKVNIELAAKILKANPDKKYKVAGYAD--KATGSTSWNQKLSEKR 313 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHH 318 A Y L+ GV +D++ + GF Sbjct: 314 AQVVYDALIAQGVDKDQLELV-GFGGT 339 >gi|89900668|ref|YP_523139.1| OmpA/MotB [Rhodoferax ferrireducens T118] gi|89345405|gb|ABD69608.1| OmpA/MotB [Rhodoferax ferrireducens T118] Length = 387 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 18/123 (14%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRA 292 +FD + P L K+ L + +VI + GHTD N +LS RA Sbjct: 269 DSLFDFDKASLKPTGQQDLDKLAAELKNTQFDVIKVTGHTDRI---GSHAYNQKLSERRA 325 Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSA------------NRRIDILVE 339 + LM S G++ D+I G +RR+++ V Sbjct: 326 EAVKGYLMTSIGIAGDKIVT-KGVDGAEPVTKPGECQGKKVSKALIACLQPDRRVEVEVV 384 Query: 340 DRQ 342 + Sbjct: 385 GTR 387 >gi|332184172|gb|AEE26426.1| OmpA family protein [Francisella cf. novicida 3523] Length = 392 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 3/101 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + + + + + + ++++G+ N +LS RA + Sbjct: 282 FAYDKATLNAKGKKAIASFVKFIKDSNIGSVTVKGYASQGQTGGEFDIYNQKLSKKRAEA 341 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + G+ ++I GF + + N+R++ Sbjct: 342 VADYMKQLGLDSEKIIT-KGFGYDDTLGGIPKSDPRNQRVE 381 >gi|254369500|ref|ZP_04985512.1| hypothetical protein FTAG_00492 [Francisella tularensis subsp. holarctica FSC022] gi|157122450|gb|EDO66590.1| hypothetical protein FTAG_00492 [Francisella tularensis subsp. holarctica FSC022] Length = 375 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + + + + + ++++G+ + N +LS RA + Sbjct: 265 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 324 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + G+ ++I GF ++ + N+R++ Sbjct: 325 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 364 >gi|326773952|ref|ZP_08233234.1| OmpA family protein [Actinomyces viscosus C505] gi|326636091|gb|EGE36995.1| OmpA family protein [Actinomyces viscosus C505] Length = 199 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 39/119 (32%), Gaps = 14/119 (11%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNW 285 ++ FD SS VL +I +++ GHTD+ N Sbjct: 83 TVASLSGDVTFDVDSSALTDRAKQVLDEIVKRWNGKPPATVTVVGHTDSV---ADDAHNQ 139 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--------SDPMNSANRRIDI 336 LS RA + L V + SG + ++ +ANR +D+ Sbjct: 140 TLSEQRAKAVADYLTSK-VPSLNVQS-SGKGESEPVASETNADGSVNEAGKAANRHVDV 196 >gi|296158523|ref|ZP_06841353.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] gi|295891091|gb|EFG70879.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] Length = 359 Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 33/249 (13%), Positives = 69/249 (27%), Gaps = 15/249 (6%) Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 + +I + T + R + + + + + + Sbjct: 109 VQEAIGQAATITMGLENGTPLSAANPALRTVSTVRPDLWKIVNTIKADPAVVQCPQAQQP 168 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 ++E + + + + EK L + Q + + T + + V Sbjct: 169 LACAEVELAQAGHDAWRRSFTNAEKRLPEVQDNLRQSAQRALQCTPAVQAPASTSAPVPV 228 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDAS 275 R I++ + LP L + L ++ + I G+ D Sbjct: 229 PAARPQQKITLKADSLFRFNGGDEAAMLPAGKRQLDDVATGLKNAPALHELKITGYADRL 288 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-DPMN------ 328 N LS+ RA + + L GVS G + Sbjct: 289 ---GDKSYNLDLSMQRARTVERYLRAHGVSLP--MTAQGRGSANPLVDCRRTKRDALMQC 343 Query: 329 -SANRRIDI 336 + NRR++I Sbjct: 344 LAPNRRVEI 352 >gi|332969794|gb|EGK08805.1| OmpA/MotB domain protein [Psychrobacter sp. 1501(2011)] Length = 211 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 44/115 (38%), Gaps = 6/115 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR-DNWRLSL 289 +++ SS E + L KI ++ + +S+ H + N LSL Sbjct: 85 EYRGFYEEGSSQLTKEYLNELDKIAGLMEKYPDAFMSLEAHISEPESKLKKNLSNQTLSL 144 Query: 290 DRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILVEDR 341 R L+ K + +RI + + R ++D + N+R+ ++ + Sbjct: 145 ARVEGVKNYLILKHKIDPNRIRTYT-YGAERPIASNDEVEGIRLNQRVYAVIRND 198 >gi|134302319|ref|YP_001122288.1| ompA family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134050096|gb|ABO47167.1| ompA family protein [Francisella tularensis subsp. tularensis WY96-3418] Length = 393 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + + + + + ++++G+ + N +LS RA + Sbjct: 283 FAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 342 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + G+ ++I GF ++ + N+R++ Sbjct: 343 VADYMKQLGLDSEKIIT-KGFGYNDTLGGIHKSDPRNQRVE 382 >gi|21328690|gb|AAM48696.1| OmpA family protein [uncultured marine proteobacterium] Length = 488 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 93/311 (29%), Gaps = 26/311 (8%) Query: 51 MWIINA-TDDDTKKAIEQYFNPFGKN--LMTASKGIFDEQNPPERSSQNKIDLSIDEHIT 107 +++ + ++ + + Q G+ L + GI + Q + + Sbjct: 182 LYLYSQPSNPNRFITMSQLVAMLGEEPGLWPLTAGIQYPAFLTGKDDQTQALQQLLRVFE 241 Query: 108 KNSVDLKIG-----------STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 G + ++ N + + L Sbjct: 242 PPRPMPPKGVNTPGRLTVSTDQVAQDTLVQVSLNCDQPMAPADIQAPAHPLQAPIYLIAA 301 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 K ++ ++ + + + R + ++ + ++ ++ ++ Sbjct: 302 PKKMQNITRAFWAFLLTPEAQDAVRTLGFISRSPKKTEIHGQSGLLINAILNTDMDMRTE 361 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISI--RGHTD 273 L F + I ++ LQ + +A E + G +D Sbjct: 362 DLRLAVLNLNGYERMSLAFRFLEGMQIMDADSQSNLQFLKRLFVAGYFEGRDVMFVGFSD 421 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS---KISGFAHHRLKIASDPMNS- 329 + A N ++SLDRA + + + + + ++S ++ G +D Sbjct: 422 SQ---GSAEGNVQISLDRARAVRAT-IATLLDDSQLSDGFEVLGLGEGLPLACNDTAWGQ 477 Query: 330 -ANRRIDILVE 339 NRR++I V+ Sbjct: 478 NQNRRVEIWVK 488 >gi|325068018|ref|ZP_08126691.1| OmpA/MotB [Actinomyces oris K20] Length = 139 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 39/119 (32%), Gaps = 14/119 (11%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKI-GEVLAHSTEVISIRGHTDASPFRNIARDNW 285 ++ FD SS VL +I +++ GHTD+ N Sbjct: 23 TVASLSGDVTFDVDSSALTDRAKQVLDEIVKRWNGKPPATVTVVGHTDSV---ADDAHNQ 79 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--------SDPMNSANRRIDI 336 LS RA + L V + SG + ++ +ANR +D+ Sbjct: 80 TLSEQRAKAVADYLTSK-VPSLNVQS-SGKGESEPVASETNADGSVNEAGKAANRHVDV 136 >gi|332293247|ref|YP_004431856.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332171333|gb|AEE20588.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 275 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 13/129 (10%) Query: 221 RTGILISIIDQRNTPMFDKSSSIP-LPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFR 278 + + I+ F + +++ L+K+ L I GH SP R Sbjct: 151 YSELEINETTVLFGVFFKGGTDKMLGSSSVITLRKVVRFLEGYPTRKILITGHICCSPDR 210 Query: 279 NIA---RDN----WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331 +N LS DR Y L+K+G+S R+ G A+ D + N Sbjct: 211 EPQLDGYNNRTGSMTLSEDRGKMVYDYLIKNGISAGRLK-YRGKAYTEPL---DWEETKN 266 Query: 332 RRIDILVED 340 RR+++ + + Sbjct: 267 RRVEMTILE 275 Score = 41.5 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 14/106 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ S + + V L + + + + ++G+TD N +L+ R + Sbjct: 26 FNTDSYEVVSKERVKLDSLVKHHDRDSIRLVLKGYTDQF---AGRDYNLKLAQRRVAATK 82 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 + L + + I + + RR+DI V ++ Sbjct: 83 EFLKAFTIDT--LQAI---GELQ----DASWRA--RRVDISVIVKE 117 >gi|254457971|ref|ZP_05071398.1| putative membrane protein [Campylobacterales bacterium GD 1] gi|207085364|gb|EDZ62649.1| putative membrane protein [Campylobacterales bacterium GD 1] Length = 393 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 51/376 (13%), Positives = 104/376 (27%), Gaps = 69/376 (18%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKG 82 D + W I YAD M L+ F+ + ++ A T S Sbjct: 3 KQDKNESQNFW-ISYADLMAGLL--FVFILVVGAIVVKTLLMQSDLQTIRLNLEKEKSAL 59 Query: 83 IFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEH 142 E E+ + + +S + + ++ L + + K + L+N + L+ +++ Sbjct: 60 ELSESQLFEKKKKLRELVSKLQASREENMRLSMQISMLKSETDELKNEVSILNLDIKTKA 119 Query: 143 CKNSLTR---------------DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMK 187 K +L+ D+ + E K E L + + Sbjct: 120 SKLTLSEKEMQLLKELLLENEEDANMLRYKIDILHKEVEGTKTEITQLQSFVQSANARHE 179 Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-------------- 233 + + + L + I I + Sbjct: 180 LDSSFIKIRDEEIAQLEKALLLKSRDYQRVIEDLNITKIKIKNLTGIKISVVQRLKKKLG 239 Query: 234 ----------------TPMFDKSSSIPLPETIVVLQK----------IGEVLAHSTEVIS 267 +F + + P L + + ++I+ Sbjct: 240 NSIEIDPQTGALRFSSNILFTQGEAELKPSAKKELSRILGKYIDVLLNDPKMRRYVDLIT 299 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR-----ISKISGFAHHRLKI 322 I GHT++ N LS RA + + L +R SG + + Sbjct: 300 IEGHTNSD---GSYLFNLDLSQRRALAVMEFLYTQ-YPNNRELFKKYLSASGRSFAEPIL 355 Query: 323 ASDPMNSAN--RRIDI 336 ++ + RRI+I Sbjct: 356 DANKKEDKDASRRIEI 371 >gi|163854145|ref|YP_001642188.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens PA1] gi|163665750|gb|ABY33117.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1] Length = 717 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 11/209 (5%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + + + + P + + + ++ Sbjct: 491 VDDDGRLLRRSRRYRDGREVVIINNAYGGAPRPIYEDVVELPPPDIRIPRDRYVVDYEQA 550 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVV 251 + A + + + + + + + NT FD S P+ Sbjct: 551 DERAVYEALSAPPVQKLDRRYTLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKR 610 Query: 252 LQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 L I E + + EV I G+TDA DN LS RA S VL ++ V Sbjct: 611 LSTIAEAINRTIKDNPQEVFLIEGYTDAV---GSDIDNLSLSDRRAQSVASVLTQNFQVP 667 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRI 334 + ++ G+ LK+ + N NRR+ Sbjct: 668 PENLTT-QGYGEQYLKVNTQEANRENRRV 695 >gi|126463592|ref|YP_001044706.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126105256|gb|ABN77934.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 512 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 26/240 (10%), Positives = 65/240 (27%), Gaps = 16/240 (6%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 ++ + + + + S ++ + + Sbjct: 276 TGQTARGAARVLPLTDSCGFPLVPSPLAVKSEDYPLALPVFLVSPPRRLPLFAREFLEFL 335 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 S + + + Q L I + D + + + Sbjct: 336 SSAPAQAAVAEAGFVDRRPSQVPLASDGQRLMNAIRIAGDEVPLDEVKRLTDLMAGADRL 395 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIA 281 I+ F+ + P++ L ++ ++L + + G +D A Sbjct: 396 SITFR-------FEAGTDSLEPQSRESLSELIKLLEIGRFRGHELMLVGFSDGR---GPA 445 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + N LS +RA + L + V E + F + NRR+++ + Sbjct: 446 KTNLDLSRERAETVAAALRAA-VPELGPPLVESFGEALPLACDTTVAGRRMNRRVELWLR 504 >gi|89052778|ref|YP_508229.1| OmpA/MotB [Jannaschia sp. CCS1] gi|88862327|gb|ABD53204.1| phosphate ABC transporter substrate-binding protein, PhoT family [Jannaschia sp. CCS1] Length = 513 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 54/153 (35%), Gaps = 11/153 (7%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + L+ I + + + + + + ++ F+ + ++ Sbjct: 368 QGERLSNAIRAAGEDVDLQELQTVMEVLDSAERLSTTLR-------FNAGGADLDIQSRA 420 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE-DRI 309 + ++ + T S + N RLSL RA +M +GV+ DR+ Sbjct: 421 SVGRLAAAIERGTFDGRQLIFAGFSDGDGPSTVNARLSLRRADVVRDAVMAAGVAALDRV 480 Query: 310 SKIS-GFAHHRLKIASDPMNSA--NRRIDILVE 339 ++ GF D NRR+++ V+ Sbjct: 481 ELVTVGFGEAMPMACDDTDWGRAVNRRVEVWVD 513 >gi|301165251|emb|CBW24822.1| putative outer membrane protein [Bacteroides fragilis 638R] Length = 381 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 6/129 (4%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISI-IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + V + + V + I+ ++ D F+ + + L ++ E+L Sbjct: 231 EIEKPVERIVERVVEKKVEVPAIIDTMACDLLENIHFEFDRDVITATSERTLDRLAELLK 290 Query: 261 HSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + I G+TDA + N LS RA + L+ GV R+ K G Sbjct: 291 SYPDSRFLITGYTDA---KGSDSYNLTLSARRAEKVHAALIGRGVPA-RMIKWRGVGKRA 346 Query: 320 LKIASDPMN 328 I++ + Sbjct: 347 AIISATAAD 355 >gi|115377102|ref|ZP_01464317.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1] gi|310822806|ref|YP_003955164.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] gi|115365877|gb|EAU64897.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1] gi|309395878|gb|ADO73337.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1] Length = 381 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 36/117 (30%), Gaps = 17/117 (14%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI--------SIRGHTDASPFRNIARDNWRLS 288 F S+ L +A + + GHTD+ N LS Sbjct: 256 FASGSAELAVGERGKLDHSHARIAEAVSRYGRFAALRLYVLGHTDSV---GATASNRELS 312 Query: 289 LDRAYSAYQVLMKSGVSEDRI-SKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQ 342 L RA S K G+ R+ GF + + NRR + ++ + Sbjct: 313 LQRARSIAAYFHKRGL---RLPIFYEGFGEQAPAVMTPDETAEVGNRRAEYILAVDE 366 >gi|146278796|ref|YP_001168955.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145557037|gb|ABP71650.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 499 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 25/228 (10%), Positives = 65/228 (28%), Gaps = 20/228 (8%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + L + + S +T + + + + + Sbjct: 281 GFPLLPSPLAVKSEDYPLSLPVFLVTPRRRLPLFAREFLEFLSTAPAQRAVAEAGFVDRR 340 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + Q L I + + + + I+ F++ + Sbjct: 341 PSRVPLVSDGQRLMNAIRVAGEEVPLAELKRLTGLMAGAERLSITFR-------FEEGGN 393 Query: 243 IPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 ++ L + +++ + + + G +D A N LS DRA + + L Sbjct: 394 KLEAQSREALTDLVKLVEVGRFRDQQLMLVGFSDGR---GSAEANLSLSRDRAATVARAL 450 Query: 300 MKS--GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 ++ ++ + GF + NRR+++ + G Sbjct: 451 QEAAPDLAPP---LVEGFGEALPLACDTTVAGRRMNRRVELWLRPLTG 495 >gi|318079837|ref|ZP_07987169.1| secreted protein [Streptomyces sp. SA3_actF] Length = 166 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 + +FDK P ++ IGE + G TD LS Sbjct: 57 QAEVLFDKDKFALDPSGRARIKAIGEEAKKQRARTVRVFGFTDNL---GSYAHGKTLSKR 113 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 RA + L + + + ++ G++ + NRR+++ Sbjct: 114 RADIVHDELAQY-LGPEVTFEVRGYSEDYPIADNTTEEGRRKNRRVEV 160 >gi|126661869|ref|ZP_01732868.1| possible outer membrane protein [Flavobacteria bacterium BAL38] gi|126625248|gb|EAZ95937.1| possible outer membrane protein [Flavobacteria bacterium BAL38] Length = 295 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 57/154 (37%), Gaps = 15/154 (9%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + ++ + L V + + ++ ++ + +F S + E + Sbjct: 152 QFEEARVPDADELIEPVELHQTPYDTAKVGDKLVMNNLYFYDRSGIFVPESLPVMEELLE 211 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 + +AH I I+GH + ++L RA + + L+ + + + R+ Sbjct: 212 FM------IAHPKVKIEIQGHICCQLGEDPE----DIALIRAIAVHNYLVANDIDDKRLM 261 Query: 311 KISGFAHHRLK----IASDPMNSANRRIDILVED 340 F + ++ + NRR++IL+ + Sbjct: 262 -YKSFGSTQPLHKIPEKNEKERNENRRVEILILE 294 Score = 43.8 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 12/111 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 ++ + FD P+ + + E++ I G+ D N L+ Sbjct: 16 EKESFYFDFDQDKFNPKQNELFLTWLNK-DENREILIINGYCDWY---GTFDYNDTLAYK 71 Query: 291 RAYSAYQVLMKSGVS----EDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 R + L + D+I I G+ + + NRR+D+ Sbjct: 72 RINTIQNELQTKENATIFFSDKII-IKGYGER---VQTRKERRFNRRVDVF 118 >gi|126641083|ref|YP_001084067.1| putative antigen [Acinetobacter baumannii ATCC 17978] Length = 174 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 18/122 (14%) Query: 228 IIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARD 283 I D+ + +F E + KI E + S I + G TD Sbjct: 56 IADRIASVLFAFDRFDASAIEEGTNSVVKIAEQIKKSPTITPIIVSGFTDPL---GKFSY 112 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMN-----SANRRI 334 N LS RA + ++L++ GV RI +I + +++ + NRR+ Sbjct: 113 NQELSSKRANTVAKLLVQQGVDASRI-QIQANSQTD-IYKQCSSNNSSQLIQCLAPNRRV 170 Query: 335 DI 336 +I Sbjct: 171 NI 172 >gi|239816686|ref|YP_002945596.1| OmpA/MotB domain protein [Variovorax paradoxus S110] gi|239803263|gb|ACS20330.1| OmpA/MotB domain protein [Variovorax paradoxus S110] Length = 401 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 63/236 (26%), Gaps = 12/236 (5%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 D + + N + ++ + + Sbjct: 164 DATLDTRPTAFFRDSPVNGKDRGVEGYIRTAETQPGQAADALYLERLPTSTVLQEATAAY 223 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + + A R+ Q L L+ T + + + Sbjct: 224 EAGRMSEALSRYEAASRRPDGQQLRIYSGLYLTQASLGRTADAEKTFGTLARLGLETNNL 283 Query: 232 RNTPMFDKSSSIP------LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 +F S+ + L++I A + + GHT + N Sbjct: 284 SVKFLFKPGSTDFLADPKISAAYPMWLRQIARQAAQIDSCVVVTGHTSRT---GSESVNE 340 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---ASDPMNSANRRIDILV 338 RLSL RA S L+ + + SG + A D ++ +RR++ V Sbjct: 341 RLSLQRALSVKTRLVGEAPPLSKKLRESGMGFRENIVGTGADDASDALDRRVEFKV 396 >gi|91786622|ref|YP_547574.1| Type I secretion outer membrane protein TolC [Polaromonas sp. JS666] gi|91695847|gb|ABE42676.1| Type I secretion outer membrane protein, TolC [Polaromonas sp. JS666] Length = 658 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 68/221 (30%), Gaps = 7/221 (3%) Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 Q + + ++ + + + + S + + Sbjct: 442 PSAQDAGQDRTGIDPAELCPQDETVVATVDQIKARFAVAPRRTGSYVVLLPNPDNSVGRV 501 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + + ++ L + S + V + + + T F + S Sbjct: 502 VVQGNRGEQTLAQAQQGTLLDGSVKPFEVSKVQVERDFGAAIAARPPLPESFTLYFQRGS 561 Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + V+ +I E+ I++ GHTD A N L L RA + + + Sbjct: 562 TELTAASKAVMSRIKELAKARKALDITVIGHTDTM---GTAESNEVLGLRRANAIAKQMQ 618 Query: 301 KSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 + G+ I + L +A+ + NRR +I V Sbjct: 619 QLGLRNTAII-VESNGERNLFVATPQNTNEPRNRRAEITVR 658 >gi|332664542|ref|YP_004447330.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332333356|gb|AEE50457.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 226 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 57/194 (29%), Gaps = 19/194 (9%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 + +++ K LA + R+ + +K +L + D Sbjct: 39 SCKNQTPKEPVSPEEDPLGAIEDMVNETKALAKEEAARVDEKTQKALESLRSVKFDP--- 95 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI------- 266 + I +F + +PE VL + L ++ Sbjct: 96 --ETVGEKLYQAILAGKDLKMEVFLFKTLNFVPEQADVLPAMKPELTQLANIMAAFPEFK 153 Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 I HT N LS RA S + L K GV++ R+ G+ Sbjct: 154 FQIAAHT---AGVGDHILNLTLSHHRATSIVEALEKMGVAKSRMKA-RGYGDELPIADHT 209 Query: 326 PMNSA--NRRIDIL 337 N+RI++ Sbjct: 210 MPEGREANQRIELT 223 >gi|15607090|ref|NP_214472.1| peptidoglycan associated lipoprotein [Aquifex aeolicus VF5] gi|2984343|gb|AAC07863.1| peptidoglycan associated lipoprotein [Aquifex aeolicus VF5] Length = 203 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 6/119 (5%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 S L V + + I+ +Q FD + + L ++ + + Sbjct: 69 SALESDVDSLRREHEEIRAEIEKLKITGKEQVR-VYFDSNKFTLRDDAKATLDELIDAVR 127 Query: 261 HST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + + + G+ D R N+ LS+ RA + L+K+G+ +++ +I+ + Sbjct: 128 DKDIKKVIVVGYADPRGTRG---YNFELSMKRAQNVAAYLIKNGIPVEKV-RIASYGEE 182 >gi|57168474|ref|ZP_00367608.1| chemotaxis motB protein, putative [Campylobacter coli RM2228] gi|305432893|ref|ZP_07402051.1| chemotaxis motB protein [Campylobacter coli JV20] gi|57020282|gb|EAL56956.1| chemotaxis motB protein, putative [Campylobacter coli RM2228] gi|304444047|gb|EFM36702.1| chemotaxis motB protein [Campylobacter coli JV20] Length = 243 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 KK + P W + YADF+++L+A F+ +W I+ T+ +A++ F T Sbjct: 3 KKHKCPECPAG-EKWAVPYADFLSLLLALFIALWAISKTNPAKVEALKTEFVKIFDYTAT 61 Query: 79 AS 80 + Sbjct: 62 QT 63 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 61/188 (32%), Gaps = 11/188 (5%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 K T+ K + + +++ ++ +D K+ Sbjct: 42 PAKVEALKTEFVKIFDYTATQTVQQETQDTYKYKGSQEEKEDELSKLKQMAVNQQEVIKK 101 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIR 269 + + ++++ + F++ S+ + I K L IR Sbjct: 102 LQAALDQSENQEILNLPSKVE---FERGSAQIVSADIQDYLKRIAQLISYLPPQIEIEIR 158 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 G+TD S + L RA + + L++ GVS I+ + + + + P Sbjct: 159 GYTDNSDSALRSY---DLGYTRAENVLKYLIEGGVSTKNIN-LKSYGLNSPINGN-PQAL 213 Query: 330 ANRRIDIL 337 N R+ I Sbjct: 214 ENNRVQIY 221 >gi|239504183|ref|ZP_04663493.1| small protein A (tmRNA-binding) [Acinetobacter baumannii AB900] Length = 259 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 18/122 (14%) Query: 228 IIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARD 283 I D+ + +F E + KI E + S I + G TD Sbjct: 141 IADRIASVLFAFDRFDASAIEEGTNSVVKIAEQIKKSPTITPIIVSGFTDPL---GKFSY 197 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMN-----SANRRI 334 N LS RA + ++L++ GV RI +I + ++ + NRR+ Sbjct: 198 NQELSSKRANTVAKLLVQQGVDASRI-QIQANSQTD-IYKQCSDNNSSQLIQCLAPNRRV 255 Query: 335 DI 336 +I Sbjct: 256 NI 257 >gi|85714482|ref|ZP_01045470.1| OmpA/MotB [Nitrobacter sp. Nb-311A] gi|85698929|gb|EAQ36798.1| OmpA/MotB [Nitrobacter sp. Nb-311A] Length = 318 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 10/110 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285 +T F+ S + LQ I + + +EV I GHTDA DN Sbjct: 191 DLDTINFETGSWDIPDDQAAKLQVIADGINRAISRNPSEVFLIEGHTDAV---GNDVDNL 247 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 LS RA SA ++L + V + + G+ LK+ +D + NRR+ Sbjct: 248 SLSDRRAQSAAELLTQQFQVPPENLVT-QGYGEQNLKVQTDGPSRENRRV 296 >gi|224371704|ref|YP_002605868.1| OmpA3 [Desulfobacterium autotrophicum HRM2] gi|223694421|gb|ACN17704.1| OmpA3 [Desulfobacterium autotrophicum HRM2] Length = 196 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 9/107 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + E++ ++ ++ + ISI GHTD + + N +LSL+RA Sbjct: 95 FNTGDTSLTKESLDLIPEVLNSVKERAPSEISIIGHTDT---KGASVYNNKLSLERANKV 151 Query: 296 YQVLMKSGVSED-RISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339 +++ + + + I + + + NRR++I+V Sbjct: 152 AKIITH--IDANLKNIYIQFHGENDPLVITGDNVSEKRNRRVEIMVR 196 >gi|222086972|ref|YP_002545506.1| peptidoglycan-associated lipoprotein [Agrobacterium radiobacter K84] gi|221724420|gb|ACM27576.1| peptidoglycan-associated lipoprotein [Agrobacterium radiobacter K84] Length = 177 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 40/114 (35%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD S+ + L + + LA I++ GH D N L R Sbjct: 68 DRIFFDTDSTSIRSDASQTLDRQAQWLARYPNYAITVEGHADER---GTREYNLALGARR 124 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVEDRQG 343 A + L GV R+ IS + R D S NRR + V + G Sbjct: 125 AAATKDYLASRGVPAQRMKTIS-YGKERPVATCDDISCWSQNRRA-VTVLNGAG 176 >gi|38146954|gb|AAR11862.1| peptidoglycan-associated lipoprotein [Ehrlichia canis] gi|38146956|gb|AAR11863.1| peptidoglycan-associated lipoprotein [Ehrlichia canis] gi|38146958|gb|AAR11864.1| peptidoglycan-associated lipoprotein [Ehrlichia canis] gi|38146960|gb|AAR11865.1| peptidoglycan-associated lipoprotein [Ehrlichia canis] gi|38146962|gb|AAR11866.1| peptidoglycan-associated lipoprotein [Ehrlichia canis] Length = 141 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 31/102 (30%), Gaps = 7/102 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 FD + +L+K+ + T + GHTD N L R Sbjct: 42 EKIYFDFGKATIGDSDKAILEKVIQKAQKDTNTNIVIVGHTDTR---GTDEYNLELGEQR 98 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMNSA 330 A + +++ S + + +S+P + Sbjct: 99 ANAVKDFIIEHDKSLENRITVQSKGKSEPAVLVYSSNPEEAE 140 >gi|298482993|ref|ZP_07001174.1| outer membrane protein [Bacteroides sp. D22] gi|298270737|gb|EFI12317.1| outer membrane protein [Bacteroides sp. D22] Length = 397 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 6/129 (4%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISI-IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + V + + V + I+ ++ D F+ + + L ++ E+L Sbjct: 247 EIEKPVERIVERVVEKKVEVPAIIDTMACDLLENIHFEFDRDVITATSERTLDRLAELLK 306 Query: 261 HSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + I G+TDA + N LS RA + L+ GV R+ K G Sbjct: 307 SYPDSRFLITGYTDA---KGSDSYNLTLSARRAEKVHAALIGRGVPA-RMIKWRGVGKRA 362 Query: 320 LKIASDPMN 328 I++ + Sbjct: 363 AIISATAAD 371 >gi|260712903|ref|YP_003226958.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIB 11163] gi|258553429|gb|ACV76374.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 273 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 45/187 (24%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K + ++ + + + ++G+ T + +F Sbjct: 60 AKSENIRHNIIMHLVEAVRADIKKEKIEGLEVSTQGDALRFQ-----GNGLFASGQGGLS 114 Query: 246 PETIVVLQKIGEVLAHSTEVI----------------------SIRGHTDASPFRNIARD 283 ++ +++ +G LA + GHTD+ ++ Sbjct: 115 GNSLRIIKLLGHHLADFMPCFAVGSKGAVALSCNPDLVMLETVQVEGHTDS---NGSHQN 171 Query: 284 NWRLSLDRAYSAYQ-------------VLMKSGVSEDRISKISGFAHHRLKIASDPM--N 328 N LS RA SA+ +L + I ++G+ R + Sbjct: 172 NLVLSTTRAISAFNEIVPDSKNNDMPEMLEFQNLLGQPIMAVAGYGEMRPVGNNATAVGR 231 Query: 329 SANRRID 335 +ANRRID Sbjct: 232 AANRRID 238 >gi|222475318|ref|YP_002563735.1| Peptidoglycan-associated lipoprotein precursor [Anaplasma marginale str. Florida] gi|222419456|gb|ACM49479.1| Peptidoglycan-associated lipoprotein precursor [Anaplasma marginale str. Florida] Length = 255 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289 + FD + VL + E + + I GHTD+ N L Sbjct: 59 RVEKVYFDFNKYEIKGSGKKVLLGLVERMKADKRSTLLIIGHTDSR---GTEEYNLALGE 115 Query: 290 DRAYSAYQVLM--KSGVSEDRISKISGFAHHR-LKIASD-----PMNSANRRIDILVE 339 RA + + ++ +S ++ G A L +SD ++ NRR+ ++VE Sbjct: 116 RRANAVKEFILGCDRSLSPRISTQSRGKAEPEVLVYSSDFKEAEKAHAQNRRVVLIVE 173 >gi|184157314|ref|YP_001845653.1| small protein A [Acinetobacter baumannii ACICU] gi|332876511|ref|ZP_08444276.1| OmpA family protein [Acinetobacter baumannii 6014059] gi|183208908|gb|ACC56306.1| Small protein A (tmRNA-binding) [Acinetobacter baumannii ACICU] gi|322507199|gb|ADX02653.1| small protein A (tmRNA-binding) [Acinetobacter baumannii 1656-2] gi|323517176|gb|ADX91557.1| small protein A (tmRNA-binding) [Acinetobacter baumannii TCDC-AB0715] gi|332735280|gb|EGJ66342.1| OmpA family protein [Acinetobacter baumannii 6014059] Length = 259 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 16/121 (13%) Query: 228 IIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARD 283 I D+ + +F E + KI E + S I + G TD Sbjct: 141 IADRTASVLFAFERFDASAIEEGTNSVVKIAEQIKKSPTTTPIIVSGFTDPL---GKFSY 197 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMN-----SANRRID 335 N LS RA + ++L++ GV RI +I + L ++ + NRR++ Sbjct: 198 NQELSSKRANTVAKLLVRQGVEPSRI-QIQANSQTDLYKQCSDNNSSQLIQCLAPNRRVN 256 Query: 336 I 336 I Sbjct: 257 I 257 >gi|53715321|ref|YP_101313.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46] gi|60683254|ref|YP_213398.1| putative major outer membrane protein [Bacteroides fragilis NCTC 9343] gi|253567211|ref|ZP_04844661.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5] gi|265767807|ref|ZP_06095339.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16] gi|13446379|gb|AAK20932.1| major outer membrane protein OmpA [Bacteroides fragilis] gi|52218186|dbj|BAD50779.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46] gi|60494688|emb|CAH09489.1| putative major outer membrane protein [Bacteroides fragilis NCTC 9343] gi|251944042|gb|EES84561.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5] gi|263252479|gb|EEZ24007.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16] gi|301164773|emb|CBW24332.1| putative major outer membrane protein [Bacteroides fragilis 638R] Length = 395 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 46/146 (31%), Gaps = 6/146 (4%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P +I ++++ D+A S LV +I Sbjct: 234 ARPMPQIISEIELANMRRQMNDMAAANQSLQQQLVDAQNQPVAEVAEQVVVTDANI--AP 291 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T F SS P + L + + + ++ G+ D+ N LS R Sbjct: 292 RTVFFTIGSSELSPREEMNLSYLAAKMKEFPDTQYTVYGYADS--ATGTPAFNKELSQKR 349 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFA 316 A + L+K GV R+ +G Sbjct: 350 AQAVVNALVKKYGVDSSRLKVDAGGG 375 >gi|162450138|ref|YP_001612505.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56'] gi|161160720|emb|CAN92025.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56'] Length = 222 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 35/112 (31%), Gaps = 15/112 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI--------SIRGHTDASPFRNIARDNWRLS 288 F+ +S + + L+ + ++ I GHTD A N LS Sbjct: 99 FETNSDVIRAPEVPKLEASLQKISEVVAKTSELGKITLFIVGHTDTV---GSAEHNLALS 155 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 RA + GV G + + NRR+D ++ Sbjct: 156 RKRARAIAAWFKGRGVKLS--IAFEGLGESAPLVKTADQVDEPRNRRVDYIL 205 >gi|269123146|ref|YP_003305723.1| YadA domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268314472|gb|ACZ00846.1| YadA domain protein [Streptobacillus moniliformis DSM 12112] Length = 2073 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 9/184 (4%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + N N L ++ + + K+L++ ++ + + D I + Sbjct: 1894 REEVIIENNPSNDIRDRLIEQNEKLINQNKKLEEDNDRLRRE-NDRIGDEIKELRERIKA 1952 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFR 278 I ++ D + +L I L + + I G+TD Sbjct: 1953 IEKIKMNEDDLYTLDGYRLGIHELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNV--- 2009 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRID 335 + N L L RA + L + G+ I K+S ++ + + N NRR++ Sbjct: 2010 SGENLNLELGLKRANVVAKKLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVE 2069 Query: 336 ILVE 339 I + Sbjct: 2070 IELR 2073 >gi|218533090|ref|YP_002423906.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4] gi|218525393|gb|ACK85978.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4] Length = 723 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 66/211 (31%), Gaps = 11/211 (5%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + + + + P + + + ++ Sbjct: 497 VDDDGRLLRRSRRYRDGREVVIINNAYGGAPRPIYEDVVELPPPDIRIPRDRYVVDYEQA 556 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVV 251 + A + + + + + + + NT FD S P+ Sbjct: 557 DERAVYEALSAPPVQKLDRRYTLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKR 616 Query: 252 LQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 L I E + + EV I G+TDA DN LS RA S VL ++ V Sbjct: 617 LSTIAEAINRTIKDNPQEVFLIEGYTDAV---GSDIDNLSLSDRRAQSVASVLTQNFQVP 673 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + ++ G+ LK+ + N NRR+ + Sbjct: 674 PENLTT-QGYGEQYLKVNTQDANRENRRVTV 703 >gi|312127315|ref|YP_003992189.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311777334|gb|ADQ06820.1| OmpA/MotB domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 241 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 27/196 (13%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 S ++ + K K +++L+ + + L+ + + + Sbjct: 38 SYSEILQAKIKEREKLTENLKKTEQKLESIVGIRKKIVEDLIKEFKNSKLSLKIDPQTGA 97 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKI---------GEVLAHSTEVISIRGHTDASP 276 I+ + +F+ +S LQ+ + I I GHTD Sbjct: 98 ITFSES---VLFEYNSYNLTQNGKKFLQQFIPKYIGILLSPQNKDNISQIIIEGHTDNR- 153 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSE-------DRISKISGFAHHRLKIAS---DP 326 N LS RA+ + ++ + + + +G + +L + D Sbjct: 154 --GDYLYNLELSQKRAFEVVRYILSNQFPDFPQKQLLKKYITSNGRSFSQLIYKNGKVDQ 211 Query: 327 MNSANRRIDILVEDRQ 342 S RR++ ++ Sbjct: 212 DAS--RRVEFKFRLKE 225 >gi|291278841|ref|YP_003495676.1| hypothetical protein DEFDS_0426 [Deferribacter desulfuricans SSM1] gi|290753543|dbj|BAI79920.1| hypothetical protein [Deferribacter desulfuricans SSM1] Length = 200 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR--NIARDNWRLSLDRAYS 294 F L +V I GHTD+ P + N R+N+ LS+ RA Sbjct: 96 FYFKKGEYRFNLDNETISFFRNLN-RDKVYYIYGHTDSLPVKPNNKYRNNYELSILRAEF 154 Query: 295 AYQVLMKS-GVSEDRISKISGFAHHRLKIASD-PMNSANRRIDIL 337 +++ K G+ + +KI GF +++ NRR+++ Sbjct: 155 IKELIRKYSGIDSN--AKIVGFGAFFPLVSNGLQGAEKNRRVELY 197 >gi|269122961|ref|YP_003305538.1| YadA domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268314287|gb|ACZ00661.1| YadA domain protein [Streptobacillus moniliformis DSM 12112] Length = 2091 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 9/184 (4%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 + N N L ++ + + K+L++ + + + D I + Sbjct: 1912 REEVIIENNPSNDIRDRLIEQNEKLINQNKKLEEDNDILRRE-NDRIGDEIKELRERIKA 1970 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFR 278 I ++ D + +L I L + + I G+TD Sbjct: 1971 IEKIKMNEDDLYTLDGYRLGIHELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNV--- 2027 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRID 335 + N L L RA + L + G+ I K+S ++ + + N NRR++ Sbjct: 2028 SGEDLNLELGLKRANVVAKKLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVE 2087 Query: 336 ILVE 339 I + Sbjct: 2088 IELR 2091 >gi|75676986|ref|YP_319407.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255] gi|74421856|gb|ABA06055.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255] Length = 663 Score = 63.8 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 78/252 (30%), Gaps = 18/252 (7%) Query: 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSE 152 + + + + +V+ + G Q+ + I + N + Sbjct: 402 GNDTRNIVVRQDGTQIITVNDRDGRMLQRIRRDPRGQEIVIIDNRHPGHGGRGGALAAGV 461 Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD--LAKKISSTLSGLVADN 210 + +PP + + D +A + S D Sbjct: 462 AAGIAAGAIGSYFVSLPPPQIGIPPDRYIVEAEGAPPEVIYDTLMAPPVESIQRPYTLDE 521 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-----EV 265 + + I +T F+ S + LQ I + + EV Sbjct: 522 VRYSPMVRARMPSI------DLDTINFETGSWDISDDQAAKLQVIADGINRVVARNPGEV 575 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324 I GHTDA DN LS RA SA ++L + V + + G+ LKI + Sbjct: 576 FLIEGHTDAV---GNDVDNLSLSDRRAQSAAELLTQQFQVPPENLVT-QGYGEQNLKIQT 631 Query: 325 DPMNSANRRIDI 336 D + NRR+ + Sbjct: 632 DGPSRENRRVTV 643 >gi|299141391|ref|ZP_07034528.1| outer membrane protein [Prevotella oris C735] gi|298577351|gb|EFI49220.1| outer membrane protein [Prevotella oris C735] Length = 425 Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 59/188 (31%), Gaps = 13/188 (6%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 K + +P + +L +++ ++ K Sbjct: 245 EAGLKLTYSVGKKVKRTEALQPSEPNMPEVDALHVLPERKEGNESEMTKVTEQVEQSKTT 304 Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VIS 267 + V V + ++ T F +S+ + +Q++ +L + + I Sbjct: 305 ERPVSEVSVAAAESVAIVDFP----TVYFAFNSARISSKEEAKMQQMLHLLQDNPKLNII 360 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + G D N RLS+ RA + L G++ RI G + ++ Sbjct: 361 VTGWCDTV---GSDAVNLRLSVRRAKALKTWLTTQGINAARIKTA-GKG----RDFNEKN 412 Query: 328 NSANRRID 335 + RR + Sbjct: 413 AAKARRSE 420 >gi|307726644|ref|YP_003909857.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003] gi|307587169|gb|ADN60566.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003] Length = 357 Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 53/167 (31%), Gaps = 18/167 (10%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 A +R +Q+ +K + + + I R +F Sbjct: 189 ARAEQRLPDVQENLRKSAESALQCKHAAFAASAATPAAAPPTVSRTIALRADLLFRFDGG 248 Query: 243 I---PLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 LP L ++ L + ++I G+TD N RLSL RA + + Sbjct: 249 NDAAMLPAGRRELDEVARSLKTVSALRELAITGYTDRL---GENAHNQRLSLQRAQTVAR 305 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDI 336 L GV+ + G A + + NRR++I Sbjct: 306 YLRAHGVTSP--ISVRGLASAKPVTECRQTRRDELVRCLAPNRRVEI 350 >gi|327404032|ref|YP_004344870.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327319540|gb|AEA44032.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 734 Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 41/122 (33%), Gaps = 19/122 (15%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSL 289 FD + P+ V L KI ++ + I + HTD A N LS Sbjct: 615 DLKPIYFDLAKYDIRPDAAVELDKIVAIMNEFPTMVIELGSHTDCR---GTALKNLELSQ 671 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHH-------------RLKIASDPMNSANRRIDI 336 RA ++ + RI G+ + K + +S NRR + Sbjct: 672 KRADASANYIKSKIKDPYRI-AGKGYGETKILNGCSCEGPKKQPKYT-EAQHSVNRRTEF 729 Query: 337 LV 338 LV Sbjct: 730 LV 731 >gi|325268738|ref|ZP_08135366.1| major outer membrane protein OmpA family protein [Prevotella multiformis DSM 16608] gi|324988906|gb|EGC20861.1| major outer membrane protein OmpA family protein [Prevotella multiformis DSM 16608] Length = 387 Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 17/165 (10%) Query: 182 KILAMKRKKRLQDLAKKIS--STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + + L L K+ + + D + ETT + +++ + F+ Sbjct: 234 EAINAQHQAALDALNAKLRDSEAENARLRDQLANQKPVETTSESVK-QLVNTPVSVFFNI 292 Query: 240 S-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + S+I + +V +Q + + + + + G+ D+ N +LS RA + Sbjct: 293 NKSTIASQKDLVNVQALAKYAKDNNNSLLVTGYADS--ATGTPAYNQKLSERRANTVANE 350 Query: 299 LMKSGVSEDRISKISGFA--HH-RLKIASDPMNSANRRIDILVED 340 L+K GV +I+ + G S NRR + V + Sbjct: 351 LVKMGVENSKITAV-GKGGVETLSPI-------SFNRRATVQVTE 387 >gi|255008700|ref|ZP_05280826.1| putative outer membrane protein [Bacteroides fragilis 3_1_12] gi|313146435|ref|ZP_07808628.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313135202|gb|EFR52562.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 399 Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 8/121 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + I + +V + K V T + I D + F + E+ + L KI Sbjct: 247 QYIDRPVDRIVERIVEKRVEVP---TVVESHICDLFDNIHFAFDKDVVTSESELTLDKIA 303 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 ++L I G+TDA N LS RA + Y+ L+K V + K G Sbjct: 304 DLLKSYPDNNFLITGYTDAR---GGDNYNMDLSKRRAKAVYRALLKRQV-PQHMLKWRGV 359 Query: 316 A 316 Sbjct: 360 G 360 >gi|255008471|ref|ZP_05280597.1| putative outer membrane protein [Bacteroides fragilis 3_1_12] gi|313146200|ref|ZP_07808393.1| major outer membrane protein OmpA [Bacteroides fragilis 3_1_12] gi|313134967|gb|EFR52327.1| major outer membrane protein OmpA [Bacteroides fragilis 3_1_12] Length = 372 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 4/140 (2%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++ + L +++ S L + T+ + + F Sbjct: 220 GSQVDQNAINEELNRYRSELAKAQSDLADAKNALANVKPVTKEVVKEVEVAGPRAIFFQI 279 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S +V +Q ++L + + + G+ D A+ N +LS RA + Y Sbjct: 280 GKSKIDDYGMVNIQLAAKILKANPDKKYKVAGYAD--KATGSAKWNQKLSEARAQAVYDA 337 Query: 299 LMKSGVSEDRISKISGFAHH 318 L+K GVS+D++ + GF Sbjct: 338 LIKEGVSKDQLELV-GFGGT 356 >gi|240141603|ref|YP_002966083.1| hypothetical protein MexAM1_META1p5204 [Methylobacterium extorquens AM1] gi|240011580|gb|ACS42806.1| Conserved hypothetical protein; putative OmpA family member [Methylobacterium extorquens AM1] Length = 729 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 66/211 (31%), Gaps = 11/211 (5%) Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + + + + P + + + ++ Sbjct: 503 VDDDGRLLRRSRRYRDGREVVIINNAYGGAPRPIYEDVVELPPPDIRIPRDRYVVDYEQA 562 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVV 251 + A + + + + + + + NT FD S P+ Sbjct: 563 DERAVYEALSAPPVQKLDRRYTLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKR 622 Query: 252 LQKIGEVLAHS-----TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 L I E + + EV I G+TDA DN LS RA S VL ++ V Sbjct: 623 LSTIAEAINRTIKDNPQEVFLIEGYTDAV---GSDIDNLSLSDRRAQSVASVLTQNFQVP 679 Query: 306 EDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + ++ G+ LK+ + N NRR+ + Sbjct: 680 PENLTT-QGYGEQYLKVNTQDANRENRRVTV 709 >gi|331699296|ref|YP_004335535.1| OmpA/MotB domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326953985|gb|AEA27682.1| OmpA/MotB domain protein [Pseudonocardia dioxanivorans CB1190] Length = 222 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 8/101 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S++ + +G L + + + GH +P A LS RA + Sbjct: 126 FAADSAVLDGAAAETVAGVGRWLVAHPDVRVRLTGHAADTP--GPAEVALALSQQRAQAV 183 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + L +GV R+S G P +A+RR++I Sbjct: 184 AEALRANGVDPSRVSA-RGVGDADPL----PTPAASRRVEI 219 >gi|255035472|ref|YP_003086093.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254948228|gb|ACT92928.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 314 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F++S++ + L KI L+ + I++ HTD + N RL+ +RA Sbjct: 211 FEQSTTNLSKSSTKNLSKILNCLSENRSVKITLESHTDNV---GDLKKNLRLAEERAARI 267 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 Q L+ + +SE RI + ++ S NRRI + V+ Sbjct: 268 RQYLVDNKISESRI-QCRILGPLLPLAPNNNEYNRSLNRRIVVKVQG 313 >gi|160894083|ref|ZP_02074861.1| hypothetical protein CLOL250_01637 [Clostridium sp. L2-50] gi|156864116|gb|EDO57547.1| hypothetical protein CLOL250_01637 [Clostridium sp. L2-50] Length = 251 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 68/202 (33%), Gaps = 28/202 (13%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 +S +S E + + +++ L +++ L +A S ++ L + + + Sbjct: 40 QSKSQYESKQAELDKQKEIIKEQEQLLKDQQEELDRIAGIRSDLVAALRDEFADSSLNVK 99 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI---------GEVLAHSTEVISIR 269 I+ + +FD + S E L++ E I I Sbjct: 100 VDEKTGAITF---DASVLFDVADSDLKEEGKTFLKEFLPKYCKVLLDEKYRDYVSEIIIE 156 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVL--MKSGVSED-------RISKISGFAHHRL 320 GHTD N LS RA+S + +G+ + +G ++ Sbjct: 157 GHTDT---NGSYIYNLELSQHRAFSVAKYCLTESNGIISSTDVELLRSVLTANGKSYSNP 213 Query: 321 KIASDPM---NSANRRIDILVE 339 D ++ RR++IL Sbjct: 214 IYKEDGAVDLEAS-RRVEILFR 234 >gi|90412812|ref|ZP_01220812.1| hypothetical protein P3TCK_26075 [Photobacterium profundum 3TCK] gi|90326171|gb|EAS42598.1| hypothetical protein P3TCK_26075 [Photobacterium profundum 3TCK] Length = 319 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 5/104 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + L ++ + L + E I G TD++ A N ++S RA + Sbjct: 220 YQTGQVDVNDYGRYNLNEVAQTLQANPELTAEIIGRTDST---GTAAINAKVSEARANAV 276 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 Q L+ +GV R+ ++ A + R ++++++ Sbjct: 277 SQYLIDNGVDASRL-TVTSVADQNPLTDDSGKSLIERSVEVVIK 319 >gi|53712971|ref|YP_098963.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46] gi|60681183|ref|YP_211327.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343] gi|253563051|ref|ZP_04840508.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5] gi|265763068|ref|ZP_06091636.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16] gi|52215836|dbj|BAD48429.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46] gi|60492617|emb|CAH07389.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343] gi|251946827|gb|EES87109.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5] gi|263255676|gb|EEZ27022.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16] gi|301162672|emb|CBW22219.1| putative outer membrane protein [Bacteroides fragilis 638R] Length = 372 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 4/140 (2%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++ + L +++ S L + T+ + + F Sbjct: 220 GSQVDQNAINEELNRYRSELAKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAIFFQI 279 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S +V +Q ++L + + + G+ D A+ N +LS RA + Y Sbjct: 280 GKSKIDDYGMVNIQLAAKILKANPDKKYKVAGYAD--KATGSAKWNQKLSEARAQAVYDA 337 Query: 299 LMKSGVSEDRISKISGFAHH 318 L+K GVS+D++ + GF Sbjct: 338 LIKEGVSKDQLELV-GFGGT 356 >gi|83952036|ref|ZP_00960768.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius nubinhibens ISM] gi|83837042|gb|EAP76339.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius nubinhibens ISM] Length = 667 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 37/281 (13%), Positives = 83/281 (29%), Gaps = 13/281 (4%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 + + G N +R + D I+ N + + G+ Sbjct: 375 FEKFALGALGAVAVGTILNNGNKVLSNSGDRVVVERSDGEIEVLKDDNVLLRRPGAEVTT 434 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 +++ + + + + + +++ Sbjct: 435 ERFSDGSVRETVTRANGVKVVTIKASNGQVLRRVRVMPDGQQIVLFDDTVTVEPVEVTEL 494 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS---IIDQRNTPMFD 238 + + + + +++ + L+ D + + + R + + + F Sbjct: 495 PRTSTRSIQLSELSEEELRAALAEKERDQLHRHYTLQQVREIRAVRDLVPVIELEAINFA 554 Query: 239 KSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 S+ L+ +G + + EV + GHTDA A N LS RA Sbjct: 555 TDSAAITASEAEELRALGLAMSELIERNPNEVFLVEGHTDAV---GSASYNLALSDRRAE 611 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRR 333 S L + V + + + G+ LKI + NRR Sbjct: 612 SVALALTEYFDVPPENMV-VQGYGEANLKIRTPGPERQNRR 651 >gi|309789305|ref|ZP_07683896.1| chemotaxis motB domain protein [Shigella dysenteriae 1617] gi|308922840|gb|EFP68356.1| chemotaxis motB domain protein [Shigella dysenteriae 1617] Length = 111 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 33/74 (44%) Query: 41 MTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDL 100 MT +MAFFLVMW+I+ + I +YF +T I + ++P + Sbjct: 1 MTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQS 60 Query: 101 SIDEHITKNSVDLK 114 + + N +LK Sbjct: 61 QGEVNKQPNIEELK 74 >gi|218259639|ref|ZP_03475310.1| hypothetical protein PRABACTJOHN_00969 [Parabacteroides johnsonii DSM 18315] gi|218224977|gb|EEC97627.1| hypothetical protein PRABACTJOHN_00969 [Parabacteroides johnsonii DSM 18315] Length = 386 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 10/150 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L DL +I++ + + E + N F +S+ Sbjct: 241 ALLNDLNGQINALRAENDELSKRPVSCPECEEVVTNVVNNYVDNVVYFRINSAKIDKNQQ 300 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDR 308 V + + + + I + G+ D N +LS RA + + L+ K G+S + Sbjct: 301 VSIFNTAQFMKDNNVPIKVIGYADKKTGTGS--YNMQLSEKRARAVAKELIDKYGISSSQ 358 Query: 309 ISKISGFAHH-RLKIASDPMNSANRRIDIL 337 I I + ++ R+ I+ Sbjct: 359 I-TIEWKGSDVQPYNENNWN-----RVVIM 382 >gi|118497351|ref|YP_898401.1| OmpA family protein [Francisella tularensis subsp. novicida U112] gi|195536039|ref|ZP_03079046.1| outer membrane associated protein [Francisella tularensis subsp. novicida FTE] gi|208779140|ref|ZP_03246486.1| outer membrane associated protein [Francisella novicida FTG] gi|118423257|gb|ABK89647.1| OmpA family protein [Francisella novicida U112] gi|194372516|gb|EDX27227.1| outer membrane associated protein [Francisella tularensis subsp. novicida FTE] gi|208744940|gb|EDZ91238.1| outer membrane associated protein [Francisella novicida FTG] Length = 392 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 3/101 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + + + + + ++++G+ + N +LS RA + Sbjct: 282 FAYDKATLNAKGKKAIASFVNFIKDSNIGSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 341 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + G+ ++I GF + + N+R++ Sbjct: 342 VADYMKQLGLDSEKIIT-KGFGYDDTLGGIPKSDPRNQRVE 381 >gi|149918662|ref|ZP_01907150.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica SIR-1] gi|149820503|gb|EDM79917.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica SIR-1] Length = 158 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 50/160 (31%), Gaps = 10/160 (6%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + +L+ + + D + I+ + + R+ F S+ Sbjct: 3 QPSAPIDGKLEPGELAATRPVEPGADDPENPMMGKLRIADNIVDACLLPRDEAYFAYDSA 62 Query: 243 IPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 + L + + + GHTD N L L R+ + L Sbjct: 63 EVSDKAERTLTLLAQCFDTGPMRYQGLVVVGHTDPR---GSNEYNLDLGLQRSVAVKDYL 119 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILV 338 + GV RI R + DP S +R+++I + Sbjct: 120 VDEGVEGGRIET-RSLGERR--ASDDPEDWSDDRKVEIKL 156 >gi|294786072|ref|ZP_06751357.1| outer membrane protein [Fusobacterium sp. 3_1_27] gi|294486294|gb|EFG33659.1| outer membrane protein [Fusobacterium sp. 3_1_27] Length = 70 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 RA S L++ G+SEDRI I + + + NRR++ + R+ Sbjct: 1 RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 55 >gi|256424845|ref|YP_003125498.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] gi|256039753|gb|ACU63297.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588] Length = 295 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 70/202 (34%), Gaps = 13/202 (6%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 +E + D + +++ + L +S S D Sbjct: 95 NEGELSPVEHVDSLNRCVVISWQKSADNTSSMQQGVEKGAISRQLPATEASADSPDEMDA 154 Query: 211 IVKGVL--FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267 I ++ ++ +F+ +I +P ++ +++ ++L+ Sbjct: 155 IGSNTTGTIDSLHPNEILVKKFALQNILFEPDRAILMPPSVYTVEQTAKLLSAYNGYSFE 214 Query: 268 IRGH----TDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 +RGH D + LS++RA Q+L++ G+ D+I+ G + L Sbjct: 215 VRGHVNFTADLRVEPGTPP--FELSINRAKLVKQLLIQYGLPADKITA-RGMGNSELIYP 271 Query: 324 ---SDPMNSANRRIDILVEDRQ 342 + N R+++L+ + Sbjct: 272 YPQNLEEKLKNMRVEVLIYKPK 293 >gi|146342457|ref|YP_001207505.1| hypothetical protein BRADO5616 [Bradyrhizobium sp. ORS278] gi|146195263|emb|CAL79288.1| hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS278] Length = 411 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 20/242 (8%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 D+ K + + + + K D + S + ++I Sbjct: 172 PDDVDPTPVPFFKDSPVYTKDPATEAYVRSCQGAKPGDAVDQTYTNHILASAQVNEAIEA 231 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET--------TR 221 + E R + L LS L + + Sbjct: 232 YNAGRY-KAALELYQTALRMDGGEQLRIYSGIYLSALKLGHTQLAMQAFDRLLDFGLKNS 290 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281 + I + + + +F + KI A + + + GHT A+ + + Sbjct: 291 DRLAIKFLFKPGSTLFYTD-PEVRAPYQAWIGKIARRTAANHVCLEVAGHTSATGYSGV- 348 Query: 282 RDNWRLSLDRAYSAYQVL--MKSGVSEDRISKISGFAHHRLKIAS---DPMNSANRRIDI 336 N RLS+ RA + G+ R+ SG + + + DP ++ +RR+++ Sbjct: 349 --NDRLSVLRAAYVKDQILAEDKGL-AGRLIA-SGRGSREMIVGTGRDDPSDALDRRVEL 404 Query: 337 LV 338 + Sbjct: 405 RI 406 >gi|91777208|ref|YP_552416.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans LB400] gi|91689868|gb|ABE33066.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans LB400] Length = 359 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 29/260 (11%), Positives = 62/260 (23%), Gaps = 20/260 (7%) Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 E Q E+ S T + + ++ ++ + Sbjct: 111 EAIGQAATITIGLENGAPLSAANPALRTVSTVRPDLWKIVNTIKADPAVAQCPQAQQPLA 170 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 + + D + LP + + +R + + + +S + Sbjct: 171 CAEVELAQAGHDAWRRSFTNAEKRLPEVQDNLRQSAQRALQCKQALQAPASMSAPEQGSV 230 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG 270 + M + A + + I G Sbjct: 231 AKPQQKITLKADSL-FRFNGGDEAAMLPAGKRQLDDVATGL------NNAPALHELKITG 283 Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-DPMN- 328 + D N LS+ RA + + L GVS G + Sbjct: 284 YADRL---GDKSYNLGLSMQRARTVERYLRAHGVSVP--ITAQGRGSANPLVDCRRTKRD 338 Query: 329 ------SANRRIDILVEDRQ 342 + NRR++I + + Sbjct: 339 ALVKCLAPNRRVEIELVAAR 358 >gi|329957332|ref|ZP_08297852.1| OmpA family protein [Bacteroides clarus YIT 12056] gi|328523045|gb|EGF50148.1| OmpA family protein [Bacteroides clarus YIT 12056] Length = 410 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 50/135 (37%), Gaps = 6/135 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 P + ++++ ++A S L A + ET +I T Sbjct: 254 PQLISALELSAMQQQMAEMAAANQQLESALTAAQNRPVEVTETEVVVTDPNI--APRTVF 311 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ P ++ + + + + ++ G+ D+ N LSL RA + Sbjct: 312 FKIGSAELSPREVMNISYLAKQMQEFPNATYTVNGYADS--ATGTPEFNKELSLKRAQAV 369 Query: 296 YQVLMK-SGVSEDRI 309 VL+K G+ +R+ Sbjct: 370 VDVLVKDYGIPANRL 384 >gi|319953635|ref|YP_004164902.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237] gi|319422295|gb|ADV49404.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237] Length = 642 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F K S P L K+ V+ + E+ + HT++ N LS DRA + Sbjct: 529 FSKGKSTITPAIAAELDKVAAVVVNFPEIQLKVESHTNSR---GSGASNLSLSQDRASAV 585 Query: 296 YQVLMKSGVSEDRISKISGFAH 317 + L+ GVS + + + G+ Sbjct: 586 RKYLLSKGVSSENVVEYIGYGE 607 >gi|121998194|ref|YP_001002981.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1] gi|121589599|gb|ABM62179.1| OmpA/MotB domain protein [Halorhodospira halophila SL1] Length = 321 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 15/112 (13%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSL 289 R F S + +++ + + I G+ D A N +L+ Sbjct: 214 RTEVYFATGSDDLTRNALDEIRRFVRAVEDNPHWGVILSIGYADTR---GSAEVNEQLAE 270 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-----SANRRIDI 336 RA + L+ G+ EDRI RL D + NRR+++ Sbjct: 271 ARASAVRDELVHLGLPEDRIEV-----EARLIDDEDAEQDIHELAGNRRVEL 317 >gi|90412653|ref|ZP_01220655.1| hypothetical protein P3TCK_08471 [Photobacterium profundum 3TCK] gi|90326461|gb|EAS42873.1| hypothetical protein P3TCK_08471 [Photobacterium profundum 3TCK] Length = 208 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 8/118 (6%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 +L + +Q++ FD + + +L I L + + + GH+D Sbjct: 82 LLAQLPEQKDVIYFDNMNYELSVKNQQLLDPIALRLKLHLDSYLIVIGHSDD---AGSKE 138 Query: 283 DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 +N LS +RA+S + G+ E+RI +I L + NRR++++ Sbjct: 139 ENLVLSFERAFSVAIYISSVFGIEEERI-QIVALGDDELISNGNSEQERQLNRRVEVI 195 >gi|15965621|ref|NP_385974.1| hypothetical protein SMc00141 [Sinorhizobium meliloti 1021] gi|15074802|emb|CAC46447.1| Hypothetical protein SMc00141 [Sinorhizobium meliloti 1021] Length = 671 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 66/197 (33%), Gaps = 13/197 (6%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA 208 E + ++ + Y LPP+ + +D + LS Sbjct: 466 GGEEYVMMYAPEYEEDRPTIVDVGYDLPPMRLSIPVDEYIVDVAEDPDRDYYEFLSEPPV 525 Query: 209 DNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-----A 260 + + + + R + +T F S+ ++ + E + Sbjct: 526 EPVERVYTIDEVRHSARLRDKVRRIDLDTITFATGSAEVSMSQAKTMRNVAEAMNKVLEK 585 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 E I GHTDA + N LS +RA S +L + G+ + + G+ Sbjct: 586 DPGETFFIEGHTDAV---GADQSNLVLSDERAESVAVLLTEVYGIPAENLVT-QGYGERF 641 Query: 320 LKIASDPMNSANRRIDI 336 LKI +D NRR+ I Sbjct: 642 LKIRTDGPEQENRRVTI 658 >gi|212691276|ref|ZP_03299404.1| hypothetical protein BACDOR_00767 [Bacteroides dorei DSM 17855] gi|237726434|ref|ZP_04556915.1| major outer membrane protein OmpA [Bacteroides sp. D4] gi|265752003|ref|ZP_06087796.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA] gi|212286444|dbj|BAG82875.1| majour outer mambrane protein OmpA [Bacteroides vulgatus] gi|212666508|gb|EEB27080.1| hypothetical protein BACDOR_00767 [Bacteroides dorei DSM 17855] gi|229434960|gb|EEO45037.1| major outer membrane protein OmpA [Bacteroides dorei 5_1_36/D4] gi|263236795|gb|EEZ22265.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA] Length = 357 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 21/145 (14%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + I + + + + + + + + I F + PE +V +Q + Sbjct: 228 KEVIKEVIREVPKEVVKEVIKEVPSAAEVAI---------FFKIGKAKISPEGMVNVQLM 278 Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + + + I G D A N LS RA + Y L+ GV E ++ K++ Sbjct: 279 AKAIKANPNAKYKIAGFAD--KATGSASFNQTLSEKRAQAVYDALVAEGVKESQLEKVA- 335 Query: 315 FAHHRLKIASDPMNSAN--RRIDIL 337 D M N R+ IL Sbjct: 336 MGGT------DNMFGKNYLNRVVIL 354 >gi|254372716|ref|ZP_04988205.1| outer membrane associated protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570443|gb|EDN36097.1| outer membrane associated protein [Francisella novicida GA99-3549] Length = 393 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 3/101 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + + + + + ++++G+ + N +LS RA + Sbjct: 283 FAYDKATLNAKGKKAIASFVNFIKDSNIGSVTVKGYASQGQTGSEFDIYNQKLSEKRAQA 342 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + G+ ++I GF + + N+R++ Sbjct: 343 VADYMKQLGLDSEKIIT-KGFGYDDTLGGIPKSDPRNQRVE 382 >gi|226323415|ref|ZP_03798933.1| hypothetical protein COPCOM_01189 [Coprococcus comes ATCC 27758] gi|225208099|gb|EEG90453.1| hypothetical protein COPCOM_01189 [Coprococcus comes ATCC 27758] Length = 539 Score = 63.4 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 66/196 (33%), Gaps = 21/196 (10%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 GK D N E + L + ++ L++ +SS L G + + Sbjct: 346 DGKWYPYVYDSTAYWNGELSDNLETDADVSSMSEDELGELKENQTAVSSGLMGAFKEQGL 405 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-------- 264 + + + + N +F + E L + Sbjct: 406 DSTKIDESTGTVQM-----DNNVLFAWDKADLSEEGKAYLDQFLAAYVPVISSAIEDGKV 460 Query: 265 -VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE-DRISKISGFAHHRLKI 322 I + G+TD+ N +LS +RA + +K+G E ++ G + L + Sbjct: 461 STIVVEGYTDS---AGDEAYNLKLSQERAKTVADY-IKAGYPELTNAIEVVGNGANNLIL 516 Query: 323 ASD--PMNSANRRIDI 336 + +A+RR+++ Sbjct: 517 DGEGKEDAAASRRVEV 532 >gi|237712295|ref|ZP_04542776.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA] gi|229453616|gb|EEO59337.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA] Length = 368 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 21/145 (14%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + I + + + + + + + + I F + PE +V +Q + Sbjct: 239 KEVIKEVIREVPKEVVKEVIKEVPSAAEVAI---------FFKIGKAKISPEGMVNVQLM 289 Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + + + I G D A N LS RA + Y L+ GV E ++ K++ Sbjct: 290 AKAIKANPNAKYKIAGFAD--KATGSASFNQTLSEKRAQAVYDALVAEGVKESQLEKVA- 346 Query: 315 FAHHRLKIASDPMNSAN--RRIDIL 337 D M N R+ IL Sbjct: 347 MGGT------DNMFGKNYLNRVVIL 365 >gi|222148525|ref|YP_002549482.1| OmpA family protein [Agrobacterium vitis S4] gi|221735511|gb|ACM36474.1| OmpA family protein [Agrobacterium vitis S4] Length = 880 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285 +T F S+ L+K+ + + E I GHTDA A N Sbjct: 759 DLDTVTFATGSADISMNQAGTLKKVADAIVRVLKDDPGETFLIEGHTDAV---GSAESNL 815 Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA S VL + G+ + + G+ LK+ + NRR+ + Sbjct: 816 VLSDRRAESVANVLTQVYGIPPENMIT-QGYGEQFLKVMTYGPEQQNRRVTV 866 >gi|212286442|dbj|BAG82874.1| majour outer mambrane protein OmpA [Bacteroides vulgatus] Length = 357 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 21/145 (14%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + I + + + + + + + + I F + PE +V +Q + Sbjct: 228 KEVIKEVIREVPKEVVKEVIKEVPSAAEVAI---------FFKIGKAKISPEGMVNVQLM 278 Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + + + I G D A N LS RA + Y L+ GV E ++ K++ Sbjct: 279 AKAIKANPNAKYKIAGFAD--KATGSASFNQTLSEKRAQAVYDALVAEGVKESQLEKVA- 335 Query: 315 FAHHRLKIASDPMNSAN--RRIDIL 337 D M N R+ IL Sbjct: 336 MGGT------DNMFGKNYLNRVVIL 354 >gi|90578276|ref|ZP_01234087.1| probable peptidoglycan-associated lipoprotein precursor [Vibrio angustum S14] gi|90441362|gb|EAS66542.1| probable peptidoglycan-associated lipoprotein precursor [Vibrio angustum S14] Length = 174 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 5/147 (3%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 +S ++ G +I FD L + Sbjct: 19 CVSDRAIYADYGDLACGTTVIEAPAPAIIPSDQWPVAVYFDFDKHDLQMSEQSQLDLASK 78 Query: 258 VLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 +L+ + + G D+ A+ N L+L RA G+ R+ +S + Sbjct: 79 ILSDNPRYRVAVIGSADSM---GGAKYNDNLALKRAKVVADYFFSKGIDRSRMVTLSSGS 135 Query: 317 HHRLKIASDPMNSA-NRRIDILVEDRQ 342 + ++ D + NRR +++ Sbjct: 136 REQFIVSKDREVNRVNRRAQLILLGAN 162 >gi|146298626|ref|YP_001193217.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146153044|gb|ABQ03898.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 376 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 60/151 (39%), Gaps = 5/151 (3%) Query: 191 RLQDLAKKISST-LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 R+ DL +I + +V + V + + I D+ + FD + + P+ + Sbjct: 229 RIADLENQIKNIPSKQVVVEKPVNNTTVVNDKDVVKELINDKYYSVYFDFNKATPIENST 288 Query: 250 VVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + + L + I G+ D A N +LS RA + + K+G++ R Sbjct: 289 AAIDVVLTYLRKNPSASLDIIGYADQV---GKAEYNEKLSNQRAENVKTIFEKAGIASSR 345 Query: 309 ISKISGFAHHRLKIASDPMNSANRRIDILVE 339 ++ I A ++ S+ RR+ V+ Sbjct: 346 LNVIPAGADTSIQKDSEEARRLARRVTFKVK 376 >gi|154490277|ref|ZP_02030538.1| hypothetical protein PARMER_00509 [Parabacteroides merdae ATCC 43184] gi|154089169|gb|EDN88213.1| hypothetical protein PARMER_00509 [Parabacteroides merdae ATCC 43184] Length = 386 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 10/150 (6%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 L DL +I++ + + E + N F +S+ Sbjct: 241 ALLNDLNGQINALRAENDELSKRPVSCPECEEVVTNVVNNYVDNVVYFRINSAKIDKNQQ 300 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDR 308 V + + + + I + G+ D N +LS RA + + L+ K G+S + Sbjct: 301 VSIFNTAQFMKENNVPIKVIGYADKKTGTGS--YNMQLSEKRARAVAKELIDKYGISSSQ 358 Query: 309 ISKISGFAHH-RLKIASDPMNSANRRIDIL 337 I I + ++ R+ I+ Sbjct: 359 I-TIEWKGSDVQPYNENNWN-----RVVIM 382 >gi|332291797|ref|YP_004430406.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332169883|gb|AEE19138.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 292 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 11/113 (9%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR----- 286 +F + S ++ L+K+ + L E+ I+GH N + Sbjct: 176 KNILFKTNYSYIHGKSYNDLKKLAKYLKEHPEIIFKIQGHVCCV-DHGRDGINLKTGKRN 234 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 LS RA Y L GV++ R+ + GF DP R++I V Sbjct: 235 LSEARAKFIYDYLADQGVAKKRM-RYQGFGSRFPL-GGDPSEDK--RVEIYVT 283 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 8/118 (6%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLS 288 D+ + FD S + + L + L E ISI G+ D N RLS Sbjct: 23 DRTHETFFDTDKSALIKTELASLNRFIASLPKDKIEDISIYGYCDDR---GTDAYNKRLS 79 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAH---HRLKIASDP-MNSANRRIDILVEDRQ 342 DRA + + M GV++ I G RL A NR+++I+V +Q Sbjct: 80 QDRANTIKDIFMLQGVADTIIKNSDGKGELLLTRLDDAGSEIQRKLNRKVEIIVSLKQ 137 >gi|328676839|gb|AEB27709.1| Outer membrane protein A precursor [Francisella cf. novicida Fx1] Length = 392 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 3/101 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + + + + + ++++G+ + N +LS RA + Sbjct: 282 FAYDKATLNAKGKKAIASFVNFIKDSNIGSVTVKGYASQGQTSSEFDIYNQKLSEKRAQA 341 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + G+ ++I GF + + N+R++ Sbjct: 342 VADYMKQLGLDSEKIIT-KGFGYDDTLGGIPKSDPRNQRVE 381 >gi|301162664|emb|CBW22211.1| putative outer membrane protein [Bacteroides fragilis 638R] Length = 366 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 4/140 (2%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++ + L ++S S L + T+ + + F Sbjct: 214 GAQVDQNAINEELNRYRSELSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQI 273 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S +V +Q ++L + + I G+ D A+ N +LS RA + Y Sbjct: 274 GKSKIDDYGMVNIQLAAKILKANPDKKYKIAGYAD--KATGSAKWNQKLSEARAQAVYDA 331 Query: 299 LMKSGVSEDRISKISGFAHH 318 L+K GVS+D++ + GF Sbjct: 332 LIKEGVSKDQLELV-GFGGT 350 >gi|265763060|ref|ZP_06091628.1| outer membrane porin F [Bacteroides sp. 2_1_16] gi|263255668|gb|EEZ27014.1| outer membrane porin F [Bacteroides sp. 2_1_16] Length = 373 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 4/140 (2%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++ + L ++S S L + T+ + + F Sbjct: 221 GAQVDQNAINEELNRYRSELSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQI 280 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S +V +Q ++L + + I G+ D A+ N +LS RA + Y Sbjct: 281 GKSKIDDYGMVNIQLAAKILKANPDKKYKIAGYAD--KATGSAKWNQKLSEARAQAVYDA 338 Query: 299 LMKSGVSEDRISKISGFAHH 318 L+K GVS+D++ + GF Sbjct: 339 LIKEGVSKDQLELV-GFGGT 357 >gi|253563059|ref|ZP_04840516.1| outer membrane porin F [Bacteroides sp. 3_2_5] gi|251946835|gb|EES87117.1| outer membrane porin F [Bacteroides sp. 3_2_5] Length = 373 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 4/140 (2%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++ + L ++S S L + T+ + + F Sbjct: 221 GAQVDQNAINEELNRYRSELSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQI 280 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S +V +Q ++L + + I G+ D A+ N +LS RA + Y Sbjct: 281 GKSKIDDYGMVNIQLAAKILKANPDKKYKIAGYAD--KATGSAKWNQKLSEARAQAVYDA 338 Query: 299 LMKSGVSEDRISKISGFAHH 318 L+K GVS+D++ + GF Sbjct: 339 LIKEGVSKDQLELV-GFGGT 357 >gi|53712963|ref|YP_098955.1| outer membrane porin F [Bacteroides fragilis YCH46] gi|52215828|dbj|BAD48421.1| outer membrane porin F precursor [Bacteroides fragilis YCH46] Length = 373 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 4/140 (2%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++ + L ++S S L + T+ + + F Sbjct: 221 GAQVDQNAINEELNRYRSELSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQI 280 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S +V +Q ++L + + I G+ D A+ N +LS RA + Y Sbjct: 281 GKSKIDDYGMVNIQLAAKILKANPDKKYKIAGYAD--KATGSAKWNQKLSEARAQAVYDA 338 Query: 299 LMKSGVSEDRISKISGFAHH 318 L+K GVS+D++ + GF Sbjct: 339 LIKEGVSKDQLELV-GFGGT 357 >gi|255690559|ref|ZP_05414234.1| major outer membrane protein OmpA [Bacteroides finegoldii DSM 17565] gi|260624020|gb|EEX46891.1| major outer membrane protein OmpA [Bacteroides finegoldii DSM 17565] Length = 395 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHT 272 V E T ++ T F S P+ + L + + S I G+ Sbjct: 274 PVEIEDTEEVVIADTNIAPRTVFFKIGSDKLSPQEEMNLSYLANKIKESPNTTYTINGYA 333 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316 D+ N +LSL+RA +L+K G+S DR+ +G Sbjct: 334 DS--ATGTPAFNQKLSLERAQVVKDLLVKKYGISADRLKVAAGGG 376 >gi|228470936|ref|ZP_04055781.1| outer membrane protein 40 [Porphyromonas uenonis 60-3] gi|228307333|gb|EEK16347.1| outer membrane protein 40 [Porphyromonas uenonis 60-3] Length = 388 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 10/108 (9%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 N F S+ ++ + E + I I G+ D A+ N LS R Sbjct: 286 ENVVAFRIGSAKIDKNQMINVYNSAEAAKANGGKIYIVGYADEQ--TGNAKINMSLSQRR 343 Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDIL 337 A + + L+ K GV+ D I I + ++ R+ I+ Sbjct: 344 AEAVKKALVNKYGVNPDNIV-IDYKGDTVQPFATNEWN-----RVAII 385 >gi|254374174|ref|ZP_04989656.1| outer membrane associated protein [Francisella novicida GA99-3548] gi|151571894|gb|EDN37548.1| outer membrane associated protein [Francisella novicida GA99-3548] Length = 393 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 3/101 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F + + + + + ++++G+ + N +LS RA + Sbjct: 283 FAYDKATLNAKGKKAIASFVNFIKDSNIGSVTVKGYASQGQTSSEFDIYNQKLSEKRAQA 342 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 + + G+ ++I GF + + N+R++ Sbjct: 343 VADYMKQLGLDSEKIIT-KGFGYDDTLGGIPKSDPRNQRVE 382 >gi|39997270|ref|NP_953221.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA] gi|39984160|gb|AAR35548.1| OmpA domain protein, putative [Geobacter sulfurreducens PCA] Length = 199 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 42/133 (31%), Gaps = 10/133 (7%) Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 + + T I Q + FD S + + L + ++ Sbjct: 75 QLALETKPVQSSTHGAIETEIQLTSVQFDFDSEQLSRHERLRFDGLLAGLTKQ-GMFGLK 133 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 G+T N RLS+ RA ++ +G + + + G Sbjct: 134 GYTCTI---GTDDYNERLSIRRANHVAGIMKSNGFN---VVTVEGKGKCCPV---STDKR 184 Query: 330 ANRRIDILVEDRQ 342 NRR++I+ ++ Sbjct: 185 LNRRVEIVEHRKE 197 >gi|86130223|ref|ZP_01048823.1| type VI secretion system OmpA/MotB family protein [Dokdonia donghaensis MED134] gi|85818898|gb|EAQ40057.1| type VI secretion system OmpA/MotB family protein [Dokdonia donghaensis MED134] Length = 228 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 7/83 (8%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHH 318 + + ++I GHTD ARDN+ L ++ L + G+ +I+ S Sbjct: 150 NNPDKKVTILGHTDNV---GNARDNFSTGLKKSRQIKWYLTARRGIPRSKITATS-RGEE 205 Query: 319 RLKIASDP--MNSANRRIDILVE 339 +++ N RI+I+V+ Sbjct: 206 EPIASNNTVSGRRQNNRIEIIVD 228 >gi|255014570|ref|ZP_05286696.1| hypothetical protein B2_11729 [Bacteroides sp. 2_1_7] gi|293373684|ref|ZP_06620031.1| chemotaxis protein MotB family protein [Bacteroides ovatus SD CMC 3f] gi|292631339|gb|EFF49970.1| chemotaxis protein MotB family protein [Bacteroides ovatus SD CMC 3f] Length = 231 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 69/212 (32%), Gaps = 19/212 (8%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 K + ++ + DL S+ L + ++ + + +I + L Sbjct: 4 KRTEYESKDENAFALSTGDLMASLLFIFILLLMGALLQVQEKAEQDEEIVKRYDQIKTQL 63 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG------- 256 + + + I Q + +FD+ S+ P+ +L Sbjct: 64 YIDLQQEFKDDLAVWRATIDSTLCIRFQEPSMLFDEGQSLLKPKFKNILDDFFPRYIAVL 123 Query: 257 --EVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV---LMKSGVSE--DRI 309 + + E I I GHT++ N LS DR + Q LM + E + Sbjct: 124 SRDEYRDNIEEIRIEGHTNS---NGGYYSNMELSQDRTRAVLQYCFSLMSDDLEEWLKGL 180 Query: 310 SKISGFAHHRLKIASDPMNSAN--RRIDILVE 339 +G + L + + + RR++ V Sbjct: 181 VTANGLSSSHLILKMNGEEDKDLSRRVEFRVR 212 >gi|209549648|ref|YP_002281565.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535404|gb|ACI55339.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 742 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285 +T F S+ L+K+ + + +E I GHTDA + N Sbjct: 621 DLDTITFATGSADIPMTQARTLRKVADAISQVLKKDPSETFLIEGHTDAV---GTDQSNL 677 Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA S VL G+ + + G+ LK+ + NRR+ + Sbjct: 678 VLSDQRAESVANVLSDVYGIPPENL-ATQGYGEQYLKVNTSGPEQENRRVTV 728 >gi|148244623|ref|YP_001219317.1| peptidoglycan-associated lipoprotein [Candidatus Vesicomyosocius okutanii HA] gi|146326450|dbj|BAF61593.1| peptidoglycan-associated lipoprotein [Candidatus Vesicomyosocius okutanii HA] Length = 189 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 8/111 (7%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 D F + +I + K + ++ + + GHTD N L Sbjct: 82 DVNFILYFSDDGTEINKTSIKQIIKHANFMRNNPTLKLRLEGHTDER---GTREYNLALG 138 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 +RA + ++L +S RI ++ F + + NRR++ + Sbjct: 139 ENRALNVKEILGLYDLS-SRI-EVISFGEEKPMTQQHDEDAWQKNRRVEFV 187 >gi|187921515|ref|YP_001890547.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans PsJN] gi|187719953|gb|ACD21176.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 362 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 82/287 (28%), Gaps = 23/287 (8%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 +A Q + + A + +++ I L ++ + L+ ST + Sbjct: 84 FRAKAQCWINAAQQARQAGDHWGFVEEAVGQAAMITISLENGTSLSAVNSALRTVSTVRP 143 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 L + + C + + +L ++ + + P +++ Sbjct: 144 D----LWKIANTIKSDPAIAQCPQAQPPLACAEVELMQAGHEAWRRSFSDAEERLPDAQD 199 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 K+ +I + V+ V + I++ Sbjct: 200 KLRQSAETALQCKQKVQIPVSAPVPVSA----PVTVAAANSPRKITLKADSLFSFNGGDD 255 Query: 242 SIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 + LP + ++ L + I G+ D N LS+ RA + + L Sbjct: 256 AAILPAGKRQMNEVAVRLKKLPSVHELKITGYADRL---GDKSYNQGLSMQRARTVERYL 312 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILV 338 GVS G + + NRR++I + Sbjct: 313 QSLGVSLP--MTAQGRGSANPLVDCRQSKGDVLTRCLAPNRRVEIEL 357 >gi|294140610|ref|YP_003556588.1| OmpA family protein [Shewanella violacea DSS12] gi|293327079|dbj|BAJ01810.1| OmpA family protein [Shewanella violacea DSS12] Length = 252 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 55/178 (30%), Gaps = 20/178 (11%) Query: 164 EKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTG 223 + + + + L + L + + L ++ + S L + + G Sbjct: 77 DDTEMESQQLKLTEQASTINLLNEDNQSLAIISNQYESLQDELTELRLARQQKLTELELG 136 Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 + I F SS L ++ VL S + + + G+ D + Sbjct: 137 LNIQ---------FKTGSSQLETHFQPQLDELASVLRISNDLRLDLMGYADRR---GEST 184 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN----RRIDI 336 N LS R L+ GV E ++ S + A N RR+ I Sbjct: 185 YNQALSEQRVAEVKSYLLTKGVDEKKL-AASAYGASAPLTAEQSFE--NDFFDRRVTI 239 >gi|312114255|ref|YP_004011851.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] gi|311219384|gb|ADP70752.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 213 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 5/72 (6%) Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIAS 324 I GHTDA N LS RA + L V+ +R+ G LK Sbjct: 126 FMIIGHTDAR---GGDGYNLGLSQRRANAVAARLRDFHAVAANRLVA-EGRGMRELKDPV 181 Query: 325 DPMNSANRRIDI 336 P+ NRR+ I Sbjct: 182 RPLGGINRRVQI 193 >gi|152982739|ref|YP_001354366.1| OmpA family protein [Janthinobacterium sp. Marseille] gi|151282816|gb|ABR91226.1| OmpA family protein [Janthinobacterium sp. Marseille] Length = 222 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 14/78 (17%) Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD 325 ++I G+TD AR N LS RA + L K GV+ + K++G + D Sbjct: 141 MTITGYTD---LLGNARSNQALSEKRAAAVADYLKKKGVTVN--MKVTGVGASQPVKDCD 195 Query: 326 PMNSA---------NRRI 334 + NRR+ Sbjct: 196 SKLNRTKLVACLAPNRRV 213 >gi|313149586|ref|ZP_07811779.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313138353|gb|EFR55713.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 395 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 6/146 (4%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P +I ++++ ++A S LV +I Sbjct: 234 ARPMPQIISEIELANMRRQMNEMAAANQSLQQQLVDAQNQPVAEVAEQVVVTDANI--AP 291 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T F SS P + L + + + ++ G+ D+ N LS R Sbjct: 292 RTVFFTIGSSELSPREEMNLSYLAAKMKEFPDTQYTVYGYADS--ATGTPAFNKELSQKR 349 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFA 316 A + L+K GV R+ +G Sbjct: 350 AQAVVNALVKKYGVDSSRLKVDAGGG 375 >gi|294784302|ref|ZP_06749596.1| outer membrane protein [Fusobacterium sp. 3_1_27] gi|294488058|gb|EFG35410.1| outer membrane protein [Fusobacterium sp. 3_1_27] Length = 71 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 RA S L++ G+SEDRI I + + + NRR++ + R+ Sbjct: 2 RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKLVQRE 56 >gi|223041430|ref|ZP_03611633.1| lipoprotein Plp4 [Actinobacillus minor 202] gi|223017688|gb|EEF16095.1| lipoprotein Plp4 [Actinobacillus minor 202] Length = 294 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 13/113 (11%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + +FD E + + + + L + I + G+TD N LS Sbjct: 138 NSDFLFDFDKDSLTAEGVRTVNALADKLKSLPVKSIVVEGYTDRM---GTVEYNLDLSQR 194 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSA-----NRRIDI 336 RA + L + GV+ + ++ + G+ + + NRR+ + Sbjct: 195 RANTVKAELQRLGVTTE-LNAV-GYGKANQVKHCDGNDQAAKDCLRPNRRVVV 245 >gi|163745061|ref|ZP_02152421.1| OmpA domain protein [Oceanibulbus indolifex HEL-45] gi|161381879|gb|EDQ06288.1| OmpA domain protein [Oceanibulbus indolifex HEL-45] Length = 519 Score = 63.1 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 50/165 (30%), Gaps = 12/165 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + +++ A I + + + + S F+ Sbjct: 362 DQTPEEIPVEEQGNRFANAIITAGIETPLGELQRMTATLVPMARLTTSFR-------FEA 414 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S ++ +Q++ L S AR N ++L RA + + + Sbjct: 415 GSIRLDAQSRSNVQQLARALEQGQYDARRLMFVGFSDGEGAARANREIALRRAEAVQRAV 474 Query: 300 MKSGVSE--DRI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + V+ RI ++ F D NRR+++ V Sbjct: 475 SAAAVTANLSRIDLRVDAFGEAMPIACDDSEWGRQANRRVEVWVR 519 >gi|297184084|gb|ADI20203.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 863 Score = 63.1 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 35/147 (23%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDN 284 I + FD + S E+ V L + +L + + +R HTD +R+ N Sbjct: 589 IEVPIVLPNVFFDLAQSELREESKVALDTVFSILQRNPTITIGLRSHTD---YRDTDAKN 645 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----------------ASDPM- 327 LS RA S L++ G++ +R++ + G + + Sbjct: 646 DVLSQARAQSCVDYLIQKGITAERLTAV-GMGEKEPFVISTEYKGYGVDKFKAGDNLTET 704 Query: 328 -------------NSANRRIDILVEDR 341 N NRR D V Sbjct: 705 FIKRLNKEDQEIANQINRRTDFKVLSD 731 >gi|255011749|ref|ZP_05283875.1| putative major outer membrane protein [Bacteroides fragilis 3_1_12] Length = 390 Score = 63.1 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 6/146 (4%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P +I ++++ ++A S LV +I Sbjct: 229 ARPMPQIISEIELANMRRQMNEMAAANQSLQQQLVDAQNQPVAEVAEQVVVTDANI--AP 286 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 T F SS P + L + + + ++ G+ D+ N LS R Sbjct: 287 RTVFFTIGSSELSPREEMNLSYLAAKMKEFPDTQYTVYGYADS--ATGTPAFNKELSQKR 344 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFA 316 A + L+K GV R+ +G Sbjct: 345 AQAVVNALVKKYGVDSSRLKVDAGGG 370 >gi|157367360|gb|ABV45540.1| outer membrane protein 18 [Helicobacter pylori] Length = 179 Score = 63.1 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 6/110 (5%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + FD L +I + + + + G+TD + N Sbjct: 67 IESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQ 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 L + R S L+ GV +D I IS F + K A NRR Sbjct: 124 ALGVKRTLSVKNALVIKGVEKDMIKTIS-FGETKPKCAQKTRECYKENRR 172 >gi|75907103|ref|YP_321399.1| OmpA/MotB protein [Anabaena variabilis ATCC 29413] gi|75700828|gb|ABA20504.1| OmpA/MotB [Anabaena variabilis ATCC 29413] Length = 597 Score = 63.1 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 15/119 (12%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA---------HSTEVISIRGHTDASPFRNIA 281 +R F + S +P + L + + I I GHT+ + Sbjct: 474 ERAIVFFPEGSQEIIPSELSKLNNLALAVKKLLAVAKYLEKDVYIQIIGHTNTT---GTE 530 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 N +LS R+ L G+S ++ ++ G + + NRR+ V Sbjct: 531 SRNAQLSEGRSQRVLSYLSSQGISTSQL-QVLGVSSSQPLQPELTDEGKKFNRRVSFKV 588 >gi|297192373|ref|ZP_06909771.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486] gi|197723026|gb|EDY66934.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486] Length = 203 Score = 63.1 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 6/108 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + +F K S+ E + I + + + I + G TD +LS + Sbjct: 94 QAEVLFGKDSAELSGEATSRISAIAVEIKNQNAKKIRVFGFTDDL---GTEAHGDKLSKE 150 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 RA + + VL + +E +I G+ ++ NRR+++ Sbjct: 151 RADAVHSVLAQQLSAEGITYEIRGYGEDYPIASNTSEEGRRKNRRVEV 198 >gi|150396796|ref|YP_001327263.1| OmpA/MotB domain-containing protein [Sinorhizobium medicae WSM419] gi|150028311|gb|ABR60428.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419] Length = 720 Score = 63.1 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285 +T F S+ ++K+ E + E I GHTDA + N Sbjct: 600 DLDTITFATGSAEVSMSQAKTMRKVAEAMNKVLEKDPGETFFIEGHTDAV---GADQSNL 656 Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS +RA S +L + GV + + G+ LKI +D NRR+ I Sbjct: 657 VLSDERAESVAVLLTEVYGVPAENLVT-QGYGERFLKIRTDGPEQENRRVTI 707 >gi|167626342|ref|YP_001676842.1| outer membrane associated protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596343|gb|ABZ86341.1| outer membrane associated protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 390 Score = 63.1 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 3/100 (3%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIAR-DNWRLSLDRAYS 294 F S+ + + + +S + ++++G+ + N +LS RA + Sbjct: 280 FAYDSANLNSKGKEAIASFVNFVKNSDIKTVTVKGYASQGATGSEFEIYNQKLSERRAEA 339 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 + + G+ D+I GF + ++ N+R+ Sbjct: 340 VADYMNQLGLDNDKIIT-KGFGYENTLDGIHKSDARNQRV 378 >gi|56416952|ref|YP_154026.1| hypothetical protein AM854 [Anaplasma marginale str. St. Maries] gi|254995132|ref|ZP_05277322.1| hypothetical protein AmarM_03987 [Anaplasma marginale str. Mississippi] gi|255003301|ref|ZP_05278265.1| hypothetical protein AmarPR_03517 [Anaplasma marginale str. Puerto Rico] gi|255004426|ref|ZP_05279227.1| hypothetical protein AmarV_03742 [Anaplasma marginale str. Virginia] gi|56388184|gb|AAV86771.1| hypothetical protein AM854 [Anaplasma marginale str. St. Maries] gi|295243859|gb|ADF87315.1| peptidoglycan-associated lipoprotein precursor [Anaplasma marginale] Length = 236 Score = 63.1 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289 + FD + VL + E + + I GHTD+ N L Sbjct: 40 RVEKVYFDFNKYEIKGSGKKVLLGLVERMKADKRSTLLIIGHTDSR---GTEEYNLALGE 96 Query: 290 DRAYSAYQVLM--KSGVSEDRISKISGFAHHR-LKIASD-----PMNSANRRIDILVE 339 RA + + ++ +S ++ G A L +SD ++ NRR+ ++VE Sbjct: 97 RRANAVKEFILGCDRSLSPRISTQSRGKAEPEVLVYSSDFKEAEKAHAQNRRVVLIVE 154 >gi|302037752|ref|YP_003798074.1| putative peptidoglycan-associated lipoprotein [Candidatus Nitrospira defluvii] gi|300605816|emb|CBK42149.1| putative Peptidoglycan-associated lipoprotein precursor [Candidatus Nitrospira defluvii] Length = 192 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRA 292 +FD + + + ++ + L + + + G D + N L RA Sbjct: 87 DVLFDFDQYVLRDDALTAVEANAKRLKDNRITKVLLEGRCDEV---GTSEYNLVLGERRA 143 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVED 340 S + L G+++ ++ ++ + R + NR + +V++ Sbjct: 144 LSVKRYLESLGINQLQVD-VTSYGKDRPLCLQHNPVCWQKNRSVHFVVKE 192 >gi|256828231|ref|YP_003156959.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256577407|gb|ACU88543.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028] Length = 585 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 38/108 (35%), Gaps = 11/108 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ + + L +I ++ I + G++D+ N +S RA Sbjct: 484 FETGNLSLDEQGGRDLARIVAMMKEPKNSGKTIVLVGYSDSV---GAYASNLAVSRKRAE 540 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILVE 339 + + K G+ + + +D NRR++I ++ Sbjct: 541 AVAEAFRKRGLQDVVVLAA---GEEGAIERNDIRAGREKNRRVEIWLK 585 >gi|239833809|ref|ZP_04682137.1| OmpA/MotB domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239821872|gb|EEQ93441.1| OmpA/MotB domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 765 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 10/106 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 F S+ L+K+ + E I GHTDA R N LS R Sbjct: 651 FATGSAEVSMSQAKTLRKVATAMQKVLAKDPGETFFIEGHTDAV---GSDRSNLVLSDKR 707 Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 A S +L + + + + G+ LKI + NRR+ I Sbjct: 708 AESVASLLTEVYDIPAENLVT-QGYGERFLKIRTQAAEQENRRVTI 752 >gi|332308253|ref|YP_004436104.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175582|gb|AEE24836.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 266 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 24/214 (11%), Positives = 56/214 (26%), Gaps = 10/214 (4%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 T+++ + + N + + S + + Sbjct: 26 TQSTEPAETKTQNDLVGFGSGALLGSAVGGPVGGVIGGIMGLFISNDVNNDNALAQAKSE 85 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + + + L L ++ + ++++ + I Sbjct: 86 LKETKLQLLALQRGADALTPAGQQAEHKIRSYQTASIENPDRTAPQSTAAINSHAAITPI 145 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW 285 Q F S + L I ++ + I++ G+ D + N Sbjct: 146 ETNIQ-----FRTGSHLVEGHYHRQLDLIAALIRQYPDLHITLAGYADER---GDSNYNQ 197 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 LS RA S + L K V ++ F + Sbjct: 198 ALSQQRAISVKRYLTKQQVPTAQLHT-ESFGETK 230 >gi|330966673|gb|EGH66933.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. actinidiae str. M302091] Length = 301 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 6/90 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L + L V I GH+D N LS RA + Sbjct: 178 FPGGGIELDANAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 G+ E +I + + Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLAPN 263 >gi|257464878|ref|ZP_05629249.1| Plp4 [Actinobacillus minor 202] gi|257450538|gb|EEV24581.1| Plp4 [Actinobacillus minor 202] Length = 255 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 13/133 (9%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDA 274 + D +FD SS+ E + I L I+++G TD Sbjct: 128 WLPVDCLKAENKVFDLSADVLFDFDSSVLTEEGKREVSNIALKLRQQQATNITVKGWTDR 187 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI-ASDPMNSA--- 330 N LS RA + L+ +G++ K G L ++ Sbjct: 188 L---GSDSYNLNLSQLRAEAVKTELLNNGLNIS--IKAQGKGKLDLVACHNEDYEELKQC 242 Query: 331 ---NRRIDILVED 340 NR++++LV D Sbjct: 243 LKPNRKVEVLVND 255 >gi|325851839|ref|ZP_08171004.1| OmpA family protein [Prevotella denticola CRIS 18C-A] gi|327312557|ref|YP_004327994.1| OmpA family protein [Prevotella denticola F0289] gi|325484681|gb|EGC87594.1| OmpA family protein [Prevotella denticola CRIS 18C-A] gi|326945377|gb|AEA21262.1| OmpA family protein [Prevotella denticola F0289] Length = 382 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 17/165 (10%) Query: 182 KILAMKRKKRLQDLAKKIS--STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + L L K+ + + D + ETT + +++ + F+ Sbjct: 229 DAINAQHQAALDALNAKLRDSEAENARLRDQLANQKPVETTSESVK-QLVNTPVSVFFNI 287 Query: 240 S-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + S+I + +V +Q + + + + + G+ D+ N +LS RA + Sbjct: 288 NKSTIASQKDLVNVQALAKYAKDNNNSLLVTGYADS--ATGTPAYNQKLSERRANTVANE 345 Query: 299 LMKSGVSEDRISKISGFA--HH-RLKIASDPMNSANRRIDILVED 340 L+K GV ++I+ + G S NRR + V + Sbjct: 346 LVKMGVENNKITAV-GKGGVETLSPI-------SFNRRATVQVTE 382 >gi|222081460|ref|YP_002540823.1| hypothetical protein Arad_7805 [Agrobacterium radiobacter K84] gi|221726139|gb|ACM29228.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 199 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 8/105 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S P + L I + L H I GH A+ + N+ LS RA Sbjct: 90 FQNDSVAIEPRSYRTLGLIADALHHPNLWAYKFLIVGHASAT---GGDKHNFELSSKRAD 146 Query: 294 SAYQVL-MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + + L V +R+ + G + A+ + NRR+ + Sbjct: 147 AIKEALATTFAVDSERLYAV-GVGEYFPIDAAKADAADNRRVQLF 190 >gi|212219329|ref|YP_002306116.1| IcmN protein, OmpA family [Coxiella burnetii CbuK_Q154] gi|212013591|gb|ACJ20971.1| IcmN protein, OmpA family [Coxiella burnetii CbuK_Q154] Length = 212 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S+ + L+ + ++ + + + +TD L+ +A Sbjct: 101 LFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDN---NGHIERQQALTTRQAQV 157 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L G++ R++ G+ + + NRR++I Sbjct: 158 VASFLWSRGINA-RLAYAVGYNRKNPVDYNGSSHGRFNNRRVEI 200 >gi|209363772|ref|YP_001423789.2| IcmN protein, OmpA family [Coxiella burnetii Dugway 5J108-111] gi|212212032|ref|YP_002302968.1| IcmN protein, OmpA family [Coxiella burnetii CbuG_Q212] gi|207081705|gb|ABS76937.2| IcmN protein, OmpA family [Coxiella burnetii Dugway 5J108-111] gi|212010442|gb|ACJ17823.1| IcmN protein, OmpA family [Coxiella burnetii CbuG_Q212] Length = 212 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S+ + L+ + ++ + + + +TD L+ +A Sbjct: 101 LFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDN---NGHIERQQALTTRQAQV 157 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L G++ R++ G+ + + NRR++I Sbjct: 158 VASFLWSRGINA-RLAYAVGYNRKNPVDYNGSSHGRFNNRRVEI 200 >gi|215919216|ref|NP_820613.2| ompA family protein [Coxiella burnetii RSA 493] gi|206584100|gb|AAO91127.2| IcmN protein, OmpA family [Coxiella burnetii RSA 493] Length = 212 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S+ + L+ + ++ + + + +TD L+ +A Sbjct: 101 LFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDN---NGHIERQQALTTRQAQV 157 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L G++ R++ G+ + + NRR++I Sbjct: 158 VASFLWSRGINA-RLAYAVGYNRKNPVDYNGSSHGRFNNRRVEI 200 >gi|161830197|ref|YP_001597454.1| ompA family protein [Coxiella burnetii RSA 331] gi|164685809|ref|ZP_01945857.2| ompA family protein [Coxiella burnetii 'MSU Goat Q177'] gi|165919482|ref|ZP_02219502.1| ompA family protein [Coxiella burnetii RSA 334] gi|161762064|gb|ABX77706.1| ompA family protein [Coxiella burnetii RSA 331] gi|164601325|gb|EAX33525.2| ompA family protein [Coxiella burnetii 'MSU Goat Q177'] gi|165916897|gb|EDR35501.1| ompA family protein [Coxiella burnetii RSA 334] Length = 170 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F S+ + L+ + ++ + + + +TD L+ +A Sbjct: 59 LFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDN---NGHIERQQALTTRQAQV 115 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDI 336 L G++ R++ G+ + + NRR++I Sbjct: 116 VASFLWSRGINA-RLAYAVGYNRKNPVDYNGSSHGRFNNRRVEI 158 >gi|125491378|gb|ABN43176.1| putative outer membrane protein A [Bordetella petrii] Length = 137 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L ++ + + I GHTD+ N +LS RA S Sbjct: 62 FFDFDKSTLKPEGRQLLDQVAQQASGIDLETIIAVGHTDSI---GTEAYNQKLSERRAAS 118 Query: 295 AYQVLMKSGVSED 307 L+ GV Sbjct: 119 VKSYLVSKGVDPT 131 >gi|289640922|ref|ZP_06473092.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata] gi|289509237|gb|EFD30166.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata] Length = 394 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 6/102 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F SS V L +I VL S + + GH DA N LSL RA +A Sbjct: 292 FATDSSELTEADRVHLDRIAAVLRESELSVLLAGHADAR---GPGVLNETLSLARARAAA 348 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 L GVS D + + +GFA + +ANRR++I Sbjct: 349 AYLADQGVSADHL-RAAGFASEHPVATNATEAGRAANRRVEI 389 >gi|317153138|ref|YP_004121186.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943389|gb|ADU62440.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 244 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 57/181 (31%), Gaps = 20/181 (11%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-------- 230 S++ + L L I S A+ + V + Sbjct: 63 SQQSADEAQAASALDPLIGLIGQLSSRAGANGSQETVRVADNQVLFRSRTDGVTVVREGQ 122 Query: 231 ------QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 R F + + PE+ L +I EV+ S + + G+ N A Sbjct: 123 GRIRVTLRGDLFFAVNEAGLAPESGQYLSEIAEVVRLSVGTVHVIGYASEDEGGNEAGTR 182 Query: 285 W--RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 LS RA LM V R+ I+G ++ + NRR++I++ Sbjct: 183 QGFALSTGRATEVADQLMTRFKVDPRRVV-ITGRGRLHPELPGTTPANQAMNRRVEIVIT 241 Query: 340 D 340 + Sbjct: 242 N 242 Score = 43.4 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 21/175 (12%), Positives = 58/175 (33%), Gaps = 6/175 (3%) Query: 29 NLGSWKIVYADFMTVLMAFFLVMWIINATDDDTK----KAIEQYFNPFGKNLMTASKGIF 84 +W + +AD M V+ F+V++I ++T D K + Sbjct: 26 GANAWAVPWADLMMVMFVLFVVLFIYSSTHQDVKVLFSQQSADEAQAASALDPLIGLIGQ 85 Query: 85 DEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL--ENNIFYLSNSQQSEH 142 SQ + ++ ++ + ++ D + + + + F ++ + + Sbjct: 86 LSSRAGANGSQETVRVADNQVLFRSRTDGVTVVREGQGRIRVTLRGDLFFAVNEAGLAPE 145 Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 L+ +E + + + +++E + L+ R + D Sbjct: 146 SGQYLSEIAEVVRLSVGTVHVIGYASEDEGGNEAGTRQGFALSTGRATEVADQLM 200 >gi|146301157|ref|YP_001195748.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146155575|gb|ABQ06429.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 420 Score = 62.7 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 55/169 (32%), Gaps = 8/169 (4%) Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 L P + + + + + + L + K T + I Sbjct: 257 DLEPNTIAGVAVNTKGQSIDTNQNGVPDELESYLDKTYEKKGSGTATNNTVEELINGGYV 316 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292 FD +SS P ++ + + + L ++ I G+ D N LS RA Sbjct: 317 NVYFDFNSSKPTNASLSGVDFLVKYLKNNPGKSADIIGYADEI---GKTSYNTELSRKRA 373 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RRIDILVE 339 + +V + +G+ R++ + + + RR+ V+ Sbjct: 374 EAVKKVAVNAGIDASRLN-VIANGEDTSVNKN-SKEARQIVRRVTFQVK 420 >gi|330877334|gb|EGH11483.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 301 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 6/90 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L + L V I GH+D N LS RA + Sbjct: 178 FPGGGIELDANAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 G+ E +I + + Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLAPN 263 >gi|281423558|ref|ZP_06254471.1| putative peptidoglycan-associated lipoprotein [Prevotella oris F0302] gi|281402378|gb|EFB33209.1| putative peptidoglycan-associated lipoprotein [Prevotella oris F0302] Length = 425 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 63/203 (31%), Gaps = 13/203 (6%) Query: 134 LSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQ 193 L + + + N L K + +P + + +++ Sbjct: 230 LDHIPEQGYKTNLLRETGLKLTYSVGKKVKRTEALQPSEPNMPEVDDLHVQPERKEDNEP 289 Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 ++ K + V V + + T F +S+ + +Q Sbjct: 290 EMTKVTEQIEQSKTTERSVSEVSVAAAESVATVDFP----TVYFAFNSARISSKEETKMQ 345 Query: 254 KIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 +I +L + + I + G D N RLS+ RA + L G++ RI Sbjct: 346 QILHLLQDNPKLNIIVTGWCDTV---GSDAVNLRLSVRRAKALKTWLTTRGINAVRIKTA 402 Query: 313 SGFAHHRLKIASDPMNSANRRID 335 G + ++ + RR + Sbjct: 403 -GKG----RDFNEKNAAKARRSE 420 >gi|255008463|ref|ZP_05280589.1| outer membrane porin F precursor [Bacteroides fragilis 3_1_12] gi|313146191|ref|ZP_07808384.1| major outer membrane protein OmpA [Bacteroides fragilis 3_1_12] gi|313134958|gb|EFR52318.1| major outer membrane protein OmpA [Bacteroides fragilis 3_1_12] Length = 373 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 4/140 (2%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++ + L ++S S L + T+ + + F Sbjct: 221 GAQVDQSAINEELNRYRSELSKAQSDLADAKNALANVKPVTKEVVKEVEVAGPRAVFFQI 280 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S +V +Q ++L + + + G+ D A+ N +LS RA + Y Sbjct: 281 GKSKIDDYGMVNIQLAAKILKANPDKKYKVAGYADE--ATGSAKWNQKLSEARAQAVYDA 338 Query: 299 LMKSGVSEDRISKISGFAHH 318 L+K GVS+D++ I GF Sbjct: 339 LIKEGVSKDQLELI-GFGGT 357 >gi|90408529|ref|ZP_01216686.1| peptidoglycan-associated lipoprotein [Psychromonas sp. CNPT3] gi|90310348|gb|EAS38476.1| peptidoglycan-associated lipoprotein [Psychromonas sp. CNPT3] Length = 176 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 5/87 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD +S+ +L + L + +I G+TD N L RA S Sbjct: 76 FDYDTSVLKARYTKILDAHAKFLVDHPTKLLTIEGNTDER---GTPEYNIALGERRAMSV 132 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI 322 L GV+ +IS +S + + Sbjct: 133 STYLENMGVTSKQISIVS-YGEEKPVN 158 >gi|319794930|ref|YP_004156570.1| ompa/motb domain protein [Variovorax paradoxus EPS] gi|315597393|gb|ADU38459.1| OmpA/MotB domain protein [Variovorax paradoxus EPS] Length = 402 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 66/208 (31%), Gaps = 13/208 (6%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + D+ + L ST L+++ E + A KR Q L Sbjct: 194 TAETQPGQAADALYLERLPTSTVLQEATAAYEAGRMSEALGRYEAASKR-PDGQQLRIYS 252 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP------LPETIVVLQ 253 L+ T + + + +F S+ + L+ Sbjct: 253 GLYLTQSQLGRTADAEKTFGTIARLGLETNNLSVKFLFKPGSTDFLGDPKISAAYPMWLR 312 Query: 254 KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 +I A + + GHT + N RLSL RA S L+ + + S Sbjct: 313 QIARQAAQIDSCVVVTGHTSRT---GSESVNERLSLQRAVSVKSKLVTEAPPLAKKLRES 369 Query: 314 GFAHHRLKI---ASDPMNSANRRIDILV 338 G + A D ++ +RR++ V Sbjct: 370 GMGFRENIVGTGADDASDALDRRVEFKV 397 >gi|28871298|ref|NP_793917.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tomato str. DC3000] gi|213970867|ref|ZP_03398990.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tomato T1] gi|301384498|ref|ZP_07232916.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae pv. tomato Max13] gi|302059911|ref|ZP_07251452.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae pv. tomato K40] gi|302130510|ref|ZP_07256500.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28854548|gb|AAO57612.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|213924390|gb|EEB57962.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tomato T1] gi|331015672|gb|EGH95728.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 301 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 6/90 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L + L V I GH+D N LS RA + Sbjct: 178 FPGGGIELDANAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 G+ E +I + + Sbjct: 235 VMDYFKAQGIPEQQI-TLRFHGERYPLAPN 263 >gi|68637975|emb|CAI72626.1| putative outer membrane protein A [Bordetella petrii] Length = 138 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L ++ + + I GHTD+ N +LS RA S Sbjct: 62 FFDFDKSTLKPEGRQLLDQVAQQASGIDLETIIAVGHTDSI---GTEAYNQKLSERRAAS 118 Query: 295 AYQVLMKSGVSED 307 L+ GV Sbjct: 119 VKSYLVSKGVDPT 131 >gi|254464865|ref|ZP_05078276.1| OmpA/MotB [Rhodobacterales bacterium Y4I] gi|206685773|gb|EDZ46255.1| OmpA/MotB [Rhodobacterales bacterium Y4I] Length = 517 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 14/156 (8%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 ++ A I + + + + V + S F+ S+ P ++ Sbjct: 370 RQGSRFANAILAAEGEAGLEELQRLVTVLGGMRRLTASFR-------FEPGSARPDAQSR 422 Query: 250 VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK----SGVS 305 ++++ L S A N +++L RA + ++K + +S Sbjct: 423 SNIEQLARALEAGEFDAKEIVFAGFSDGVGPAEGNRQIALKRAGAVRDAVVKAAETADIS 482 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 RI + GF D NRR+++ V Sbjct: 483 RVRI-RTEGFGEALPMACDDSAWGRQINRRVEVWVR 517 >gi|150024778|ref|YP_001295604.1| OmpA family outer membrane protein [Flavobacterium psychrophilum JIP02/86] gi|149771319|emb|CAL42788.1| Probable outer membrane protein, OmpA family [Flavobacterium psychrophilum JIP02/86] Length = 283 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 10/114 (8%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +F +S + ++ + + L + I I G+ +P N +LS R Sbjct: 175 NNILFQINSEKLANGSSQIIIDLLDYLTNNPKIKIEIHGNICCNPNTND----VKLSYRR 230 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDP--MNSANRRIDILVEDR 341 A + L+K+G++ R+ G+ ANRR++IL+ ++ Sbjct: 231 AKYIFDYLIKNGIATSRLG-YHGYGSANPIYKIPEKSYQEELANRRVEILIIEK 283 Score = 45.7 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 11/98 (11%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD + + P T + L + + E++ I G TD+ N LS+ RA + Sbjct: 26 FDFNKTDINPTTKIKLDSLITS-KNKIEILKIYGFTDSVDTTT---YNDSLSIKRAKKIF 81 Query: 297 QVLMKSGVSEDRISKISGFAH--HRLKIASDPMNSANR 332 ++ V +I GF ++ K ++ NR Sbjct: 82 NYCKENKVQISNQVEIKGFGENYNQSKNSN-----KNR 114 >gi|85859515|ref|YP_461717.1| OmpA family outer membrane protein [Syntrophus aciditrophicus SB] gi|85722606|gb|ABC77549.1| outer membrane protein A protein family [Syntrophus aciditrophicus SB] Length = 226 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 12/105 (11%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV---ISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + L ++ L + + + GHT N LSL RA Sbjct: 129 FRFNRFDVSNYEKDQLDRLVSRLKERPDRPRELRVVGHTCDL---GSHPYNDHLSLMRAE 185 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 S L ++G ++S+ G + NRR++I + Sbjct: 186 SVAVYLGRNGF---KVSEAKGEGKRSPVSK---VGKLNRRVEIEI 224 >gi|313887403|ref|ZP_07821093.1| outer membrane protein 40 [Porphyromonas asaccharolytica PR426713P-I] gi|312923171|gb|EFR33990.1| outer membrane protein 40 [Porphyromonas asaccharolytica PR426713P-I] Length = 381 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 12/141 (8%) Query: 201 STLSGLVADNIVKGVLFETTRTGIL--ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 S+L A+ + V + ++ N F S+ ++ + E Sbjct: 246 SSLRAQNAELSKRPVSCPECPDALAPATAVNVIENVVAFRIGSAKIDKNQMINVYNSAEA 305 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317 + + I I G+ D N LS RA + L+ + GV+ D I I Sbjct: 306 VKANGGKIYIVGYADEQ--TGTPEINMSLSERRAEAVKNALINNYGVNPDNIV-IDFKGD 362 Query: 318 H-RLKIASDPMNSANRRIDIL 337 + ++ R+ I+ Sbjct: 363 TVQPFATNEWN-----RVAII 378 >gi|257093018|ref|YP_003166659.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045542|gb|ACV34730.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 566 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 19/122 (15%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNW 285 I+ + T F S+ + + + G+TD++ N Sbjct: 443 IVTKPVTVGFPSGSAELSKRAEKTVDSEMVPFIENNGKAYFEVSGNTDST---GSREVNQ 499 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS----------DPMNSANR-- 332 RLS RA + L+K +R I G+ R + + NR Sbjct: 500 RLSAARARAVVDYLVKQWEFPRERFK-IVGYGPDRPLCNEVNAAIEGLSLEDCRAINRTT 558 Query: 333 RI 334 R+ Sbjct: 559 RV 560 >gi|86361201|ref|YP_473088.1| outer membrane lipoprotein [Rhizobium etli CFN 42] gi|86285303|gb|ABC94361.1| probable outer membrane lipoprotein [Rhizobium etli CFN 42] Length = 178 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 36/111 (32%), Gaps = 9/111 (8%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 I+ F + S+ + L L + + ++G D A Sbjct: 62 ILSVGRRIYFKQDSAALDSVAMATLDNQAAWLNKNPTWLLKLQGFADD---SGSAAQMQT 118 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334 LS RA +A L GV R+ G+ + R S NRR+ Sbjct: 119 LSQKRADAAMAYLTSKGVDPKRMWA-KGYGNDREVRDC-TERSCKVQNRRV 167 >gi|329298438|ref|ZP_08255774.1| predicted outer membrane protein [Plautia stali symbiont] Length = 247 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 19/120 (15%) Query: 236 MFDKSS---SIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 +F S + + L +L I + G TD N L Sbjct: 133 LFRFGSANSNDISAQGREALSSFASMLKKENAAQRHIIVTGFTDPI---GSDSSNMALGQ 189 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--------SANRRIDILVEDR 341 RA + +L+ G++ I+ + + + ++ RR+ I VE++ Sbjct: 190 RRAEAVKALLIAQGMNAANITA-QSMGESQ-VNTNCSGSLQEQKACYASERRVIISVENK 247 >gi|269123013|ref|YP_003305590.1| YadA domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268314339|gb|ACZ00713.1| YadA domain protein [Streptobacillus moniliformis DSM 12112] Length = 2092 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 16/176 (9%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI 228 E + L ++ + + +L + +S L + + + Sbjct: 1928 GELDGINKKLEEQNNKLIAQNNKLNEKRGDLSKELKE-----LKDKISVIEKIKMNEDDL 1982 Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWR 286 + +L I L + + I G+TD + N Sbjct: 1983 YTLDGYRL---GIHELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNV---SGEDLNLE 2036 Query: 287 LSLDRAYSAYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L L RA + L + G+ I K+S ++ + + N NRR++I + Sbjct: 2037 LGLKRANVVAKKLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVEIELR 2092 >gi|149174963|ref|ZP_01853587.1| hypothetical protein PM8797T_11324 [Planctomyces maris DSM 8797] gi|148846300|gb|EDL60639.1| hypothetical protein PM8797T_11324 [Planctomyces maris DSM 8797] Length = 262 Score = 62.7 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 1/101 (0%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINA-TDDDTKKAIEQYFNPFGKNLMTASK 81 DD P + W + Y D M++L+ FF+++ ++ +D+ +AI + + Sbjct: 26 EDDAPPGVPEWVVTYGDMMSLLLTFFIMLVSLSEIVNDEKYRAILESIQSYTGYRTGPIS 85 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 Q + + + + +K S K Sbjct: 86 PPGKYFPMNSLVDQMSMLGAYTDSPDRGRGGIKTRSLEGKD 126 Score = 41.5 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 3/80 (3%) Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR--DNWRLSLDRAYSAYQVLM 300 L + LA I +R HT P + D L+ R + L+ Sbjct: 152 DLDARRREKLDLMIPELAGKPNKIELRSHTSVKPLPADSPIHDKLILTYQRGRAVMLYLI 211 Query: 301 KSGVSEDRISKISGFAHHRL 320 + G+ RI +I+ A Sbjct: 212 QKGIEPKRI-RITAAADSEP 230 >gi|126724638|ref|ZP_01740481.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150] gi|126705802|gb|EBA04892.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150] Length = 521 Score = 62.7 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 62/164 (37%), Gaps = 22/164 (13%) Query: 188 RKKRLQDLAKKISSTLSGLVADNI--VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 +RL + + +++ + D + + + +S F S+ Sbjct: 367 DTQRLTEQGEILANAIEKPDNDIAEIRRYLDVVRGGKKLSVSFH-------FKSGSTDLD 419 Query: 246 PETIVVLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 ++ L+++ +++ + + GH+D I N +S R+ + + + ++ Sbjct: 420 VQSSGNLERLAQIIEIGGMDGKELIFVGHSDGEGDAGI---NQSISNRRSNAVLRDIRRA 476 Query: 303 GVSEDRISKIS----GFAHHRLKIASDPMNSA--NRRIDILVED 340 S D +S++ GF D NRR+++ +++ Sbjct: 477 AKSAD-LSRVKLSGVGFGEVFPIACDDSEWGKRINRRVEVWIKE 519 >gi|146298734|ref|YP_001193325.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae UW101] gi|146153152|gb|ABQ04006.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101] Length = 267 Score = 62.7 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 12/117 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 T FD V+ + + E I I G+ D N+RLS DR Sbjct: 23 ETVYFDFDKYNLTESQSKVVNNFIKSIDTAKVESIQIYGYCDDR---GTDDYNFRLSHDR 79 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP------MNSANRRIDILVEDRQ 342 + +L+ SG E +I + G R+ + D NRR+D++V R Sbjct: 80 VNTIQNLLVSSGFKESKIVILEGKG--RVVVRPDTVENLYETRLRNRRVDLIVVKRN 134 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 10/114 (8%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIG-EVLAHSTEVISIRGHTDASPF---RNIARDNWR-- 286 + +FD S+ + L KI +L IRGH +P I +D Sbjct: 157 ESILFDMGSARLTHNSKRELDKIALTLLKQKNIQFEIRGHVCCTPEIYSDGIDKDTKERR 216 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 LS +RA + + L VS++R+ + G + D + RR++ L+ Sbjct: 217 LSWNRAKNVFNYLSSKKVSKNRM-RYQGCGNKFPLRMGDNYD---RRVEFLITK 266 >gi|330957747|gb|EGH58007.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. maculicola str. ES4326] Length = 301 Score = 62.7 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 23/90 (25%), Gaps = 6/90 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F L + L V I GH+D N LS RA + Sbjct: 178 FPGGGIELDAAAKARLDNMVAYLKADPTVNRIELDGHSDN---SGNRLTNRDLSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 GV E +I + + Sbjct: 235 VMDYFKAQGVPEQQI-TLRFHGERYPLAPN 263 >gi|60681175|ref|YP_211319.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343] gi|60492609|emb|CAH07381.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343] Length = 366 Score = 62.7 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 4/140 (2%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 ++ + L ++S S L + T+ + + F Sbjct: 214 GAQVDQNAINEELNRYRSELSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQI 273 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S +V +Q ++L + + I G+ D A+ N +LS RA + Y Sbjct: 274 GKSKIDDYGMVNIQLAAKILKANPDKKYKIAGYAD--KATGSAKWNQKLSEARAQAVYDA 331 Query: 299 LMKSGVSEDRISKISGFAHH 318 L+K GVS+D++ I GF Sbjct: 332 LIKEGVSKDQLELI-GFGGT 350 >gi|89069601|ref|ZP_01156940.1| OmpA family protein [Oceanicola granulosus HTCC2516] gi|89044799|gb|EAR50899.1| OmpA family protein [Oceanicola granulosus HTCC2516] Length = 176 Score = 62.7 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 43/139 (30%), Gaps = 11/139 (7%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + + I N +F S L + + Sbjct: 43 AMDDGAEGYMSPHRTRDGRPVCHRSEICGVMPNEQLFATDSYRISHANKQRLAQFFQ--Q 100 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + I GHTD N RLS +RA + + + RI + GF+ + Sbjct: 101 ANAFGYLIYGHTDER---ASYEYNVRLSENRARAVAE---VAASVGARIVDVKGFSESQP 154 Query: 321 KI--ASDPMNSANRRIDIL 337 + ++ NRR++I Sbjct: 155 RAEGSNPAAWQQNRRVEIY 173 >gi|118594345|ref|ZP_01551692.1| outer membrane protein, porin-associated lipoprotein [Methylophilales bacterium HTCC2181] gi|118440123|gb|EAV46750.1| outer membrane protein, porin-associated lipoprotein [Methylophilales bacterium HTCC2181] Length = 179 Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 36/108 (33%), Gaps = 11/108 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + FD S + V+ + + + G+ D +R N L RA Sbjct: 74 RSVYFDYDSFAIKSDFEGVISNHATFINKHDAAVVVYGNAD---YRGSHEYNLALGQKRA 130 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP----MNSANRRIDI 336 + Q L GV+ I IS F A+ +RR DI Sbjct: 131 VAVKQALEALGVNGSAIETIS-FGEEH---ANQTCTGSTCGQDRRADI 174 >gi|56479209|ref|YP_160798.1| lipoprotein [Aromatoleum aromaticum EbN1] gi|56315252|emb|CAI09897.1| hypothetical protein, possible lipoprotein [Aromatoleum aromaticum EbN1] Length = 226 Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 6/103 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F S+ L + L I+I G TD++ N L+L RA + Sbjct: 119 FALGSAKLSRAARSQLNAAMDDLLQVR-RITIIGRTDST---GPLAFNQDLALARALAVR 174 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 L ++ + + +D + NRR++++ Sbjct: 175 DHLRRTHPALAATLTLRARGACCFIAPNDTLAGRAQNRRVEVV 217 >gi|251771621|gb|EES52197.1| outer membrane protein, OmpA/MotB family [Leptospirillum ferrodiazotrophum] Length = 186 Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 11/103 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ E +L+K +L V + GH D N L RA +A Sbjct: 79 FGFDKSLLSSEDRGILKKDASILKAHPSVKVVIAGHADER---GTDAYNIVLGQKRAKAA 135 Query: 296 YQVLMKSGVSEDRISKISGFAHHR-LKIA-----SDPMNSANR 332 L++ GVS RI +S + + ++ S NR Sbjct: 136 RIYLIRLGVSAKRIKIVS-YGKREIPNYSVCSDHNESCWSKNR 177 >gi|110634419|ref|YP_674627.1| OmpA/MotB [Mesorhizobium sp. BNC1] gi|110285403|gb|ABG63462.1| OmpA/MotB [Chelativorans sp. BNC1] Length = 703 Score = 62.3 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285 +T F+ S+ I L+ + + + E I GHTDA N Sbjct: 582 DLDTINFEFGSASIAESEIPKLEGVANAMLEVLERNPAETFLIEGHTDAV---GSDVANL 638 Query: 286 RLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA + + L G+ + + G+ LKI + NRR+ I Sbjct: 639 ALSDRRADAVAEALSNVFGIPPENLVT-QGYGEQYLKINTQERERENRRVAI 689 >gi|71908258|ref|YP_285845.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71847879|gb|AAZ47375.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 225 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 12/106 (11%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F S+ P L ++ L + I+I G TD + N L+L RA + Sbjct: 118 FGLGSAKLSPAAHTSLNEVMTALLSAR-QITIIGRTDNT---GPLAFNESLALARALAVR 173 Query: 297 QVLMKSGVSEDRI---SKISGFAHHRLKIASDPMNSA--NRRIDIL 337 L+K R+ + A+D + NRR++++ Sbjct: 174 DHLIKK---YPRLMPTLSVKARGACCFIAANDTLAGRTQNRRVELV 216 >gi|330955899|gb|EGH56159.1| OmpA/MotB [Pseudomonas syringae Cit 7] Length = 132 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 I GH D N ++S +RA S + SG+ +R+S+ G + A+D Sbjct: 4 ILGHADT---SGPTEANQKISQERAQSVAAIFRLSGLERNRLSQ-RGMGAVMPRAANDSL 59 Query: 327 -MNSANRRIDIL 337 + NRR++IL Sbjct: 60 QGRALNRRVEIL 71 >gi|302381877|ref|YP_003817700.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] gi|302192505|gb|ADL00077.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 382 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289 + FD S E V+ + + + G+ D A N LS Sbjct: 274 REFVVYFDWDRSDLTAEARSVVTQAATYAKSGRPTRVLVVGYADT---SGSAAYNVGLSN 330 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 RA + L+ +GV+ + + G L + NRR I Sbjct: 331 RRARTVADALVSNGVNGG-VIALDGKGETNLARPTADGVREPLNRRATI 378 >gi|218128457|ref|ZP_03457261.1| hypothetical protein BACEGG_00025 [Bacteroides eggerthii DSM 20697] gi|217989348|gb|EEC55661.1| hypothetical protein BACEGG_00025 [Bacteroides eggerthii DSM 20697] Length = 410 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 6/135 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 P + ++++ ++A S L A + ET +I T Sbjct: 254 PQLISALELSAMQQQIAEMAAANQQLESALTAAQNRPVEVAETEVVVTDPNI--APRTVF 311 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ P ++ + + + + ++ G+ D+ N LSL RA + Sbjct: 312 FNIGSAEVSPREVMNISYLAKQMQEFPNATYTVNGYADS--ATGTPEFNKELSLKRAQAV 369 Query: 296 YQVLMK-SGVSEDRI 309 VL+K G+S DR+ Sbjct: 370 VDVLVKDYGISADRL 384 >gi|117676216|ref|YP_863792.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3] gi|117615040|gb|ABK50493.1| OmpA/MotB domain protein [Shewanella sp. ANA-3] Length = 247 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 30/229 (13%), Positives = 64/229 (27%), Gaps = 16/229 (6%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + +K + + Y N + + S DL + K + + Sbjct: 25 STEKPEISDCCSKTIYDQNINVRHQQRYDVRNLSADAGRKIGDLDLAFELEKARDAAVND 84 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM- 236 + + R + S L + + I I + + Sbjct: 85 GRSSMMNYYRDVYRAAVSSAYSDSYLPTQAPAANDEKRDLQQFNADAQIIIHQPTDRTLY 144 Query: 237 FDKSSSIPLP--ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ + E VL K + L + + + G+ D A N L RA Sbjct: 145 FEYDAVGYSDIAEAQYVLAKHRDYLLKTHGRVLVVGYAD---ISGSADYNLALGRKRAER 201 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR--LKIASDPMNSAN----RRIDIL 337 L+ GV + + + + ++ N R++++ Sbjct: 202 VKNELVTKGVPSE-LISVVSYGASYSPPLMSGHTD---NLKLWRKVELY 246 >gi|94263332|ref|ZP_01287147.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93456287|gb|EAT06417.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 272 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 21/112 (18%) Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIAR---DNWRLSLDRAYSAYQV 298 + L E A E + I GHTD P R+ +R DNW LS RA AY+ Sbjct: 143 PCYTADPPAYLNCSPEH-AGKLESVFIEGHTDNVPLRDGSRKFQDNWDLSAQRAIFAYRS 201 Query: 299 LM------------KSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 ++ +G I +SG+ R + + ++ANRRID+ Sbjct: 202 MVIGEQPLLGQLTNTAGFP---IFSVSGYGEGRPRNRYEAPTADAANRRIDL 250 >gi|126699538|ref|YP_001088435.1| hypothetical protein CD1929 [Clostridium difficile 630] gi|255306922|ref|ZP_05351093.1| hypothetical protein CdifA_10067 [Clostridium difficile ATCC 43255] gi|115250975|emb|CAJ68804.1| putative membrane protein [Clostridium difficile] Length = 210 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 22/119 (18%) Query: 236 MFDKSSSIPLPETIVVLQKI--------GEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 MFD S + PE +L+ + I I GHTD N L Sbjct: 86 MFDVDSDVLKPEAKEMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDV---GSYIYNLDL 142 Query: 288 SLDRAYSAYQVLMKSGVSE--------DRISKISGFAHHRLK--IASDPMNSANRRIDI 336 S RAYS + ++ + + I I G + L + A+RR+++ Sbjct: 143 SQRRAYSVAKFIVGDEIGDYKYKDKVTKHIIAI-GRSKAELIKNGDNSVNRDASRRVEL 200 >gi|254975524|ref|ZP_05271996.1| hypothetical protein CdifQC_09444 [Clostridium difficile QCD-66c26] gi|255092912|ref|ZP_05322390.1| hypothetical protein CdifC_09699 [Clostridium difficile CIP 107932] gi|255314653|ref|ZP_05356236.1| hypothetical protein CdifQCD-7_09900 [Clostridium difficile QCD-76w55] gi|255517327|ref|ZP_05385003.1| hypothetical protein CdifQCD-_09486 [Clostridium difficile QCD-97b34] gi|255650433|ref|ZP_05397335.1| hypothetical protein CdifQCD_09639 [Clostridium difficile QCD-37x79] gi|260683545|ref|YP_003214830.1| hypothetical protein CD196_1809 [Clostridium difficile CD196] gi|260687205|ref|YP_003218339.1| hypothetical protein CDR20291_1852 [Clostridium difficile R20291] gi|306520411|ref|ZP_07406758.1| hypothetical protein CdifQ_11096 [Clostridium difficile QCD-32g58] gi|260209708|emb|CBA63457.1| putative membrane protein [Clostridium difficile CD196] gi|260213222|emb|CBE04721.1| putative membrane protein [Clostridium difficile R20291] Length = 210 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 22/119 (18%) Query: 236 MFDKSSSIPLPETIVVLQKI--------GEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 MFD S + PE +L+ + I I GHTD N L Sbjct: 86 MFDVDSDVLKPEAKEMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDV---GSYIYNLDL 142 Query: 288 SLDRAYSAYQVLMKSGVSE--------DRISKISGFAHHRLK--IASDPMNSANRRIDI 336 S RAYS + ++ + + I I G + L + A+RR+++ Sbjct: 143 SQRRAYSVAKFIVGDEIGDYKYKDKVTKHIIAI-GRSKAELIKNGDNSVNRDASRRVEL 200 >gi|85705706|ref|ZP_01036803.1| OmpA domain protein [Roseovarius sp. 217] gi|85669696|gb|EAQ24560.1| OmpA domain protein [Roseovarius sp. 217] Length = 523 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 53/165 (32%), Gaps = 12/165 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + ++ + A I+ + L D + + V + + F+ Sbjct: 366 DQTPEEIEINAQGDRFANAIAQAGAELGLDELQRMVRVLGPLKRLTTTFR-------FEA 418 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S ++ +++ + S A N ++L RA + + + Sbjct: 419 GSVRLDAQSRSNAEQLARAMELGHYDARRLVFVGFSDGDGPAGTNRDIALRRAETVRRAV 478 Query: 300 MKSGVSE--DRI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 +++ + +RI ++ F D NRR+++ V Sbjct: 479 VRAAETANLERIKLELEAFGEAMPMACDDTAWGRQVNRRVEVWVR 523 >gi|84387079|ref|ZP_00990102.1| putative outer membrane protein [Vibrio splendidus 12B01] gi|84378154|gb|EAP95014.1| putative outer membrane protein [Vibrio splendidus 12B01] Length = 205 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 +F +S+ P + ++++ L I ++G+ A+ N +LS +RA Sbjct: 84 HILFANNSTEINPVFLGQIRQMAAFLKRYEGTSIELQGYASKV---GNAKHNLKLSKERA 140 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHR 319 + L+ +G+ R++ I G Sbjct: 141 SHVRRALISNGIQPSRVN-IVGHGDSE 166 >gi|114706797|ref|ZP_01439697.1| outer membrane lipoprotein [Fulvimarina pelagi HTCC2506] gi|114537745|gb|EAU40869.1| outer membrane lipoprotein [Fulvimarina pelagi HTCC2506] Length = 176 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + F+ SS + LQ+ + L + ++ GH+D N L R Sbjct: 67 DRIFFETDSSAITADAQQTLQRQAQWLNQYPQYQITVEGHSDER---GTREYNLALGARR 123 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A + L + GV+ R+ IS + R + S NRR + V G Sbjct: 124 AAATRDYLAQLGVNAGRMRTIS-YGKERPVAVCDNISCWSQNRRA-VTVLSGAG 175 >gi|153843472|ref|ZP_01993564.1| ATP-dependent protease La [Vibrio parahaemolyticus AQ3810] gi|149745319|gb|EDM56570.1| ATP-dependent protease La [Vibrio parahaemolyticus AQ3810] Length = 344 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 4/98 (4%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + S L + + E I+I + ++ F + S+ P+ ++++I E+ Sbjct: 17 MESIKKALEREIEQGAIEVENLGQQIVIRMREK---GAFPEGSAFLQPKFRPLVRQIAEL 73 Query: 259 LAHSTEVISIRGHTDASPFRNI-ARDNWRLSLDRAYSA 295 + ++ I GHTD + R NW LS RA S Sbjct: 74 VKDVPGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSV 111 >gi|149918190|ref|ZP_01906682.1| OmpA domain protein [Plesiocystis pacifica SIR-1] gi|149820950|gb|EDM80357.1| OmpA domain protein [Plesiocystis pacifica SIR-1] Length = 780 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 75/297 (25%), Gaps = 26/297 (8%) Query: 59 DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118 +D K + + F P S D S E + Sbjct: 486 EDAKVSFPGLASNVILTDANGMFTSFRFPEGPVSISVELPDGSFVEQTAEVRNGEDASVD 545 Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD-----LEKSINKEENY 173 + + + E + S+ D ++ S + + + + + Sbjct: 546 VIAEVVAAEDPVFDGTFLNADGEGVQVSVALDGMGIQESFDSDENGRIAIALPMGEYKAT 605 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI------LIS 227 K + + + + + + + G T + + Sbjct: 606 LTAEGLPPKDITFSVTEEGAIVTETLGAESAEGGDAAAGGGAADPGMETPLISGNKYRVR 665 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--TEVISIRGHTDASPFRNIARDNW 285 + + + ++ L ++ L + +R HTD Sbjct: 666 VKKKPRY----SGGELNEDKSAEGLDQLAAFLLAHPEYGKVQVRVHTDDRGNPKKR---- 717 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 S DRA + L+K GV R+ G+ + N R + V + Sbjct: 718 --SQDRADAVVSYLVKKGVPAGRLEA-KGWGAKDPVAVNITSDGRRKNNRTEFRVRE 771 >gi|94497803|ref|ZP_01304369.1| probable outer membrane protein [Sphingomonas sp. SKA58] gi|94422692|gb|EAT07727.1| probable outer membrane protein [Sphingomonas sp. SKA58] Length = 215 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 12/83 (14%) Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 I++RGH+D+ DN S RA L++ GV++DRI+ I+ R Sbjct: 110 GPITLRGHSDSR---GADGDNKVASAKRAELVRDYLVEKGVAKDRITLIA-IGEGRPVAP 165 Query: 324 S-------DPMN-SANRRIDILV 338 + DP + NRR+D+ V Sbjct: 166 NVREDGSDDPEGQAKNRRVDVTV 188 >gi|120556584|ref|YP_960935.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8] gi|120326433|gb|ABM20748.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8] Length = 146 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 8/110 (7%) Query: 230 DQRNTPMFDKS--SSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 D+ + F I +L++ + + I GH D A N Sbjct: 31 DRPHRTRFHYGFNKHTLDAPDIDMLKRHAAYIKGHPGMQVRIHGHADNF---GSAEYNRF 87 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 L+ RA + ++L++ GVS+ I + + R ++ANRR+++ Sbjct: 88 LARLRANAVARLLIQEGVSQSSILLAT-WGSDRPL-TRPEDHAANRRVEL 135 >gi|89890270|ref|ZP_01201780.1| hypothetical protein BBFL7_02242 [Flavobacteria bacterium BBFL7] gi|89517185|gb|EAS19842.1| hypothetical protein BBFL7_02242 [Flavobacteria bacterium BBFL7] Length = 286 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 81/257 (31%), Gaps = 24/257 (9%) Query: 97 KIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKD 156 + D +I + +++ ++ K S + S Sbjct: 36 ETDSAILTEQSIKNLEARLIVDQTTKITAIALIGYCDDRGSVSYNQQLATNRVQSVINYL 95 Query: 157 LCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK-RLQDLAKKISSTLSGLVADNIVKGV 215 + TD L S K + ++ + K+ +V D+I K Sbjct: 96 KPRFTDNYFQQKIVGEVPLKNRSNIKAQRYRNRRVEISVTYKRTIDIPKAVVNDSIEKYR 155 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ-KIGEVLAHSTEVISIRGHTD- 273 ++ + + I N +F + + V+ I +L H I I+GH Sbjct: 156 SYDILKDSLQIGDKLVFNNVIFYPGRHVLRESSFPVMDSIINSLLLHKKYEIEIQGHICC 215 Query: 274 -ASPFRNIARDN--WRLSLDRAYSAYQVLMKSGVSEDRISKI-------SGFAHHRLKIA 323 + D W LS RA + L+K GV+ DR++ I +G Sbjct: 216 LSPGVYGRDMDTGQWNLSKARAEQVKRFLVKYGVAADRLTTIGKQANFKTGKGDFY---- 271 Query: 324 SDPMNSANRRIDILVED 340 +RR++I + Sbjct: 272 -------DRRVEIHITG 281 Score = 43.4 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 45/122 (36%), Gaps = 14/122 (11%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQ-KIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 + + + F+ S+I ++I L+ ++ I++ G+ D N Sbjct: 25 QVSTEELSIYFETDSAILTEQSIKNLEARLIVDQTTKITAIALIGYCDDR---GSVSYNQ 81 Query: 286 RLSLDRAYSAYQVLMKSGVS---EDRISKISGFAHHRLKIASDPMNS--ANRRIDILVED 340 +L+ +R S L + +I LK S+ NRR++I V Sbjct: 82 QLATNRVQSVINYLKPRFTDNYFQQKIV-----GEVPLKNRSNIKAQRYRNRRVEISVTY 136 Query: 341 RQ 342 ++ Sbjct: 137 KR 138 >gi|302384369|ref|YP_003820192.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] gi|302194997|gb|ADL02569.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 385 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289 + FD S E V+ + + + G+ D A N LS Sbjct: 277 REFVVYFDWDRSDLTAEARSVVTQAATYAKSGRPTRVLVVGYADT---SGSAAYNVGLSN 333 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 RA + L+ +GV+ + + G L + NRR I Sbjct: 334 RRARTVADALVSNGVNGG-VIALDGKGETNLARPTADGVREPLNRRATI 381 >gi|237731623|ref|ZP_04562104.1| outer membrane protein A [Citrobacter sp. 30_2] gi|226907162|gb|EEH93080.1| outer membrane protein A [Citrobacter sp. 30_2] Length = 348 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 7/91 (7%) Query: 232 RNTPMFDKSSSIPLPE---TIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS 288 ++ MF S+ PE I L + + + + G++D + A N +LS Sbjct: 229 KSDVMFGYDSAALTPEGKAAIAQLYRNPGLQPAKDKATVVIGYSDRT---GAADYNQQLS 285 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 RA + L+ G+ I+ G Sbjct: 286 AQRAQAVADELVALGMPAANITA-QGHGSSD 315 >gi|162453377|ref|YP_001615744.1| hypothetical protein sce5101 [Sorangium cellulosum 'So ce 56'] gi|161163959|emb|CAN95264.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 190 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRA 292 F SS PLP+ V L+ + + L S+ I + G D A N LSL RA Sbjct: 80 SFAFDSSEPLPQEHVELRALVDCLRSSSLEGARIELVGRADPR---GTAAYNQDLSLRRA 136 Query: 293 YSAYQVLMKSGVSEDRI-SKISGFAH---HRLKIASDPMNSANRRIDILV 338 ++L+K G+ DRI ++ +G + + + +RR+D+ + Sbjct: 137 ARVKEILVKEGIPADRITTRATGASEAVGAQPMYS----YGYDRRVDVAL 182 >gi|299133120|ref|ZP_07026315.1| OmpA/MotB domain protein [Afipia sp. 1NLS2] gi|298593257|gb|EFI53457.1| OmpA/MotB domain protein [Afipia sp. 1NLS2] Length = 345 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 10/101 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFRNIARDNW 285 +T F+ S P+ LQ I + + + + I GHTDA DN Sbjct: 221 DLDTINFETGSWDISPDQAAKLQVIADGMNRAIQHNPQTVFLIEGHTDAV---GNDVDNL 277 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASD 325 LS RA SA ++L + GV + ++ G+ LK+ SD Sbjct: 278 SLSDRRAESAAELLTQQFGVPAENLTS-QGYGEQYLKVPSD 317 >gi|319783370|ref|YP_004142846.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169258|gb|ADV12796.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 185 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 49/161 (30%), Gaps = 9/161 (5%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFD 238 A + +K+ + + N + R + + F Sbjct: 18 PSLAAAQATTPSAATIERKLEAAPRVKLRPNERVTIREFKRRPDLRRMARSIDIQSINFA 77 Query: 239 KSSSIPLPETIVVLQKIGEVLA-----HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 S+ ++ I + L + I GHTDA + N LS RA Sbjct: 78 FGSAAIANSQYDKIETIADALRRILRRDPGARVLIEGHTDAV---GSFQSNQALSEQRAA 134 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 S + L++ + G+ L + + N NRR+ Sbjct: 135 SLKRTLVREFRVPGHALETVGYGEEFLLVQTQNENWQNRRV 175 >gi|319781028|ref|YP_004140504.1| peptidoglycan-associated lipoprotein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166916|gb|ADV10454.1| peptidoglycan-associated lipoprotein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 168 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD S+ + L + + L + I + GH D N L R Sbjct: 59 DRIFFDTDSTSIRADAQTTLSRQAQWLNQYKQYAIVVEGHADER---GTREYNLALGARR 115 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + L+ GVS R+ IS + R S NRR Sbjct: 116 AAATRDFLVAKGVSASRLKTIS-YGKERPVAVCDDISCWSQNRR 158 >gi|255101058|ref|ZP_05330035.1| hypothetical protein CdifQCD-6_09624 [Clostridium difficile QCD-63q42] Length = 210 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 22/119 (18%) Query: 236 MFDKSSSIPLPETIVVLQKI--------GEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 MFD S + PE +L+ + I I GHTD N L Sbjct: 86 MFDIDSDVLKPEAKEMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDV---GSYIYNLDL 142 Query: 288 SLDRAYSAYQVLMKSGVSE--------DRISKISGFAHHRLK--IASDPMNSANRRIDI 336 S RAYS + ++ + + I I G + L + A+RR+++ Sbjct: 143 SQRRAYSVAKFIVGDEIGDYKYKDKVTKHIIAI-GRSKAELIKNGDNSVNRDASRRVEL 200 >gi|50084798|ref|YP_046308.1| putative antigen [Acinetobacter sp. ADP1] gi|49530774|emb|CAG68486.1| putative antigen [Acinetobacter sp. ADP1] Length = 281 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 17/141 (12%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST---EVISIR 269 + V+ + +I++ + LP L+++ + + I + Sbjct: 142 QPVIVKQKEQVDIINLSADALFKFNGSGLNDLLPRGHEELERLSNDIRNHYIAVSRIHLV 201 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK------IA 323 GHTD N+ L L RA + L+K G+ I S + I+ Sbjct: 202 GHTDRI---GSDSYNYNLGLKRAQTVKNYLVKDGIPAKTI-SFSSAGKSQPISNGCFDIS 257 Query: 324 SDPM----NSANRRIDILVED 340 + +RR+ + + Sbjct: 258 NMTSLKECLQVDRRVSVEITG 278 >gi|84502672|ref|ZP_01000791.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola batsensis HTCC2597] gi|84389067|gb|EAQ01865.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola batsensis HTCC2597] Length = 681 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 71/238 (29%), Gaps = 12/238 (5%) Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 S + + + ++ + + ++ TR Sbjct: 426 PDGSYKVYRNDDVLMFQPGTDVKTYAYDDGSTRTVATRDDGVTIETIRAADGTVLRRTRI 485 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 G+++ D S E N + + + + A + + Sbjct: 486 LPDGQEVVLFDDTRDSQEVEVNELPQVTDTRNRIDFQSAQEDELRAALQARAPEAVDRRF 545 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-----V 265 + V ++ I + F+ S++ P L ++G+++ E + Sbjct: 546 SLSQVRNINAVRQLVPEI--DVDNINFETGSAVIRPAEAEELARLGQLMRERIEENPGEI 603 Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 I GHTDA N LS RA S L + V + + I G+ LK+ Sbjct: 604 FLIEGHTDAV---GSGSYNLALSDRRAESVALALTEYFDVPPENMV-IQGYGETDLKV 657 >gi|319945287|ref|ZP_08019549.1| OmpA domain protein [Lautropia mirabilis ATCC 51599] gi|319741857|gb|EFV94282.1| OmpA domain protein [Lautropia mirabilis ATCC 51599] Length = 477 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 66/243 (27%), Gaps = 12/243 (4%) Query: 99 DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158 D+ + + + Q + + ++ + L Sbjct: 243 DVVEVFGGAQTPAQGRETLELIRAQVPNGYRVLARDEAGAAGASRLAAAGAAAQGAQRLA 302 Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 + L + + R R ++ T ++ V Sbjct: 303 DANRLAGRDARAQADAQKAADARNAATKARDARNSRDSRNARDTRQAATDSRNLRTVAAG 362 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 + S+ F SS P LQ++G L T + + G+ D Sbjct: 363 SCPR----SLKQLSAPIFFKSGSSSLSPAETRRLQQLGACL-GRTAWVRVTGYADPRY-- 415 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMNSANRRID 335 A N LS RA + + + G S RI + G A RR+D Sbjct: 416 -SAAYNKTLSERRARAVAGAISEGGFSSARI-TVVGAGKTSPRTKVRADKATLQRARRVD 473 Query: 336 ILV 338 ILV Sbjct: 474 ILV 476 >gi|182414999|ref|YP_001820065.1| OmpA/MotB domain-containing protein [Opitutus terrae PB90-1] gi|177842213|gb|ACB76465.1| OmpA/MotB domain protein [Opitutus terrae PB90-1] Length = 197 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 39/116 (33%), Gaps = 7/116 (6%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNW 285 SI FD S LQK + + E + GH D A N Sbjct: 73 SIRGMFEPVYFDFDKSDIKQAERAKLQKAADYMKQHPEQRILLEGHCDWR---GTAEYNL 129 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSANRRIDILVED 340 L RA +A + L +RI +S D + +RR+DI++ Sbjct: 130 GLGDRRANAAKRYLSSL-APAERIETLS-KGSLDAAQNGDDAAMAKDRRVDIVILK 183 >gi|209883450|ref|YP_002287307.1| OmpA/MotB [Oligotropha carboxidovorans OM5] gi|209871646|gb|ACI91442.1| OmpA/MotB [Oligotropha carboxidovorans OM5] Length = 323 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 10/104 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFRNIARDNW 285 +T F+ S P+ LQ I + + + + I GHTDA DN Sbjct: 199 DLDTINFETGSWDIPPDQAAKLQVIADGMNRAIQRNPQTVFLIEGHTDAV---GSDVDNL 255 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328 LS RA SA ++L + GV + ++ G+ LK+A+D Sbjct: 256 SLSDRRAESAAELLTQQFGVPPENLTS-QGYGEQYLKVATDGAE 298 >gi|319902635|ref|YP_004162363.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] gi|319417666|gb|ADV44777.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] Length = 386 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 13/155 (8%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII-DQRNTPMFDKSSSIPL 245 + +++ + + L ++ + F S+ Sbjct: 240 ALNDEINRYRSELAQSQADLANAKNALANAKPAETKEVVKEVQVAGPRAIFFKIGSAKID 299 Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 V +Q + L +++ I G+ D + N +LS RA + Y L+ GV Sbjct: 300 DYGKVNIQLAAKTLKGNSDRKYKIAGYCD--KATGSSSWNQKLSEKRAQAVYDALIAEGV 357 Query: 305 SEDRISKISGFAHHRLKIASDPMNSAN--RRIDIL 337 +D++ + GF N R+ IL Sbjct: 358 DKDQLELV-GFGGTENMF------GKNFLNRVVIL 385 >gi|301328313|ref|ZP_07221421.1| OmpA family protein [Escherichia coli MS 78-1] gi|300845245|gb|EFK73005.1| OmpA family protein [Escherichia coli MS 78-1] Length = 188 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 7/115 (6%) Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 + + L GV + I++++ N FD SS+ P L + Sbjct: 80 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAM 136 Query: 258 VLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 VL + +++ G+TD++ N RLS RA S L GV RI Sbjct: 137 VLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQRADSVASALTPQGVDASRIRT 188 >gi|322515359|ref|ZP_08068353.1| outer membrane protein A [Actinobacillus ureae ATCC 25976] gi|322118586|gb|EFX90814.1| outer membrane protein A [Actinobacillus ureae ATCC 25976] Length = 156 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 9/105 (8%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD S + L I + + S + ++I G+TD N +LS +R Sbjct: 57 GDFLFDFDKSNLTAKGKATLNNIAQEIKASGAKKVAITGYTDRL---GSPAYNQKLSQER 113 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 A SA L+ GV ++ + G + NRR+ I Sbjct: 114 ANSAKAYLVNQGVKA-QMKAV-GRGEANQVKSCLKP---NRRVHI 153 >gi|237714325|ref|ZP_04544806.1| major outer membrane protein OmpA [Bacteroides sp. D1] gi|262408158|ref|ZP_06084705.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294645116|ref|ZP_06722841.1| OmpA family protein [Bacteroides ovatus SD CC 2a] gi|298480179|ref|ZP_06998377.1| major outer membrane protein OmpA [Bacteroides sp. D22] gi|229445489|gb|EEO51280.1| major outer membrane protein OmpA [Bacteroides sp. D1] gi|262353710|gb|EEZ02803.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639540|gb|EFF57833.1| OmpA family protein [Bacteroides ovatus SD CC 2a] gi|298273460|gb|EFI15023.1| major outer membrane protein OmpA [Bacteroides sp. D22] Length = 395 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 52/144 (36%), Gaps = 5/144 (3%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNT 234 + + I ++ + + ++ + + + ++I+ T Sbjct: 235 QRPTPQIISELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRT 294 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S P+ + L + + S +I G+ D+ N +LSL+RA Sbjct: 295 VFFKIGSDKLSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQ 352 Query: 294 SAYQVLMKS-GVSEDRISKISGFA 316 +L+K G+S DR+ +G Sbjct: 353 VVKDLLVKKYGISADRLKVAAGGG 376 >gi|163815615|ref|ZP_02206988.1| hypothetical protein COPEUT_01790 [Coprococcus eutactus ATCC 27759] gi|158449252|gb|EDP26247.1| hypothetical protein COPEUT_01790 [Coprococcus eutactus ATCC 27759] Length = 251 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 70/198 (35%), Gaps = 26/198 (13%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 +S +S ++ + ++ ++ + +++K L +A S + L + + + Sbjct: 40 QSKRQYESKQEQLDEQKKIIADQEKMLGEQQKELDRIAGIRSDLVKALRDEFSGSSLNVK 99 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI---------GEVLAHSTEVISIR 269 I+ +FD S S + + + + I I Sbjct: 100 IDEKTGAITF---DAGVLFDVSDSELKEDGKKFINQFLPKYCSVLLSDDYRDYVSEIIIE 156 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVL--MKSGV----SEDRISKI---SGFAHHRL 320 GHTD N LS RA+S + +G+ E+++ + +G ++ Sbjct: 157 GHTDT---NGSYIYNLELSQQRAFSVARYCLTESNGIISSGQEEQLRTVLTANGKSYSNP 213 Query: 321 KIASDPM--NSANRRIDI 336 D A+RR++I Sbjct: 214 IYGDDGEVDMDASRRVEI 231 >gi|54302595|ref|YP_132588.1| hypothetical protein PBPRB0916 [Photobacterium profundum SS9] gi|46916019|emb|CAG22788.1| hypothetical protein PBPRB0916 [Photobacterium profundum SS9] Length = 208 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 8/118 (6%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 +L + +Q+ FD + + +L I L + + + GH+D Sbjct: 82 LLAQLPEQKEVIYFDNMNYELSVKNQQLLDPIALRLKLHLDSYLIVIGHSDD---AGSKE 138 Query: 283 DNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDIL 337 +N LS +RA+S + G+ E+RI +I L + NRR++++ Sbjct: 139 ENLVLSFERAFSVAIYISSVFGIEEERI-QIVALGDDELISNGNSEQERRLNRRVEVI 195 >gi|294809732|ref|ZP_06768419.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b] gi|294443066|gb|EFG11846.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b] Length = 390 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 52/144 (36%), Gaps = 5/144 (3%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNT 234 + + I ++ + + ++ + + + ++I+ T Sbjct: 230 QRPTPQIISELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRT 289 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S P+ + L + + S +I G+ D+ N +LSL+RA Sbjct: 290 VFFKIGSDKLSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQ 347 Query: 294 SAYQVLMKS-GVSEDRISKISGFA 316 +L+K G+S DR+ +G Sbjct: 348 VVKDLLVKKYGISADRLKVAAGGG 371 >gi|295088071|emb|CBK69594.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Bacteroides xylanisolvens XB1A] Length = 395 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 52/144 (36%), Gaps = 5/144 (3%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNT 234 + + I ++ + + ++ + + + ++I+ T Sbjct: 235 QRPTPQIISELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRT 294 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S P+ + L + + S +I G+ D+ N +LSL+RA Sbjct: 295 VFFKIGSDKLSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQ 352 Query: 294 SAYQVLMKS-GVSEDRISKISGFA 316 +L+K G+S DR+ +G Sbjct: 353 VVKDLLVKKYGISADRLKVAAGGG 376 >gi|259417565|ref|ZP_05741484.1| OmpA/MotB [Silicibacter sp. TrichCH4B] gi|259346471|gb|EEW58285.1| OmpA/MotB [Silicibacter sp. TrichCH4B] Length = 517 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 12/165 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + + + L+ I S + + + + + S F+ Sbjct: 360 DQAPEYIPMRMQGERLSNAIKSAGDDIPLGELKRMISGLDGLQRLTTSFR-------FEA 412 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 SS P ++ + I L S A N ++L RA S + + Sbjct: 413 GSSRPDAQSRNNIDLIARELEAGVYDGKRMVFVGFSDGEGPAEGNRAIALKRAESVRRAV 472 Query: 300 MKSGVSE--DRIS-KISGFAHHRLKIASDPMNSA--NRRIDILVE 339 ++ + DRI+ + + + D NRR+++ V Sbjct: 473 ERAAETANLDRITIETAAYGEALPIACDDSAWGRQANRRVEVWVR 517 >gi|29346911|ref|NP_810414.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron VPI-5482] gi|29338809|gb|AAO76608.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron VPI-5482] Length = 363 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 10/137 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 +V + + E + + I + F +S+ + + + E L + Sbjct: 233 EPVVTEQPKPAPVVEQPQPKKEVVIEPLKQNIFFAINSAKIQDDQQAKIASLVEYLEKNA 292 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLK 321 +S+ G+ D AR N +LS RA + + L G++ DRI ++ + Sbjct: 293 TAKVSVTGYAD--KGTGNARINSKLSEKRANNVVEALKAKGIAADRI-TVAYKGDTVQPY 349 Query: 322 IASDPMNSANRRIDILV 338 + P R+ I + Sbjct: 350 --NTPEE---NRVSICI 361 >gi|255655882|ref|ZP_05401291.1| hypothetical protein CdifQCD-2_09334 [Clostridium difficile QCD-23m63] gi|296450696|ref|ZP_06892449.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296879187|ref|ZP_06903182.1| conserved hypothetical protein [Clostridium difficile NAP07] gi|296260540|gb|EFH07382.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296429730|gb|EFH15582.1| conserved hypothetical protein [Clostridium difficile NAP07] Length = 210 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 22/119 (18%) Query: 236 MFDKSSSIPLPETIVVLQKI--------GEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 MFD S + PE +L+ + I I GHTD N L Sbjct: 86 MFDIDSDVLKPEAKEMLKMFVPKYMETIYKDYGDYISKIVIEGHTDDV---GSYIYNLDL 142 Query: 288 SLDRAYSAYQVLMKSGVSE--------DRISKISGFAHHRLK--IASDPMNSANRRIDI 336 S RAYS + ++ + + I I G + L + A+RR+++ Sbjct: 143 SQRRAYSVAKFIVGDEIGDYKYKDKVTKHIIAI-GRSKAELIKNGDNSVNRDASRRVEL 200 >gi|149189863|ref|ZP_01868143.1| putative sodium-type flagellar protein MotY precursor [Vibrio shilonii AK1] gi|148836349|gb|EDL53306.1| putative sodium-type flagellar protein MotY precursor [Vibrio shilonii AK1] Length = 334 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 8/99 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294 FD + E LQ + + + + GHTD + N ++S RA Sbjct: 214 FDFGQRVVTSEQRQTLQSLASYIKADGHISKVLVDGHTDNV---GSSLSNLQVSRVRADD 270 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSAN 331 VL + G + ++ ++ +++ + N Sbjct: 271 VASVLTELG-TPAKLIEVRAHGARYPVSSNETEFGQAKN 308 >gi|119468930|ref|ZP_01611955.1| hypothetical protein ATW7_04182 [Alteromonadales bacterium TW-7] gi|119447582|gb|EAW28849.1| hypothetical protein ATW7_04182 [Alteromonadales bacterium TW-7] Length = 244 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 66/230 (28%), Gaps = 18/230 (7%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 G + + + ++ G + + Sbjct: 12 AGFSAPTFSSASEHSPSKEATQETAIGLGTGAIIGGVVGGPIGAFIGAFAGGLIGDAKVA 71 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 L +++ K++ D ++ + + + + + L Sbjct: 72 DNKLDEQQRALAVMKQKTNDYQHVLN------HNNLLEQQLEVLAQQNEQLTQSQINNLL 125 Query: 235 PM---FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 M F SS P L ++ +L + + + + G D + N+ LS Sbjct: 126 AMTVQFKTGSSTIAPHFAKQLDQLVVLLNNQPQLALDLSGFADQR---GDEQANFLLSKK 182 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDIL 337 R + L+K GVS R+S F S+ + N RR+ + Sbjct: 183 RVNAVQSYLIKHGVSHKRLST-QAFGEQHTLANSNTIED-NFFDRRVTLT 230 >gi|328676441|gb|AEB27311.1| 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor [Francisella cf. novicida Fx1] Length = 207 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + + F S + L K + L + I + G+TD + N+ Sbjct: 70 MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 L RA + Y L+ V++D+I +S + + Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161 >gi|328675516|gb|AEB28191.1| 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor [Francisella cf. novicida 3523] Length = 209 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + + F S + L K + L + I + G+TD + N+ Sbjct: 70 MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 L RA + Y L+ V++D+I +S + + Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161 >gi|282159136|gb|ADA78527.1| peptidoglycan-associated lipoprotein, OmpA family [Francisella tularensis subsp. tularensis NE061598] Length = 206 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + + F S + L K + L + I + G+TD + N+ Sbjct: 69 MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 125 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 L RA + Y L+ V++D+I +S + + Sbjct: 126 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 160 >gi|208780419|ref|ZP_03247760.1| OmpA family protein [Francisella novicida FTG] gi|208743787|gb|EDZ90090.1| OmpA family protein [Francisella novicida FTG] Length = 201 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + + F S + L K + L + I + G+TD + N+ Sbjct: 64 MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 120 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 L RA + Y L+ V++D+I +S + + Sbjct: 121 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 155 >gi|187931257|ref|YP_001891241.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp. mediasiatica FSC147] gi|187712166|gb|ACD30463.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp. mediasiatica FSC147] Length = 207 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + + F S + L K + L + I + G+TD + N+ Sbjct: 70 MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 L RA + Y L+ V++D+I +S + + Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161 >gi|254373811|ref|ZP_04989294.1| hypothetical protein FTDG_01595 [Francisella novicida GA99-3548] gi|151571532|gb|EDN37186.1| hypothetical protein FTDG_01595 [Francisella novicida GA99-3548] Length = 207 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + + F S + L K + L + I + G+TD + N+ Sbjct: 70 MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 L RA + Y L+ V++D+I +S + + Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161 >gi|134302256|ref|YP_001122225.1| OmpA family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|254369037|ref|ZP_04985050.1| hypothetical protein FTAG_00877 [Francisella tularensis subsp. holarctica FSC022] gi|134050033|gb|ABO47104.1| OmpA family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|157121958|gb|EDO66128.1| hypothetical protein FTAG_00877 [Francisella tularensis subsp. holarctica FSC022] Length = 207 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + + F S + L K + L + I + G+TD + N+ Sbjct: 70 MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 L RA + Y L+ V++D+I +S + + Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161 >gi|56707951|ref|YP_169847.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] gi|110670422|ref|YP_666979.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp. tularensis FSC198] gi|118496967|ref|YP_898017.1| OmpA family peptidoglycan-associated lipoprotein [Francisella tularensis subsp. novicida U112] gi|194324196|ref|ZP_03057970.1| OmpA family protein [Francisella tularensis subsp. novicida FTE] gi|224457032|ref|ZP_03665505.1| OmpA family peptidoglycan-associated lipoprotein [Francisella tularensis subsp. tularensis MA00-2987] gi|254370440|ref|ZP_04986445.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254372337|ref|ZP_04987828.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp. novicida GA99-3549] gi|254874755|ref|ZP_05247465.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604443|emb|CAG45475.1| Peptidoglycan-associated lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320755|emb|CAL08858.1| Peptidoglycan-associated lipoprotein [Francisella tularensis subsp. tularensis FSC198] gi|118422873|gb|ABK89263.1| peptidoglycan-associated lipoprotein, OmpA family [Francisella novicida U112] gi|151568683|gb|EDN34337.1| hypothetical protein FTBG_00207 [Francisella tularensis subsp. tularensis FSC033] gi|151570066|gb|EDN35720.1| peptidoglycan-associated lipoprotein [Francisella novicida GA99-3549] gi|194321643|gb|EDX19127.1| OmpA family protein [Francisella tularensis subsp. novicida FTE] gi|254840754|gb|EET19190.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp. tularensis MA00-2987] Length = 207 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + + F S + L K + L + I + G+TD + N+ Sbjct: 70 MNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 L RA + Y L+ V++D+I +S + + Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161 >gi|262199615|ref|YP_003270824.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262082962|gb|ACY18931.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 342 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 10/209 (4%) Query: 137 SQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLA 196 Q L D + + + + + + + + D Sbjct: 130 GQPEAPPPARLAPDRDDDGVADEDDACPDRMEDIDGFEDLDGCPDIDDDRDQVLDIADGC 189 Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + ++G + VL L+ ++ +F +S + V+ + Sbjct: 190 RLAPENINGYRDGDGCPDVLPPE-----LVELVPAPRALLFRRSGDALRTRSEAVVDHLA 244 Query: 257 EVLAHSTEVISI-RGHTDASPFRNIARDN-WRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 ++L V + GH D + D LSL RA + + L++ GVS R+ Sbjct: 245 DLLERHPSVRIVIVGHVDPGELDDEDADAEHTLSLRRAETVREALIRRGVSVRRLEVWDA 304 Query: 315 FAHHRLKIASDP--MNSANRRIDILVEDR 341 A + NRR+ + V Sbjct: 305 AAEF-PLSEGSSSHERARNRRVTVRVLRP 332 >gi|317475717|ref|ZP_07934976.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA] gi|316908100|gb|EFV29795.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA] Length = 391 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 6/135 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 P + ++++ ++A S L A + ET +I T Sbjct: 235 PQLISALELSAMQQQIAEMAAANQQLESALTAAQNRPVEVAETEVVVTDPNI--APRTVF 292 Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ P ++ + + + + ++ G+ D+ N LSL RA + Sbjct: 293 FNIGSAEVSPREVMNISYLAKQMQEFPNATYTVNGYADS--ATGTPEFNKELSLKRAQAV 350 Query: 296 YQVLMK-SGVSEDRI 309 VL+K G+S DR+ Sbjct: 351 VDVLVKDYGISADRL 365 >gi|237743864|ref|ZP_04574345.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|229432895|gb|EEO43107.1| conserved hypothetical protein [Fusobacterium sp. 7_1] Length = 232 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 24/172 (13%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 K+++ ++ + +S + D +G+ + I I D+ +F+ Sbjct: 46 QELRKKEEIIEGFTGLKKNIISKIQKDFEERGIKVDLDPQTGTIKIDDK---ILFNTGEY 102 Query: 243 IPLPETIVVLQKI----------GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + PE L + E + I I GHTD N LS RA Sbjct: 103 LLKPEGKKYLNEFVPIYINLLLNDEQVKKELSQIIIEGHTDDV---GSYIYNMELSQKRA 159 Query: 293 YSAYQVLMK-----SGVSE-DRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 + + + G E R +G ++ ++ + + +RR++ Sbjct: 160 FEVIKYIYDEMPNFKGKEELKRYITANGRSNIKVLRDNSGNIDRDKSRRVEF 211 >gi|226358108|ref|YP_002787847.1| OmpA family protein [Deinococcus deserti VCD115] gi|226319751|gb|ACO47745.1| putative OmpA family protein [Deinococcus deserti VCD115] Length = 200 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 8/160 (5%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 A + R + ++ + +L + MF +++ Sbjct: 39 QAGWEQVRYRKAQDAVAQAVRKARLPARPLLLLPGQRNDPPGAQRWVFSSQRMFVGDTAV 98 Query: 244 PLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL- 299 PE L VL + I GHT S R W LS RA + + Sbjct: 99 LTPEGQSALVAFARVLRAQGKHWKRVRIEGHTQTSRPNTPER--WGLSAGRASAVAEAFY 156 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 +K GVS +R+ ++ + N R++ILVE Sbjct: 157 LKGGVSPNRL-AVAARGGQTP-YDGRKFDVRNERVEILVE 194 >gi|167626685|ref|YP_001677185.1| OmpA family peptidoglycan-associated lipoprotein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596686|gb|ABZ86684.1| peptidoglycan-associated lipoprotein, OmpA family [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 209 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 26/131 (19%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + + F S + L K + L + I + G+TD + N+ Sbjct: 70 MDINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------------SDP------M 327 L RA + Y L+ V++D+I +S + + +D Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAAEPTQFYDEFCTDGVNDTCSYKASE 185 Query: 328 NS--ANRRIDI 336 + +RR +I Sbjct: 186 KAFYLDRRTEI 196 >gi|241667260|ref|ZP_04754838.1| OmpA family peptidoglycan-associated lipoprotein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875811|ref|ZP_05248521.1| peptidoglycan-associated lipoprotein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254841832|gb|EET20246.1| peptidoglycan-associated lipoprotein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 208 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + + F S + L K + L + I + G+TD + N+ Sbjct: 69 MDINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 125 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 L RA + Y L+ V++D+I +S + + Sbjct: 126 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 160 >gi|171060501|ref|YP_001792850.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6] gi|170777946|gb|ACB36085.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6] Length = 182 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ + FD + + V++ G+ LA + + I G+ D N L Sbjct: 75 KQRSVFFDFDEFVIRTQDRPVVELHGKYLASTPALKVVIEGNADER---GSREYNLALGN 131 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 RA + Q G ++ ++ IS + R A + + NRR D+ Sbjct: 132 KRAQAVVQSFKLLGAADGQMEAIS-YGEERPMDAGHDEAAWAKNRRADV 179 >gi|86131085|ref|ZP_01049684.1| OmpA family protein [Dokdonia donghaensis MED134] gi|85818496|gb|EAQ39656.1| OmpA family protein [Dokdonia donghaensis MED134] Length = 278 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 28/164 (17%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 A+ +K L++ + + + + +F + Sbjct: 127 PKEAIAEEKELEETKDRYKTFEDEPIVKGDRILLK-----------------NILFKTNY 169 Query: 242 SIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR-----LSLDRAYSA 295 S ++ L K+ + LA E+ I+GH N + LS RA Sbjct: 170 SYIHGKSRKDLNKLAKYLAAHPEIIFKIQGHVCCV-DHGRDGINLKTGKRNLSEARAKFI 228 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 Y L GV++ R+ + GF DP + R++ILV Sbjct: 229 YDYLADHGVAKKRM-RYQGFGSRFPL-GGDPKDDK--RVEILVT 268 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 8/114 (7%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLS 288 D+ + F+ S + L++ L E ISI G+ D A +NW LS Sbjct: 8 DKTHETFFETDKSNLVAIENAKLERFITSLPLDKIEDISIYGYCDDR--GTDAYNNW-LS 64 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAH---HRL-KIASDPMNSANRRIDILV 338 +RA + Q + G+++ I G RL + S+ + NR+++I+V Sbjct: 65 QERANTIKQKFVDRGIADSIIKNSDGKGELLLTRLDDVGSEVQRTLNRKVEIIV 118 >gi|183219562|ref|YP_001837558.1| putative MotB protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909704|ref|YP_001961259.1| endoflagellar motor protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774380|gb|ABZ92681.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777984|gb|ABZ96282.1| Putative MotB protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 242 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 16 IIKKKV---AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPF 72 + K+ ++ + W + YAD +T+L+ F++++ ++ D + + Sbjct: 1 MRKRSRFVSREEEHVESHDRWLLTYADMITLLLGLFIILYAVSKVDSKRLNEVAKDIKRG 60 Query: 73 GKNLMTASKGIFDEQNPPERSS 94 +++ I D + Sbjct: 61 FGLNVSSIGVILDGGSGILEDD 82 >gi|150007308|ref|YP_001302051.1| outer membrane protein OmpA [Parabacteroides distasonis ATCC 8503] gi|255014067|ref|ZP_05286193.1| outer membrane protein OmpA [Bacteroides sp. 2_1_7] gi|262382119|ref|ZP_06075257.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B] gi|42718022|gb|AAS38436.1| outer membrane protein A [Parabacteroides distasonis ATCC 8503] gi|149935732|gb|ABR42429.1| outer membrane protein OmpA [Parabacteroides distasonis ATCC 8503] gi|262297296|gb|EEY85226.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B] Length = 381 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 12/151 (7%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL-ISIIDQRNTPMFDKSSSIPLPET 248 L DL +I+S L + + V + + + N F +S+ Sbjct: 236 ALLNDLNGQINS-LRAANDELSKRPVSCPECQETVTEVVNNYVDNVVYFRINSAKIDKNQ 294 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSED 307 + + E + ++ I + G+ D + N LS RA + + L+ K G+S Sbjct: 295 QINIYNTAEFMKNNNAPIKVVGYADKK--TGTSDYNMGLSEKRARAVAKELIDKYGISSS 352 Query: 308 RISKISGFA-HHRLKIASDPMNSANRRIDIL 337 +I I + + R+ I+ Sbjct: 353 QI-TIEWRGSDEQPYGENSWN-----RVVIM 377 >gi|229495751|ref|ZP_04389479.1| outer membrane protein HMP [Porphyromonas endodontalis ATCC 35406] gi|229317325|gb|EEN83230.1| outer membrane protein HMP [Porphyromonas endodontalis ATCC 35406] Length = 398 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 13/154 (8%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI----LISIIDQRNTPMFDKSSSI 243 + DL +I+S L A+ + V + + F S Sbjct: 251 DMDLINDLNGQINS-LRAENAELAKRPVSCPECPEVVAPETKVVAGLSEKAITFKFDSDK 309 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 P +VL +I + + S + I++ G D A N LS RA + +L Sbjct: 310 LTPNQEIVLYEIAKFVKESNQPITVIGFAD---VTGNANYNLALSERRAKAVANILTTQY 366 Query: 304 VSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + + + N R+ I+ Sbjct: 367 DVPSDMINVEWQGETEQFDT----RAWN-RVVIV 395 >gi|332885102|gb|EGK05354.1| hypothetical protein HMPREF9456_02853 [Dysgonomonas mossii DSM 22836] Length = 401 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 10/117 (8%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNW 285 + + N F+ S PE+ L KI +L ++T I G+TDA A N Sbjct: 275 ELCELFNNIYFEFDKSDIRPESNETLDKIANILNNNTAKKYLITGYTDAR---GSAEYNI 331 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFA---HHRLKIASDPMNSANRR--IDIL 337 LS RA S + L GV D I K G + S + +R+ ++I+ Sbjct: 332 GLSRRRAASVIKALEDRGVPTD-ILKSRGVGKKISYAPVSESHIVREGDRKVTVEII 387 >gi|269123085|ref|YP_003305662.1| YadA domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268314411|gb|ACZ00785.1| YadA domain protein [Streptobacillus moniliformis DSM 12112] Length = 2075 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 16/173 (9%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + L ++ + + +L + +S L + + + Sbjct: 1914 DGINKKLEEQNNKLIAQNNKLNEKRGDLSKELKE-----LKDKISVIEKIKMNEDDLYTL 1968 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSL 289 + +L+ I L + + I G+TD + N L L Sbjct: 1969 DGYRL---GIHELTKSQEEMLKNIVRELNENYKNRKIYITGYTDNV---SGENLNLELGL 2022 Query: 290 DRAYSAYQVLMKSGVSED-RISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 RA + L + G+ I K+S ++ + + N NRR++I + Sbjct: 2023 KRANVVAKKLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVEIELR 2075 >gi|255534155|ref|YP_003094527.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366] gi|255347139|gb|ACU06465.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366] Length = 568 Score = 61.9 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 4/76 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 +D S P+ +L + V++ + I + HTD+ N RLS RA +A Sbjct: 488 YDFDKSNIRPDAGRILDNLLNVMSQNPTLKIELSSHTDSR---GKDAYNLRLSQQRAEAA 544 Query: 296 YQVLMKSGVSEDRISK 311 L+ GV+ DR+ Sbjct: 545 VNYLVGKGVARDRMVA 560 >gi|323136170|ref|ZP_08071252.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242] gi|322398244|gb|EFY00764.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242] Length = 288 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 70/225 (31%), Gaps = 36/225 (16%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 S RD +K + + + E+ +++ + L +A + L Sbjct: 40 SQFRDPDKVSRKEYESIVRERDKLEKEVRELREQLKRLANRPVETYLAAVANQRERILKD 99 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + + ++ + +F SS P+ +++ I L Sbjct: 100 LQSKLKADFPDLQVVISEEMDALRFK-GDGLFKTGSSELRPDKRRIVESIATRLGEVLPC 158 Query: 266 IS----------------------IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302 + + GHTD+ N LS +RA + + K Sbjct: 159 YTLGPRSSWNSRCNAAGAVIEAVLVEGHTDSD---GQDNSNITLSTNRANETFFAMTKHE 215 Query: 303 ----GVSEDR---ISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 DR + ++G+ R + NRRID+ + Sbjct: 216 PALVDFRNDRAQPVLSVAGYGRMRPVADNATQEGKATNRRIDLRI 260 >gi|91201946|emb|CAJ75006.1| similar to H+-driven flagellar motor component MotB [Candidatus Kuenenia stuttgartiensis] Length = 236 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 16/148 (10%), Positives = 38/148 (25%), Gaps = 2/148 (1%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLM--TAS 80 W + Y D +T+L+ FF+++ ++ + D K + S Sbjct: 4 EAPKGPETPGWLLTYGDMVTLLVTFFVMLISLSTINVDKYKEAMKQVQASIGGTHVLEGS 63 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 K D+ + ++D + + + + Sbjct: 64 KQPLDKDAKSDIVDIKEVDFPPTRMQELTETEKFVEDKEWYQYLNDFVTKSELSNYIDIE 123 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSIN 168 E + + + L N Sbjct: 124 EIKVGYIVKIPVDVCFEKGESILTWEAN 151 >gi|260171997|ref|ZP_05758409.1| major outer membrane protein OmpA [Bacteroides sp. D2] gi|315920310|ref|ZP_07916550.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313694185|gb|EFS31020.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 395 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 5/135 (3%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSI 243 ++ + + ++ + + + ++I+ T F S Sbjct: 244 ELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRTVFFKIGSDK 303 Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ + L + + S +I G+ D+ N +LSL+RA +L+K Sbjct: 304 LSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQVVKDLLVKK 361 Query: 303 -GVSEDRISKISGFA 316 G+S DR+ +G Sbjct: 362 YGISADRLKVAAGGG 376 >gi|256839597|ref|ZP_05545106.1| outer membrane protein OmpA [Parabacteroides sp. D13] gi|298375294|ref|ZP_06985251.1| immunoreactive 42 kDa antigen PG33 [Bacteroides sp. 3_1_19] gi|301310692|ref|ZP_07216631.1| immunoreactive 42 kDa antigen PG33 [Bacteroides sp. 20_3] gi|256738527|gb|EEU51852.1| outer membrane protein OmpA [Parabacteroides sp. D13] gi|298267794|gb|EFI09450.1| immunoreactive 42 kDa antigen PG33 [Bacteroides sp. 3_1_19] gi|300832266|gb|EFK62897.1| immunoreactive 42 kDa antigen PG33 [Bacteroides sp. 20_3] Length = 381 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 12/151 (7%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL-ISIIDQRNTPMFDKSSSIPLPET 248 L DL +I+S L + + V + + + N F +S+ Sbjct: 236 ALLNDLNGQINS-LRAANDELSKRPVSCPECQETVTEVVNNYVDNVVYFRINSAKIDKNQ 294 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSED 307 + + E + ++ I + G+ D + N LS RA + + L+ K G+S Sbjct: 295 QINIYNTAEFMKNNNAPIKVVGYADKK--TGTSDYNMGLSEKRARAVAKELIDKYGISSS 352 Query: 308 RISKISGFA-HHRLKIASDPMNSANRRIDIL 337 +I I + + R+ I+ Sbjct: 353 QI-TIEWRGSDEQPYGENSWN-----RVVIM 377 >gi|160882396|ref|ZP_02063399.1| hypothetical protein BACOVA_00345 [Bacteroides ovatus ATCC 8483] gi|156112209|gb|EDO13954.1| hypothetical protein BACOVA_00345 [Bacteroides ovatus ATCC 8483] Length = 395 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 5/135 (3%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSI 243 ++ + + ++ + + + ++I+ T F S Sbjct: 244 ELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRTVFFKIGSDK 303 Query: 244 PLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ + L + + S I G+ D+ N +LSL+RA +L+K Sbjct: 304 LSPQEEMNLSYLASKIKESPNTTYTINGYADS--ATGTPAFNQKLSLERAQVVKDLLVKK 361 Query: 303 -GVSEDRISKISGFA 316 G+S DR+ +G Sbjct: 362 YGISADRLKVAAGGG 376 >gi|283782103|ref|YP_003372858.1| OmpA/MotB domain-containing protein [Pirellula staleyi DSM 6068] gi|283440556|gb|ADB18998.1| OmpA/MotB domain protein [Pirellula staleyi DSM 6068] Length = 261 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 45/138 (32%), Gaps = 7/138 (5%) Query: 23 IDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDD-DTKKAIEQYFNPFGKNLMTASK 81 +D P + W + + D M++L+ FF+++ ++ D + + + + S Sbjct: 4 EEDPPAGIPEWVVTFGDMMSLLLTFFILLASMSEIKQNDKFQGVADSMHEQFGYDSSMSH 63 Query: 82 GIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSE 141 P E S +N ++ + G K ++ + + Sbjct: 64 V------PGEMSPRNSSMAAMALTGRAKRAKVVQGGVKSKGTTGENQHVRIVRPGDRTTI 117 Query: 142 HCKNSLTRDSEKGKDLCK 159 + DS + + Sbjct: 118 GTVVYFSEDSATLSEDAE 135 Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 71/236 (30%), Gaps = 14/236 (5%) Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 D G + + + + S + + + + S++ Sbjct: 4 EEDPPAGIPEWVVTFGDMMSLLLTFFILLASMSEIKQNDKFQGVADSMHEQFGYDSSMSH 63 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 P S +A+ + + AK + + + V I Sbjct: 64 VPGEMSPRNSSMAAMALTGRAK---RAKVVQGGVKSKGTTGENQHVRIVRPGDRTTI--- 117 Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRL 287 F + S+ + V L E A + I +RGHT +DNW L Sbjct: 118 --GTVVYFSEDSATLSEDAEVDLLGAAETFAGKPQKIELRGHTSRGTPAADSVFKDNWEL 175 Query: 288 SLDRAYSAYQVLMKSG-VSEDRISKISGFAHHRLKIAS-DPMN-SANRRIDILVED 340 + R+ + VL+ + RI +IS DP N R+++ + + Sbjct: 176 AYKRSLAVMHVLVDRMKIDPKRI-RISVAGPFEPVHTGIDPEKLKQNPRVEVFLLE 230 >gi|218531252|ref|YP_002422068.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4] gi|218523555|gb|ACK84140.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4] Length = 296 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 65/228 (28%), Gaps = 41/228 (17%) Query: 149 RDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST--LSGL 206 +D + + ++ RK+R L +S+ Sbjct: 44 KDDQTVPLPEYRQIERERDRLATENADLSREVARLEDELRKERTNRLQTYLSAVSSERDR 103 Query: 207 VADNIVKGVLFETTRTGILISII----DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 + + ++ + ++SI + +F + V+ I L Sbjct: 104 ILRTLRDRLVVDFPELENIVSIETGALRFKGDGLFKTDRWQLAEDKRRVVTAIATRLNEL 163 Query: 263 TEVI----------------------SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 I GHTDA R N+ LS +RA ++ Sbjct: 164 LPCYTFGKAARWQASCNAAGAVIEAVQIEGHTDA---SGQDRSNFSLSTERAVETLFAMI 220 Query: 301 KS--GVSEDR------ISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + ++R + +SG+ R + NRRID+ + Sbjct: 221 GREPALLDNRNSAGQPVLSVSGYGRLRPVADNTSERGRATNRRIDLRI 268 >gi|237719069|ref|ZP_04549550.1| major outer membrane protein OmpA [Bacteroides sp. 2_2_4] gi|229451448|gb|EEO57239.1| major outer membrane protein OmpA [Bacteroides sp. 2_2_4] Length = 395 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 5/135 (3%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSI 243 ++ + + ++ + + + ++I+ T F S Sbjct: 244 ELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRTVFFKIGSDK 303 Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ + L + + S +I G+ D+ N +LSL+RA +L+K Sbjct: 304 LSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQVVKDLLVKK 361 Query: 303 -GVSEDRISKISGFA 316 G+S DR+ +G Sbjct: 362 YGISADRLKVAAGGG 376 >gi|299148152|ref|ZP_07041214.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_23] gi|298512913|gb|EFI36800.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_23] Length = 395 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 5/135 (3%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSI 243 ++ + + ++ + + + ++I+ T F S Sbjct: 244 ELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRTVFFKIGSDK 303 Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ + L + + S +I G+ D+ N +LSL+RA +L+K Sbjct: 304 LSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQVVKDLLVKK 361 Query: 303 -GVSEDRISKISGFA 316 G+S DR+ +G Sbjct: 362 YGISADRLKVAAGGG 376 >gi|254418948|ref|ZP_05032672.1| OmpA family protein [Brevundimonas sp. BAL3] gi|196185125|gb|EDX80101.1| OmpA family protein [Brevundimonas sp. BAL3] Length = 385 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 38/116 (32%), Gaps = 7/116 (6%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDN 284 + + FD S E V+ + + + I G+TD A N Sbjct: 272 VKPAAREFVVYFDWDRSDLTAEARSVVTQAATYAKSGAATRVLIVGYTDT---SGSAAYN 328 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILV 338 LS R+ + L+ GV+ + + G L + NRR I + Sbjct: 329 LGLSNRRSRTVADALVAQGVNGG-VIALDGKGETALAKPTADGVREPLNRRATINI 383 >gi|15966491|ref|NP_386844.1| peptidoglycan-associated lipoprotein precursor [Sinorhizobium meliloti 1021] gi|307300472|ref|ZP_07580252.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti BL225C] gi|307318337|ref|ZP_07597772.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti AK83] gi|22653891|sp|Q926C3|OMP16_RHIME RecName: Full=Outer membrane lipoprotein omp16 homolog; Flags: Precursor gi|15075762|emb|CAC47317.1| Peptidoglycan-associated lipoprotein [Sinorhizobium meliloti 1021] gi|306896019|gb|EFN26770.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti AK83] gi|306904638|gb|EFN35222.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti BL225C] Length = 176 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD S+ + L + + LA I+I GH D N L R Sbjct: 67 DRIFFDTDSTSIRADAQATLDRQAQWLAKYPNYGITIEGHADER---GTREYNLALGARR 123 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + L+ GV +R+ IS + + S NRR Sbjct: 124 AAATRDYLVSRGVPGNRMRTIS-YGKEKPVAVCDDISCWSQNRR 166 >gi|293369508|ref|ZP_06616087.1| OmpA family protein [Bacteroides ovatus SD CMC 3f] gi|292635393|gb|EFF53906.1| OmpA family protein [Bacteroides ovatus SD CMC 3f] Length = 390 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 5/135 (3%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSI 243 ++ + + ++ + + + ++I+ T F S Sbjct: 239 ELELNQMRNQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDTNIAPRTVFFKIGSDK 298 Query: 244 PLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P+ + L + + S +I G+ D+ N +LSL+RA +L+K Sbjct: 299 LSPQEEMNLSYLASKIKESPNATYTINGYADS--ATGTPAFNQKLSLERAQVVKDLLVKK 356 Query: 303 -GVSEDRISKISGFA 316 G+S DR+ +G Sbjct: 357 YGISADRLKVAAGGG 371 >gi|149912933|ref|ZP_01901467.1| OmpA/MotB [Roseobacter sp. AzwK-3b] gi|149813339|gb|EDM73165.1| OmpA/MotB [Roseobacter sp. AzwK-3b] Length = 512 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 54/165 (32%), Gaps = 12/165 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + ++ + A I+ S + + + + V + + + F+ Sbjct: 355 DQAPEEIEINAQGDRFANAITQAGSEVGLEELQRMVALLSPLRRLTTTFR-------FEA 407 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ ++ +Q++ L S A N R++ RA + + Sbjct: 408 GSARLDAQSRSNVQQLARALEIGLYDARRLVFVGFSDGEGPAAGNRRIAEQRAEAVKTAV 467 Query: 300 MKSGVSE--DRIS-KISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + + + RI+ + + F D NRR+++ V Sbjct: 468 IAAAETANLSRITIETAAFGEAMPMACDDSEWGRQVNRRVEVWVR 512 >gi|189423395|ref|YP_001950572.1| OmpA/MotB domain protein [Geobacter lovleyi SZ] gi|189419654|gb|ACD94052.1| OmpA/MotB domain protein [Geobacter lovleyi SZ] Length = 201 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 43/125 (34%), Gaps = 10/125 (8%) Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHT 272 + + T L I T F +SS L+KI + + + G+T Sbjct: 80 QPDVVTVTPRNELPEIKGLLGTVHFQLNSSRLSQFEQGNLEKISRDIPA-GNAVDVTGYT 138 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332 N +LS RA + VL GV I I G + D NR Sbjct: 139 CTI---GTDDYNKKLSFSRAEAVATVLKAKGV---HIGTIEGKGKCCP-ASQD--KQQNR 189 Query: 333 RIDIL 337 R++I+ Sbjct: 190 RVEII 194 >gi|332300803|ref|YP_004442724.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] gi|332177866|gb|AEE13556.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] Length = 387 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 12/141 (8%) Query: 201 STLSGLVADNIVKGVLFETTRTGIL--ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 S+L A+ + V + ++ N F S+ ++ + E Sbjct: 252 SSLRAQNAELSKRPVSCPECPDALAPATAVNVIENVVAFRIGSAKIDKNQMINVYNSAEA 311 Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAH 317 + I I G+ D N LS RA + L+ + GV+ D I I Sbjct: 312 AKANGGKIYIVGYADEQ--TGTPEINMSLSERRAEAVKNALINNYGVNPDNIV-IDFKGD 368 Query: 318 H-RLKIASDPMNSANRRIDIL 337 + ++ R+ I+ Sbjct: 369 TVQPFATNEWN-----RVAII 384 >gi|162448918|ref|YP_001611285.1| ompA-family exported protein [Sorangium cellulosum 'So ce 56'] gi|161159500|emb|CAN90805.1| ompA-family exported protein [Sorangium cellulosum 'So ce 56'] Length = 195 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 7/105 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ E L + + + + GH D N L RA Sbjct: 93 FAFDSTSIEGEAAGALDALARCFVSGPLKGKGMKLIGHADPR---GETEYNLGLGQKRAG 149 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 S + L K G+ + RI S + + +R++DIL+ Sbjct: 150 SVAEYLGKKGLDQGRI-ATSSKGEFEATGTDEEGWARDRKVDILL 193 >gi|144898283|emb|CAM75147.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Magnetospirillum gryphiswaldense MSR-1] Length = 157 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 5/107 (4%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + + +V+ + V + +++ G TD N LS RA Sbjct: 49 QIYFDTNKTDIDSRGRMVVNSVAHVATNNGLTRVTVIGKTDRV---GSTAGNVALSQRRA 105 Query: 293 YSAYQVLMKSGVSEDRI-SKISGFAHHRLKIASDPMNSANRRIDILV 338 L+ +GV DRI + +G A + A+D NR +D+ V Sbjct: 106 DQVRDALIAAGVPADRIDTSWTGEARQAVSTANDAEEQRNRVVDVTV 152 >gi|149184887|ref|ZP_01863204.1| hypothetical protein ED21_17577 [Erythrobacter sp. SD-21] gi|148830998|gb|EDL49432.1| hypothetical protein ED21_17577 [Erythrobacter sp. SD-21] Length = 242 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 37/184 (20%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + + L + + L+ L +G+ E ++ + D +FDK Sbjct: 43 QTKTEELTGANRTRAEILNDLQQSLKDRGLQVEIDTKTGVLRLPDD---VLFDKGQWELT 99 Query: 246 PETIVVLQKIGEVLAHSTEVI------------------SIRGHTDASPFRNIARDNWRL 287 + K+ + + GHTD+ +N+ L Sbjct: 100 ERGQAAISKVASAMVEVLPCYTASDLCEGERSPHLIDAVFVEGHTDSDVMSGG-MNNYGL 158 Query: 288 SLDRAYSAYQVLMKS------------GVSEDR-ISKISGFAHHRLKIASDPMNS--ANR 332 S+ RA + + +L ++ G I +SG+ R D + NR Sbjct: 159 SVRRAETTFTMLQRNQPALRGFLNRPAGEDGSAPILSLSGYGPDRPVDRGDSEEAKKRNR 218 Query: 333 RIDI 336 RID+ Sbjct: 219 RIDL 222 >gi|288803192|ref|ZP_06408626.1| conserved hypothetical protein [Prevotella melaninogenica D18] gi|288334233|gb|EFC72674.1| conserved hypothetical protein [Prevotella melaninogenica D18] Length = 387 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 63/166 (37%), Gaps = 20/166 (12%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 ++ + RLQD ++ + + L V+ V ++ + F+ Sbjct: 238 TQHQAALDALNARLQDAEEENARLRNELANQKPVETVSESVK------QLVTTPVSVFFE 291 Query: 239 KS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + S+I + +V +Q + + + + + G+ D+ A N +LS RA Sbjct: 292 INQSTIASQKDLVNVQALAKYAKDNNNNLLVTGYADS--ATGSADYNQKLSERRATVVAN 349 Query: 298 VLMKSGVSEDRISKISGFA--HH-RLKIASDPMNSANRRIDILVED 340 L+K G+ ++I+ + G S NRR + + + Sbjct: 350 ELVKMGIENNKITTV-GKGGVETLSPI-------SFNRRATVQITE 387 >gi|154252498|ref|YP_001413322.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154156448|gb|ABS63665.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1] Length = 277 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 33/99 (33%), Gaps = 11/99 (11%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F PE V+ +++A +T +S+ GHTD + N L RA S Sbjct: 182 FGFDKYNLTPEAQSVID---QIVAETTGPLSVIGHTDT---SGSSAYNQALGQRRADSVS 235 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRR 333 L G + L + + NRR Sbjct: 236 NALTAQG---KELCSAVSRGETELAVQTGDGVREPLNRR 271 >gi|150397824|ref|YP_001328291.1| peptidoglycan-associated lipoprotein [Sinorhizobium medicae WSM419] gi|150029339|gb|ABR61456.1| Peptidoglycan-associated lipoprotein [Sinorhizobium medicae WSM419] Length = 176 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD S+ + L + + LA ++I GH D N L R Sbjct: 67 DRIFFDTDSTSIRADAQTTLDRQAQWLAKYPNYAVTIEGHADER---GTREYNLALGARR 123 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + L+ GV +R+ IS + + S NRR Sbjct: 124 AAATRDYLVSRGVPGNRMRTIS-YGKEKPVAVCDDISCWSQNRR 166 >gi|322641772|gb|EFY38406.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] Length = 178 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 29/86 (33%), Gaps = 5/86 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLD 290 N FD + +L L + ++ GH D N L Sbjct: 69 NNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADER---GTPEYNISLGER 125 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFA 316 RA + L GVS D+IS +S + Sbjct: 126 RANAVKMYLQGKGVSADQISIVS-YG 150 >gi|326317265|ref|YP_004234937.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374101|gb|ADX46370.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 177 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 10/117 (8%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 + + F + + + + + + I G DA+ A N Sbjct: 69 RVVVAGSVVKFYFASGRADLTADAAPAIADVVRAVKDGNRRVVISGFHDAT---GDAVAN 125 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-KIASDPMNSANRRIDILVED 340 L+ RA + L+ +G EDRI + D + RR+++ ++ Sbjct: 126 AELARQRAQAVRDALVAAGAPEDRIEL------RKPELAQGDGNAAEARRVEVTLDA 176 >gi|307729365|ref|YP_003906589.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003] gi|307583900|gb|ADN57298.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003] Length = 242 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 41/124 (33%), Gaps = 17/124 (13%) Query: 232 RNTPMFDKS---SSIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWR 286 + +F LP L +I + V I++ GHTD N Sbjct: 123 ESDTLFPFGKSSRESMLPAAKARLDEIAARIRQHEHVSAITVVGHTDRL---GPESINGP 179 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--------NRRIDILV 338 LSL RA + L+ G+ I G + ++ +R + I V Sbjct: 180 LSLARANTVRDYLVAHGLDGS-IVLAKGVGSSEPRTHCAEHDARALIACLQEDRYVSITV 238 Query: 339 EDRQ 342 E R+ Sbjct: 239 EGRK 242 >gi|192288642|ref|YP_001989247.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1] gi|192282391|gb|ACE98771.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1] Length = 306 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285 NT FD S P+ LQ I + L EV I GHTDA DN Sbjct: 174 DLNTINFDLGSWDIPPDQAAKLQAIADGLNRAIQRNPREVFLIEGHTDAV---GNDTDNL 230 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA +A +L + GV + ++ G+ LKI + NRR+ I Sbjct: 231 SLSDRRAEAAAALLTQQFGVPAENLTS-QGYGEQYLKIQTQAPERQNRRVTI 281 >gi|126736793|ref|ZP_01752530.1| OmpA/MotB [Roseobacter sp. CCS2] gi|126713694|gb|EBA10568.1| OmpA/MotB [Roseobacter sp. CCS2] Length = 162 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 16/162 (9%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + R L +++ G + + + + + F SS Sbjct: 7 QAEGDARRAALVAEMARYDVGFEGELMGDMLGEMDENDRLSTTFR-------FRTGSSKL 59 Query: 245 LPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYSAYQVL--M 300 + +Q++ L + + G TD N RL+ RA + + + + Sbjct: 60 DERGRLDMQRLIAYLQRVPDGTEVTFVGFTDDV---GAFDANQRLAEQRAAAVMEEMRAI 116 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 G + +G+ + NRR+++ + + Sbjct: 117 TGGSINNVTMSTAGYGEIAPSACNISERGRGINRRVEVWISN 158 >gi|41349559|emb|CAF21861.1| major outer membrane protein [Pseudomonas putida] Length = 287 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 4/90 (4%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHT 272 V + + ++ FD S+ P + ++ + + + ++ GHT Sbjct: 197 NVTVDADGCPAVTEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHT 256 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 D+ N +LS RA + QVL Sbjct: 257 DSV---GPDAYNQKLSERRANAVKQVLTNQ 283 >gi|300867579|ref|ZP_07112229.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300334467|emb|CBN57399.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 982 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 74/200 (37%), Gaps = 12/200 (6%) Query: 115 IGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYF 174 G+ + + E + + + ++ ++ + + + +N+ E Sbjct: 762 TGNLPNQGLRAKAEKIAQATAPNLKVDNKIIAIDVPPDPASVAAEVKRVTAVLNQIEGVS 821 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + E+ + ++ A+KI+ ++ + ++ + + ++ + Sbjct: 822 ISSRYGERKVTVEGTVMQMTDAQKIAQSMKQVPG--------VQSVISTVKLNPLKITTR 873 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F+ S+ E V+ I E L + + I GH+D + N +L+ RA Sbjct: 874 IYFNVGSATLNSEYGEVIGNIKEFLKQYPQKHLKIIGHSDR---KGNLAINQQLARKRAE 930 Query: 294 SAYQVLMKSGVSEDRISKIS 313 + L++ GV R+ ++ Sbjct: 931 AVRVALVQQGVDPRRLQVVA 950 >gi|291447367|ref|ZP_06586757.1| secreted protein [Streptomyces roseosporus NRRL 15998] gi|291350314|gb|EFE77218.1| secreted protein [Streptomyces roseosporus NRRL 15998] Length = 215 Score = 61.5 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + +F K S+ + I E + I + G TD + LS Sbjct: 104 QAEVLFGKDSAKLSSAANARIAAIAEEIKKQNATKIRVFGFTDNL---GSSAHGDVLSKQ 160 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 RA + + VL K + +I G+ ++ NRR+++ +G Sbjct: 161 RADAVHGVLSKQ-LGPTVTYEIRGYGEQYPIASNSNEEGRKKNRRVEVSFPRGEG 214 >gi|239950069|gb|ACS36764.1| outer membrane protein P5 [Ornithobacterium rhinotracheale] Length = 301 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 6/83 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSL 289 + +FD + P L + + + + + G+TD N LS Sbjct: 221 SDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRI---GKDAANLTLSQ 277 Query: 290 DRAYSAYQVLMKSGVSEDRISKI 312 RA + ++ GV+ ++ + Sbjct: 278 KRAETVANYIVSKGVNPANVTAV 300 >gi|167572708|ref|ZP_02365582.1| ompA family protein [Burkholderia oklahomensis C6786] Length = 276 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 37/120 (30%), Gaps = 19/120 (15%) Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNW 285 +F S P L +I L + I + G+TD N Sbjct: 154 DYHLLFPFDKSALRDLLPSGRAELDRIAATLQQQYQHIRSVRVTGYTDRL---GTDEYNR 210 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---------SANRRIDI 336 +LSL RA + L G+ D I G A P + +RR+ I Sbjct: 211 QLSLARAETIRSYLTTRGLPGDLIVA-QGLGKADPVSAGCPAGRSSEAIACLAPDRRVRI 269 >gi|167565602|ref|ZP_02358518.1| ompA family protein [Burkholderia oklahomensis EO147] Length = 276 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 37/120 (30%), Gaps = 19/120 (15%) Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNW 285 +F S P L +I L + I + G+TD N Sbjct: 154 DYHLLFPFDKSALRDLLPSGRAELDRIAATLQQQYQHIRSVRVTGYTDRL---GTDEYNR 210 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---------SANRRIDI 336 +LSL RA + L G+ D I G A P + +RR+ I Sbjct: 211 QLSLARAETIRSYLTTRGLPGDLIVA-QGLGKADPVSAGCPAGRSSEAIACLAPDRRVRI 269 >gi|325103778|ref|YP_004273432.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] gi|324972626|gb|ADY51610.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145] Length = 706 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 42/114 (36%), Gaps = 12/114 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 + +D + P+ L KI ++ EV I H D+ N LS+ Sbjct: 579 NFDNIYYDLDRAEIRPDARPALDKIALIMLTHPEVSIITSSHCDSR---ASNDYNKLLSI 635 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRIDI 336 R SA L+ GV+ +RI + + RL S+ NRR + Sbjct: 636 RRGNSAKAYLVAKGVAANRIK-VEYYGKTRLTNRCYDGVPCSEEEQQMNRRTEF 688 >gi|241113057|ref|YP_002972892.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861265|gb|ACS58931.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 184 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 9/111 (8%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 I++ F + S+ P + L L + + ++G D A Sbjct: 68 ILNVGRRIYFKQDSATLDPVAMATLDNQAAWLNRNPSWLLKLQGFADD---SGSAAKMET 124 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334 LS RA +A L+ GV R+ G+ + R S NRR+ Sbjct: 125 LSQKRADAAMAYLVSKGVDARRMWA-KGYGNDREVRDC-TERSCKVQNRRV 173 >gi|297539675|ref|YP_003675444.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301] gi|297259022|gb|ADI30867.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301] Length = 191 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSL 289 + FD S E +++ + L T I +G+TD N L Sbjct: 82 SKRNVYFDFDSDAVKAEFRPLIEAHAKYLLAHTSAKVILQGNTDER---GTREYNLSLGQ 138 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDIL 337 R+ + + L GV + +I +S F + A D + NRR+D++ Sbjct: 139 RRSVAVKKSLNLLGVQDAQIETVS-FGEEKATEGCADDACSKQNRRVDVV 187 >gi|325278790|ref|YP_004251332.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324310599|gb|ADY31152.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712] Length = 366 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 10/110 (9%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 F +S++ PE + ++ L + +++ G+ D R N LS RA Sbjct: 261 NVFFKINSAVIRPEEAGKVDELAAYLQKNPAAQVTLTGYADVQ--TGNHRLNKTLSARRA 318 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILVEDR 341 + L G++ DRI+ S + + R+ I + Sbjct: 319 QAVADALTAKGIAADRITADS-QGDTVQPFATPEEN-----RVTICITAD 362 >gi|323529150|ref|YP_004231302.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001] gi|323386152|gb|ADX58242.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001] Length = 349 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 52/162 (32%), Gaps = 19/162 (11%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI-PLP 246 +KRL D+ + + + TT + + + FD + LP Sbjct: 191 AEKRLSDIQDNLRKSAESALQCKPAAAAPQSTTPQAVTLR---ADSLFRFDGGNDAAMLP 247 Query: 247 ETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 L + L T I I G+TD N LSL RA + + L GV Sbjct: 248 AGRRALDAVARRLTTVTALREIRITGYTDRL---GENAHNRSLSLQRAQTVARYLRARGV 304 Query: 305 SEDRISKISGFAHHRLKIASDPMN--------SANRRIDILV 338 + + G A + NRR++I + Sbjct: 305 TSP--IAVRGLASANPVAECRQSRRDELVQCLAPNRRVEIEL 344 >gi|220921480|ref|YP_002496781.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219946086|gb|ACL56478.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060] Length = 666 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNW 285 +T FD S P+ L I E + + EV I G+TDA DN Sbjct: 545 DIDTITFDSGSWQIAPDQARRLAVIAEAIGRAVQRNPQEVFLIEGYTDAV---GNDVDNL 601 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA VL + V + ++ G+ LK+ + + NRR+ + Sbjct: 602 SLSDRRAQEVATVLTRDFRVPPENLTT-QGYGEQYLKVNTQEASRENRRVTV 652 >gi|108762481|ref|YP_632884.1| OmpA family protein [Myxococcus xanthus DK 1622] gi|108466361|gb|ABF91546.1| OmpA family protein [Myxococcus xanthus DK 1622] Length = 386 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 17/113 (15%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI--------SIRGHTDASPFRNIARDNWRLS 288 F + L K ++ + + GHTD A +N LS Sbjct: 261 FASGQADIPATERGKLDKSHALIVDALTKYGRFASLRLYVMGHTDTV---GAAAENLDLS 317 Query: 289 LDRAYSAYQVLMKSGVSEDRI-SKISGFAHHRLKI--ASDPMNSANRRIDILV 338 + RA S K G+ R+ G + + + NRR + ++ Sbjct: 318 VRRAKSLAAYFRKKGL---RVPVYYEGLGEEAPAVATPDETAEAGNRRAEYII 367 >gi|294672796|ref|YP_003573412.1| OmpA family protein [Prevotella ruminicola 23] gi|294473078|gb|ADE82467.1| OmpA family protein [Prevotella ruminicola 23] Length = 384 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 R F ++ + ++ E L + E ++I G+ DA R N RL+ Sbjct: 282 RRDIFFAIGKTVIRKSEQQKVNEVVEYLNANPEAKVNITGYADA--GTGNDRINDRLAAG 339 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 RA + L K+GV+ RIS S A + +D R+ I++ Sbjct: 340 RADVVVKALKKAGVAASRISYDSKGARVQPFADNDSN-----RVSIVI 382 >gi|327396327|dbj|BAK13749.1| OmpA/MotB domain protein [Pantoea ananatis AJ13355] Length = 287 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 67/223 (30%), Gaps = 43/223 (19%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 T +K + ++ D + E L + + + +L ++ + L Sbjct: 49 TVPRDKYEQAVQTRDKTIVDLRAEIALLKQVDPLEQYMSQAAAARLNLLYQLRNNLKQSF 108 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI- 266 + V + +F +S + +++ + + L Sbjct: 109 PEL---PVDVIPEEGTLRFQ-----GEGLFTSNSFTLSDDKRKIVEALAKTLDSLLPCYT 160 Query: 267 ---------------------SIRGHTDASPFRNIARDNWRLSLDRA-------YSAYQV 298 I GHTD+ + N LS +RA +A Sbjct: 161 FSQSVGWNKSCNPSFAIIEAVQIEGHTDS---KGEDVYNLNLSTNRAITTFTSMLAAAPD 217 Query: 299 LMKS-GVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 L+ + + ++G+ R +D + NRRID+ + Sbjct: 218 LVAHFNMRSQPVLSVAGYGKMRPVKPNDTPQNMAMNRRIDLRI 260 >gi|254476621|ref|ZP_05090007.1| OmpA family protein [Ruegeria sp. R11] gi|214030864|gb|EEB71699.1| OmpA family protein [Ruegeria sp. R11] Length = 176 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 6/157 (3%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 LA + + A+ + + V + ++ D+ + F S Sbjct: 17 ALARESHAQEMQDAELCEAVFREYGVRSEVCNAPQPKPQPDRELTAQDRESHIFFLSGGS 76 Query: 243 IPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 P+ + + VL + + + GH+DA N RLS RA L Sbjct: 77 RLSPQMERQVVLLAGVLNTAPMKDACLRLTGHSDA---SGGRDANRRLSEQRAEVVAAAL 133 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + DR+ ++ G NRR+ I Sbjct: 134 RRRLDRGDRVEEVRGVGEETPLEGWPSTARENRRVSI 170 >gi|5689652|emb|CAB51905.1| OmpA protein [Bordetella petrii] Length = 152 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 4/73 (5%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYS 294 FD S PE +L ++ + I GHTD+ + N LS RA S Sbjct: 76 FFDFDKSTLKPEGRQLLDQVAQQAQGIDLETIIAVGHTDSI---GTEKYNQGLSERRAAS 132 Query: 295 AYQVLMKSGVSED 307 L+ GV Sbjct: 133 VKSYLVSKGVDPT 145 >gi|53717117|ref|YP_105939.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia mallei ATCC 23344] gi|238561376|ref|ZP_00442008.2| OmpA family protein [Burkholderia mallei GB8 horse 4] gi|52423087|gb|AAU46657.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei ATCC 23344] gi|238524569|gb|EEP88001.1| OmpA family protein [Burkholderia mallei GB8 horse 4] Length = 271 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 21/117 (17%) Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289 +F S P L +I L + I + G+TD N +LSL Sbjct: 153 LFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTDAYNRQLSL 209 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----------NRRIDI 336 RA + L G+ D I G ++ +RR+ I Sbjct: 210 ARAETIRAYLTTRGLPGDLIVA-QGLGKADPV-SNGCPAGRSAEAIACLAPDRRVRI 264 >gi|254474599|ref|ZP_05087985.1| OmpA/MotB [Ruegeria sp. R11] gi|214028842|gb|EEB69677.1| OmpA/MotB [Ruegeria sp. R11] Length = 518 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 14/166 (8%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + LA I++ + + + + + V + S F+ Sbjct: 361 DQAPERISMNAQGDRLANAIAAAGTEVPLEELQRLVNRLAGLQRLTTSFR-------FEP 413 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ P ++ +Q++ L S A N +++ RA S + Sbjct: 414 GSTRPDAQSRSNIQQLARALEAGAYDARELLFVGFSDGDGGAAANQSIAMKRAESVRDAV 473 Query: 300 MK----SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + + + I + F D NRR+++ V Sbjct: 474 IAAAETANIDRTEI-AVEAFGEALPMACDDQRWGRQVNRRVEVWVR 518 >gi|239943905|ref|ZP_04695842.1| putative secreted protein [Streptomyces roseosporus NRRL 15998] gi|239990359|ref|ZP_04711023.1| putative secreted protein [Streptomyces roseosporus NRRL 11379] Length = 219 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 7/115 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLD 290 + +F K S+ + I E + I + G TD + LS Sbjct: 108 QAEVLFGKDSAKLSSAANARIAAIAEEIKKQNATKIRVFGFTDNL---GSSAHGDVLSKQ 164 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQG 343 RA + + VL K + +I G+ ++ NRR+++ +G Sbjct: 165 RADAVHGVLSKQ-LGPTVTYEIRGYGEQYPIASNSNEEGRKKNRRVEVSFPRGEG 218 >gi|126738442|ref|ZP_01754147.1| OmpA domain protein [Roseobacter sp. SK209-2-6] gi|126720241|gb|EBA16947.1| OmpA domain protein [Roseobacter sp. SK209-2-6] Length = 518 Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 53/164 (32%), Gaps = 12/164 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + L+ I ++ L D + + V + S F+ Sbjct: 361 DQAPERISMNAQGDRLSNAILASGKDLGVDELQRMVRQLANLQRLTTSFR-------FET 413 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ P ++ ++++ L S A N +++L RA + + Sbjct: 414 GSARPDAQSRSNIEQLARALETGLYDGRKLVFAGFSDGDGAAAANRKIALKRATAVRDAV 473 Query: 300 MKSGVSEDR---ISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + + E + ++ F + NRR+++ V Sbjct: 474 LAAAEPESAARVVIEVEAFGEALPMACDNSAWGRQVNRRVEVWV 517 >gi|329894132|ref|ZP_08270117.1| OmpA/MotB domain protein [gamma proteobacterium IMCC3088] gi|328923304|gb|EGG30624.1| OmpA/MotB domain protein [gamma proteobacterium IMCC3088] Length = 228 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 66/225 (29%), Gaps = 7/225 (3%) Query: 120 QKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLS 179 KKQ S + K + + G L + + L Sbjct: 1 MKKQIVMGLIVASMASAGADAAEKKLNSPENIGFGSGLVAGAAIGGPVGGMIGALGGILL 60 Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 I K LQ S L+ A I + S ++ F Sbjct: 61 GNSITTEKTIAELQASLADNESALAAERASRIALEKRNAQLAASMERSRLELAMNVQFRT 120 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 SS P L+ + E+L + +++ G+ D N +LS R + QV Sbjct: 121 GSSELEPLYQQSLENMVELLKKDSSLQVTLSGYADRR---GDEAFNEQLSAQRVAAVQQV 177 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 G+ +RI F + ++ +RR+ I V Sbjct: 178 FRNGGIHLNRIKTRE-FGERSPVDPTVSMDGHAFDRRVAIEVSGS 221 >gi|157375630|ref|YP_001474230.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3] gi|157318004|gb|ABV37102.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3] Length = 245 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 50/175 (28%), Gaps = 20/175 (11%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 + L + + L ++ + S L G+ + Sbjct: 77 QQAQLAMQESKMNQLSDENRSLMAISNRYDSAQHELAQLKAEDQQKLAELSLGLNVQ--- 133 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 F SS +P + L ++ ++ S E + + G+ D + N LS Sbjct: 134 ------FKTGSSELVPHFKLQLDEVAYAMSLSPELRLDLTGYADRR---GDSTYNQALSE 184 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN----RRIDILVED 340 R L+ G+ E R+ + N RR+ + + Sbjct: 185 QRVAEVKTYLVNQGIDESRLD-FRAYGASAPMTEEQSFE--NDFFDRRVTVKLLS 236 >gi|114775594|ref|ZP_01451162.1| hypothetical protein SPV1_04678 [Mariprofundus ferrooxydans PV-1] gi|114553705|gb|EAU56086.1| hypothetical protein SPV1_04678 [Mariprofundus ferrooxydans PV-1] Length = 198 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 14/108 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD +S+ P L + + + I +RG+TDA N L+ RA + Sbjct: 97 FDFNSATIKPNEKTKLAGLFKDI-GRNTTIILRGYTDA---AGGMAYNQHLAWRRAQAVR 152 Query: 297 QVLMKSGVSEDRISKISGFAH----HRLKIASDPMNSANRRIDILVED 340 + L + + +I F + + NRR++I + Sbjct: 153 RWLSEH-LERQPGYEIRAFGKCCYARQP-----GLRPENRRVEIYIRK 194 >gi|17988380|ref|NP_541013.1| outer membrane protein OprF [Brucella melitensis bv. 1 str. 16M] gi|225685925|ref|YP_002733897.1| TraQ protein [Brucella melitensis ATCC 23457] gi|256042982|ref|ZP_05445928.1| TraQ protein [Brucella melitensis bv. 1 str. Rev.1] gi|256112034|ref|ZP_05452979.1| TraQ protein [Brucella melitensis bv. 3 str. Ether] gi|256261862|ref|ZP_05464394.1| outer membrane protein OprF [Brucella melitensis bv. 2 str. 63/9] gi|260564216|ref|ZP_05834701.1| outer membrane protein OprF [Brucella melitensis bv. 1 str. 16M] gi|265989419|ref|ZP_06101976.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|265993480|ref|ZP_06106037.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|81850946|sp|Q8YDY8|YU36_BRUME RecName: Full=Type IV secretion system putative outer membrane lipoprotein BMEII0036; Flags: Precursor gi|17984159|gb|AAL53277.1| outer membrane protein oprf [Brucella melitensis bv. 1 str. 16M] gi|225642030|gb|ACO01943.1| TraQ protein [Brucella melitensis ATCC 23457] gi|260151859|gb|EEW86952.1| outer membrane protein OprF [Brucella melitensis bv. 1 str. 16M] gi|262764350|gb|EEZ10382.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263000088|gb|EEZ12778.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|263091339|gb|EEZ15875.1| outer membrane protein OprF [Brucella melitensis bv. 2 str. 63/9] Length = 172 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 11/119 (9%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 Q F + ++ P + + ++ +L + I++RG TD S + Sbjct: 61 RPPKQTVNVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNSCPPPGDT---Q 116 Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ RA + Y L+ GV RI+ + +A + P NRR+DI + + Sbjct: 117 VARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 172 >gi|325954512|ref|YP_004238172.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] gi|323437130|gb|ADX67594.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922] Length = 436 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 57/170 (33%), Gaps = 7/170 (4%) Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV-KGVLFETTRTGILISIIDQR 232 L P S + R + + I + + +N + I Sbjct: 271 DLEPNSAPGAVVDTRGRTIDHNGNGIPDDIEEYIKNNQGSNTTTVLADSDLLEQLINSGI 330 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 FD + P ++ ++ + E L + + + G+ D N LS R Sbjct: 331 INVYFDYNVDQPYEASVGGIKFVSEYLKRNPNVQMDVIGYADPV---GSDGFNKNLSQRR 387 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK-IASDPMNSANRRIDILVED 340 A + ++L++ G + + ++ + + ++ + RR+ ++ Sbjct: 388 AENVKRILVQQGANANNLN-VVAMGEDKSFQNSTVSAHQLARRVIFKIKK 436 >gi|150024135|ref|YP_001294961.1| OmpA family outer membrane protein [Flavobacterium psychrophilum JIP02/86] gi|149770676|emb|CAL42140.1| Probable outer membrane protein, OmpA family [Flavobacterium psychrophilum JIP02/86] Length = 272 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 8/111 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 ++ FD + + + + E + I G+ D N++LS +R Sbjct: 25 HSIYFDFDKFKLEEKQANETVNFIKNIDSTRIESVQIYGYCDDR---GKESYNFKLSNNR 81 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAH---HRLKIASDPM-NSANRRIDILV 338 A + L++SG+ I I G I + P S NRR+D++V Sbjct: 82 ASIIQKKLVESGIKNKIIVTIEGKGRVMIDDDIIENLPEVRSKNRRVDVVV 132 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 10/114 (8%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNW-----R 286 +F K SS L+KI ++L I+GH +P + Sbjct: 162 GDVLFQKGSSKLNVNAKNDLEKIAKMLLKYKNLQFEIQGHVCCTPPYQKEAIDRDTRKRE 221 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 LS++RA Y + +S++R+ G+ + + RR+++++ Sbjct: 222 LSINRAKVVYNFFVAKKISKNRMI-YKGYGTGKPLGKEPQYD---RRVELVITK 271 >gi|108813332|ref|YP_649099.1| PAL/OmpA-family membrane protein [Yersinia pestis Nepal516] gi|108776980|gb|ABG19499.1| PAL/OmpA-family membrane protein [Yersinia pestis Nepal516] Length = 553 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 31/92 (33%), Gaps = 6/92 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLD 290 + +FD + +L + I + GHTD A+ N LSL Sbjct: 443 DSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTD---ITGDAQANHILSLK 499 Query: 291 RAYSAYQV-LMKSGVSEDRISKISGFAHHRLK 321 RA + L S VS + G+ R Sbjct: 500 RAEALRDWMLSTSDVSPT-CFAVQGYGATRPI 530 >gi|225628536|ref|ZP_03786570.1| lipoprotein [Brucella ceti str. Cudo] gi|237816578|ref|ZP_04595570.1| lipoprotein [Brucella abortus str. 2308 A] gi|225616382|gb|EEH13430.1| lipoprotein [Brucella ceti str. Cudo] gi|237787391|gb|EEP61607.1| lipoprotein [Brucella abortus str. 2308 A] Length = 104 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 11/109 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + ++ P + + ++ +L + I++RG TD + +++ RA + Y Sbjct: 3 FPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPPPGDT---QVARVRALAIY 58 Query: 297 QVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 L+ GV RI+ + +A + P NRR+DI + + Sbjct: 59 NWLINQGVPASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 104 >gi|167568634|ref|ZP_02361508.1| cytochrome c oxidase, subunit II [Burkholderia oklahomensis C6786] Length = 505 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 19/152 (12%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + +A + L VA +G F+ S + Sbjct: 363 QPKQVADARNGKLPEDVAQQAGDTAAPAAEASGAAAQAQALPAEIYFETGKSELPADAKD 422 Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 + E + + +++ G TD + N L+ RA + L +G++E+RI Sbjct: 423 AIAAAAEYVKAHPDAKLALSGFTDKTGSAGA---NAELAKRRAQAVRDALKAAGIAEERI 479 Query: 310 S-----KISGFAHHRLKIASDPMNSANRRIDI 336 I+G A + + RR++I Sbjct: 480 ILKKPETITGGADAK--------EA--RRVEI 501 >gi|254294179|ref|YP_003060202.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814] gi|254042710|gb|ACT59505.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814] Length = 386 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 37/118 (31%), Gaps = 9/118 (7%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR---GHTDASPFRNIARDNW 285 Q F+ SS+ V+ + ISI G+TD N Sbjct: 273 QSQDFAVYFEWDSSVLTVPAQEVVNSATRRALENGCTISIATIDGYTDT---SGNKAYNA 329 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDR 341 RLS RA L+ GV + L A+ NRR I++ R Sbjct: 330 RLSARRAAVVRDALIARGVDAS-VVTTDAKGEEGLAKATADGVREPLNRRAQIILSVR 386 >gi|312884426|ref|ZP_07744130.1| putative outer membrane protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309367738|gb|EFP95286.1| putative outer membrane protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 198 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 11/99 (11%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292 +F+ SS P + ++ + + L + ++G + N LS RA Sbjct: 80 HILFENDSSEVSPIYLSQIRSMADFLDKYPDTSVELQGFANHL---GSHSHNLELSKQRA 136 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN 331 + +VL++ GV +RI I GF + +S N Sbjct: 137 SNVKKVLVRYGVDFERI-SIVGFGDAK------TSHSQN 168 >gi|297180399|gb|ADI16615.1| hypothetical protein [uncultured delta proteobacterium HF0010_01J10] Length = 597 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 30/273 (10%), Positives = 70/273 (25%), Gaps = 27/273 (9%) Query: 72 FGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNI 131 + D + +D ++ Sbjct: 280 PMEPEDADDFEDEDGCPDADNDGDGILDADDICPNEAGEARTDGCPDADGDNIADKDDRC 339 Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 ++ ++ E C + D C + E + + + Sbjct: 340 PDVAGTEAFEGCADGDEDGLADPDDECPTEAGEAPAFGCPDADGDNVPDYRDECADDAA- 398 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + + ++ + I F + T Sbjct: 399 --------AEGVDATRSNGCAADAWVGMNGVQLARGI-------SFSTGRTTLTSTTRRG 443 Query: 252 LQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 L K+ +L + + HT+ DN L+ RA + L++ GV+ +R+ Sbjct: 444 LDKVAALLTEFAGLTKVEVAAHTNERR---SEADNVSLTKARAEAIMGYLVEKGVAAERL 500 Query: 310 SKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 S I G + D + RR++ + +++ Sbjct: 501 SMI-GHGSEK---TEDGQAA--RRVEFNILEKE 527 >gi|302345879|ref|YP_003814232.1| OmpA family protein [Prevotella melaninogenica ATCC 25845] gi|302149522|gb|ADK95784.1| OmpA family protein [Prevotella melaninogenica ATCC 25845] Length = 387 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 63/166 (37%), Gaps = 20/166 (12%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 ++ + RLQD ++ + + L V+ V ++ + F+ Sbjct: 238 TQHQAALDALNARLQDAEEENTRLRNELANQKPVETVSESVK------QLVTTPVSVFFE 291 Query: 239 KS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 + S+I + +V +Q + + + + + G+ D+ A N +LS RA Sbjct: 292 INQSTIASQKDLVNVQALAKYAKDNNNNLLVTGYADS--ATGSADYNQKLSERRATVVAN 349 Query: 298 VLMKSGVSEDRISKISGFA--HH-RLKIASDPMNSANRRIDILVED 340 L+K G+ ++I+ + G S NRR + + + Sbjct: 350 ELVKMGIENNKITTV-GKGGVETLSPI-------SFNRRATVQITE 387 >gi|254411859|ref|ZP_05025635.1| Putative phospholipid-binding domain family [Microcoleus chthonoplastes PCC 7420] gi|196181581|gb|EDX76569.1| Putative phospholipid-binding domain family [Microcoleus chthonoplastes PCC 7420] Length = 905 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 25/200 (12%), Positives = 64/200 (32%), Gaps = 6/200 (3%) Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 G T + + Q+ + D K ++ + + Sbjct: 684 GDTITLSGKLPNQYLVEKAGQIAQTTIPNGEIDNDIIAIKVPPDPVEVAAEVERVTAILN 743 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 + + + I + + + + + ++ + + + + Sbjct: 744 QTERLAIWTNFQDGQVTVE-GSVIQVKDAQKITEALEEIPGVDSVTNTVQLQPLALASRI 802 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD +S+ + + LA + GH+D +N L+L+RA + Sbjct: 803 YFDLNSADLKASEQAKMDALTAFLADYPNQSLRVIGHSD---PSGTPLENQELALERAKA 859 Query: 295 AYQVLMKSGVSEDRISKISG 314 +VL++ G+ R+ ++SG Sbjct: 860 VAEVLVRQGIDARRL-EVSG 878 >gi|330904017|gb|EGH34589.1| flagellar motor protein MotB [Pseudomonas syringae pv. japonica str. M301072PT] Length = 88 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 36/80 (45%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 +LFE T+ G+ I I+D N PMFD S+ P +L + + + Sbjct: 1 KVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIK 60 Query: 261 HSTEVISIRGHTDASPFRNI 280 +SI GHTDA+PF Sbjct: 61 SVPNKVSISGHTDATPFVGS 80 >gi|99082759|ref|YP_614913.1| OmpA/MotB [Ruegeria sp. TM1040] gi|99039039|gb|ABF65651.1| OmpA/MotB [Ruegeria sp. TM1040] Length = 517 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 50/154 (32%), Gaps = 12/154 (7%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + L+ I S + + + + + S F+ SS P ++ Sbjct: 371 QGERLSNAIRSAGEDIPLSELQRLISGLDGLQRLTTSFR-------FEAGSSRPDAQSRN 423 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE--DR 308 + + L S A N +++ RA S + + ++ + DR Sbjct: 424 NIDLLARELEAGVYDGKRLVFVGFSDGEGPAEGNRAIAMKRAESVRRAVERAAETANLDR 483 Query: 309 I-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 I + + + D NRR+++ + Sbjct: 484 ISIETAAYGEALPIACDDSAWGRQANRRVEVWIR 517 >gi|254695204|ref|ZP_05157032.1| outer membrane protein OprF [Brucella abortus bv. 3 str. Tulya] gi|261215567|ref|ZP_05929848.1| TraQ protein [Brucella abortus bv. 3 str. Tulya] gi|260917174|gb|EEX84035.1| TraQ protein [Brucella abortus bv. 3 str. Tulya] Length = 172 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 11/119 (9%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 Q F + ++ P + + ++ +L + I++RG TD + + Sbjct: 61 RPPKQTVNVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPPPGDT---Q 116 Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ RA + Y L+ GV RI+ + +A + P NRR+DI + + Sbjct: 117 VARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 172 >gi|254487991|ref|ZP_05101196.1| OmpA domain protein [Roseobacter sp. GAI101] gi|214044860|gb|EEB85498.1| OmpA domain protein [Roseobacter sp. GAI101] Length = 520 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 53/165 (32%), Gaps = 12/165 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + + I+ + + + + + + S F+ Sbjct: 363 DQTPEEIPIEDQGNRFTNAITVAGADVTLEELQRMTATLKPMARLSTSFR-------FEA 415 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S ++ +Q++ L S R N ++L RA + + + Sbjct: 416 GSIRLDAQSRSNVQQLARALEIGQYDARRLLFVGFSDGDGAGRANREIALRRAEAVRRAV 475 Query: 300 MKSGVSE--DRIS-KISGFAHHRLKIASDPMNSA--NRRIDILVE 339 +K+ V+ DR++ + F D NRR+++ V Sbjct: 476 IKAAVTANLDRVTLDVDAFGEAMPMACDDSAWGRQANRRVEVWVR 520 >gi|39933290|ref|NP_945566.1| OmpA family protein [Rhodopseudomonas palustris CGA009] gi|39652915|emb|CAE25657.1| possible OmpA family member [Rhodopseudomonas palustris CGA009] Length = 689 Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 10/112 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-----STEVISIRGHTDASPFRNIARDNW 285 NT FD S P+ LQ I + L EV I GHTDA DN Sbjct: 557 DLNTINFDLGSWDIPPDQAAKLQAIADGLNRAIQRNPREVFLIEGHTDAV---GNDTDNL 613 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 LS RA +A +L + GV + ++ G+ LKI + NRR+ I Sbjct: 614 SLSDRRAEAAAALLTQQFGVPAENLTS-QGYGEQYLKIQTQAPERQNRRVTI 664 >gi|93005426|ref|YP_579863.1| OmpA/MotB [Psychrobacter cryohalolentis K5] gi|92393104|gb|ABE74379.1| OmpA/MotB [Psychrobacter cryohalolentis K5] Length = 218 Score = 60.4 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 5/107 (4%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F K SS E + L + L + I GH + L+ + Sbjct: 84 EYRAFFAKGSSELSKEYQLELDTVALKLQEYYTATMRIEGHASVDEMSDTKLRPNSLARN 143 Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRI 334 RA L+ K + +R++ + + + +SD NRR+ Sbjct: 144 RALIVKNYLVLKHKIDPERLNTFN-YDAEQPITSSDTEEGKSMNRRV 189 >gi|213022384|ref|ZP_03336831.1| hypothetical protein Salmonelentericaenterica_06936 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 62 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 3/50 (6%) Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 +L GV R+ I G + + NRR++ILV + Sbjct: 14 AEVAALLTSGGVPAGRVH-IVGKGDTVPVADNGSKAGRAKNRRVEILVVE 62 >gi|251767113|ref|ZP_02266018.2| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei PRL-20] gi|254189998|ref|ZP_04896507.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] gi|254200781|ref|ZP_04907146.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei FMH] gi|254204753|ref|ZP_04911106.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei JHU] gi|147748393|gb|EDK55468.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei FMH] gi|147754339|gb|EDK61403.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei JHU] gi|157937675|gb|EDO93345.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237] gi|243063848|gb|EES46034.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei PRL-20] Length = 274 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 21/117 (17%) Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289 +F S P L +I L + I + G+TD N +LSL Sbjct: 156 LFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTDAYNRQLSL 212 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----------NRRIDI 336 RA + L G+ D I G ++ +RR+ I Sbjct: 213 ARAETIRAYLTTRGLPGDLIVA-QGLGKADPV-SNGCPAGRSAEAIACLAPDRRVRI 267 >gi|298208247|ref|YP_003716426.1| OmpA/MotB [Croceibacter atlanticus HTCC2559] gi|83848168|gb|EAP86038.1| OmpA/MotB [Croceibacter atlanticus HTCC2559] Length = 424 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 7/142 (4%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRN-TPMFDKSSSIPLPETIVVLQKIGEV 258 S L A + G ++ +ID+ F +S P ++ + + + Sbjct: 286 DEMESALDARYLKTGSETTVNGDDVIAELIDKGYVNVYFKFNSEEPSVYSLEAINYLVKY 345 Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 + +T+ ++ G+ D N +LS RA +L+ SGVS R+ + G Sbjct: 346 MNANTDANATLVGYADEI---GNEAYNQKLSEQRAQKINDILVASGVSASRL-TVKGGGE 401 Query: 318 HRLKIASDP-MNSANRRIDILV 338 S RR+ + Sbjct: 402 DNSVDKSSKYARQLMRRVTFKL 423 >gi|254457405|ref|ZP_05070833.1| OmpA family protein [Campylobacterales bacterium GD 1] gi|207086197|gb|EDZ63481.1| OmpA family protein [Campylobacterales bacterium GD 1] Length = 252 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 55/118 (46%), Gaps = 7/118 (5%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 ++ I +++ + + E+ + LQ + + ++ + + I GHTD + Sbjct: 138 VISEIPEKQLSYTLYFNGIKLTDESKISLQTMIDEVSQRDKPYMQIIGHTDT---AGPSE 194 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDILV 338 N L L RA + Y+++ S +S +I + ++ L I ++ + NRR++I V Sbjct: 195 KNKILGLKRAKAVYEMIKNSDISYSKID-VDSYSESNLAIKTEDETVEQLNRRVEIFV 251 >gi|288940580|ref|YP_003442820.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM 180] gi|288895952|gb|ADC61788.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180] Length = 193 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + E IS+ GHTDA + N++L L RA + ++ G+S I + Sbjct: 116 SEVQERISLTGHTDA---KGSDAYNYQLGLRRAQAVQDYMISRGISPQDIVSVESRGKSD 172 Query: 320 LKIASDPMNSANRRIDI 336 + D + RR+ I Sbjct: 173 MLPGVDIYSVEQRRVRI 189 >gi|313157808|gb|EFR57219.1| OmpA family protein [Alistipes sp. HGB5] Length = 376 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 10/109 (9%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 R F SS + + E L + E + I G+ DA N ++S Sbjct: 274 RENIFFRIGSSQIRTTEEAKVGALVEYLKANPEANVEIVGYADA--ATGSHAVNLKISKL 331 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILV 338 RA S L K+G++ RIS G + P N R+ I + Sbjct: 332 RAESVAAALKKAGIAASRISA-EGRGDTAQPF----PGVEKN-RVSICI 374 >gi|120611464|ref|YP_971142.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1] gi|120589928|gb|ABM33368.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1] Length = 177 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 10/115 (8%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 + + F + + + + + + I G DA+ A N Sbjct: 69 RVVVDGSVVKFYFASGRADLTADAAPAIADVVRAVKDGNRRVVISGFHDAT---GDAAAN 125 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL-KIASDPMNSANRRIDILV 338 L+ RA + L+ +G EDRI + D + RR+++ + Sbjct: 126 AGLAKQRAQAVRDALVAAGAPEDRIEL------RKPELAQGDGNAAEARRVEVTL 174 >gi|53721933|ref|YP_110918.1| OmpA family protein [Burkholderia pseudomallei K96243] gi|121596633|ref|YP_989916.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia mallei SAVP1] gi|124383233|ref|YP_001024397.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia mallei NCTC 10229] gi|126443869|ref|YP_001062318.1| ompA family protein [Burkholderia pseudomallei 668] gi|126447564|ref|YP_001078178.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia mallei NCTC 10247] gi|126456472|ref|YP_001075283.1| ompA family protein [Burkholderia pseudomallei 1106a] gi|134279076|ref|ZP_01765789.1| ompA family protein [Burkholderia pseudomallei 305] gi|167723261|ref|ZP_02406497.1| ompA family protein [Burkholderia pseudomallei DM98] gi|167742230|ref|ZP_02415004.1| ompA family protein [Burkholderia pseudomallei 14] gi|167819406|ref|ZP_02451086.1| ompA family protein [Burkholderia pseudomallei 91] gi|167827777|ref|ZP_02459248.1| ompA family protein [Burkholderia pseudomallei 9] gi|167849251|ref|ZP_02474759.1| ompA family protein [Burkholderia pseudomallei B7210] gi|167897853|ref|ZP_02485255.1| ompA family protein [Burkholderia pseudomallei 7894] gi|167906193|ref|ZP_02493398.1| ompA family protein [Burkholderia pseudomallei NCTC 13177] gi|167914516|ref|ZP_02501607.1| ompA family protein [Burkholderia pseudomallei 112] gi|167922410|ref|ZP_02509501.1| ompA family protein [Burkholderia pseudomallei BCC215] gi|217418937|ref|ZP_03450444.1| ompA family protein [Burkholderia pseudomallei 576] gi|226197635|ref|ZP_03793210.1| ompA family protein [Burkholderia pseudomallei Pakistan 9] gi|237509538|ref|ZP_04522253.1| OmpA family protein [Burkholderia pseudomallei MSHR346] gi|242311390|ref|ZP_04810407.1| ompA family protein [Burkholderia pseudomallei 1106b] gi|254174141|ref|ZP_04880803.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei ATCC 10399] gi|254183366|ref|ZP_04889958.1| ompA family protein [Burkholderia pseudomallei 1655] gi|254193146|ref|ZP_04899581.1| ompA family protein [Burkholderia pseudomallei S13] gi|254263683|ref|ZP_04954548.1| ompA family protein [Burkholderia pseudomallei 1710a] gi|254300263|ref|ZP_04967709.1| ompA family protein [Burkholderia pseudomallei 406e] gi|254357001|ref|ZP_04973276.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei 2002721280] gi|52212347|emb|CAH38371.1| OmpA family protein [Burkholderia pseudomallei K96243] gi|121224431|gb|ABM47962.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei SAVP1] gi|124291253|gb|ABN00523.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei NCTC 10229] gi|126223360|gb|ABN86865.1| ompA family protein [Burkholderia pseudomallei 668] gi|126230240|gb|ABN93653.1| ompA family protein [Burkholderia pseudomallei 1106a] gi|126240418|gb|ABO03530.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei NCTC 10247] gi|134249495|gb|EBA49576.1| ompA family protein [Burkholderia pseudomallei 305] gi|148026028|gb|EDK84151.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei 2002721280] gi|157810253|gb|EDO87423.1| ompA family protein [Burkholderia pseudomallei 406e] gi|160695187|gb|EDP85157.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia mallei ATCC 10399] gi|169649900|gb|EDS82593.1| ompA family protein [Burkholderia pseudomallei S13] gi|184213899|gb|EDU10942.1| ompA family protein [Burkholderia pseudomallei 1655] gi|217398241|gb|EEC38256.1| ompA family protein [Burkholderia pseudomallei 576] gi|225930244|gb|EEH26256.1| ompA family protein [Burkholderia pseudomallei Pakistan 9] gi|235001743|gb|EEP51167.1| OmpA family protein [Burkholderia pseudomallei MSHR346] gi|242134629|gb|EES21032.1| ompA family protein [Burkholderia pseudomallei 1106b] gi|254214685|gb|EET04070.1| ompA family protein [Burkholderia pseudomallei 1710a] Length = 276 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 21/117 (17%) Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289 +F S P L +I L + I + G+TD N +LSL Sbjct: 158 LFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTDAYNRQLSL 214 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----------NRRIDI 336 RA + L G+ D I G ++ +RR+ I Sbjct: 215 ARAETIRAYLTTRGLPGDLIVA-QGLGKADPV-SNGCPAGRSAEAIACLAPDRRVRI 269 >gi|15891235|ref|NP_356907.1| omp16 protein [Agrobacterium tumefaciens str. C58] gi|22653886|sp|Q8U9L5|OMP16_AGRT5 RecName: Full=Outer membrane lipoprotein omp16 homolog; Flags: Precursor gi|15159600|gb|AAK89692.1| omp16 protein [Agrobacterium tumefaciens str. C58] Length = 177 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD S+ + LQ+ + L+ I++ GH D N L R Sbjct: 68 DRIFFDTDSTSIRADAQQTLQRQAQWLSRYPNYAITVEGHADER---GTREYNLALGARR 124 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + L GV R+ IS + + S NRR Sbjct: 125 AAATRDFLASQGVPASRMKTIS-YGKEKPVAVCDDISCWSQNRR 167 >gi|254409577|ref|ZP_05023358.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420] gi|196183574|gb|EDX78557.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420] Length = 510 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 32/299 (10%), Positives = 76/299 (25%), Gaps = 20/299 (6%) Query: 57 TDDDTKKA---IEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDL 113 K+ + + + ++ PE+ S+ + Sbjct: 215 VTQAKKQGHTVVLSSQDAPQAIVDVIVASNRLIESQPEKISELLEAYYRRIDVNVREPSQ 274 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + + E + + D+ K + + + + + Sbjct: 275 LKTQIAEDGELSSSEASAVLQGIDFFTASEAQQWMSDNILEKRIGSTAAVLVLAGRLNDV 334 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV---------KGVLFETTRTGI 224 P S + + + + + +AD + V + Sbjct: 335 PQAPQSLFSPQFLTKAATNTETLISLVRADNPELADRLSGKGETVAAVPQVSAQQITAAP 394 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIA 281 I ++ R F S+ + L ++ + + GHT + A Sbjct: 395 DIGNLEVRGEVKFGVGSATLTSQGQQTLNQLTNEIQEFNPQTLAVRVIGHTSKT---GAA 451 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 N LS RA L G+ + G ++ P + +R +I + Sbjct: 452 TLNQTLSQQRAQVVVNYLKNRGLKHN--FVAEGKGFNQPLSGIPPTDPRQQRTEIRLVR 508 >gi|84500927|ref|ZP_00999162.1| peptidoglycan-associated protein [Oceanicola batsensis HTCC2597] gi|84390994|gb|EAQ03412.1| peptidoglycan-associated protein [Oceanicola batsensis HTCC2597] Length = 153 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRL 287 D+ F S + L + + + V+ + G+ D A N L Sbjct: 44 QDEGLQVYFPSGVSSLSQQAAAKLDRAARLYRDGNPIVMIVSGNADTV---GSAAANLDL 100 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDIL 337 SL RA + L+ G+ DR+ ++ G + L + + NS NR + I Sbjct: 101 SLRRARTVASGLVSRGIPIDRL-QVVGRGNSELPVPTENGVANSENRSVSIT 151 >gi|62317017|ref|YP_222870.1| lipoprotein [Brucella abortus bv. 1 str. 9-941] gi|83269011|ref|YP_418302.1| outer membrane protein OprF [Brucella melitensis biovar Abortus 2308] gi|189022284|ref|YP_001932025.1| outer membrane protein OprF [Brucella abortus S19] gi|254691499|ref|ZP_05154753.1| outer membrane protein OprF [Brucella abortus bv. 6 str. 870] gi|254698304|ref|ZP_05160132.1| outer membrane protein OprF [Brucella abortus bv. 2 str. 86/8/59] gi|254731746|ref|ZP_05190324.1| outer membrane protein OprF [Brucella abortus bv. 4 str. 292] gi|256256684|ref|ZP_05462220.1| outer membrane protein OprF [Brucella abortus bv. 9 str. C68] gi|260544253|ref|ZP_05820074.1| outer membrane protein OprF [Brucella abortus NCTC 8038] gi|260757119|ref|ZP_05869467.1| TraQ protein [Brucella abortus bv. 6 str. 870] gi|260759511|ref|ZP_05871859.1| TraQ protein [Brucella abortus bv. 4 str. 292] gi|260762755|ref|ZP_05875087.1| TraQ protein [Brucella abortus bv. 2 str. 86/8/59] gi|260882929|ref|ZP_05894543.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|297250039|ref|ZP_06933740.1| type IV secretion system outer membrane lipoprotein [Brucella abortus bv. 5 str. B3196] gi|123545549|sp|Q2YJ83|YP57_BRUA2 RecName: Full=Type IV secretion system putative outer membrane lipoprotein BAB2_0057; Flags: Precursor gi|148841383|sp|P0C536|YN58_BRUAB RecName: Full=Type IV secretion system putative outer membrane lipoprotein BruAb2_0058; Flags: Precursor gi|8163895|gb|AAF73905.1|AF226278_12 unknown [Brucella abortus] gi|62197210|gb|AAX75509.1| lipoprotein, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82939285|emb|CAJ12223.1| outer membrane protein OprF [Brucella melitensis biovar Abortus 2308] gi|189020858|gb|ACD73579.1| outer membrane protein OprF [Brucella abortus S19] gi|260097524|gb|EEW81398.1| outer membrane protein OprF [Brucella abortus NCTC 8038] gi|260669829|gb|EEX56769.1| TraQ protein [Brucella abortus bv. 4 str. 292] gi|260673176|gb|EEX59997.1| TraQ protein [Brucella abortus bv. 2 str. 86/8/59] gi|260677227|gb|EEX64048.1| TraQ protein [Brucella abortus bv. 6 str. 870] gi|260872457|gb|EEX79526.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|297173908|gb|EFH33272.1| type IV secretion system outer membrane lipoprotein [Brucella abortus bv. 5 str. B3196] Length = 172 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 11/119 (9%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 Q F + ++ P + + ++ +L + I++RG TD + + Sbjct: 61 RPPKQTVNVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPPPGDT---Q 116 Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ RA + Y L+ GV RI+ + +A + P NRR+DI + + Sbjct: 117 VARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 172 >gi|293395760|ref|ZP_06640042.1| outer membrane protein A [Serratia odorifera DSM 4582] gi|291421697|gb|EFE94944.1| outer membrane protein A [Serratia odorifera DSM 4582] Length = 352 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 18/121 (14%) Query: 232 RNTPMFDKSSSIPLPETI---VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS 288 ++ MF +S+ P+ L E+ + + + G++D A N +LS Sbjct: 228 KSDVMFGYNSAELSPQGQAAVRDLYNRPEIQSAKNQTTMVIGYSDRI---GSADYNQQLS 284 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD----PMNSA-------NRRIDIL 337 RA + L+ G+ + G + S +RR+ + Sbjct: 285 SRRAQAVADELIGLGMPAANVQA-QGRGASESVTGTQCDGISARSQRIDCLAPDRRVVVE 343 Query: 338 V 338 + Sbjct: 344 I 344 >gi|153010830|ref|YP_001372044.1| OmpA/MotB domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151562718|gb|ABS16215.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188] Length = 742 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 10/106 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 F S+ L+K+ + E I GHTDA R N LS R Sbjct: 628 FATGSAEVSLSQAKTLRKVATAMQKVLAKDPGETFFIEGHTDAV---GSDRSNLVLSDKR 684 Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 A S +L + + + + G+ LKI + NRR+ I Sbjct: 685 AESVASLLTEVYEIPPENLVT-QGYGERFLKIRTQAAEQENRRVTI 729 >gi|126731139|ref|ZP_01746947.1| hypothetical protein SSE37_21910 [Sagittula stellata E-37] gi|126708441|gb|EBA07499.1| hypothetical protein SSE37_21910 [Sagittula stellata E-37] Length = 242 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 54/201 (26%), Gaps = 8/201 (3%) Query: 140 SEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKI 199 + + L + + P + + + + L Sbjct: 28 GDDSALPDDTAARPTSALARCLASPDAATCAGATVDPSGAMNESAVPQVQFETLVLDLDQ 87 Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 S +++ T FD S+ + L + L Sbjct: 88 KKVTSTAAPPAAAPNYAAPQPAAHGTVALPSVAVTIEFDFDSANIRGDQFGKLTALVAAL 147 Query: 260 AHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + ++ GHTDA N LS RA S L + V+ GF Sbjct: 148 SDPALAGTSYAVIGHTDA---SGSEGYNCDLSRRRAASVAGALNAAYVTLP--LYPVGFG 202 Query: 317 HHRLKIASDPMNSANRRIDIL 337 H LK DP NRR+ + Sbjct: 203 EHVLKNVYDPRAPENRRVTFM 223 >gi|312959245|ref|ZP_07773763.1| OmpA/MotB [Pseudomonas fluorescens WH6] gi|311286505|gb|EFQ65068.1| OmpA/MotB [Pseudomonas fluorescens WH6] Length = 302 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 26/90 (28%), Gaps = 6/90 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F L I E + I + GH+D N +S RA + Sbjct: 178 FPGGGIELDAAAKQKLAVIIEFMKADPTVNHIELNGHSDN---SGNRLSNRDVSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 +G+ E +I + + + Sbjct: 235 VMDYFKANGIQESQI-TLRFHGESYPLVPN 263 >gi|306845321|ref|ZP_07477896.1| lipoprotein [Brucella sp. BO1] gi|306274237|gb|EFM56049.1| lipoprotein [Brucella sp. BO1] Length = 129 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 11/119 (9%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 Q + F + ++ P + + ++ +L + I++RG TD + + Sbjct: 18 RPPKQTVSVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPTPGDT---Q 73 Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ RA + Y L+ GV RI+ + +A + P NRR+DI + + Sbjct: 74 VARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 129 >gi|296156854|ref|ZP_06839691.1| efflux transporter, RND family, MFP subunit [Burkholderia sp. Ch1-1] gi|295892740|gb|EFG72521.1| efflux transporter, RND family, MFP subunit [Burkholderia sp. Ch1-1] Length = 558 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 15/113 (13%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ P++ L + L A I G+TD+ N +L+ RA Sbjct: 456 VFFAVGSASLDPQSAEALAGVARRLLAAPGSRAVISGYTDS---SGTYEANVKLAAARAA 512 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMNSANRRIDILVEDRQG 343 + L+ +GV RI R + P S RR+D+ + G Sbjct: 513 TVRSALVVAGVDVARIDM------RRPARIVASDAPDRS--RRVDVTLAPSTG 557 >gi|298386442|ref|ZP_06995998.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14] gi|298260819|gb|EFI03687.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14] Length = 363 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 10/137 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 +V + + E + + I + F +S+ + + + E L + Sbjct: 233 EPVVTEQPKPTPVAEKPQPKKEVVIEPMKQNIFFAINSAKIQDDQQAKIASLVEYLEKNA 292 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLK 321 +S+ G+ D AR N +LS RA + + L G++ DRI ++ + Sbjct: 293 TAKVSVTGYAD--KGTGNARINSKLSEKRANNVVEALKAKGIAADRI-TVAYKGDTVQPY 349 Query: 322 IASDPMNSANRRIDILV 338 + P R+ I + Sbjct: 350 --NTPEE---NRVSICI 361 >gi|91201947|emb|CAJ75007.1| similar to H+-driven flagellar motor component MotB [Candidatus Kuenenia stuttgartiensis] Length = 230 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 3/106 (2%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD-ASPFRNIARDNWRLSLDRAYSA 295 F + + E + L + + A ++ + GHT A +W+LS+DRA + Sbjct: 124 FKEHGATLSLEGMHSLNNLVNLTADRPVLLMVEGHTRVAFKPSKDYETSWKLSVDRARAV 183 Query: 296 YQVLMKSG-VSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 L + G +S R+ + G ++ + S + N R+ I+++ Sbjct: 184 ADYLHEKGNISHKRLITV-GHGNNNSFVKSPGGDRFNDRVSIIIKK 228 >gi|300870375|ref|YP_003785246.1| peptidoglycan-associated lipoprotein [Brachyspira pilosicoli 95/1000] gi|300688074|gb|ADK30745.1| outer membrane protein, peptidoglycan-associated lipoprotein [Brachyspira pilosicoli 95/1000] Length = 202 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 9/161 (5%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 M + + +A + + + + R + + +F + + Sbjct: 25 PEMAPAENAEPVALAVQEEPQAVANTGELYLPQGTSIRDSQRGRVFETNPKIIFGFAKTT 84 Query: 244 PLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 V ++ E L + V + GHT N+ LS++R +A L+ + Sbjct: 85 MPANANVAFAQVIEFLDKNPNVRLVVEGHTSNKGI--AYPYNYNLSVNRVKNARAYLVNN 142 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSAN-RRIDILVEDRQ 342 GV +R+ + + AN RR + ++ + Q Sbjct: 143 GVDANRLIE-KPLGEALP----ESNVQANLRRYEFIIIENQ 178 >gi|110678301|ref|YP_681308.1| OmpA family domain-containing protein [Roseobacter denitrificans OCh 114] gi|109454417|gb|ABG30622.1| OmpA family domain protein [Roseobacter denitrificans OCh 114] Length = 319 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S P L+++ + L +++ GHTDA+ N LS RA S Sbjct: 214 FSVGTSDLGPGPFSALKELSDFLTRSQDMRVALVGHTDAT---GTLAANISLSRARARSV 270 Query: 296 YQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L++ GVS D++ G + ++ NRR+++++ + Q Sbjct: 271 RSRLIETYGVSPDQVDA-EGMGYLAPIASNLTEEGRRLNRRVEVVLLNTQ 319 >gi|319902016|ref|YP_004161744.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] gi|319417047|gb|ADV44158.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] Length = 404 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 62/160 (38%), Gaps = 16/160 (10%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + K K ++ + K + + V + D N F+ + Sbjct: 245 KSKKVKPEIRYVEKVVEKIIEKPTI------VEKVVQAPPHANVLCDLFNNIYFEFDKAD 298 Query: 244 PLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 +++ ++ KI +++ T I G TDA + + N LS RA + + L + Sbjct: 299 ITEKSVSIINKIAQIMMTDTNKRYLITGCTDA---KGSLQYNMGLSQRRANAVIKALTQQ 355 Query: 303 GVSEDRISKISGFA---HHRLKIASDPMNSANRR--IDIL 337 GV + + K G + + AS+ + +R+ ++I+ Sbjct: 356 GVPSE-MLKSRGVGKKISYAPQDASNEIREGDRKIIVEII 394 >gi|271962882|ref|YP_003337078.1| Outer membrane protein and related peptidoglycan- associated (lipo)protein-like protein [Streptosporangium roseum DSM 43021] gi|270506057|gb|ACZ84335.1| Outer membrane protein and related peptidoglycan- associated (lipo)protein-like protein [Streptosporangium roseum DSM 43021] Length = 535 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 12/102 (11%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 + +F + + P + VL + +++ S I++ GH D+ N LS R Sbjct: 264 SDVLFALNRADLTPRSRAVLTRTAKLIDTSEGATITVEGHADS---SGTDAINDPLSQRR 320 Query: 292 AYSAYQV----LMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 A + + L ++GV + G+ R ++ Sbjct: 321 AQAVQRALSGLLTRTGV----RFQAKGYGSRRPLYGNEDEEG 358 >gi|218510720|ref|ZP_03508598.1| probable outer membrane lipoprotein [Rhizobium etli Brasil 5] gi|218517107|ref|ZP_03513947.1| probable outer membrane lipoprotein [Rhizobium etli 8C-3] Length = 178 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 37/111 (33%), Gaps = 9/111 (8%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 I++ F + S+ + L L + + ++G D A Sbjct: 62 ILNVGRRIYFKQDSATLDSVAMATLDNQAAWLNRNPTWLLKLQGFADD---SGSASKMQT 118 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334 LS RA +A L GV R+ G+ + R S NRR+ Sbjct: 119 LSQKRADAAMAYLASKGVDPKRMWA-KGYGNDREVRDC-TDRSCKVQNRRV 167 >gi|303252130|ref|ZP_07338298.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247466|ref|ZP_07529511.1| hypothetical protein appser2_4620 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648913|gb|EFL79101.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855969|gb|EFM88127.1| hypothetical protein appser2_4620 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 283 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 20/116 (17%) Query: 243 IPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + V+ + L S E + + G+TD + N LS RA L++ Sbjct: 151 TLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRL---GSEKYNLDLSQRRANMVKARLVQ 207 Query: 302 SGVSEDRISKISGFAHHRLKIASD--PMNSA-------NRRIDI-----LVEDRQG 343 GV+ + I+ + G+ + A D P NRR+++ +++ +G Sbjct: 208 QGVTAN-INAV-GYGKAQQVKACDGIPHGQELKDCLRPNRRVEVTANGGVLKQNEG 261 >gi|305665203|ref|YP_003861490.1| OmpA family protein [Maribacter sp. HTCC2170] gi|88709956|gb|EAR02188.1| OmpA family protein [Maribacter sp. HTCC2170] Length = 640 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 5/93 (5%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + FD+ S + L K+ + + + ++I HT++ + R N +LS Sbjct: 523 KIQKFYFDRGKSNITLKIKTELDKVVDAVQRFPQLKLTIESHTNS---KGSKRSNQQLSQ 579 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 R+ + L +G+S I + G+ +L Sbjct: 580 RRSEAIKTYLTTNGLSSANIKAV-GYGEEKLVN 611 >gi|148558474|ref|YP_001257134.1| putative lipoprotein [Brucella ovis ATCC 25840] gi|163844256|ref|YP_001621911.1| hypothetical protein BSUIS_B0062 [Brucella suis ATCC 23445] gi|254699373|ref|ZP_05161201.1| hypothetical protein Bsuib55_00717 [Brucella suis bv. 5 str. 513] gi|254706382|ref|ZP_05168210.1| hypothetical protein BpinM_05165 [Brucella pinnipedialis M163/99/10] gi|254711327|ref|ZP_05173138.1| hypothetical protein BpinB_13940 [Brucella pinnipedialis B2/94] gi|254711926|ref|ZP_05173737.1| hypothetical protein BcetM6_00730 [Brucella ceti M644/93/1] gi|254714996|ref|ZP_05176807.1| hypothetical protein BcetM_00740 [Brucella ceti M13/05/1] gi|256014854|ref|YP_003104863.1| lipoprotein, putative [Brucella microti CCM 4915] gi|256030043|ref|ZP_05443657.1| hypothetical protein BpinM2_05215 [Brucella pinnipedialis M292/94/1] gi|256059695|ref|ZP_05449890.1| hypothetical protein Bneo5_05015 [Brucella neotomae 5K33] gi|256158216|ref|ZP_05456125.1| hypothetical protein BcetM4_05150 [Brucella ceti M490/95/1] gi|256252843|ref|ZP_05458379.1| hypothetical protein BcetB_00720 [Brucella ceti B1/94] gi|260166906|ref|ZP_05753717.1| lipoprotein, putative [Brucella sp. F5/99] gi|261216699|ref|ZP_05930980.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261219930|ref|ZP_05934211.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261313828|ref|ZP_05953025.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261318931|ref|ZP_05958128.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261319567|ref|ZP_05958764.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261323667|ref|ZP_05962864.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261749823|ref|ZP_05993532.1| TraQ protein [Brucella suis bv. 5 str. 513] gi|261756291|ref|ZP_06000000.1| outer membrane protein OprF [Brucella sp. F5/99] gi|265987066|ref|ZP_06099623.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265996727|ref|ZP_06109284.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|148369759|gb|ABQ62631.1| putative lipoprotein [Brucella ovis ATCC 25840] gi|163674979|gb|ABY39089.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|255997514|gb|ACU49201.1| lipoprotein, putative [Brucella microti CCM 4915] gi|260918514|gb|EEX85167.1| conserved hypothetical protein [Brucella ceti B1/94] gi|260921788|gb|EEX88356.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261292257|gb|EEX95753.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261298154|gb|EEY01651.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261299647|gb|EEY03144.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261302854|gb|EEY06351.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261736275|gb|EEY24271.1| outer membrane protein OprF [Brucella sp. F5/99] gi|261739576|gb|EEY27502.1| TraQ protein [Brucella suis bv. 5 str. 513] gi|262551024|gb|EEZ07185.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264659263|gb|EEZ29524.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] Length = 172 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 11/119 (9%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 Q + F + ++ P + + ++ +L + I++RG TD + + Sbjct: 61 RPPKQTVSVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPPPGDT---Q 116 Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ RA + Y L+ GV RI+ + +A + P NRR+DI + + Sbjct: 117 VARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 172 >gi|218461533|ref|ZP_03501624.1| probable outer membrane lipoprotein [Rhizobium etli Kim 5] Length = 175 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 37/111 (33%), Gaps = 9/111 (8%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 I++ F + S+ + L + L + + ++G D Sbjct: 59 ILNVGRRIYFKQDSAALDSVAMATLDSQADWLNKNPTWLLKLQGFADD---SGSTSKMQT 115 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334 LS RA +A L GV R+ G+ + R S NRR+ Sbjct: 116 LSQKRAEAAMAYLASKGVDPKRMWA-KGYGNDREVRDC-TDRSCKVQNRRV 164 >gi|119470188|ref|ZP_01612954.1| Outer membrane protein [Alteromonadales bacterium TW-7] gi|119446609|gb|EAW27883.1| Outer membrane protein [Alteromonadales bacterium TW-7] Length = 284 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 8/110 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F + P+ V L + +++ + + GHTD+ N+ L+L RA + Sbjct: 155 FAFKAFEITPKYAVRLAQAADLVKELESISILLVGHTDSM---GEMASNYELALKRAETV 211 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIA---SDPMNSANRRIDILVEDRQ 342 L+ GV I+ ++ + +D + ++RR++ +V D Sbjct: 212 KHWLVVYGVPVQSITTLT-QGSLKPYSDEPQTDSVRHSDRRVEAIVLDAN 260 >gi|317481533|ref|ZP_07940589.1| OmpA family protein [Bacteroides sp. 4_1_36] gi|316902303|gb|EFV24201.1| OmpA family protein [Bacteroides sp. 4_1_36] Length = 170 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 46/145 (31%), Gaps = 7/145 (4%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 P ++ R + + + L+ + + + Sbjct: 17 PVSKIDEDAVNAEINRYRSELAQAQADLANCKNALANAKPEVKEVTKEVEV---AGPRAI 73 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYS 294 F S+ V ++ ++L + + + G+ D A N +LS RA Sbjct: 74 FFKIGSARLDDYGKVNIELAAKILKANPDKKYKVAGYAD--KATGSASWNQKLSEKRAQV 131 Query: 295 AYQVLMKSGVSEDRISKISGFAHHR 319 Y L+ GV +D++ + GF Sbjct: 132 VYDALIAQGVDKDQLELV-GFGGTE 155 >gi|269958634|ref|YP_003328421.1| putative outer membrane protein OmpA [Anaplasma centrale str. Israel] gi|269848463|gb|ACZ49107.1| putative outer membrane protein OmpA [Anaplasma centrale str. Israel] Length = 212 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 12/118 (10%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289 + FD + VL + E + + I GHTD+ N L Sbjct: 40 RVEKVYFDFNKYEIKGSGKKVLLGLVERMKADKMSTLLIVGHTDSR---GTEEYNLALGE 96 Query: 290 DRAYSAYQVLM--KSGVSEDRISKISGFAHHR-LKIASD-----PMNSANRRIDILVE 339 RA + + ++ +S ++ G A L +SD ++ NRR+ +++E Sbjct: 97 RRANAVKEFILGCDRSLSPRISTQSRGKAEPEILVYSSDFKEAEKAHAQNRRVVLIME 154 >gi|167561407|ref|ZP_02354323.1| cytochrome c oxidase, subunit II [Burkholderia oklahomensis EO147] Length = 505 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 19/152 (12%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + +A + L A +G F+ S + Sbjct: 363 QPKQVADARNGKLPEDAAQQAGDTAAPVAEASGAAAQAQALPAEIYFETGKSELPADAKD 422 Query: 251 VLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 + E + + +++ G TD + N L+ RA + L +G++E+RI Sbjct: 423 AIAAAAEYVKAHPDAKLALSGFTDKTGSAGA---NAELAKRRAQAVRDALKAAGIAEERI 479 Query: 310 S-----KISGFAHHRLKIASDPMNSANRRIDI 336 I+G A + + RR++I Sbjct: 480 ILKKPETITGGADAK--------EA--RRVEI 501 >gi|313887383|ref|ZP_07821073.1| outer membrane protein 41 [Porphyromonas asaccharolytica PR426713P-I] gi|312923151|gb|EFR33970.1| outer membrane protein 41 [Porphyromonas asaccharolytica PR426713P-I] Length = 387 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 9/108 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 T +F SS ++ L + E + + I + G+TD + A N LS Sbjct: 285 SDKTILFKFDSSRIDKNQMITLYNVSEYVKANNTPILVIGYTDTT---GDANYNLGLSER 341 Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 RA + L+ GVS D + + N R+ I+ Sbjct: 342 RAKAVANALINDFGVSAD-MITTQWEGATDKLFDTKSWN----RVVII 384 >gi|254449145|ref|ZP_05062596.1| OmpA family protein [gamma proteobacterium HTCC5015] gi|198261259|gb|EDY85553.1| OmpA family protein [gamma proteobacterium HTCC5015] Length = 397 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 28/276 (10%), Positives = 81/276 (29%), Gaps = 18/276 (6%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 P G FD + + + + + + + + + L + Sbjct: 134 RPIQVYARDNKSGTFDTFKSLVLGKKATLASRAKRYESNDQLSDDVAADLNGIGFTGLPS 193 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + L + + + N + L + + + K + Sbjct: 194 VRRSKPLAIAEGDNTPILPSELSVATEDYPLSRRLFLYNPFNDEPLLRDLVQFVKSQKGQ 253 Query: 190 KRLQD---LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 +++ +++ I+ G+ + + ++ F Sbjct: 254 QQVAKVGFISQNIAPYEVGVDSRAPSNYKATVQGAERLSLNFR-------FKPREYQLDN 306 Query: 247 ETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 + + + ++ + L + + + G +DA+ LS++R+ L+K G+ Sbjct: 307 KALQDVDRLVDFLQKNPQYKVVLAGFSDAAEEAAWRSY--ILSMERSDFVANQLIKKGIV 364 Query: 306 EDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + GF ++ NRR+++ V Sbjct: 365 PS---VVRGFGSTLQVASNHSEKGRDKNRRVEVWVR 397 >gi|332300804|ref|YP_004442725.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] gi|57918612|gb|AAW59418.1| outer membrane protein HMP [Porphyromonas asaccharolytica DSM 20707] gi|332177867|gb|AEE13557.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] Length = 387 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 9/108 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 T +F SS ++ L + E + + I + G+TD + A N LS Sbjct: 285 SDKTILFKFDSSRIDKNQMITLYNVSEYVKANNTPILVIGYTDTT---GDANYNLGLSER 341 Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 RA + L+ GVS D + + N R+ I+ Sbjct: 342 RAKAVANALINDFGVSAD-MITTQWEGATDKLFDTKSWN----RVVII 384 >gi|167009214|ref|ZP_02274145.1| probable OmpA family protein [Francisella tularensis subsp. holarctica FSC200] Length = 206 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 5/96 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + + F S + + L K + L + I + G+TD + N+ Sbjct: 69 MNINCRSVYFGFDSYNIIDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 125 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 L RA + Y L+ V++D+I +S + + Sbjct: 126 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 160 >gi|89255762|ref|YP_513124.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp. holarctica LVS] gi|115314256|ref|YP_762979.1| OmpA family protein [Francisella tularensis subsp. holarctica OSU18] gi|169656514|ref|YP_001427790.2| OmpA family peptidoglycan-associated lipoprotein [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367132|ref|ZP_04983165.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp. holarctica 257] gi|89143593|emb|CAJ78776.1| Peptidoglycan-associated lipoprotein [Francisella tularensis subsp. holarctica LVS] gi|115129155|gb|ABI82342.1| probable OmpA family protein [Francisella tularensis subsp. holarctica OSU18] gi|134252955|gb|EBA52049.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp. holarctica 257] gi|164551582|gb|ABU60834.2| peptidoglycan-associated lipoprotein, OmpA family [Francisella tularensis subsp. holarctica FTNF002-00] Length = 207 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 5/96 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWR 286 + + F S + + L K + L + I + G+TD + N+ Sbjct: 70 MNINCRSVYFGFDSYNIIDDAKECLDKTADYLIAHPDQPIKLSGNTDPR---GSEKYNFN 126 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 L RA + Y L+ V++D+I +S + + Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVS-YGKLKPAA 161 >gi|83953282|ref|ZP_00962004.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1] gi|83842250|gb|EAP81418.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1] Length = 317 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 65/191 (34%), Gaps = 14/191 (7%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 KG ++ + + + + ++A+ + A + Sbjct: 134 KGSLQSPDAVATLLVSTTDTSAYLQIVEADAQGQASSPSVPEVAEDTQALAPDAPAQSQS 193 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGH 271 + ++++ +D F ++ L + VL ++ + GH Sbjct: 194 EMAAALQNTGHVVLAALD------FGTGTAALGQGEFDALANLAAVLKDQPDLRIVLVGH 247 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA 330 TD+ ++N LS RA + + L+ G++ DRI G + ++ Sbjct: 248 TDSV---GGLQNNIALSRSRAAAVRRRLITAHGIAGDRIEA-QGMGYLSPIASNQTKAGR 303 Query: 331 --NRRIDILVE 339 NRR++ ++ Sbjct: 304 DANRRVEAVLL 314 >gi|300728041|ref|ZP_07061414.1| putative outer membrane protein [Prevotella bryantii B14] gi|299774643|gb|EFI71262.1| putative outer membrane protein [Prevotella bryantii B14] Length = 410 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 8/106 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S + L + E+L +V SI G+ + A N RL+ RA + Sbjct: 312 FAHNSHRLTQKEADKLNAVAEMLKAQPDVTLSINGYASDT---GSAGYNLRLTQLRADTV 368 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +L + G+ R+ + G R K + RR+++++ ++ Sbjct: 369 KMLLKRLGIDGHRLHPVIGKGIDR-KAPTGKEA---RRVELMMNEK 410 >gi|238028705|ref|YP_002912936.1| cytochrome c oxidase subunit II [Burkholderia glumae BGR1] gi|237877899|gb|ACR30232.1| Cytochrome c oxidase, subunit II [Burkholderia glumae BGR1] Length = 555 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 19/108 (17%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S + L + + +++ G TD + A N L+ RA Sbjct: 457 VYFDTGKSELPADAKAALDAAARYASAHPDAKLALSGFTDTT---GSADANAELAKRRAQ 513 Query: 294 SAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 + L +G++EDRI I+G A RR++I Sbjct: 514 AVRDALKAAGIAEDRIVLKKPQTITGGAD----------AGQARRVEI 551 >gi|163755163|ref|ZP_02162283.1| peptidoglycan-associated cytoplasmic membrane protein [Kordia algicida OT-1] gi|161324583|gb|EDP95912.1| peptidoglycan-associated cytoplasmic membrane protein [Kordia algicida OT-1] Length = 139 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 6/101 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 +S E+ +L + ++ +S ++ H+ R DN + RA + Sbjct: 40 SASLELKKESFKILDTLAVIIKNSNASYMVKSHST---LRGKQEDNLVKTQKRAEIIKEE 96 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 L+ GV R+ GF + + N RI+I+ Sbjct: 97 LINRGVDSTRLIA-KGFGETDRIYHTPTRIGDMKNDRIEIV 136 >gi|149377601|ref|ZP_01895340.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter algicola DG893] gi|149358143|gb|EDM46626.1| Outer membrane protein and related peptidoglycan-associated (lipo)protein [Marinobacter algicola DG893] Length = 148 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 6/101 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + + + + +L++ L H+ + I GH D ++ N LS RA SA Sbjct: 42 YGFNKHRLDEQDLAILRQHALYLRHNPGVTVRIHGHADNF---GVSEYNHFLSRLRASSA 98 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 +VL++ GV E ++ +SG+ R + ++ANRR+++ Sbjct: 99 AKVLIREGVRESQVL-VSGWGSDRPLARPE-DHAANRRLEL 137 >gi|89891400|ref|ZP_01202906.1| hypothetical protein BBFL7_00541 [Flavobacteria bacterium BBFL7] gi|89516431|gb|EAS19092.1| hypothetical protein BBFL7_00541 [Flavobacteria bacterium BBFL7] Length = 486 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 6/113 (5%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 I + F +S+ P ++ + + + + ++ G+ D N Sbjct: 377 INEGYVNVYFQFNSTKPALYSLGAINTLVTYMKDNPNATATLTGYADEL---GSPAYNKN 433 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILV 338 LS RA + VL+ SGV R+S +G + RR+ V Sbjct: 434 LSDRRAKMVHDVLVASGVDASRLSH-NGDGEDASVDKNSSEARQLVRRVTFRV 485 >gi|262382901|ref|ZP_06076038.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B] gi|262295779|gb|EEY83710.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B] Length = 389 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 14/148 (9%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI-----SIIDQR---NT 234 ++ + + L +I+ L + + V +I + N Sbjct: 230 EAELRNPQEIDALNSRINE-LYAQNQELAQRPVDCPDCPEPEVITEKVVEFEENPLINNV 288 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAY 293 +F + + P V + I + L + + + G+TD ++ N +LS +RA Sbjct: 289 VLFKINQTKVDPYQGVNIYNIAQYLKDNPQFKVRVIGYTDRK--TGTSQINEKLSAERAQ 346 Query: 294 SAYQVLM-KSGVSEDRISKISGFAHHRL 320 + ++L+ G+S DR+ + Sbjct: 347 NVARILISDYGISRDRVI-VEWVGDKEP 373 >gi|56694983|ref|YP_165329.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3] gi|56676720|gb|AAV93386.1| OmpA domain protein [Ruegeria pomeroyi DSS-3] Length = 518 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 12/154 (7%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + LA I++ + + + + V + + +S F+ SS P ++ Sbjct: 372 QGNRLANAIAAAGTEVPLTELQRLVSTLSGMQRLSLSFR-------FETGSSRPDAQSRT 424 Query: 251 VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL--MKSGVSEDR 308 + ++ + L S A N R++L RA + + + R Sbjct: 425 NISQLAQELESGAYDARQLLFVGFSDGDGAAEGNTRIALKRAEAVRDAVLQTAETLDPAR 484 Query: 309 I-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + + F D NRR+++ V+ Sbjct: 485 VEVSVDAFGEALPMACDDSDWGRQVNRRVEVWVK 518 >gi|288817919|ref|YP_003432266.1| peptidoglycan associated lipoprotein [Hydrogenobacter thermophilus TK-6] gi|288787318|dbj|BAI69065.1| peptidoglycan associated lipoprotein [Hydrogenobacter thermophilus TK-6] gi|308751517|gb|ADO45000.1| OmpA/MotB domain protein [Hydrogenobacter thermophilus TK-6] Length = 218 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 5/157 (3%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 D K+ L ++ A + + DL ++S L G+V D+ + E+ Sbjct: 46 DAIIEAKKKSEEALNKANEALGKANEALNKANDLEGRVSK-LEGIVDDHEKRIKALESRE 104 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIA 281 +++ FD L I + T + I G D + Sbjct: 105 IPKGGWQLEEIGAVYFDFDKFNIKKSQAPKLDDIASKIQSDTREVLIVGFADTR---GSS 161 Query: 282 RDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + N+ LS+ RA L K GV R+ +I+ + Sbjct: 162 KYNFNLSMYRAQIVASYLAKKGVDIGRM-RIASYGKE 197 >gi|150006545|ref|YP_001301289.1| major outer membrane protein OmpA [Bacteroides vulgatus ATCC 8482] gi|254881554|ref|ZP_05254264.1| major outer membrane protein OmpA [Bacteroides sp. 4_3_47FAA] gi|294778836|ref|ZP_06744253.1| OmpA family protein [Bacteroides vulgatus PC510] gi|319642938|ref|ZP_07997574.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_40A] gi|149934969|gb|ABR41667.1| major outer membrane protein OmpA [Bacteroides vulgatus ATCC 8482] gi|254834347|gb|EET14656.1| major outer membrane protein OmpA [Bacteroides sp. 4_3_47FAA] gi|294447289|gb|EFG15872.1| OmpA family protein [Bacteroides vulgatus PC510] gi|317385486|gb|EFV66429.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_40A] Length = 364 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 21/145 (14%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + I + + + + + + + + I F + E +V +Q + Sbjct: 235 KEVIKEVVREVPKEVVKEVIKEVPSAAEVAI---------FFKIGKAKISSEGMVNVQLM 285 Query: 256 GEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + + + I G D A N LS RA + Y L+ GV E ++ K++ Sbjct: 286 AKAIKANPNAKYKIAGFAD--KATGSASFNQTLSEKRAQAVYDALVAEGVKESQLEKVA- 342 Query: 315 FAHHRLKIASDPMNSAN--RRIDIL 337 D M N R+ IL Sbjct: 343 MGGT------DNMFGKNYLNRVVIL 361 >gi|76818337|ref|YP_337657.1| OmpA family protein [Burkholderia pseudomallei 1710b] gi|76582810|gb|ABA52284.1| OmpA family protein [Burkholderia pseudomallei 1710b] Length = 252 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 21/117 (17%) Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289 +F S P L +I L + I + G+TD N +LSL Sbjct: 134 LFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTDAYNRQLSL 190 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA----------NRRIDI 336 RA + L G+ D I G ++ +RR+ I Sbjct: 191 ARAETIRAYLTTRGLPGDLIVA-QGLGKADPV-SNGCPAGRSAEAIACLAPDRRVRI 245 >gi|152993089|ref|YP_001358810.1| hypothetical protein SUN_1502 [Sulfurovum sp. NBC37-1] gi|151424950|dbj|BAF72453.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 405 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 70/205 (34%), Gaps = 26/205 (12%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 + S+ + + + + + K+K +++ L ++ L Sbjct: 191 DQLSDVNETVQEKDKKLLELLNALDEKETKYDTLVENLQKQKAKIKSLTGIKLKVIAALK 250 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE---------- 257 + + + + + +S + +FDK S++ E L+K E Sbjct: 251 -EALGDKIDIDKKSGSLRLS-----SNILFDKGSAVLKDEAKAQLKKAFEEYIGTLVTNP 304 Query: 258 VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM------KSGVSEDRISK 311 + + I I GHTD+ N LS RA++ L+ K + I+ Sbjct: 305 KIKPHLDKIIIEGHTDSD---GGYLYNLDLSQRRAFAVMHYLLTLDFAKKYNLQPLMIAS 361 Query: 312 ISGFAHHRLKIASDPMNSANRRIDI 336 + + +++ RRI+I Sbjct: 362 GRSYLDAIKVNGVEDKDAS-RRIEI 385 >gi|149911217|ref|ZP_01899841.1| putative outer membrane protein OmpA [Moritella sp. PE36] gi|149805744|gb|EDM65742.1| putative outer membrane protein OmpA [Moritella sp. PE36] Length = 327 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 9/116 (7%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + + +FD + S L LQ++ L + + + G+ DA + N Sbjct: 206 VQLETFSFAIIFDFAKSEVL--LKNDLQQVVTRLNKHPQATVELTGYADA---KGTEAFN 260 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 LS R L++ GV ++I++ I +D NR + +L+ Sbjct: 261 LTLSKARVKHVSDYLIEQGVKAEQITEHH-LGEAEPVIGNDTDEHRHLNRHVQVLL 315 >gi|327405464|ref|YP_004346302.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327320972|gb|AEA45464.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 463 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 49/140 (35%), Gaps = 12/140 (8%) Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 + ++ V + + ++ FD + S +++ + + + + ++ Sbjct: 1 MNKLIPFVFVLISTFHSNAQDFCKASSVFFDLNKSELKSGGQMMVDSLVKSMNGTDFILE 60 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + G+TD N N +LS R + L ++ I + + Sbjct: 61 VYGYTDT---SNTLDYNRKLSQSRIDAVLAYLKSKQIAPKEIRTFN-EGEDF----NSSN 112 Query: 328 NSAN----RRIDILVEDRQG 343 S N RR+DI + +G Sbjct: 113 QSKNAAFQRRVDIYLTPMEG 132 >gi|260429564|ref|ZP_05783541.1| OmpA/MotB [Citreicella sp. SE45] gi|260420187|gb|EEX13440.1| OmpA/MotB [Citreicella sp. SE45] Length = 517 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 47/164 (28%), Gaps = 12/164 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + LA I+ + V + S F+ Sbjct: 360 DQAPEELALNLQGDRLANAIAVAEGEGGLALLQHMVTALAPMRRLTTSFR-------FEP 412 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S ++ +Q++ L S + A N ++ RA + + Sbjct: 413 GSVRLDAQSRSNVQQLARSLEAGEYDGRELVFVGFSDGQGDADANLEIARKRADAVRTAV 472 Query: 300 MKSGVSE--DRI-SKISGFAHHRLKIASDPMNSA--NRRIDILV 338 ++ + DRI F D + NRR+++ V Sbjct: 473 EQAAEAADLDRIGMATEAFGEAMPMACDDTVWGRQVNRRVEVWV 516 >gi|84385694|ref|ZP_00988725.1| hypothetical protein V12B01_26209 [Vibrio splendidus 12B01] gi|84379674|gb|EAP96526.1| hypothetical protein V12B01_26209 [Vibrio splendidus 12B01] Length = 187 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 10/117 (8%) Query: 228 IIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 + DQ + + + + + + E L + I I GHTD N Sbjct: 76 VFDQESMSLLLNYKTDKHSLTDKHKQAIAQYLE-LVDQDKKIVIEGHTDDI---GSKAYN 131 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVE 339 +LS R SA L K+ +RI + F + + + NRR+ + ++ Sbjct: 132 KKLSQRRTSSATVYLKKNLGLGNRIIE-KAFGESSPICKVEENAASGCNRRVILTIK 187 >gi|312961582|ref|ZP_07776082.1| major outer membrane protein OmpAII [Pseudomonas fluorescens WH6] gi|311284165|gb|EFQ62746.1| major outer membrane protein OmpAII [Pseudomonas fluorescens WH6] Length = 309 Score = 60.0 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 15/142 (10%), Positives = 39/142 (27%), Gaps = 8/142 (5%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF-DKSSSIP 244 + ++ L ++ + + + F Sbjct: 144 AEAERDLAGSRAQVQALSRASKVQQCNSLAMAPVEAAQFKDYALSGDVLFAFGKSGYQDI 203 Query: 245 LPETIVVLQKIGEVLAHST---EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + + ++ L + + + GHTD N L L RA + ++L+ Sbjct: 204 SSRGRIAILELITQLNREHAKLDRVEVVGHTDPI---GSYAANQALGLKRAQTVRRLLID 260 Query: 302 SGVSEDRISKISGFAHHRLKIA 323 G+ + ++ S + Sbjct: 261 GGLPANAVTARSA-GSSEPIVD 281 >gi|294338941|emb|CAZ87285.1| Conserved hypothetical protein; putative OmpA/MotB domain [Thiomonas sp. 3As] Length = 169 Score = 60.0 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 11/141 (7%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 SS + A + G + + + F + L+++ E + Sbjct: 39 SSAMQAASAPAVASSAAPAADADGARVVVENGVIKFYFASGKADLAAGADAALKQVSEAV 98 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 A + I G+ DA+ A N L+ RA + L+ GV DRI+ + Sbjct: 99 AQ-GHTVVINGYHDAT---GSAALNAELAKKRAMAVRDALVAQGVPADRITL------EK 148 Query: 320 LKIASDPM-NSANRRIDILVE 339 + + RR+++ V+ Sbjct: 149 PAETTGGASAAEARRVEVTVK 169 >gi|119775139|ref|YP_927879.1| OmpA family protein [Shewanella amazonensis SB2B] gi|119767639|gb|ABM00210.1| conserved hypothetical OmpA family protein [Shewanella amazonensis SB2B] Length = 240 Score = 60.0 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 16/169 (9%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 L E ++ LA + T + L + G+ + Sbjct: 74 QALATQDAEIERLAQKSANYDALASDYAITRAQLNTLQTAREAKLTELTLGLNVQ----- 128 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F SS P LQ + V+ + VI ++G D + N LS R Sbjct: 129 ----FKTGSSDIEPHFQNQLQAVARVMEAQPDLVIDLKGFADRR---GDSDYNQALSEQR 181 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 + L+ +GV+ DR+ + F A S +RR+ + + Sbjct: 182 LANVKAYLVSAGVASDRL-QGKAFGATAPLSADAGFESDFFDRRVTLEL 229 >gi|254463910|ref|ZP_05077321.1| outer membrane protein, OmpA/MotB family [Rhodobacterales bacterium Y4I] gi|206684818|gb|EDZ45300.1| outer membrane protein, OmpA/MotB family [Rhodobacterales bacterium Y4I] Length = 694 Score = 60.0 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 50/169 (29%), Gaps = 10/169 (5%) Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTR 221 D + K LP + + + D Sbjct: 507 DDTQKAEKVVVNELPQVQDNRRAFSSTGAVSAQDLAAALAAQEAPKVDRRFSLAQVRNID 566 Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASP 276 + + ++ FD S++ P+ L +G L + I GHTDA Sbjct: 567 AVRRLVPVINVDSVNFDTGSAVIRPQEAEELATLGNALRDLIDRNPAEVFLIEGHTDAV- 625 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324 A N LS RA + L + V + + + G+ L +++ Sbjct: 626 --GAATYNLALSDRRAETVALALTEYFDVPPENMV-VQGYGESDLAVST 671 >gi|330811342|ref|YP_004355804.1| hypothetical protein PSEBR_a4391 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379450|gb|AEA70800.1| Conserved hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 325 Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 8/98 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYS 294 F ++ LQ + + + V + GH+D N LS RA + Sbjct: 178 FPGEAAELDAHAKAQLQVMLDFIKADPSVNHVELDGHSDN---SGNRLTNRELSRRRALA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332 +G E +I + + + N+ANR Sbjct: 235 VQDFFKANGFQESQI-TLRFHGERYPLVPN--TNAANR 269 >gi|83944241|ref|ZP_00956696.1| OmpA domain protein [Sulfitobacter sp. EE-36] gi|83844785|gb|EAP82667.1| OmpA domain protein [Sulfitobacter sp. EE-36] Length = 317 Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 65/191 (34%), Gaps = 14/191 (7%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 KG ++ + + + + ++A+ + A + Sbjct: 134 KGSLQSPDAVATLLVSTTDTSAYLQIVEADAQGQASSPSVPEVAEDTRTLAPDAPAQSQS 193 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGH 271 + ++++ +D F ++ L + VL ++ + GH Sbjct: 194 EMAAALQNTGHVVLAALD------FGTGTAALGQGEFDALSNLAAVLKDQPDLRIVLVGH 247 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSA 330 TD+ ++N LS RA + + L+ G++ DRI G + ++ Sbjct: 248 TDSV---GGLQNNIALSRSRAAAVRRRLITAHGIAGDRIEA-QGMGYLSPIASNQTKAGR 303 Query: 331 --NRRIDILVE 339 NRR++ ++ Sbjct: 304 DANRRVEAVLL 314 >gi|294142661|ref|YP_003558639.1| OmpA family protein [Shewanella violacea DSS12] gi|293329130|dbj|BAJ03861.1| OmpA family protein [Shewanella violacea DSS12] Length = 334 Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 5/114 (4%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWR 286 + + +F SS L ++ V + + G D+ A N + Sbjct: 216 VEQKSTAVLFGFDSSELSTTAQAKLDEVVRVSKLNDNDTILLIGQADSR---GDAGYNQK 272 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 LS RA L+ GV ++ + +S + RR+ I + Sbjct: 273 LSEARAQHVEDYLVSHGVEVQQLGHQAS-GEQDSHASSSQDRAQERRVIITLTS 325 >gi|229588694|ref|YP_002870813.1| putative exported flagellar protein [Pseudomonas fluorescens SBW25] gi|229360560|emb|CAY47417.1| putative exported flagellar protein [Pseudomonas fluorescens SBW25] Length = 302 Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 24/90 (26%), Gaps = 6/90 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F L I + I + GH+D N +S R + Sbjct: 178 FPGGGIELDAAAKKKLDVILAFMKADPTVNHIELNGHSDN---GGNRLTNRDVSRRRGLA 234 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 L +G+ E +I + + Sbjct: 235 VMDYLKANGIPESQI-TLRFHGESYPLAPN 263 >gi|53713209|ref|YP_099201.1| hypothetical protein BF1919 [Bacteroides fragilis YCH46] gi|60681476|ref|YP_211620.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343] gi|253566878|ref|ZP_04844330.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|52216074|dbj|BAD48667.1| hypothetical protein [Bacteroides fragilis YCH46] gi|60492910|emb|CAH07686.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343] gi|251944441|gb|EES84930.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 399 Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 8/121 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + I + +V + K + + + D + F + E+ + L KI Sbjct: 247 QYIDRPVDRIVERIVEKRIEVPAVVESHVCDLFDNIH---FAFDKDVITSESEITLDKIA 303 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 ++L I G+TDA N LS RA + Y L+K V + K G Sbjct: 304 DLLKSYPDNNFLITGYTDAR---GSDNYNIDLSKRRAKAVYSALLKRQV-PQHMLKWRGV 359 Query: 316 A 316 Sbjct: 360 G 360 >gi|265763305|ref|ZP_06091873.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263255913|gb|EEZ27259.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|301162933|emb|CBW22480.1| putative outer membrane protein [Bacteroides fragilis 638R] Length = 399 Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 8/121 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 + I + +V + K + + + D + F + E+ + L KI Sbjct: 247 QYIDRPVDRIVERIVEKRIEVPAVVESHVCDLFDNIH---FAFDKDVITSESEITLDKIA 303 Query: 257 EVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 ++L I G+TDA N LS RA + Y L+K V + K G Sbjct: 304 DLLKSYPDNNFLITGYTDAR---GSDNYNIDLSKRRAKAVYSALLKRQV-PQHMLKWRGV 359 Query: 316 A 316 Sbjct: 360 G 360 >gi|167765326|ref|ZP_02437439.1| hypothetical protein BACSTE_03714 [Bacteroides stercoris ATCC 43183] gi|167696954|gb|EDS13533.1| hypothetical protein BACSTE_03714 [Bacteroides stercoris ATCC 43183] Length = 391 Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 8/115 (6%) Query: 224 ILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIAR 282 + D + F+ + + L ++ +L + I G+TDA + Sbjct: 267 VEAMACDLLDNIYFEFDKDVLTAASEKTLDRLAGLLKSYPDARFLITGYTDAR---GSSA 323 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR---LKIASDPMNSANRRI 334 N LS RA Y+ L++ GV + K G A + + +R++ Sbjct: 324 YNTDLSNRRAKRVYEALLERGVPAA-MLKWHGIGKRASIIPVAAGNSVREGDRKV 377 >gi|153874379|ref|ZP_02002623.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152069157|gb|EDN67377.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 275 Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 89/283 (31%), Gaps = 28/283 (9%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 N L+ I P + KID T++ + Q K Sbjct: 6 NFMKLTLLLMVSMILLVSCAPPKKPAPKIDSQKPPSQTQSPT-YQDSPVYQDKMVDTTTL 64 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + L+ ++ ++ + S K L + N E S + Sbjct: 65 DERVLAQTKPTDDEPYA----SLDTKTLLAKAETLYGNNAYEEALPFFKSAATREDGQLA 120 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN---TPMFDKSSSIP-- 244 K L + A+ + IS+ + +F+ S+ Sbjct: 121 KTYAGLYQTQMKLKHQSDAEQA--------FAQLLAISLKESNQLNFRFLFEVGSTEFVN 172 Query: 245 ----LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 E L++I + + I GH D +LSL RA + Q+++ Sbjct: 173 DQALRTEYSFWLREIAKYFQNRKSCFQIVGH---RGKNEKRNDAQKLSLLRAKAVQQIMI 229 Query: 301 KSGVSEDRISKISGFAHHRL---KIASDPMNSANRRIDILVED 340 S SK+ G + ++D M++ +RR++I+V D Sbjct: 230 THSPSITFQSKVLGKGNSENLSGIGSNDVMDTLDRRVEIVVVD 272 >gi|328470528|gb|EGF41439.1| hypothetical protein VP10329_07007 [Vibrio parahaemolyticus 10329] Length = 187 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 L + + I + GHTD N LSL RA +A + L K +RI + F Sbjct: 109 LVNEDKRILVEGHTDDV---GSQAYNKSLSLRRASTASKYLKKDLELGNRIVE-KAFGES 164 Query: 319 RLK--IASDPMNSANRRIDILVE 339 + + ++ NRR+ + +E Sbjct: 165 APICKVNENKLSGCNRRVVLTIE 187 >gi|300023926|ref|YP_003756537.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525747|gb|ADJ24216.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 262 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 58/202 (28%), Gaps = 5/202 (2%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 + + L D + L R + + Sbjct: 30 AQEDDDGPNGETAAELLVDGMDAASDRAYDSARRLFQKLISAFPDSPEAARARRALSSLG 89 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 S ++ E T +I + F +SS+ + +++ L Sbjct: 90 SDGDTEEGRAAIRADEAERTAEYRHAFLISVGDRVFFAESSAELGGRALAIIEGQARWLK 149 Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI-SKISGFAHH 318 I++ G +D R LS RA + L+ +G+ R+ + +G Sbjct: 150 LRPNLTITVIGRSDD---GGDRRSAQTLSKQRAEAVRDRLIAAGLDASRVDLRPTGNDDK 206 Query: 319 RLKIASDPMNSANRRIDILVED 340 ++ + NR ++ + D Sbjct: 207 VAVCSTSMCRAQNRNAEVFIND 228 >gi|330997212|ref|ZP_08321065.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841] gi|329571007|gb|EGG52714.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841] Length = 377 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 12/147 (8%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 +S + A + + LQ+ K I+ L K T ++ Sbjct: 222 AALNATISSMEAEAAGKDRALQNAQKTINDLQKDLNDCKNKKVPTTATQ------TVEKN 275 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 +F +SSS + + ++ L ++ ++I G+ A+ N +LS Sbjct: 276 EYVVIFRQSSSKVDALQMPNIDRLASYLKKNSNAKVTISGYASPE---GNAKFNQKLSEK 332 Query: 291 RAYSAYQVLMK-SGVSEDRISKISGFA 316 RA + +L+K G+S +RI G Sbjct: 333 RAEAVKNILVKEYGISANRIET-QGKG 358 >gi|224418309|ref|ZP_03656315.1| putative flagellar motor protein [Helicobacter canadensis MIT 98-5491] gi|253827631|ref|ZP_04870516.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491] gi|253511037|gb|EES89696.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491] Length = 276 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 65/173 (37%), Gaps = 19/173 (10%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 + + + +K + + + + +L V ++ K + Sbjct: 75 QQADITTDPETAEQIIKVQSEILEFKEDARVSLGPSVVEDDGKEGFILRFHGRL------ 128 Query: 231 QRNTPMFDKSSSIP-LPETIVVLQKIGEVLAHSTEVIS--IRGHTDASPFRNI--ARDNW 285 +FD+ + + I+ L+++ +L + + I G+ D + +D+ Sbjct: 129 -----LFDEEKTAIENADEILFLKRLALILQKMPQTMHLDIIGYADNVEGKPNLKYQDSL 183 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336 LS RA + ++L+++ V+ +I+ + G + + NRR++ Sbjct: 184 GLSALRASNVAKILIENQVNPQKITSLGG-GATNFLLPNTNAENRAQNRRVEF 235 >gi|255263090|ref|ZP_05342432.1| OmpA domain protein [Thalassiobium sp. R2A62] gi|255105425|gb|EET48099.1| OmpA domain protein [Thalassiobium sp. R2A62] Length = 521 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 65/219 (29%), Gaps = 11/219 (5%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + ++ + LT + D + + + + Sbjct: 304 LTVTADRTRLRTEDYPLTIPLFLYLPQRRLPDAAMAFLNYVRSPEAQRVVRRAGFVDQAG 363 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 + + + ++ + +L + T F+ S+ ++ Sbjct: 364 VPTAIKGQGDRLATAILNAGEEVPLTELQRMMRVLGKLERLSMTFRFEVGSTRLDAQSRS 423 Query: 251 VLQKIGEVLA---HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA-YQVLMKSGVSE 306 ++ L H + + G +DA A +N +LS RA + +V + G +E Sbjct: 424 NAARMARDLRAGVHRDQRLIFVGFSDAR---GPASENRKLSSARAEAVQRRVNVALGETE 480 Query: 307 --DRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 D + F D NRR+++ V R Sbjct: 481 LSDFTLETEAFGEALPMACDDTEWGRQVNRRVEVWVGPR 519 >gi|228470997|ref|ZP_04055842.1| outer membrane protein HMP [Porphyromonas uenonis 60-3] gi|228307394|gb|EEK16408.1| outer membrane protein HMP [Porphyromonas uenonis 60-3] Length = 388 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 9/108 (8%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 T +F SS ++ L + E + I + G+TD + A+ N LS Sbjct: 286 SDKTILFKFDSSRIDKNQMITLYNVSEYVKAHNTPILVIGYTDTT---GNAQYNLGLSER 342 Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 RA + + L+ GVS D + + + N R+ I+ Sbjct: 343 RAKAVAKALVNDFGVSAD-MITTQWEGATDKLFDTK---AWN-RVVII 385 >gi|190895030|ref|YP_001985323.1| putative outer membrane lipoprotein [Rhizobium etli CIAT 652] gi|190700691|gb|ACE94773.1| probable outer membrane lipoprotein [Rhizobium etli CIAT 652] gi|327194360|gb|EGE61220.1| putative outer membrane lipoprotein [Rhizobium etli CNPAF512] Length = 178 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 9/111 (8%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 I++ F + S+ + L L + + ++G D Sbjct: 62 ILNVGRRIYFKQDSATLDSVAMATLDNQAAWLNRNPTWLLKLQGFADD---SGSPSKMQT 118 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334 LS RA +A L GV R+ G+ + R S NRR+ Sbjct: 119 LSQKRADAAMAYLASKGVDPKRMWA-KGYGNDREVRDC-TDRSCKVQNRRV 167 >gi|218259848|ref|ZP_03475401.1| hypothetical protein PRABACTJOHN_01060 [Parabacteroides johnsonii DSM 18315] gi|218224884|gb|EEC97534.1| hypothetical protein PRABACTJOHN_01060 [Parabacteroides johnsonii DSM 18315] Length = 403 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 14/154 (9%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI-----SIIDQ 231 + ++ + + L +I+ L + + V +I D Sbjct: 236 KTAAFSEAELRNPQEIDALNSRINE-LYAQNQELAQRPVDCPDCPEPEVITEKVVEFEDN 294 Query: 232 R---NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRL 287 N +F + + P V + I + L + + + G+TD ++ N +L Sbjct: 295 PLINNVVLFKINQTKVDPYQGVNIYNIAQYLKDNPQFKVRVIGYTDRK--TGTSQINEKL 352 Query: 288 SLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRL 320 S +RA + ++L+ +S DRI + Sbjct: 353 SAERAQNVARILISDYNISRDRIK-VEWVGDKEP 385 >gi|302879780|ref|YP_003848344.1| peptidoglycan-associated lipoprotein [Gallionella capsiferriformans ES-2] gi|302582569|gb|ADL56580.1| peptidoglycan-associated lipoprotein [Gallionella capsiferriformans ES-2] Length = 169 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 7/107 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + + S ++Q + L+ + G+ D N L R Sbjct: 62 RSVFYPFDVSAVQDADKPLVQAHAKYLSEHANRTVKLEGNCDER---GSNEYNLGLGQRR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDI 336 A ++L G +++ +S + K A + S NRR D+ Sbjct: 119 ADGVQKMLELGGAKAAQVTSVS-YGEEMPKAAGHDEASWSQNRRTDL 164 >gi|307566204|ref|ZP_07628655.1| OmpA family protein [Prevotella amnii CRIS 21A-A] gi|307345097|gb|EFN90483.1| OmpA family protein [Prevotella amnii CRIS 21A-A] Length = 230 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 63/214 (29%), Gaps = 22/214 (10%) Query: 144 KNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTL 203 K + + +++ + DL S+ L L + + L KI + L Sbjct: 5 KLAKSDENDSNPFSQSTGDLMASLLFIFILLLSSLMLQVKKQEDSDRALTKNYAKIKTQL 64 Query: 204 SGLVADNIVKGVLF-ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE----- 257 + + +++ Q + +FD + + P +L Sbjct: 65 YIDLEHEFKDSLKVWNAVIDSTELAVRFQEPSTLFDYNKTDLKPRFAAILHDFFPRYMAL 124 Query: 258 ----VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI---- 309 + E I I GHTD+ N LS DR S + ++ Sbjct: 125 LSKPQYKDNIEEIRIEGHTDS---SGGYIYNMELSQDRTRSVLAFCLNQ-ITRKDFEWAK 180 Query: 310 --SKISGFAHHRLKI--ASDPMNSANRRIDILVE 339 +G + I +RR++ + Sbjct: 181 YAITANGLSSSHPIIGKDGKEDADRSRRVEFKIR 214 >gi|167616252|ref|ZP_02384887.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia thailandensis Bt4] gi|257142822|ref|ZP_05591084.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia thailandensis E264] Length = 267 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 36/116 (31%), Gaps = 19/116 (16%) Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289 +F S P L +I L + I + G+TD N +LSL Sbjct: 149 LFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTNTYNRQLSL 205 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-----NRRIDI 336 RA + + L G+ + I G + +RR+ I Sbjct: 206 ARAEAIREYLTTRGLPGNLIVA-QGLGKADPVSNGCPDGHSAEAIACLAPDRRVRI 260 >gi|93005425|ref|YP_579862.1| OmpA/MotB [Psychrobacter cryohalolentis K5] gi|92393103|gb|ABE74378.1| OmpA/MotB [Psychrobacter cryohalolentis K5] Length = 194 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 38/106 (35%), Gaps = 7/106 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 +D++SS E L G+ + + V+ I GH N N LS Sbjct: 85 EARAYYDENSSEIKSEYYEQLDNAGKKMQDHLDAVMHIEGHISKREDNNA---NQTLSRY 141 Query: 291 RAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS-ANRRI 334 R + + DRI I + R +D NS N+RI Sbjct: 142 RVEEIKNYMTMTYNIDPDRIKTIY-YGSERPIATNDAENSWLNQRI 186 >gi|332293191|ref|YP_004431800.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332171277|gb|AEE20532.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 236 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 7/83 (8%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHH 318 H + ++I GHTD ++DN+ L + L + G+ +I+ S Sbjct: 158 KHPEKKVTILGHTDNV---GSSKDNFDQGLKMSRQVKWYLTARRGIPRHKITATS-RGEE 213 Query: 319 RLKIASD--PMNSANRRIDILVE 339 + N RI+I+V+ Sbjct: 214 EPIANNKSLSGRQENNRIEIIVD 236 >gi|89067386|ref|ZP_01154899.1| OmpA domain protein [Oceanicola granulosus HTCC2516] gi|89046955|gb|EAR53009.1| OmpA domain protein [Oceanicola granulosus HTCC2516] Length = 485 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 51/159 (32%), Gaps = 18/159 (11%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + Q A+ I + + R + + F + ++ P++ Sbjct: 337 RDQGQRFARAILDAGRETRLSELQRMTRLLAPRVRLSTTFR-------FGRGATELDPQS 389 Query: 249 IVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS--G 303 L ++ + + G TD A N RL +RA L+ + G Sbjct: 390 RTNLFQLAADIRDGAHDGQTLLLLGFTDGI---GPASANRRLGAERADEVLATLLAALGG 446 Query: 304 VSEDRI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + + + GF D NRR+++ V+ Sbjct: 447 ALPEGVEVRTEGFGEALPMGCDDTEWGRQINRRVELWVD 485 >gi|295677467|ref|YP_003605991.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] gi|295437310|gb|ADG16480.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002] Length = 340 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 63/188 (33%), Gaps = 23/188 (12%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 ++ + P ++ + + ++ L++ + + +V+ Sbjct: 155 PVDSNGAPVVVPRNEAETQLQGMRAQMHVLSRASAVQACDYPSVPVVQPAAAAQPAVVKN 214 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTDASPFRNIAR 282 ++ S + + ++ E + S E +++ GH D Sbjct: 215 YTLKGDTLFAFGKSGSRDMTGKGQAEISRLAEKILAENASLEAVTVIGHAD---LIGSDA 271 Query: 283 DNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA------------SDPMNSA 330 +L RA + ++L++ GV +I+ S + +A ++P Sbjct: 272 AAQKLGEQRAMTVRRMLIEQGVPTLKITAESA-GNSDPVVAECSGTMQRKIACNEP---- 326 Query: 331 NRRIDILV 338 NRR+ + V Sbjct: 327 NRRVVVRV 334 >gi|170739034|ref|YP_001767689.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46] gi|168193308|gb|ACA15255.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46] Length = 624 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 10/110 (9%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFRNIARDNW 285 +T F+ S P+ L I E + + E I GHTDA DN Sbjct: 503 DIDTITFETGSWQVAPDQARRLAAIAEAIRRAVEHNPQEVFLIEGHTDAV---GSEVDNL 559 Query: 286 RLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 LS RA VL + V + ++ G+ LK+ + N NRR+ Sbjct: 560 SLSDRRAQEVAAVLTRDFRVPPENLTT-QGYGEQYLKVNTQEANRENRRV 608 >gi|90022258|ref|YP_528085.1| OmpA family protein [Saccharophagus degradans 2-40] gi|89951858|gb|ABD81873.1| OmpA/MotB [Saccharophagus degradans 2-40] Length = 482 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 10/154 (6%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 Q++ +I ++ T + + + F S+ + + Sbjct: 307 QEIVNQIGFISQNPLSLQSELYADAPQTYKVLTENAMRLSVNFRFKDGSAELDNKAKQDI 366 Query: 253 QKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +I + I + G D+ + LS RA + L G+S + Sbjct: 367 LRIVRYMQMPENADKRIQLVGFGDSKETAARST---VLSKLRAVAVKSALYSYGISSE-- 421 Query: 310 SKISGFAHHRLKIASD-PMNSANRRIDILVEDRQ 342 + G ++ N+R+++ V D Q Sbjct: 422 -SVLGLGSDLPVASNAGSARLKNQRVEVWVFDSQ 454 >gi|28900586|ref|NP_800241.1| hypothetical protein VPA0731 [Vibrio parahaemolyticus RIMD 2210633] gi|153840625|ref|ZP_01993292.1| outer membrane protein [Vibrio parahaemolyticus AQ3810] gi|260365466|ref|ZP_05778003.1| outer membrane protein [Vibrio parahaemolyticus K5030] gi|260877531|ref|ZP_05889886.1| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|260897528|ref|ZP_05906024.1| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|260901730|ref|ZP_05910125.1| outer membrane protein [Vibrio parahaemolyticus AQ4037] gi|28808966|dbj|BAC62074.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|149745713|gb|EDM56843.1| outer membrane protein [Vibrio parahaemolyticus AQ3810] gi|308087083|gb|EFO36778.1| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|308090536|gb|EFO40231.1| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|308108906|gb|EFO46446.1| outer membrane protein [Vibrio parahaemolyticus AQ4037] gi|308114281|gb|EFO51821.1| outer membrane protein [Vibrio parahaemolyticus K5030] Length = 187 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 L + + I + GHTD N LSL RA +A + L K +RI + F Sbjct: 109 LVNEDKRILVEGHTDDV---GSQAYNKSLSLRRASTASKYLKKDLGLGNRIVE-KAFGES 164 Query: 319 RLK--IASDPMNSANRRIDILVE 339 + + ++ NRR+ + +E Sbjct: 165 APICKVNENKLSGCNRRVVLTIE 187 >gi|163794640|ref|ZP_02188610.1| OmpA/MotB [alpha proteobacterium BAL199] gi|159179913|gb|EDP64438.1| OmpA/MotB [alpha proteobacterium BAL199] Length = 215 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 11/114 (9%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF----RNIARDNWRLS 288 +T F SS+ L K+ + S + + GH A R N+ +S Sbjct: 103 STVYFGHSSARLTGTERAELAKVAQTAIASGAAVRVIGHASARTADLDLRAHEVANFTMS 162 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRL----KIASDPMNSANRRIDILV 338 L RA + VL+ +G+ +RI +I + + + NRR+++ + Sbjct: 163 LKRANAVADVLIHAGLPANRI-RIDALGDSQPEFYEVMP--SGEAGNRRVEVFL 213 >gi|302035839|ref|YP_003796161.1| hypothetical protein NIDE0460 [Candidatus Nitrospira defluvii] gi|300603903|emb|CBK40235.1| exported protein of unknown function, OmpA family [Candidatus Nitrospira defluvii] Length = 236 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 7/96 (7%) Query: 241 SSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ + +V L + L + + + I GH D N L RA +A L Sbjct: 138 YSVSDNDGVVSLTTNADWLKENPKALLKISGHCDER---GTHDYNLVLGEKRAKAAKSFL 194 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMN--SANRR 333 + GV+ ++ I + R A NRR Sbjct: 195 VDLGVNAKQV-AIVSYGKDRPFCADHDEACHQQNRR 229 >gi|88607299|ref|YP_504946.1| OmpA family protein [Anaplasma phagocytophilum HZ] gi|88598362|gb|ABD43832.1| OmpA family protein [Anaplasma phagocytophilum HZ] Length = 205 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 12/123 (9%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDN 284 ++ + FD V+ ++ E L + + GH DA+ + Sbjct: 41 VAFAKKVEKVYFDIGKYDLKGPGKKVILELVEQLRQDDSMYLVVIGHADAT---GTEEYS 97 Query: 285 WRLSLDRAYSAYQVLM--KSGVSEDRISKISGFAHHR-LKIASDPMN-----SANRRIDI 336 L RA + Q ++ ++ ++ G A L ++D + NRR I Sbjct: 98 LALGEKRANAVKQFIIGCDKSLAPRVTTQSRGKAEPEVLVYSTDAQEVEKANAQNRRAVI 157 Query: 337 LVE 339 +VE Sbjct: 158 VVE 160 >gi|209965626|ref|YP_002298541.1| OmpA family protein [Rhodospirillum centenum SW] gi|209959092|gb|ACI99728.1| OmpA family protein [Rhodospirillum centenum SW] Length = 314 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 76/237 (32%), Gaps = 41/237 (17%) Query: 143 CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISST 202 + + S + + ++ L + K++ + ++ ++ + Sbjct: 44 AEEKVVDLSRYEEVVNEARRLTEEAAKQKQENEELRRLLTQAVAQLERDIESRRSMRNQM 103 Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS 262 L L A +GV ++ + +F+ ++ E ++ + ++L Sbjct: 104 LQSLEASLDRQGVRVTLDPESGILRL---SGDLLFETGKAVYREEADRTVKVMADILGSV 160 Query: 263 TEVIS-------------------IRGHTDASPFRN-----IARDNWRLSLDRAYSAYQV 298 + + GHTD PFRN N RLS +RA + +Q Sbjct: 161 LPCFAEGASVACPGERMPILEAVLVEGHTDRQPFRNVPPAQSQALNDRLSTERALAVFQS 220 Query: 299 LMK--------SGVSEDRISKISGFAHHRLK--IASDPMN--SANRRID--ILVEDR 341 L + S + +SG+ R NRRID ++ R Sbjct: 221 LRETSPVLETLRNPSGQPLLGVSGYGERRPLPEAQGTTEEDYRRNRRIDLRFVLSSR 277 >gi|332665245|ref|YP_004448033.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332334059|gb|AEE51160.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 798 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F + + + ++ L + + + I HT+ + N A L+ R Sbjct: 690 ENIIFLSNQAELDSSAYSEIHRLASFLNANPQLGVEIVAHTNNNCTYNFAA---DLTARR 746 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 A ++L+ + ++ +RI + G + +++ + N+R++I Sbjct: 747 AEKIAELLIDAQIAAERI-RHRGSGKEQPLVSNATLTGRLANQRVEIT 793 >gi|300790394|ref|YP_003770685.1| OmpA family protein [Amycolatopsis mediterranei U32] gi|299799908|gb|ADJ50283.1| OmpA family protein [Amycolatopsis mediterranei U32] Length = 242 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 9/115 (7%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARD 283 I + F+ ++ P+ + + LA + + GH P Sbjct: 134 IDRLLTEAPIAFEPDTAKLTPDGEQAARSVAIALAKAPAGFRYRVTGHVARGP--GGESA 191 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 +LS DRA + ++L +G++ R+ G R +RR++I V Sbjct: 192 ALKLSRDRARAVARILTTNGLTVARV-TYRGLGDTRP----ATGGEEDRRVEITV 241 >gi|323140666|ref|ZP_08075588.1| hypothetical protein HMPREF9443_00346 [Phascolarctobacterium sp. YIT 12067] gi|322414851|gb|EFY05648.1| hypothetical protein HMPREF9443_00346 [Phascolarctobacterium sp. YIT 12067] Length = 244 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 35/168 (20%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK------ 254 + L+ + + +G++ E +T ++ + D+ + ++ E + + + Sbjct: 57 ALLNEIHKELNNRGIMVEINKTHDVLRLHDKALKFLPGRAKPEAGEENVQQISEVLYTVL 116 Query: 255 -----IGEVLAHSTEVISIRGHTDAS--PFRNIARDNWRLSLDRAYSAYQVLMK------ 301 E I I GHTD+ FR+ DNW LS RA ++++ Sbjct: 117 NKDRGDKPKYKELVETIFIEGHTDSDLPSFRSDYPDNWMLSTARAVRTWEMMSAFRPDGA 176 Query: 302 ----------SGVSEDRISKISGFAHHRLKIASDP---MNSANRRIDI 336 +G I SG+A R + ++ S NRRIDI Sbjct: 177 TQTLGEIKNHNGFP---IFSCSGYADTRRIVENETSKEEKSINRRIDI 221 >gi|224371662|ref|YP_002605826.1| hypothetical outer membrane protein [Desulfobacterium autotrophicum HRM2] gi|223694379|gb|ACN17662.1| hypothetical outer membrane protein [Desulfobacterium autotrophicum HRM2] Length = 1306 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 3/103 (2%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSL 289 D+ FD + S + + L + + + I I + +N LS Sbjct: 1036 DKILLSNFDINQSDLTEDHKMALD-LLAKIMDNDLDIRILAFEGRASSTGDDENNITLSH 1094 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332 +RA + L GVS++R+ ++G+ S+ N NR Sbjct: 1095 NRAKTVKDYLSVKGVSDERLGLVNGYGSA--LSLSNTPNQENR 1135 >gi|218510314|ref|ZP_03508192.1| peptidoglycan-associated lipoprotein [Rhizobium etli Brasil 5] gi|327193465|gb|EGE60361.1| peptidoglycan-associated lipoprotein [Rhizobium etli CNPAF512] Length = 177 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 43/143 (30%), Gaps = 7/143 (4%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 LA + + G T ++ + FD SS + L Sbjct: 29 ALASCAKKPPNSAGELGLGGGAGGAATPGSAQDFTVNVGDRIFFDTDSSSIRADASQTLD 88 Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + + LA ++ GH D N L RA +A L GV R+ I Sbjct: 89 RQAQWLARYPNYQITVEGHADER---GTREYNLALGARRAAAAKDYLASRGVPAQRMKTI 145 Query: 313 SGFAHHRLKI--ASDPMNSANRR 333 S + R S NRR Sbjct: 146 S-YGKERPVAVCDDISCWSQNRR 167 >gi|332716442|ref|YP_004443908.1| outer membrane lipoprotein omp16 [Agrobacterium sp. H13-3] gi|325063127|gb|ADY66817.1| outer membrane lipoprotein omp16 [Agrobacterium sp. H13-3] Length = 177 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD S+ + LQ+ + LA + I++ GH D N L R Sbjct: 68 DRIFFDTDSTSIRADAQQTLQRQAQWLARYPKYAITVEGHADER---GTREYNLALGARR 124 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + L GV R+ IS + + S NRR Sbjct: 125 AAATRDFLASQGVPASRMKTIS-YGKEKPVAVCDDISCWSQNRR 167 >gi|254439271|ref|ZP_05052765.1| hypothetical protein OA307_4141 [Octadecabacter antarcticus 307] gi|198254717|gb|EDY79031.1| hypothetical protein OA307_4141 [Octadecabacter antarcticus 307] Length = 514 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 54/154 (35%), Gaps = 11/154 (7%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L+ + + +V + +L + +T F+ S+ ++ + + Sbjct: 362 LSDQGDRLANAIVNAGSEVPLTELQRMMRLLSPRVRMSSTFRFEPGSTRLDGQSRSNVMQ 421 Query: 255 IGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS--GVSEDRI 309 + + + + + G +D +A N LS RA + L ++ G + + Sbjct: 422 LAQAIRDGRFGGRELMLVGFSDGR---GLALANRDLSSARAEAVRLDLTRALGGTFPENV 478 Query: 310 -SKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 + F D + NRR+++ V D Sbjct: 479 EIDTAAFGEALPMACDDTIWGQQTNRRVELWVRD 512 >gi|163758789|ref|ZP_02165876.1| probable peptidoglycan-associated lipoprotein precursor [Hoeflea phototrophica DFL-43] gi|162284079|gb|EDQ34363.1| probable peptidoglycan-associated lipoprotein precursor [Hoeflea phototrophica DFL-43] Length = 167 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 42/114 (36%), Gaps = 8/114 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS+ P+ L + + L ++ GH D N L R Sbjct: 58 DRIFFDTDSSVIRPDAASTLDRQAQWLNQYPTYRITMEGHADER---GTREYNLALGARR 114 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDRQG 343 A +A Q L GV+ +RI IS F R S NRR + V G Sbjct: 115 AAAAKQYLTSRGVAANRIQTIS-FGKERPVAVCDDISCWSQNRR-SVTVLGGAG 166 >gi|23499825|ref|NP_699265.1| putative lipoprotein [Brucella suis 1330] gi|161620148|ref|YP_001594034.1| TraQ protein [Brucella canis ATCC 23365] gi|254702492|ref|ZP_05164320.1| TraQ protein [Brucella suis bv. 3 str. 686] gi|260568602|ref|ZP_05839071.1| outer membrane protein OprF [Brucella suis bv. 4 str. 40] gi|261753065|ref|ZP_05996774.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|81789251|sp|Q9RPX3|YU58_BRUSU RecName: Full=Type IV secretion system putative outer membrane lipoprotein BRA0058; Flags: Precursor gi|5929877|gb|AAD56622.1|AF141604_12 ORF12 [Brucella suis 1330] gi|23463394|gb|AAN33270.1| lipoprotein, putative [Brucella suis 1330] gi|161336959|gb|ABX63263.1| TraQ protein [Brucella canis ATCC 23365] gi|260155267|gb|EEW90348.1| outer membrane protein OprF [Brucella suis bv. 4 str. 40] gi|261742818|gb|EEY30744.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] Length = 172 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 11/119 (9%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 Q + F + ++ P + + ++ +L + I++RG TD + + Sbjct: 61 RPPKQTVSVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPPPGDT---Q 116 Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ RA + Y L+ GVS RI+ + +A + P NRR+DI + + Sbjct: 117 VARVRALAIYNWLINQGVSASRITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 172 >gi|163786938|ref|ZP_02181386.1| hypothetical protein FBALC1_17172 [Flavobacteriales bacterium ALC-1] gi|159878798|gb|EDP72854.1| hypothetical protein FBALC1_17172 [Flavobacteriales bacterium ALC-1] Length = 278 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 9/113 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN----WRL 287 + +F S E+ VL KI +LA T +I GH + A D L Sbjct: 163 DNLLFRTGYSYLTKESKPVLDKIAVILAERTNVYFTIEGHVCCTQGERDAIDRKTKKRNL 222 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 S+ RA Y L+K GV R+ + G + RR++ILV Sbjct: 223 SVARAKYIYDYLVKKGVRPYRMKFV-GMRRKEPLGGEPEFD---RRVEILVTK 271 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 14/126 (11%) Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI 280 + S + ++ FD L + E ISI G D Sbjct: 12 FQLAFSQQELKHEVYFDTDKYNIPETEHSRLLLFLSKVEEMDIEKISIYGFCDDR---GS 68 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRR 333 N LS RA + V + E I+ + G + + + NR+ Sbjct: 69 DNYNLVLSQQRADAIKTVFSNNEFDESVITNVDGKGE---ILLNIVHEENLSKIRGLNRK 125 Query: 334 IDILVE 339 ++I+V+ Sbjct: 126 VEIIVK 131 >gi|254720692|ref|ZP_05182503.1| hypothetical protein Bru83_14530 [Brucella sp. 83/13] gi|265985741|ref|ZP_06098476.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306839356|ref|ZP_07472172.1| lipoprotein [Brucella sp. NF 2653] gi|264664333|gb|EEZ34594.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306405604|gb|EFM61867.1| lipoprotein [Brucella sp. NF 2653] Length = 172 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 11/119 (9%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 Q + F + ++ P + + ++ +L + I++RG TD + + Sbjct: 61 RPPKQTVSVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPPPGDT---Q 116 Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ RA + Y L+ GV +I+ + +A + P NRR+DI + + Sbjct: 117 VARTRALAIYNWLINQGVPASKITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 172 >gi|241206183|ref|YP_002977279.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860073|gb|ACS57740.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 177 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 42/143 (29%), Gaps = 7/143 (4%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 LA + + G T ++ + FD SS + L Sbjct: 29 ALASCAKKPPNSAGDLGLGSGAGGAATPGSAQDFTVNVGDRIFFDTDSSSIRADASQTLD 88 Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + + L ++ GH D N L RA +A L GV R+ I Sbjct: 89 RQAQWLGRYPNYQITVEGHADER---GTREYNLALGARRAAAAKDYLASRGVPAQRLKTI 145 Query: 313 SGFAHHRLKI--ASDPMNSANRR 333 S + R S NRR Sbjct: 146 S-YGKERPVAVCDDISCWSQNRR 167 >gi|160901602|ref|YP_001567183.1| OmpA/MotB domain-containing protein [Petrotoga mobilis SJ95] gi|160359246|gb|ABX30860.1| OmpA/MotB domain protein [Petrotoga mobilis SJ95] Length = 290 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 52/162 (32%), Gaps = 29/162 (17%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV- 258 L + + + E T G +IS+ D F S+ E +L +IG + Sbjct: 82 QELLKIIEDEKYKGKITIEETDKGTIISMRD---IAFFRPGSAELTAEAKDLLYRIGTII 138 Query: 259 LAHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 L H++ I + G TD P ++ NW LS RA S + R+ + A Sbjct: 139 LEHTSNAIEVYGFTDDQPVLPSSVYPSNWHLSAARAASVVNFFTIE-LKNRRL--VEKMA 195 Query: 317 H----------------HRLKIASDPMNSANRRIDILVEDRQ 342 D + +I + + Sbjct: 196 EINSGQFDIDYFYNSDRFFPIGEGDSEIAK----EISLLRSE 233 Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 11/108 (10%), Positives = 28/108 (25%), Gaps = 6/108 (5%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 +K W ++D T+L+ F+ ++ + + Sbjct: 3 RKKR---EKTGDAKWMQTFSDMTTLLLTMFIALFSMATISPGKFQQAVVSLQNVF---EG 56 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQR 126 G+ + I + + K D K ++ + Sbjct: 57 QPIGVLVGGRSISDEPLITSNPGIRQELLKIIEDEKYKGKITIEETDK 104 >gi|308049988|ref|YP_003913554.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] gi|307632178|gb|ADN76480.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799] Length = 285 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 6/71 (8%) Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 +TD N ++ +A + L++SG+SE+RI + R + Sbjct: 218 YTDNHR---SKATNQAITEQQANTLRSYLVQSGISEERIIA-TAHGEQRHIANNRTTRGR 273 Query: 331 --NRRIDILVE 339 NRR+ + VE Sbjct: 274 DLNRRVVVRVE 284 >gi|209550775|ref|YP_002282692.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536531|gb|ACI56466.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 177 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS + L + + LA ++ GH D N L R Sbjct: 68 DRIFFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADER---GTREYNLALGARR 124 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A +A L GV R+ IS + R S NRR Sbjct: 125 AAAAKDYLASRGVPAQRLKTIS-YGKERPVAVCDDISCWSQNRR 167 >gi|29347895|ref|NP_811398.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron VPI-5482] gi|253572488|ref|ZP_04849890.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6] gi|298387855|ref|ZP_06997405.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14] gi|29339797|gb|AAO77592.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron VPI-5482] gi|251837903|gb|EES65992.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6] gi|298259460|gb|EFI02334.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14] Length = 366 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 10/137 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 +V + + E + + + + F +S+ + + + E L + Sbjct: 236 EPVVVEQPKPAPVVEQPQPRKEVVVQPMKQDIFFALNSAKIQDDQKSKINMLVEYLQKNP 295 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLK 321 + + G+ DA+ ++ N LS RA + +VL G++ DRI S + Sbjct: 296 SAKVKVTGYADAN--TGNSKINKTLSEKRAANVAEVLKTKGITPDRIIADS-KGDTVQPY 352 Query: 322 IASDPMNSANRRIDILV 338 + R+ I + Sbjct: 353 KTPEEN-----RVSICI 364 >gi|294341389|emb|CAZ89806.1| putative bacterial outer membrane protein OmpA/MotB [Thiomonas sp. 3As] Length = 172 Score = 59.2 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 41/109 (37%), Gaps = 6/109 (5%) Query: 229 IDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRL 287 D F +S+ + V++ + L + ++G+ D N L Sbjct: 65 PDVPKQVYFAFNSAALKAQYKPVVEVNAQFLQSHPAAHLQLQGNCDPR---GSQEYNLAL 121 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 RA + + + G S +++ IS + + + + +RR+D+ Sbjct: 122 GQSRANAVMKAMTLLGASPNQMEAIS-YGSEK-ASPARADYAHDRRVDL 168 >gi|227823307|ref|YP_002827279.1| putative outer membrane lipoprotein Omp16-like protein precursor [Sinorhizobium fredii NGR234] gi|227342308|gb|ACP26526.1| putative outer membrane lipoprotein Omp16-like protein precursor [Sinorhizobium fredii NGR234] Length = 176 Score = 59.2 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS + L + + LA I+I GH D N L R Sbjct: 67 DRIFFDTDSSSIRADAQATLARQAQWLAKYPNYAITIEGHADER---GTREYNLALGARR 123 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A + + L GV +R+ IS + + S NRR Sbjct: 124 AAATREYLAGQGVPANRMRTIS-YGKEKPVAVCDDISCWSQNRR 166 >gi|227824065|ref|YP_002828038.1| putative outer membrane protein, OmpA/MotB domain protein [Sinorhizobium fredii NGR234] gi|227343067|gb|ACP27285.1| putative outer membrane protein, OmpA/MotB domain protein [Sinorhizobium fredii NGR234] Length = 189 Score = 59.2 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 9/102 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + S+ L K L + + ++G D S + LS RA +A Sbjct: 82 FTQDSATLDAVAKATLDKQATWLNSNQRWLVKLQGFADDSGSASKMAT---LSQQRADAA 138 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334 L+ GV +R+ G+ + R S NRR+ Sbjct: 139 MAYLVSKGVDPNRLWA-KGYGNDREVRDC-TDRSCKVQNRRV 178 >gi|61655687|gb|AAX49330.1| PlpD [Bibersteinia trehalosi] Length = 219 Score = 59.2 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 6/89 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLD 290 +FD + V+ + L S + + I GHTD N LS Sbjct: 116 EGDFLFDFDKDTLTAKGKEVVDNVAAQLKSSGAQQVKIEGHTDRL---GSVAYNLDLSQR 172 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHR 319 RA L + GV+ + ++ + G Sbjct: 173 RANMVKARLQQQGVTAE-MTAV-GLGKAH 199 >gi|329960555|ref|ZP_08298922.1| OmpA family protein [Bacteroides fluxus YIT 12057] gi|328532619|gb|EGF59409.1| OmpA family protein [Bacteroides fluxus YIT 12057] Length = 409 Score = 59.2 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 11/134 (8%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + K K +Q + K + + V + + D N F+ + Sbjct: 250 KSKKAKPEIQYVEKIVEKVVEKPVI------MEKVVQAPAHANVLCDLFNNIYFEFDKAE 303 Query: 244 PLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 ++ V+ +I +LA +T+ I G TDA + + N LS RA + L++ Sbjct: 304 ITEKSDAVIDQIARIMLADTTKRYLITGCTDA---KGSPQYNMGLSRRRADAVVNALLQK 360 Query: 303 GVSEDRISKISGFA 316 GV E+ + K G Sbjct: 361 GVPEE-MLKSRGVG 373 >gi|289165851|ref|YP_003455989.1| lipoprotein [Legionella longbeachae NSW150] gi|288859024|emb|CBJ12952.1| putative lipoprotein [Legionella longbeachae NSW150] Length = 239 Score = 59.2 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S L I +L + + G TD LS +A + Sbjct: 114 FMFESPRLNEICYPGLINIVRLLKFYPLSPVYVAGFTDDV---GTRYHKRSLSQAQAETM 170 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336 L + + ++ K G+ + ++ NRRI+I Sbjct: 171 LTFLWANNIPA-QLLKAEGYGDKNDVGDNKLIHGSAFNRRIEI 212 >gi|270159328|ref|ZP_06187984.1| OmpA family outer membrane protein [Legionella longbeachae D-4968] gi|269987667|gb|EEZ93922.1| OmpA family outer membrane protein [Legionella longbeachae D-4968] Length = 249 Score = 59.2 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 7/103 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S L I +L + + G TD LS +A + Sbjct: 124 FMFESPRLNEICYPGLINIVRLLKFYPLSPVYVAGFTDDV---GTRYHKRSLSQAQAETM 180 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336 L + + ++ K G+ + ++ NRRI+I Sbjct: 181 LTFLWANNIPA-QLLKAEGYGDKNDVGDNKLIHGSAFNRRIEI 222 >gi|86134308|ref|ZP_01052890.1| OmpA family protein [Polaribacter sp. MED152] gi|85821171|gb|EAQ42318.1| OmpA family protein [Polaribacter sp. MED152] Length = 397 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 29/270 (10%), Positives = 78/270 (28%), Gaps = 17/270 (6%) Query: 66 EQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITK----NSVDLKIGSTNQK 121 N + + N + + + G Sbjct: 129 AASLNITEPTDNGGDPMMALNFGITPQFRINNRMSLFLDFSSLIHFYQDDNFDGGPNLSP 188 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 ++ N + ++ + + + E+ + +++ + E +KE Sbjct: 189 RESNISLFNTSLGLSFALGKNKQLADSYFMEEVVVNDELEEIKNRLAAAEKEIEVLKNKE 248 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 ++ + +L ++ N V+ + I + FD + Sbjct: 249 LAATPNQELIMTELDERYVRKDEADKYAN----VVTGSNVDFIRQLLNSGYINVYFDVNK 304 Query: 242 SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + ++ + + + L + + G+ D + N LS +RA + VL+ Sbjct: 305 TRIQDGSLNSVNYLKQFLIDNPTVNAELIGYADET---GSEERNKTLSQNRAKRVFDVLV 361 Query: 301 KSGVSEDRISKISGFAHHRLKIASDPMNSA 330 +G+S R+S G + ++ Sbjct: 362 AAGISPARLSYYGG-GEDKSV----TEDAR 386 >gi|94502195|ref|ZP_01308691.1| OmpA family protein [Oceanobacter sp. RED65] gi|94425675|gb|EAT10687.1| OmpA family protein [Oceanobacter sp. RED65] Length = 143 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 17/109 (15%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS + + L L +S+ G TD N L+ DRA + Sbjct: 43 FDFDSSELTGKARMKLLAKMADLQKQGVSSVSVFGFTDNV---GAEAYNKNLAKDRASTV 99 Query: 296 YQVLMKSGVSEDRISKISGFAHHRL----KIASDPMNSA--NRRIDILV 338 + L GV +I+++ G + + ++ + NRR +I + Sbjct: 100 ARFLANGGV---QINEVVG----KPLCCYLVDNESDQNRHVNRRAEIHL 141 >gi|170702223|ref|ZP_02893126.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] gi|170132858|gb|EDT01283.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10] Length = 233 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 68/223 (30%), Gaps = 25/223 (11%) Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + S++ ++ + L +S N + + + R Sbjct: 14 MLAACSSASGPTFNAYAIDLADGSRAYRVECHGLFESSNACMRAAQRVCGDQPVRPLDRL 73 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI---PLP 246 +RL D A+KI + + ++ T I+ + +F + P Sbjct: 74 QRLSDPAQKIDDPGAMTFQCGVPPQLVVATPAPVAEKPIVLAAD-ALFAFDKADVDAIKP 132 Query: 247 ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 E L +I L+ + + + G+TD N LS RA + L GV Sbjct: 133 EGRAELDEIASKLSAAPSVRHVDVVGYTDRL---GSDEYNAALSQRRAETVKWYLTSQGV 189 Query: 305 SEDRISKISGFAHHRLKIASDPMNSAN-----------RRIDI 336 + +I + + N RR++I Sbjct: 190 TA----QIDARGDGK-VLPGTACEMRNRAELIRCLAPDRRVEI 227 >gi|153809080|ref|ZP_01961748.1| hypothetical protein BACCAC_03388 [Bacteroides caccae ATCC 43185] gi|149128413|gb|EDM19632.1| hypothetical protein BACCAC_03388 [Bacteroides caccae ATCC 43185] Length = 395 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 47/144 (32%), Gaps = 5/144 (3%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-IIDQRNT 234 + + I ++ + + ++ + + + ++I+ T Sbjct: 235 QRPTPQIISEIELNQMRDQMNAMAAANMQLQQQLANAQQPVEVEDTEEVVITDPNIAPRT 294 Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAY 293 F S P+ + L + + I G+ D+ N +LSL RA Sbjct: 295 VFFKIGSDRLSPQEEMNLSYLANRIKEFPGTTYTINGYADS--ATGTPAFNEKLSLKRAQ 352 Query: 294 SAYQVLMKS-GVSEDRISKISGFA 316 +L+K G+ D + +G Sbjct: 353 VVKDLLVKKYGIPADNLKVAAGGG 376 >gi|15919973|ref|NP_361033.1| TraQ protein [Plasmid pSB102] gi|15722272|emb|CAC79164.1| TraQ protein [Plasmid pSB102] Length = 184 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 14/159 (8%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 R + L +++ L + VL + + Q + F +SS P Sbjct: 36 ARTAEVLSLRAELADAQDKLRNQSTQPVVLAAPVKPAL---PASQTVSVYFPFNSSAFRP 92 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 T + + +L + I +RG TD R++L+RA +A L+ GVS Sbjct: 93 -TQTQVATLLPLLGGNVRQIWVRGRTDGDRPSAADE---RVALNRALAAKNWLVAQGVSP 148 Query: 307 DRIS--KISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 +IS +S + + + NRR+DI V +R Sbjct: 149 LKISVNYVSA-GDY--VADNVSAAGRAQNRRVDIEVFNR 184 >gi|260774296|ref|ZP_05883211.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14] gi|260611257|gb|EEX36461.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14] Length = 320 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 11/106 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S + L ++ +V+ + V + G TD++ N ++S RA +A Sbjct: 223 FALGKSTLEDLSYFYLNEVVDVMRTNPALVAHLVGRTDST---GSDAINNKISAQRAQAA 279 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVE 339 Q L G+ RI+ +S A R ++D S + I+++ Sbjct: 280 SQYLQSQGIDAKRIN-VSAVADSRPLTQGSADIERS----VQIILK 320 >gi|116253708|ref|YP_769546.1| OmpA family peptidoglycan-associated lipoprotein precursor [Rhizobium leguminosarum bv. viciae 3841] gi|115258356|emb|CAK09458.1| putative OmpA family peptidoglycan-associated lipoprotein precursor [Rhizobium leguminosarum bv. viciae 3841] Length = 177 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 42/143 (29%), Gaps = 7/143 (4%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 LA + D + T ++ + FD SS + L Sbjct: 29 ALASCAKKNVPNSAGDLGLGAGAGAATPGSAQDFTVNVGDRIFFDTDSSSIRADASQTLD 88 Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + + L ++ GH D N L RA +A L GV R+ I Sbjct: 89 RQAQWLGRYPNYQITVEGHADER---GTREYNLALGARRAAAAKDYLASRGVPAQRLKTI 145 Query: 313 SGFAHHRLKI--ASDPMNSANRR 333 S + R S NRR Sbjct: 146 S-YGKERPVAVCDDISCWSQNRR 167 >gi|312114023|ref|YP_004011619.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] gi|311219152|gb|ADP70520.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 302 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 30/117 (25%), Gaps = 12/117 (10%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDN 284 I + F+ P ++ + + I GHTD N Sbjct: 185 IPVRKVPLPIQFETDRDELTPVGRQYADELAAAINEQRPAVIILEGHTDER---GTDAHN 241 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-------SDPMNSANRRI 334 LS R L + RI + ++ + NRR+ Sbjct: 242 MDLSKRRVERVAAYLKREKGVAARIET-RARGKTEPYVPQNASNLTNEQLWELNRRV 297 >gi|167754048|ref|ZP_02426175.1| hypothetical protein ALIPUT_02336 [Alistipes putredinis DSM 17216] gi|167658673|gb|EDS02803.1| hypothetical protein ALIPUT_02336 [Alistipes putredinis DSM 17216] Length = 431 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 11/109 (10%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLSL 289 + F+ + P+ + L I + + ++ I GH D P N RL+ Sbjct: 330 KGITFFNIGQTELSPKEKLRLDIIATQIKNAPKNKIYVIEGHAD--PQTGSKAVNTRLAE 387 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHR-LKIASDPMNSANRRIDIL 337 RA Y L+ GV + + + G++ + N R+ ++ Sbjct: 388 QRAKKVYDYLISKGVKAENL-QYKGYSDTKSPFKT----EQEN-RVTVI 430 >gi|83717436|ref|YP_439684.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia thailandensis E264] gi|83651261|gb|ABC35325.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia thailandensis E264] Length = 298 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 36/120 (30%), Gaps = 19/120 (15%) Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNW 285 +F S P L +I L + I + G+TD N Sbjct: 176 DYQLLFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTNTYNR 232 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-----NRRIDI 336 +LSL RA + + L G+ + I G + +RR+ I Sbjct: 233 QLSLARAEAIREYLTTRGLPGNLIVA-QGLGKADPVSNGCPDGHSAEAIACLAPDRRVRI 291 >gi|24373749|ref|NP_717792.1| OmpA family protein [Shewanella oneidensis MR-1] gi|24348129|gb|AAN55236.1|AE015661_6 OmpA family protein [Shewanella oneidensis MR-1] Length = 269 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 81/235 (34%), Gaps = 7/235 (2%) Query: 112 DLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEE 171 + + ++ E++ L + T + +S+ E Sbjct: 31 QPLLIEPQTEWTIEQEEDDGEALIGLGGGALLGALVGGPVGAVVGGITGTLIGQSVADTE 90 Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + + ++ +A++R++ K+++S + K + L+S + Sbjct: 91 LVSVTLKNPQQHIAVQRQQVTSLTVKQLASEQRAAEYASTQKHLDALLAEQQQLLSELAL 150 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 F SS + + L + V+ S+E + ++G+ + RDN LS Sbjct: 151 GMNVQFRTGSSELEADFLPQLDNVATVMKRSSESNLELKGYAERR---GDWRDNQSLSEH 207 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQG 343 R L++ GV+ R++ + ++RR+ + + QG Sbjct: 208 RLLEVRDYLIQQGVAPARMTT-QALGAAMSLNEQLDSESDVSDRRVTLTIPPTQG 261 >gi|311294129|gb|ADP88820.1| outer membrane protein [Vibrio parahaemolyticus] gi|311294135|gb|ADP88823.1| outer membrane protein [Vibrio parahaemolyticus] Length = 182 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 16/148 (10%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 +DL+ + + A N + F+ +++ +D + + Sbjct: 49 EDLSIVQDEKIEKVEATNATESCTFDKNSMSLVLH---------YDTNEHHLTNVHKQAI 99 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 K E L + + I + GHTD N LSL RA +A + L K +RI + Sbjct: 100 SKYLE-LVNEDKRILVEGHTDDV---GSQAYNKSLSLRRASTASKYLKKDLGLGNRIVE- 154 Query: 313 SGFAHHRLK--IASDPMNSANRRIDILV 338 F + + ++ NRR+ + + Sbjct: 155 KAFGESAPICKVNENKLSGCNRRVVLTI 182 >gi|167839513|ref|ZP_02466197.1| ompA family protein [Burkholderia thailandensis MSMB43] Length = 276 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 37/116 (31%), Gaps = 19/116 (16%) Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289 +F S P L +I L + I + G+TD N +LSL Sbjct: 158 LFPFDKSALRDLLPAGRAELDRIAAALQQQYQHIRSVRVTGYTDRL---GTDTYNRQLSL 214 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN---------SANRRIDI 336 RA + L G+ D I G + P + +RR+ I Sbjct: 215 ARAETIRAYLTTRGLPGDLIVA-QGLGMADPVSSGCPAGRSAEAIACLAPDRRVRI 269 >gi|83941931|ref|ZP_00954393.1| OmpA domain protein [Sulfitobacter sp. EE-36] gi|83847751|gb|EAP85626.1| OmpA domain protein [Sulfitobacter sp. EE-36] Length = 520 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 19/166 (11%), Positives = 52/166 (31%), Gaps = 14/166 (8%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + + I+ + + + + + S F+ Sbjct: 363 DQTPEEIPVEDQGNRFTNAIAVAGPEITLEELQRMNAALKPMARLSTSFR-------FEA 415 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S ++ +Q++ L S + + N ++L RA + Q + Sbjct: 416 GSVRLDAQSRSNVQQLARALEVGQYDARRLLFVGFSDGQGASFANRDIALRRAEAVRQAV 475 Query: 300 MKSGVSEDRISKIS----GFAHHRLKIASDPMNSA--NRRIDILVE 339 + + V+ + + +++ F D NRR+++ V Sbjct: 476 ITAAVTAN-LERVTLDLDAFGEAMPMACDDTAWGRQANRRVEVWVR 520 >gi|260911457|ref|ZP_05918046.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260634386|gb|EEX52487.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 383 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 54/131 (41%), Gaps = 9/131 (6%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 ++ RL + ++I+ L N + + ++ + ++ + T +F + S+ P Sbjct: 236 KESRLAEKDRQIADLQKALDDCNNQPKTIVKNVKSETVTNL---QPTVLFRQGKSVIDPA 292 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVS 305 L+ I + + + + IRG+ A N +LS RA + L+ K ++ Sbjct: 293 QYAPLELIASYMRNHPDAKVEIRGYASPE---GSAELNQKLSNARAQAVKDALVRKYKIA 349 Query: 306 EDRISKISGFA 316 R++ G Sbjct: 350 ASRLTT-KGMG 359 >gi|213024604|ref|ZP_03339051.1| hypothetical protein Salmonelentericaenterica_19791 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 154 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 4/99 (4%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 L + + + + R MF V+ K +A Sbjct: 59 LANEIARGLLTVDEDDQHSRVVF---RGDAMFVPGQKTVSDAIRPVINKAAREIARVGGA 115 Query: 266 ISIRGHTDASPFRNIAR-DNWRLSLDRAYSAYQVLMKSG 303 +++ GHTD+ P + N LS RA +L G Sbjct: 116 VTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGG 154 >gi|217978517|ref|YP_002362664.1| OmpA/MotB domain protein [Methylocella silvestris BL2] gi|217503893|gb|ACK51302.1| OmpA/MotB domain protein [Methylocella silvestris BL2] Length = 325 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 13/107 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S+ E ++ + +++ + GHTD R N +LS+ RA + Sbjct: 220 FEYRSASLTDEGRQAADELARAIREQQPQIVRLVGHTD---LRGGPEYNMKLSVARAEAV 276 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK----IASDPMN---SANRRID 335 L ++ ++ + G + + + NRR++ Sbjct: 277 AAYLKENNIAVT--VEPEGVGAAEPLQLSDASGLTQDDVYALNRRVE 321 >gi|167578122|ref|ZP_02370996.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia thailandensis TXDOH] Length = 267 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 36/116 (31%), Gaps = 19/116 (16%) Query: 236 MFDKSSSIPL---PETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSL 289 +F S P L +I L + I + G+TD N +LSL Sbjct: 149 LFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRL---GTDTYNRQLSL 205 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI----ASDPMNSA-----NRRIDI 336 RA + + L G+ + I G + +RR+ I Sbjct: 206 ARAEAIREYLTTRGLPGNLIVA-QGLGKADPVSNGCPDGYSAEAIACLAPDRRVRI 260 >gi|218662996|ref|ZP_03518926.1| OmpA family peptidoglycan-associated lipoprotein precursor [Rhizobium etli IE4771] Length = 169 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 42/143 (29%), Gaps = 7/143 (4%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 LA + + G T ++ + FD SS + L Sbjct: 21 ALASCAKKPPNSAGDLGLGAGAGGAATPGSAQDFTVNVGDRIFFDTDSSSIRADASQTLD 80 Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + + L ++ GH D N L RA +A L GV R+ I Sbjct: 81 RQAQWLGRYPNYQITVEGHADER---GTREYNLALGARRAAAAKDYLASRGVPAQRMKTI 137 Query: 313 SGFAHHRLKI--ASDPMNSANRR 333 S + R S NRR Sbjct: 138 S-YGKERPVAVCDDISCWSQNRR 159 >gi|90022215|ref|YP_528042.1| OmpA family protein [Saccharophagus degradans 2-40] gi|89951815|gb|ABD81830.1| OmpA/MotB [Saccharophagus degradans 2-40] Length = 230 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 26/227 (11%), Positives = 64/227 (28%), Gaps = 14/227 (6%) Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 +K + L + + + + + + + Sbjct: 1 MKTKQLISAATFSALLIVSNSAFAGETKTQKQRDNDKAAATLSTMVIGGLVGGPVGAFIG 60 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 L+ E +++ L ++ + L D + + + + Sbjct: 61 AVTGSLAAEHADTKHQQQELTIAMNEVEEMKAQLEKDQQRASAMEQKAAEKLEFQV---- 116 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 +F S + + + L + E +++ GH D N+ LS +R Sbjct: 117 ---LFTTGSDELSQTDLKRVNSVARYLNTNPELKVNLEGHADPR---GTDEYNYVLSEER 170 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDI 336 S + L + G+ R+ S + + +RR+ I Sbjct: 171 VKSVIKALEEKGIDRSRV-TYSAYGSDLSTAYQGDLEAYALDRRVKI 216 >gi|170691012|ref|ZP_02882178.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] gi|170144261|gb|EDT12423.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M] Length = 353 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 26/78 (33%), Gaps = 13/78 (16%) Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 I G+TD N LSL RA + L GV+ I G + Sbjct: 274 RITGYTDRL---GDNAHNQSLSLQRAQTVAAYLRARGVTVP--IAIRGLGSAKPVAQCRQ 328 Query: 327 MN--------SANRRIDI 336 + NRR++I Sbjct: 329 TRRDELVRCLAPNRRVEI 346 >gi|116249010|ref|YP_764851.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115253660|emb|CAK12053.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 184 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 9/111 (8%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 I++ F + S+ + L L+ + + ++G D A Sbjct: 68 ILNVGRRIYFAQDSATLDSVAMATLDNQAAWLSKNPTWLLKLQGFADD---SGSASSMET 124 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334 LS RA +A L GV R+ G+ + R S NRR+ Sbjct: 125 LSQKRADAAMAYLASKGVEARRMWA-KGYGNDREVRDC-TERSCKVQNRRV 173 >gi|85374663|ref|YP_458725.1| putative outer membrane lipoprotein [Erythrobacter litoralis HTCC2594] gi|84787746|gb|ABC63928.1| putative outer membrane lipoprotein [Erythrobacter litoralis HTCC2594] Length = 242 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 71/212 (33%), Gaps = 9/212 (4%) Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + +E + + + L+ + L R+ L Sbjct: 22 AAASQTAAPYVERLAAEAEAIAGNDVTVRFADREGYPSRHAMLTPARELDEGRRADLAKQ 81 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGIL----ISIIDQRNTPMFDKSSSIPLPETIVV 251 I D + E + + I T F++SS+ + Sbjct: 82 IGAIDGIGGVHWTDGTMLAEAGEAPLESLRCQDDVQAILTARTLRFEESSAALAAGGTEL 141 Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 L ++ L +I+I GHTD N LS RA + + L+ GV E+ + Sbjct: 142 LDEVAAALRPCYGAIIAITGHTDT---SGDEPANIVLSRRRAAAVERALVARGVPEESL- 197 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +I+G + DP + ANRRI+ V +Q Sbjct: 198 RINGLGSSQPVQGLDPADPANRRIEFSVVAKQ 229 >gi|298386438|ref|ZP_06995994.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14] gi|298260815|gb|EFI03683.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14] Length = 364 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 7/120 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 +V + + E + + I + F +S+ + + + E L + Sbjct: 234 EPVVTEQPKPAPVVEQPQPKKEVVIEPLKQNIFFALNSAKIQDDQQAKISSLVEYLEKHS 293 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF-AHH-RL 320 +S+ G+ D N LS RA + ++L GV+ DRI + G+ + Sbjct: 294 AAKVSVTGYADKE--TGNPNINMTLSEKRAKNVIEMLKAKGVAADRI--VIGYKGDTVQP 349 >gi|306841163|ref|ZP_07473879.1| lipoprotein [Brucella sp. BO2] gi|306288789|gb|EFM60107.1| lipoprotein [Brucella sp. BO2] Length = 129 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 11/119 (9%) Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 Q + F + ++ P + + ++ +L + I++RG TD + + Sbjct: 18 RPPKQTISVYFPQDVTVFRPTSAQ-INQLHTLLWPVPKHINVRGLTDNNCPTPGDT---Q 73 Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS----KISGFAHHRLKIASDPMNSANRRIDILVEDR 341 ++ RA + Y L+ GV +I+ + +A + P NRR+DI + + Sbjct: 74 VARVRALAIYNWLINQGVPASKITISYAPVKDYASNAPL---SPGRVLNRRVDIEILRK 129 >gi|332829521|gb|EGK02170.1| hypothetical protein HMPREF9455_01804 [Dysgonomonas gadei ATCC BAA-286] Length = 382 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 64/202 (31%), Gaps = 8/202 (3%) Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 + D L S L K K + P + + ++ L Sbjct: 183 DDFNGREQGSHYDGTVNALLGVSFKLSKGGFKIVDAADPAELQRLNNQINDQRALLGNKD 242 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE 257 S L +A+ V+ + T+ + + +F S+ + + Sbjct: 243 SEISRLKTELANKPEPQVIVQETKEIKEQTEVLMNAVVVFRIGSAKLEQNQDINIFNAAR 302 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGF 315 L + + + G+ D S A N RLS RA + +VL+ K ++ RI+ + Sbjct: 303 YLKDNPSVNVVVTGYADKS--TGTAAINQRLSEQRAEAVAKVLIDKYDIAPSRITTKAS- 359 Query: 316 AHHRLKIASDPMNSANRRIDIL 337 +D NR + Sbjct: 360 GDKEQLFPTD---QWNRVVVFT 378 >gi|313141840|ref|ZP_07804033.1| OmpA/MotB [Helicobacter canadensis MIT 98-5491] gi|313130871|gb|EFR48488.1| OmpA/MotB [Helicobacter canadensis MIT 98-5491] Length = 263 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 66/170 (38%), Gaps = 13/170 (7%) Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 + + + +K + + + + +L V ++ K + + D Sbjct: 62 QQADITTDPETAEQIIKVQSEILEFKEDARVSLGPSVVEDDGKEGFILRFHGRL---LFD 118 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI--ARDNWRLS 288 + T + + + L ++LQK+ + + + I G+ D + +D+ LS Sbjct: 119 EEKTAIENADEILFLKRLALILQKMPQTM-----HLDIIGYADNVEGKPNLKYQDSLGLS 173 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336 RA + ++L+++ V+ +I+ + G + + NRR++ Sbjct: 174 ALRASNVAKILIENQVNPQKITSLGG-GATNFLLPNTNAENRAQNRRVEF 222 >gi|300310619|ref|YP_003774711.1| OmpA protein [Herbaspirillum seropedicae SmR1] gi|300073404|gb|ADJ62803.1| OmpA protein [Herbaspirillum seropedicae SmR1] Length = 190 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 7/107 (6%) Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 +F+ + P + L+K + + GH D +N LSL RA Sbjct: 88 LFELGTDRLTPASQDALKKAIAEIKDFPAGEFVLTGHADNI---GSETNNDALSLRRARL 144 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVE 339 + L ++ V I ++ G ++ NR ++I + Sbjct: 145 IERELRRADVKALSI-EVIGKGARDPRVPQKRGVAEPRNRFVEIKIR 190 >gi|83855407|ref|ZP_00948937.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1] gi|83843250|gb|EAP82417.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1] Length = 520 Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 19/166 (11%), Positives = 52/166 (31%), Gaps = 14/166 (8%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + + I+ + + + + + S F+ Sbjct: 363 DQTPEEIPVEDQGNRFTNAIAVAGPEITLEELQRMNAALKPMARLSTSFR-------FEA 415 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S ++ +Q++ L S + + N ++L RA + Q + Sbjct: 416 GSVRLDAQSRSNVQQLARALEVGQYDARRLLFVGFSDGQGASFANRDIALRRAEAVRQAV 475 Query: 300 MKSGVSEDRISKIS----GFAHHRLKIASDPMNSA--NRRIDILVE 339 + + V+ + + +++ F D NRR+++ V Sbjct: 476 ITAAVTAN-LERVTLDLDAFGEAMPMACDDTAWGRQANRRVEVWVR 520 >gi|311294121|gb|ADP88816.1| outer membrane protein [Vibrio parahaemolyticus] Length = 182 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 L + + I + GHTD N LSL RA +A + L K +RI + F Sbjct: 105 LVNEDKRILVEGHTDDV---GSQAYNKSLSLRRASTASKYLKKDLGLGNRIVE-KAFGES 160 Query: 319 RLK--IASDPMNSANRRIDILV 338 + + ++ NRR+ + + Sbjct: 161 APICKVNENKLSGCNRRVVLTI 182 >gi|311294119|gb|ADP88815.1| outer membrane protein [Vibrio parahaemolyticus] gi|311294123|gb|ADP88817.1| outer membrane protein [Vibrio parahaemolyticus] gi|311294125|gb|ADP88818.1| outer membrane protein [Vibrio parahaemolyticus] gi|311294127|gb|ADP88819.1| outer membrane protein [Vibrio parahaemolyticus] gi|311294131|gb|ADP88821.1| outer membrane protein [Vibrio parahaemolyticus] gi|311294133|gb|ADP88822.1| outer membrane protein [Vibrio parahaemolyticus] Length = 182 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 L + + I + GHTD N LSL RA +A + L K +RI + F Sbjct: 105 LVNEDKRILVEGHTDDV---GSQAYNKSLSLRRASTASKYLKKDLGLGNRIVE-KAFGES 160 Query: 319 RLK--IASDPMNSANRRIDILV 338 + + ++ NRR+ + + Sbjct: 161 APICKVNENKLSGCNRRVVLTI 182 >gi|313676967|ref|YP_004054963.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312943665|gb|ADR22855.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 618 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 N F+ S ++ + K+ ++L+ + I I G+TD A N LS R Sbjct: 519 NNIYFEFDSYELSEKSSNEINKVADLLSQNPNLKIEIGGYTDEI---GSASYNKELSRKR 575 Query: 292 AYSAYQVL-MKSGVSEDRISKISGFA 316 A + Y+ L +K GV E+ I + G+ Sbjct: 576 AKAVYEKLIIKDGVLEENIKAV-GYG 600 >gi|213865487|ref|ZP_03387606.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 233 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 6/75 (8%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 162 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 218 Query: 289 LDRAYSAYQVLMKSG 303 RA S L+ G Sbjct: 219 EKRAQSVVDYLISKG 233 >gi|332707017|ref|ZP_08427077.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L] gi|332354282|gb|EGJ33762.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L] Length = 802 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 76/232 (32%), Gaps = 6/232 (2%) Query: 103 DEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTD 162 ++ + +K K Q + N + + +L + + Sbjct: 563 APEVSDYGLTVKANRQRLKLAGQLPNQALRSNVEQIAKAAAPNLALDNQIEVIELPYTDE 622 Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 L ++ + L + I+A + R+ + + + ++ Sbjct: 623 LTQAQVQRVRNTLNQMDGVVIVASYTEGRVTVKGAILYAKDFPKIIQAFESIPGVKSVEN 682 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETI-VVLQKIGEVLAHSTE-VISIRGHTDASPFRNI 280 + + +D + FD S+ PE I ++ I E + + + I G+ D Sbjct: 683 NLQLHGLDVTSRIYFDLGSAQLKPEDIGTKIRSIKEFMERYPQKHLRIIGYADPR---GQ 739 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332 +N L+ RA VL++ G+ R+ ++ G + + NR Sbjct: 740 LTENQGLAQQRAQMVKDVLVQQGIDPKRL-QVRGVGKRPPDVDASQPLWLNR 790 >gi|218462392|ref|ZP_03502483.1| OmpA family peptidoglycan-associated lipoprotein precursor [Rhizobium etli Kim 5] Length = 177 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 42/143 (29%), Gaps = 7/143 (4%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 LA + + G T ++ + FD SS + L Sbjct: 29 ALASCAKKPPNSAGDLGLGAGAGGAATPGSAQDFTVNVGDRIFFDTDSSSIRADASQTLD 88 Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 + + L ++ GH D N L RA +A L GV R+ I Sbjct: 89 RQAQWLGRYPNYQITVEGHADER---GTREYNLALGARRAAAAKDYLASRGVPAQRMKTI 145 Query: 313 SGFAHHRLKI--ASDPMNSANRR 333 S + R S NRR Sbjct: 146 S-YGKERPVAVCDDISCWSQNRR 167 >gi|85709689|ref|ZP_01040754.1| Photosystem I P700 chlorophyll A apoprotein A2 [Erythrobacter sp. NAP1] gi|85688399|gb|EAQ28403.1| Photosystem I P700 chlorophyll A apoprotein A2 [Erythrobacter sp. NAP1] Length = 198 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 13/111 (11%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRG-HTDASPFRNIARDNWRLSLDRAYSA 295 F + + + L++I + + G H+D+ N R + R + Sbjct: 76 FPDGGAELDDDALAALEQIANSEQIALGGPIVLGAHSDSD---GSDSANERAAEARGLAV 132 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLK--------IASDPMNSANRRIDILV 338 L++ GV EDRI I F ++ + NRR+++LV Sbjct: 133 AGWLIERGVDEDRIDVIV-FGEQNPAEPNALPDGSPNEEGRALNRRVEVLV 182 >gi|332883362|gb|EGK03645.1| hypothetical protein HMPREF9456_01712 [Dysgonomonas mossii DSM 22836] Length = 410 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 18/170 (10%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL---ISIIDQRNT 234 + ++ +L +I S + + + + ++ I +Q Sbjct: 245 DEADPAAIRSMNDKINELRGQIGS--KDSEISRLKQELAVKPEPQIVIEKTKEIKEQTEV 302 Query: 235 PM-----FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 M F S+ + + L + + + + G+ D S A N RLS Sbjct: 303 LMNAVVVFHIGSAKLEKNQDINIYNAARYLKDNPQVNVIVTGYADKS--TGTAAINQRLS 360 Query: 289 LDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 RA + VL+ + G+S RI+ + +D NR + Sbjct: 361 EQRAEAVANVLVEEYGISRSRITTKAS-GDREQLFPTD---QWNRVVVFT 406 >gi|294787634|ref|ZP_06752878.1| cytochrome c oxidase, Cbb3-type, subunit III [Simonsiella muelleri ATCC 29453] gi|294483927|gb|EFG31610.1| cytochrome c oxidase, Cbb3-type, subunit III [Simonsiella muelleri ATCC 29453] Length = 478 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 34/300 (11%), Positives = 84/300 (28%), Gaps = 27/300 (9%) Query: 52 WIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER-----SSQNKIDLSIDEHI 106 W + ++ K + Y K + ++ + + +++ ++ Sbjct: 195 WGVALGGEERVKDVANYVMSLSKMQHNEERAARGQEIFKANCVVCHGDKGQGNMATAPNL 254 Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 T N + + ++ + LT + + Sbjct: 255 TDNIWLWGGTEKAIIETITGGRHGQMPAWKGFLTDDKIHLLTAYVWGKSHPDYKGYPQDT 314 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + +P + K A + S V + Sbjct: 315 KDYV--GGIPTAEEPKKAAEPAASAPVVAVSAPAVAASEPTPVVAASEVQAAPAADKAEV 372 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWR 286 + + F S ++ + A + + + I G TD++ A N + Sbjct: 373 RVENGVVKFYFAVGKSAIAANAEKATGEVVKA-AKAGKKLVISGFTDST---GNAVANEK 428 Query: 287 LSLDRAYSAYQVLMKSGVSEDRIS------KISGFAHHRLKIASDPMNSANRRIDILVED 340 LS +RA + L+K GV +D + + ++ RR+++ ++D Sbjct: 429 LSKNRAQAVQAYLIKQGVKKDSMVLRKPESSVGAKG-------NNAEG---RRVEVKIQD 478 >gi|218516473|ref|ZP_03513313.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli 8C-3] Length = 170 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS + L + + LA ++ GH D N L R Sbjct: 61 DRIFFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADER---GTREYNLALGARR 117 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A +A L GV R+ IS + R S NRR Sbjct: 118 AAAAKDYLASRGVPAQRMKTIS-YGKERPVAVCDDISCWSQNRR 160 >gi|332877635|ref|ZP_08445378.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684384|gb|EGJ57238.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 364 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 87/277 (31%), Gaps = 25/277 (9%) Query: 78 TASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNS 137 G +S I + + + + T + + + Sbjct: 92 PTVVGTTSSTITSRTASNTAIARTASNTTIARTANPAVVRTATNTAITQRSVVPAAVVQT 151 Query: 138 QQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAK 197 Q + L + S + L K L + + S A + Sbjct: 152 QTTAAIAQQLAQLSGTVEQLRKQQQLLLATLVANTGMVAAKSNTAPTAANAQATAVGTQA 211 Query: 198 KISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---------------FDKSSS 242 +++T + V+ T TG+ I I ++ + + F + + Sbjct: 212 TVATTTATTATSGYAPIVVQSVTATGVPIQISAEKRSELEQLLAAYGHKKALLYFANNKT 271 Query: 243 IPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 IPL ++ ++ +L E I + G+ A A N LS++RA + Q+L Sbjct: 272 IPLAYDPTIIDEMVTMLQAHPELSILLEGYASAV---GSAAYNNVLSMERAVAVAQILNA 328 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 G+S +RI + A RR+++ V Sbjct: 329 KGISNERILTA-----FKGIDPQATPAQA-RRVELRV 359 >gi|307332443|ref|ZP_07611507.1| OmpA/MotB domain protein [Streptomyces violaceusniger Tu 4113] gi|306881912|gb|EFN13034.1| OmpA/MotB domain protein [Streptomyces violaceusniger Tu 4113] Length = 211 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 7/108 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + +F K S+ E +++I + + + + G TD LS Sbjct: 102 QAEVLFGKDSAKLGGEAKARIKEIASEAERQNAKSVRVFGFTDDLGSAGHG---IVLSKQ 158 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRIDI 336 RA + Q L + + +I G+ + NRR+++ Sbjct: 159 RANAVQQALAED-LEPSVNYEIRGYGEQYPIADNASEEGRKRNRRVEV 205 >gi|113477202|ref|YP_723263.1| OmpA/MotB [Trichodesmium erythraeum IMS101] gi|110168250|gb|ABG52790.1| OmpA/MotB [Trichodesmium erythraeum IMS101] Length = 302 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 31/302 (10%), Positives = 77/302 (25%), Gaps = 29/302 (9%) Query: 41 MTVLMAFFLV-MWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKID 99 +T+ M ++ W + + I+ + S+ ++ + K Sbjct: 22 LTLFMGLMIICAWAFARPNAFKRPDIDVQLTENIDSENVNSQTEENQVTETLETETTKTT 81 Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 + + I ++ ++ + + + + Sbjct: 82 TIETKDAETTTTAKIIYKPSKVNIETTTSTKNPATDRTETTTSAQQPTANTNRIETRTSR 141 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 T+ + E + + D+ S L + + Sbjct: 142 DTEQPTTDKIETTTNTIESTAASQAKPETVSGQTDIVATSDSQEKYLTEAKTLGQIK--- 198 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASP 276 F+ + + + + + GHT Sbjct: 199 -----------------FEINEVELSSPAKQTVNSLIPEINKYDPNRVTIKVEGHTSRV- 240 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 A+ N +S DRA L + + IS G + + S+P + N+R I Sbjct: 241 --GDAQLNKEISQDRANVVVAYLKEKNLPHQVIS--EGMGYSQPLPNSNPASDINQRTVI 296 Query: 337 LV 338 ++ Sbjct: 297 IL 298 >gi|228473928|ref|ZP_04058669.1| putative outer membrane protein [Capnocytophaga gingivalis ATCC 33624] gi|228274442|gb|EEK13283.1| putative outer membrane protein [Capnocytophaga gingivalis ATCC 33624] Length = 388 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 12/163 (7%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 LSK+++ + + + + DN+V T +L +++ F Sbjct: 233 LSKKQMDHNNVQDQKESSIAVQNVKTPEHKGDNLVISEERRRTLEDLLAKYGNKKTPIYF 292 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 ++ +PLP + +I +L + E I + G+ A N +LS+ R+ S Sbjct: 293 ANNAYVPLPHDTEAMDQIVAMLRDNPELSILLEGYASNV---GTAEYNNQLSMKRSESVA 349 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIAS-DPMNSANRRIDILV 338 ++L K G+S RI R S D + RR+DI V Sbjct: 350 RLLQKQGISLQRILTA-----FRGIDDSVDKEKA--RRVDISV 385 >gi|323135988|ref|ZP_08071071.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242] gi|322399079|gb|EFY01598.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242] Length = 341 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 69/234 (29%), Gaps = 19/234 (8%) Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 + + + L + ++ + Q+ + + + + Sbjct: 115 AQPAYQAELQRRVTALAAAANVDASGVGVSGRDVTAPAAIAQNPALMSQIASAPGVRRVI 174 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 + + + + P + R + I + L D Sbjct: 175 AAAAPIATAAIQPATPSTPTTQEPPAEPSPRTAESPGDPRAILAALPSGALDAAECQRAL 234 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 + + F + S+ + L K ++ + I +RGH D Sbjct: 235 DAVAVVDRVE---------FREGSAAITRQAAEALDKAVALIRRCPDVTIEVRGHADD-- 283 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA 330 DN LS+ RA + + L + G+ R+ ++G HR + A +++ Sbjct: 284 ------DNEALSVRRAQAVARYLRREGLGGRRVV-VAGHGAHRARTAKAELDAR 330 >gi|229588858|ref|YP_002870977.1| hypothetical protein PFLU1327 [Pseudomonas fluorescens SBW25] gi|229360724|emb|CAY47582.1| putative outer membrane protein [Pseudomonas fluorescens SBW25] Length = 381 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 + GH DA+ A + L+ +RA S + SG+ +DR+ + G + A+D Sbjct: 229 VLGHVDAT---GTAPASQALTKERAQSIASIFSLSGLKQDRLM-LRGMGDLMPRAANDSN 284 Query: 327 -MNSANRRIDILVEDR 341 + NRR++I+ R Sbjct: 285 QGRALNRRMEIMFTQR 300 >gi|332185559|ref|ZP_08387307.1| hypothetical protein SUS17_607 [Sphingomonas sp. S17] gi|332014537|gb|EGI56594.1| hypothetical protein SUS17_607 [Sphingomonas sp. S17] Length = 78 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 8/75 (10%) Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + G TD R N LS RA + + + + I+ F R K+ Sbjct: 1 MVAGFTDT---SGTPRYNMGLSQRRADAVKAYMTSRSIPDGSITT-EAFGEQRDKLRVQT 56 Query: 327 MNS----ANRRIDIL 337 + NRR++I Sbjct: 57 ADGVREVQNRRVEIT 71 >gi|61655673|gb|AAX49323.1| PlpD [Mannheimia haemolytica] gi|61655675|gb|AAX49324.1| PlpD [Mannheimia haemolytica] Length = 217 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + + V+ + + L S + + + G+TD A N LS R Sbjct: 117 GDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRL---GSAAYNLDLSQRR 173 Query: 292 AYSAYQVLMKSGVSEDRISKISGFA 316 + + L++ GV+ +I + G+ Sbjct: 174 SNTVKARLVQQGVTA-QIEAV-GYG 196 >gi|61655677|gb|AAX49325.1| PlpD [Mannheimia haemolytica] Length = 217 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + + V+ + + L S + + + G+TD A N LS R Sbjct: 117 GDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRL---GSAAYNLDLSQRR 173 Query: 292 AYSAYQVLMKSGVSEDRISKISGFA 316 + + L++ GV+ +I + G+ Sbjct: 174 SNTVKARLVQQGVTA-QIEAV-GYG 196 >gi|61655683|gb|AAX49328.1| PlpD [Mannheimia haemolytica] Length = 217 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + + V+ + + L S + + + G+TD A N LS R Sbjct: 117 GDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRL---GSAAYNLDLSQRR 173 Query: 292 AYSAYQVLMKSGVSEDRISKISGFA 316 + + L++ GV+ +I + G+ Sbjct: 174 SNTVKARLVQQGVTA-QIEAV-GYG 196 >gi|61655681|gb|AAX49327.1| PlpD [Mannheimia haemolytica] gi|61655685|gb|AAX49329.1| PlpD [Mannheimia glucosida] Length = 217 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 +FD + + V+ + + L S + + + G+TD A N LS R Sbjct: 117 GDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRL---GSAAYNLDLSQRR 173 Query: 292 AYSAYQVLMKSGVSEDRISKISGFA 316 + + L++ GV+ +I + G+ Sbjct: 174 SNTVKARLVQQGVTA-QIEAV-GYG 196 >gi|322514054|ref|ZP_08067125.1| lipoprotein PlpD [Actinobacillus ureae ATCC 25976] gi|322120071|gb|EFX92042.1| lipoprotein PlpD [Actinobacillus ureae ATCC 25976] Length = 106 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 18/89 (20%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + G+TD + N LS RA L++ GV +I+ + G+ A D Sbjct: 1 MAGYTDRL---GSEKYNLDLSQRRANMVKSRLVQQGVI-VQINAV-GYGKASQVKACDGE 55 Query: 328 NSA--------NRRIDI-----LVEDRQG 343 + NRR++I +++ +G Sbjct: 56 SGQALRDCLRPNRRVEISANGGVLKQNEG 84 >gi|224437881|ref|ZP_03658828.1| hypothetical protein HcinC1_07905 [Helicobacter cinaedi CCUG 18818] gi|313144330|ref|ZP_07806523.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129361|gb|EFR46978.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 238 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 54/195 (27%), Gaps = 24/195 (12%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 I ++ L +++ + + + + L + K + Sbjct: 30 ITQKTQEDLKIQNQKLLELNEAMSEIAQNYSNLQQELYEALLKEFEKDLKKWDAHIDEDN 89 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV---------LAHSTEVISIRGHTDASPF 277 +I +FD + +L S E I I GHT S F Sbjct: 90 TIRFNEPEVLFDTGAKQVKKRFQDILDDFFPRYVKILSLPKFQDSIEEIRIEGHTSQSWF 149 Query: 278 RN-----IARDNWRLSLDRAYSAYQVLMK-SGVSED-----RISKISGFAHHRLKIASDP 326 N LS RA + + ++ + +G + + D Sbjct: 150 SAQTLEERYLGNAELSQARALEVLKYCFNLKKIDSHKEWLIKVFRANGLSFAKPLEDDD- 208 Query: 327 MNSANRRIDILVEDR 341 +RR++ V + Sbjct: 209 ---KSRRVEFRVITK 220 >gi|190893274|ref|YP_001979816.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli CIAT 652] gi|190698553|gb|ACE92638.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli CIAT 652] Length = 178 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + FD SS + L + + LA ++ GH D N L R Sbjct: 69 DRIFFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADER---GTREYNLALGARR 125 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRR 333 A +A L GV R+ IS + R S NRR Sbjct: 126 AAAAKDYLASRGVPAQRMKTIS-YGKERPVAVCDDISCWSQNRR 168 >gi|71909306|ref|YP_286893.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71848927|gb|AAZ48423.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 188 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + + FD +S+ + L+ LA + + G+ D + N RL L Sbjct: 79 QRSVYFDLNSADIKADYDPALRAHARYLAEHPNARVRVEGNADER---GSSEHNRRLGLK 135 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVED 340 RA + ++ +G +E +I I R + S NRR D++ E Sbjct: 136 RAENVRSAMLSNGAAEKQI-AIKTLGEARPKLVGHDEASWSENRRADVIYER 186 >gi|83593747|ref|YP_427499.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170] gi|83576661|gb|ABC23212.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170] Length = 347 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 78/290 (26%), Gaps = 14/290 (4%) Query: 58 DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGS 117 D ++ + + A +G + + T+ L +G Sbjct: 64 TLDELNSVTEGLVADREASRHARQGTRRAPQEIDAPVSETPVSTPPREATEVGTMLGVGP 123 Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 L + + S + Sbjct: 124 AAPSTAAAAPTPVSQPLPAPAGASGQTITRVAPGTVANAPAGSPGPAAVAARPSAAPTSV 183 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 L + AM + + +++ + L + F Sbjct: 184 LPASEAPAMPAVPGSGTVVIDSAGVHQE---NSLQGSAVRRLDEAAALAGGGAKVGVVYF 240 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARD----NWRLSLDRAY 293 SSS + V+ +I + + V+ + GH+ + N R+S +RA Sbjct: 241 ASSSSDLDNNDLRVIAEIADYQRENGGVLRVIGHSSSRTGDMDPVSHKILNLRVSAERAD 300 Query: 294 SAYQVLMKSGVSEDRISKISGFA----HHRLKIASDPMNSANRRIDILVE 339 + Q LM +GV I + A +R + + NRR +I +E Sbjct: 301 AVAQALMSAGVFPANIV-VGAVADDQKEYREVMP--SGEAFNRRAEIFLE 347 >gi|260550726|ref|ZP_05824934.1| small protein A [Acinetobacter sp. RUH2624] gi|260406232|gb|EEW99716.1| small protein A [Acinetobacter sp. RUH2624] Length = 260 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 7/86 (8%) Query: 228 IIDQRNTPMFDKSSSIPLP--ETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARD 283 + + + +F S + + + + + + S I + G D Sbjct: 142 VNGRTASVLFAFDRSDASAIQQGLNNIDNVVDQIKQSPSTAPIIVSGFADPL---GKFSY 198 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRI 309 N LS RA + ++L+K GV +RI Sbjct: 199 NQELSSKRANTVAKLLVKQGVDPNRI 224 >gi|254417815|ref|ZP_05031539.1| OmpA family protein [Brevundimonas sp. BAL3] gi|196183992|gb|EDX78968.1| OmpA family protein [Brevundimonas sp. BAL3] Length = 384 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 7/109 (6%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSL 289 ++ FD S E V+ + + I G+TD A N LS Sbjct: 276 RQFVVYFDWDRSDLTTEARSVVSQAATYAKSGRPTRVLIVGYTDT---SGSAAYNLGLSN 332 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDI 336 R+ + L+ GV+ + + L + NRR I Sbjct: 333 RRSRTVADALVAQGVNGG-VIALDAKGETALAKPTADGVREPLNRRATI 380 >gi|163789576|ref|ZP_02184014.1| Flagellar motor protein [Carnobacterium sp. AT7] gi|159875108|gb|EDP69174.1| Flagellar motor protein [Carnobacterium sp. AT7] Length = 61 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 ++G+ R+ + G+ +R K + NRR+DIL+ + + Sbjct: 9 QRTGIDPKRV-SVVGYGEYRPKADNKTKEGRLENRRVDILILNSE 52 >gi|88859106|ref|ZP_01133747.1| putative assembly or transport protein for curli synthesis [Pseudoalteromonas tunicata D2] gi|88819332|gb|EAR29146.1| putative assembly or transport protein for curli synthesis [Pseudoalteromonas tunicata D2] Length = 417 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 10/112 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F S+ P L I ++ + I ++G D + ++N LSL R++S Sbjct: 311 FRTGSAQLEPVYSEQLNSIVSLVKSTDYLAIELQGFADQR---GLEQENRSLSLARSHSV 367 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL--VEDRQG 343 Q L G+ + RI ++G + +RR+ I+ ++ R G Sbjct: 368 AQYLNNQGIVQQRI-SVAGLGDEQAVYQVTDPEGLFFDRRV-IVKLIDTRSG 417 >gi|288927834|ref|ZP_06421681.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str. F0108] gi|288330668|gb|EFC69252.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str. F0108] Length = 383 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 59/156 (37%), Gaps = 9/156 (5%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + E + ++ + + RL + ++IS L N + + ++ Sbjct: 211 AQVRDQAEIDGLNAQINSLRGDLSNKDSRLAEKDRQISDLQKALDDCNNQPKTIVKNVKS 270 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281 + ++ + T +F + ++ P L+ I + + E + IRG+ A Sbjct: 271 ETVTNL---QPTVLFRQGKAVIDPAQYAPLELIASYMRNHPEAKVEIRGYASPE---GSA 324 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316 N +LS RA + L+K ++ R++ G Sbjct: 325 ELNQKLSNARAQAVKDALVKRYKIAASRLTT-KGMG 359 >gi|189423681|ref|YP_001950858.1| serine/threonine protein kinase [Geobacter lovleyi SZ] gi|189419940|gb|ACD94338.1| serine/threonine protein kinase [Geobacter lovleyi SZ] Length = 734 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 8/73 (10%) Query: 271 HTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MN 328 TDA + + LS R Q L G+ ++ GF + Sbjct: 668 FTDA---SSDPHSSLALSHQRVGQVAQELRSRGIM---VAAAEGFGSSLPVADNSTKEGR 721 Query: 329 SANRRIDILVEDR 341 N R++I + R Sbjct: 722 QRNNRVEIWLAKR 734 >gi|303229266|ref|ZP_07316061.1| conserved domain protein [Veillonella atypica ACS-134-V-Col7a] gi|302516039|gb|EFL57986.1| conserved domain protein [Veillonella atypica ACS-134-V-Col7a] Length = 55 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVED 340 S R Q L+ +GV +R+ I+ + + N + NRR+D+ + Sbjct: 2 SERRVQDVAQYLVNNGVDANRLIGIA-NGDAKPVATNATANGKAENRRVDVFIHR 55 >gi|91225058|ref|ZP_01260280.1| flagellar motor protein [Vibrio alginolyticus 12G01] gi|91190001|gb|EAS76272.1| flagellar motor protein [Vibrio alginolyticus 12G01] Length = 38 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 17/33 (51%) Query: 21 VAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWI 53 D P L W +AD M++LM FF+++ Sbjct: 6 NKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLS 38 >gi|237739553|ref|ZP_04570034.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229423161|gb|EEO38208.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 232 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 57/169 (33%), Gaps = 24/169 (14%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 K+++ ++ + +S + D +G+ + I I D+ +F+ + Sbjct: 49 RKKEEIIEGFTGLKKNIISKIQKDFEERGIKVDIDPQTGTIKIDDK---ILFNTGEYLLK 105 Query: 246 PETIVVLQKI----------GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 PE L E + I I GHTD N LS RA+ Sbjct: 106 PEGKKYLNDFVPIYINLLLNDEEVKKELSQIIIEGHTDDV---GSYIYNMELSQKRAFEV 162 Query: 296 YQVLMK-----SGVSE-DRISKISGFAHHRLKIAS--DPMNSANRRIDI 336 + + G E +G ++ ++ + + +RR++ Sbjct: 163 IKYIYDEMPNFKGKEELKSYITANGRSNIKVLRDNSGNIDRDKSRRVEF 211 >gi|71907931|ref|YP_285518.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71847552|gb|AAZ47048.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 225 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 10/105 (9%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F S++ P L ++ L + I+I G TD + N L+L RA + Sbjct: 118 FGLGSAMLSPAARSSLNEVMSALLSAR-QITIIGRTDNT---GPLAFNESLALARALAVR 173 Query: 297 QVLMKS--GVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 L+ + ++ + A+D + NRR++++ Sbjct: 174 DHLLSTHPMLTPT--LSVKARGTCCFIAANDTLAGRTQNRRVELV 216 >gi|307568444|pdb|3OON|A Chain A, The Structure Of An Outer Membrance Protein From Borrelia Burgdorferi B31 Length = 123 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 7/107 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +S L + + I ++L I I GHT+ + RA + Sbjct: 21 FYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEXHELS---EKRARAI 77 Query: 296 YQVLMKSGV-SEDRISKISGFAHHRLKIA-SDPMNSANRRIDILVED 340 L+K V +D+I G+ + K S P+ + NRR++I + + Sbjct: 78 GNYLIKXKVKDKDQIL-FKGWGSQKPKYPKSSPLKAKNRRVEITILN 123 >gi|312959447|ref|ZP_07773964.1| OmpA/MotB [Pseudomonas fluorescens WH6] gi|311286164|gb|EFQ64728.1| OmpA/MotB [Pseudomonas fluorescens WH6] Length = 381 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP- 326 + GH DA+ A + L+ +RA S + SG+ +DR+ + G + A+D Sbjct: 224 VLGHVDAT---GTAPASQALTKERAQSIASIFSLSGLKQDRLM-LRGMGDLMPRAANDSN 279 Query: 327 -MNSANRRIDILVEDR 341 + NRR++I+ R Sbjct: 280 QGRALNRRMEIMFTQR 295 >gi|313674265|ref|YP_004052261.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126] gi|312940963|gb|ADR20153.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126] Length = 571 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 50/170 (29%), Gaps = 11/170 (6%) Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 T D E + + E +K +D K+ + + Sbjct: 388 TVDDEVYFHPTADGERGYLASVREEGLGFTDIYMVTHVGNLEKTAKDRISKLKERDNDFI 447 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266 D + + + + + F+ +SS L ++ L + Sbjct: 448 TD---EQLEVKRLIDSV---LNISAYQVYFEVNSSEIDESHDQKLIEMANFLKSHQNLGV 501 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 I + + N+ LS RA S + ++G+ DR+ GF Sbjct: 502 QISAFASSD---GNPKYNYELSNRRAQSVLKFFKENGIESDRL-AARGFG 547 >gi|218674466|ref|ZP_03524135.1| probable outer membrane lipoprotein [Rhizobium etli GR56] Length = 178 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 9/111 (8%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 I++ F + S+ + L L + + ++G D S + Sbjct: 62 ILNVGRRIYFKQDSATLDSVAMATLDNQAAWLNRNPTWLLKLQGFADDSGSASQMET--- 118 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334 LS RA +A L GV R+ G+ + R S NRR+ Sbjct: 119 LSQKRADAAMAYLASKGVDPKRMWA-KGYGNDREVRDC-TDRSCKVQNRRV 167 >gi|302036309|ref|YP_003796631.1| hypothetical protein NIDE0942 [Candidatus Nitrospira defluvii] gi|300604373|emb|CBK40705.1| exported protein of unknown function, OmpA family [Candidatus Nitrospira defluvii] Length = 273 Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 48/162 (29%), Gaps = 8/162 (4%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + E + + L S A + I D + + Sbjct: 49 SQADEAAHSNPSAEALNSSQVSQVLKDSTDHAPVSASIPTTHVDTAPLAIRSTDILHDDI 108 Query: 237 -FDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F+ + LQ+ E L I ++G+TD N L + RA + Sbjct: 109 HFEIGRKGLTDDGKAALQRHAEFLKSERDWGILLQGYTDQQ---GSRSFNKILGMKRAET 165 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRI 334 Q LM GV E I +S SD NRR+ Sbjct: 166 VKQHLMALGVPESSIRTVS-LGEEGALCIDNSDVCRRMNRRV 206 >gi|124266869|ref|YP_001020873.1| hypothetical protein Mpe_A1676 [Methylibium petroleiphilum PM1] gi|124259644|gb|ABM94638.1| hypothetical protein Mpe_A1676 [Methylibium petroleiphilum PM1] Length = 217 Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 16/110 (14%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD S+ V + + A ++ ++ +RG TD + R++ +RA + Sbjct: 104 FDFGSARVAIPPDVTAALVED--AKNSPLVLLRGRTDGTTDAPTES---RIARERAAAVR 158 Query: 297 QVLMKSGVSEDRISKISGFAHHRL----KIASDPM--NSANRRIDILVED 340 L+ +GV RI ++ + NRR++I + Sbjct: 159 DYLVAAGVDPARIRAT-----YQPAGDHVADNASAGGRGLNRRVEIELYR 203 >gi|91784930|ref|YP_560136.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans LB400] gi|91688884|gb|ABE32084.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans LB400] Length = 212 Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 68/188 (36%), Gaps = 24/188 (12%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 L ++ LA + + +A+ + + + L + + + + + Sbjct: 32 QKSTSDLRYQQELANAKASKGDSVARMMQTLGAKLGNGEASGLMTLDRSTNRLTLR---- 87 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNI------ 280 +F++ S+ PE + + LAH + + G+TD P Sbjct: 88 --DGVFERGSACLTPEARAAIGAVQGELAHFIADNPKARMLVEGYTDNLPVTRPVIDYQR 145 Query: 281 ----ARDNWRLSLDRAYSAYQVLMK--SGVSEDRISKISGFAHHRLKIASDPMNSANRRI 334 DN+ LS RA A + L+ S + RI ++G+ R D + NRR+ Sbjct: 146 FCTVYDDNFTLSAARAREARRALLGTISDDAAKRIV-VAGYGESRPLPGVDAADPRNRRV 204 Query: 335 DILVEDRQ 342 ++ Q Sbjct: 205 EVQFLVDQ 212 >gi|126728677|ref|ZP_01744492.1| Outer membrane protein, OmpA/MotB family [Sagittula stellata E-37] gi|126710607|gb|EBA09658.1| Outer membrane protein, OmpA/MotB family [Sagittula stellata E-37] Length = 703 Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 51/157 (32%), Gaps = 13/157 (8%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISI---IDQRN 233 P + + R A + L+ VA + + R + + Sbjct: 528 PQVSSRGNEERTIYREGTDAATLEQALASQVAPQVGRTFSLNQIRNIDRVRQLVPEVSVD 587 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFRNIARDNWRLS 288 T F+ +S+ P+ L +G L + I GHTDA N LS Sbjct: 588 TINFETNSAAIRPDEAQELAALGNALKAFIDKNPSEVFLIEGHTDAV---GNYAYNLALS 644 Query: 289 LDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIAS 324 RA S L + V + + + G+ L + + Sbjct: 645 DRRAESVALALTEYFKVPPENMV-LQGYGESDLLVPT 680 >gi|269104043|ref|ZP_06156740.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268163941|gb|EEZ42437.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 261 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 9/107 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F + S LP L + +L + + GHTD DN+ L L RA + Sbjct: 136 FALNRSELLPAYQQALTQAAAILKRHRHWHVKLVGHTDTQ---GQKHDNYHLGLTRANNV 192 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRI--DILV 338 + L++ GV+ ++ + + + M ANR++ +ILV Sbjct: 193 KRFLLEHGVNGHQV-SVLSTGESQAVPDTHSRTMQLANRQVVAEILV 238 >gi|219853797|ref|YP_002470919.1| hypothetical protein CKR_0454 [Clostridium kluyveri NBRC 12016] gi|219567521|dbj|BAH05505.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 248 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 31/173 (17%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT------PMFDKSS 241 ++K+L++L ++ + V +I++ + G+ I+I +F+ + Sbjct: 60 QQKQLKNLRLQVEKVI--GVRQSIIEDIRKSFQNAGLDINIDKNTGDIVFSSDVLFEFNK 117 Query: 242 SIPLPETIVVLQKIGEVLAHS---------TEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + PE L K + I I GHTD N LS RA Sbjct: 118 ADIRPEFKSNLDKFIPQYVNVLTSPKYISSVSEIVIEGHTDNI---GDYNYNMDLSQKRA 174 Query: 293 YSAYQVLMKSGVSE---------DRISKISGFAHHRLKIASDP--MNSANRRI 334 S ++ + I +G + +L SD +RR+ Sbjct: 175 NSIVNYILNNNFKNLDSYSKENLKNIITANGRSKSQLIKNSDGSVNQEKSRRV 227 >gi|183222494|ref|YP_001840490.1| hypothetical protein LEPBI_I3149 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912532|ref|YP_001964087.1| OmpA-family lipoprotein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777208|gb|ABZ95509.1| OmpA-family lipoprotein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780916|gb|ABZ99214.1| Putative bacterial outer membrane protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 189 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%) Query: 268 IRGHTDAS---PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 I GH DAS + N S R+ + L+K G+ +RI + + Sbjct: 114 ITGHADASGPEEAEGAKKGNGFYSQIRSDAMKDALVKQGIPAERIVTKAA-GSSKPISGF 172 Query: 325 DPMNSANRRIDILVEDR 341 D ++ NRR+ V + Sbjct: 173 DEKDAINRRVTFQVVSK 189 >gi|217419973|ref|ZP_03451479.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 576] gi|217397277|gb|EEC37293.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 576] Length = 517 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 421 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 477 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 478 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 513 >gi|167814044|ref|ZP_02445724.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 91] gi|167844146|ref|ZP_02469654.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei B7210] gi|167892651|ref|ZP_02480053.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 7894] Length = 507 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 411 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 467 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 468 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 503 >gi|121598969|ref|YP_991521.1| cytochrome c oxidase, subunit II [Burkholderia mallei SAVP1] gi|124385712|ref|YP_001027405.1| cytochrome c oxidase, subunit II [Burkholderia mallei NCTC 10229] gi|126450607|ref|YP_001082370.1| cytochrome c oxidase, subunit II [Burkholderia mallei NCTC 10247] gi|167717920|ref|ZP_02401156.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei DM98] gi|167736940|ref|ZP_02409714.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 14] gi|167822565|ref|ZP_02454036.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 9] gi|238563018|ref|ZP_00439522.2| cytochrome c oxidase, subunit II [Burkholderia mallei GB8 horse 4] gi|251767567|ref|ZP_02267750.2| cytochrome c oxidase, subunit II [Burkholderia mallei PRL-20] gi|254175026|ref|ZP_04881687.1| cytochrome c oxidase, subunit II [Burkholderia mallei ATCC 10399] gi|254181939|ref|ZP_04888536.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1655] gi|254207100|ref|ZP_04913451.1| cytochrome c oxidase, subunit II [Burkholderia mallei JHU] gi|254357584|ref|ZP_04973858.1| cytochrome c oxidase, subunit II [Burkholderia mallei 2002721280] gi|121227779|gb|ABM50297.1| cytochrome c oxidase, subunit II [Burkholderia mallei SAVP1] gi|124293732|gb|ABN03001.1| cytochrome c oxidase, subunit II [Burkholderia mallei NCTC 10229] gi|126243477|gb|ABO06570.1| cytochrome c oxidase, subunit II [Burkholderia mallei NCTC 10247] gi|147752642|gb|EDK59708.1| cytochrome c oxidase, subunit II [Burkholderia mallei JHU] gi|148026648|gb|EDK84733.1| cytochrome c oxidase, subunit II [Burkholderia mallei 2002721280] gi|160696071|gb|EDP86041.1| cytochrome c oxidase, subunit II [Burkholderia mallei ATCC 10399] gi|184212477|gb|EDU09520.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1655] gi|238521497|gb|EEP84948.1| cytochrome c oxidase, subunit II [Burkholderia mallei GB8 horse 4] gi|243062286|gb|EES44472.1| cytochrome c oxidase, subunit II [Burkholderia mallei PRL-20] Length = 517 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 421 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 477 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 478 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 513 >gi|254187872|ref|ZP_04894384.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei Pasteur 52237] gi|254196504|ref|ZP_04902928.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei S13] gi|254296011|ref|ZP_04963468.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 406e] gi|157806128|gb|EDO83298.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 406e] gi|157935552|gb|EDO91222.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei Pasteur 52237] gi|169653247|gb|EDS85940.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei S13] Length = 492 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 396 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 452 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 453 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 488 >gi|254201767|ref|ZP_04908131.1| cytochrome c oxidase, subunit II [Burkholderia mallei FMH] gi|147747661|gb|EDK54737.1| cytochrome c oxidase, subunit II [Burkholderia mallei FMH] Length = 522 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 426 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 482 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 483 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 518 >gi|86359052|ref|YP_470944.1| outer membrane lipoprotein [Rhizobium etli CFN 42] gi|86283154|gb|ABC92217.1| outer membrane lipoprotein [Rhizobium etli CFN 42] Length = 178 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 41/133 (30%), Gaps = 10/133 (7%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 + + G + +++ D+ FD S+ + L + + L Sbjct: 43 NSAGDMGLGAGAATPGSTQDFTVNVGDR---IFFDTDSTSIRADAAQTLDRQAQWLGRYP 99 Query: 264 EVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI 322 ++ GH D N L RA + L GV R+ IS + R Sbjct: 100 NYQITVEGHADER---GTREYNLALGARRAAATKDYLASRGVPAQRMKTIS-YGKERPVA 155 Query: 323 --ASDPMNSANRR 333 S NRR Sbjct: 156 VCDDISCWSQNRR 168 >gi|167917395|ref|ZP_02504486.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei BCC215] Length = 517 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 421 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 477 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 478 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 513 >gi|167909366|ref|ZP_02496457.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 112] Length = 525 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 429 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 485 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 486 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 521 >gi|53718092|ref|YP_107078.1| putative cytochrome c oxidase [Burkholderia pseudomallei K96243] gi|53724516|ref|YP_104674.1| cytochrome c oxidase subunit II [Burkholderia mallei ATCC 23344] gi|76810581|ref|YP_332086.1| cytochrome c oxidase subunit II [Burkholderia pseudomallei 1710b] gi|126455009|ref|YP_001064790.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1106a] gi|226193702|ref|ZP_03789305.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei Pakistan 9] gi|237810693|ref|YP_002895144.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei MSHR346] gi|242315097|ref|ZP_04814113.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1106b] gi|254259540|ref|ZP_04950594.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1710a] gi|52208506|emb|CAH34441.1| putative cytochrome c oxidase [Burkholderia pseudomallei K96243] gi|52427939|gb|AAU48532.1| cytochrome c oxidase, subunit II [Burkholderia mallei ATCC 23344] gi|76580034|gb|ABA49509.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1710b] gi|126228651|gb|ABN92191.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1106a] gi|225934280|gb|EEH30264.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei Pakistan 9] gi|237505984|gb|ACQ98302.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei MSHR346] gi|242138336|gb|EES24738.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1106b] gi|254218229|gb|EET07613.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 1710a] Length = 525 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 429 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 485 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 486 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 521 >gi|319903022|ref|YP_004162750.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] gi|319418053|gb|ADV45164.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] Length = 411 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 54/164 (32%), Gaps = 19/164 (11%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT------- 234 K + ++ + + + + + + + + I +++ D Sbjct: 253 KKATIAPMQQTESIVEYEKPSTEQNIVKD--SVISEHPMKDEIKVTVTDPTERTSSIKFP 310 Query: 235 -PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRA 292 F +S P L +I +L + + +I G D + N R+S RA Sbjct: 311 IISFSFNSVWIEPSQRTKLHEIKLLLEKNPQTTITISGWCDN---KGSEDVNKRISAKRA 367 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + L++ G+S +RI G RR +I Sbjct: 368 DAVKLWLVRRGISTERIIT-EGCG----IDRQQTDVDKVRRAEI 406 >gi|89053467|ref|YP_508918.1| OmpA/MotB [Jannaschia sp. CCS1] gi|88863016|gb|ABD53893.1| OmpA/MotB [Jannaschia sp. CCS1] Length = 172 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 + +F S VL + L + E + I GH D N L R Sbjct: 62 DRVLFAVDQSTLSSGAQSVLAGQAQWLLSNPEFTALIEGHADEQ---GTREYNLALGARR 118 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVEDRQG 343 A + + L+ GV + R+ IS + R + + S NRR ++ G Sbjct: 119 AAAVREYLVSQGVPDARLRTIS-YGKERPLQICSDEACYSQNRRAVTVISAGLG 171 >gi|209546851|ref|YP_002278769.1| OmpA/MotB domain-containing protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538095|gb|ACI58029.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 184 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 9/111 (8%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWR 286 I++ F + S+ + L L + + ++G D S + Sbjct: 68 ILNVGRRIYFKQDSAALDSVAMATLDNQANWLNRNPTWLLKLQGFADDSGSASKMET--- 124 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS---ANRRI 334 LS RA +A L GV R+ G+ + R S NRR+ Sbjct: 125 LSQKRADAAMAYLASKGVDTKRMWA-KGYGNDREVRDC-TERSCKVQNRRV 173 >gi|291288745|ref|YP_003505561.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290885905|gb|ADD69605.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 296 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 4/77 (5%) Query: 260 AHSTEVISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 A++ + I GHTD DN+ LS RA L ++G+ + + + G Sbjct: 213 ANNAKKYVIIGHTDDVRVVPNTEYADNFELSAKRAAFFLNKLTEAGIPAENVQTL-GLGP 271 Query: 318 HRLKIASDP-MNSANRR 333 + NRR Sbjct: 272 AFPAAPNKKNGQPLNRR 288 >gi|163789217|ref|ZP_02183659.1| hypothetical protein FBALC1_00030 [Flavobacteriales bacterium ALC-1] gi|159875432|gb|EDP69494.1| hypothetical protein FBALC1_00030 [Flavobacteriales bacterium ALC-1] Length = 238 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 14/126 (11%) Query: 222 TGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNI 280 + S + ++ FD L + E ISI G D Sbjct: 12 FQLAFSQQELKHEVYFDTDKYNIPETEHSRLLLFLSKVEEMDIEKISIYGFCDDR---GS 68 Query: 281 ARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-------DPMNSANRR 333 N LS RA + V + E I+ + G + + + NR+ Sbjct: 69 DNYNLVLSQQRADAIKTVFSNNEFDESVITNVDGKGE---ILLNIVHEENLSKIRGLNRK 125 Query: 334 IDILVE 339 ++I+V+ Sbjct: 126 VEIIVK 131 Score = 39.6 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 5/75 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN----WRL 287 + +F S E+ VL KI +LA T +I GH + A D L Sbjct: 163 DNLLFRTGYSYLTKESKPVLDKIAVILAERTNVYFTIEGHVCCTQGERDAIDRKTKKRNL 222 Query: 288 SLDRAYSAYQVLMKS 302 S+ RA Y L+K Sbjct: 223 SVARAKYIYDYLVKK 237 >gi|260777763|ref|ZP_05886656.1| hypothetical protein VIC_003160 [Vibrio coralliilyticus ATCC BAA-450] gi|260605776|gb|EEX32061.1| hypothetical protein VIC_003160 [Vibrio coralliilyticus ATCC BAA-450] Length = 1581 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 17/157 (10%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 ++ +KI L A + G I I N+ P + Sbjct: 574 ENQQEKIEQVLEKARAASDEITATMVNNSRGAGIKIEFNFNSR--KSELERNAPLFSQLA 631 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRIS 310 + EVL + + I GH N ++S DRA A Q+L++S V +DRI Sbjct: 632 SALAEVLESESNLRVEIEGHACQVD---TEEANMKVSADRANYAKQLLIESSDVFKDRI- 687 Query: 311 KISGFAHHRL---------KIASDPMNSANRRIDILV 338 ++ F + ++P NRR++I + Sbjct: 688 SVAVFGESKPLYIPKKGESIDRNNPNLRQNRRVEIRI 724 >gi|187918870|ref|YP_001887901.1| RND family efflux transporter MFP subunit [Burkholderia phytofirmans PsJN] gi|187717308|gb|ACD18531.1| efflux transporter, RND family, MFP subunit [Burkholderia phytofirmans PsJN] Length = 560 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 15/120 (12%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWR 286 + + F S+ ++ L + L A I G+TD+ N + Sbjct: 451 LPAGQTAVFFALGSASLDSQSADALAGVARRLLAAPGSRAVISGYTDS---SGSYEANVK 507 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMNSANRRIDILVEDRQG 343 L+ RA + L+ +GV RI R + P +RR+D+ + G Sbjct: 508 LAAARAATVRSALIVAGVDVARIDM------RRPARIVASDAPD--KSRRVDVTLAPSTG 559 >gi|282877841|ref|ZP_06286653.1| OmpA family protein [Prevotella buccalis ATCC 35310] gi|281300052|gb|EFA92409.1| OmpA family protein [Prevotella buccalis ATCC 35310] Length = 313 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 74/217 (34%), Gaps = 9/217 (4%) Query: 121 KKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSK 180 + Q + + N + T+ + + + + ++++ Sbjct: 101 QNGTQPIYPPYPPVQNLMPENAESENSTQTEQLQEQINQLQKQIETLSSTVQDPAVKQQI 160 Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 + + R+Q + +++ L ++ L + +T + F+ S Sbjct: 161 DSMARQLNNFRVQKDSVIMAAPLEETATESAQNHELVQPAQTAKIAPFDTNIRQVFFEIS 220 Query: 241 SSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S E L + E L ++ + + G + N L++ R S L Sbjct: 221 SDALSKEAKHTLDGLAETLKNNRKLKAELTGFSSQD---GPKAFNRDLAMRRMNSVRTYL 277 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 +K GV +++S +S + MN+ RR+++ Sbjct: 278 LKKGVHANQVSALS-YG----IDKHSEMNTYARRVEV 309 >gi|222111071|ref|YP_002553335.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY] gi|221730515|gb|ACM33335.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY] Length = 179 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 10/125 (8%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274 V+ T + + F + P L + + + + + G DA Sbjct: 62 VVIMITEDAASVVVEGGVVKFFFATGKAELAPGANEALGDVVKGVVDGGKTAVVSGFHDA 121 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRR 333 + A N L+ RA + L GV+E+++ + + N+ RR Sbjct: 122 T---GDAAVNAELAKQRALAVRDALKALGVAEEKVEL------KKPEATQGSGSNAEARR 172 Query: 334 IDILV 338 +++++ Sbjct: 173 VEVIL 177 >gi|121594411|ref|YP_986307.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42] gi|120606491|gb|ABM42231.1| OmpA/MotB domain protein [Acidovorax sp. JS42] Length = 179 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 10/125 (8%) Query: 215 VLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDA 274 V+ T + + F + P L + + + + + G DA Sbjct: 62 VVIMITEDAASVVVEGGVVKFFFATGKAELAPGANEALGDVVKGVVDGGKTAVVSGFHDA 121 Query: 275 SPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRR 333 + A N L+ RA + L GV+E+++ + + N+ RR Sbjct: 122 T---GDAAVNAELAKQRALAVRDALKALGVAEEKVEL------KKPEATQGSGSNAEARR 172 Query: 334 IDILV 338 +++++ Sbjct: 173 VEVIL 177 >gi|239816681|ref|YP_002945591.1| OmpA/MotB domain protein [Variovorax paradoxus S110] gi|239803258|gb|ACS20325.1| OmpA/MotB domain protein [Variovorax paradoxus S110] Length = 183 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 11/116 (9%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + D F S+ P L + + + S + G D + A N Sbjct: 78 IRVADGVVNFYFATGSADLAPGAAEALAAVIKGV-ESGRKAVVSGFHDTT---GDAAINE 133 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILVED 340 +L+ RA + VL+ GV ++ R I + ++ RR+++ + D Sbjct: 134 QLAKKRAETVRDVLVGLGVPAGKVDL------QRPAITAGSGNDAQARRVEVKLVD 183 >gi|226953610|ref|ZP_03824074.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244] gi|226835644|gb|EEH68027.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244] Length = 79 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 6/80 (7%) Query: 252 LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRI 309 + K+ E LA I GHTD + N RLSL RA S L+ + V R+ Sbjct: 4 IAKVAEKLAEYPNATARIEGHTDNT---GPRALNERLSLARANSVKSALVNEYNVDASRL 60 Query: 310 SKISGFAHHRLKIASDPMNS 329 S GFA + + Sbjct: 61 ST-QGFAWDQPIADNKTKEG 79 >gi|332883547|gb|EGK03830.1| hypothetical protein HMPREF9456_01897 [Dysgonomonas mossii DSM 22836] Length = 381 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 10/103 (9%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 N F S++ V + + L + I G+ D A N +LS R Sbjct: 279 NVVFFRLGSAVIDKNQEVSIYNTAKYLQDNPSKNVKIVGYADKK--TGTASINMKLSEKR 336 Query: 292 AYSAYQVLM-KSGVSEDRISKISGFAHH-RLKIASDPMNSANR 332 A + L+ K ++ +R+ + + + + NR Sbjct: 337 AKNVANALINKYNINSNRVK-VEWKGDTEQPYAEN----AWNR 374 >gi|254476965|ref|ZP_05090351.1| outer membrane protein, OmpA/MotB family [Ruegeria sp. R11] gi|214031208|gb|EEB72043.1| outer membrane protein, OmpA/MotB family [Ruegeria sp. R11] Length = 587 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 70/228 (30%), Gaps = 11/228 (4%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 S + + + N + + +E T+ G+ + D +K+ Sbjct: 346 QPGSNVTTYRFADGSTRTVVVRENGVEVETIRSAEGRVLRRTKLLPDGRSVVLFDDTQKA 405 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 N LP + +++ + + + + + Sbjct: 406 ERVVVNE-LPQVQEDRSAVSSSRAVSAEDLAAALAAQDAKSVERRFSLAQIRNIDAVRRL 464 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFRNIA 281 + + ++ FD SS+ P+ L +G L + I GHTDA A Sbjct: 465 TPVINVDSVNFDTGSSVIRPQEAEELAALGNALRELIDRNPAEVFLIEGHTDAV---GAA 521 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328 N LS RA + L + V + + + G+ L + + Sbjct: 522 TFNLALSDRRAETVALALTEYFDVPPENMV-VQGYGESDLAVRTLTAE 568 >gi|270339927|ref|ZP_06006476.2| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270333289|gb|EFA44075.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 388 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 57/172 (33%), Gaps = 14/172 (8%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + + ++ L +++ + + + + + Sbjct: 227 ATWEKTPDVDAIKALSQSQIDALNAQLNDANAENARLKNLLANQPKPETPKAVKEFVTTP 286 Query: 233 NTPMFDKSSSIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ + + + +V +Q + + + +++ G+ D+ N RLS R Sbjct: 287 VSVFFNINRTNIASQKDLVNVQAVAKYAKENGSKLAVTGYADS--ATGTPEINQRLSEGR 344 Query: 292 AYSAYQVLMKSGVSEDRISKISGFA---HHRLKIASDPMNSANRRIDILVED 340 A + L+K G+ +IS + G S NRR + V D Sbjct: 345 AATVADELVKLGIDRSKISTV-GKGGVDDLSPI-------SFNRRATVQVTD 388 >gi|257486672|ref|ZP_05640713.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 160 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRID 335 N ++S +RA S + SG+ +R+S+ G + A+D + NRR++ Sbjct: 3 SGPTEANQKISQERAQSVAAIFRLSGLERNRLSQ-RGMGAVMPRAANDSLQGRALNRRVE 61 Query: 336 IL 337 IL Sbjct: 62 IL 63 >gi|282880767|ref|ZP_06289463.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1] gi|281305301|gb|EFA97365.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1] Length = 314 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 77/202 (38%), Gaps = 13/202 (6%) Query: 142 HCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKK--- 198 K+S T++S++ K L + D + + + + + + + K++ AKK Sbjct: 119 QPKSSDTKESQEVKQLQEQIDQLQKQIEVLSQTVKDPTLRQQVESMVKQQNALCAKKDTV 178 Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIID-QRNTPMFDKSSSIPLPETIVVLQKIGE 257 I + + + + ++ D F+ SS E L + + Sbjct: 179 IMRAPANNPTEQCCQEKALVEPAHPVKVTPFDTNLRQVFFEISSKQLSKEAEHTLDAVVD 238 Query: 258 VLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 VL ++ + + + G + N L++ R S L+ GV+ ++IS +S + Sbjct: 239 VLKNNRDLKVELTGFSSND---GPKAFNKDLAMKRMNSVRSYLVNHGVNTNQISALS-YG 294 Query: 317 HHRLKIASDPMNSANRRIDILV 338 M + RR+++ + Sbjct: 295 ----IDKKSEMKTYARRVELCI 312 >gi|237716074|ref|ZP_04546555.1| outer membrane porin F [Bacteroides sp. D1] gi|262407686|ref|ZP_06084234.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294643794|ref|ZP_06721592.1| OmpA family protein [Bacteroides ovatus SD CC 2a] gi|294808454|ref|ZP_06767207.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b] gi|298480834|ref|ZP_06999029.1| outer membrane porin F [Bacteroides sp. D22] gi|229443721|gb|EEO49512.1| outer membrane porin F [Bacteroides sp. D1] gi|262354494|gb|EEZ03586.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292640883|gb|EFF59103.1| OmpA family protein [Bacteroides ovatus SD CC 2a] gi|294444382|gb|EFG13096.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b] gi|295085223|emb|CBK66746.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Bacteroides xylanisolvens XB1A] gi|298272857|gb|EFI14423.1| outer membrane porin F [Bacteroides sp. D22] Length = 379 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 7/125 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS---IIDQRNTPMFDKSSSIPL 245 + +L D+ +++ L G V + +++ R +F+ S Sbjct: 232 ESQLNDMRDRVN-ALKGENESLKRDLVEARNKKPEVIVKKEAGFIPRYVVVFNIGKSNIS 290 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304 + ++ + + + + +V ++ G+ D A N +LS RA + +++ GV Sbjct: 291 KREYMNIEAMAKGIKATDKVFTVTGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFGV 348 Query: 305 SEDRI 309 ++ Sbjct: 349 PASQL 353 >gi|213420068|ref|ZP_03353134.1| hypothetical protein Salmonentericaenterica_20830 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 64 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 3/47 (6%) Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVED 340 + L GV R+ I G + + NRR++ILV + Sbjct: 19 RRCLTSGGVPAGRVH-IVGKGDTVPVADNGSKAGRAKNRRVEILVVE 64 >gi|71908555|ref|YP_286142.1| hypothetical protein Daro_2942 [Dechloromonas aromatica RCB] gi|71848176|gb|AAZ47672.1| hypothetical protein Daro_2942 [Dechloromonas aromatica RCB] Length = 425 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 65/187 (34%), Gaps = 13/187 (6%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 ++ D + + + L + + + A K V + Sbjct: 243 AEAIDAYDAGHYQNALELYGSALATPAGNQFRVHNGIYLAHWKLGHRQQAAAAFGKIVDY 302 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPF 277 + + + + + F + + + P + L+ I + S + + GHT + Sbjct: 303 GLEHRRLAVKFLFRPGSTAFVQDAKLSGP-YPLWLKTIAQRSGGSANCLEVTGHTSPT-- 359 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSED---RISKISGFAHHRLKIAS---DPMNSAN 331 N RLSL RA + L +G+S R+ +G + + + D ++ + Sbjct: 360 -GPEPLNERLSLLRAEYVKERL--AGMSPSLAKRMIA-NGVGSRQTLVGTGRDDASDALD 415 Query: 332 RRIDILV 338 RR++ V Sbjct: 416 RRVEFKV 422 >gi|167901146|ref|ZP_02488351.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei NCTC 13177] Length = 507 Score = 57.3 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 411 FETGKSELPADAKDAIAAAAEYVRAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 467 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 468 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 503 >gi|48429443|gb|AAT42489.1| HMP-like outer membrane protein [Acinetobacter junii] Length = 284 Score = 57.3 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 6/85 (7%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ + L I GHTD + + N RLSL RA Sbjct: 202 RVFFDTNKSNIKDQYKPEVAKVADALNTFPNATARIEGHTDNT---GPRKLNERLSLARA 258 Query: 293 YSAYQVLM-KSGVSEDRISKISGFA 316 S L+ + + R+S GFA Sbjct: 259 NSVKSALVSEYNIDASRLST-QGFA 282 >gi|197337147|ref|YP_002158389.1| OmpA family protein [Vibrio fischeri MJ11] gi|197314399|gb|ACH63848.1| OmpA family protein [Vibrio fischeri MJ11] Length = 1590 Score = 57.3 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 24/182 (13%), Positives = 52/182 (28%), Gaps = 31/182 (17%) Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS----IIDQ 231 + ++K A K + + ++A + + + + + I D Sbjct: 565 EEIVEQKKKAEKARGNMAEVASEYLKHIPVWTETQLEINKENKQAFEQLTIKNKTLFNDD 624 Query: 232 RNTPM---FDKSSSIPLPETIVV-LQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 + + F+ + + +I L + I I GHT + N Sbjct: 625 YGSGIEVVFEFDKKTADTSMVRQGIAEIVSFLEKQPDVHIVIEGHTCQV---GTNQYNMN 681 Query: 287 LSLDRAYSAYQVLMKSGVSEDRI---SKISGFAHHRLKIASDPMNS---------ANRRI 334 LS RA + + ++ + F + + NRR+ Sbjct: 682 LSQQRAQNVADLF------PKKLQEKITVIAFGETQPLV-EATGREVSSDNLKLKVNRRV 734 Query: 335 DI 336 I Sbjct: 735 KI 736 >gi|126442214|ref|YP_001057542.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 668] gi|134279592|ref|ZP_01766304.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 305] gi|126221707|gb|ABN85213.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 668] gi|134248792|gb|EBA48874.1| cytochrome c oxidase, subunit II [Burkholderia pseudomallei 305] Length = 525 Score = 57.3 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 429 FETGKSELPADAKDAIAAAAEYVRAHPDAKLALSGFTDKT---GSADANAELAKRRAQVV 485 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 486 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 521 >gi|254523963|ref|ZP_05136018.1| conserved hypothetical protein, putative [Stenotrophomonas sp. SKA14] gi|219721554|gb|EED40079.1| conserved hypothetical protein, putative [Stenotrophomonas sp. SKA14] Length = 2015 Score = 57.3 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 24/235 (10%), Positives = 59/235 (25%), Gaps = 8/235 (3%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 ++ + + + + T + + Sbjct: 1754 LADVHGGDARLGRNFIIKLDPATVPAGAELTTENPLLRRVTQGVPTRFSFGVRLPPSPQA 1813 Query: 133 YLSNSQQSEH----CKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 + + S ++ L K ++ + + + + Sbjct: 1814 SAERMELALGEVLFAPGSSELRADYRPVLLKMAEVVNRYQGGDVVIAANGESQALAFARA 1873 Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 L +++ + + + V + + + +FD + E Sbjct: 1874 AVVRDALQAEVAESARAGLTVQLRTDVQDPHSLLAGVDANGALLGNVLFDTDKAAVREEF 1933 Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 +L I L +S+ GHTD R N L L RA + ++ L Sbjct: 1934 KPLLAAIAARLEKMGGGQVSLVGHTD---VRGSHAYNQALGLRRASAVFEALRSQ 1985 >gi|332830269|gb|EGK02897.1| hypothetical protein HMPREF9455_01147 [Dysgonomonas gadei ATCC BAA-286] Length = 383 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 11/109 (10%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 N F S+ V + + L + + + G+ D N +LS R Sbjct: 281 NVVFFRLGSANIDKNQEVSIFNTAKYLQDNPSAKVKVVGYADKK--TGTPSINEKLSEKR 338 Query: 292 AYSAYQVLMKS-GVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILV 338 A + L+K + +R+ + + + + N R+ I V Sbjct: 339 AKNVANELIKKYNIDSNRV-TVEWKGDTVQPYAEN----AWN-RVAIFV 381 >gi|218961922|ref|YP_001741697.1| hypothetical protein CLOAM1655 [Candidatus Cloacamonas acidaminovorans] gi|167730579|emb|CAO81491.1| hypothetical protein CLOAM1655 [Candidatus Cloacamonas acidaminovorans] Length = 201 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 20/154 (12%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 + + + I+I +F+ S + + +++ + L Sbjct: 45 QKDIDDFKSMFKSLDLELNQENNEIII-----PADILFEFDKSELKSDNLPKIRQFRKKL 99 Query: 260 AHST--------EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV--SEDRI 309 + I I GHTD N++LSLDR+ S + + D Sbjct: 100 KNYMQVGDRKKRYCIIIEGHTDTV---GDKNYNYKLSLDRSLSLIKEFKEDDFFRDPDID 156 Query: 310 SKISGFAHHRLKIAS--DPMNSANRRIDILVEDR 341 + F +L + + + +N NRR+ I + + Sbjct: 157 LIPAAFGESKLAVPTPDNTINKKNRRVVIRIVPK 190 >gi|153953154|ref|YP_001393919.1| hypothetical protein CKL_0517 [Clostridium kluyveri DSM 555] gi|146346035|gb|EDK32571.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] Length = 245 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 31/173 (17%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT------PMFDKSS 241 ++K+L++L ++ + V +I++ + G+ I+I +F+ + Sbjct: 57 QQKQLKNLRLQVEKVI--GVRQSIIEDIRKSFQNAGLDINIDKNTGDIVFSSDVLFEFNK 114 Query: 242 SIPLPETIVVLQKIGEVLAHS---------TEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + PE L K + I I GHTD N LS RA Sbjct: 115 ADIRPEFKSNLDKFIPQYVNVLTSPKYISSVSEIVIEGHTDNI---GDYNYNMDLSQKRA 171 Query: 293 YSAYQVLMKSGVSE---------DRISKISGFAHHRLKIASDP--MNSANRRI 334 S ++ + I +G + +L SD +RR+ Sbjct: 172 NSIVNYILNNNFKNLDSYSKENLKNIITANGRSKSQLIKNSDGSVNQEKSRRV 224 >gi|270157638|ref|ZP_06186295.1| conserved hypothetical protein [Legionella longbeachae D-4968] gi|269989663|gb|EEZ95917.1| conserved hypothetical protein [Legionella longbeachae D-4968] Length = 230 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 30/173 (17%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 K ++ ++ L A ++ + I D +FD SS+ P Sbjct: 43 KEFEETKSDLAQALQKEFAKDLSQWNAELLGDMTIRFDNPD----VLFDTGSSVVKPAFK 98 Query: 250 VVLQKI---------GEVLAHSTEVISIRGHTD-----ASPFRNIARDNWRLSLDRAYSA 295 +L E +S + I I GHT + + N RLS +RA S Sbjct: 99 RILNDFIPRYISLVSSEKYRNSIKEIRIEGHTSKKWALDTDEKTAYIKNMRLSQERAQSM 158 Query: 296 YQVLMKSGVSE--------DRISKISGFAHHRLKIASDPMNSANR--RIDILV 338 + ++ + + SGF+ + + NR R++ ++ Sbjct: 159 LEYILS--LPSLLEHEKWMRKYLTSSGFSSSKPVFNQLHIADDNRSQRVEFVI 209 >gi|332881530|ref|ZP_08449179.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680528|gb|EGJ53476.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 377 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 12/147 (8%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 +S + A + + LQ+ K IS L K T + Sbjct: 222 AALNATISSMEAEAAGKDRALQNAQKTISDLQKDLNDCKNKKVPTTTTQA------VEKS 275 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 +F +SSS + + ++ L ++ +SI G+ A+ N +LS Sbjct: 276 EYVVIFRQSSSKVDALQMPNIDRLASYLKKNSSAKVSISGYASPE---GNAKFNQKLSEK 332 Query: 291 RAYSAYQVLMK-SGVSEDRISKISGFA 316 RA + +L+K G+S +RI G Sbjct: 333 RAEAVKNILVKEYGISANRIET-QGKG 358 >gi|149202957|ref|ZP_01879928.1| OmpA/MotB [Roseovarius sp. TM1035] gi|149143503|gb|EDM31539.1| OmpA/MotB [Roseovarius sp. TM1035] Length = 518 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 53/165 (32%), Gaps = 12/165 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + ++ + A I+ + + + + + V + + F+ Sbjct: 361 DQTPEEIEINAQGDRFANAIAQAGTEVGLEELQRMVRVLGPLKRLTTTFR-------FEA 413 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S ++ +++ + S A N ++L RA + + + Sbjct: 414 GSVRLDAQSRSNAEQLARAMELGHYDARRLVFVGFSDGDGPAGTNRDIALRRAETVQRAV 473 Query: 300 MKSGVSE--DRI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 M++ + +RI ++ F D NRR+++ V Sbjct: 474 MRAAETANLERIGLELDAFGEAMPMACDDTAWGRQVNRRVEVWVR 518 >gi|325279593|ref|YP_004252135.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324311402|gb|ADY31955.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712] Length = 377 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 59/164 (35%), Gaps = 11/164 (6%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ-RNTPMF 237 + K + + + L + V + I++ +T F Sbjct: 219 TAPKQAVIDEMAAANLVLANQVTQLQNRPPEIKVIEKEVVRPVETKNVEIVESIPSTIPF 278 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 +S++ ++ IG + ++ + I I G+ D N R+S +RA + Sbjct: 279 KFNSAVVQDIYDPLIYNIGTFMKNNPDVKIRIVGYADKF---GPINVNLRISQERAEAVA 335 Query: 297 QVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSANR--RIDIL 337 +L K G++ +R+ I + ++ NR ++I+ Sbjct: 336 NMLKKDYGINSNRMV-IEYVGKEKPYYNNNNKW--NRCAMVEII 376 >gi|29346915|ref|NP_810418.1| hypothetical protein BT_1505 [Bacteroides thetaiotaomicron VPI-5482] gi|29338813|gb|AAO76612.1| outer membrane protein [Bacteroides thetaiotaomicron VPI-5482] Length = 362 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 7/120 (5%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 +V + + E + + I + F +S+ + + + E L + Sbjct: 232 EPVVTEQPKPAPVVEQPQPKKEVVIEPLKQNIFFALNSAKIQDDQQAKISSLVEYLEKHS 291 Query: 264 E-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF-AHH-RL 320 +S+ G+ D N LS RA + ++L GV DRI + G+ + Sbjct: 292 AAKVSVTGYADKE--TGNPNINMTLSEKRAKNVIEMLKAKGVVADRI--VIGYKGDTVQP 347 >gi|300309835|ref|YP_003773927.1| outer membrane protein peptidoglycan-associated (lipo)protein [Herbaspirillum seropedicae SmR1] gi|300072620|gb|ADJ62019.1| outer membrane protein peptidoglycan-associated (lipo)protein [Herbaspirillum seropedicae SmR1] Length = 232 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 57/171 (33%), Gaps = 27/171 (15%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 ++ + L + ++ + + I D T +F S+ P+ Sbjct: 46 EFEETKSDMLQALQKEFSRDLKQW--NAELLGDMTIRFNDP--TVLFATGSAELRPKFKQ 101 Query: 251 VLQKIG---------EVLAHSTEVISIRGHTD-----ASPFRNIARDNWRLSLDRAYSAY 296 +L+ + + + I I GHT ++ + N LS R SA Sbjct: 102 ILRDFFPRYVTMLTSDKYRDAIKEIRIEGHTSRSWTNSTDTKTAYFLNMELSQARTRSAL 161 Query: 297 QVLMKSGVSEDRI------SKISGFAHHRLKIASDPMNS---ANRRIDILV 338 + L++ E + +G + + D + AN+R++ + Sbjct: 162 EFLLRLPAVERQQDWLVGHVTANGLSSSKPISPDDNSAAAQLANQRVEFRI 212 >gi|160883800|ref|ZP_02064803.1| hypothetical protein BACOVA_01772 [Bacteroides ovatus ATCC 8483] gi|156110885|gb|EDO12630.1| hypothetical protein BACOVA_01772 [Bacteroides ovatus ATCC 8483] Length = 379 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 48/125 (38%), Gaps = 7/125 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245 + +L D+ +++ L G V + +++ + F+ S Sbjct: 232 ESQLNDMRDRVN-ALKGENESLKRDLVEARNKKPEVIVKKEAGFVPRLVVVFNIGKSNIS 290 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304 + ++ + + + + +V +I G+ D A N +LS RA + +++ GV Sbjct: 291 KREYMNIEAMAKGIKATDKVFTITGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFGV 348 Query: 305 SEDRI 309 ++ Sbjct: 349 PASQL 353 >gi|257126467|ref|YP_003164581.1| hypothetical protein Lebu_1722 [Leptotrichia buccalis C-1013-b] gi|257050406|gb|ACV39590.1| hypothetical protein Lebu_1722 [Leptotrichia buccalis C-1013-b] Length = 197 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 64/178 (35%), Gaps = 22/178 (12%) Query: 169 KEENYFLPPLSKEKILAMKRKKRLQDLAKKISS---TLSGLVADNIVKGVLFETTRTGIL 225 + + KI K+ + K + + +V D + + E + + Sbjct: 9 AKNDQTEQAEKYYKIAIQNGSKKAEKNLKILEKFPLMSNPMVMDYLAWDIPMEDAKGELK 68 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI---SIRGHTDASPFRNIAR 282 ISI F ++ ++ I + + G++D + Sbjct: 69 ISIRG------FKENGKDLNEFERNRMKGIVRKIWNKLYESADLEFIGYSDNTE------ 116 Query: 283 DNWRLSLDRAYSAYQVLMKSGV-SEDRISKISGFAHHRLKIASDPMNSA--NRRIDIL 337 N +LSL+RA ++ +SG+ E RI K+ G +D + NRR++I+ Sbjct: 117 -NKKLSLERAKRLAELFRESGLKDEMRIVKVLGKGSENSSDTNDTVEGRYNNRRVEII 173 >gi|152968039|ref|YP_001363823.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216] gi|151362556|gb|ABS05559.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216] Length = 180 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 38/118 (32%), Gaps = 18/118 (15%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDR- 291 +F S+ L IG + I + GHTD N LS R Sbjct: 70 DVLFAFGSADLPASAAGQLAGIGARIGRGHPTAIRVEGHTDGI---GDDAANQSLSERRA 126 Query: 292 -AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--------MNSANRRIDILVED 340 A +A +GV + GF R +ANRR+ +++ D Sbjct: 127 AAVAAALSAAAAGVP----VQQEGFGETRPLRPETTASGEDDPAARAANRRVTVVLRD 180 >gi|326776942|ref|ZP_08236207.1| OmpA/MotB domain protein [Streptomyces cf. griseus XylebKG-1] gi|326657275|gb|EGE42121.1| OmpA/MotB domain protein [Streptomyces cf. griseus XylebKG-1] Length = 215 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 6/79 (7%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + + G TD A LS RA + + VL K + +I G+ Sbjct: 133 KQNATKVRVFGFTDNL---GSAAHGDVLSKQRADAVHGVLSKE-LGATITYEIRGYGEQY 188 Query: 320 LKIASDPMNSA--NRRIDI 336 ++ NRR+++ Sbjct: 189 PIASNSNEEGRKKNRRVEV 207 >gi|254468321|ref|ZP_05081727.1| OmpA/MotB [beta proteobacterium KB13] gi|207087131|gb|EDZ64414.1| OmpA/MotB [beta proteobacterium KB13] Length = 165 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + + FD PE + ++ + A ++++GH D +R N L Sbjct: 58 QRSIYFDFDKFEVKPEYLDIVNAHAQYAADHPAAKMTLKGHAD---YRGSHEYNLALGQK 114 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDI 336 R+ S V+ SG S+ +I +S + + N S +RR+DI Sbjct: 115 RSVSVKDVMNTSGASDGQIETVS-YGEEE-ANQNCQGNECSQDRRVDI 160 >gi|301164479|emb|CBW24037.1| putative membrane protein [Bacteroides fragilis 638R] Length = 445 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 6/121 (4%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQK 254 +++ ++ L + + I ++ F + S+ L + Sbjct: 303 KERMKREIASLNMQLQQAHTVVKEKTGSDPILGFNELPPVYFKRGSAYLNVALYKNELCR 362 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 I + L E+ I GH D + N ++SL RA + L K G+ RI + Sbjct: 363 IVQTLKKYPELKVILSGHADHT---GNPDINQKISLQRAEALAAYLEKKGIDGKRI-AVK 418 Query: 314 G 314 G Sbjct: 419 G 419 >gi|260170794|ref|ZP_05757206.1| outer membrane porin F precursor [Bacteroides sp. D2] gi|293372828|ref|ZP_06619206.1| OmpA family protein [Bacteroides ovatus SD CMC 3f] gi|299149162|ref|ZP_07042223.1| outer membrane porin F [Bacteroides sp. 3_1_23] gi|315919128|ref|ZP_07915368.1| conserved hypothetical protein [Bacteroides sp. D2] gi|292632203|gb|EFF50803.1| OmpA family protein [Bacteroides ovatus SD CMC 3f] gi|298512829|gb|EFI36717.1| outer membrane porin F [Bacteroides sp. 3_1_23] gi|313693003|gb|EFS29838.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 379 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 48/125 (38%), Gaps = 7/125 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245 + +L D+ +++ L G V + +++ + F+ S Sbjct: 232 ESQLNDMRDRVN-ALKGENESLKRDLVEARNKKPEVIVKKEAGFVPRLVVVFNIGKSNIS 290 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304 + ++ + + + + +V +I G+ D A N +LS RA + +++ GV Sbjct: 291 KREYMNIEAMAKGIKATDKVFTITGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFGV 348 Query: 305 SEDRI 309 ++ Sbjct: 349 PASQL 353 >gi|253566150|ref|ZP_04843604.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265766901|ref|ZP_06094730.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|251945254|gb|EES85692.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263253278|gb|EEZ24754.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 435 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 6/121 (4%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQK 254 +++ ++ L + + I ++ F + S+ L + Sbjct: 293 KERMKREIASLNMQLQQAHTVVKEKTGSDPILGFNELPPVYFKRGSAYLNVALYKNELCR 352 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 I + L E+ I GH D + N ++SL RA + L K G+ RI + Sbjct: 353 IVQTLKKYPELKVILSGHADHT---GNPDINQKISLQRAEALAAYLEKKGIDGKRI-AVK 408 Query: 314 G 314 G Sbjct: 409 G 409 >gi|60683014|ref|YP_213158.1| hypothetical protein BF3556 [Bacteroides fragilis NCTC 9343] gi|60494448|emb|CAH09244.1| putative membrane protein [Bacteroides fragilis NCTC 9343] Length = 445 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 6/121 (4%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQK 254 +++ ++ L + + I ++ F + S+ L + Sbjct: 303 KERMKREIASLNMQLQQAHTVVKEKTGSDPILGFNELPPVYFKRGSAYLNVALYKNELCR 362 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 I + L E+ I GH D + N ++SL RA + L K G+ RI + Sbjct: 363 IVQTLKKYPELKVILSGHADHT---GNPDINQKISLQRAEALAAYLEKKGIDGKRI-AVK 418 Query: 314 G 314 G Sbjct: 419 G 419 >gi|53715052|ref|YP_101044.1| putative outer membrane protein [Bacteroides fragilis YCH46] gi|52217917|dbj|BAD50510.1| putative outer membrane protein [Bacteroides fragilis YCH46] Length = 442 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 6/121 (4%) Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL-PETIVVLQK 254 +++ ++ L + + I ++ F + S+ L + Sbjct: 300 KERMKREIASLNMQLQQAHTVVKEKTGSDPILGFNELPPVYFKRGSAYLNVALYKNELCR 359 Query: 255 IGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 I + L E+ I GH D + N ++SL RA + L K G+ RI + Sbjct: 360 IVQTLKKYPELKVILSGHADHT---GNPDINQKISLQRAEALAAYLEKKGIDGKRI-AVK 415 Query: 314 G 314 G Sbjct: 416 G 416 >gi|237722141|ref|ZP_04552622.1| outer membrane porin F [Bacteroides sp. 2_2_4] gi|229447951|gb|EEO53742.1| outer membrane porin F [Bacteroides sp. 2_2_4] Length = 379 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 48/125 (38%), Gaps = 7/125 (5%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245 + +L D+ +++ L G V + +++ + F+ S Sbjct: 232 ESQLNDMRDRVN-ALKGENESLKRDLVEARNKKPEVIVKKEAGFVPRLVVVFNIGKSNIS 290 Query: 246 PETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GV 304 + ++ + + + + +V +I G+ D A N +LS RA + +++ GV Sbjct: 291 KREYMNIEAMAKGIKATDKVFTITGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFGV 348 Query: 305 SEDRI 309 ++ Sbjct: 349 PASQL 353 >gi|160944675|ref|ZP_02091902.1| hypothetical protein FAEPRAM212_02189 [Faecalibacterium prausnitzii M21/2] gi|158443859|gb|EDP20863.1| hypothetical protein FAEPRAM212_02189 [Faecalibacterium prausnitzii M21/2] Length = 246 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 26/185 (14%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 L +++ + + ++ ++ + + L + + + I+ Sbjct: 47 EAKQAELEEKEQIILNQQSQIDTIVGVRGDLIDALSKEFSGNDLSVKVDAQSGAITF--- 103 Query: 232 RNTPMFDKSSSIPLPETIVVLQKI---------GEVLAHSTEVISIRGHTDASPFRNIAR 282 +T +F + L + G+ + I I GHTD Sbjct: 104 DSTLLFGYNDDKLQDSGKTFLAEFLPKYFSVLLGKDFSPYVAEIIIEGHTDTD---GGYM 160 Query: 283 DNWRLSLDRAYSAYQV--------LMKSGVSEDR-ISKISGFAHHRLKIASDP--MNSAN 331 N +LS +RA++ L S + E R + +G + A+D A+ Sbjct: 161 YNLQLSQNRAFAVVSYCLDENNHFLSDSQLEELRVLLTANGRSWSAPIYAADGTVDMQAS 220 Query: 332 RRIDI 336 RR++I Sbjct: 221 RRVEI 225 >gi|153808398|ref|ZP_01961066.1| hypothetical protein BACCAC_02692 [Bacteroides caccae ATCC 43185] gi|149128720|gb|EDM19937.1| hypothetical protein BACCAC_02692 [Bacteroides caccae ATCC 43185] Length = 274 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 10/117 (8%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 I + + F +S+ E + + E L + I I G+ D + A N Sbjct: 166 IVVEPMKQNIFFALNSARIQDEQQQKISSLVEYLEKNPAAKICITGYADVN--TGNATIN 223 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILVED 340 ++LS RA + + L G++ DRI + + R+ I + + Sbjct: 224 FKLSEARAKNVAEALKSKGIAADRIK-VDFKGDTVQPYST-----PKENRVSICITE 274 >gi|254486102|ref|ZP_05099307.1| conserved hypothetical protein [Roseobacter sp. GAI101] gi|214042971|gb|EEB83609.1| conserved hypothetical protein [Roseobacter sp. GAI101] Length = 66 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 280 IARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHRLKIASDPMNSA--NR 332 DNW+L RA S + ++ G++ DR+ GF + D ++ NR Sbjct: 3 AFADNWKLIQARALSVVKYMINFLGIAPDRL-AAKGFGRYHPVPEGDSESARAHNR 57 >gi|237727280|ref|ZP_04557761.1| outer membrane protein 40 [Bacteroides sp. D4] gi|229434136|gb|EEO44213.1| outer membrane protein 40 [Bacteroides dorei 5_1_36/D4] Length = 408 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 57/162 (35%), Gaps = 18/162 (11%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + + + +L +KI+ + + +V V E + +L T F Sbjct: 259 EVNDQAWVDELNRKINEERNKPIPAPVVTEVKKEVVKNEML------GMTVSFIIDKYNI 312 Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302 + + + L E + + G+ D N +LS RA + +++K Sbjct: 313 TDIQKKNVAEAAKYLEDHPEVNLIVTGYADVQ--TGNPAYNLKLSQRRAEAVCNMMVKEF 370 Query: 303 GVSEDRISKISGFAHH-RLK-IASDPMNSANRRIDILVEDRQ 342 GV RI ++ + + ++ R+ + + + + Sbjct: 371 GVDPSRI-RVDYKGDSLQPYQLKNEWN-----RVVVFITEAR 406 >gi|124514981|gb|EAY56492.1| putative Outer membrane protein, OmpAfamily [Leptospirillum rubarum] Length = 521 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 5/121 (4%) Query: 199 ISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV 258 + + + G+L + + R F + +L++ + Sbjct: 51 AAEARADPPGNTPGPGMLLHQDKKLLRRIQDLSRKDLSFATGKADLNQRDRRILREDAVL 110 Query: 259 LAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH 317 L + I + GH+D N+RL LDR SA Q L G++ RI +S F Sbjct: 111 LKRYPKVEILLIGHSDER---GNQIYNFRLGLDRGKSARQFLESLGIAASRIHVVS-FGK 166 Query: 318 H 318 Sbjct: 167 R 167 >gi|327404085|ref|YP_004344923.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327319593|gb|AEA44085.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 725 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLK 321 + HTD N LS +RA + Y+ L+ + GV RI + G + Sbjct: 588 LSSHTDPR---GNDVYNQVLSENRAKACYKYLVEEKGVDPRRIIPV-GKGEREPR 638 >gi|288801265|ref|ZP_06406720.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str. F0039] gi|288331876|gb|EFC70359.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str. F0039] Length = 401 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 48/131 (36%), Gaps = 9/131 (6%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + L +I+ L N + + + + ++ + T +F + S+ P Sbjct: 256 KDAELNGKDARIADLQKALQDANNRPVAVVKEVKETTVTNL---QPTVLFRQGKSVIDPA 312 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 ++ I + + + IRG+ A N +LS RA + L+K ++ Sbjct: 313 QYAPIELIASYMRNHPTAKVEIRGYASPE---GNAEFNQKLSTARAEAVKTALVKRYKIA 369 Query: 306 EDRISKISGFA 316 R++ G Sbjct: 370 ASRLTT-KGMG 379 >gi|308448969|ref|XP_003087813.1| hypothetical protein CRE_11630 [Caenorhabditis remanei] gi|308252596|gb|EFO96548.1| hypothetical protein CRE_11630 [Caenorhabditis remanei] Length = 264 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 32/153 (20%) Query: 205 GLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP-ETIVVLQKIGEVLAHST 263 + G+ ++ +S Q + +F S + V+ KI + + + Sbjct: 123 EQCQGLMAWGINNQSATEQTALSATGQSASVLFYFDHSDKNGVKNPEVISKIADQIKQTD 182 Query: 264 EV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK 321 I + G+TD N RLS RA + +L + G+ D+I + Sbjct: 183 GNSKIFVAGYTDRL---GSFPYNQRLSAARANTVVDLLKQQGIPADQI---------QFS 230 Query: 322 IASDPM-----------------NSANRRIDIL 337 + + NRR++I Sbjct: 231 AENKTDVYQKCNGMNKKIQLVECLAPNRRVNIT 263 >gi|167579701|ref|ZP_02372575.1| cytochrome c oxidase, subunit II [Burkholderia thailandensis TXDOH] Length = 507 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 411 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELAKRRAQIV 467 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 468 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 503 >gi|257092025|ref|YP_003165666.1| membrane-bound proton-translocating pyrophosphatase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044549|gb|ACV33737.1| V-type H(+)-translocating pyrophosphatase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 806 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 15/109 (13%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ + L+ I + ++I G D N ++ +RA Sbjct: 709 VYFATGSAELPADATKTLEVIVVHAKANPGAKLAISGFHD---PSGSQAVNEEVAKNRAK 765 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIAS---DPMNSANRRIDILVE 339 + L G++E+RI + ++ + DP + RR+++ V+ Sbjct: 766 AVRDSLKNVGIAEERIEL------RKPEVTTGGGDPAEA--RRVEVSVQ 806 >gi|225024563|ref|ZP_03713755.1| hypothetical protein EIKCOROL_01438 [Eikenella corrodens ATCC 23834] gi|224942714|gb|EEG23923.1| hypothetical protein EIKCOROL_01438 [Eikenella corrodens ATCC 23834] Length = 176 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 8/114 (7%) Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---AHSTEVISIRGHTD 273 I++ ++ LPE L ++ E L + I++ GHTD Sbjct: 41 VVAAPQVERINLSADALFRFNQSDAADMLPEGKATLDRLAENLVSRQAHIDSIALTGHTD 100 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + N+ L L RA + L GV ++ + + Sbjct: 101 RL---GSEQYNYNLGLRRAQTVKNYLQDKGVQAP--ISVASAGESQPVTTACTG 149 >gi|91224838|ref|ZP_01260098.1| hypothetical protein V12G01_01555 [Vibrio alginolyticus 12G01] gi|91190384|gb|EAS76653.1| hypothetical protein V12G01_01555 [Vibrio alginolyticus 12G01] Length = 1581 Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 61/196 (31%), Gaps = 22/196 (11%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 K + NK+ + + + + + L + D + Sbjct: 532 KKAKQLVNQNKKVDKAEQGTEEVTKDYLAQIPVWKTANHIQEEKLEQALKD--ARDQSGN 589 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPL-----PETIVVLQKIGEVLAHSTE-VISIRGHT 272 ++ S F +S P + + VL + + I GH Sbjct: 590 QIDAILVNSSRGAGIKIEFAFNSREKELKDHAPIFKQLAASLANVLENEPNLRVEIEGHA 649 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK---------I 322 + N ++S +RA A ++LMK V E R+ ++ F + Sbjct: 650 CQV---GTEKANMQVSAERAEYAKKLLMKEFPVFEGRV-SVAAFGESKPVYVPKQGEKVD 705 Query: 323 ASDPMNSANRRIDILV 338 ++P NRR+ I + Sbjct: 706 RNNPNLRQNRRVVIRI 721 >gi|288958040|ref|YP_003448381.1| MotB protein [Azospirillum sp. B510] gi|288910348|dbj|BAI71837.1| MotB protein [Azospirillum sp. B510] Length = 240 Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 29/79 (36%) Query: 14 FIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFG 73 I + D W I + D +++++AFF++M+ ++ + + + + Sbjct: 5 PGIPNRAGTDDHAGQRKTLWLISFTDLISLMLAFFVLMYSMSEPEAERWTRLAKGVAQSI 64 Query: 74 KNLMTASKGIFDEQNPPER 92 + + D P Sbjct: 65 PAARSTASAPSDRPADPGA 83 Score = 40.7 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 5/160 (3%) Query: 154 GKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVK 213 K + +S +S + + DL + S L ++ + Sbjct: 57 AKGVAQSIPAARSTASAPSDRPADPGAAFNAMAVEARAAIDLDYLAALLGSQLRSNVELA 116 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 V ++I + +FD + + PE VL +G V+ I + GH + Sbjct: 117 VVDVRREDDRVVIRL---PGERIFDLTGAAFTPEGRRVLFLLGAVIGRIGNRIELVGHAE 173 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 W +L RA + L ++G D +++ Sbjct: 174 HEDSTGGVA--WERALTRAVAVSAALRETGYRRDLVARAV 211 >gi|206603884|gb|EDZ40364.1| Putative Outer membrane protein, OmpAfamily [Leptospirillum sp. Group II '5-way CG'] Length = 521 Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 5/119 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + A+ +G+L + + R F + +L++ +L Sbjct: 53 EARADPPANTPGEGMLLHQDKKLLRRIQDLSRQDLSFATGKADLNQRDRRILREDAVLLK 112 Query: 261 HSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + I + GH+D N+RL LDR SA Q L G++ RI +S F Sbjct: 113 RYPKVEILLIGHSDER---GNEIYNFRLGLDRGKSARQFLEDLGIAASRIHVVS-FGKR 167 >gi|32475799|ref|NP_868793.1| MotB-like protein [Rhodopirellula baltica SH 1] gi|32446342|emb|CAD76170.1| probable MotB homolog [Rhodopirellula baltica SH 1] gi|327540987|gb|EGF27543.1| OmpA/MotB domain protein [Rhodopirellula baltica WH47] Length = 251 Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 19/223 (8%), Positives = 63/223 (28%), Gaps = 1/223 (0%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINAT-DDDTKKAIEQYFNPFGKNLMTAS 80 + + W + + D M++L+ FF+++ ++ +++T +A+ T Sbjct: 2 DDEPEEIGIPEWVVTFGDMMSLLLTFFIMLVSLSEIKEEETYQALVDSMQQQFGYKRTLE 61 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 + P + + + ++ + R+ + Sbjct: 62 ALAPGDAKPRSMEFSVLSTTGRAKKKDTARGGVPEKAPIGEEHHVRIVRPGHMTAVGSVV 121 Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 S + L ++ + + ++ + + + ++ + Sbjct: 122 FFEVGSDLLTPASQRILEQTAQQLRGKPQRIEVRGHVSAEYAARTVGTDEAMLLAIRRAA 181 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + LV+ + F + I F S + Sbjct: 182 AVKRYLVSKQGIASDRFRVSSAEATEPITRNATITKFGNDSRV 224 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 64/206 (31%), Gaps = 21/206 (10%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL--QDLAKKISSTL 203 S ++ E + L S + + P +K + + + Sbjct: 35 SEIKEEETYQALVDSMQQQFGYKRTLEALAPGDAKPRSMEFSVLSTTGRAKKKDTARGGV 94 Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 V + + F+ S + P + +L++ + L Sbjct: 95 PEKAPIGEEHHVRIVRPGHMTAV-----GSVVFFEVGSDLLTPASQRILEQTAQQLRGKP 149 Query: 264 EVISIRGHTDAS---PFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHR 319 + I +RGH A L++ RA + + L+ K G++ DR ++S Sbjct: 150 QRIEVRGHVSAEYAARTVGTDEA-MLLAIRRAAAVKRYLVSKQGIASDRF-RVSSAEATE 207 Query: 320 LKIASDP-----MNSANRRIDILVED 340 + +S R+++ + D Sbjct: 208 PITRNATITKFGNDS---RVEVFLLD 230 >gi|260550724|ref|ZP_05824932.1| LOW QUALITY PROTEIN: small protein A [Acinetobacter sp. RUH2624] gi|260406230|gb|EEW99714.1| LOW QUALITY PROTEIN: small protein A [Acinetobacter sp. RUH2624] Length = 88 Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 12/85 (14%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + +T I + G TD N +LS RA + ++L++ G+ RI +I + Sbjct: 6 SQTTNPIIVSGFTDRL---GKFSYNQQLSSQRANTVAKLLVQQGIEASRI-QIQANSQTD 61 Query: 320 LK---IASDPMN-----SANRRIDI 336 L ++ + NRR++I Sbjct: 62 LYKQCSGNNSSQLIQCLAPNRRVNI 86 >gi|170691537|ref|ZP_02882702.1| cytochrome c oxidase, subunit II [Burkholderia graminis C4D1M] gi|170143742|gb|EDT11905.1| cytochrome c oxidase, subunit II [Burkholderia graminis C4D1M] Length = 552 Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 19/111 (17%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + FD S + ++ + ++ G TDA A N +L+ Sbjct: 447 PASVYFDTGKSTLPADAKAAVEAASAYAKAHPDAKFTLSGFTDA---SGSADTNAKLAKS 503 Query: 291 RAYSAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 RA + L +G++ED I I+G + + RR++I Sbjct: 504 RAEAVRDALKAAGIAEDHIILKKPETITGGGDAK--------EA--RRVEI 544 >gi|270339928|ref|ZP_06006481.2| outer membrane protein [Prevotella bergensis DSM 17361] gi|270333294|gb|EFA44080.1| outer membrane protein [Prevotella bergensis DSM 17361] Length = 376 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 8/147 (5%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + VA E T + I R F + + Sbjct: 235 ETKPEPAPEPTQEYVAPTPTPTPAPEPTPEPVAKKIEPIRRDVFFTINKYAIRAAEQSKI 294 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 +I L + + +S+ G+ DA N RL+ RA S + + G+S +RI Sbjct: 295 DEIVSFLKENPDATVSVTGYADA--GTGNNTINDRLAAQRAASVVKAIKDKGISANRIKS 352 Query: 312 ISGFAHHRLKIASDPMNSANRRIDILV 338 S A + ++ N R+ I++ Sbjct: 353 DSKGARVQPFAENN----KN-RVSIMI 374 >gi|163733012|ref|ZP_02140456.1| OmpA domain protein [Roseobacter litoralis Och 149] gi|161393547|gb|EDQ17872.1| OmpA domain protein [Roseobacter litoralis Och 149] Length = 519 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 52/165 (31%), Gaps = 12/165 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + ++ LA I++ + + + + V + S F+ Sbjct: 362 DQAPEEVPITQQGDRLANAIAAAGAEIPLSELQRIVQRLGGMKRLTTSFR-------FEA 414 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ ++ + ++ L S + A N ++L RA S + Sbjct: 415 GSARLDAQSRSNVVQLAHDLEQGRFDARQMIFVGFSDGQGSAEANMEIALSRANSVADAV 474 Query: 300 MKSGVSEDRI---SKISGFAHHRLKIASDP--MNSANRRIDILVE 339 + D + ++ F D ANRR+++ V Sbjct: 475 RTKAETADLMQIDMQVDAFGEAMPLACDDSVWGRQANRRVEVWVR 519 >gi|109900220|ref|YP_663475.1| OmpA/MotB [Pseudoalteromonas atlantica T6c] gi|109702501|gb|ABG42421.1| OmpA/MotB [Pseudoalteromonas atlantica T6c] Length = 274 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 61/223 (27%), Gaps = 12/223 (5%) Query: 104 EHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDL 163 +T +T +K +N++ ++ G ++ Sbjct: 19 APLTYAQTTPHAQTTKEKSAQSNTQNDLVGFASGALLGTAVGGPVGGVIGGIMGLFISND 78 Query: 164 EKSINKEENYFLPPLSKEK-------ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL 216 + N KE+ ++ D ++++L Sbjct: 79 MNNDNALAQAQSGLRQKEQQLVALRLAQQRMYQQENPDNHTALTASLESHNVTAHHGTEQ 138 Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDAS 275 T +T SI F S L I ++ S + I++ G+ D Sbjct: 139 QSTEQTTESHSITPIETNIQFRTGSHAVESHYHRQLDLIAALVRQSPDLQITLAGYADER 198 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + N LS RA S + L K V ++ F Sbjct: 199 ---GSSHYNQALSQQRAISVKRYLTKQHVPGAQLHT-ESFGES 237 >gi|212694744|ref|ZP_03302872.1| hypothetical protein BACDOR_04276 [Bacteroides dorei DSM 17855] gi|237710983|ref|ZP_04541464.1| outer membrane protein 40 [Bacteroides sp. 9_1_42FAA] gi|265750572|ref|ZP_06086635.1| outer membrane protein [Bacteroides sp. 3_1_33FAA] gi|212662723|gb|EEB23297.1| hypothetical protein BACDOR_04276 [Bacteroides dorei DSM 17855] gi|229454827|gb|EEO60548.1| outer membrane protein 40 [Bacteroides sp. 9_1_42FAA] gi|263237468|gb|EEZ22918.1| outer membrane protein [Bacteroides sp. 3_1_33FAA] Length = 408 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 57/162 (35%), Gaps = 18/162 (11%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + + + +L +KI+ + V +V V E + +L T F Sbjct: 259 EVNDQAWVDELNRKINEERNKPVPAPVVTEVKKEVVKNEML------GMTVSFIIDKYNI 312 Query: 245 LPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302 + + + L E + I G+ D N +LS RA + +++K Sbjct: 313 TDIQKKNVAEAAKYLEDHPEVNLIITGYADVQ--TGNPAYNLKLSQRRAEAVCNMMVKEF 370 Query: 303 GVSEDRISKISGFAHH-RLK-IASDPMNSANRRIDILVEDRQ 342 GV RI ++ + + ++ R+ + + + + Sbjct: 371 GVDPSRI-RVDYKGDSLQPYQLKNEWN-----RVVVFITEAR 406 >gi|86136815|ref|ZP_01055393.1| OmpA domain protein [Roseobacter sp. MED193] gi|85826139|gb|EAQ46336.1| OmpA domain protein [Roseobacter sp. MED193] Length = 518 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 54/165 (32%), Gaps = 12/165 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + L+ I + + + + + V T + S F+ Sbjct: 361 DQAPERISMNAQGDRLSNAILAAGPEVKLEELQRLVKRLTGFRRLTTSFR-------FEA 413 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ P ++ ++++ L + S A N ++L RA + Sbjct: 414 GSARPDAQSRSNIEQLARALETGLYDGKVLNFVGFSDGDGAASGNRAIALKRAQGVRDAV 473 Query: 300 MKSGVSED--RI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + + + R+ ++ F D NRR+++ V+ Sbjct: 474 LATAEAGSVARVDVQVDAFGEALPMACDDSDWGRQVNRRVEVWVQ 518 >gi|161505468|ref|YP_001572580.1| hypothetical protein SARI_03626 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866815|gb|ABX23438.1| hypothetical protein SARI_03626 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 275 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 9/90 (10%) Query: 236 MFDKSSSIPLPE---TIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLD 290 +F + + L KI + + SI G+ D + N +LS Sbjct: 156 LFRLNEYQLNMSDKNSQNNLDKIISFIRERGKYSSISVYGYADRQ---GTHQHNMKLSAL 212 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 RA + L+ G ED+I G Sbjct: 213 RAEYVKKYLVSKGFPEDKIFA-KGMGEAVP 241 >gi|126662222|ref|ZP_01733221.1| outer membrane protein, OmpA/MotB family [Flavobacteria bacterium BAL38] gi|126625601|gb|EAZ96290.1| outer membrane protein, OmpA/MotB family [Flavobacteria bacterium BAL38] Length = 444 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 6/107 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + P + L I L E + RG D + + N L+ RA Sbjct: 340 NIFFDTNKDTPNTASTNNLYYIINFLKKHPEAKVRARGFADTT---GDEKKNEELAQKRA 396 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASD-PMNSANRRIDILV 338 ++ + ++KSG+S DRI +I G S RR+ + Sbjct: 397 MNSKEFIVKSGISADRI-EILGSGEDASMDTSSKTGRQLARRVSFEL 442 >gi|182436312|ref|YP_001824031.1| putative secreted protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464828|dbj|BAG19348.1| putative secreted protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 219 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 6/79 (7%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + + + G TD A LS RA + + VL K + +I G+ Sbjct: 137 KQNATKVRVFGFTDNL---GSAAHGDVLSKQRADAVHGVLSKE-LGATITYEIRGYGEQY 192 Query: 320 LKIASDPMNSA--NRRIDI 336 ++ NRR+++ Sbjct: 193 PIASNSNEEGRKKNRRVEV 211 >gi|312115743|ref|YP_004013339.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] gi|311220872|gb|ADP72240.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 789 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 10/94 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-----ISIRGHTDASPFRNIARDNWRLSLDR 291 F+ S P+ +LQ I + + + I GHTDA DN LS R Sbjct: 661 FEFGSWEVRPDQAPLLQGIADSVNRIVQNNPGEVFLIEGHTDAV---GTDEDNLSLSDRR 717 Query: 292 AYSAYQVLMK-SGVSEDRISKISGFAHHRLKIAS 324 A + VL + V + + G+ L + + Sbjct: 718 AQAVADVLTQYYQVPRENLVT-QGYGEQFLLVPT 750 >gi|327479120|gb|AEA82430.1| outer membrane protein [Pseudomonas stutzeri DSM 4166] Length = 187 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 6/82 (7%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 V+++ GHTD N ++ + RA ++L G+ + ++ Sbjct: 110 RRDYPVVTVIGHTDTL---GHRAANEQVGMRRAQRMAELLRARGLEAMEL-RVESHGERN 165 Query: 320 LKI--ASDPMNSANRRIDILVE 339 L + NRR+++LV Sbjct: 166 LLVATPDATAEPRNRRVEVLVR 187 >gi|238023265|ref|ZP_04603691.1| hypothetical protein GCWU000324_03192 [Kingella oralis ATCC 51147] gi|237865648|gb|EEP66788.1| hypothetical protein GCWU000324_03192 [Kingella oralis ATCC 51147] Length = 176 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 8/114 (7%) Query: 217 FETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTD 273 I++ ++ LPE L ++ E L I + GHTD Sbjct: 41 VVAEPQVERINLSADALLRFNQSDAADMLPEGKATLDRLPENLVSCQAHIDGIALTGHTD 100 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + N+ L L RA + L GV ++ + + Sbjct: 101 RL---GSEQYNYNLGLQRAQTVKNYLQGKGVQAP--ISVASAGESQPVTTACTG 149 >gi|153876506|ref|ZP_02003792.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152067030|gb|EDN66208.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 240 Score = 56.1 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 22/191 (11%), Positives = 57/191 (29%), Gaps = 25/191 (13%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + +K + + + ++ L ++ + + + Sbjct: 36 QRSKNQIEHQKNAMAEIVEVAEHSRLRLHQELLQEFISDLKRWNADILEDNTVRFNSP-- 93 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGE-------VLAHSTEVISIRGHTDASP-----FRN 279 +F + S+ P+ +L E I I GHT + Sbjct: 94 --QVLFHQGKSMLQPQFKNILDSFFPRYLAILLHYQEDIEAIRIEGHTSSDWLNADDIAT 151 Query: 280 IARDNWRLSLDRAYSAYQVL-MKSGVSED------RISKISGFAHHRLK--IASDPMNSA 330 +N LS RA + + + + + E+ ++ + +G + + Sbjct: 152 RYLNNVELSQQRALATLEYCYLLASLDENLRKWLPQVLRANGLSFAKPIFNADGSENAEQ 211 Query: 331 NRRIDILVEDR 341 +RR++ V + Sbjct: 212 SRRVEFKVVTK 222 >gi|319762300|ref|YP_004126237.1| ompa/motb domain protein [Alicycliphilus denitrificans BC] gi|330825779|ref|YP_004389082.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans K601] gi|317116861|gb|ADU99349.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC] gi|329311151|gb|AEB85566.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601] Length = 173 Score = 56.1 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 10/114 (8%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 + + F + L + + + + + G DA+ A N Sbjct: 67 VVVEGGVVKFFFASGKADLAAGASEALAEAVKGVLEGGKTAVVSGFHDAT---GDAAVNA 123 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILV 338 LS RA + L GV E+++ + ++ N+ RR+++++ Sbjct: 124 ELSKQRALAVRDALKALGVPEEKVEL------KKPEVTQGSGSNAEARRVEVML 171 >gi|186682294|ref|YP_001865490.1| OmpA/MotB domain-containing protein [Nostoc punctiforme PCC 73102] gi|186464746|gb|ACC80547.1| OmpA/MotB domain protein [Nostoc punctiforme PCC 73102] Length = 594 Score = 56.1 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 16/142 (11%) Query: 210 NIVKGVLFETTRTGILIS-IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE---- 264 L E + + +S I ++ F + ++ +P I L + + Sbjct: 451 QFQDQKLVEIELSELRLSKIKIEKEIFFFTEGTTELMPGEIDKLPNLFLSIRKCLNIAKY 510 Query: 265 -----VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAH-- 317 I I GHT+++ R N LS RA L+ G+ ++ ++ + Sbjct: 511 LGKNVQIQIIGHTNST---GTERRNRPLSQARANKILSYLISQGIKINQFQALTVSSSLT 567 Query: 318 HRLKIASDPMNSANRRIDILVE 339 + ++ S+ NRR+ V Sbjct: 568 SQPELTSESKE-FNRRVSFKVL 588 >gi|256380952|ref|YP_003104612.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827] gi|255925255|gb|ACU40766.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827] Length = 407 Score = 56.1 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 12/118 (10%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 N +F S + +P L++I + GHT A+ LS R Sbjct: 290 PNALLFQPDSDVLMPAASAALERIARRF-GPGTTARVTGHTAHR---GAAQGALALSERR 345 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLK-----IASDP---MNSANRRIDILVEDR 341 A L+ GV + ++ + G + P NR + + + Sbjct: 346 ARRVAGALVSLGVPSEALTSVRGVGYAEPVRPEVDATGQPVPGAAEQNRAVVVELTGP 403 >gi|162454212|ref|YP_001616579.1| thrombospondin-like alanine-rich exported protein [Sorangium cellulosum 'So ce 56'] gi|161164794|emb|CAN96099.1| thrombospondin-like alanine-rich exported protein [Sorangium cellulosum 'So ce 56'] Length = 674 Score = 56.1 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 25/241 (10%), Positives = 67/241 (27%), Gaps = 12/241 (4%) Query: 99 DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158 + + D ++S + + + + D++ + Sbjct: 417 NDAEDRDGFQDSDGCPDPDNDGDGILDARDTCPMGAEDVDGFKDDDGCPDPDNDIDQVPD 476 Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 S + + E+ D + T+ G + Sbjct: 477 ASDQCPLVAEDRDGFQDDDGCPERDNDEDGVADAADACPMTAETIDGTNDADGCPEPAGR 536 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASP 276 + ++ F +S+ P L I +++ +++ + + D Sbjct: 537 SLPRWSGDQVVLD-GLARFPAASARVPPALAAQLGMIAQLMRGRMPLDIVIVEAYADRQG 595 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 ++ L+ RA + ++L +G+ DRI+ +G P I++ Sbjct: 596 DQSARA--LELAGARASAVKELLATAGLPADRITAAAG----DPSAKRAPGAPQ---IEV 646 Query: 337 L 337 Sbjct: 647 T 647 >gi|319793210|ref|YP_004154850.1| v-type h(+)-translocating pyrophosphatase [Variovorax paradoxus EPS] gi|315595673|gb|ADU36739.1| V-type H(+)-translocating pyrophosphatase [Variovorax paradoxus EPS] Length = 839 Score = 56.1 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 9/104 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F +SS P L + + + S + + G+ DA A N L+ RA + Sbjct: 745 FASASSEVAPNAKEALADVIKAV-QSGSTVLVSGYHDA---SGDAAKNAELAKQRAMAVS 800 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 L +G ED+I + + P + RR+++ V+ Sbjct: 801 DALKAAGAPEDKIELAK---PEQSQADGPPSEA--RRVEVKVKS 839 >gi|284038865|ref|YP_003388795.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283818158|gb|ADB39996.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 145 Score = 56.1 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 9/110 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD+SS + P L + +VL + ++ G+TD N L+ RA + Sbjct: 40 FDQSSPVLRPGVKTTLDSLAQVLVEQPALIATVTGYTD---LIGKRELNLALAEYRAKAV 96 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVEDRQ 342 L + GV +DRI + + K + N RR+ + + R+ Sbjct: 97 GSYLAQRGVRKDRIIA-NWEGPDK-KATTTGSEGVNTIGRRVVVQLLPRE 144 >gi|189461675|ref|ZP_03010460.1| hypothetical protein BACCOP_02339 [Bacteroides coprocola DSM 17136] gi|189431647|gb|EDV00632.1| hypothetical protein BACCOP_02339 [Bacteroides coprocola DSM 17136] Length = 364 Score = 56.1 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 10/108 (9%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 F +SS ++K+ E + + E +I G+ D A N RLS R Sbjct: 263 ENVFFALNSSAIRSGEKQKIEKLAEFMKNHAECKVTICGYADKQ--TGNADINMRLSKKR 320 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILV 338 A + L + G+ RI + + + R+ I + Sbjct: 321 AENVATQLKEMGIDSQRI-TVDYKGDTVQPFSTPEEN-----RVSICI 362 >gi|304411391|ref|ZP_07393005.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|307305287|ref|ZP_07585035.1| OmpA/MotB domain protein [Shewanella baltica BA175] gi|304350246|gb|EFM14650.1| OmpA/MotB domain protein [Shewanella baltica OS183] gi|306911590|gb|EFN42015.1| OmpA/MotB domain protein [Shewanella baltica BA175] Length = 276 Score = 56.1 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 76/255 (29%), Gaps = 9/255 (3%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 + P S ++ L + S+D + ++ + + + Sbjct: 16 SAPVASVSARVSLQNQAQGQERSLDNDVDASGMAMDGEYANEDEQPEALIGLGGGALVGA 75 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 G + T + + L ++ L + L + Sbjct: 76 LVGGPVGAIIGAFTGTLIGKSVSDTDTLHVQQRQINLQESQLSELSVKQQNAEK--RASE 133 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266 + + + L+S + F SS + L + EV+ S E + Sbjct: 134 YAKAQQELDELLSAQRQLLSELALGLNVQFRTGSSEVESHFLPQLDDVAEVMNLSPELNL 193 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 ++G+ D N LS R L+K GV+ +R++ F A Sbjct: 194 ELKGYADRR---GDVSYNQALSEQRLLEVRGYLIKQGVAAERMTT-QAFGALSPLQAEQD 249 Query: 327 MNSA--NRRIDILVE 339 S +RR+ + ++ Sbjct: 250 RESDVFDRRVTLTLQ 264 >gi|153000353|ref|YP_001366034.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185] gi|151364971|gb|ABS07971.1| OmpA/MotB domain protein [Shewanella baltica OS185] Length = 276 Score = 56.1 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 76/255 (29%), Gaps = 9/255 (3%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 + P S ++ L + S+D + ++ + + + Sbjct: 16 SAPVASVSARVSLQNQAQGQERSLDNDVDASGMAMDGEYANEDEQPEALIGLGGGALVGA 75 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 G + T + + L ++ L + L + Sbjct: 76 LVGGPVGAIIGAFTGTLIGKSVSDTDTLHVQQRQISLQESQLSELSVKQQAAEK--RASE 133 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266 + + + L+S + F SS + L + EV+ S E + Sbjct: 134 YAKAQQELDELLSAQRQLLSELALGLNVQFRTGSSEVESHFLPQLDDVAEVMNLSPELNL 193 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 ++G+ D N LS R L+K GV+ +R++ F A Sbjct: 194 ELKGYADRR---GDVSYNQALSEQRLLEVRGYLIKQGVAAERMTT-QAFGALSPLQAEQD 249 Query: 327 MNSA--NRRIDILVE 339 S +RR+ + ++ Sbjct: 250 RESDVFDRRVTLTLQ 264 >gi|170728833|ref|YP_001762859.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908] gi|169814180|gb|ACA88764.1| OmpA domain protein transmembrane region-containing protein [Shewanella woodyi ATCC 51908] Length = 341 Score = 56.1 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 34/114 (29%), Gaps = 5/114 (4%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWR 286 I +F SS L ++ + S + G +D + N + Sbjct: 225 IEQSSVAVLFGFDSSSLSSTAKAKLDEVIRLSKQSDNDTILLNGQSDNQ---GDSEYNQK 281 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 LS R L +GV + + + S + RR+ I + Sbjct: 282 LSEARVQQVADYLNANGVEVQTLEQQAT-GEQNAHANSRTDRALERRVIITLTS 334 >gi|163741431|ref|ZP_02148822.1| Outer membrane protein, OmpA/MotB family [Phaeobacter gallaeciensis 2.10] gi|161385165|gb|EDQ09543.1| Outer membrane protein, OmpA/MotB family [Phaeobacter gallaeciensis 2.10] Length = 624 Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 65/222 (29%), Gaps = 12/222 (5%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 S + + + + + + + TR G + D +++ Sbjct: 384 QPGSNVTTYRFKDGSTRTVVVREDGAEVETIRARDGRVLRRTRTLTDGSSVVLFDDTQRA 443 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 N + ++ + + + + ++ + ++ Sbjct: 444 DNVVVSELPTAAPRKSAFSSDTIDADELALVLAAKEAPAVSRRFSLRQIRNIDAVRRLVP 503 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIA 281 I Q F+ S++ L +G L EV I GHTDA A Sbjct: 504 EITVQSIN--FETGSAVIRAAEAEELAALGNALRDMIAQNPQEVFLIEGHTDAV---GAA 558 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 N LS RA S L + V + + + G+ L + Sbjct: 559 PFNLALSDRRAESVALALTEYFKVPPENMV-VQGYGETDLAV 599 >gi|146280852|ref|YP_001171005.1| outer membrane protein [Pseudomonas stutzeri A1501] gi|145569057|gb|ABP78163.1| outer membrane protein [Pseudomonas stutzeri A1501] Length = 179 Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 6/82 (7%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 V+++ GHTD N ++ + RA ++L G+ + ++ Sbjct: 102 RRDYPVVTVIGHTDTL---GHRAANEQVGMRRAQRMAELLRARGLEAMEL-RVESHGERN 157 Query: 320 LKI--ASDPMNSANRRIDILVE 339 L + NRR+++LV Sbjct: 158 LLVATPDATAEPRNRRVEVLVR 179 >gi|302530640|ref|ZP_07282982.1| predicted protein [Streptomyces sp. AA4] gi|302439535|gb|EFL11351.1| predicted protein [Streptomyces sp. AA4] Length = 251 Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 22/219 (10%), Positives = 57/219 (26%), Gaps = 1/219 (0%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 Q L + R + + I + + + Sbjct: 34 QDDLAARARSALDAAGLRGGEVKFSGRQATLEGFPAEEAGRALGIVQGVDGVESAQASGG 93 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + + + + F+ ++ Sbjct: 94 AGPAQPAPSPSPEPSTAPPASPPPSSSAPPPAPPTDRDGIQAELDRRLAAAPITFEPDTA 153 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + + + +L + + R + +LS +RA + ++L++ Sbjct: 154 QLTDQGEQAARDLAPLLRDAPDNFRYRLVGRVADGPGGRSAALKLSRNRALTVIRLLIRE 213 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 V DR+ ++ + +S +RR++I VE R Sbjct: 214 DVPPDRLLAVASAGGSGTGADDNGGDS-DRRVEITVEQR 251 >gi|262066774|ref|ZP_06026386.1| putative chemotaxis protein MotB [Fusobacterium periodonticum ATCC 33693] gi|291379577|gb|EFE87095.1| putative chemotaxis protein MotB [Fusobacterium periodonticum ATCC 33693] Length = 232 Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 26/173 (15%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 K+++ ++ + +S + D +G+ + I I D+ +F+ Sbjct: 46 QELRKKEEIIEGFTGLKKNIISKIQKDFEERGIKVDLDPQTGTIKIDDK---ILFNTGEY 102 Query: 243 IPLPETIVVLQKI----------GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + PE L + E + I I GHTD N LS RA Sbjct: 103 LLKPEGKKYLNEFVPIYINLLLNDEQVKKELSQIIIEGHTDDV---GSYIYNMELSQKRA 159 Query: 293 YSAYQVLMK-----SGVSEDRISKISGFAHHRLKI----ASDPMNSANRRIDI 336 + + + G E + S I+ +K+ + + +RR++ Sbjct: 160 FEVIKYIYDEMPNFKGKEELK-SYITANGRSNIKVLRDESGNIDRDKSRRVEF 211 >gi|46251334|gb|AAS84615.1| outer membrane protein [Helicobacter pylori] Length = 147 Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 4/90 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD L +I + + + + G+TD + N L + R S Sbjct: 61 FDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF---GSSEYNQALGVKRTLSVK 117 Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDP 326 L+ GV +D I IS F + K Sbjct: 118 NALVIKGVEKDMIKTIS-FGETKPKCTQKT 146 >gi|300773376|ref|ZP_07083245.1| major outer membrane protein OmpA [Sphingobacterium spiritivorum ATCC 33861] gi|300759547|gb|EFK56374.1| major outer membrane protein OmpA [Sphingobacterium spiritivorum ATCC 33861] Length = 394 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 51/134 (38%), Gaps = 7/134 (5%) Query: 188 RKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 ++ L L ++++ + ++ + + T + +I+ F SS Sbjct: 243 DEEELNALRRRVNELAANNDALSKQLEEAGNKSMTNVIVNKNILAAPILVTFKIGSSEIS 302 Query: 246 PETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302 ET V L +V+ + I G+ D + N RLS+ RA + +L+ Sbjct: 303 NETRVNLGFFAKVIKEGDQQVVYRITGYAD--KGTGTSEINQRLSMARAEAVKNILVNEF 360 Query: 303 GVSEDRISKISGFA 316 V +++ ++ Sbjct: 361 AVPARQLATVAAGG 374 >gi|260909461|ref|ZP_05916166.1| immunoreactive antigen PG33 [Prevotella sp. oral taxon 472 str. F0295] gi|260636428|gb|EEX54413.1| immunoreactive antigen PG33 [Prevotella sp. oral taxon 472 str. F0295] Length = 174 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 24/173 (13%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 ++ + L+ + A RL+++ + + + + V Sbjct: 24 ALKALSQAQMDALNAQLNDAASENARLKNMLANQQPAETKTIREFVTTPVSVFFNINKTN 83 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + +V +Q + + + I++ G+ D+ A N Sbjct: 84 I-----------------ASQKDLVNVQAVAKYAKENNSNINVVGYADS--ATGSANVNQ 124 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 LS RA + L+K GVS DRIS + G + S NRR + + Sbjct: 125 VLSDKRAETVANELVKMGVSRDRISTV-GKGG----VDDLSPISFNRRATVQI 172 >gi|288929630|ref|ZP_06423474.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329135|gb|EFC67722.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str. F0108] Length = 404 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 30/176 (17%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 ++ + L+ + A RL+++ + + + + V Sbjct: 254 ALKALSQAQMDALNAQLNDAASENARLKNMLANQQPAETKTIKEFVTTPVSVFFNINKTN 313 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + +V +Q + + + I++ G+ D+ N Sbjct: 314 I-----------------ASQKDLVNVQAVAKYAKENNSNINVVGYADS--ATGSVNRNQ 354 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFA---HHRLKIASDPMNSANRRIDILV 338 LS RA L+K G+S D+IS + G S NRR + + Sbjct: 355 YLSDKRAEMVANELVKMGISRDKISTV-GKGGVDDLSPI-------SFNRRATVQI 402 >gi|217973615|ref|YP_002358366.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223] gi|217498750|gb|ACK46943.1| OmpA/MotB domain protein [Shewanella baltica OS223] Length = 276 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 61/163 (37%), Gaps = 7/163 (4%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 +++ ++++ + + K+ ++ + + + L+S + F Sbjct: 106 QQRQISLQESQLSELSVKQQAAEKRASEYAKAQQELDELLSAQRQLLSELALGLNVQFRT 165 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 SS + L + EV+ S E + ++G+ D N LS R Sbjct: 166 GSSEVESHFLPQLDDVAEVMNLSPELNLELKGYADRR---GDVSYNQALSEQRLLEVRGY 222 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+K GV+ +R++ F A S +RR+ + ++ Sbjct: 223 LIKQGVAAERMTT-QAFGALSPLQAEQDRESDVFDRRVTLTLQ 264 >gi|325522834|gb|EGD01304.1| peptidoglycan-associated lipoprotein [Burkholderia sp. TJI49] Length = 140 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 4/76 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E +LQ+ + L + + I+G+TD + N L RA + Sbjct: 68 FDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDER---GTSEYNLALGQKRAEAV 124 Query: 296 YQVLMKSGVSEDRISK 311 + + GV++ ++ Sbjct: 125 RRAMSLLGVNDSQMEA 140 >gi|298384145|ref|ZP_06993706.1| outer membrane protein [Bacteroides sp. 1_1_14] gi|298263749|gb|EFI06612.1| outer membrane protein [Bacteroides sp. 1_1_14] Length = 363 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 3/109 (2%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 +V + V+ + + + + + F +S++ + + + + Sbjct: 233 EPIVEQPKPQPVVKQPEPEPVAVVVEPMKQNIFFALNSALLQEDQQSKIDAMVAYMEKYP 292 Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++I G+ D R N LS RA L G++ DRI Sbjct: 293 ASKVAITGYADKE--TGNPRINMTLSEKRAKIVADALKAKGIAADRIVT 339 >gi|319942877|ref|ZP_08017160.1| cytochrome c oxidase, subunit II [Lautropia mirabilis ATCC 51599] gi|319743419|gb|EFV95823.1| cytochrome c oxidase, subunit II [Lautropia mirabilis ATCC 51599] Length = 205 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 19/108 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ +S+ + + + E L + + G+ D + N L+ RA Sbjct: 109 FESASATLPADAQKAIATVVEALKAAEGRRVLLAGYHDPT---GNIDFNRDLAKRRALGV 165 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDILV 338 L+ G+ RI + +G ++ RR++IL+ Sbjct: 166 RDALIAQGIPAQRIILRKPEQTTGSG-------NNAEA---RRVEILL 203 >gi|304395571|ref|ZP_07377454.1| OmpA/MotB domain protein [Pantoea sp. aB] gi|304356865|gb|EFM21229.1| OmpA/MotB domain protein [Pantoea sp. aB] Length = 235 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 49/182 (26%), Gaps = 27/182 (14%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 K K +A+ ++ Q L + S D + + D + Sbjct: 47 EKEKIKEVAVAYEQAQQQLYNALEIEFSK---DLPSWDAEIDKQTLEVRFKSPD----VL 99 Query: 237 FDKSSSIPLPETIVVLQKIG-------EVLAHSTEVISIRGHTDASPFRNI-----ARDN 284 F SS P+ +L + + I GHT +N Sbjct: 100 FGLGSSELKPKFKEILNDFFPRYLRVLDQYKQHITEVRIEGHTSTDWTGAANQDVAYFNN 159 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRI------SKISGFAHHRLKIASDPMNSAN--RRIDI 336 LS R + Q + SE G++ + + N RR+ Sbjct: 160 MELSQGRTRAVLQYVYSLKESETHQKWVKSKFAAVGYSSSHPILDAAEKEDPNRSRRVTF 219 Query: 337 LV 338 V Sbjct: 220 KV 221 >gi|303236743|ref|ZP_07323322.1| OmpA family protein [Prevotella disiens FB035-09AN] gi|302482911|gb|EFL45927.1| OmpA family protein [Prevotella disiens FB035-09AN] Length = 381 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 65/162 (40%), Gaps = 11/162 (6%) Query: 182 KILAMKRKKRLQDLAKKI--SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + L L ++ + + + D + ET + +I + F+ Sbjct: 228 DAINAQHQAALDALNARLRDAEAENARLRDALANQKPTETVSQSVK-ELITTPISVFFNI 286 Query: 240 SSSIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + + +V +Q + + + + + G+ D+ A+ N LS RA + Sbjct: 287 DKTNIASKKDLVNVQALAKYAIDNNNNLLVTGYADS--ATGSAKHNQWLSEQRAKTVAGE 344 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 L+K GVS D+I+++ G + + S NRR + V D Sbjct: 345 LVKMGVSSDKITEV-GKGG----VDTLSPISFNRRATVQVTD 381 >gi|288942645|ref|YP_003444885.1| hypothetical protein Alvin_2951 [Allochromatium vinosum DSM 180] gi|288898017|gb|ADC63853.1| conserved hypothetical protein [Allochromatium vinosum DSM 180] Length = 243 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 32/174 (18%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + + I + L D++ + +++ + +FD++S+ PE + Sbjct: 63 AAESRQAIYTALEREFRDDLPRW---NAELVERTLTLRFREPDILFDRNSARIKPEFEAI 119 Query: 252 LQKIG-------EVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRAYSAYQVL 299 L E I + GHT + N LS R + + Sbjct: 120 LSDFLPRYVARLEPFRDVIREIRLEGHTSSEWNAGTAPLDAYFLNMELSQQRIQAVLRF- 178 Query: 300 MKSGVS--------EDRISKISGFAHHRLKIASDPMNSAN----RRIDILVEDR 341 G+ R++ + G + R D N RR++ V Sbjct: 179 -AYGLDRLKGEDWFRGRVAAV-GLSSSRPV--QDAQGRENPTASRRVEFSVLTD 228 >gi|32265616|ref|NP_859648.1| hypothetical protein HH0117 [Helicobacter hepaticus ATCC 51449] gi|32261664|gb|AAP76714.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 238 Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 24/195 (12%), Positives = 56/195 (28%), Gaps = 24/195 (12%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 I ++ L +++ + + + + L + K + + Sbjct: 30 ITQKTQEDLKIHNQKLLELNQAMSEIAKNYSNLQQELYEALLKEFSKDLKRWDAQIDEDN 89 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV---------LAHSTEVISIRGHTDASPF 277 +I +FD ++ +L + E + I GHT S + Sbjct: 90 TIRFNEPEVLFDTGAAQVKKRFQDILNDFFPRYVKILSLPKFQDNIEEVRIEGHTSQSWY 149 Query: 278 RN-----IARDNWRLSLDRAYSAYQVLMKSGVSED------RISKISGFAHHRLKIASDP 326 N LS RA + + ++ + +G + + D Sbjct: 150 VAHTLEERYLGNAELSQARALEVLKYCFNLKSINNYKEWLIKVFRANGLSFAKPLEDDD- 208 Query: 327 MNSANRRIDILVEDR 341 +RR++ V + Sbjct: 209 ---KSRRVEFRVVTK 220 >gi|269102040|ref|ZP_06154737.1| outer membrane protein A precursor [Photobacterium damselae subsp. damselae CIP 102761] gi|268161938|gb|EEZ40434.1| outer membrane protein A precursor [Photobacterium damselae subsp. damselae CIP 102761] Length = 339 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 9/104 (8%) Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + L ++ + + EV I G TDA N ++S RA + Sbjct: 241 GQTKLNDYGRYNLNEVVATMNANPEVTAQIVGRTDAV---GSKAINEKVSNARAQGVAEY 297 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVE 339 L +G+ R+ +S A++ +A + + N R + I+++ Sbjct: 298 LEANGIDASRL-TVSSVANNDPLVAGNSNGA-NLIERSVQIILK 339 >gi|167950567|ref|ZP_02537641.1| Cobyrinic acid ac-diamide synthase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 202 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 20/46 (43%), Gaps = 3/46 (6%) Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 ++ + GV R++ I GF + + NRR+ +++ Sbjct: 1 MVDLISRLGVEPKRLAAI-GFGEYHPIADNTSEAGRQKNRRVTLVI 45 >gi|255535771|ref|YP_003096142.1| OmpA/MotB [Flavobacteriaceae bacterium 3519-10] gi|255341967|gb|ACU08080.1| OmpA/MotB [Flavobacteriaceae bacterium 3519-10] Length = 427 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 12/106 (11%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + F+ +S+ PE+ L I +LA + I I ++D + N LS Sbjct: 322 NFDNLSFEFNSTKLTPESQTQLDNIKAILAAYPDAKIKIGAYSDK---KGDDAANKTLSR 378 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---ASDPMNSANR 332 RA + L + ++ G+ R + ASD +R Sbjct: 379 QRADAVKSAL-----ASAQVISAEGYGEERATVAETASDEEREKDR 419 >gi|160874991|ref|YP_001554307.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195] gi|160860513|gb|ABX49047.1| OmpA/MotB domain protein [Shewanella baltica OS195] gi|315267223|gb|ADT94076.1| OmpA/MotB domain protein [Shewanella baltica OS678] Length = 276 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 76/255 (29%), Gaps = 9/255 (3%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 + P S ++ L + S+D + ++ + + + Sbjct: 16 SAPVASVSARVSLQNQAQGQERSLDNDVDASGMAMDGEYANEDEQPEALIGLGGGALVGA 75 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 G + T + + L ++ L + L + Sbjct: 76 LVGGPVGAIIGAFTGTLIGKSVSDTDTLHVQQRQINLQESQLSELSVKQQAAEK--RASE 133 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266 + + + L+S + F SS + L + EV+ S E + Sbjct: 134 YAKAQQELDELLSAQRQLLSELALGLNVQFRTGSSEVESHFLPQLDDVAEVMNLSPELNL 193 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 ++G+ D N LS R L+K GV+ +R++ F A Sbjct: 194 ELKGYADRR---GDVSYNQALSEQRLLEVRGYLIKQGVAAERMTT-QAFGALSPLQAEQD 249 Query: 327 MNSA--NRRIDILVE 339 S +RR+ + ++ Sbjct: 250 RESDVFDRRVTLTLQ 264 >gi|294669045|ref|ZP_06734131.1| putative cytochrome c oxidase, subunit II [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309037|gb|EFE50280.1| putative cytochrome c oxidase, subunit II [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 241 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 13/217 (5%) Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + ++E + Y + + + + TDLE + L + + Sbjct: 38 ETGKIEGSPTYGQAAASEVAASAVSQAAASESNEPAVITDLETGETGTADGSLFIIQEAP 97 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 L ++ K +S + VA N + I + F + Sbjct: 98 PLEVELAPSESVGDKGLSVPVDESVAQNPG---SANEAQDEARIVTANGAVKFYFATGKA 154 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 P L+ + A + I + G+ D++ A+ N LS RA++ VL+ Sbjct: 155 DVAPGAQEALKDVLVA-ALGGKKIVVSGYHDST---GNAQVNEELSKQRAFAVRTVLLGF 210 Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 GV + +I + + RR+++ VE Sbjct: 211 GVPDKQIEL------RKPSDTEAGSGAEARRVEVFVE 241 >gi|94500304|ref|ZP_01306837.1| chemotaxis protein MotB [Oceanobacter sp. RED65] gi|94427603|gb|EAT12580.1| chemotaxis protein MotB [Oceanobacter sp. RED65] Length = 242 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 33/81 (40%), Gaps = 1/81 (1%) Query: 34 KIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERS 93 + YAD MT+L A F+V++ + + + + + + + + E Sbjct: 1 MVSYADLMTLLFALFVVLYAASNINSEKFYEMRRALE-VRFSETSNVPVSEAVRQFLEAP 59 Query: 94 SQNKIDLSIDEHITKNSVDLK 114 S ++ ++D +++ + Sbjct: 60 SVEGLNQALDPEKESSTLPQR 80 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 66/214 (30%), Gaps = 19/214 (8%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + S + + R E + + +++ + + + K L Sbjct: 20 AASNINSEKFYEMRRALEVRFSETSNVPVSEAVRQFLEAPSVEGLNQALDPEKESSTLPQ 79 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI------PLPET 248 +IS + L + T I I + +F + E Sbjct: 80 RLLQISDISAALPENEY----TLSTMDQWISIEV---PMGKLFRWDNRQNRYGSRITQEG 132 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 + ++ V A E I+I + + + W+ + + Q L G+ R Sbjct: 133 AKTMVELVNVFAEGDEAINIEVFSADTL---DDDNPWQHGAMQGAAIVQYLQLEGLQPSR 189 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVED 340 + +S + ++ +D N R++ +++ Sbjct: 190 L-AVSNYGPYQPIATNDDEQGRQLNARVNFMIDR 222 >gi|281421739|ref|ZP_06252738.1| outer membrane protein [Prevotella copri DSM 18205] gi|281404234|gb|EFB34914.1| outer membrane protein [Prevotella copri DSM 18205] Length = 381 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 9/151 (5%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 K AK + E + + + R F +S P Sbjct: 236 KSYTKKAKPVEEPAPAPAPKQEYVAPKPEPKPAPVEKKVEEIRRDIFFTINSYKIAPAED 295 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSED 307 ++ + + L + E + + G+ D N R++ RA + +L K + + Sbjct: 296 AKIRGVVDFLNKNPEAKVVVTGYAD--KGTGNDVINDRIAAKRAAAVVWMLTKKYNIPSE 353 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILV 338 RI++ S A + + + N R+ I++ Sbjct: 354 RITEESKGARVQPFAEN----AEN-RVTIMI 379 >gi|257140362|ref|ZP_05588624.1| cytochrome c oxidase, subunit II [Burkholderia thailandensis E264] Length = 507 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 411 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAALAKRRAQIV 467 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 468 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 503 >gi|167617777|ref|ZP_02386408.1| cytochrome c oxidase, subunit II [Burkholderia thailandensis Bt4] Length = 517 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 421 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAALAKRRAQIV 477 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 478 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 513 >gi|83718717|ref|YP_440984.1| cytochrome c oxidase subunit II [Burkholderia thailandensis E264] gi|83652542|gb|ABC36605.1| cytochrome c oxidase, subunit II [Burkholderia thailandensis E264] Length = 525 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA Sbjct: 429 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAALAKRRAQIV 485 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 486 RDALKTAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 521 >gi|126736197|ref|ZP_01751940.1| OmpA domain protein [Roseobacter sp. CCS2] gi|126714363|gb|EBA11231.1| OmpA domain protein [Roseobacter sp. CCS2] Length = 564 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 13/112 (11%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAY 293 F + + L ++ E ++ G D+ N +LS DRA Sbjct: 457 FPTDVFVLDSKGQRDLDRLVEFMSRPENANRELIFVGFADSV---GQYVYNTQLSRDRAQ 513 Query: 294 SAYQVLMKS---G-VSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 Q + G + R+S + G + +D S NRR+++ V Sbjct: 514 QVLQQVRNHPNAGPLRSTRMSTV-GLSEAAPVSCNDDAYGRSRNRRVEVWVR 564 >gi|258649209|ref|ZP_05736678.1| putative immunoreactive antigen PG33 [Prevotella tannerae ATCC 51259] gi|260850474|gb|EEX70343.1| putative immunoreactive antigen PG33 [Prevotella tannerae ATCC 51259] Length = 389 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 13/168 (7%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS-----IIDQ 231 + ++ +++ L +N + + I + Sbjct: 226 TDWDQVPDVDALMAMNKEQMDALNAALKDQQDENARLREMLANQKPAETIEKVTTEYVVT 285 Query: 232 RNTPMFDKSSSIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + F+ +SS + +V ++++ E + I + G+ D+ A N RLS Sbjct: 286 TTSVFFNLNSSKIASRKDLVNVKEVAEYAKANNTKIRVTGYADSK--TGSASINRRLSEA 343 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 RA + L+K GVS D I + + + S NRR + + Sbjct: 344 RAAAVANELVKMGVSRDNIITEAKGG-----VDTLSPFSYNRRATVKI 386 >gi|237510234|ref|ZP_04522949.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] gi|235002439|gb|EEP51863.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] Length = 230 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 27/172 (15%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 K + + + L A ++ + + I D T +F SS P Sbjct: 45 KEYETTKRDMQLALQKEFAKDLKQW--NAEILGDMTIRFNDP--TVLFATGSSELRPRFK 100 Query: 250 VVLQKIG---------EVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRAYSA 295 VL + + + I I GHT A N LS R SA Sbjct: 101 QVLGQFFPRYVALLTSAQYKDAVKEIRIEGHTSALWTGTTDEKIAYFRNMELSQARTRSA 160 Query: 296 YQVLMKS-GVSED-----RISKISGFAHHRLKIASDPMNS---ANRRIDILV 338 + L+ V + + +G + R ++ AN+R++ + Sbjct: 161 LEYLLSLPAVQGNEKWLVQHVTANGLSSSRPLAQDSQSSASQIANQRVEFRI 212 >gi|253569743|ref|ZP_04847152.1| outer membrane protein [Bacteroides sp. 1_1_6] gi|251840124|gb|EES68206.1| outer membrane protein [Bacteroides sp. 1_1_6] Length = 363 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 3/109 (2%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 +V + V+ + + + + + F +S++ + + + + Sbjct: 233 EPVVEQPKPQPVVKQPEPEPVAVVVEPMKQNIFFALNSALLQKDQQSKIDAMVAYMEKYP 292 Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++I G+ D R N LS RA L G++ DRI Sbjct: 293 ASKVAITGYADKE--TGNPRINMTLSEKRAKIVADALKAKGIAADRIVT 339 >gi|332826497|gb|EGJ99326.1| hypothetical protein HMPREF9455_00359 [Dysgonomonas gadei ATCC BAA-286] Length = 619 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 27/123 (21%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S+ LP I L+ H+ E + I G+ D N+ LS RA Sbjct: 498 VYFDFDKSVLLPSAIQELKMWLAETDLHNIESLIIDGYADEM---GTEDYNYDLSRRRAE 554 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN------SAN--------------RR 333 Q L + G+ ++++G + P+ + N RR Sbjct: 555 VVAQWLSQQGIKAR--ARVTGKGKIF-VNSDSPLEVPFYNDNRNTSIWNHKIWMNRKARR 611 Query: 334 IDI 336 +DI Sbjct: 612 VDI 614 >gi|146342461|ref|YP_001207509.1| hypothetical protein BRADO5620 [Bradyrhizobium sp. ORS278] gi|146195267|emb|CAL79292.1| Putative outer membrane protein [Bradyrhizobium sp. ORS278] Length = 222 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 8/186 (4%) Query: 156 DLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGV 215 L ++ S ++ + + A K + + Sbjct: 10 WLIAASLPLASAPARAQEVTREDIVRQLSRFEAAPTIDLPALKQQTQERSKMRGRNEPPP 69 Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHT 272 L S+ FD + I PE+ + +I + + + I GH Sbjct: 70 SKRPPIAPELTSLPTFNVDIQFDVDTPIVRPESYQTVGRIADAMVYADLLPYTFLIVGHI 129 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSAN 331 +A N LS RA + +L + +S R+ + G +L S P N Sbjct: 130 EA---NGKRESNVILSQRRADAIRDILANTFKISVKRLQSV-GLGEEQLLDPSKPTAPIN 185 Query: 332 RRIDIL 337 ++I I+ Sbjct: 186 QQIQII 191 >gi|517110|dbj|BAA06035.1| outermembrane P6 protein homologue [Haemophilus parainfluenzae] Length = 91 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 4/83 (4%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 + + NT F E + +L L + + + G+TD N Sbjct: 10 LQQRYNTVYFGFDKFNIEGEYVQILDAHAAYLNATPASKVVVEGNTDER---GTPEYNIA 66 Query: 287 LSLDRAYSAYQVLMKSGVSEDRI 309 L RA + L GV ++ Sbjct: 67 LGQRRADAVKGFLTGKGVDAGKL 89 >gi|262198940|ref|YP_003270149.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] gi|262082287|gb|ACY18256.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365] Length = 570 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 34/243 (13%), Positives = 71/243 (29%), Gaps = 22/243 (9%) Query: 101 SIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKS 160 + + + + G ++ R + ++ + L RD D Sbjct: 335 ADADDACPDEAEDPDGFEDEDGCPDRDNDGDGTPDDTDACPTQQGPLKRDGCPVPDGDGD 394 Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 ++ + + + D + + V Sbjct: 395 GIDDERDACPAIAGVESGAGCPDGDGDSVRDRLDNCPN-EAGERDYYGCQTAQRVALSED 453 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRN 279 + + F ++ VL ++ VL E + I H Sbjct: 454 SVLLAAPVP-------FRGG--ALRERSLPVLDELAAVLTAHPELRVRIEVHVAERR--- 501 Query: 280 IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR----RID 335 A N RLS RA + L++ G+ E+R+ + +G L+ D +A R R+D Sbjct: 502 DAAANQRLSEQRAAAVRAYLLRRGLDEERV-EGAGMGESALR--GDTEAAA-RGDKARVD 557 Query: 336 ILV 338 + + Sbjct: 558 VRI 560 >gi|320324886|gb|EFW80958.1| ompA family protein [Pseudomonas syringae pv. glycinea str. B076] Length = 240 Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 79/203 (38%), Gaps = 9/203 (4%) Query: 100 LSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCK 159 + + + S D + + ++ I + ++E + L ++ Sbjct: 26 QDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVAHYAYL 85 Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVKGVLFE 218 S+ + + N L K+ +++ +L K++S ++ + + Sbjct: 86 SSRYSEIAREHSNLMLSQERLAKMDMERQRLQLALREAKLASAQQQGRWLEDQILSLATT 145 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277 T G+++++ D +FD + + K+ + L + V+ I G+TD++ Sbjct: 146 ETDRGLVMTLGD----VLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYTDST-- 199 Query: 278 RNIARDNWRLSLDRAYSAYQVLM 300 ++N +LS DRA + VLM Sbjct: 200 -GDRQENLKLSKDRAQAVADVLM 221 >gi|238023262|ref|ZP_04603688.1| hypothetical protein GCWU000324_03189 [Kingella oralis ATCC 51147] gi|237865645|gb|EEP66785.1| hypothetical protein GCWU000324_03189 [Kingella oralis ATCC 51147] Length = 178 Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 21/132 (15%) Query: 225 LISIIDQRNTPMFDKSSSIPL---PETIVVLQKIGEVL---AHSTEVISIRGHTDASPFR 278 + I+ +F + S P+ L + L + I++ GHTD Sbjct: 46 QVERINLAADALFQFNRSSVKDLLPQGRATLDDLAARLVSRQAHIDSIALVGHTDRL--- 102 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-----DPMNSA--- 330 + N+ L L RA + L + GV + + Sbjct: 103 GSEQYNYNLGLKRAETVKAYLQEKGVQDP--ISTRSAGETQPVTTDCHGTRATAALKACL 160 Query: 331 --NRRIDILVED 340 +RR+ + + Sbjct: 161 QPDRRVVVEITG 172 >gi|42527170|ref|NP_972268.1| OmpA family protein [Treponema denticola ATCC 35405] gi|41817594|gb|AAS12179.1| OmpA family protein [Treponema denticola ATCC 35405] Length = 167 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 4/146 (2%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + K+ + + V ET + ++ D T F S T +L Sbjct: 20 KSAPKQKEEKPAEPEKTQEQEVVKEETDKKANEKNMSDDYYTVYFAPQSYQIDQFTAQIL 79 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 ++IGE L + A D L RA + K + + + Sbjct: 80 KEIGEDLKAKNVKKIVIYGHSAKLDSQKDEDRIAL--QRAIAVASYFQKMKLFDANNIIV 137 Query: 313 SGFAHHRLKIASD--PMNSANRRIDI 336 G + NRR++I Sbjct: 138 EGKGASEPARSHSEITDRFKNRRVEI 163 >gi|126734277|ref|ZP_01750024.1| OmpA/MotB [Roseobacter sp. CCS2] gi|126717143|gb|EBA14007.1| OmpA/MotB [Roseobacter sp. CCS2] Length = 527 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 56/163 (34%), Gaps = 15/163 (9%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI 243 + RL+D+ + T + + + S + F+ SS+ Sbjct: 364 DRELERMRLEDMGMMLVHTAAVEPDFDGAQYSDMMQQLR----SADRLSTSFRFNTGSSV 419 Query: 244 PLPETIVVLQKIGEVLAHSTEV---ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 E+I ++++ + + + G D+ N L+ +RA + VL Sbjct: 420 LDVESIRNIEELAARMEAGEFDGLEVLLVGFADSV---GERARNTALAQNRADAVRNVLA 476 Query: 301 K--SGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVE 339 S + R+ IS + ++ NRR+++ + Sbjct: 477 DTLSRENAQRLRPIS-YGELLPLSCNEDEVGRERNRRVEVWLR 518 >gi|29347852|ref|NP_811355.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron VPI-5482] gi|253572429|ref|ZP_04849831.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6] gi|298387858|ref|ZP_06997408.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14] gi|29339754|gb|AAO77549.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron VPI-5482] gi|251837844|gb|EES65933.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6] gi|298259463|gb|EFI02337.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14] Length = 364 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 12/140 (8%) Query: 202 TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH 261 +V + + E + + + + F +S+ + + + E L + Sbjct: 232 EAEPVVVEQPKPVPVVEQPQPKKEVVVQPMKQDIFFALNSAKIQDDQKSKIDMLVEYLQN 291 Query: 262 STE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-R 319 + + + G+ D + N LS RA + L G++ DRI + + Sbjct: 292 NPAAKVKVTGYAD--VNTGNPKINKSLSEKRAGNVADALKAKGITTDRIM-VDSKGDTVQ 348 Query: 320 L-KIASDPMNSANRRIDILV 338 K + R+ I + Sbjct: 349 PYKAPEE------NRVSICI 362 >gi|332884964|gb|EGK05217.1| hypothetical protein HMPREF9456_02887 [Dysgonomonas mossii DSM 22836] Length = 389 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 48/129 (37%), Gaps = 5/129 (3%) Query: 194 DLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQ 253 ++ + + L+ + V+ + + +S N +F + V + Sbjct: 248 NMQRADMARLAQRPVEQAEPTVVVKEVIREVQVSEEPVNNVVLFGINKVKVESHQEVNVY 307 Query: 254 KIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISK 311 + + L + + + G+TD A N +LS RA + V+ K G+++DR+ Sbjct: 308 NVAKYLKENPDKKVRVIGYTDKE--TGTAVINEKLSRQRAQNVADVITGKYGINQDRVI- 364 Query: 312 ISGFAHHRL 320 + Sbjct: 365 VEWEGQTNP 373 >gi|221211146|ref|ZP_03584125.1| cytochrome c oxidase, subunit II [Burkholderia multivorans CGD1] gi|221168507|gb|EEE00975.1| cytochrome c oxidase, subunit II [Burkholderia multivorans CGD1] Length = 532 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++P + AH +++ G TD + A N L+ RA + Sbjct: 436 FETGKSALPADAKAAIAAAADYANAHPDAKLTLSGFTDKT---GSADANAELAKHRAQAV 492 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 493 RDALKAAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 528 >gi|254462635|ref|ZP_05076051.1| OmpA/MotB [Rhodobacterales bacterium HTCC2083] gi|206679224|gb|EDZ43711.1| OmpA/MotB [Rhodobacteraceae bacterium HTCC2083] Length = 517 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 51/173 (29%), Gaps = 7/173 (4%) Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 P A + ++L+ + + + + + +R Sbjct: 345 RSPSAQIVIRRAGFVDQAPEELSINKQGDRFANAISLLGTEINLTEVKRLVKVLSPMKRL 404 Query: 234 TPMFDK--SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + F SS +++ +Q++ + S + A N ++L R Sbjct: 405 STSFRFRAGSSALDAQSLSNVQQLARAIETGVYDERSVTFVGFSDGQGPADGNKTIALRR 464 Query: 292 AYSAYQVLMKSG--VSEDRI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 A S + K+ V + + F D NRR++I V Sbjct: 465 ANSVLAAVKKAAETVDLSELNISVEAFGEALPMACDDSAWGRQVNRRVEIWVR 517 >gi|198275751|ref|ZP_03208282.1| hypothetical protein BACPLE_01926 [Bacteroides plebeius DSM 17135] gi|198271380|gb|EDY95650.1| hypothetical protein BACPLE_01926 [Bacteroides plebeius DSM 17135] Length = 358 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 4/145 (2%) Query: 168 NKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS 227 + + + E L + K + + + ++ L + + V+ Sbjct: 189 EQFKGASKNISAAEMELVQSQLKSMHEENANLRKQVNTLEEEKNNRPVVTAAAPENENRL 248 Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWR 286 FD + + + V L+ ++ I G+ D A N R Sbjct: 249 ADAVEYVAFFDINKAYLSDKEAVNLEAYANLIKKYPENKFVITGYADKQ--TGTAEFNER 306 Query: 287 LSLDRAYSAYQVLM-KSGVSEDRIS 310 LS RA + Y L+ K GV +++++ Sbjct: 307 LSKLRAEAVYNTLVDKYGVDKNQLT 331 >gi|83815059|ref|YP_446342.1| OmpA domain-containing protein [Salinibacter ruber DSM 13855] gi|83756453|gb|ABC44566.1| OmpA domain protein, putative [Salinibacter ruber DSM 13855] Length = 208 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 34/126 (26%), Gaps = 8/126 (6%) Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-- 265 N+ + V + + F S+ L + + Sbjct: 66 NQNLTRQVQALRDSLRAREAGTTLQPPIYFPSGSAWIPDRGRRRLDEHAATIKDEYPNAG 125 Query: 266 ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRL 320 I+G+TD P NW LS RA + L + + +I F + Sbjct: 126 FRIQGYTDPVPIGPSLQDTYPSNWYLSAQRAAAVAHYLDTNHDIRTASL-EIEAFGPRTM 184 Query: 321 KIASDP 326 + Sbjct: 185 VGPDET 190 >gi|304393352|ref|ZP_07375280.1| outer membrane lipoprotein Omp16 [Ahrensia sp. R2A130] gi|303294359|gb|EFL88731.1| outer membrane lipoprotein Omp16 [Ahrensia sp. R2A130] Length = 174 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 + F S+ + L K L+ + GH D N L R Sbjct: 65 DRVFFTTDSTSLTGDARATLDKQATWLSRYGNYSIVVEGHADER---GTREYNLALGARR 121 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIA-SD-PMNSANRR 333 A + L+ GV+ RI IS F R +D S NRR Sbjct: 122 AAATRDYLVARGVNRGRIRTIS-FGKERPVAVCNDISCFSQNRR 164 >gi|221199935|ref|ZP_03572978.1| cytochrome c oxidase, subunit II [Burkholderia multivorans CGD2M] gi|221207396|ref|ZP_03580405.1| cytochrome c oxidase, subunit II [Burkholderia multivorans CGD2] gi|221172599|gb|EEE05037.1| cytochrome c oxidase, subunit II [Burkholderia multivorans CGD2] gi|221180174|gb|EEE12578.1| cytochrome c oxidase, subunit II [Burkholderia multivorans CGD2M] Length = 524 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++P + AH +++ G TD + A N L+ RA + Sbjct: 428 FETGKSALPADAKAAIAAAADYANAHPDAKLTLSGFTDKT---GSADANAELAKHRAQAV 484 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 485 RDALKAAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 520 >gi|29349889|ref|NP_813392.1| outer membrane protein [Bacteroides thetaiotaomicron VPI-5482] gi|29341800|gb|AAO79586.1| outer membrane protein [Bacteroides thetaiotaomicron VPI-5482] Length = 363 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 3/109 (2%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 +V + V+ + + + + + F +S++ + + + + Sbjct: 233 EPIVEQPKPQPVVKQPEPESVAVVVEPMKQNIFFALNSALLQKDQQSKIDAMVAYMEKYP 292 Query: 264 -EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 ++I G+ D R N LS RA L G++ DRI Sbjct: 293 ASKVAITGYADKE--TGNPRINMTLSEKRAKIVADALKAKGIAADRIVT 339 >gi|226944060|ref|YP_002799133.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii DJ] gi|226718987|gb|ACO78158.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii DJ] Length = 215 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 11/155 (7%) Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIV 250 ++ ++ + + E ++++ F+ L + Sbjct: 43 ESRESRAWVADHEASVREAVKGSQFEVERRGDLLVVT---APVDSSFNPDRPSMLLVATL 99 Query: 251 VLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 LA +++ GH D+ A RLS +RA S + SG+ DR Sbjct: 100 GPLSRVAKLAAQDREVAVLLLGHGDS---SGSAELTNRLSQERAQSMAAIFRMSGLHHDR 156 Query: 309 ISKISGFAHHRLKIASDPMNSA--NRRIDILVEDR 341 + G + ++ + NRR+++ + R Sbjct: 157 LM-YKGMGSDVPRSSNANKDGRSLNRRVEMYLTTR 190 >gi|229495776|ref|ZP_04389504.1| outer membrane protein 40 [Porphyromonas endodontalis ATCC 35406] gi|229317350|gb|EEN83255.1| outer membrane protein 40 [Porphyromonas endodontalis ATCC 35406] Length = 296 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 10/107 (9%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 N F +S+ + + + I I G+ D N LS RA Sbjct: 195 NVVYFRIASAKIDQNQYINIYNTARYALENNSKIYIVGYADE--ATGNPSINMTLSERRA 252 Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHH-RLKIASDPMNSANRRIDIL 337 + + L++ GVSED + ++ + ++ R+ I+ Sbjct: 253 KAVAKALVEKYGVSED-MIEVDFKGDTVQPYETNEWN-----RVVIM 293 >gi|323344217|ref|ZP_08084443.1| hypothetical protein HMPREF0663_10979 [Prevotella oralis ATCC 33269] gi|323094946|gb|EFZ37521.1| hypothetical protein HMPREF0663_10979 [Prevotella oralis ATCC 33269] Length = 406 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 +F + S+ P ++ I + + + + I+G+ N RLS +RA Sbjct: 302 VLFRQGKSVIDPAQYAPIELIAHYMRNHKDAKVEIKGYASPE---GSKEINQRLSEERAQ 358 Query: 294 SAYQVLMKS-GVSEDRISKISGFAHHR 319 + L+K ++ R++ G Sbjct: 359 AVKNALVKKYKIAASRLTT-KGMGATD 384 >gi|323343299|ref|ZP_08083526.1| major outer membrane protein OmpA family protein [Prevotella oralis ATCC 33269] gi|323095118|gb|EFZ37692.1| major outer membrane protein OmpA family protein [Prevotella oralis ATCC 33269] Length = 381 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 55/162 (33%), Gaps = 16/162 (9%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + + ++ L +++ + + + + + + F+ + Sbjct: 229 DAIKALSQAQIDALNAQLNDANAENARLKELLANQKPVEQPAAVKEFVTTPVSVFFNLNK 288 Query: 242 SIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + +V +Q + + + + G+ D+ N LS +RA + L+ Sbjct: 289 TNIASQKDLVNVQALAKYAKQKNSKVLVNGYADS--ATGKPAHNQWLSEERAKTVANELV 346 Query: 301 KSGVSEDRISKISGFA---HHRLKIASDPMNSANRR--IDIL 337 K G+S D I+ G S NRR +++ Sbjct: 347 KLGISRDNITT-KGNGGVDELSPI-------SFNRRATVEVT 380 >gi|300114482|ref|YP_003761057.1| chemotaxis protein MotB-like protein [Nitrosococcus watsonii C-113] gi|299540419|gb|ADJ28736.1| chemotaxis protein MotB-related protein [Nitrosococcus watsonii C-113] Length = 250 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 67/199 (33%), Gaps = 36/199 (18%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 L++ + + +L++ + L + + + + ++ I + +T Sbjct: 43 ELTQTQKKIEQDIDQLKNAEQARRDILHEIRDELAKRNIKILIADNDTVLRIPE--STLA 100 Query: 237 FDKSSSIPLPETI-------------------VVLQKIGEVLAHSTEVISIRGHTDASPF 277 F +S + + + + I GHTD+ P Sbjct: 101 FASNSYALPADEKVRSSVVAIGQVLHAAINRSFKPGVSEKRRFDYLDTVFIEGHTDSRPT 160 Query: 278 RNIARDNWRLSLDRAYSAYQVLMK-SGVSE----------DRISKISGFAHHRLKIASD- 325 + + NW LS RA S ++ VS D++ +SG+A R ++ Sbjct: 161 K-RIKGNWGLSTFRAISLWEYWDDVLDVSPVLTDMSNAFGDKLFSVSGYAATRRVNEAEI 219 Query: 326 --PMNSANRRIDILVEDRQ 342 NRRIDI ++ Sbjct: 220 TREDRRENRRIDIRFTVKR 238 >gi|312962647|ref|ZP_07777136.1| hypothetical protein PFWH6_4568 [Pseudomonas fluorescens WH6] gi|311283022|gb|EFQ61614.1| hypothetical protein PFWH6_4568 [Pseudomonas fluorescens WH6] Length = 437 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 25/126 (19%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-------SIRGHTDASPFRNIARDNWRL 287 +F+ + + P + + L + SI G+ D P + N L Sbjct: 311 SLFESNGAEPTALGKRKINEFRRQLRAFAKTSGLSVVEASITGYADRQPLKAKGDTNLEL 370 Query: 288 SLDRAYSAYQVL--------------MKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 S RA S Q L + GV++ R +G A S++RR Sbjct: 371 SRRRALSVSQYLGSILVPLSEDNKSIVGRGVAQTRAECPAGLAP----ADMSSCLSSDRR 426 Query: 334 IDILVE 339 ++++VE Sbjct: 427 VEVVVE 432 >gi|134297038|ref|YP_001120773.1| cytochrome c oxidase subunit II [Burkholderia vietnamiensis G4] gi|134140195|gb|ABO55938.1| cytochrome c oxidase, subunit II [Burkholderia vietnamiensis G4] Length = 528 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 19/110 (17%) Query: 233 NTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 +T F+ S +P + AH +++ G TD A N L+ R Sbjct: 428 STVYFETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDK---SGSADANAELAKRR 484 Query: 292 AYSAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 A + L +GV+ED I I+G A + + RR++I Sbjct: 485 AQAVRDALKAAGVAEDHIVLKKPETITGGADAK--------EA--RRVEI 524 >gi|296127841|ref|YP_003635093.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563] gi|296019657|gb|ADG72894.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563] Length = 371 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 15/117 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIAR---DNWRLSLDRA 292 F S + ++++ L + + GH+D PF N N LS RA Sbjct: 37 FRLGSYGFDRFNLEKVKQVAMFLQANPNTYLIVEGHSDYRPFYNETPNGTSNVMLSYYRA 96 Query: 293 YSAYQVLMKSGVS-EDRISKISGFAHHRLKIASDPMNS------ANRRIDILVEDRQ 342 + Q + + G + +DR+ + G+ + K NRR++ +V + + Sbjct: 97 LAFSQQINEYGANLKDRLIPL-GYGYTNPKY---TERDDYYDHTKNRRLEFIVVESK 149 >gi|134095750|ref|YP_001100825.1| putative OmpA family protein [Herminiimonas arsenicoxydans] gi|133739653|emb|CAL62704.1| Putative outer membrane protein OmpA [Herminiimonas arsenicoxydans] Length = 225 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 39/116 (33%), Gaps = 17/116 (14%) Query: 237 FDKSSSIPLPETIVVLQKIG-EVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSLDRAY 293 F + ++ + + +LA + +I GHTD +R N LS RA Sbjct: 112 FAFNKAVLNKAAKQQIDQKVLPILAECKGIDGITITGHTDHL---GASRSNQILSEKRAA 168 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM---------NSANRRIDILVED 340 S L GVS + G + D + NRR+ I V Sbjct: 169 SVAGYLKTKGVSTK--MNVLGAGETQGVKLCDEKLPHGKLIACLAPNRRVLIEVHG 222 >gi|326410244|gb|ADZ67308.1| TraQ protein [Brucella melitensis M28] gi|326553537|gb|ADZ88176.1| TraQ protein [Brucella melitensis M5-90] Length = 78 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 10/84 (11%) Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS----KISGFAH 317 + I++RG TD S +++ RA + Y L+ GV RI+ + +A Sbjct: 1 MPKHINVRGLTDNSCPPPGDT---QVARVRALAIYNWLINQGVPASRITISYAPVKDYAS 57 Query: 318 HRLKIASDPMNSANRRIDILVEDR 341 + P NRR+DI + + Sbjct: 58 NAPL---SPGRVLNRRVDIEILRK 78 >gi|254459885|ref|ZP_05073301.1| OmpA family protein [Rhodobacterales bacterium HTCC2083] gi|206676474|gb|EDZ40961.1| OmpA family protein [Rhodobacteraceae bacterium HTCC2083] Length = 291 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 43/158 (27%), Gaps = 7/158 (4%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 L + L K L + + ++ F Sbjct: 7 EPVALATQVASLQDNEESLAFFANAKANLMAQESCIGDLRSLTEQARVYFPAGGLTLDES 66 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 I + I + I + GH+D N RLS RA Q L +G+ Sbjct: 67 GIAQARLIAALAQDCNGVEIIVEGHSD---PSGDPAVNLRLSQKRAEQVIQRLGATGLDI 123 Query: 307 DRISKISGFAHHRL--KIASDPMNSANRRIDILVEDRQ 342 + G R S+ +RR++ +V Sbjct: 124 SNF-RAEGLGSARPSNVTGSESDAYYDRRVEFVVIQTN 160 >gi|161523636|ref|YP_001578648.1| cytochrome c oxidase subunit II [Burkholderia multivorans ATCC 17616] gi|189351595|ref|YP_001947223.1| cytochrome c oxidase subunit II [Burkholderia multivorans ATCC 17616] gi|160341065|gb|ABX14151.1| cytochrome c oxidase, subunit II [Burkholderia multivorans ATCC 17616] gi|189335617|dbj|BAG44687.1| cytochrome c oxidase subunit II [Burkholderia multivorans ATCC 17616] Length = 532 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++P + AH +++ G TD + A N L+ RA + Sbjct: 436 FETGKSALPADAKAAIAAAADYANAHPDAKLALSGFTDKT---GSADANAELAKHRAQAV 492 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 493 RDALKAAGVAEDRIILKKPETITGGADAK--------EA--RRVEI 528 >gi|29346921|ref|NP_810424.1| outer membrane protein OmpA [Bacteroides thetaiotaomicron VPI-5482] gi|253572383|ref|ZP_04849786.1| outer membrane protein OmpA [Bacteroides sp. 1_1_6] gi|29338819|gb|AAO76618.1| outer membrane protein OmpA [Bacteroides thetaiotaomicron VPI-5482] gi|251838158|gb|EES66246.1| outer membrane protein OmpA [Bacteroides sp. 1_1_6] Length = 364 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 45/122 (36%), Gaps = 5/122 (4%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 +V + V+ + ++ + + F +S++ + + + + + + Sbjct: 231 EPEPAVVEQPKPEPVVAKEPEPKPVVVVEPMKQNIFFALNSALLQNDQLAKIDAMIKYME 290 Query: 261 HST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH- 318 + +++ G+ D + N LS RA + + L G++ DRI S Sbjct: 291 KNPTSKVAVTGYADKE--TGNPKINMTLSEKRAKNVVEALKAKGIAADRIIT-SYKGDTV 347 Query: 319 RL 320 + Sbjct: 348 QP 349 >gi|330950601|gb|EGH50861.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae Cit 7] Length = 129 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 3/64 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F+ SS PE + L + L + + + G+TD N L RA + Sbjct: 68 FEYDSSDLKPEAMRSLDVHAKDLKANGARVVLEGNTDER---GTREYNMALGERRAKAVQ 124 Query: 297 QVLM 300 + L+ Sbjct: 125 RYLV 128 >gi|320329251|gb|EFW85248.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330880852|gb|EGH15001.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 240 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 9/208 (4%) Query: 95 QNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKG 154 + + + S D + + ++ I + ++E + L ++ Sbjct: 21 GGAGHQDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVA 80 Query: 155 KDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVA-DNIVK 213 S+ + + N L K+ +++ +L K++S ++ + Sbjct: 81 HYAYLSSRYSEIAREHSNLMLSQERLAKMDMERQRLQLALREAKLASAQQQGRWLEDQIL 140 Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHT 272 + T G+++++ D +FD + + K+ + L + V+ I G+T Sbjct: 141 SLATTETDRGLVMTLGD----VLFDAGHAELKSSASRTILKVVQFLQINPRRVVRIEGYT 196 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLM 300 D++ ++N +LS DRA + VLM Sbjct: 197 DST---GDRQENLKLSKDRAQAVADVLM 221 >gi|301597288|ref|ZP_07242296.1| OmpA/MotB domain protein [Acinetobacter baumannii AB059] Length = 216 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 4/66 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++ +L ++ L I GHTD+ A N +LS DRA + Sbjct: 154 FESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDS---SGDATKNLKLSQDRALAV 210 Query: 296 YQVLMK 301 L+ Sbjct: 211 KNYLIS 216 >gi|301598138|ref|ZP_07243146.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii AB059] Length = 45 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 15/46 (32%), Gaps = 3/46 (6%) Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 L+ + D +S G + + NRRI+ V Sbjct: 1 KNYLISKNIPADHLST-EGLGSSKPVADNTSAEGRKKNRRIEFTVL 45 >gi|281420786|ref|ZP_06251785.1| putative immunoreactive antigen PG32 [Prevotella copri DSM 18205] gi|281405078|gb|EFB35758.1| putative immunoreactive antigen PG32 [Prevotella copri DSM 18205] Length = 381 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 53/164 (32%), Gaps = 20/164 (12%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 + + +N + N L+ + + K+++DL ++ Sbjct: 215 PRDQNEIDGLNGQINNLRNDLNSKDSELAAKDKQIKDLQNALNECQKAPKYVKPATATNL 274 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 + T +F S + ++ I + + + + + I+G+ Sbjct: 275 QPT--------------VLFTVGKSKVERSQMPNIEMIAQYMKNHPDAKVEIKGYASPE- 319 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMK-SGVSEDRISKISGFAHHR 319 N +LS RA + +L+K +S +R+ G Sbjct: 320 --GSKELNQKLSEARANAVKNILVKTYKISANRLQA-KGMGATD 360 >gi|213025158|ref|ZP_03339605.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 69 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 6/72 (8%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIARDNWRLS 288 ++ +F+ + S PE L ++ L++ + + G TD N LS Sbjct: 1 KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRI---GSDAYNQGLS 57 Query: 289 LDRAYSAYQVLM 300 RA S L+ Sbjct: 58 EKRAQSVVDYLI 69 >gi|171059315|ref|YP_001791664.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6] gi|170776760|gb|ACB34899.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6] Length = 271 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 65/217 (29%), Gaps = 12/217 (5%) Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKIL 184 RL + Q+ ++ E + L + EN K Sbjct: 58 ARLRIDDTVGRLQGQAPDERSRAALTGEANRLLRPLMGVPGVFLHLENQAQLNEELPKRP 117 Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 + L DL ++ +G + E + F S+ Sbjct: 118 PAPPPEPLDDLLANLAPPGAGKSSARGPDLAACEKAFGAVQ-----AARAIRFKPGSAQL 172 Query: 245 LPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + V+ +I + + I GH D N RLS RA + ++ G Sbjct: 173 EQAAMPVVHQIAALAQRCSRWRVIIEGHADT---SGDPVQNERLSRRRAAAVAAAMILEG 229 Query: 304 VSEDRISKISGFAHHRLKIASDPMNS--ANRRIDILV 338 V D+I + G R AS + NRRI+ + Sbjct: 230 VPLDQIESV-GRGASRPIAASSDAQASVKNRRIEFHL 265 >gi|255692006|ref|ZP_05415681.1| outer membrane porin F [Bacteroides finegoldii DSM 17565] gi|260622419|gb|EEX45290.1| outer membrane porin F [Bacteroides finegoldii DSM 17565] Length = 380 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 46/126 (36%), Gaps = 8/126 (6%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245 + +L D+ +++ L G V + +++ + F+ S Sbjct: 232 ESQLNDMRDRVN-ALKGENESLKRDLVEARNKKPEVIVKKEAGLVPRLVVVFNIGKSNIS 290 Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-G 303 + ++ + + + + +I G+ D A N +LS RA + +++ G Sbjct: 291 KREYMNIEAMAKGIKENPGKVFTITGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFG 348 Query: 304 VSEDRI 309 V ++ Sbjct: 349 VPASQL 354 >gi|213864669|ref|ZP_03386788.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 37 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 18/36 (50%) Query: 9 QENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVL 44 + II+ K+ GSWKI YADFMT + Sbjct: 2 KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAM 37 >gi|78059712|ref|YP_366287.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383] gi|77964262|gb|ABB05643.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383] Length = 235 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 63/219 (28%), Gaps = 19/219 (8%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + S++ ++ + L + ++ + + + +++ Sbjct: 17 LAACSSASGPTFNAYAVDLADGSRAFRVECHGLFEPLSACMREAQRVCGDQPVRLLDQQQ 76 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI---PLPE 247 RL D +KI T + + T I+ + +F PE Sbjct: 77 RLSDPVQKIDDTDAMTFQCGAPPQPVVATPVPVEEKPIVLAAD-ALFAFDEGDVDAINPE 135 Query: 248 TIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 L +I L I + G+TD N LS RA L GV+ Sbjct: 136 GRAELDEIAAKLIAMPAVRHIDVAGYTDRL---GSKEYNVALSQRRAEVVKWYLTSRGVT 192 Query: 306 EDRISKISGFAHHRLKIASDPM-NSA-------NRRIDI 336 G + + + +RR++I Sbjct: 193 AA--IDARGHGKVLPGTSCEMHIRAELIRCLSPDRRVEI 229 >gi|294828486|ref|NP_714363.2| endoflagellar motor protein [Leptospira interrogans serovar Lai str. 56601] gi|293386339|gb|AAN51381.2| endoflagellar motor protein [Leptospira interrogans serovar Lai str. 56601] Length = 216 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 18/32 (56%) Query: 36 VYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 YAD +T+L+ F++M+ I+ D K + Sbjct: 2 TYADMITLLLGLFIIMYSISQVDQTKLKQVAD 33 >gi|225620698|ref|YP_002721956.1| OmpA family protein [Brachyspira hyodysenteriae WA1] gi|225215518|gb|ACN84252.1| OmpA family protein [Brachyspira hyodysenteriae WA1] Length = 213 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 11/117 (9%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARD 283 I++ +F + + ++ E L + V + HT Sbjct: 77 RGRILETTPKVIFKFVETNMPATAEMSFNQVVEFLEKNPNVNIVLEAHTSNR--GKAYPY 134 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RRIDILV 338 N+ LS+ RA + L+ G+ +R+ + S + + N RR + ++ Sbjct: 135 NYNLSVVRAKNGKAYLLAKGIPSERVIE-SPLGEALPEYPT-----QNELRRYEFVI 185 >gi|325474220|gb|EGC77408.1| OmpA family protein [Treponema denticola F0402] Length = 167 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 4/146 (2%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + K+ + + V ET + ++ D T F S T +L Sbjct: 20 KSAPKQKEEKPAEPEKTQEQEVVKEETDKKANEKNMSDDYYTVYFAPQSYQTDQFTAQIL 79 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKI 312 ++IGE L + A D L RA + K + + + Sbjct: 80 KEIGEDLKAKNVKKIVIYGHSAKLDSQKDEDRIAL--QRAIAVASYFQKMKLFDANNIIV 137 Query: 313 SGFAHHRLKIASD--PMNSANRRIDI 336 G + NRR++I Sbjct: 138 EGKGAREPARSHSEITDRFKNRRVEI 163 >gi|189466076|ref|ZP_03014861.1| hypothetical protein BACINT_02446 [Bacteroides intestinalis DSM 17393] gi|189434340|gb|EDV03325.1| hypothetical protein BACINT_02446 [Bacteroides intestinalis DSM 17393] Length = 372 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 10/110 (9%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 F+ +SS+ + + L + + +SI G+ DA N RLS +R Sbjct: 271 ENIFFNINSSVIRSSEESKIANLVAFLQKNADVKVSICGYADA--GTGTTAINLRLSKER 328 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILVED 340 A + + L G++ DRI + + ++ R+ I + + Sbjct: 329 ALAVEKALKAKGIAADRIM-VDFKGDKVQPFSTNNEN-----RVAICITE 372 >gi|124267308|ref|YP_001021312.1| membrane-bound proton-translocating pyrophosphatase [Methylibium petroleiphilum PM1] gi|124260083|gb|ABM95077.1| Inorganic diphosphatase [Methylibium petroleiphilum PM1] Length = 823 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 14/116 (12%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 I + + F +SS L + + +A + I G+ DA+ N Sbjct: 720 IKVENGVVKFYFASASSSLAGGAAEALADVVKGVAA-GKKAVISGYHDAT---GDPDKNV 775 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDILVE 339 L+ RA + L +GV+ED+I + A D + RR+++ +E Sbjct: 776 ELAKQRALAVRDALKAAGVAEDKIEL------KKPEQLNAGDAAEA--RRVEVKLE 823 >gi|325266116|ref|ZP_08132800.1| outer membrane protein A [Kingella denitrificans ATCC 33394] gi|324982346|gb|EGC17974.1| outer membrane protein A [Kingella denitrificans ATCC 33394] Length = 178 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 41/132 (31%), Gaps = 21/132 (15%) Query: 225 LISIIDQRNTPMFDKSSSIPL---PETIVVLQKIGEVL---AHSTEVISIRGHTDASPFR 278 + I+ +F + S P+ L ++ L + I++ GHTD Sbjct: 46 QVERINLAADALFQFNRSSVKDLLPQGRATLDELAARLVSRQAQIDSIALVGHTDRL--- 102 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS-----DPMNSA--- 330 + N+ L L RA + L + GV + + Sbjct: 103 GSEQYNYNLGLKRAETVKAYLQEKGVQDP--ISTRSAGETQPVTTDCHGTRATAALKACL 160 Query: 331 --NRRIDILVED 340 +RR+ + + Sbjct: 161 QPDRRVVVEITG 172 >gi|72161146|ref|YP_288803.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Thermobifida fusca YX] gi|71914878|gb|AAZ54780.1| similar to Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Thermobifida fusca YX] Length = 310 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 53/208 (25%), Gaps = 33/208 (15%) Query: 132 FYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR 191 L E ++ E T E + PP L + + Sbjct: 87 AVLFPPAAPEQDTIAVDTPEESANPATPPTTAEPQERTADADVSPPQEDAAPLPEDHRAQ 146 Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + + + + + F + + E IV Sbjct: 147 ADE---------NHEPQADPPRTITAVVH----------------FSHNGTELTYEGIVE 181 Query: 252 LQ-KIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRI 309 LQ E A + I G+ D + N ++SL R+ A L + V Sbjct: 182 LQRFAEEAAAADASWVRIDGYGDDT---GTPEANLQVSLQRSEEAAAFLQEMMPVDGVAF 238 Query: 310 SKISGFAHHRLKIASDP--MNSANRRID 335 G + + NRRI+ Sbjct: 239 ITA-GHGAANPIADNSTVEGRARNRRIE 265 >gi|315104919|gb|EFT76895.1| OmpA family protein [Propionibacterium acnes HL050PA2] Length = 284 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 8/80 (10%) Query: 230 DQRNTPMFDKSSSIPLPETIVVLQKIGEVL--AHSTEVISIRGHTDASPFRNIARDNWRL 287 D + +FD S + P + ++ + + L + I + G+TD+ A N L Sbjct: 198 DLDASVLFDLDSDVVKPAGLQIIDRTAKQLVARKVSGKIEVTGYTDS---SGSASHNLDL 254 Query: 288 SLDRAYSAYQVL---MKSGV 304 S RA S +VL + G+ Sbjct: 255 SRRRAASVAKVLGSQLSKGI 274 >gi|296131330|ref|YP_003638580.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109] gi|296023145|gb|ADG76381.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109] Length = 412 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 15/89 (16%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 V+ + GHT R+S DRA + L GV+ + + + G R Sbjct: 318 EEPAWVVRVEGHTADFGTPEGRA---RVSQDRADAVAAALRSQGVTNE-VVAV-GRGADR 372 Query: 320 LKIAS---------DPMNS-ANRRIDILV 338 + D + NRR++I + Sbjct: 373 PRADEWPAGPRGPHDTAAADVNRRVEIRL 401 >gi|281421751|ref|ZP_06252750.1| putative immunoreactive antigen PG33 [Prevotella copri DSM 18205] gi|281404246|gb|EFB34926.1| putative immunoreactive antigen PG33 [Prevotella copri DSM 18205] Length = 390 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 26/174 (14%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 +IN L L+ + A RL++L V + + V Sbjct: 240 AINALHQSELDALNAKLNDANAENDRLKNLLNNQKPVEEKAVKEYVATPVSV-------- 291 Query: 226 ISIIDQRNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 F+ S + + +V +Q + + + + + G+ D+ A N Sbjct: 292 ----------FFNIGKSKVASKKDLVNVQALAQYAKDNNAKLVVNGYADS--ATGSAAVN 339 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 ++S RA + L+K GV+++ I + + S NRR + V Sbjct: 340 QKISKARAEKVAEELVKLGVAKENIV-VKANGG----VKDLTPASYNRRATVQV 388 >gi|298385171|ref|ZP_06994730.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14] gi|298262315|gb|EFI05180.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14] Length = 365 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 46/127 (36%), Gaps = 10/127 (7%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHT 272 V+ + ++++ + F +S+ + + ++ E L + + + G+ Sbjct: 245 PVVEQPQPKKEVVTVQPMKQDIFFALNSARIQDDQKSKIDELAEYLQKNPSAKVQVTGYA 304 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSAN 331 D +R N LS RA + L G+S DRI I + + Sbjct: 305 D--VNTGNSRINKTLSDKRAVNVADALKTKGISTDRII-IDSKGDTVQPYKTPEEN---- 357 Query: 332 RRIDILV 338 R+ I + Sbjct: 358 -RVSICI 363 >gi|296126315|ref|YP_003633567.1| outer membrane protein [Brachyspira murdochii DSM 12563] gi|296018131|gb|ADG71368.1| outer membrane protein [Brachyspira murdochii DSM 12563] Length = 205 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F +++ + + +++ ++ + + G++ A N++LS RA ++ Sbjct: 86 FGFDNTVEIGSYKEAYNLVYQIIKNNPNIRIMVEGNSSKE---GPAPYNYQLSQRRADTS 142 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + ++K G R+ K + F + + NRR + ++ Sbjct: 143 FNYIIKLGSENSRLLK-NAFGEALPEYPTLKE---NRRCEFII 181 >gi|294853085|ref|ZP_06793757.1| predicted protein [Brucella sp. NVSL 07-0026] gi|294818740|gb|EFG35740.1| predicted protein [Brucella sp. NVSL 07-0026] Length = 78 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 10/84 (11%) Query: 262 STEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS----KISGFAH 317 + I++RG TD + +++ RA + Y L+ GV RI+ + +A Sbjct: 1 MPKHINVRGLTDNNCPPPGDT---QVARVRALAIYNWLINQGVPASRITISYAPVKDYAS 57 Query: 318 HRLKIASDPMNSANRRIDILVEDR 341 + P NRR+DI + + Sbjct: 58 NAPL---SPGRVLNRRVDIEILRK 78 >gi|163739583|ref|ZP_02146992.1| Outer membrane protein, OmpA/MotB family [Phaeobacter gallaeciensis BS107] gi|161387042|gb|EDQ11402.1| putative outer membrane protein [Phaeobacter gallaeciensis BS107] Length = 624 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 65/222 (29%), Gaps = 12/222 (5%) Query: 107 TKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS 166 S + + + + + + + TR G + D +++ Sbjct: 384 QPGSNVTTYKFKDGSTRTVVVREDGAEVETIRARDGRVLRRTRTLTDGSSVVLFDDTQRA 443 Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 N + ++ + + + + ++ + ++ Sbjct: 444 DNVVVSELPTAAPRKSAFSSDTIDADELALVLAAKEAPAVSRRFSLRQIRNIDAVRRLVP 503 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS-----TEVISIRGHTDASPFRNIA 281 I Q F+ S++ L +G L EV I GHTDA A Sbjct: 504 EITVQSIN--FETGSAVIRAAEAEELAALGNALRDMIAQNPQEVFLIEGHTDAV---GAA 558 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKI 322 N LS RA S L + V + + + G+ L + Sbjct: 559 PFNLGLSDRRAESVALALTEYFKVPPENMV-VQGYGETDLAV 599 >gi|282878153|ref|ZP_06286950.1| OmpA family protein [Prevotella buccalis ATCC 35310] gi|281299731|gb|EFA92103.1| OmpA family protein [Prevotella buccalis ATCC 35310] Length = 385 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 56/163 (34%), Gaps = 14/163 (8%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 + + ++ L +++ + + + + + F+ + Sbjct: 233 DAIKALSQSQIDALNAQLNDANAENARLKDMLANQKPAETPATVKEFVTTPVSVFFNINK 292 Query: 242 SIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + +V +Q + + + + + G+ D+ + N LS +RA + L+ Sbjct: 293 TNIASQKDLVNVQAVAKYAKENNSRLMVNGYADS--ATGKPKYNQWLSEERAKTVANELV 350 Query: 301 KSGVSEDRISKISGFA---HHRLKIASDPMNSANRRIDILVED 340 K GVS D IS G S NRR + V + Sbjct: 351 KMGVSRDNIST-KGNGGVDELSPI-------SFNRRATVQVSE 385 >gi|187924373|ref|YP_001896015.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] gi|187715567|gb|ACD16791.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN] Length = 240 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 232 RNTPMFDKSSSIPL---PETIVVLQKIGEVLAHSTEVISIR--GHTDASPFRNIARDNWR 286 ++ +F S P L ++ + S V S+ GHTD N+ Sbjct: 122 QSDALFAFGQSSRASILPGGAAALDQVIARIRQSRGVQSVSVVGHTDRL---GPETVNYP 178 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 LSL RA + + ++ G+ + + +G H Sbjct: 179 LSLARAQTVREYMIDHGLDGE-LIHATGVGSHN 210 >gi|330818392|ref|YP_004362097.1| Cytochrome c oxidase, subunit II [Burkholderia gladioli BSR3] gi|327370785|gb|AEA62141.1| Cytochrome c oxidase, subunit II [Burkholderia gladioli BSR3] Length = 537 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD + S +P + AH +++ G+TD + A N L+ RA + Sbjct: 441 FDTNKSDLPGDAKAAIDAAAQYASAHPDAKLALSGYTDKT---GSASANAELAKHRAQAV 497 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+EDRI I+G A + + RR++I Sbjct: 498 RDALKAAGVAEDRIVLKKPQTITGGADAK--------EA--RRVEI 533 >gi|149910430|ref|ZP_01899071.1| hypothetical protein PE36_04773 [Moritella sp. PE36] gi|149806489|gb|EDM66460.1| hypothetical protein PE36_04773 [Moritella sp. PE36] Length = 254 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 22/177 (12%), Positives = 54/177 (30%), Gaps = 16/177 (9%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 L G + + D + ++ + L D+ Sbjct: 49 AGGPIGLVLGIAAGDWINNTWDKSIESEQLTAENQQATENLLASELQNNQLLHDVLILDQ 108 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + + ++ ++ + + +F + S + L ++ + L Sbjct: 109 QLQQVSETEELNQQLILDSLQLDL-----------LFAVNQSAIDTKNQARLTQLSDYLI 157 Query: 261 HSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 + + + GH D N L+ RA + L+ GV+E+ I ++ F Sbjct: 158 DNPTMNIVLSGHAD---PSGQEELNMNLAQQRAVAVQDQLIALGVNENNI-QVQSFG 210 >gi|88798781|ref|ZP_01114364.1| ABC-type phosphate transport system, periplasmic component [Reinekea sp. MED297] gi|88778544|gb|EAR09736.1| ABC-type phosphate transport system, periplasmic component [Reinekea sp. MED297] Length = 445 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 31/277 (11%), Positives = 76/277 (27%), Gaps = 21/277 (7%) Query: 71 PFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRL--E 128 P + G +D N + + + + + + ST + L Sbjct: 182 PVSVHARDNQSGTYDTFNTLVLKRGYDLTADAARYESNDVLSATVSSTPGAIGFTSLASI 241 Query: 129 NNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKR 188 ++ IN + L L + A ++ Sbjct: 242 GEANAVAVIDGDSTPMRPQNATIATEDYPLARRLYLYEINSANAFVLDFLRFARSQAGQQ 301 Query: 189 K-KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + +++ + S + I + F ++ + Sbjct: 302 VVAQTGFVSQNLQSMPMPVSGTLPAGYTFISENSERITTNFR-------FRPGTNHLDNK 354 Query: 248 TIVVLQKIGEVLAHSTEVIS---IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 + L ++ +A + G +D N +S R + L + G+ Sbjct: 355 AMDDLDRLAAFMARPENKDRKLILIGFSDQQ---NNEFRAQLVSEARVIQVKRALAEKGI 411 Query: 305 SEDRISKISGFAHHRLKIAS-DPMNS-ANRRIDILVE 339 ++G+ H ++ DP + N+RI++ + Sbjct: 412 QSS---ALTGYGHLNPVASNVDPKYALRNQRIEVWIR 445 >gi|302340145|ref|YP_003805351.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293] gi|301637330|gb|ADK82757.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293] Length = 343 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 59/204 (28%), Gaps = 8/204 (3%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 ++ ++T + + K + ++ A + Sbjct: 143 KNTDRTVTASVSAEESRHSEESSPAATGKMTQEASETIETQQSPAKPSPQASSPPPTSPP 202 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + T + +++R F + S E L+ G L Sbjct: 203 QEQPQEQRKIAEQEPTAPVTASAFR--SVEKRAVIYFHPNDSELTAEAQTQLRVFGRQLR 260 Query: 261 HST--EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 + +SI GH + LS +RA ++ L G+ + + FA Sbjct: 261 EWNSIDAVSIEGHC---ALLGTEKGRIELSRERAENSAAFLETIGIPA-QGVSLQWFAGE 316 Query: 319 RLKIASDPMNSANRRIDILVEDRQ 342 R NRR++I + ++ Sbjct: 317 RPATRDPDKQELNRRVEISAKGKE 340 >gi|294508280|ref|YP_003572338.1| Motility protein B [Salinibacter ruber M8] gi|294344608|emb|CBH25386.1| Motility protein B [Salinibacter ruber M8] Length = 181 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 34/126 (26%), Gaps = 8/126 (6%) Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-- 265 N+ + V + + F S+ L + + Sbjct: 39 NQNLTRQVQALRDSLRAREAGTTLQPPIYFPSGSAWIPDRGRRRLDEHAATIKDEYPNAG 98 Query: 266 ISIRGHTDASPFRNI----ARDNWRLSLDRAYSAYQVL-MKSGVSEDRISKISGFAHHRL 320 I+G+TD P NW LS RA + L + + +I F + Sbjct: 99 FRIQGYTDPVPIGPSLQDTYPSNWYLSAQRAAAVAHYLDTNHDIRTASL-EIEAFGPRTM 157 Query: 321 KIASDP 326 + Sbjct: 158 VGPDET 163 >gi|320537035|ref|ZP_08037014.1| OmpA family protein [Treponema phagedenis F0421] gi|320146110|gb|EFW37747.1| OmpA family protein [Treponema phagedenis F0421] Length = 165 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 6/109 (5%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSL 289 T F + + T L I E L + + I GH+ +LSL Sbjct: 59 DGFTVYFAPDTYVIDSFTAHKLDVIAEQLKAQNITHVKITGHSAKLDTAKAEN---KLSL 115 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDI 336 RA + + G+ + ++ G + + NRR++I Sbjct: 116 QRAVAVAEYFRSIGLFDADSMELEGLGANEPAGSHAEITKRHYNRRVEI 164 >gi|319900004|ref|YP_004159732.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] gi|319415035|gb|ADV42146.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108] Length = 616 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 4/80 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS-TEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S PE++ L++ + + + G D N+RLS RA Sbjct: 500 FDFDSDALTPESVQRLERFVDEMGTYDFSELRFDGFADEI---GSDSYNYRLSERRAEQV 556 Query: 296 YQVLMKSGVSEDRISKISGF 315 L G+ + + G Sbjct: 557 ADFLRARGIDVNFNIQAHGR 576 >gi|163801589|ref|ZP_02195487.1| hypothetical protein 1103602000597_AND4_09052 [Vibrio sp. AND4] gi|159174506|gb|EDP59308.1| hypothetical protein AND4_09052 [Vibrio sp. AND4] Length = 1582 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 73/220 (33%), Gaps = 20/220 (9%) Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + + ++ D + + KE L ++ + ++ +R + Sbjct: 553 SGTNRALPAIGVIASGKEALDQYSAFSEQIQNAKEAQETLSKYAENYLSSLTFVRRFDNP 612 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKI 255 + A G+++ + + N+ F+ + + I V +K+ Sbjct: 613 EHWQKKAETVQEALGKEGNAQIFADGQGVVVRMNFKFNSAEFENEVQVLHIDYIEVCKKL 672 Query: 256 GEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR-----I 309 ++L+ + + I GH +N ++S RA + ++ E+R Sbjct: 673 CQLLSQNPDYQVAIIGHA---GPIGTHENNLKISKMRADVVKEAILAKASGEERANLESR 729 Query: 310 SKISGFAHHRLKIA-------SDPMN----SANRRIDILV 338 I +L +D + + NRR+++ + Sbjct: 730 LWIEFKGKSQLIDDIDGYDDVNDRSDNADIAVNRRVEVRL 769 >gi|59713902|ref|YP_206677.1| hypothetical protein VF_A0719 [Vibrio fischeri ES114] gi|59482150|gb|AAW87789.1| hypothetical protein VF_A0719 [Vibrio fischeri ES114] Length = 1613 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 68/205 (33%), Gaps = 20/205 (9%) Query: 153 KGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIV 212 L + + +E + + + + K D AK++S L D Sbjct: 568 DFYQLVDKQGELEKQSTKEQENFDGATTDYLQKIVMVKAEADWAKQLSDATKVLNNDGKE 627 Query: 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGH 271 + T + +I I + N+ + + + V +KI E+L + I GH Sbjct: 628 QIARIITQGSRAIIHINFKFNSSELPNTGTTLRSDIDKVCEKIAELLKTHPDYRIQIDGH 687 Query: 272 TDASPFRNIARDNWRLSLDRAYSAYQVLMKS----GVSEDRISKISGFAHHRLKIA---- 323 + N ++ DRA Q ++ +RI +S + + A Sbjct: 688 AGRI---GSDKANKTIAEDRAKQVEQAILDKAKEDNTLPERIITLS-HGNTQPISAGNAK 743 Query: 324 -------SDPMNSANRRIDILVEDR 341 D + +RR++I + Sbjct: 744 VDMSETGDDSALAEDRRVEISLLPP 768 >gi|117924306|ref|YP_864923.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1] gi|117608062|gb|ABK43517.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1] Length = 255 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 24/171 (14%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 +A + + R +I+ L + R +S N+ F+ S Sbjct: 44 AVASRDEVRQNQRKDEITKVFDALEQSAAQSNLPLVINRKEQTLSFG---NSARFELDSF 100 Query: 243 IPLPETIVVLQKIGEVL--------AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 + L+ +L + + I G+TD N RLS++RA + Sbjct: 101 YLSAQVRQQLKDFVPMLLKVRKKGEGKWLKRVHIEGYTDDI---GTYLYNVRLSMNRAQA 157 Query: 295 AYQVLMKSGVSED------RISKISGFAHHRLKIASDPMNSANRRIDILVE 339 LM++ VSE R+ I G A + +RR++I +E Sbjct: 158 VLCTLMEAEVSEAQRRELQRMIIIDGAAST----SIRSSREESRRVEIRLE 204 Score = 39.6 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Query: 18 KKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQ 67 +K++ + D W I YAD MT L+ FLV+ I+ ++ + Q Sbjct: 9 RKRLDVGDN----PFW-ISYADLMTALVMLFLVVMSISMIAVASRDEVRQ 53 >gi|294054986|ref|YP_003548644.1| OmpA/MotB domain protein [Coraliomargarita akajimensis DSM 45221] gi|293614319|gb|ADE54474.1| OmpA/MotB domain protein [Coraliomargarita akajimensis DSM 45221] Length = 191 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 38/115 (33%), Gaps = 20/115 (17%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F SS LQ+ L+ + + + I GH D + N L R+ Sbjct: 88 VYFGFDSSAIGASERGKLQQAANHLSQNPSDGLLIEGHCD---WHGTTEYNLALGDRRST 144 Query: 294 SAYQVLMKSGVSEDR--------ISKISGFAHHRLKIASDPMNSANRRIDILVED 340 SA L G+ R + SG + S +RR D+++ Sbjct: 145 SALDYLSTLGIDSSRVELLSKGSLEATSGLSKSD--------ASQDRRADLIILK 191 >gi|304384242|ref|ZP_07366653.1| possible major outer membrane protein OmpA [Prevotella marshii DSM 16973] gi|304334558|gb|EFM00840.1| possible major outer membrane protein OmpA [Prevotella marshii DSM 16973] Length = 383 Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 7/167 (4%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + + + + L L ++S + + T T + Sbjct: 222 ATWSKVPDTEAMRALSQAELDALNAQLSDANAENERLQTLLNEQKPTEETATPAAPPVTE 281 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + FD + P+ +V + + + + +++ G+ D+ A N L+ RA Sbjct: 282 VSVFFDHDDVLSSPKDLVDVAALADYAKENHAKLTVTGYADS--ATGHAEQNQTLAERRA 339 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVE 339 L+K G++++ IS ++ +L NRR + + Sbjct: 340 QCLANELIKMGIAKEDISIVAKGGVSQL-----SPAPYNRRATVQIT 381 >gi|126174068|ref|YP_001050217.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155] gi|125997273|gb|ABN61348.1| OmpA/MotB domain protein [Shewanella baltica OS155] Length = 276 Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 75/255 (29%), Gaps = 9/255 (3%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 + P S ++ L + S+D + ++ + + + Sbjct: 16 SAPVASVSARVSLQNQAQGQERSLDNDVDASGMAMDGEYANEDEQPEALIGLGGGALVGA 75 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 G + T + + L ++ L + L + Sbjct: 76 LVGGPVGAIIGAFTGTLIGKSVSDTDTLHVQQRQISLQESQLSELSVKQQAAEK--RASE 133 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VI 266 + + + L+S + F SS + L + EV+ S E + Sbjct: 134 YAKAQQDLDELLSAQRQLLSELALGLNVQFRTGSSEVESHFLPQLDDVAEVMNLSPELNL 193 Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 ++G+ D N LS R L+ GV+ +R++ F A Sbjct: 194 ELKGYADRR---GDVSYNQALSEQRLLEVRGYLIMQGVAAERMTT-QAFGALSPLQAEQD 249 Query: 327 MNSA--NRRIDILVE 339 S +RR+ + ++ Sbjct: 250 RESDVFDRRVTLTLQ 264 >gi|253567814|ref|ZP_04845225.1| outer membrane porin F [Bacteroides sp. 1_1_6] gi|298384713|ref|ZP_06994273.1| outer membrane porin F [Bacteroides sp. 1_1_14] gi|251841887|gb|EES69967.1| outer membrane porin F [Bacteroides sp. 1_1_6] gi|298262992|gb|EFI05856.1| outer membrane porin F [Bacteroides sp. 1_1_14] Length = 381 Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 48/126 (38%), Gaps = 8/126 (6%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245 + +L D+ +++S L G V + +++ + F+ S Sbjct: 233 ESQLDDMRNRLNS-LKGENESLKRDLVEARNKKPEVIVKKEGGFVPRLVVVFNIGKSNIS 291 Query: 246 PETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-G 303 + ++ + + + + E ++ G+ D A N +LS RA + +++ G Sbjct: 292 KREYMNIEAMAKGIKANPEKTFTVTGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFG 349 Query: 304 VSEDRI 309 V ++ Sbjct: 350 VPASQL 355 >gi|114562800|ref|YP_750313.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114334093|gb|ABI71475.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400] Length = 255 Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 61/192 (31%), Gaps = 26/192 (13%) Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 ++K ++ L +++ + +++ L+ +++K S L + + Sbjct: 75 EAELSVQKQQLVQQEKKLTQTNEQLMALSTKQQSLEQVSEKYYQLQSNLAEQKVNQQQTL 134 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASP 276 G+ + F S P L + +++ S E I + G+ D Sbjct: 135 NELTIGMNVQ---------FKTGLSHIEPLFEQQLDNVAYMMSLSPELTIDLTGYADRR- 184 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN----- 331 N LS R Q L+ G++ +R+ + N Sbjct: 185 --GDNDFNQALSEQRLAEVTQYLVTQGIARERLH-GQAYGSTLPMHQE-----QNFENDF 236 Query: 332 --RRIDILVEDR 341 RR+ + + Sbjct: 237 FDRRVTLKLLAP 248 >gi|297560201|ref|YP_003679175.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844649|gb|ADH66669.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 1124 Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 9/103 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAY 293 F S+ + L + E++ + + I GHTD A+ N LS RA Sbjct: 155 FGVGSAELTEQMRDDLAPVAEMIDSYGDTETPVRITGHTD---PSGNAQTNQELSERRAQ 211 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 + L + E ++ G + + + +A RR ++ Sbjct: 212 AVADHLDEVLGEEAPEMEVEGVGSEQPR---EGGAAAQRRAEV 251 >gi|116622486|ref|YP_824642.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225648|gb|ABJ84357.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 270 Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 5/180 (2%) Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 +EK L + E S E+ + + + A ++ + A + + + S ++ N Sbjct: 57 NEKIAYLDNKLNTEMSQANEQIATANQKATQAMDAAQQAQGTASRAMEETESNSAKISAN 116 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIR 269 + L + ++ F + P L I VI + Sbjct: 117 AEATNTLASGMANALNYQLVEQGDVTFAFGKADLRPADKAALDAIVAKYNSLPRGVIELA 176 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNS 329 G TD A N LS RA + + L+ V R I G P + Sbjct: 177 GFTDPI---GSANFNLALSRRRAQAVERYLVNQKV-PLRAINIVGLGKEMPPAPFAPDQA 232 >gi|300727058|ref|ZP_07060477.1| major outer membrane protein OmpA [Prevotella bryantii B14] gi|299775602|gb|EFI72193.1| major outer membrane protein OmpA [Prevotella bryantii B14] Length = 373 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 16/151 (10%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 KR+ + K + + +V + V E + F S+ Sbjct: 235 KRVVEAPKPVERIIERIVEKPVPTPVKEEKKVEALR-------KDVFFTIGSNKISATEE 287 Query: 250 VVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSED 307 ++++ + L + + +++ G+ DA A+ N +++ RA + +L K GVSE Sbjct: 288 AKIKELVDYLNENKDAKVAVTGYADA--GTGSAKINEKIAAKRAQAVVAMLRDKYGVSES 345 Query: 308 RISKISGFAHHRLKIASDPMNSANRRIDILV 338 RI+ S A+ + +D N R+ I + Sbjct: 346 RITSDSKGAYIQPFSEND----KN-RVSICI 371 >gi|206603227|gb|EDZ39707.1| Putative outer membrane protein, OmpA/MotB family [Leptospirillum sp. Group II '5-way CG'] Length = 179 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 11/103 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + S+ E +L+K +L + + I GH D N L RA +A Sbjct: 72 YGFDKSVLTSEDRRILKKDAAILNANPTVHVVIAGHADER---GTDTYNIVLGQKRAKAA 128 Query: 296 YQVLMKSGVSEDRISKISGFAH-HRLKIA-----SDPMNSANR 332 L+ G+ ++RI +S + ++ S NR Sbjct: 129 MMYLVNLGIKKNRIKIVS-YGKRTIPGYDLCSDHNEQCWSKNR 170 >gi|124516387|gb|EAY57895.1| putative outer membrane protein, OmpA/MotB family [Leptospirillum rubarum] Length = 179 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 11/103 (10%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 + S+ E +L+K +L + + I GH D N L RA +A Sbjct: 72 YGFDKSVLTSEDRRILKKDAAILNANPTVHVVIAGHADER---GTDTYNIVLGQKRAKAA 128 Query: 296 YQVLMKSGVSEDRISKISGFAH-HRLKIA-----SDPMNSANR 332 L+ G+ ++RI +S + ++ S NR Sbjct: 129 MMYLVNLGIKKNRIKIVS-YGKRTIPGYDLCSDHNEQCWSKNR 170 >gi|186475045|ref|YP_001856515.1| cytochrome c oxidase subunit II [Burkholderia phymatum STM815] gi|184191504|gb|ACC69469.1| cytochrome c oxidase, subunit II [Burkholderia phymatum STM815] Length = 557 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 19/111 (17%) Query: 232 RNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + F+ + SS+P + AH ++ G TDA+ A N +L+ Sbjct: 456 PASVYFETNKSSLPTDAKAAIEAAAAYAKAHPDAKFALSGFTDAT---GSADKNAKLAKA 512 Query: 291 RAYSAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 RA + L +G++ED I I+G A + + RR++I Sbjct: 513 RAEAVRDALKAAGIAEDHIILKKPETITGGADAK--------EA--RRVEI 553 >gi|301060006|ref|ZP_07200880.1| OmpA family protein [delta proteobacterium NaphS2] gi|300445885|gb|EFK09776.1| OmpA family protein [delta proteobacterium NaphS2] Length = 218 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 54/149 (36%), Gaps = 19/149 (12%) Query: 192 LQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV 251 + D K ++ L+ + + ++ Q F SS+ + I Sbjct: 83 MDDRKKDLTKALAPQINAG-----EVTLQVLKGNVILVTQTGETAFAPGSSVVKQDFIST 137 Query: 252 LQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS 310 +Q + ++ ++ I GH D + + L+ RA + + + G+S + Sbjct: 138 IQTVANIMKTYGKMTVDIIGHPDRTGTKTER---QTLADQRAEAVRTMFLGMGISPA-LV 193 Query: 311 KISGFAHHRLKIASDPMNSANRRIDILVE 339 + SG A+ + R+++++ Sbjct: 194 RSSGNANSQYLDG---------RVELVIT 213 >gi|258650298|ref|YP_003199454.1| OmpA/MotB domain-containing protein [Nakamurella multipartita DSM 44233] gi|258553523|gb|ACV76465.1| OmpA/MotB domain protein [Nakamurella multipartita DSM 44233] Length = 378 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 6/82 (7%) Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + IS+ G T A P + LS RA +L + GV + I+ + G Sbjct: 299 DPSTKISVEGRTAAVP-GGDPQGAIDLSTQRATEVAVLLQEVGVPGENITSVVGLGDSSP 357 Query: 321 KI--ASDPMNSANRRIDILVED 340 + ASDP NR + + Sbjct: 358 LVQPASDPE---NRSVVVTFTS 376 >gi|255605082|ref|XP_002538335.1| conserved hypothetical protein [Ricinus communis] gi|223512676|gb|EEF24048.1| conserved hypothetical protein [Ricinus communis] Length = 210 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 9/88 (10%) Query: 232 RNTPMFDKSS---SIPLPETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWR 286 + +F LP L +I + +V I++ GHTD N Sbjct: 127 ESDALFPFGKSAAYTMLPSAKAELDEIAARIRKHEQVSAIAVVGHTDRL---GPESLNGP 183 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISG 314 LSL RA + L+ G+ I + G Sbjct: 184 LSLARANTVRDYLIAHGLDGS-IIEAKG 210 >gi|163737938|ref|ZP_02145354.1| OmpA/MotB [Phaeobacter gallaeciensis BS107] gi|161388554|gb|EDQ12907.1| OmpA/MotB [Phaeobacter gallaeciensis BS107] Length = 518 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 51/166 (30%), Gaps = 14/166 (8%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + LA I++ S + + + + V + S F+ Sbjct: 361 DQAPERISMNVQGDRLANAITAAGSEVPLEELQRLVSRLDGLQRLTTSFR-------FEP 413 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ P ++ + ++ L S A N ++ RA + + Sbjct: 414 GSTRPDAQSRSNITQLARSLEAGAYDARELVFVGFSDGDGPASGNRSIAKKRAEAVRDAV 473 Query: 300 MKSGVSEDRISK----ISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + + + + I+ F D NRR+++ V Sbjct: 474 IAA-AETANLERTEIEIAAFGEALPMACEDQRWGRQVNRRVEVWVR 518 >gi|239815340|ref|YP_002944250.1| membrane-bound proton-translocating pyrophosphatase [Variovorax paradoxus S110] gi|239801917|gb|ACS18984.1| V-type H(+)-translocating pyrophosphatase [Variovorax paradoxus S110] Length = 842 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 9/115 (7%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 + + + F+ + P L + + + S V+ + G+ DA N Sbjct: 737 VKVENGVVKFYFESGKAEVAPNAKEALADVIKAV-QSGSVLLVSGYHDA---SGDPAKNA 792 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 L+ RA + L +G D+I + + + RR+++ V+ Sbjct: 793 ELAKQRAVAVGDALKAAGAPADKIELAK---PEQTQADGPASEA--RRVEVKVKA 842 >gi|330946477|gb|EGH47518.1| OmpA family protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 63 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILVE 339 LS RA + + L+KSGV+ I G + D NRR+++ V+ Sbjct: 12 LSRLRAMAVRRELLKSGVT---FRDIVGLGDEMPVATNEIDDGRIKNRRVEVWVQ 63 >gi|218440795|ref|YP_002379124.1| OmpA/MotB domain protein [Cyanothece sp. PCC 7424] gi|218173523|gb|ACK72256.1| OmpA/MotB domain protein [Cyanothece sp. PCC 7424] Length = 222 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 52/154 (33%), Gaps = 22/154 (14%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 ++ + ++ LQ + I L + + + + + N +FD+ Sbjct: 43 AQVQLLHKQDELQKYKEAIDQ-LPVKIIKALNETIPNSGIIVHPETGDVSLDNRILFDEG 101 Query: 241 SSIPLPETIVVLQKIGEV----------LAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 S+ PE LQ+ + L + I GHT + + DN LSL Sbjct: 102 SASLKPEGKQFLQQFIPIYSQHIFSNTLLDQQIIRVIIEGHTSS---KGSDSDNMELSLR 158 Query: 291 RAYSAYQVLMKSGVS-------EDRISKISGFAH 317 RA S + ++ + ++ SG Sbjct: 159 RALSVSDYIFSDEINFPTKEKFQKKLLA-SGRGE 191 >gi|226226461|ref|YP_002760567.1| hypothetical protein GAU_1055 [Gemmatimonas aurantiaca T-27] gi|226089652|dbj|BAH38097.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 531 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 33/131 (25%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDR 291 +T +F ++ L L+ I +V+ + + I GHTD N +L+ R Sbjct: 378 DTTLFSFDRAVVLKAGNDTLKVIVDVMKANPSIRISIEGHTDWY---GSEAYNNKLAKSR 434 Query: 292 AYSAYQVLMK-SGVSEDRISKISGF---------------AHHR----LKI------ASD 325 A + Y+ L+K +G D I G A+ Sbjct: 435 AEAVYKQLLKVAGTDAD---AIKGRVVWSSFGEQCILVRDGDTEQEPPPANRSRISDANR 491 Query: 326 PMNSANRRIDI 336 +ANRR++I Sbjct: 492 RAQAANRRVEI 502 >gi|163743880|ref|ZP_02151251.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10] gi|161382821|gb|EDQ07219.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10] Length = 518 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 51/166 (30%), Gaps = 14/166 (8%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + + LA I++ S + + + + V + S F+ Sbjct: 361 DQAPERISMNVQGDRLANAITAAGSEVPLEELQRLVSRLDGLQRLTTSFR-------FEP 413 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 S+ P ++ + ++ L S A N ++ RA + + Sbjct: 414 GSTRPDAQSRSNITQLARSLEAGAYDARELVFVGFSDGDGPASGNRSIAKKRAEAVRDAV 473 Query: 300 MKSGVSEDRISK----ISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + + + + I+ F D NRR+++ V Sbjct: 474 IAA-AETANLERTEIEIAAFGEALPMACEDQRWGRQVNRRVEVWVR 518 >gi|29345828|ref|NP_809331.1| outer membrane porin F [Bacteroides thetaiotaomicron VPI-5482] gi|29337721|gb|AAO75525.1| outer membrane porin F precursor [Bacteroides thetaiotaomicron VPI-5482] Length = 372 Score = 53.8 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 47/126 (37%), Gaps = 8/126 (6%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245 + +L D+ +++S L G V + +++ + F+ S Sbjct: 224 ESQLDDMRNRLNS-LKGENESLKRDLVEARNKKPEVIVKKEGGFVPRLVVVFNIGKSNIS 282 Query: 246 PETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-G 303 + ++ + + + + E + G+ D A N +LS RA + +++ G Sbjct: 283 KREYMNIEAMAKGIKANPEKTFTVTGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFG 340 Query: 304 VSEDRI 309 V ++ Sbjct: 341 VPASQL 346 >gi|298369755|ref|ZP_06981072.1| cytochrome c oxidase, subunit II [Neisseria sp. oral taxon 014 str. F0314] gi|298282312|gb|EFI23800.1| cytochrome c oxidase, subunit II [Neisseria sp. oral taxon 014 str. F0314] Length = 183 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 12/118 (10%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDN 284 + + F + V+ + E + + I G D++ A N Sbjct: 76 QVVMDGGVAKFFFATGKNDVAEGAEQVVADLIEAGKE-GKKLVISGFADST---GNAASN 131 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 LS RA + GV I + K + ++ RR+++ VE Sbjct: 132 QELSKKRAQAVQAFFEAHGVKAGNIEL------RKPKSTTGAEGNDAEGRRVEVKVEG 183 >gi|213964218|ref|ZP_03392452.1| OmpA family protein [Capnocytophaga sputigena Capno] gi|213953137|gb|EEB64485.1| OmpA family protein [Capnocytophaga sputigena Capno] Length = 346 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 84/290 (28%), Gaps = 15/290 (5%) Query: 54 INATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVD- 112 ++A K+ T S I ++ + +I T ++ Sbjct: 62 LSAVKYKQKEMPYTSAVTEESKFATKSPTIVVGTASNTAVARTATNTAIARTATNTAIAR 121 Query: 113 --LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 + + + ++ SQ + ++ K + + ++ + Sbjct: 122 NTAIPRTASTTTSRVMPRTTVAPMAVSQTRSSTTAIAQQVAQLSKSVDQLRKQQQLLLAA 181 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 K I + + +L + Sbjct: 182 LAANTGVGIATKNARATTVTPTTASQTPIVVQNVTATGVPMQISAERRSELEQLLAAYGH 241 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 ++ F + S PL + ++ +L E I + G+ N LS+ Sbjct: 242 KKAVLYFANNKSEPLTYDPTTIDEMVTMLKTHPELSILLEGYASEV---GSVAYNNVLSM 298 Query: 290 DRAYSAYQVLMKSGVSEDRI-SKISGFAHHRLKIASDPMNSANRRIDILV 338 RA + Q+L G+S +RI + G ++ P + RR+++ V Sbjct: 299 QRAVNVAQILKAKGISSERILTAFKGI---DPQVT--PAEA--RRVELRV 341 >gi|254251341|ref|ZP_04944659.1| Cytochrome c oxidase [Burkholderia dolosa AUO158] gi|124893950|gb|EAY67830.1| Cytochrome c oxidase [Burkholderia dolosa AUO158] Length = 533 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++P + AH +++ G TD + A N L+ RA + Sbjct: 437 FETGKSTLPADAKAAIAAAADYANAHPDAKLALSGFTDKT---GSADANAELAKQRAQAV 493 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+ED I I+G A + + RR++I Sbjct: 494 RDALKAAGVAEDHIVLKKPETITGGADAK--------AA--RRVEI 529 >gi|311696161|gb|ADP99034.1| OmpA/MotB domain protein [marine bacterium HP15] Length = 419 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 26/275 (9%), Positives = 74/275 (26%), Gaps = 14/275 (5%) Query: 70 NPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLEN 129 P G +D Q ++D + + + + + + + L + Sbjct: 156 RPIHLYARDDRSGTWDTFKSLVLGKQFELDSNARRYESNDQLSDDVSRDPSGIGFSGLAS 215 Query: 130 NIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRK 189 + + + + + ++ Sbjct: 216 VRKSKLLAISEGNAPALHPNQLTVASEDYPLSRRLFMYTPGSDVPPLSAGLIGFALGQQG 275 Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + L + IS + + + + + F + + + Sbjct: 276 QALVAESGFISQNPIAVKPEFDE---STPESFRRLTSNYHRLTVNFRFSEGRTKLDNKAR 332 Query: 250 VVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 LQ++ + L + + + + G D A +S RA S + L + V + Sbjct: 333 RDLQRVQQYLNQNGRSADDLLLIGFADTQSHELRA---QMISELRALSVRKALQEVNVPD 389 Query: 307 DRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +G+ + + N R+++ ++ R Sbjct: 390 ---VAYTGYGQYMPV--GGSGSPRNGRVEVWIKSR 419 >gi|114762915|ref|ZP_01442347.1| Outer membrane protein, OmpA/MotB family [Pelagibaca bermudensis HTCC2601] gi|114544525|gb|EAU47532.1| Outer membrane protein, OmpA/MotB family [Roseovarius sp. HTCC2601] Length = 674 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 65/217 (29%), Gaps = 12/217 (5%) Query: 118 TNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPP 177 + + N + + ++ R G+ + D + N Sbjct: 446 DDGSTRTVVQYENGNAVETVKAADGRVLRRIRTLPDGEQIVLFDDTQAEQQVVVNDLPQT 505 Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + + ++ + A + + + + + T ++ I F Sbjct: 506 QETPRRMNIREVDEAELAAALAAENGTDVGRTFSLNQIRNIDTVRHLVPEISVDSIN--F 563 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHST-----EVISIRGHTDASPFRNIARDNWRLSLDRA 292 + S+ P+ L +G + EV I GHTDA+ N LS RA Sbjct: 564 ETGSAAIRPQEAQALAALGNAMKRVISDNPGEVFLIEGHTDATGGWG---YNLALSDRRA 620 Query: 293 YSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN 328 S L + V + + + G+ L I + Sbjct: 621 ESVALALTEYFDVPPENMV-LQGYGESDLAIETQTSE 656 >gi|300871695|ref|YP_003786568.1| hypothetical protein BP951000_2090 [Brachyspira pilosicoli 95/1000] gi|300689396|gb|ADK32067.1| hypothetical protein BP951000_2090 [Brachyspira pilosicoli 95/1000] Length = 190 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 + ++ + GH D + N LSL RA V++ G+S R+ I +++ Sbjct: 88 NNRNAILIVEGHADEIS-KEKLDLNMMLSLQRASVIRDVIVSFGISHQRVK-IYPYSYFA 145 Query: 320 LKIASDPMNSANRRIDIL 337 K ++ NRR+D + Sbjct: 146 PKYTTNTF--QNRRVDFV 161 >gi|148257389|ref|YP_001241974.1| hypothetical protein BBta_6143 [Bradyrhizobium sp. BTAi1] gi|146409562|gb|ABQ38068.1| Putative outer membrane protein [Bradyrhizobium sp. BTAi1] Length = 222 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 8/175 (4%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 ++ + L A K + + L+ Sbjct: 21 APARSQEVTRDDIVRQLARFEAAPTLDLPALKQQTQERSKLRGRNEPPPQKRPPIAPELM 80 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARD 283 ++ FD+ + I P++ + +I + + HS I GH +A Sbjct: 81 NLPALNVDIQFDQDTPIVRPDSYQTVGRIADAMVHSELLPYTFLIVGHVEA---NGRREP 137 Query: 284 NWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 N LS RA + +L + +S R+ I G +L S P S N++I I+ Sbjct: 138 NVILSQRRADAIRDILANTFKISVKRLQSI-GLGEEQLLDPSKPTASVNQQIQII 191 >gi|325299222|ref|YP_004259139.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324318775|gb|ADY36666.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170] Length = 370 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 10/115 (8%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDN 284 + + R F +SS + + L T+ +S+ G+ D AR N Sbjct: 262 VKVQPMRQNIFFLINSSEIRTSEQSKVNNLIAYLKEHTDAKVSLCGYAD--KNTGNARIN 319 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILV 338 +LS +RA + + L G++ DRI I + + R+ I + Sbjct: 320 KKLSQERAEAVAEALKAEGIAADRI-TIDYKGDTEQPFNVIEEN-----RVTICI 368 >gi|315607966|ref|ZP_07882959.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|315250435|gb|EFU30431.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 379 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 13/134 (9%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + +L ++I+ + L N + T T + ++ +F + S+ P Sbjct: 236 KDAQLAAKDRQIADLQNALDECNKKPKYVKPATATNLQPTV-------LFRQGKSVIDPA 288 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 ++ I + + + I+G+ A N +LS RA + L+K ++ Sbjct: 289 QYAPIELIATYMKKNPTAKVEIKGYASPE---GSAELNQKLSDARAEVVKKALIKKYKIA 345 Query: 306 EDRISKISGFAHHR 319 DR++ G Sbjct: 346 ADRLTT-KGMGATD 358 >gi|288924935|ref|ZP_06418871.1| conserved hypothetical protein [Prevotella buccae D17] gi|288338125|gb|EFC76475.1| conserved hypothetical protein [Prevotella buccae D17] Length = 379 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 13/134 (9%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + +L ++I+ + L N + T T + ++ +F + S+ P Sbjct: 236 KDAQLAAKDRQIADLQNALDECNKKPKYVKPATATNLQPTV-------LFRQGKSVIDPA 288 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVS 305 ++ I + + + I+G+ A N +LS RA + L+K ++ Sbjct: 289 QYAPIELIATYMKKNPTAKVEIKGYASPE---GSAELNQKLSDARAEVVKKALIKKYKIA 345 Query: 306 EDRISKISGFAHHR 319 DR++ G Sbjct: 346 ADRLTT-KGMGATD 358 >gi|4105267|gb|AAD02332.1| flagellar motor rotation protein MotB [Campylobacter jejuni] Length = 141 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 8/104 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F++ S+ + I K L I IRG+TD S + L+ RA Sbjct: 17 FERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSIIRSY---ELAYQRAE 73 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 + + ++ G + I I + + + P N R++I Sbjct: 74 NVLKYFIEGGANLKNI-SIKSYGLNNPINGN-PQALENNRVEIY 115 >gi|289207539|ref|YP_003459605.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] gi|288943170|gb|ADC70869.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] Length = 315 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 8/107 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSL 289 R + F S + + E L + G TDA N RLS Sbjct: 176 DRWSVYFATGSRELDSRGRETVARAAETLRTVERPRVRLVGLTDAE---GPRELNERLSR 232 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDI 336 RA + L+++GV D ++ +G + + S RR+DI Sbjct: 233 QRAEAVRAALVEAGVPGDGLTVEAG--GVDPEADGEREGS--RRVDI 275 >gi|300870376|ref|YP_003785247.1| peptidoglycan-associated lipoprotein [Brachyspira pilosicoli 95/1000] gi|300688075|gb|ADK30746.1| outer membrane protein, peptidoglycan-associated lipoprotein [Brachyspira pilosicoli 95/1000] Length = 194 Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++ + E + +L ++ E+ + G++ A N+ LS+ R+ ++ Sbjct: 76 FQFDKAVEIGEYKQAYNLVYTILNNNPEIRIMVEGNSSKE---GKAPYNYNLSVRRSDTS 132 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 Y L+K G +R+ K + F + + + NRR + +V Sbjct: 133 YNYLIKLGTKNNRLLK-NAFGEGLPEYP--TLEA-NRRTEFIV 171 >gi|288800862|ref|ZP_06406319.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332323|gb|EFC70804.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str. F0039] Length = 394 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 12/171 (7%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P + K L+ + L ++ + L + + + I Sbjct: 233 DNAPDVDAIKALSQSQIDALNAQLNDANAENARLKDLLSKQPDQQQPVENKTVKEFIMTP 292 Query: 233 NTPMFDKSSSIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 T F+ + + I + + + + + + G+ D+ N LS +R Sbjct: 293 ITVFFNLDKTNIASKKDIFNIAGVAKYAKANNANLLVTGYADS--ATGKPGHNQWLSEER 350 Query: 292 AYSAYQVLMKSGVSEDRISKIS--GFAHHRLKIASDPMNSANRRIDILVED 340 A + L+K GV+ D I + G NRR + + + Sbjct: 351 AKTVANELVKMGVNRDNIKTDARGGVNELSPI-------QFNRRATVQITE 394 >gi|153808039|ref|ZP_01960707.1| hypothetical protein BACCAC_02325 [Bacteroides caccae ATCC 43185] gi|149129648|gb|EDM20862.1| hypothetical protein BACCAC_02325 [Bacteroides caccae ATCC 43185] Length = 380 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 46/126 (36%), Gaps = 8/126 (6%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPL 245 + +L D+ +++ L G V + +++ + F+ S Sbjct: 232 ESQLNDMRDRVN-ALKGENESLKRDLVEARNKKPEVIVKKEGGFVPRLVVVFNIGKSNIS 290 Query: 246 PETIVVLQKIGEVLAHSTEVIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-G 303 + ++ + + + + + + G+ D A N +LS RA + +++ G Sbjct: 291 KREYMNIEAMAKGIKANPDKTFTVTGYAD--KGTGSAEYNMKLSKKRAEAVRDLMVNEFG 348 Query: 304 VSEDRI 309 V ++ Sbjct: 349 VPASQL 354 >gi|304383452|ref|ZP_07365915.1| conserved hypothetical protein [Prevotella marshii DSM 16973] gi|304335416|gb|EFM01683.1| conserved hypothetical protein [Prevotella marshii DSM 16973] Length = 380 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 54/156 (34%), Gaps = 13/156 (8%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + E + ++ + + +L ++I+ S L N + T T Sbjct: 211 AQMRDQGEIDGLNAQINDLRNNLNGKDAQLSAKDRQIAELQSALDECNKKPKYVKPATVT 270 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281 + ++ +F + + P ++ I + + V+ I+G+ Sbjct: 271 NLQPTV-------LFRQGKADIDPAQYAPIELIATYMKKNPSAVVEIKGYASPE---GNP 320 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA 316 N +LS RA + L+K ++ +R+ G Sbjct: 321 ELNQKLSDARAEAVKNALIKKYKIAANRLIT-KGMG 355 >gi|253571969|ref|ZP_04849374.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6] gi|251838566|gb|EES66652.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6] Length = 363 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 10/144 (6%) Query: 197 KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIG 256 I +V + + E + + + F +S+ + L + Sbjct: 226 APIYYEPEPVVVEQPKPAPVVEQPQPKKEVVAEPMKQNIFFALNSAKIQDDQQAKLVSLI 285 Query: 257 EVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGF 315 E L ISI G+ D + + N +LS RA + + L G++ DRI I Sbjct: 286 EYLETHPAAKISITGYADVN--TGNPKINSKLSEKRAVNVAEALKVKGIAADRIK-IDFK 342 Query: 316 AHH-RLKIASDPMNSANRRIDILV 338 + + R+ I + Sbjct: 343 GDTVQPYATPEEN-----RVSICI 361 >gi|254446133|ref|ZP_05059609.1| OmpA family protein [Verrucomicrobiae bacterium DG1235] gi|198260441|gb|EDY84749.1| OmpA family protein [Verrucomicrobiae bacterium DG1235] Length = 163 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 6/110 (5%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDR 291 +F SS P L ++ L + V + GH D N L R Sbjct: 58 EPVLFQFDSSSIAPSERAKLDQVASFLKGADRVGIVLEGHCDWR---GTQEYNLALGDRR 114 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-SANRRIDILVED 340 A S L GV+ + +S + + + R++++L+ Sbjct: 115 AKSVENYLSTLGVNASVMQTLS-QGDLQATEGASSAQMAKERKVELLIIR 163 >gi|282880889|ref|ZP_06289582.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1] gi|281305271|gb|EFA97338.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1] Length = 367 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 55/183 (30%), Gaps = 30/183 (16%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 T +I + L+ + A RL+D+ + V + V Sbjct: 210 DKTPDVDAIKALSQSQIDALNAQLNDANAENARLKDMLANQKPVETPAVKKFVTTPVSVF 269 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR 278 I + +V +Q + + + + + G+ D+ Sbjct: 270 FKLDKTNI-----------------ASQKDLVNVQAVAKYAKENNCKLEVNGYADS--AT 310 Query: 279 NIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA---HHRLKIASDPMNSANRRID 335 N LS +RA + L+K GVS D I+ G S NRR Sbjct: 311 GKPAHNQWLSEERAKTVANELVKMGVSRDNITT-KGNGGVDDLSPI-------SFNRRAT 362 Query: 336 ILV 338 + V Sbjct: 363 VKV 365 >gi|332666720|ref|YP_004449508.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332335534|gb|AEE52635.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 508 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 75/254 (29%), Gaps = 26/254 (10%) Query: 90 PERSSQNKIDLSIDEHIT---KNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNS 146 P N ID I++ T K+ + + + + S+ Sbjct: 258 PLDGVLNSIDDKINQRTTGLIKDEDGDGVLDAIDQDPNTPAGAMVDTKGRTLDSDRDGVP 317 Query: 147 LTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGL 206 D E + +++ P + ++ + + + + + Sbjct: 318 DHIDKEPFYMPQPNEKVDEQGVVTNPQPGSPGRPGGPGGVTEERVKELIDQALQNYQIAD 377 Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 N + L F S+++ L +G +L + + Sbjct: 378 NRSNAAEWFLPMLH----------------FPSSTAVIKYSDYGNLAGVGRMLKANPSIR 421 Query: 267 -SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIAS 324 + G TD++ N +LS DRA + + LM G++ R + + + Sbjct: 422 LVVTGFTDST---GSESINNQLSYDRAKNVIEHLMNNHGIARGRFV-LQWKGSADNLVPT 477 Query: 325 DPMNSANRRIDILV 338 NRR + + Sbjct: 478 SSSY-MNRRAEFRI 490 >gi|260901886|ref|ZP_05910281.1| OmpA family protein [Vibrio parahaemolyticus AQ4037] gi|308108170|gb|EFO45710.1| OmpA family protein [Vibrio parahaemolyticus AQ4037] Length = 1580 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 60/196 (30%), Gaps = 22/196 (11%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 K + NK+ + + + + + L + D + Sbjct: 531 KKAKQLVNQNKKVDKAEQGTEEVTKDYLAQIPVWKTANHIQEDKLEQALKD--ARDQSGN 588 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-----VLAHSTE-VISIRGHT 272 ++ S F +S + + K VL + I GH Sbjct: 589 QIDAILVNSSRGAGIKIEFAFNSREKELKDHASIFKQLAASLANVLEDEPNLRVEIEGHA 648 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK---------I 322 + N ++S +RA A ++LMK V + R+ I+ F + Sbjct: 649 CQV---GTEKANMQVSAERAEYAKKLLMKEFPVFDGRV-SIAAFGESKPVYVPKQGEKVD 704 Query: 323 ASDPMNSANRRIDILV 338 ++P NRR+ I + Sbjct: 705 RNNPNLRQNRRVVIRI 720 >gi|196230730|ref|ZP_03129591.1| hypothetical protein CfE428DRAFT_2756 [Chthoniobacter flavus Ellin428] gi|196225071|gb|EDY19580.1| hypothetical protein CfE428DRAFT_2756 [Chthoniobacter flavus Ellin428] Length = 326 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 27/252 (10%), Positives = 66/252 (26%), Gaps = 19/252 (7%) Query: 91 ERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRD 150 + S + T + T +++ + Sbjct: 83 SPGNAVATTTSSELPATPEPTVARTEPTPATPVPA-TPEPSTPNPATRRVAMPPPPVATP 141 Query: 151 SEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADN 210 K + + + + + + + +I + + Sbjct: 142 MAKAPPAPPPVPATTPAPENASASTATIPPLVENKEENSEVKKQVLARIDAMPHLSPTNR 201 Query: 211 IVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK------IGEVLAHSTE 264 + ++I F+ P P + L +L+ T Sbjct: 202 TKLYTAVDHAHGMYKLAI------ISFESGRIAPTPAAVAQLTDGLHTSDAQRLLSDPTA 255 Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS 324 VI + G+ D+ + + N ++S+DRA + L G + + + G + Sbjct: 256 VIIVLGYADS---KGDDKRNLQISIDRADGLVRALRDQGKILNVMHAV-GMGSSEMFGKG 311 Query: 325 DPMNSANRRIDI 336 NR ++I Sbjct: 312 --QRDKNRVVEI 321 >gi|312887292|ref|ZP_07746895.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] gi|311300250|gb|EFQ77316.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603] Length = 643 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 35/109 (32%), Gaps = 12/109 (11%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 R + +FD + L + I GHTD N +LS +R Sbjct: 529 RFSILFDFDRANSTAAYTKFLSNTVASSITDGATVIIHGHTD---IIGEEDHNLKLSQER 585 Query: 292 AYSAY----QVLMKSGVSEDRISKISGFAH---HRLKIASDPMNS-ANR 332 A + L K+G + + I GF H + P NR Sbjct: 586 AREVQSILERALAKAGKNSVKFETI-GFGEDVSHSPFDNNLPEERFYNR 633 >gi|325523985|gb|EGD02181.1| putative OmpA family membrane protein [Burkholderia sp. TJI49] Length = 50 Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Query: 297 QVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 L++ GV+ R+S G + + NRR++I + Q Sbjct: 1 NALVQRGVAGGRLSA-QGMGASNPIADNATEAGRAQNRRVEIYLRAPQ 47 >gi|300773379|ref|ZP_07083248.1| major outer membrane protein OmpA [Sphingobacterium spiritivorum ATCC 33861] gi|300759550|gb|EFK56377.1| major outer membrane protein OmpA [Sphingobacterium spiritivorum ATCC 33861] Length = 394 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 7/134 (5%) Query: 188 RKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 ++ L L ++++ + ++ + + T + +++ F +S Sbjct: 243 DEEELNALRRRVNELAANNDALSKQLEEAGNKSMTNVIVNKNLLAAPILVTFKIGNSEVS 302 Query: 246 PETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302 ET V L +V+ + I G+ D N RLS+ RA + +L+ Sbjct: 303 NETRVNLGFFAKVIREGDQQVVYRITGYAD--KGTGTPEINQRLSMARAEAVKNILVNEF 360 Query: 303 GVSEDRISKISGFA 316 V +++ ++ Sbjct: 361 AVPARQLATVAAGG 374 >gi|168333865|ref|ZP_02692108.1| hypothetical protein Epulo_03110 [Epulopiscium sp. 'N.t. morphotype B'] Length = 229 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 21/178 (11%), Positives = 48/178 (26%), Gaps = 22/178 (12%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + + ++ + S ++ + + +I +F+ + Sbjct: 48 DQSTDEQSKVIASYXLVKSEINDDLMRAFGDQLEMLNMEITSGSTIXFDSPEVLFETGQA 107 Query: 243 IPLPET--------IVVLQKIGEVLAHSTEVISIRGHTDASP-----FRNIARDNWRLSL 289 + L I + I I GHT +N LS Sbjct: 108 ALNDTFKSILDKFFPIYLDLIYNNYKEVIKEIRIEGHTSTEWGNQIDVNKAYFNNMELSQ 167 Query: 290 DRAYSAYQVLMKS-GVSEDR-----ISKISGFAHHRLKIASDPM---NSANRRIDILV 338 DR + ++ + R +G + R I + +RR++ + Sbjct: 168 DRTREVLEYVINLPSSAPYRDWLIANMTANGLSSSRPIIDPKTGLEDHIKSRRVEFKI 225 >gi|114563549|ref|YP_751062.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114334842|gb|ABI72224.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400] Length = 163 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 45/109 (41%), Gaps = 4/109 (3%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRA 292 F+ +S + + + LA++++ ++++G TD + + N L+ RA Sbjct: 56 PVYFEVNSDKSYSKLDTHMSCVATYLANNSDKELNVQGFTDD---KGTVKYNKALAQRRA 112 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDR 341 + L+ G S D++ + + S RR++ + ++ Sbjct: 113 DGLVEFLISLGTSNDQLISTTKVIEDNGVKLTSSERSKTRRVNFSITNK 161 >gi|29347201|ref|NP_810704.1| outer membrane protein [Bacteroides thetaiotaomicron VPI-5482] gi|29339100|gb|AAO76898.1| outer membrane protein [Bacteroides thetaiotaomicron VPI-5482] Length = 396 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 10/109 (9%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + F +S+ + + + E + + +++ G+ D N +LS Sbjct: 294 KQNVFFALNSARIQTDQQSKIAALVEYMEKNPAAKVNVTGYADKE--TGNPVINLKLSEA 351 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILV 338 RA + + L G+S DRI I + R+ I + Sbjct: 352 RAKNVAEALKAKGISSDRI-AIDFKGDTVQPYST-----PKENRVSICI 394 >gi|93005424|ref|YP_579861.1| OmpA/MotB [Psychrobacter cryohalolentis K5] gi|92393102|gb|ABE74377.1| OmpA/MotB [Psychrobacter cryohalolentis K5] Length = 232 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 18/142 (12%) Query: 210 NIVKGVLFETTRTGILISIIDQRNTPM---FDKSSSIPLPETIVVLQKIGEVLAHSTEVI 266 N +GV+ + + +S+I + F+++S+ + + ++K+ E + + E++ Sbjct: 62 NTPEGVMTDEYGCPVAVSLIGYLTMELRVFFERNSNELQTKYLPEVEKVAEKMHSNPELV 121 Query: 267 SI-RGHTD---ASPFRNIARD--NWR------LSLDRAYSAYQVLMKSGVSEDRISKISG 314 + GHT A+ N L DRA L+K ++ D+I Sbjct: 122 VVLSGHTSELEAAHASGDIYGEMNQEKVDKRQLGRDRAQIIKTALVKRNIATDKIYTFD- 180 Query: 315 FAHHRLKIASDPMNSA--NRRI 334 A +D N+RI Sbjct: 181 CADSMPIAPNDTEEGRSMNQRI 202 >gi|256821499|ref|YP_003145462.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069] gi|256795038|gb|ACV25694.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069] Length = 459 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 16/161 (9%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 ++ A + ++ K++ + + + T + I+ FD+ Sbjct: 310 QQDQAQSVVENTGLISLKVNDATIRFNRNYPPRYLNMITDSKRLSITFH-------FDEG 362 Query: 241 SSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 + + + +Q++ + + + E + + G T S +D+ S A + L Sbjct: 363 TDELDNKAKLDIQRLVKYVEQNQLEDLFLFGFTYESGTEETDKDD---SKRLARIIAREL 419 Query: 300 MKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RRIDILV 338 K+GV + GF ++ N N RR+++ V Sbjct: 420 EKAGVKP---FYVQGFGSKGAIASNSTENGRNKNRRVEVWV 457 >gi|332830050|gb|EGK02678.1| hypothetical protein HMPREF9455_00928 [Dysgonomonas gadei ATCC BAA-286] Length = 222 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 7/102 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + F + + P ++ L + + + G+ D A N RLS + Sbjct: 117 PDPVFFRINKWVIDPTEWSKIELAVNYLNANAGSTVVVTGYADKK--TGNAAINLRLSKE 174 Query: 291 RAYSAYQVLMKS-GVSEDRISKISGFAHH-RLKI-ASDPMNS 329 R+ + + L + G+S++RI ++ + +D + Sbjct: 175 RSNAVAKALEEKYGISKNRI-SVNWKGDGLQPFELDNDKNRA 215 >gi|193213926|ref|YP_001995125.1| OmpA/MotB domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193087403|gb|ACF12678.1| OmpA/MotB domain protein [Chloroherpeton thalassium ATCC 35110] Length = 702 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 4/53 (7%) Query: 288 SLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDIL 337 S +RA + + L+ + RI + G+ R + NR + I+ Sbjct: 105 SEERALAIQRFLIYTHNIDPSRIQTV-GYGSARPLTVEKTAADKARNRAVTIV 156 >gi|325270710|ref|ZP_08137305.1| hypothetical protein HMPREF9141_2515 [Prevotella multiformis DSM 16608] gi|324986956|gb|EGC18944.1| hypothetical protein HMPREF9141_2515 [Prevotella multiformis DSM 16608] Length = 472 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 19/169 (11%), Positives = 41/169 (24%), Gaps = 22/169 (13%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 + ++R + ++ L+ + + Sbjct: 321 QRDVATEKARAEREAADRQRAEQQQAELQRRLTDCEERQAESPATVQPSHF--------- 371 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 F +SS E L+ + + T N +LS R Sbjct: 372 ---VQFAHNSSYMSREEAEHLKAFARSVRGHRLTLVAEAST-----PGADGYNQQLSERR 423 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVED 340 + L++ G + + + + RR+ I VE Sbjct: 424 LARVAEALVREGFDRADLHPQTAIGER-----NGKPAAEGRRVTIKVEK 467 >gi|282877597|ref|ZP_06286412.1| OmpA family protein [Prevotella buccalis ATCC 35310] gi|281300169|gb|EFA92523.1| OmpA family protein [Prevotella buccalis ATCC 35310] Length = 383 Score = 52.7 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 59/156 (37%), Gaps = 12/156 (7%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + E + ++ + + +L + ++IS L K V + Sbjct: 214 AQLRDQAEIDGLNAQINSLRSDLNGKDAQLSNKDRQISDLQKALEECKNKKPVYVKPA-- 271 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA 281 + + + T +F S+ + ++ I + + + + I+I+G+ A Sbjct: 272 ----TATNLQPTVLFRVGQSVVDRSQMPNVEMIAKYMKNHKDSKITIKGYASPE---GPA 324 Query: 282 RDNWRLSLDRAYSAYQVLM-KSGVSEDRISKISGFA 316 N RLS +RA + +L+ K ++ R+ + G Sbjct: 325 ELNQRLSENRAKNVKNLLVDKYKIAPSRL-TVVGMG 359 >gi|264680074|ref|YP_003279983.1| cytochrome C oxidase subunit II [Comamonas testosteroni CNB-2] gi|262210589|gb|ACY34687.1| cytochrome c oxidase, subunit II [Comamonas testosteroni CNB-2] Length = 524 Score = 52.7 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 12/107 (11%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 F+ S+ + +++ E AH I++ G D++ A N L+ +RA Sbjct: 424 QVFFETGKSVLDDKAQAAVKRAAEYWSAHKDGKIALSGFVDST---GNADKNAELAKERA 480 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337 + ++L SG++ DRI + A+ + RR+DI Sbjct: 481 KAVAKLLEDSGIAGDRIEL------RKPETITAAAGADQQARRVDIT 521 >gi|153872134|ref|ZP_02001113.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152071400|gb|EDN68887.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 386 Score = 52.7 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 89/294 (30%), Gaps = 21/294 (7%) Query: 59 DDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGST 118 + K + ++++ + +K I SS + + K+ Sbjct: 101 ESKKSSAKKHYQISASIVDLTTKTIVTNGTVWIVSSGLDYKPTASYEDNPMYIKGKLIEY 160 Query: 119 NQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPL 178 K + + + + E + T+D + + + + + + + Sbjct: 161 LLKTVQSPVGTQVDFKHSKDSKEDKADKDTKDFNFIEIKARLVEAQTAYDNGNYEQARLM 220 Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 KE + + + + + + ++ + + + +F Sbjct: 221 FKEIL----NQPDGKIIEAYGGLYATNIKLGSLEEAEQNFGNMVAVAVETRSLPIKFLFQ 276 Query: 239 KSS------SIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDR 291 + + L+++G + +I GHT I N LS R Sbjct: 277 SQMRDLLEVPTLRQQYAIWLRQMGLYFKNHPNHCVNIIGHTSQY---GIYDFNKELSKRR 333 Query: 292 AYSAYQVLMK--SGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVED 340 A ++ + SG+ E S G + + P ++ N RR++ + D Sbjct: 334 AERIQFIMAQTFSGIFEH--SSTIGKGPDETIVGTVPDSAENAIDRRVEFQITD 385 >gi|228471204|ref|ZP_04056017.1| OmpA family protein [Porphyromonas uenonis 60-3] gi|228307019|gb|EEK16101.1| OmpA family protein [Porphyromonas uenonis 60-3] Length = 338 Score = 52.7 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 65/224 (29%), Gaps = 9/224 (4%) Query: 113 LKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 +K + + I + N + +G + D K++ E Sbjct: 118 MKASVPTFAQPAMQAGQPISWGGQLYYPAGSSNLVVTQGAQGAPVANDADKIKALEDELA 177 Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 + + ++L L ++I + + + Sbjct: 178 RLKEAQQNPQRNDDQIAQQLAALRQQIDELEKAPAQAPVYNYDNRRVIHQDRSRNNVQLS 237 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + F +S + E + ++ + + + ++ + G+ N RL+ R Sbjct: 238 RSVFFKVNSDVLNAEGLEAVRNVADFVIGDPRALVLVYGYAS---IDGPVAFNNRLAAKR 294 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRID 335 A S + L +GV I + +D RR+D Sbjct: 295 AASVIKALQAAGVPAAAIKRYDNGVDTTPSKRTDA-----RRVD 333 >gi|283781950|ref|YP_003372705.1| OmpA/MotB domain-containing protein [Pirellula staleyi DSM 6068] gi|283440403|gb|ADB18845.1| OmpA/MotB domain protein [Pirellula staleyi DSM 6068] Length = 333 Score = 52.7 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 28/315 (8%), Positives = 85/315 (26%), Gaps = 32/315 (10%) Query: 45 MAFFLVMWIIN---ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLS 101 F++ ++ + + + ++ + L ++ Q + Sbjct: 19 FVTFVLAFLFAAGCSAPNAQLQQVQLEKDQLIAALKAERDAATAAKSRLATVEQRLDEAE 78 Query: 102 IDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKST 161 + + S+ + + T+ + K + + Sbjct: 79 KQLAMGGSRGVTSTASSRSSSGFSAASRPASSSPAKPGAMQPLPPPTKPKPESKPIGEPL 138 Query: 162 DLEKSINKEENYFLPPLSKEKILAMKRKKRLQD--LAKKISSTLSGLVADNIVKGVLFET 219 + ++ + + + L ++ L D+ + + E Sbjct: 139 EWRSLDKTPIRPPASGAVRQSSYEDFVSEEVTEPSLLYAVAQRDRRLRFDDATRSAVVEM 198 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASP 276 +F+ +++ E L ++ +L + + + G P Sbjct: 199 P--------------ILFEAGTAVLTAEGRESLDELSRLLRNDNLKKTKVLVAGIATGRP 244 Query: 277 -------FRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH--RLKIASDPM 327 L RA + L + GVSE+R+ ++G + Sbjct: 245 SQQAGQSTTARYSSARALGTARAQAVADYLDRHGVSENRL-AVTGSGERGDAPLAKIEQP 303 Query: 328 NSANRRIDILVEDRQ 342 + R ++I + + + Sbjct: 304 GTQVRGVEIHLLESE 318 >gi|282881743|ref|ZP_06290406.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1] gi|281304502|gb|EFA96599.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1] Length = 382 Score = 52.7 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 53/134 (39%), Gaps = 13/134 (9%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + +L D ++IS L N K + T T + ++ +F + S+ Sbjct: 239 KNAQLTDKDRQISDLQKALDDCNKRKAYVKPATATNLQPTV-------LFRQGQSVVDRS 291 Query: 248 TIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM-KSGVS 305 + ++ I + + ++I+G+ N RLS +RA + +L+ K ++ Sbjct: 292 QMPNIELIANYMKNHKSATVTIKGYASPE---GPTELNQRLSENRAKNVKNLLVDKYRIA 348 Query: 306 EDRISKISGFAHHR 319 +R+ + G Sbjct: 349 PNRLKTV-GMGETN 361 >gi|126729352|ref|ZP_01745166.1| OmpA/MotB [Sagittula stellata E-37] gi|126710342|gb|EBA09394.1| OmpA/MotB [Sagittula stellata E-37] Length = 155 Score = 52.7 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 9/111 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F + +S+ E + + L + + I GHT + A N LS RA A Sbjct: 49 FSRGTSLANGEEERLRGVLASALPDDRKHVVIVGHTGTT---GDADANLELSEKRAQVAA 105 Query: 297 QVLMKSGVSEDRISKISGFAHHRLK--IASDPMNS-ANR--RIDILVEDRQ 342 Q+ G+ +DR+ ++G + + +R R+D+ V+ R+ Sbjct: 106 QIARAMGLPDDRL-TVTGIGGSAPLPQDDGESDRAHQSRMARVDVTVQVRR 155 >gi|89073110|ref|ZP_01159649.1| hypothetical protein SKA34_01397 [Photobacterium sp. SKA34] gi|89051063|gb|EAR56520.1| hypothetical protein SKA34_01397 [Photobacterium sp. SKA34] Length = 336 Score = 52.7 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 9/104 (8%) Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + L ++ + + E I G D A+ N ++S +RA + Sbjct: 238 GQTKLNDYGRYNLGEVIATMQANPEVNAQIIGRADKV---GSAKINEKVSAERAANVANY 294 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVE 339 L +G+ R+ +S ++ +D N R + I+++ Sbjct: 295 LEANGIDASRL-TVSSVGYNNPL-KTDTSTKTNYVQRSVQIILK 336 >gi|148653764|ref|YP_001280857.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1] gi|148572848|gb|ABQ94907.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1] Length = 213 Score = 52.7 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 53/173 (30%), Gaps = 11/173 (6%) Query: 167 INKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILI 226 + + + + E + + D+ + +T +V D + Sbjct: 27 TSTDSPKQIVTTAIEASQLDSDEDGVPDINDECPNTPQNMVVDPNGCPASLLPKEGSVRA 86 Query: 227 SIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIA-RDN 284 +D +SS + L + + + + + I H R + Sbjct: 87 EFR-----AFYDTNSSEIKSKYREELDRWAKKMDEYPDAYMLIEAHISEPEARLEENASH 141 Query: 285 WRLSLDRAYSAYQVLM-KSGVSEDRISKISGFAHHRLKIASDPMNS--ANRRI 334 L+L R L+ K + +RI + ++ R +D N+R+ Sbjct: 142 QTLALSRVEGIKNYLIQKHNIDPNRIRTYT-YSAERPIAPNDDAEGIKLNQRV 193 >gi|284005612|ref|YP_003391432.1| hypothetical protein Slin_6677 [Spirosoma linguale DSM 74] gi|283820796|gb|ADB42633.1| conserved hypothetical protein [Spirosoma linguale DSM 74] Length = 222 Score = 52.7 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 + +++D+ KI + L + + + I D +FD +P Sbjct: 35 QNKVGQVEDVKAKIYTDLKAEFSQVATQW--NLEINNDLSIRFKDAD--GLFDGGKGVPT 90 Query: 246 PETIVVLQKI-GEVLA--------HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 + + +L + + LA S E + + GHT + LS RA + Sbjct: 91 GKFVNILNQFIPKYLAIISKPEYVKSIEEVRVEGHT----ASGDYQQTIELSQQRANNVL 146 Query: 297 QVLMKS------GVSEDR----ISKISGFAHHRLKIAS--------DPMNSANRRIDILV 338 L+K R I SG+ R A + +RR++ + Sbjct: 147 YYLVKHPSFFRLNQESQRHLQYILTTSGYGWSRALDADGKYSKITRKQYDVQSRRVEFRI 206 >gi|197124507|ref|YP_002136458.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] gi|196174356|gb|ACG75329.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K] Length = 357 Score = 52.7 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%) Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + DA+P RLS A +A L + GV+E R+S + G+ R + + Sbjct: 284 RVEAFVDATPDAQAD---QRLSQAMADAAIGRLRELGVAERRLSGV-GYGGERPLLPNFT 339 Query: 327 MNSA--NRRIDIL 337 + NRR++I+ Sbjct: 340 VRGRTANRRLEIV 352 >gi|162450403|ref|YP_001612770.1| hypothetical protein sce2131 [Sorangium cellulosum 'So ce 56'] gi|161160985|emb|CAN92290.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 327 Score = 52.7 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 35/280 (12%), Positives = 84/280 (30%), Gaps = 23/280 (8%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 L + + E S + + V + + +++ Sbjct: 9 KVQLPVSGVAEVSAKRRAEASPPRALRAAFAGRGLAALVASALLAGCGYTEFEWQAQLDR 68 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 ++ + + + E+G + D + + P + + + Sbjct: 69 SERLQRELVASQARVRQLEEQGPRGGAAADPHWANGPSSGLDVEPGATQPRGEPAGARPA 128 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 + + + V ++ISI + +F + P VL Sbjct: 129 SERDSDVLRAFLPV----AAGDVTVAPRDGRVVISI---PSRVLFKGNRDALSPAGEKVL 181 Query: 253 QKIGEVLAHSTE----VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM---KSGVS 305 + I ++ + + GHT + R+ W +++ +A + L ++GV Sbjct: 182 RDIAAIIRSNEPLKGLAYQVVGHTASGTPGVAWRNGWDVTVAQARAVLLFLAQPKEAGVP 241 Query: 306 EDRISKISGFAHHRLK-----IASDPMNSANRRIDILVED 340 R+S S FA + P R++I++E Sbjct: 242 LARLSLAS-FADLPPADAGGGAPAQPQEP---RVEIVIEG 277 >gi|121605878|ref|YP_983207.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120594847|gb|ABM38286.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2] Length = 179 Score = 52.7 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 19/119 (15%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 + + F + L + + A + + I G DA+ A N Sbjct: 75 VKVEQGVVKFYFASGKADLAAGASEALTDVVKG-AQAGRKLVISGFHDAT---GNAAQNA 130 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRI-----SKISGFAHHRLKIASDPMNSANRRIDILVE 339 L+ RA + L +GV+E +I +I+G + RR++I ++ Sbjct: 131 ELAKQRALAVRDALTAAGVAEGQIELKKPEQITGSG------PNAEA----RRVEISLQ 179 >gi|254785203|ref|YP_003072631.1| hypothetical protein TERTU_1036 [Teredinibacter turnerae T7901] gi|237686899|gb|ACR14163.1| conserved hypothetical OmpA family protein [Teredinibacter turnerae T7901] Length = 238 Score = 52.7 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 60/207 (28%), Gaps = 10/207 (4%) Query: 135 SNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQD 194 + S + ++ T G + + + K +R + Sbjct: 27 AASSATPSDVSATTAAKSAGIFTTATIVGGVAGGPVGFFLGALSGAYLGEQNKNHERNKT 86 Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 K+ ++L+ + ++ + + + I F + +Q Sbjct: 87 ALKEAETSLTSSRNEVAMQQRVIAKMQKQVEQPI---EFLVYFPTGEDALSHQDSQRIQS 143 Query: 255 IGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS-KI 312 + + + + + G D N LS +RA S L+ G+ RI + Sbjct: 144 LANYMTDNPSLRVRLDGFADPR---GTDEYNNVLSEERARSVVDALVARGIDSRRIEYQA 200 Query: 313 SGFAHHRLKIASDPMNSANR--RIDIL 337 G + + R RI++ Sbjct: 201 HGASMSMATAGDKDAYALERKVRIEVY 227 >gi|167622471|ref|YP_001672765.1| OmpA domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167352493|gb|ABZ75106.1| OmpA domain protein transmembrane region-containing protein [Shewanella halifaxensis HAW-EB4] Length = 346 Score = 52.7 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 5/118 (4%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284 I +F SS L ++ ++ +VI + G +D ++ N Sbjct: 228 IHTEKSSVAVLFSFDSSELTSAAKAKLDQVIQLSKSKDQDVILLNGQSDNQ---GDSQYN 284 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +LS R L+ GV +I + RR+ + + ++ Sbjct: 285 LKLSEKRVQHVEAYLVSHGVEVKKIDT-QAVGEQDAHANLRKDRALERRVIVTLTSQE 341 >gi|300778953|ref|ZP_07088811.1| OmpA/MotB family protein [Chryseobacterium gleum ATCC 35910] gi|300504463|gb|EFK35603.1| OmpA/MotB family protein [Chryseobacterium gleum ATCC 35910] Length = 443 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 9/107 (8%) Query: 231 QRNTPMFDKSS-SIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLS 288 + F S + + L + +L + I I G+TD + N +LS Sbjct: 333 DFDHVNFKMGSSTELEAGSQGQLDNLVAILKAFPDAKIKIGGYTDKT---GNEASNVKLS 389 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---SDPMNSANR 332 RA L K+GV ++ G+ K+ SD +A+R Sbjct: 390 QARADYIKSALAKAGV-GGQVLGAEGYGSKFAKVDAKASDAERAADR 435 >gi|189911990|ref|YP_001963545.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776666|gb|ABZ94967.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] Length = 159 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 9/147 (6%) Query: 195 LAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 L + L +GV+FE T F K S++ +V LQ Sbjct: 15 LTYTVQYFLRPNFDLLAEEGVIFENPYQKTEKQTDVTSFTIYFAKKSNLIPKPDLVRLQT 74 Query: 255 IGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 + + L + H DA +N +S R+ + L+ V ++I ++ Sbjct: 75 VADFLNRNRNY---EIHIDAHAVEGKNNEENIMISEKRSLEVERFLLIHFVEPNQIRRLF 131 Query: 314 GFAHHRLKIASDPMN--SANRRIDILV 338 + + + + + NRR++I + Sbjct: 132 -YGNTK--SPNQTKEHEALNRRVEIQL 155 >gi|170699781|ref|ZP_02890814.1| cytochrome c oxidase, subunit II [Burkholderia ambifaria IOP40-10] gi|170135308|gb|EDT03603.1| cytochrome c oxidase, subunit II [Burkholderia ambifaria IOP40-10] Length = 535 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 19/165 (11%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 L +++ + K +D A + + G ++ +T F Sbjct: 380 LQPKQVADARNGKMPEDTAGAAAPAEAASAPAQAASGAADQSAAASAAAPASTALSTIYF 439 Query: 238 DKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 + S +P + AH +++ G TD + A N L+ RA + Sbjct: 440 ETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQAVR 496 Query: 297 QVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+ED I I+G A + + RR++I Sbjct: 497 DALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 531 >gi|46398703|gb|AAS92037.1| IcmN protein [Legionella pneumophila] Length = 165 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI + +F S + +L +I L Sbjct: 26 DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 82 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 83 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 138 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 139 KPITSYTLGGD--RSPNARVEITFRR 162 >gi|46398701|gb|AAS92036.1| IcmN protein [Legionella pneumophila] Length = 170 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI + +F S + +L +I L Sbjct: 31 DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 87 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 88 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 143 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 144 KPITSYTLGGD--RSPNARVEITFRR 167 >gi|46398707|gb|AAS92039.1| IcmN protein [Legionella pneumophila] Length = 168 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI + +F S + +L +I L Sbjct: 29 DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 85 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 86 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 141 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 142 KPITSYTLGGD--RSPNARVEITFRR 165 >gi|46398699|gb|AAS92035.1| IcmN protein [Legionella pneumophila] Length = 166 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI + +F S + +L +I L Sbjct: 27 DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 83 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 84 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 139 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 140 KPITSYTLGGD--RSPNARVEITFRR 163 >gi|46398691|gb|AAS92031.1| IcmN protein [Legionella pneumophila] Length = 189 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI + +F S + +L +I L Sbjct: 50 DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 106 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 107 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 162 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 163 KPITSYTLGGD--RSPNARVEITFRR 186 >gi|46398709|gb|AAS92040.1| IcmN protein [Legionella pneumophila] Length = 175 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI + +F S + +L +I L Sbjct: 36 DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 92 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 93 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 148 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 149 KPITSYTLGGD--RSPNARVEITFRR 172 >gi|54293440|ref|YP_125855.1| hypothetical protein lpl0489 [Legionella pneumophila str. Lens] gi|53753272|emb|CAH14719.1| hypothetical protein lpl0489 [Legionella pneumophila str. Lens] Length = 189 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI + +F S + +L +I L Sbjct: 50 DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 106 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 107 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 162 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 163 KPITSYTLGGD--RSPNARVEITFRR 186 >gi|28898164|ref|NP_797769.1| hypothetical protein VP1390 [Vibrio parahaemolyticus RIMD 2210633] gi|260366463|ref|ZP_05778902.1| OmpA family protein [Vibrio parahaemolyticus K5030] gi|260878509|ref|ZP_05890864.1| OmpA family protein [Vibrio parahaemolyticus AN-5034] gi|260897090|ref|ZP_05905586.1| OmpA family protein [Vibrio parahaemolyticus Peru-466] gi|28806378|dbj|BAC59653.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308087682|gb|EFO37377.1| OmpA family protein [Vibrio parahaemolyticus Peru-466] gi|308091128|gb|EFO40823.1| OmpA family protein [Vibrio parahaemolyticus AN-5034] gi|308113073|gb|EFO50613.1| OmpA family protein [Vibrio parahaemolyticus K5030] Length = 1580 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 59/195 (30%), Gaps = 22/195 (11%) Query: 160 STDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFET 219 + NK+ + + + + + L + D + Sbjct: 532 KAKQLVNQNKKVDKAEQGTEEVTKDYLAQIPVWKTANHIQEDKLEQALKD--ARDQSGNQ 589 Query: 220 TRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-----VLAHSTE-VISIRGHTD 273 ++ S F +S + + K VL + I GH Sbjct: 590 IDAILVNSSRGAGIKIEFAFNSREKELKDHASIFKQLAASLANVLEDEPNLRVEIEGHAC 649 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLK---------IA 323 + N ++S +RA A ++LMK V + R+ I+ F + Sbjct: 650 QV---GTEKANMQVSAERAEYAKKLLMKEFPVFDGRV-SIAAFGESKPVYVPKQGEKVDR 705 Query: 324 SDPMNSANRRIDILV 338 ++P NRR+ I + Sbjct: 706 NNPNLRQNRRVVIRI 720 >gi|52840692|ref|YP_094491.1| LphA (DotK) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148360936|ref|YP_001252143.1| hypothetical protein LPC_2896 [Legionella pneumophila str. Corby] gi|296105998|ref|YP_003617698.1| LphA (DotK) [Legionella pneumophila 2300/99 Alcoy] gi|2897615|emb|CAA75327.1| LphA protein [Legionella pneumophila] gi|52627803|gb|AAU26544.1| LphA (DotK) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148282709|gb|ABQ56797.1| LphA (DotK) [Legionella pneumophila str. Corby] gi|295647899|gb|ADG23746.1| LphA (DotK) [Legionella pneumophila 2300/99 Alcoy] gi|307609255|emb|CBW98722.1| Dot/Icm secretion system protein [Legionella pneumophila 130b] Length = 189 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI + +F S + +L +I L Sbjct: 50 DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 106 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 107 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 162 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 163 KPITSYTLGGD--RSPNARVEITFRR 186 >gi|54296482|ref|YP_122851.1| hypothetical protein lpp0513 [Legionella pneumophila str. Paris] gi|53750267|emb|CAH11661.1| hypothetical protein lpp0513 [Legionella pneumophila str. Paris] Length = 189 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI + +F S + +L ++ L Sbjct: 50 DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEVAAFL 106 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 107 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 162 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 163 KPITSYTLGGD--RSPNARVEITFRR 186 >gi|329895780|ref|ZP_08271156.1| hypothetical protein IMCC3088_1693 [gamma proteobacterium IMCC3088] gi|328922142|gb|EGG29499.1| hypothetical protein IMCC3088_1693 [gamma proteobacterium IMCC3088] Length = 44 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 +++ G++E R ++GFA ++ NRR++I++++ Sbjct: 1 MIINQGLAELRF-SVTGFADTEPVDTNETPASRQRNRRVEIIIDN 44 >gi|156124986|gb|ABU50810.1| putative antigen [Acinetobacter venetianus] Length = 262 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 15/109 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD+S++ + ++ + I E + S I++ G D N +LS RA + Sbjct: 154 FDRSNANAIEQSSSSVAAIAERIKQSNSTGPITVAGFADPL---GKFSYNHQLSAQRANT 210 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMN------SANRRI 334 ++L+ G+ +RI +I + L + N + NRR+ Sbjct: 211 VAKLLVNEGIDVNRI-QIQANSQTDLYQQCAGNKTNNRLVGCLAPNRRV 258 >gi|148257384|ref|YP_001241969.1| hypothetical protein BBta_6138 [Bradyrhizobium sp. BTAi1] gi|146409557|gb|ABQ38063.1| hypothetical protein BBta_6138 [Bradyrhizobium sp. BTAi1] Length = 268 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 62/237 (26%), Gaps = 11/237 (4%) Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 +P + + E T + + L + Q Sbjct: 9 GSSPLPHGMPSSSAAARFEPCTVAGEEAPVWLAAAFAVAGVLIAIMSAALWQQSLARTPE 68 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 E++ P + + IS Sbjct: 69 VAASAPPAVTQAPMPAPAERTPEPMLKPPETPSPEPLQTPVTIAAPAAAPEPVISVPSPT 128 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP-ETIVVLQKIGEVLAHSTE 264 VA T + F++ S+ P P + L + LA + Sbjct: 129 PVAALPEPATAARKAATE-----CFAPLSIAFERGSTRPNPADVKRSLPILQSALARHGD 183 Query: 265 VIS-IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS-KISGFAHHR 319 + GHTDA N LS RA + ++L + G++ RI+ + +G R Sbjct: 184 AAVLVEGHTDA---SGSEDLNVLLSYSRAKAVAELLKRDGIAAHRITVRAAGAGEAR 237 >gi|295105094|emb|CBL02638.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Faecalibacterium prausnitzii SL3/3] Length = 392 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 33/104 (31%), Gaps = 4/104 (3%) Query: 231 QRNTPMFDKSSSIPLPETIVV--LQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLS 288 F S+ L E L + E L ++ I + A LS Sbjct: 268 SAEQVAFQPDSTAFLDEAAARAALNGLAEQLKGTSAAHYIVAGSTAQVDNASREGAQALS 327 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332 L RA + VL+++GV DR G + NR Sbjct: 328 LARAQAVRDVLVEAGVPADRF-TCLGLG-NEPTSVRSANEPENR 369 >gi|290953318|ref|ZP_06557939.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp. holarctica URFT1] gi|295313451|ref|ZP_06804053.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp. holarctica URFT1] Length = 108 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 259 LAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 +AH + I + G+TD + N+ L RA + Y L+ V++D+I +S + Sbjct: 3 IAHPDQPIKLSGNTDPR---GSEKYNFNLGQKRAEAVYNYLLGKNVNKDQICVVS-YGKL 58 Query: 319 RLKI 322 + Sbjct: 59 KPAA 62 >gi|46398711|gb|AAS92041.1| IcmN protein [Legionella pneumophila] Length = 165 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + ISI + +F S + +L +I L Sbjct: 26 DATIIKMMTDLNKKGIKVASVGQNYXISI---PASALFADQSPRLNWASYSLLNEIAAFL 82 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 83 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 138 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 139 KPITSYTLGGD--RSPNARVEITFRR 162 >gi|119900062|ref|YP_935275.1| hypothetical protein azo3773 [Azoarcus sp. BH72] gi|119672475|emb|CAL96389.1| conserved hypothetical secreted protein [Azoarcus sp. BH72] Length = 392 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 74/251 (29%), Gaps = 15/251 (5%) Query: 90 PERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTR 149 +S+ ++D+ T+ + ++ + N+ S Sbjct: 146 IAQSAVPVQRAAVDQTPTRFFAESPSMVKDRVTEGYLKTAETPAGGNADPVYLGSVSTAA 205 Query: 150 DSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVAD 209 + + + EK++ P + + L + ++ Sbjct: 206 VLAEALEAYNAEQWEKALTYYTEAASRPDGAQLRVFNGIYLANVQLGRHEAAE------Q 259 Query: 210 NIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR 269 + V + + I+ + F + +++I ++I Sbjct: 260 AFGRIVALGLATDNLAVRILFNPGSTDF-WRDQRVSGAYPMWIRQIARETQAGGYCLTIV 318 Query: 270 GHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE-DRISKISGFAHHRLKIASDPMN 328 GHT + N RLSL RA +L++ V +I G + + S + Sbjct: 319 GHTSRT---GAENVNARLSLARARVMRDLLLRE-VPALSTALRIDGKGSSQNIVGSGTDD 374 Query: 329 SA---NRRIDI 336 +RR++ Sbjct: 375 VRDSLDRRVEF 385 >gi|299534095|ref|ZP_07047447.1| cytochrome c oxidase, subunit II [Comamonas testosteroni S44] gi|298718004|gb|EFI59009.1| cytochrome c oxidase, subunit II [Comamonas testosteroni S44] Length = 503 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 12/109 (11%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 F+ S+ + ++K E AH I++ G D++ A N L+ + Sbjct: 401 PYQVFFETGKSVLDDKAQAAVKKAAEYWSAHKDGKIALSGFVDST---GNADKNAELAKE 457 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337 RA + ++L SG++ DRI + A+ + RR+DI Sbjct: 458 RAKAVAKLLEDSGIAGDRIEL------RKPETITAAAGADQQARRVDIT 500 >gi|46398693|gb|AAS92032.1| IcmN protein [Legionella pneumophila] Length = 145 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI + +F S + +L +I L Sbjct: 6 DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFL 62 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 63 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 118 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 119 KPITSYTLGGD--RSPNARVEITFRR 142 >gi|325281084|ref|YP_004253626.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324312893|gb|ADY33446.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712] Length = 367 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 10/113 (8%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLD 290 R F +SS+ L + + + TE + G+ D R N LS Sbjct: 263 RQDIFFALNSSVILASETAKIDSLVAFMKTHTETQVVITGYADVQ--TGNPRYNKVLSQR 320 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILVEDRQ 342 RA +L +G+S +RI + + P+ N R+ I + ++ Sbjct: 321 RAEQVAVLLTVNGISRERI-TVFAKGDTEQPF----PVMEQN-RVAICLIGKK 367 >gi|325525379|gb|EGD03214.1| cytochrome c oxidase, subunit II [Burkholderia sp. TJI49] Length = 534 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++P + AH +++ G TD + A N L+ RA + Sbjct: 438 FETGKSTLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQAV 494 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+ED I I+G A + + RR++I Sbjct: 495 RDALKAAGVAEDHIVLKKPETITGGADAK--------EA--RRVEI 530 >gi|330719881|gb|EGG98362.1| hypothetical protein imdm_109 [gamma proteobacterium IMCC2047] Length = 234 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 46/137 (33%), Gaps = 5/137 (3%) Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS-SS 242 + +++ + +++ + + E + ++ + +F S Sbjct: 64 EQVATADQVESVESELADARAEADLLSRKLAASEEASNDYQQFALQQLQLELLFKTGASE 123 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 + LP + + +L ++ + G+ D A N LS R + L+ Sbjct: 124 LTLPAQLKMSLLASLLLEQPKLMVRLDGYADPR---GDANYNQTLSAKRVQVVQEFLITK 180 Query: 303 GVSEDRISKISGFAHHR 319 GV+ +R I + Sbjct: 181 GVAPERF-TIHSHGASQ 196 >gi|58616261|ref|YP_195390.1| OmpA family protein [Azoarcus sp. EbN1] gi|56315722|emb|CAI10366.1| OmpA family protein [Aromatoleum aromaticum EbN1] Length = 201 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 62/218 (28%), Gaps = 22/218 (10%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + + L + + + +D + + ++ + Sbjct: 2 KPQVPLNILLAAAAFIGATSVIAQDRHSVYPFEATEYEPSQFSYGVGQDTATTLIKRPVQ 61 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP- 244 + ++ + + + +D G + F S++P Sbjct: 62 KGETQWVEMERTPLRTASTSAKSDGTGSNTGDYDLIPGATV---------FFAFDSTVPL 112 Query: 245 LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGV 304 PE I Q + I + G TD N RL+ RA S + G+ Sbjct: 113 NPEVISSFQFGDDT------KIRLIGRTDPI---GTNSYNDRLAYKRAASVASLFKLKGM 163 Query: 305 SEDRISKISGFAHHRLKIASDPM--NSANRRIDILVED 340 + ++ +S +D NR++ I + Sbjct: 164 KQSQMELVS-LGARSPIAPTDTESGRQKNRQVLIELRK 200 >gi|83643026|ref|YP_431461.1| phosphate ABC transporter periplasmic protein [Hahella chejuensis KCTC 2396] gi|83631069|gb|ABC27036.1| ABC-type phosphate transport system, periplasmic component [Hahella chejuensis KCTC 2396] Length = 460 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 11/131 (8%) Query: 216 LFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS---TEVISIRGHT 272 + + + F S + L+++ E L S + + G Sbjct: 334 SVPESFRQLTRNYNRLTVNFRFAAGRSKLDNKAHRDLERLLEYLRESSRSPTDLMLIGFA 393 Query: 273 DASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSA 330 D +S RA + + L + G + ++G+ ++ A+ + S Sbjct: 394 DK---SGDELRAQMVSELRATAVSRALKERGAE---VKAVTGYGQYKTVGATGGEHGASR 447 Query: 331 NRRIDILVEDR 341 N R+++ V Sbjct: 448 NGRVEVWVRKD 458 >gi|332877840|ref|ZP_08445578.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684135|gb|EGJ56994.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 362 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 38/109 (34%), Gaps = 10/109 (9%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLD 290 + F +S++ ++++ L + + + G+ D + N LSL Sbjct: 260 QENVFFKLNSAVIRASEEAKIERLAAYLTANPQAKVVICGYAD--KATGTPKINDALSLK 317 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIASDPMNSANRRIDILV 338 RA + + L + RI ++ + N R+ I + Sbjct: 318 RAQAVSKALQVKKIDAGRI-RVEHKGDSVQPF----TEVEKN-RVSICI 360 >gi|237751010|ref|ZP_04581490.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229373455|gb|EEO23846.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 222 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 56/183 (30%), Gaps = 24/183 (13%) Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 L K+ + ++ + L + + L + K + +I Q+ Sbjct: 12 TLENEKKQLEIQNEKMRDLAENYSNLQQELYKDLMQEFGKDLKKWDAFIDEDTTIRFQKQ 71 Query: 234 TPMFDKSSSIPLPETIVVLQKIG---------EVLAHSTEVISIRGHTD-----ASPFRN 279 +FD +L E E I I GHT A Sbjct: 72 DILFDVGQKRVKERFQKILDDFFPRYVRILYGEKYRDFIEDIRIEGHTSKDWEGAQSLER 131 Query: 280 IARDNWRLSLDRAYSAYQVLMKS-GVSED-----RISKISGFAHHRLKIASDPMNSANRR 333 N LS +RA+ + +++ ++ + +G + + + + +RR Sbjct: 132 RYLGNAELSQERAFQVLKYCFSLPSINDKQEWLIKLLRANGVSFAKPLASDE----LSRR 187 Query: 334 IDI 336 ++ Sbjct: 188 VEF 190 >gi|114762079|ref|ZP_01441547.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601] gi|114545103|gb|EAU48106.1| OmpA domain protein [Roseovarius sp. HTCC2601] Length = 517 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 50/165 (30%), Gaps = 12/165 (7%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + + ++ LA I + + V + S F+ Sbjct: 360 DQMPEEIALAQQGDRLANAIIVAEGDQGLTGLQRLVATLAPMRRLTTSFR-------FEA 412 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVL 299 + ++ +Q++ L S + A N ++ +RA + + Sbjct: 413 GETGLDAQSRSNVQQLARALEAGEYDGRELVFVGFSDAQGPAEANLEIAYERAEAVRAAV 472 Query: 300 MKSGVSED--RI-SKISGFAHHRLKIASDPMNSA--NRRIDILVE 339 + + + D R+ + F D + NRR+++ + Sbjct: 473 LNAAEAADLRRLELGVEAFGEAMPMACDDTVWGRQVNRRVEVWLR 517 >gi|320106453|ref|YP_004182043.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4] gi|319924974|gb|ADV82049.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4] Length = 594 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 38/328 (11%), Positives = 86/328 (26%), Gaps = 46/328 (14%) Query: 50 VMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKN 109 V+++ + N TAS G P + + D + K Sbjct: 237 VVYVGSMETVGVHARAVDADNDALIYAWTASSGTVTGSGPDAQWNY--ADAPAGAYTVKV 294 Query: 110 SVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINK 169 V+ G T+ ++ + ++ S + + D ++ Sbjct: 295 HVEDGKGGTSDCAVDIQVAPKVNHVPVLTCSVDQASVEAGEIVHLTANGSDAD-NDALTY 353 Query: 170 EENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISII 229 L+ + + + ++ + + T + +I + Sbjct: 354 TWETTGGQLAGSGAAGTLQTPTGAGSSYTVMGHVNDGHGGSADCSLTVTTHPSAAMIKLE 413 Query: 230 DQR--NTPMFDKSSSIPLPETIVVLQKIGEVL------------AHSTEVISIRGHTDAS 275 ++ ++ F + ++ + L A + + GH D Sbjct: 414 ERLELHSIYFPTAEPTEKEPNRGLVPSQHKTLLSLAADFSEYLKARPDAHLILEGHADPR 473 Query: 276 PFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR--------------L- 320 N +LS R + L++ GV E I + F Sbjct: 474 ---GSVEYNQKLSGLRVEITKRFLVEHGVPEQSIDQ-KAFGDQHNLSKAQVTDAIEHTPE 529 Query: 321 KIASDPMNSA----------NRRIDILV 338 D + NRR+D+ + Sbjct: 530 LGPEDRARALRNMTTILLASNRRVDVTL 557 >gi|206559146|ref|YP_002229906.1| putative cytochrome c oxidase [Burkholderia cenocepacia J2315] gi|198035183|emb|CAR51057.1| putative cytochrome c oxidase [Burkholderia cenocepacia J2315] Length = 524 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S +P + AH +++ G TD + A N L+ RA + Sbjct: 428 FETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQAV 484 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+ED I I+G A + + RR++I Sbjct: 485 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 520 >gi|78067645|ref|YP_370414.1| cytochrome c oxidase, subunit II [Burkholderia sp. 383] gi|77968390|gb|ABB09770.1| Cytochrome c oxidase, subunit II [Burkholderia sp. 383] Length = 531 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S +P + AH +++ G TD A N L+ RA + Sbjct: 435 FETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDK---SGSADANAELAKHRAQAV 491 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+ED I I+G A + + RR++I Sbjct: 492 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 527 >gi|149912029|ref|ZP_01900622.1| sodium-type flagellar protein MotY [Moritella sp. PE36] gi|149804890|gb|EDM64925.1| sodium-type flagellar protein MotY [Moritella sp. PE36] Length = 293 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 46/116 (39%), Gaps = 7/116 (6%) Query: 227 SIIDQRNTPM-FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFR-NIARDN 284 S+ D + + F+ +S ++ + L I E L +S ++ + D+ N Sbjct: 176 SLDDIAYSVLDFNAASDELTQQSQLRLAMITEFLQYSPDINVVV--VDSYTGSYGDELQN 233 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 + S RA + Q + +G+ I +G+ ++ N+R+ I + Sbjct: 234 LQTSSLRAENIKQYFLDNGLKNLEIQT-NGYGEKSQIASNGNIIERQKNQRVVISL 288 >gi|254247128|ref|ZP_04940449.1| Cytochrome c oxidase, subunit II [Burkholderia cenocepacia PC184] gi|124871904|gb|EAY63620.1| Cytochrome c oxidase, subunit II [Burkholderia cenocepacia PC184] Length = 532 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S +P + AH +++ G TD + A N L+ RA + Sbjct: 436 FETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQAV 492 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+ED I I+G A + + RR++I Sbjct: 493 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 528 >gi|107023780|ref|YP_622107.1| cytochrome c oxidase, subunit II [Burkholderia cenocepacia AU 1054] gi|105893969|gb|ABF77134.1| cytochrome c oxidase, subunit II [Burkholderia cenocepacia AU 1054] Length = 532 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S +P + AH +++ G TD + A N L+ RA + Sbjct: 436 FETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQAV 492 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+ED I I+G A + + RR++I Sbjct: 493 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 528 >gi|116690867|ref|YP_836490.1| cytochrome c oxidase, subunit II [Burkholderia cenocepacia HI2424] gi|116648956|gb|ABK09597.1| cytochrome c oxidase, subunit II [Burkholderia cenocepacia HI2424] Length = 532 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S +P + AH +++ G TD + A N L+ RA + Sbjct: 436 FETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQAV 492 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+ED I I+G A + + RR++I Sbjct: 493 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 528 >gi|268315879|ref|YP_003289598.1| PKD domain containing protein [Rhodothermus marinus DSM 4252] gi|262333413|gb|ACY47210.1| PKD domain containing protein [Rhodothermus marinus DSM 4252] Length = 317 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 6/84 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + N FD++SS+ LQ+ ++L + + G R+ +LS Sbjct: 210 EMNPVFFDRNSSVLNDAARSALQENLQILQDCPNLSVRVEGWA-----APGERNPQQLST 264 Query: 290 DRAYSAYQVLMKSGVSEDRISKIS 313 DRA + Q +G+ RI+ +S Sbjct: 265 DRARAVEQFYTSNGIPASRITTVS 288 >gi|313205988|ref|YP_004045165.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868] gi|312445304|gb|ADQ81659.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868] gi|315022301|gb|EFT35329.1| OmpA/MotB [Riemerella anatipestifer RA-YM] gi|325336572|gb|ADZ12846.1| OmpA4 [Riemerella anatipestifer RA-GD] Length = 215 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 8/106 (7%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSL 289 + F S+ L + + ++L + I I G+TD + N ++S Sbjct: 106 DFDHVNFKMGSTNQLESGAEQIDNLAKILKAYPDAKIKIGGYTDKT---GSEETNVKISQ 162 Query: 290 DRAYSAYQVLMKSGVSEDRISKISGFAHHRLKI---ASDPMNSANR 332 RA L K+GV ++ G+ K+ ASD +++R Sbjct: 163 ARAEFIKAQLEKAGVGA-QVVSAEGYGSKFAKVAADASDEERASDR 207 >gi|192360398|ref|YP_001983048.1| putative sodium-type flagellar protein MotY [Cellvibrio japonicus Ueda107] gi|190686563|gb|ACE84241.1| putative sodium-type flagellar protein MotY [Cellvibrio japonicus Ueda107] Length = 392 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 6/75 (8%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 + H+D A + S +A Q L+ G++ +I+ ++ Sbjct: 235 VDAHSDKRD---EAEQSMDASRTQAELVSQYLIAKGMNVAQITS-RWHGDKYPAASNATE 290 Query: 328 --NSANRRIDILVED 340 + NRR+ + +E+ Sbjct: 291 QGRAQNRRVTVRLEN 305 >gi|327405902|ref|YP_004346740.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM 16823] gi|327321410|gb|AEA45902.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823] Length = 238 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 5/106 (4%) Query: 235 PMFDKSSSIPLPETIVVLQK-IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 F + + + H I ++D+ N +LS DRA Sbjct: 133 VFFPYKKWSINLSFYQEIDDLVNQYFNHKGSSFKINAYSDS---HGSEESNLKLSKDRAK 189 Query: 294 SAYQVLMKSGVSEDRISKISGFAH-HRLKIASDPMNSANRRIDILV 338 L+ + R + G + +I ++ NRR I++ Sbjct: 190 FIRNYLINEKKVDARDIQTEGKGSKSKERITEPDLDFMNRRAVIIL 235 >gi|19352400|ref|NP_598158.1| hypothetical protein pB4p61 [uncultured bacterium] gi|19070067|emb|CAD24383.1| Upf30.5 protein [uncultured bacterium] Length = 147 Score = 51.9 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 13/108 (12%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRA 292 F SS+ P+ E+LA + +I I G T L+L RA Sbjct: 43 VSFPDSSTTFRPDAST-----AELLAEAKGAAIIYISGRTSTLRASASDE---ALALRRA 94 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 SA Q L+ GVS +I ++ + + N+R+DI V Sbjct: 95 LSARQYLIARGVSPLKIM-VNFASASDFVADNSTPEGRYQNQRVDIEV 141 >gi|58616636|ref|YP_195845.1| outer membrane protein [Achromobacter xylosoxidans A8] gi|190571962|ref|YP_001967686.1| hypothetical protein pCNB_p42 [Comamonas testosteroni CNB-1] gi|311109703|ref|YP_003982555.1| outer membrane protein 2 [Achromobacter xylosoxidans A8] gi|58416234|emb|CAI47829.1| outer membrane protein [Achromobacter xylosoxidans] gi|119943700|gb|ABM06222.1| hypothetical protein [Comamonas testosteroni CNB-1] gi|310764392|gb|ADP19840.1| outer membrane protein 2 [Achromobacter xylosoxidans A8] Length = 147 Score = 51.9 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 13/108 (12%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRA 292 F SS+ P+ E+LA + +I + G T L+L RA Sbjct: 43 VSFSDSSTTFRPDAST-----AELLAEAKGATIIYVSGRTSTLRPSAADE---ALALRRA 94 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 SA Q L+ GVS +I ++ + + N+R+DI V Sbjct: 95 LSARQYLIARGVSPLKIM-VNFASASDFVADNSTPEGRHQNQRVDIEV 141 >gi|157364674|ref|YP_001471441.1| OmpA/MotB domain-containing protein [Thermotoga lettingae TMO] gi|157315278|gb|ABV34377.1| OmpA/MotB domain protein [Thermotoga lettingae TMO] Length = 289 Score = 51.9 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 6/99 (6%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-LAHSTEV 265 +A+ + + G +I + D F +S+ PE +L KIG + + H+T V Sbjct: 88 IAEEYKGKITIQEKDEGTVIIMQD---MAFFYPASAKLTPEAKELLGKIGSIVIEHTTNV 144 Query: 266 ISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVLMKS 302 + I G+ D P +I NW LS RA S Q + Sbjct: 145 LQIYGYADDQPLSQDSIYVSNWHLSSARASSVVQFFTEE 183 >gi|167585369|ref|ZP_02377757.1| cytochrome c oxidase, subunit II [Burkholderia ubonensis Bu] Length = 514 Score = 51.9 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + + + + +++ G TD A N L+ RA + Sbjct: 418 FETGKDTLPADAQSAIAAAADYAKAHPDAKLALSGFTDK---SGSADANAELAKHRAQAV 474 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+ED I I+G A + + RR++I Sbjct: 475 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 510 >gi|46398705|gb|AAS92038.1| IcmN protein [Legionella pneumophila] Length = 164 Score = 51.9 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI +F S + +L +I L Sbjct: 25 DATIIKMMTDLNKKGIKVASVGQNDLISIXAS---ALFADQSPRLNWASYSLLNEIAAFL 81 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 82 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 137 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 138 KPITSYTLGGD--RSPNARVEITFRR 161 >gi|46398695|gb|AAS92033.1| IcmN protein [Legionella pneumophila] Length = 167 Score = 51.9 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI +F S + +L +I L Sbjct: 28 DATIIKMMTDLNKKGIKVASVGQNDLISIXAS---ALFADQSPRLNWASYSLLNEIAAFL 84 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 85 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 140 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 141 KPITSYTLGGD--RSPNARVEITFRR 164 >gi|296127832|ref|YP_003635084.1| hypothetical protein Bmur_2818 [Brachyspira murdochii DSM 12563] gi|296019648|gb|ADG72885.1| hypothetical protein Bmur_2818 [Brachyspira murdochii DSM 12563] Length = 197 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 4/96 (4%) Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + V+ + + + + ++ + GH D + N N+RLS RA V++ Sbjct: 77 YNIEDYSYVMNEVMTFMSNNRNSILIVEGHADITGHNNGDI-NFRLSERRASVIRDVILS 135 Query: 302 SGVSEDRISKISGFAHHRLKIASDPMNSANRRIDIL 337 SG S R+ +I ++ K S NRR+D + Sbjct: 136 SGFSYKRV-QIFAYSDIIPKY--ITNISQNRRVDFV 168 >gi|126732885|ref|ZP_01748676.1| OmpA domain protein [Sagittula stellata E-37] gi|126706661|gb|EBA05735.1| OmpA domain protein [Sagittula stellata E-37] Length = 518 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 9/174 (5%) Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKIS--STLSGLVADNIVKGVLFETTRTGILISIIDQ 231 P A + ++++ + + ++ G+ TG L + Sbjct: 346 RSPQAQIVIRRAGFVDQAAEEISADLQGDRLSNAILTAQGANGLATLQRLTGTLAPMRRL 405 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 + F+ SS ++ + ++ L S A N ++ R Sbjct: 406 TTSFRFETGSSRLDAQSRSNVLQLAHDLEAGRYDGRKLLFVGFSDGAGPADANLAIARRR 465 Query: 292 AYSAYQVLMKSGVSEDRISKIS----GFAHHRLKIASDPMNSA--NRRIDILVE 339 A + ++ ++ F D NRR+++ V+ Sbjct: 466 AEAVKSA-VEVTAETADLTSFELALDAFGEAMPMACDDTSWGRQVNRRVEVWVK 518 >gi|313886679|ref|ZP_07820389.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923841|gb|EFR34640.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I] Length = 310 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 62/196 (31%), Gaps = 13/196 (6%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 N + +G D K++ +E + + ++L L ++ Sbjct: 122 PAGSNFVVTQGAQGALPTNDADKIKALEEELARLKATQQNPQRDDDQIAQQLAALRNQLD 181 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-L 259 V + + V+ + + + F +S + E ++ + + + Sbjct: 182 ELEKAPVYNYDNRRVIHQDRSRNNV----QLSRSVFFKVNSDVLNAEGREAVRNVADFVI 237 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 ++ + G+ N +L+ RA S + L ++GV I + Sbjct: 238 NDPRALVLVYGYAS---IDGPVDFNNKLAAKRAASVIKALQEAGVPAAAIKRYDNGVDTT 294 Query: 320 LKIASDPMNSANRRID 335 +D RR+D Sbjct: 295 PAKRTDA-----RRVD 305 >gi|270159049|ref|ZP_06187705.1| IcmN (DotK) [Legionella longbeachae D-4968] gi|269987388|gb|EEZ93643.1| IcmN (DotK) [Legionella longbeachae D-4968] Length = 183 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 50/160 (31%), Gaps = 8/160 (5%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 L + K + +T+ L + KGV T +ISI +F+ + Sbjct: 27 ALDKEEPKYPCKVLGACDATIMKLAKNLNRKGVKVITIGQDYMISIPASY---LFESETP 83 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 ++ +L +I L ++ + L+L R+ + L Sbjct: 84 HLKWKSYALLNEIAVFLKQFRKIAINIASYSSKYISPQREH--ALTLARSRVVSEYLWSQ 141 Query: 303 GVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVED 340 GV R G + +S N R++I Sbjct: 142 GVD-SRFIFTQGLGSDKPIIAYTEGGDSSVNARVEITFRR 180 >gi|296126314|ref|YP_003633566.1| OmpA family protein [Brachyspira murdochii DSM 12563] gi|296018130|gb|ADG71367.1| OmpA family protein [Brachyspira murdochii DSM 12563] Length = 200 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 43/117 (36%), Gaps = 11/117 (9%) Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARD 283 +++ +F + + ++ E L +T I HT Sbjct: 64 RGRVLETNPKIIFKLVETNIPASADITFAQVMEFLDKNTNANIILEAHTSNRGI--AYPY 121 Query: 284 NWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RRIDILV 338 N+ LS+ RA + + L+ GV+ +R+ + S + + N RR + ++ Sbjct: 122 NYNLSVVRAKNGKKYLLDKGVASERVIE-SPLGEALPEYPT-----QNDLRRYEFVI 172 >gi|289166115|ref|YP_003456253.1| Hypothetical protein of unknown function [Legionella longbeachae NSW150] gi|18693264|gb|AAL78305.1|AF288617_2 DotK [Legionella longbeachae] gi|288859288|emb|CBJ13222.1| Hypothetical protein of unknown function [Legionella longbeachae NSW150] Length = 167 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 50/160 (31%), Gaps = 8/160 (5%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 L + K + +T+ L + KGV T +ISI +F+ + Sbjct: 11 ALDKEEPKYPCKVLGACDATIMKLAKNLNRKGVKVITIGQDYMISIPASY---LFESETP 67 Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302 ++ +L +I L ++ + L+L R+ + L Sbjct: 68 HLKWKSYALLNEIAVFLKQFRKIAINIASYSSKYISPQREH--ALTLARSRVVSEYLWSQ 125 Query: 303 GVSEDRISKISGFAHHRLK--IASDPMNSANRRIDILVED 340 GV R G + +S N R++I Sbjct: 126 GVD-SRFIFTQGLGSDKPIIAYTEGGDSSVNARVEITFRR 164 >gi|170734192|ref|YP_001766139.1| cytochrome c oxidase subunit II [Burkholderia cenocepacia MC0-3] gi|169817434|gb|ACA92017.1| cytochrome c oxidase, subunit II [Burkholderia cenocepacia MC0-3] Length = 532 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S +P + AH +++ G TD + A N L+ RA + Sbjct: 436 FETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANTELAKHRAQAV 492 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+ED I I+G A + + RR++I Sbjct: 493 RDALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 528 >gi|289548246|ref|YP_003473234.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484] gi|289181863|gb|ADC89107.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484] Length = 209 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 4/82 (4%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 FD + L + + + S + + G D ++ N+ LS+ RA Sbjct: 111 FDFDKFNIKKKEAKKLDEAVDKIKSSGREVLVVGFADKV---GTSKYNFNLSMWRAQMVA 167 Query: 297 QVLMKSGVSEDRISKISGFAHH 318 L K GV +I +++ + Sbjct: 168 SYLAKKGVDIGKI-RMAAYGKE 188 >gi|71906332|ref|YP_283919.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71845953|gb|AAZ45449.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 184 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 57/159 (35%), Gaps = 8/159 (5%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + K+ + LA + + + + + T I + N F S+ Sbjct: 31 ELPKQEEPLASVVQNGHQAPLPRSTGARIEMHRDETEEAPVIAE-ENAVFFTLGSAALSH 89 Query: 247 ETIVVLQKIGEVL-AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVS 305 L+ I E L A T + + G+ + + N +S +R + L K GV Sbjct: 90 SGTQKLEIIAERLIADRTLHVLLVGYAND---NGSSSFNLAVSDNRLATVAAFLRKRGVH 146 Query: 306 EDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 ++I ++ + RR+D+++ +++ Sbjct: 147 GEQI-RVQALGSEKNLSNCRSSKCRQKFRRVDLVIRNKK 184 >gi|313610151|gb|EFR85461.1| chemotaxis protein MotB [Listeria monocytogenes FSL F2-208] Length = 98 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 42/96 (43%) Query: 19 KKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 K+ + +W I Y+D +T+L+A F+V++ ++ D + + F + Sbjct: 3 KRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAA 62 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLK 114 ++ ++ P+ + N + +++E K + Sbjct: 63 GNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQ 98 >gi|221065313|ref|ZP_03541418.1| cytochrome c oxidase, subunit II [Comamonas testosteroni KF-1] gi|220710336|gb|EED65704.1| cytochrome c oxidase, subunit II [Comamonas testosteroni KF-1] Length = 524 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 12/107 (11%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 F+ S + ++K E AH I++ G D++ A N L+ +RA Sbjct: 424 QVFFETGKSALDDQAQAAVKKAAEYWKAHKDGKIALSGFVDST---GNADKNAELAKERA 480 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRL--KIASDPMNSANRRIDIL 337 + ++L SG++ DRI + A+ + RR+DI Sbjct: 481 KAVAKLLEDSGIAGDRIEL------RKPETITAAAGADQQARRVDIT 521 >gi|71907423|ref|YP_285010.1| OmpA/MotB [Dechloromonas aromatica RCB] gi|71847044|gb|AAZ46540.1| OmpA/MotB [Dechloromonas aromatica RCB] Length = 156 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 15/116 (12%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWR 286 + + F ++ V+ K E L+ + ++ + G D N Sbjct: 52 VGEALAKVFFAVGAAALDEADKGVVAKTLEALSANPNAIVLLSGFHD---PSGDPAKNAE 108 Query: 287 LSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL---KIASDPMNSANRRIDILVE 339 L+ RA S L+ +GV+ +RI + A P RR++I V+ Sbjct: 109 LAKHRAQSVRDALVAAGVAAERIK------FRKPESTLGAGSPEEG--RRVEIRVQ 156 >gi|149919334|ref|ZP_01907816.1| hypothetical protein PPSIR1_03938 [Plesiocystis pacifica SIR-1] gi|149819834|gb|EDM79258.1| hypothetical protein PPSIR1_03938 [Plesiocystis pacifica SIR-1] Length = 383 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 11/79 (13%) Query: 265 VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR-ISKISGFAH------ 317 + I GH D N N LS RA + L SE R + Sbjct: 65 HLLIIGHADED---NTDEYNRALSQRRAEHVRERLAARLPSEARERLHLEARGEWDASDR 121 Query: 318 HRLKIASDPMNSANRRIDI 336 + + + NRR+++ Sbjct: 122 AEP-SSDEDAKARNRRVEL 139 >gi|251733459|emb|CAR82479.1| pal [Rhizobium undicola] Length = 87 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 5/88 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ + L + + L ++ I++ GH D N L RA + Sbjct: 1 TDSTSIRADAQQTLDRQAQWLQRYSQYPITVEGHADER---GTREYNLALGARRAAATKD 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD 325 L+ G+ RI IS + R D Sbjct: 58 YLVSRGIPASRIKTIS-YGKERPVATCD 84 >gi|302875501|ref|YP_003844134.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans 743B] gi|307687955|ref|ZP_07630401.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans 743B] gi|302578358|gb|ADL52370.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B] Length = 233 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 25/167 (14%) Query: 190 KRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETI 249 + ++ L + + ++F+ + I + +F E + Sbjct: 58 DDIAKQRAELYERLENDLKPKLGDDIIFDKENGRLEI-----KTEVLFQVDKYELTGEGV 112 Query: 250 ---------VVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 V + + ++GHTD + A N LS +RA S ++ Sbjct: 113 KIAKEVSEAFYTLFSNPVYRDKIKYVEVKGHTDNTFL---ADYNRFLSTNRAASFVNAMV 169 Query: 301 KSGVSEDRISKI---SGFAHHRLKIASDPMNS-----ANRRIDILVE 339 +G + + SG + K+ S S NRRI+I +E Sbjct: 170 PNGSKYEEYAAYFKSSGMSKFEPKVGSVDGQSMVEQDQNRRIEINIE 216 >gi|300728164|ref|ZP_07061535.1| putative immunoreactive 43 kDa antigen PG32 [Prevotella bryantii B14] gi|299774590|gb|EFI71211.1| putative immunoreactive 43 kDa antigen PG32 [Prevotella bryantii B14] Length = 378 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 48/155 (30%), Gaps = 21/155 (13%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 + + +N + N L+ + + K++ DL + + Sbjct: 216 RDQNEIDGLNNQINSLRSDLNDKDAQLSAKDKKIADLQNALDECQKKPKKAATATNLQPT 275 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPF 277 +F + S ++ I + + E + I+G+ Sbjct: 276 ----------------VLFRQGKSSIDKAQYAPIELIASYMKNHPEANVEIKGYASPE-- 317 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISK 311 A N +LS RA + L+K +S DR+ Sbjct: 318 -GNAEFNQKLSQARAEAVKNALVKKYKISADRLKA 351 >gi|46398697|gb|AAS92034.1| IcmN protein [Legionella pneumophila] Length = 166 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI + +F S + +L +I L Sbjct: 27 DATIIKMMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLHWASYSLLNEIATFL 83 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 84 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 139 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 140 KPITSYTLGGD--RSPNARVEITFRR 163 >gi|227536735|ref|ZP_03966784.1| outer membrane protein [Sphingobacterium spiritivorum ATCC 33300] gi|227243427|gb|EEI93442.1| outer membrane protein [Sphingobacterium spiritivorum ATCC 33300] Length = 394 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 7/134 (5%) Query: 188 RKKRLQDLAKKISS--TLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPL 245 ++ L L ++++ + +++ + + T + +++ F +S Sbjct: 243 DEEELNALRRRVNELAANNDVLSKQLEEAGNKSMTNVVVNKNVLAAPILVTFKIGTSEIS 302 Query: 246 PETIVVLQKIGEVLAHSTEV--ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS- 302 ET V L +V+ I G+ D N RLS+ RA + +L+ Sbjct: 303 NETRVNLGFFAKVIKEGDAQVIYRITGYAD--KGTGTPEINQRLSIARAEAVKSILVNEF 360 Query: 303 GVSEDRISKISGFA 316 V +++ ++ Sbjct: 361 AVPARQLTTVAAGG 374 >gi|332300026|ref|YP_004441947.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] gi|332177089|gb|AEE12779.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707] Length = 325 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 59/196 (30%), Gaps = 9/196 (4%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 N + +G D K++ +E + + ++L L +++ Sbjct: 133 PAGSNLVVTQGAQGALPTNDADKIKALEEELARLKAAQQNPQRDDDQIAQQLAALRNQLN 192 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEV-L 259 + + + + F +S + E ++ + + + Sbjct: 193 ELEKASEKAPVYNYDNRRVIHQDRSRNNVQLSRSVFFKVNSDVLNAEGREAVRNVADFVI 252 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHR 319 ++ + G+ N +L+ RA S + L ++GV I + Sbjct: 253 NDPRALVLVYGYAS---IDGPVDFNNKLAAKRAASVIKALQEAGVPAAAIKRYDNGVDTT 309 Query: 320 LKIASDPMNSANRRID 335 +D RR+D Sbjct: 310 PAKRTDA-----RRVD 320 >gi|90579803|ref|ZP_01235611.1| hypothetical protein VAS14_16496 [Vibrio angustum S14] gi|90438688|gb|EAS63871.1| hypothetical protein VAS14_16496 [Vibrio angustum S14] Length = 342 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 9/104 (8%) Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + L ++ + + E I G D A+ N ++S +RA + + Sbjct: 244 GQTKLNDYGRYNLGEVIATMQANPEVNAQIIGRADKV---GSAKVNEKVSAERAANVAKY 300 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVE 339 L +G+ R+ +S ++ +D N R + I+++ Sbjct: 301 LEANGIDASRL-TVSSVGYNNPL-KTDAATKTNYVQRSVQIILK 342 >gi|46398715|gb|AAS92043.1| IcmN protein [Legionella pneumophila] Length = 176 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 48/137 (35%), Gaps = 14/137 (10%) Query: 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-IS 267 D KG+ + LISI + +F S + +L ++ L ++ I+ Sbjct: 46 DLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEVAAFLKQFRKIAIT 102 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA---- 323 + ++ R L+L R+ + L GV RI G + + Sbjct: 103 VTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSDKPITSYTLG 158 Query: 324 SDPMNSANRRIDILVED 340 D S N R++I Sbjct: 159 GD--RSPNARVEITFRR 173 >gi|46398689|gb|AAS92030.1| IcmN protein [Legionella pneumophila] Length = 189 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +T+ ++ D KG+ + LISI + +F S + +L +I L Sbjct: 50 DATIIKMMTDLNKKGIKVASVGQNDLISI---PASALFXDQSPRLNWASYSLLNEIAAFL 106 Query: 260 AHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH 318 ++ I++ ++ R L+L R+ + L GV RI G Sbjct: 107 KQFRKIAITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSD 162 Query: 319 RLKIA----SDPMNSANRRIDILVED 340 + + D S N R++I Sbjct: 163 KPITSYTLGGD--RSPNARVEITFRR 186 >gi|229903070|ref|ZP_04518186.1| Outer membrane protein [Yersinia pestis Nepal516] gi|229679980|gb|EEO76080.1| Outer membrane protein [Yersinia pestis Nepal516] Length = 71 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILV 338 +L S VS + G+ R +D + NRR++I + Sbjct: 1 MLSTSDVSPT-CFAVQGYGATRPIADNDTPDGRALNRRVEISL 42 >gi|157960285|ref|YP_001500319.1| OmpA domain-containing protein [Shewanella pealeana ATCC 700345] gi|157845285|gb|ABV85784.1| OmpA domain protein transmembrane region-containing protein [Shewanella pealeana ATCC 700345] Length = 346 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 5/118 (4%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDN 284 I +F SS L ++ ++ +VI + G +D ++ N Sbjct: 228 IHTEKSSVAVLFGFDSSELNSTAKAKLDQVIKLSKSKDQDVILLNGQSDNQ---GDSQYN 284 Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQ 342 +LS R L+ GV +I + RR+ + + ++ Sbjct: 285 LKLSEKRVQHVEAYLVSHGVEVKKIDT-QAVGEQDAHANLRKDRALERRVIVTLTSQE 341 >gi|218261428|ref|ZP_03476249.1| hypothetical protein PRABACTJOHN_01915 [Parabacteroides johnsonii DSM 18315] gi|218224038|gb|EEC96688.1| hypothetical protein PRABACTJOHN_01915 [Parabacteroides johnsonii DSM 18315] Length = 214 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 16/156 (10%) Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKR-LQDLAKKISST-- 202 +L RD+ + ++ S N E L L +K+ + ++R + +L I++ Sbjct: 61 ALERDTTRMGKNIRNYQNMLSTNMTEQEKLNSLLSQKMSELDERERTINELQDMINAQTE 120 Query: 203 --------LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQK 254 + + + + +++ D+ +F+ S+ L K Sbjct: 121 RVQNLLNSVKDALLGFSSDELTVREKDGKVYVAMSDKL---LFESGSARVDKRGKEALAK 177 Query: 255 IGEVLAHSTEVI-SIRGHTDASPFRNIAR-DNWRLS 288 + EVL +++ I GHTD+ P DNW LS Sbjct: 178 LAEVLNKQSDIDVYIEGHTDSKPINTAQFKDNWDLS 213 >gi|255608876|ref|XP_002538967.1| conserved hypothetical protein [Ricinus communis] gi|223509514|gb|EEF23416.1| conserved hypothetical protein [Ricinus communis] Length = 313 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 9/123 (7%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSI-PL 245 +R+ D+ K + + L A V + + T FD+ Sbjct: 192 ASAQRVDDVTKTLPQIDAALAACMPPVAVQPVGLPPKLTLE---GDATFAFDRGDIAGLS 248 Query: 246 PETIVVLQKIGEVLAHSTEVI--SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 P L+++ + + +V + G+TD N RLS RA + + L +G Sbjct: 249 PAGKARLEQLIRDMKQAGDVTAIRVEGYTDRL---GGDALNRRLSAARAETVRRYLAANG 305 Query: 304 VSE 306 + Sbjct: 306 IDA 308 >gi|311746524|ref|ZP_07720309.1| putative outer membrane protein [Algoriphagus sp. PR1] gi|126575424|gb|EAZ79756.1| putative outer membrane protein [Algoriphagus sp. PR1] Length = 777 Score = 51.1 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 85/291 (29%), Gaps = 27/291 (9%) Query: 56 ATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKI 115 + + F + ++ + + + + Sbjct: 508 TFTKEEFDEELEKFRSEMLQAQAKRDSAMLMAFASKIPTEEEENSRARNRDNEEDPQEVL 567 Query: 116 GSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFL 175 +T+ + + + L G ++ + S +K+E Sbjct: 568 INTDGIDDKTAKKLEKNRKKQEKLEKKNNELLKDALLIGGTAAATSAINNSGDKKEAAAQ 627 Query: 176 PPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTP 235 + + L D + I + + + + + Sbjct: 628 AAYDSALLAKIALDSMLIDSLRNIPPVIDTVEIEKPTPQ------------FLSSSKVEL 675 Query: 236 MFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD + + P E I L + E L ++ E + + G D + N +++ R S Sbjct: 676 YFDINMTEPSEEEIQKLDPVIEYLTNNPEVKVELIGFADNT---GSISYNLKITEKRVES 732 Query: 295 AYQVLMKS-GVSEDRISKISG----FAHHRLKIASDPMNSANRRIDILVED 340 ++L +SEDRI K +G + + +D R+++I + + Sbjct: 733 VTEILTSKFQISEDRILKNNGGLIIRGSTKGSVKND------RKVEIRILN 777 >gi|323137327|ref|ZP_08072405.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242] gi|322397314|gb|EFX99837.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242] Length = 559 Score = 51.1 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/200 (10%), Positives = 63/200 (31%), Gaps = 11/200 (5%) Query: 136 NSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDL 195 + ++E + + ++ + ++ + + +++ L Sbjct: 357 AANEAEPLAVADALVEAASPYRVEREVSIVALASQTQEMRAGETRAAATLQEAQAQIETL 416 Query: 196 AKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVV-LQK 254 ++ T + L + + + F + ++ P L + Sbjct: 417 RAELKETRASLDRYLAQD------EAPHVKLRRFVETFAVFFTELDTLSNPAATAKGLDE 470 Query: 255 IGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISG 314 + ++ S + + G+ D A N S RA +L++ GV R++ + Sbjct: 471 LAGLMKASGANLRVVGYADEV---GSATLNRAASRKRADKIVSMLVERGVPRQRLALVP- 526 Query: 315 FAHHRLKIASDPMNSANRRI 334 + ++ +RR+ Sbjct: 527 RSTLDPIADTEFDAIRSRRV 546 >gi|313141693|ref|ZP_07803886.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313130724|gb|EFR48341.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 241 Score = 51.1 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 57/190 (30%), Gaps = 24/190 (12%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 L + E + K+ + + + + L + K + ++ + Sbjct: 18 QKELALQNAELLALNKQMSDVAKTHQNLQTELYKDLVAEFSKDLGKWNAEIDEDNTVRFR 77 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGE---------VLAHSTEVISIRGHTD-----ASPF 277 +FD+ +L E I I GHT A Sbjct: 78 EPDILFDQGEKEVKSRFKEILDDFFPRYIKILSRPQYKEDIEEIRIEGHTSKEWKNAKSL 137 Query: 278 RNIARDNWRLSLDRAYSAYQV-LMKSGVSEDR-----ISKISGFAHHRLKIASDPMNSAN 331 + N LS RA + +++ + + + +G + + +++ + Sbjct: 138 EDRYLGNAELSQARALEVLKYCFNNQQIAKQKEWLVSVLRANGLSFAKPLESAE----LS 193 Query: 332 RRIDILVEDR 341 RR++ V + Sbjct: 194 RRVEFKVLTK 203 >gi|42522454|ref|NP_967834.1| outer membrane protein [Bdellovibrio bacteriovorus HD100] gi|39574986|emb|CAE78827.1| outer membrane protein [Bdellovibrio bacteriovorus HD100] Length = 368 Score = 51.1 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 54/157 (34%), Gaps = 15/157 (9%) Query: 185 AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIP 244 A ++++ + I+ A + + + I + F S Sbjct: 205 AAAEPTVMEEVQEDITYQERVEPARPVAAVEAGSALKDVNMNMIAGAGSAIQFRSSQYAI 264 Query: 245 LPETIVVLQKIGEVLAHSTE---VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 LQ++ +VL + + + I G+ DA+ N R+S RA S +L + Sbjct: 265 SGADNRKLQQVAKVLNENPDLVERVEIHGYADAT---GTDEINQRISQARADSVKNILER 321 Query: 302 SGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDIL 337 +G + + G S +RR +++ Sbjct: 322 NGF--TNVEAV-GKG-----ATDSTGIRSQDRRAELV 350 >gi|169836490|ref|ZP_02869678.1| hypothetical protein cdivTM_05195 [candidate division TM7 single-cell isolate TM7a] Length = 349 Score = 51.1 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 5/70 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI--RGHTDASPFRNIARDNWRLSLDRAYS 294 F +P L+ I V+ + SI GHTD++ A N +LS+ RA + Sbjct: 239 FKVDGRVPNEGEAADLRTIAGVINQFADGGSIDFVGHTDST---GSAAYNQKLSVARAQN 295 Query: 295 AYQVLMKSGV 304 ++L G+ Sbjct: 296 VARLLRDYGL 305 >gi|46202522|ref|ZP_00053085.2| COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Magnetospirillum magnetotacticum MS-1] Length = 164 Score = 51.1 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 13/105 (12%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAH-STEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ + + T+ VL + L +I I+G TD+ A N LS RA + Sbjct: 61 FNHAKADITGSTMQVLWGLAPALKAAEPGLIRIQGFTDS---SGKAAYNQVLSEKRAQAV 117 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDIL 337 + L K G++ +++G + + RR++I Sbjct: 118 AEQLRKLGITAR--IEVTGQG----IVKGGKKGQKDQGARRVEIT 156 >gi|307944849|ref|ZP_07660187.1| conserved hypothetical protein [Roseibium sp. TrichSKD4] gi|307772063|gb|EFO31286.1| conserved hypothetical protein [Roseibium sp. TrichSKD4] Length = 310 Score = 51.1 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 82/297 (27%), Gaps = 17/297 (5%) Query: 20 KVAIDDTPNNLGSWKIVYAD-FMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMT 78 + A ++ N+ + D T++M ++ I+ + I + + Sbjct: 3 RRAAEEAENHWPG----FVDALSTIVMVVTFLLIILAVAIFVLSQNIAKSYIETHSAKTE 58 Query: 79 ASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG------STNQKKQYQRLENNIF 132 G + +P + + D ++ + + + T Sbjct: 59 QGGGDKMDPDPGSATKEFMGDKKVEAPVPDTATEKMTEAPPPPVPTEPDPTVTPQPQEPV 118 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 + + D+ KS +S + + L + + Sbjct: 119 TQPPAPTTSATAPQSLSDTPNENTAPKSPGKTQSKDTFNSQLAEELKGNDDVEEDTDLSI 178 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 I + + + T + I +ID F +S + Sbjct: 179 LSRKVPIEEKRIVVAPQDKTEQPKASTVQKAQTILVID------FQSASVKMDEAAANEI 232 Query: 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 +K + + + + + SP R++ RA +A L+ SG + I Sbjct: 233 RKFSQTNSAILKDQKVTVWSFTSPAEGSVSQAKRVAYYRALAARNNLLSSGTPPENI 289 >gi|332304686|ref|YP_004432537.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172015|gb|AEE21269.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 589 Score = 51.1 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 68/259 (26%), Gaps = 20/259 (7%) Query: 67 QYFNPFGKNLMTASKGIFDEQNPPERS----SQNKIDLSIDEHITKNSVDLKIGSTNQKK 122 F + LM +Q + + ++ I + + Sbjct: 307 TSFYAYKLWLMQGYVNQVQTLQQEPGIMLIRAQRDGIQQVILDVLRDPNAQPINTWLASR 366 Query: 123 QYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + N+ S + R TD ++ E Sbjct: 367 EIPAEVINLTEKSFLSLESQIVRARLRGLLSNYPAIAITDDGNTLAGELTQQQHHALSAD 426 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 + + Q L I + + T + IS+I + F +S+ Sbjct: 427 LAQLPGVTDPQSLLAPIQISDKQTLELGAKDSA---MTLIKLKISLI-NSTSVEFASNST 482 Query: 243 IPLPETIVVLQKIGEVLA---------HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 P+ L + I G +DA + N LS+ RA Sbjct: 483 QLSPQAEQSLASLASHAKALLSLAGQAQLDVSFIIIGASDA---KGSQSYNEVLSIKRAQ 539 Query: 294 SAYQVLMKSGVSEDRISKI 312 + L + G+ D+++ I Sbjct: 540 TVRDTLQEYGLPSDKLNAI 558 >gi|237741814|ref|ZP_04572295.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|229429462|gb|EEO39674.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] Length = 233 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 61/190 (32%), Gaps = 37/190 (19%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 ++K+K K ++ + I L+ +++ K +SI + Sbjct: 35 QVNKQKEHIEVIAKDFKNTKQSIYKDLNKEFEEDLKKW---NAYIDKDTLSITFKEPDVF 91 Query: 237 FDKSSSIPLPET--------IVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-----ARD 283 F+ SS ++ + + E I I GHT + ++ Sbjct: 92 FEVGSSEINDNFKVVLKDFFPRYIEMLYKNYKDEIEEIRIEGHTSSEWNKDDDNLQAYFK 151 Query: 284 NWRLSLDRAYSA-------------YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-S 329 N LS RA S L++ + +G ++ I N + Sbjct: 152 NMSLSQARARSVLEYCMLLDSMENYRDFLIEK-------ATANGLSYSHRIIEDGKENYN 204 Query: 330 ANRRIDILVE 339 +RR++ ++ Sbjct: 205 KSRRVEFKIK 214 >gi|217970277|ref|YP_002355511.1| OmpA/MotB domain protein [Thauera sp. MZ1T] gi|217507604|gb|ACK54615.1| OmpA/MotB domain protein [Thauera sp. MZ1T] Length = 756 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 16/114 (14%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-------ISIRGHTDASPFRNIARDNWRLSL 289 FD S I L + + I GHT A N LS Sbjct: 505 FDYDSDALTGTAIATLNGFIARFNGAVGNAAHQEVRVEIVGHTSA---AGSEHYNVDLSR 561 Query: 290 DRAYSAYQVLMKSGVS--EDRI-SKISGFAHHRLKIASDPMNSANRRIDILVED 340 RA + L + G + +R+ + G A + P ++++R D++V+ Sbjct: 562 RRAEAVRTHLERHGFANTANRVHIRARGEAEADP---TQPRRASDQRADLVVDG 612 >gi|223938134|ref|ZP_03630031.1| peptidoglycan-associated lipoprotein [bacterium Ellin514] gi|223893178|gb|EEF59642.1| peptidoglycan-associated lipoprotein [bacterium Ellin514] Length = 214 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 7/111 (6%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD L ++ L + + G+ D N L RA Sbjct: 107 VYFDFDKFSIRSSDQSKLSEVANYLKSHPGTAVRVEGNCDER---GTEEYNRSLGERRAL 163 Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIA--SDPMNSANRRIDILVEDRQ 342 +A + L GV + +S F + + + + NRR + +V + Sbjct: 164 AAREALATMGVDPTLVETVS-FGEDKPAVPGHDESAYAKNRRDEFVVLNPP 213 >gi|109675220|gb|ABG37059.1| outer membrane protein A [Acinetobacter baumannii] Length = 282 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 218 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 274 Query: 293 YSAYQVLM 300 S L+ Sbjct: 275 NSVKSALV 282 >gi|108761445|ref|YP_635359.1| hypothetical protein MXAN_7246 [Myxococcus xanthus DK 1622] gi|108465325|gb|ABF90510.1| hypothetical protein MXAN_7246 [Myxococcus xanthus DK 1622] Length = 244 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 30/95 (31%), Gaps = 21/95 (22%) Query: 268 IRGHTDASPFRN--------------IARDNWRLSLDRAY----SAYQVLMKSGVSEDRI 309 + GHTD PF +N R S RA + L +G D Sbjct: 147 LEGHTDDRPFLGTSWECGVREGVARYSFENNVRASAARAQEVFFTVRNQLRDAGYERDCF 206 Query: 310 SK---ISGFAHHRLKIASDPMNSANRRIDILVEDR 341 +SG + +D NRR+ I V Sbjct: 207 DSNFVVSGRGQTAPRPGTDGSEPENRRLVIRVRGD 241 >gi|254427536|ref|ZP_05041243.1| OmpA family protein [Alcanivorax sp. DG881] gi|196193705|gb|EDX88664.1| OmpA family protein [Alcanivorax sp. DG881] Length = 212 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 19/120 (15%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISI-RGHTDASPFRNIARDNWRLSLDRAYSA 295 F S++ + + L+ + +A + + G++D A N L+ RA + Sbjct: 99 FAFDSAVLTDASRIALKAWYQEVASLEGPVVVVNGYSDPL---GGAAYNLALAERRAQAV 155 Query: 296 YQVLMKS--GVSEDRISKISGFAHHRLKIASDPMN----------SANRRIDILVEDRQG 343 Q + G+++ + G +RR+ +LV+ G Sbjct: 156 AQWWRQQGEGIAD---VTVIGHGEDHSVTGDRCKALRGDALKQCHQQDRRVQLLVKMGSG 212 >gi|110589616|gb|ABG77310.1| outer membrane protein A [Acinetobacter baumannii] Length = 286 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 217 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 273 Query: 293 YSAYQVLMKS 302 S L+ Sbjct: 274 NSVKSALVNE 283 >gi|313159176|gb|EFR58549.1| OmpA family protein [Alistipes sp. HGB5] Length = 402 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 17/109 (15%) Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAH--STEVISIRGHTDASPFRNIARDNWRLS 288 + +FD S S+ P+ L+ I E + V I GH D A N R++ Sbjct: 299 DTSIILFDYSMSVLTPQEKTRLELIAEQIKSGSKDAVYQIVGHADQQ--TGTAAGNKRVA 356 Query: 289 LDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-----NSANR 332 RA Y L+ GV+ +++ G + P +ANR Sbjct: 357 EHRAKRVYDFLVSKGVNPKQLN-YEGKG-------NSPDPFKKVQAANR 397 >gi|86143302|ref|ZP_01061704.1| ATP phosphoribosyltransferase [Leeuwenhoekiella blandensis MED217] gi|85830207|gb|EAQ48667.1| ATP phosphoribosyltransferase [Leeuwenhoekiella blandensis MED217] Length = 239 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 64/183 (34%), Gaps = 12/183 (6%) Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 +S D K ++ L ++RL+ + I L + K Sbjct: 63 ESEDASKKRGIYQDSSFAETGNYDALINNIQERLERNQRAIEEDEERLRLAKLNKKSKAS 122 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPF 277 T D P F + + + L ++ L + I I GHTD Sbjct: 123 KTPRPEA----DLTFRPSFKLARLVHDQKAAEFLAQVERQLKINPLTQIEIIGHTDHI-- 176 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMN--SANRRI 334 RDN++++L++A Q ++KS + E+++ S + + N R Sbjct: 177 -GDDRDNYKIALEQAQKIRQFIIKSFNLPENQVIATS-KGEADPLYPREMEDKIELNNRY 234 Query: 335 DIL 337 +++ Sbjct: 235 ELI 237 >gi|326794508|ref|YP_004312328.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] gi|326545272|gb|ADZ90492.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1] Length = 723 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 63/206 (30%), Gaps = 2/206 (0%) Query: 111 VDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKE 170 D + ++ I S E + S + Sbjct: 492 PDAQKVTSWLGDVVSSELITINERRFSAYDERLIPRRLARIDAAFPNVAFDAQSHSFSGV 551 Query: 171 ENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIID 230 + + I ++ + + + +S + + + ++ + R L S+ Sbjct: 552 LSAPKFDQLRSAIQRIQELVEVDSVLRGVSIKSQRVDSGVSNELLIEQQIREVELSSVPF 611 Query: 231 QRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 N + S + + ++ E LA + + S N +LSLD Sbjct: 612 DVNASQLPSNHSDLIKSLSREITRLAE-LAKVLDQRLLVVVMGTSTLGGTDSYNQQLSLD 670 Query: 291 RAYSAYQVLMKSGVSEDRISKISGFA 316 RA S + L+ GVS + I + +G Sbjct: 671 RADSVIKALISEGVSPE-ILRTAGLG 695 >gi|315607436|ref|ZP_07882432.1| possible major outer membrane protein OmpA [Prevotella buccae ATCC 33574] gi|315250868|gb|EFU30861.1| possible major outer membrane protein OmpA [Prevotella buccae ATCC 33574] Length = 382 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 54/163 (33%), Gaps = 14/163 (8%) Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 L + + + L +++ + + + + + + F+ + Sbjct: 230 DALKAQYQNEIDGLRNQLNDANAENDRLRNMLANQPKAETPAAVKEFVQTPISVFFNLNK 289 Query: 242 SIP-LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLM 300 + + +V +Q + + + + + G+ D+ N LS +RA + L Sbjct: 290 TNIASQKDLVNVQALAKYAKENNSKLLVNGYADS--ATGKPAHNQWLSEERAKTVAGELQ 347 Query: 301 KSGVSEDRISKISGFA---HHRLKIASDPMNSANRRIDILVED 340 K G++ I+ G S NRR + V + Sbjct: 348 KMGINSSNITT-KGNGGVDELSPI-------SFNRRATVQVTE 382 >gi|220919231|ref|YP_002494535.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219957085|gb|ACL67469.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 357 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%) Query: 267 SIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP 326 + DA+P RLS A +A L + GV+E R+S + G R + + Sbjct: 284 RVEAFVDATPDAQAD---QRLSQAMADAAVGRLRELGVAERRLSGV-GCGGERPLLPNFT 339 Query: 327 MNSA--NRRIDIL 337 + NRR++I+ Sbjct: 340 VRGRTANRRLEIV 352 >gi|257454660|ref|ZP_05619916.1| OmpA/MotB [Enhydrobacter aerosaccus SK60] gi|257447970|gb|EEV22957.1| OmpA/MotB [Enhydrobacter aerosaccus SK60] Length = 404 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 12/119 (10%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 + + R + F + I E A + I I G+TD++ A N Sbjct: 278 VVFENGRLSFYFATGKAQVAGNAKEKANDILEA-AKQGKKIGISGYTDST---GNAAANE 333 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQ 342 +L+ +RA + L+ +GV + ++ I + + + + RR+D + D Sbjct: 334 KLAKERAQAVRSFLVANGVPQSQLELI------KPQDTTGAAGKDQEGRRVDAYIVDDN 386 >gi|88811687|ref|ZP_01126941.1| hypothetical protein NB231_04760 [Nitrococcus mobilis Nb-231] gi|88791078|gb|EAR22191.1| hypothetical protein NB231_04760 [Nitrococcus mobilis Nb-231] Length = 237 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 49/180 (27%), Gaps = 24/180 (13%) Query: 179 SKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFD 238 + + ++ ++ + D + D +F+ Sbjct: 46 QERDQIREIAVAYQENQVAIYNALMKEFKDDLAHWNASIDRDSLAFRFKSPD----VLFE 101 Query: 239 KSSSIPLPETIVVLQKIGEV-------LAHSTEVISIRGHTDASP-----FRNIARDNWR 286 S+ P +L+ S + + I GHT ++ N Sbjct: 102 VGSAEIRPRFKDILEDFFPRYLGILKGFKDSIDEVRIEGHTSSTWNQRVTDTKAYFLNME 161 Query: 287 LSLDRAYSAYQVLMK----SGVSE--DRISKISGFAHHRLKI--ASDPMNSANRRIDILV 338 LS R S Q + + G R GF+ R + + +RR+ V Sbjct: 162 LSQGRTRSVLQHVYRMPSIRGDQPWVQRQFAAVGFSSSRPILRPDGKEDRAHSRRVTFRV 221 >gi|88799106|ref|ZP_01114686.1| ompA family protein [Reinekea sp. MED297] gi|88778089|gb|EAR09284.1| ompA family protein [Reinekea sp. MED297] Length = 1048 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 4/63 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVI-SIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD SS P + L K+ +L +T+ I GHTD N LS RA S Sbjct: 290 FDFDSSFLKPTMLNGLVKLERLLKENTDYKVQIVGHTD---LVGGNDYNMSLSERRARSV 346 Query: 296 YQV 298 Sbjct: 347 LAY 349 >gi|167643943|ref|YP_001672041.1| hypothetical protein pTer331_15 [Collimonas fungivorans] gi|166863235|gb|ABZ01491.1| hypothetical protein [Collimonas fungivorans Ter331] Length = 186 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 58/175 (33%), Gaps = 8/175 (4%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + S + + L +++ + L + + + Sbjct: 15 ACSSPPKPPVVDGSNRHAVNTPETAEVIALRAQLAQSEEKLRVEQARPVIAPAVLQPAPP 74 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 + + F +++ Q + L I +RG TD Sbjct: 75 PPARSRTFSVHFPYNNTNFHLSADDSAQLLP--LLAKARRIEVRGRTDGQRPSTADE--- 129 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 +++L+RA +A + L+ GVS I ++ + + S NRR+DI V Sbjct: 130 KIALNRALAAQRFLIGQGVSPA-IISVNYVSAGDYVADNFSAVGRSLNRRVDIEV 183 >gi|254966498|gb|ACT97225.1| TraQ [Synthetic plasmid pMOL98] Length = 186 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 58/175 (33%), Gaps = 8/175 (4%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + S + + L +++ + L + + + Sbjct: 15 ACSSPPKPPVVDGSNRHAVNTPETAEVIALRAQLAQSEEKLRVEQARPVISPAVLQPAPP 74 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 + + F +++ Q + L I +RG TD Sbjct: 75 PPARSRTFSVHFPYNNTNFHLSADDSAQLLP--LLAKARRIEVRGRTDGQRPSTADE--- 129 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 +++L+RA +A + L+ GVS I ++ + + S NRR+DI V Sbjct: 130 KIALNRALAAQRFLIGQGVSPA-IISVNYVSAGDYVADNFSAVGRSLNRRVDIEV 183 >gi|209519812|ref|ZP_03268597.1| cytochrome c oxidase, subunit II [Burkholderia sp. H160] gi|209499755|gb|EDZ99825.1| cytochrome c oxidase, subunit II [Burkholderia sp. H160] Length = 535 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 57/163 (34%), Gaps = 19/163 (11%) Query: 180 KEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDK 239 + K +A R +L + ++ + G + + + FD Sbjct: 382 QPKQVADARNGKLPEGGDHLAEAGAAASGAAAASGAEAASAPAASDNAAATLPASVYFDT 441 Query: 240 S-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S++P V AH ++ G TDA+ A N +L+ RA + Sbjct: 442 GKSTLPADAKAAVDAAAAYAKAHPDAKFTLSGFTDAT---GSADVNAKLAKSRAEAVRDA 498 Query: 299 LMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +G++ED I I+G +D + RR+ I Sbjct: 499 LKAAGIAEDHIILKKPETITG--------GTDAKEA--RRVQI 531 >gi|257456384|ref|ZP_05621580.1| OmpA family protein [Treponema vincentii ATCC 35580] gi|257446044|gb|EEV21091.1| OmpA family protein [Treponema vincentii ATCC 35580] Length = 175 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 41/158 (25%), Gaps = 6/158 (3%) Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 K+ K + + + + + E + T F + Sbjct: 20 ASQPKQPKEEKPVVQTQQAETAPAEEKTAEPEKAPEQQPQRNTNNNAGTETTVYFAPKTY 79 Query: 243 IPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 T L I E L I I GH +LSL RA + + Sbjct: 80 TIDTFTAHKLDGIAEQLKAKDVTQIKIVGHCAKMDSTKDEE---KLSLQRALAVARYFES 136 Query: 302 SGVSEDRISKISGFAHHRLKIASD--PMNSANRRIDIL 337 +G ++ + NRR++I Sbjct: 137 TGAFTADNMTVAAEGAQHPAGSHAEISERKHNRRVEIY 174 >gi|2895292|gb|AAC38192.1| DotK [Legionella pneumophila] Length = 134 Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 50/140 (35%), Gaps = 14/140 (10%) Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEV 265 ++ D KG+ + LISI + +F S + +L +I L ++ Sbjct: 1 MMTDLNKKGIKVASVGQNYLISI---PASALFADQSPRLNWASYSLLNEIAAFLKQFRKI 57 Query: 266 -ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA- 323 I++ ++ R L+L R+ + L GV RI G + + Sbjct: 58 AITVTSYSSKYVSVKRER---ALTLARSRVVSEYLWSQGVD-SRIIFTQGLGSDKPITSY 113 Query: 324 ---SDPMNSANRRIDILVED 340 D S N R++I Sbjct: 114 TLGGD--RSPNARVEITFRR 131 >gi|171057549|ref|YP_001789898.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6] gi|170774994|gb|ACB33133.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6] Length = 230 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 26/221 (11%), Positives = 63/221 (28%), Gaps = 18/221 (8%) Query: 126 RLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILA 185 + + +E + S + + + + Sbjct: 4 PTLALSLAAALLLGACDAPPKPPAVNETTRRPANSAWVVDLQSCRSELANTRIDAAESAR 63 Query: 186 MKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILIS--IIDQRNTPMFDKSSSI 243 L+ + V + + + + + T FD SS Sbjct: 64 RADFAMATADRMVALQQAIELIKPSSPASVAIASPTSIREVMQPLANSIYTVQFDYGSSR 123 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + + + A + ++ +RG TD + R++ +RA + L+ +G Sbjct: 124 VNLAPTFLRAVLDQ--ARTAPLVVLRGRTDGTQDVAAEG---RIARERAQAVKSHLVAAG 178 Query: 304 VSEDRISKISGFAHHRL----KIASDPMN--SANRRIDILV 338 + +RI + + + + NRR++I V Sbjct: 179 LDPNRIRTT-----WQPTGDHAADNGTPDGQARNRRVEIEV 214 >gi|124516388|gb|EAY57896.1| putative outer membrane protein, OmpA/MotB family [Leptospirillum rubarum] Length = 232 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 4/80 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + F +S + VL +L + + + GHTD +R N +L L+ Sbjct: 104 QKDIYFSFNSKKISYANLSVLHAYSRLLRKNPRLALRLYGHTDPV---GSSRFNHKLGLE 160 Query: 291 RAYSAYQVLMKSGVSEDRIS 310 RA +A +VL+ +GV RI Sbjct: 161 RALAARRVLLATGVPAKRIF 180 >gi|218508705|ref|ZP_03506583.1| hypothetical protein RetlB5_14646 [Rhizobium etli Brasil 5] Length = 56 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDRQ 342 SL RA +A +++ R+ + G ++ + NRRI I++ Q Sbjct: 1 SLARASAAAEIIKSMMDDPGRV-REEGRGSGEPVASNHTPEGRARNRRIQIIITKTQ 56 >gi|329119291|ref|ZP_08247978.1| cytochrome c oxidase, subunit II [Neisseria bacilliformis ATCC BAA-1200] gi|327464638|gb|EGF10936.1| cytochrome c oxidase, subunit II [Neisseria bacilliformis ATCC BAA-1200] Length = 223 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 18/200 (9%) Query: 141 EHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKIS 200 E + + D + ++ + E+ + L + + ++++ +A+ Sbjct: 37 ETGRIEGSPDYGRAASQEEAGQPAPTPQGGEDTGVVILLDKGEAPAQVPEQVEFVAEPDD 96 Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLA 260 + + + I+ F S L+ + A Sbjct: 97 APAAAPENAPAPQQPAAAQDEAKIVAQ--GGVVKFYFATGKSDVPSGAQEALKDVLVA-A 153 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRL 320 + + + G+ D++ A N LS RA + VL GV + +I L Sbjct: 154 LGGKKVVVSGYHDST---GNAAFNEELSKQRALAVRAVLQGFGVPDKQI---------EL 201 Query: 321 KIASDPMNS---ANRRIDIL 337 + + RR+++ Sbjct: 202 RKPENTEAGSGEEARRVEVF 221 >gi|27381673|ref|NP_773202.1| hypothetical protein blr6562 [Bradyrhizobium japonicum USDA 110] gi|27354842|dbj|BAC51827.1| blr6562 [Bradyrhizobium japonicum USDA 110] Length = 389 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 73/231 (31%), Gaps = 13/231 (5%) Query: 105 HITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLE 164 VD G Q Q Q E + +++ + + L + + Sbjct: 134 DQGDQQVDPLPGLDAQGHQQQLPEGRGRRGVSMMRAKGLTTAGLGIALGMALLAGAASAQ 193 Query: 165 KSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGI 224 + ++ E+ + Q + ++ + + + + + Sbjct: 194 TTPPTRDDIVGKLNHFEEAAEIDLPALKQQVMERAKARIKNDPGPVNRPPIAPDLAK--- 250 Query: 225 LISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAH---STEVISIRGHTDASPFRNIA 281 + FD + I P + + +I + L H I GH +++ Sbjct: 251 ---LPAFNAQIQFDADTPIIQPASYQTVGRIADALVHASLLPYTFLIVGHVESN--AKTR 305 Query: 282 RDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFAHHRLKIASDPMNSAN 331 N LS RA + VL+ + +S R+ I G + + P ++AN Sbjct: 306 EANAILSQRRADAIRDVLVNTFKISTKRLHPI-GLGEEQFLDRAKPTSAAN 355 >gi|332653291|ref|ZP_08419036.1| OmpA family protein [Ruminococcaceae bacterium D16] gi|332518437|gb|EGJ48040.1| OmpA family protein [Ruminococcaceae bacterium D16] Length = 213 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 18/152 (11%) Query: 203 LSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF--DKSSSIPLPETIVVLQKIGEVLA 260 + G + V E MF + + + L+ + EV+ Sbjct: 55 IHGPEEQSAAGSVTVEEEPLVFETPFELNSTQVMFKAESDAFLDEAAAKEALKPVAEVIL 114 Query: 261 HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSEDRISKISGFA-HH 318 + + T A+ + LS RA + +L+ + GV E++++ I G Sbjct: 115 AHPDHPILLAGTTATD--GDQQARVDLSNRRAAAVKNLLVSAFGVPENQLTTI-GLGFEA 171 Query: 319 RLKIAS----------DPMNSANRRIDILVED 340 + + + NRR+ I+++ Sbjct: 172 DPFVRGQDRDANGKFVESEGAKNRRV-IVMDA 202 >gi|312130909|ref|YP_003998249.1| thrombospondin type 3 repeat-containing protein [Leadbetterella byssophila DSM 17132] gi|311907455|gb|ADQ17896.1| Thrombospondin type 3 repeat-containing protein [Leadbetterella byssophila DSM 17132] Length = 571 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 67/253 (26%), Gaps = 10/253 (3%) Query: 73 GKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIF 132 +L KG+ Q P+R D + + G + +++ Sbjct: 309 KDDLCIDVKGLASLQGCPDRDGDGVADKDDACPDQAGTAN---GCPDSDGDGIADKDDAC 365 Query: 133 YLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRL 192 S + D + + + L Sbjct: 366 PYSAGTAELNGCPDSDGDGVVDNIDNCLNKVGSAAAAGCPDADGDGVPDVADKCPNLAGL 425 Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 D A G+ K L + + F +S + L Sbjct: 426 VDNAGCPEDYKDGVPLLKGFKSASGCAITKDELDILSYAAQSIEFHPGTSRIKAASNAQL 485 Query: 253 QKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG-VSEDRIS 310 QKI +V+ + ++IR + D N +L+ R+ + Y L+ + + R+ Sbjct: 486 QKICDVIKRCKDAKLTIRTYND----GPADAKNMKLATARSAAVYNFLLSKKCIDKSRL- 540 Query: 311 KISGFAHHRLKIA 323 G A A Sbjct: 541 AYEGAADEDPTNA 553 >gi|253572376|ref|ZP_04849779.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6] gi|251838151|gb|EES66239.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6] Length = 68 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 9/74 (12%) Query: 266 ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHH-RLKIAS 324 +S+ G+ D AR N +LS RA + + L G++ DRI ++ + + Sbjct: 1 MSVTGYAD--KGTGNARINSKLSEKRANNVVEALKAKGIAADRI-TVAYKGDTVQPY--N 55 Query: 325 DPMNSANRRIDILV 338 P R+ I + Sbjct: 56 TPEE---NRVSICI 66 >gi|88858356|ref|ZP_01132998.1| hypothetical protein PTD2_13239 [Pseudoalteromonas tunicata D2] gi|88819973|gb|EAR29786.1| hypothetical protein PTD2_13239 [Pseudoalteromonas tunicata D2] Length = 247 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 7/109 (6%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F SS L ++ VLA + + + ++G D + N LS R + Sbjct: 132 FRSGSSAIEAHFASQLDEVAAVLAQNPDLSLDLQGFADRR---GDEQANLILSKQRVTNV 188 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILVEDRQ 342 L+K GV+ R++ F A +RR+ + ++ Q Sbjct: 189 KAYLVKQGVNAVRLNT-DAFGEQHALAAQQDFEGDFFDRRVTLKAKNNQ 236 >gi|217077698|ref|YP_002335416.1| motility protein B [Thermosipho africanus TCF52B] gi|217037553|gb|ACJ76075.1| motility protein B [Thermosipho africanus TCF52B] Length = 288 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EV 265 +++ V E G LI+I D +F+ S+ E +L+K+G V+ T V Sbjct: 87 ISEEYKGKVTVEERDEGTLITISDLD---IFNPGSARLTAEAKKLLEKLGAVIIEHTTNV 143 Query: 266 ISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLM 300 + I G+ + P +I + NW LS RA S Sbjct: 144 LEIYGYANEIPVPENSIYQSNWHLSSARASSVVYFFT 180 Score = 39.2 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 45/132 (34%), Gaps = 1/132 (0%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS- 80 + P W Y D +T+L+ FF++++ +++ + + + Sbjct: 3 KKQECPKGAPLWMTTYGDMVTLLLTFFVLLFAMSSISPGKFQQVAVGLTSALNGNPPSVL 62 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 G Q P S + I + + + + ++ + +IF +++ + Sbjct: 63 TGGKSLQTEPLISQNPGVYQEILKISEEYKGKVTVEERDEGTLITISDLDIFNPGSARLT 122 Query: 141 EHCKNSLTRDSE 152 K L + Sbjct: 123 AEAKKLLEKLGA 134 >gi|317504762|ref|ZP_07962722.1| major outer membrane protein OmpA [Prevotella salivae DSM 15606] gi|315664144|gb|EFV03851.1| major outer membrane protein OmpA [Prevotella salivae DSM 15606] Length = 389 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 65/195 (33%), Gaps = 7/195 (3%) Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDS--EKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + N + + + NS +K L L + K P + K Sbjct: 180 EAGWNRMEDNFDGNEMAQLSNSHHGRGWEDKDNHLYAEIGLTFKLGKATWNKTPDVDAIK 239 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 L+ + L +++ +G + + + + + + F+ Sbjct: 240 ALSQSQIDALNSQLNDLNAE-NGKLRKELAEKPKTTVLTKSLK-EFVATPISVFFNIGKI 297 Query: 243 IPLP-ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + +V ++ + + + I + G+ D+S N RLS RA + + L+K Sbjct: 298 DVALLKDLVNVRALAKYAIENNSHILVTGYADSS--TGTPAINQRLSEQRANTIVEELVK 355 Query: 302 SGVSEDRISKISGFA 316 GV+ I +G Sbjct: 356 MGVNRSNIRTAAGGG 370 >gi|73746013|ref|YP_302605.1| outer membrane protein precursor [Sphingomonas sp. A1] gi|72534579|dbj|BAE19699.1| Upf30.5 [Sphingomonas sp. A1] Length = 155 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 13/108 (12%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRA 292 F SS+ P+ E+LA + +I + G T L+L RA Sbjct: 51 VSFPDSSTTFRPDAST-----AELLAEAKGAAIIYVSGRTSTLRPSAADE---ALALRRA 102 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 SA Q L+ GVS +I ++ + + N+R+DI V Sbjct: 103 LSARQYLIARGVSPLKIM-VNFASASDFVADNSTPEGRYQNQRVDIEV 149 >gi|237751947|ref|ZP_04582427.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229376514|gb|EEO26605.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 252 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 24/185 (12%), Positives = 52/185 (28%), Gaps = 24/185 (12%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 L + E ++ + + + TL + K + ++ + Sbjct: 37 QKQLALQNAELKELNRQMSDIAKTHEDLKITLHKDLLAEFSKNLESWNAEIDADNTVRFR 96 Query: 232 RNTPMFDKSSSIPLPETIVVLQKI---------GEVLAHSTEVISIRGHTDASP-----F 277 +FD +L E + E I I GHT Sbjct: 97 EPEILFDSGKKEVKTRFQEILDDFFPRYIKILTQEKYKNDIEEIRIEGHTSTEWQNAKTL 156 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSED------RISKISGFAHHRLKIASDPMNSAN 331 + N LS RA + + V + ++ + +G + + + + Sbjct: 157 ESRYLGNAELSQARALEVLKYCFSNPVIKADKQWLIKVLRANGLSFAKPL---ETAE-LS 212 Query: 332 RRIDI 336 RR++ Sbjct: 213 RRVEF 217 >gi|224418158|ref|ZP_03656164.1| hypothetical protein HcanM9_02663 [Helicobacter canadensis MIT 98-5491] gi|253827485|ref|ZP_04870370.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253510891|gb|EES89550.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 263 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 57/190 (30%), Gaps = 24/190 (12%) Query: 172 NYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQ 231 L + E + K+ + + + + L + K + ++ + Sbjct: 40 QKELALQNAELLALNKQMSDVAKTHQNLQTELYKDLVAEFSKDLGKWNAEIDEDNTVRFR 99 Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGE---------VLAHSTEVISIRGHTD-----ASPF 277 +FD+ +L E I I GHT A Sbjct: 100 EPDILFDQGEKEVKSRFKEILDDFFPRYIKILSRPQYKEDIEEIRIEGHTSKEWKNAKSL 159 Query: 278 RNIARDNWRLSLDRAYSAYQV-LMKSGVSEDR-----ISKISGFAHHRLKIASDPMNSAN 331 + N LS RA + +++ + + + +G + + +++ + Sbjct: 160 EDRYLGNAELSQARALEVLKYCFNNQQIAKQKEWLVSVLRANGLSFAKPLESAE----LS 215 Query: 332 RRIDILVEDR 341 RR++ V + Sbjct: 216 RRVEFKVLTK 225 >gi|320190585|gb|EFW65235.1| hypothetical protein ECoD_02000 [Escherichia coli O157:H7 str. EC1212] gi|326345387|gb|EGD69130.1| hypothetical protein ECF_01276 [Escherichia coli O157:H7 str. 1125] gi|326346758|gb|EGD70492.1| hypothetical protein ECoA_01138 [Escherichia coli O157:H7 str. 1044] Length = 206 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 47/176 (26%), Gaps = 21/176 (11%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + + L + + L A+ + + +L + P F Sbjct: 23 KEVAVAYENAQLQLYNALDIEFAKDLQDWDAEIDKQTLEVRFKSPDVLFGLGSTELKPKF 82 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRA 292 P + VL E + I GHT +N LS R Sbjct: 83 KLILDDFFPRYLKVLDNYQEHITEVR----IEGHTSTDWTGTTNPDIAYFNNMALSQGRT 138 Query: 293 YSAYQVLMK-SGVSEDRI-----SKISGFAHHRLKIA----SDPMNSANRRIDILV 338 + Q + ++ + G++ + DP S RR+ V Sbjct: 139 RAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAHPILDKTGKEDPNRS--RRVTFKV 192 >gi|156932816|ref|YP_001436732.1| hypothetical protein ESA_00612 [Cronobacter sakazakii ATCC BAA-894] gi|156531070|gb|ABU75896.1| hypothetical protein ESA_00612 [Cronobacter sakazakii ATCC BAA-894] Length = 246 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 IKK+ + W I YAD MT +M FLV+ + + + + + Sbjct: 8 IKKRRGDEAEK---PFW-ISYADLMTAMMVLFLVVMVASLSSVTQRIQKAEQ 55 >gi|150021176|ref|YP_001306530.1| flagellar motor protein-like protein [Thermosipho melanesiensis BI429] gi|149793697|gb|ABR31145.1| Flagellar motor protein-like protein [Thermosipho melanesiensis BI429] Length = 288 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 6/97 (6%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EV 265 +++ V + G LI+I D +F+ S+ E +L+K+G V+ T V Sbjct: 87 ISEEYKGKVTVQEKDEGTLITISDLD---IFEPGSARLTAEAKRLLEKLGTVIIEHTTNV 143 Query: 266 ISIRGHTDASPF--RNIARDNWRLSLDRAYSAYQVLM 300 + I G + P +I NW LS RA S Sbjct: 144 LEIYGFANEIPLPESSIYFSNWHLSSARAASVVLFFT 180 Score = 40.3 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 17/131 (12%), Positives = 45/131 (34%), Gaps = 1/131 (0%) Query: 22 AIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTAS- 80 + P W Y D +T+L+ FF++++ +++ + + + Sbjct: 3 KKQECPKGAPLWMTTYGDMVTLLLTFFVLLFAMSSISPGKFQQVAVGLTSALNGNPPSVL 62 Query: 81 KGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQS 140 G Q P S + I + + + + ++ + +IF +++ + Sbjct: 63 TGGKSLQTEPLISQNPGVYQEILKISEEYKGKVTVQEKDEGTLITISDLDIFEPGSARLT 122 Query: 141 EHCKNSLTRDS 151 K L + Sbjct: 123 AEAKRLLEKLG 133 >gi|172061805|ref|YP_001809457.1| cytochrome c oxidase subunit II [Burkholderia ambifaria MC40-6] gi|171994322|gb|ACB65241.1| cytochrome c oxidase, subunit II [Burkholderia ambifaria MC40-6] Length = 535 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 19/165 (11%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 L +++ + K +D A + + G ++ +T F Sbjct: 380 LQPKQVADARNGKMPEDAAGAAAPAEAASAPAQAASGAAEQSAAASAAAPASTALSTVYF 439 Query: 238 DKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 + S +P + AH +++ G TD + A N L+ RA Sbjct: 440 ETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQVVR 496 Query: 297 QVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+ED I I+G A + + RR++I Sbjct: 497 DALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 531 >gi|307728349|ref|YP_003905573.1| cytochrome c oxidase subunit II [Burkholderia sp. CCGE1003] gi|307582884|gb|ADN56282.1| cytochrome c oxidase, subunit II [Burkholderia sp. CCGE1003] Length = 552 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 19/111 (17%) Query: 232 RNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 + FD S++P V AH ++ G TDA+ A N +L+ Sbjct: 447 PASVYFDTGKSTLPADAKAAVEAAAAYAKAHPDAKFTLSGFTDAT---GSADTNAKLAKS 503 Query: 291 RAYSAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 RA + L +G++ED I I+G SD + RR+ I Sbjct: 504 RAEAVRDALKAAGIAEDHIILKKPETITG--------GSDAKEA--RRVQI 544 >gi|115352953|ref|YP_774792.1| cytochrome c oxidase subunit II [Burkholderia ambifaria AMMD] gi|115282941|gb|ABI88458.1| cytochrome c oxidase, subunit II [Burkholderia ambifaria AMMD] Length = 535 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 19/165 (11%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 L +++ + K +D A + + G ++ +T F Sbjct: 380 LQPKQVADARNGKMPEDTAGAAAPAEAASAPAQAASGAAEQSAAASAAAPASTALSTVYF 439 Query: 238 DKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 + S +P + AH +++ G TD + A N L+ RA Sbjct: 440 ETGKSVLPADAKAAIAAAADYAKAHPDAKLALSGFTDKT---GSADANAELAKHRAQVVR 496 Query: 297 QVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+ED I I+G A + + RR++I Sbjct: 497 DALKAAGVAEDHIILKKPETITGGADAK--------EA--RRVEI 531 >gi|323524639|ref|YP_004226792.1| cytochrome c oxidase subunit II [Burkholderia sp. CCGE1001] gi|323381641|gb|ADX53732.1| cytochrome c oxidase, subunit II [Burkholderia sp. CCGE1001] Length = 547 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 77/286 (26%), Gaps = 26/286 (9%) Query: 57 TDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIG 116 D KK +P M + + ++ Sbjct: 274 VDAQKKKMAAGQDDPNKTYTMAELMERGGKVYAANCAVCHQPTGKGAGAFPALDGSKIAN 333 Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLP 176 + L+ S + + + E+ + D+ + + Sbjct: 334 GPIAEHVSLVLKGKNAMPSWAPTLNDVEIASVVTFERNSWGNHTGDILQPKQVADARNGK 393 Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 LA + +S + A + + SI Sbjct: 394 LPEGGNHLADAGAAVSDASGAQAASGGAASEASSAQAAAAGSEGAAALPASIY------- 446 Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S++P V AH ++ G TDA+ A N +L+ RA + Sbjct: 447 FETGKSTLPADAKAAVEAAAAYAKAHPDAKFALSGFTDAT---GSADTNAKLAKSRAEAV 503 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +G++ED I I+G SD + RR+ I Sbjct: 504 RDALKAAGIAEDHIILKKPETITG--------GSDAKEA--RRVQI 539 >gi|294782117|ref|ZP_06747443.1| hypothetical protein HMPREF0400_00084 [Fusobacterium sp. 1_1_41FAA] gi|294480758|gb|EFG28533.1| hypothetical protein HMPREF0400_00084 [Fusobacterium sp. 1_1_41FAA] Length = 232 Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 37/190 (19%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 ++K+K K ++ + I L+ +++ + +SI + Sbjct: 35 QVNKQKEHIEVIAKDFRNTKQSIYKDLNKEFEEDLKRW---NAYIDKDTLSITFKEPDVF 91 Query: 237 FDKSSSIP--------LPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-----ARD 283 FD SS ++ + + E I I GHT + ++ Sbjct: 92 FDVGSSEINSNFKLILKDFFPRYIEMLYKNYRDEIEEIRIEGHTSSEWNKDDDDLQAYFK 151 Query: 284 NWRLSLDRAYSA-------------YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN-S 329 N LS R+ S L++ + +G ++ I + N + Sbjct: 152 NMSLSQARSKSVLEYCMLLDSMEEYRDFLIEK-------ATANGLSYSHRIIENGKENYN 204 Query: 330 ANRRIDILVE 339 +RR++ ++ Sbjct: 205 KSRRVEFKIK 214 >gi|302383729|ref|YP_003819552.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] gi|302194357|gb|ADL01929.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 242 Score = 50.3 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 23/210 (10%), Positives = 60/210 (28%), Gaps = 13/210 (6%) Query: 131 IFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKK 190 + ++ + ++ + + ++ + + S + ++ Sbjct: 21 WPAAAQTRSVCFEPGTAQLTADAYAAVREVGLEMQTGPGRWPHAVLGGSVADDGSALDRE 80 Query: 191 RLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM-------FDKSSSI 243 R+ + ++ G+ I + + D + F + + Sbjct: 81 RVDQVLLELVRVGVGVGRVKIEPIPSPSAHCVPLDVGQDDPPYYALWHFWPLFFPEGGTE 140 Query: 244 PLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSG 303 + ++ I V ++G+ D A + +S RA + L++ G Sbjct: 141 VASDGARRMRFIVADYQPGQTVYRVQGYADT---AGSAAASMAVSRRRADNVASELIRQG 197 Query: 304 VSEDRISKISGFAHHRLK--IASDPMNSAN 331 V D I + F RL N Sbjct: 198 VRWDDIV-VEAFGETRLARPTPDGTGEPLN 226 >gi|167835314|ref|ZP_02462197.1| cytochrome c oxidase, subunit II [Burkholderia thailandensis MSMB43] Length = 117 Score = 50.3 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 19/106 (17%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F+ S + + E + + +++ G TD + A N L+ RA + Sbjct: 21 FETGKSELPADAKDAIAAAAEYVKAHPDAKLALSGFTDKT---GSADANAELARRRAQAV 77 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +GV+++RI I+G A + + RR++I Sbjct: 78 RDALKTAGVAQERIILKKPETITGGADAK--------EA--RRVEI 113 >gi|60683246|ref|YP_213390.1| hypothetical protein BF3801 [Bacteroides fragilis NCTC 9343] gi|60494680|emb|CAH09481.1| putative exported protein [Bacteroides fragilis NCTC 9343] Length = 616 Score = 50.3 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 4/70 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E++ L++ + + G D N+ LS RA S Sbjct: 500 FDFDSDELTDESVRRLEQFINEMGTYQFSELRFDGFADEI---GSDSYNYSLSERRAESV 556 Query: 296 YQVLMKSGVS 305 + L G++ Sbjct: 557 AEFLRNHGLN 566 >gi|325068013|ref|ZP_08126686.1| OmpA/MotB domain protein [Actinomyces oris K20] Length = 336 Score = 50.3 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 65/245 (26%), Gaps = 13/245 (5%) Query: 58 DDDTKKAIEQYFNPFGKNLMTASKGIFDEQNP----PERSSQNKIDLSIDEHITKNSVDL 113 DD K + N G N+ A + + + P +DL + + Sbjct: 99 DDAAVKEVSDSLNDHGSNVFEADRPLTRQGGNRTYRPAAGGVRLLDLPTNRVWLATTGVE 158 Query: 114 KIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENY 173 + N + K + G D + ++ Sbjct: 159 QTSKDNYANTIALKPGETTTCFVLFGAVDTKQVTVFVPQAGFVTVNVLDSSAAAASGIDF 218 Query: 174 FLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRN 233 + + +++ R + + + + + + +++ Sbjct: 219 KAVDKAFDDVISYSRDES-KPIQALAAPAPIERYTQALDDSTSTLADNQKVTVTLASDVT 277 Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDR 291 F S+ P L+ + LA +SI GHTD N LS R Sbjct: 278 ---FASDSADLAPAADAQLKTVAGQLAQYPDGGTLSIVGHTDDVQ---DDAYNQTLSEKR 331 Query: 292 AYSAY 296 A + Sbjct: 332 ANAVK 336 >gi|261417369|ref|YP_003251052.1| Thrombospondin type 3 repeat protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373825|gb|ACX76570.1| Thrombospondin type 3 repeat protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327349|gb|ADL26550.1| thrombospondin type 3 repeat protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 708 Score = 50.3 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 30/229 (13%), Positives = 60/229 (26%), Gaps = 4/229 (1%) Query: 88 NPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSL 147 N P + NK +D + + + + + Sbjct: 457 NTPAGLTVNKYGCFLDRDRDGVPDEWDKCPDSAPNEIVNMYGCPIDSDEDGIPDFMDKCT 516 Query: 148 TRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLV 207 + D + P + E K+ L + L Sbjct: 517 NTPAGVKVDSIGCRLDFDGDGVFDEEDKCPDTPENAPVDKQGCPLDSDKDGVFDYLDNCP 576 Query: 208 ADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVIS 267 V +++ F K + PL + L + V+ Sbjct: 577 NTLERTEVDVNGCPIREKLNLDKIARRIQFHKGTDKPLNSSYTALSDVVSVMR---HNKQ 633 Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 I S ++D LS RA Y+ ++ G+ E+++ + +GF Sbjct: 634 IAIEIQCSVKPGESKDPQALSDARATMVYEFIVNKGIKEEKL-RANGFG 681 >gi|183221921|ref|YP_001839917.1| hypothetical protein LEPBI_I2560 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167780343|gb|ABZ98641.1| Hypothetical protein LEPBI_I2560 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 125 Score = 50.3 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 43/105 (40%), Gaps = 9/105 (8%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-IARDNWRLSLDRAYSA 295 F K S++ +V LQ + + L + H DA +N +S R+ Sbjct: 23 FAKKSNLIPKPDLVRLQTVADFLNRNRNY---EIHIDAHAVEGKNNEENIMISEKRSLEV 79 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILV 338 + L+ V ++I ++ + + + + + NRR++I + Sbjct: 80 ERFLLIHFVEPNQIRRLF-YGNTK--SPNQTKEHEALNRRVEIQL 121 >gi|53715312|ref|YP_101304.1| hypothetical protein BF4028 [Bacteroides fragilis YCH46] gi|253567202|ref|ZP_04844652.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265767798|ref|ZP_06095330.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|52218177|dbj|BAD50770.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|251944033|gb|EES84552.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263252470|gb|EEZ23998.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|301164765|emb|CBW24324.1| putative exported protein [Bacteroides fragilis 638R] Length = 616 Score = 50.3 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 4/70 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E++ L++ + + G D N+ LS RA S Sbjct: 500 FDFDSDELTDESVRRLEQFINEMGTYQFSELRFDGFADEI---GSDSYNYSLSERRAESV 556 Query: 296 YQVLMKSGVS 305 + L G++ Sbjct: 557 AEFLRNHGLN 566 >gi|332883495|gb|EGK03778.1| hypothetical protein HMPREF9456_01845 [Dysgonomonas mossii DSM 22836] Length = 235 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 7/102 (6%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIR-GHTDASPFRNIARDNWRLSLD 290 N F + + ++ L + G+ D A+ N +LS Sbjct: 130 PNPVFFRINKYVIDASEWSKIELAVNYLNEHPGSTVVVTGYADKK--TGTAKINMKLSEQ 187 Query: 291 RAYSAYQVL-MKSGVSEDRISKISGFAHH-RLK-IASDPMNS 329 R+ + L K G++++RI ++ + + +D + Sbjct: 188 RSNEVAKALETKYGIAKNRI-SVNWKGDGLQPFQLENDKNRA 228 >gi|167722111|ref|ZP_02405347.1| hypothetical protein BpseD_24069 [Burkholderia pseudomallei DM98] Length = 351 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI-ARDNWRLSLD 290 R MF ++ P +++KI +A +++RG+TD P ++ N LS + Sbjct: 285 RGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTDNQPIKSRQFASNEALSEE 344 Query: 291 RAYSAYQ 297 RA Q Sbjct: 345 RATQVMQ 351 >gi|327399255|ref|YP_004340124.1| PA14 domain-containing protein [Hippea maritima DSM 10411] gi|327181884|gb|AEA34065.1| PA14 domain protein [Hippea maritima DSM 10411] Length = 554 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 12/87 (13%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDR 291 R +F++ S PE I VL KI +++ + I+I G D LS DR Sbjct: 471 RRGVLFEEYSDRLKPEGIKVLMKIKKLIGEKYKSINIYGRDD------------ELSKDR 518 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHH 318 S +L+ G+ RI K G Sbjct: 519 IKSIVNMLVGFGIDPSRIRKYYGLGDS 545 >gi|294789473|ref|ZP_06754709.1| cytochrome c oxidase, subunit II [Simonsiella muelleri ATCC 29453] gi|294482553|gb|EFG30244.1| cytochrome c oxidase, subunit II [Simonsiella muelleri ATCC 29453] Length = 179 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 18/114 (15%) Query: 228 IIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRL 287 D F SS + I + S + + I G+TD + A N +L Sbjct: 76 YEDGIVKIYFAVGSSKI-AKNIQTVSNQIIDAGKSGKKLIISGYTDGT---GSATTNAKL 131 Query: 288 SLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDP-MNSAN----RRIDI 336 + RA + L+K VS I L+ ++ + N RR+DI Sbjct: 132 AKQRAEAVKAFLVKQNVSAANI---------ELRKPNNTIGAAGNHVEGRRVDI 176 >gi|255011757|ref|ZP_05283883.1| hypothetical protein Bfra3_21635 [Bacteroides fragilis 3_1_12] gi|313149595|ref|ZP_07811788.1| OmpA family protein [Bacteroides fragilis 3_1_12] gi|313138362|gb|EFR55722.1| OmpA family protein [Bacteroides fragilis 3_1_12] Length = 616 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 4/70 (5%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S E++ L++ + + G D N+ LS RA S Sbjct: 500 FDFDSDELTDESVRRLEQFINEMGTYQFSELRFDGFADEI---GSDSYNYSLSERRAESV 556 Query: 296 YQVLMKSGVS 305 + L G++ Sbjct: 557 AEFLRNHGLN 566 >gi|251733485|emb|CAR82492.1| pal [Sinorhizobium kostiense] gi|251733487|emb|CAR82493.1| pal [Sinorhizobium kostiense] gi|251733489|emb|CAR82494.1| pal [Sinorhizobium kostiense] Length = 87 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 SS + L + + LA I++ GH D N L RA + Sbjct: 1 TDSSSIRADAQATLDRQAQWLAKYPNYAITVEGHADER---GTREYNLALGARRAAATRD 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322 L+ GV +R+ IS + + Sbjct: 58 YLISRGVPANRMRTIS-YGKEKPVA 81 >gi|294787779|ref|ZP_06753023.1| putative OmpA family protein [Simonsiella muelleri ATCC 29453] gi|294484072|gb|EFG31755.1| putative OmpA family protein [Simonsiella muelleri ATCC 29453] Length = 214 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 28/118 (23%) Query: 237 FDKSSSIPLPETIVVLQKIGEVL------------AHSTEVISIRGHTDASPFRNIARDN 284 F+ ++ PE +L ++ V + + GHTD+ N Sbjct: 85 FESGKAVLKPEGKAILDQLMPVFAKAVFDELSGEQQEEITRLIVEGHTDSV---GSYASN 141 Query: 285 WRLSLDRAYSAYQVLMKSGVSE--------DRISKISGFAHHRLKIASDPMNSANRRI 334 +LS +RA + + + + + +++ + G + AS N A+RR+ Sbjct: 142 MQLSTERANAVLSY-IDTQMPDFPHKAELLAKMTAV-GRGEN---DASPTENPADRRV 194 >gi|221067138|ref|ZP_03543243.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1] gi|220712161|gb|EED67529.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1] Length = 174 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 9/135 (6%) Query: 204 SGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST 263 V+ V + + + F + L + + +A Sbjct: 47 EAAVSAPSATNVPVVVIEETARVIVENGVVKFYFVSGKAEVAAGANEALSDVVKGVAE-G 105 Query: 264 EVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIA 323 + I G DA+ A N L+ RA + LM GV+ED++ + + Sbjct: 106 KRALISGFHDAT---GSAEINAELAKQRAQAVQAALMALGVAEDKVELKK---PEQTQAD 159 Query: 324 SDPMNSANRRIDILV 338 + RR+++++ Sbjct: 160 GSNAEA--RRVEVIL 172 >gi|154250209|ref|YP_001411034.1| motility protein B [Fervidobacterium nodosum Rt17-B1] gi|154154145|gb|ABS61377.1| motility protein B [Fervidobacterium nodosum Rt17-B1] Length = 290 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 6/96 (6%) Query: 207 VADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EV 265 +++ + E G LI++ N +F+ +S+ E +++K+G V+ T + Sbjct: 88 ISEEYKGKITIEDKDEGTLITLT---NFKIFEPASARLTAEAKEIIEKLGAVIIEHTSNI 144 Query: 266 ISIRGHTDASPFR--NIARDNWRLSLDRAYSAYQVL 299 I +RG+ D P +I NW LS RA + + Sbjct: 145 IEVRGYADDRPLTPDSIYPSNWHLSSARASTVVNFM 180 >gi|332520733|ref|ZP_08397195.1| hypothetical protein LacalDRAFT_1808 [Lacinutrix algicola 5H-3-7-4] gi|332044086|gb|EGI80281.1| hypothetical protein LacalDRAFT_1808 [Lacinutrix algicola 5H-3-7-4] Length = 234 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 53/189 (28%), Gaps = 43/189 (22%) Query: 188 RKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPE 247 + L + + V + G + +T ++ +F E Sbjct: 43 EQDIYNSLELNLKQEIENEVIELSPDGTVKFNLQT---------KDKELFPSDRYTMTYE 93 Query: 248 TIVVLQ-KIGEVLA--------HSTEVISIRGHTDASPFR-----NIARDNWRLSLDRAY 293 L + L ++ + I GHTD P R + N LS +RA Sbjct: 94 FEKTLNEFTPKYLKIITASNYLNNISEVRIEGHTDTIPPRRSRNRDSYDYNLELSSNRAR 153 Query: 294 SAYQVLMKS----GVSED---R---ISKISGFAHHRLKIASDP----------MNSANRR 333 S + + R + +G ++ R + N +RR Sbjct: 154 SVLNYIRNHESYLNYPDSIKTRLDFLFTANGLSYSRALNSGKEVSYLSSDKSVDNDLSRR 213 Query: 334 IDILVEDRQ 342 ++ + Sbjct: 214 VEFKIVTSN 222 >gi|298369577|ref|ZP_06980894.1| cytochrome c oxidase, subunit II [Neisseria sp. oral taxon 014 str. F0314] gi|298282134|gb|EFI23622.1| cytochrome c oxidase, subunit II [Neisseria sp. oral taxon 014 str. F0314] Length = 159 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 51/152 (33%), Gaps = 11/152 (7%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + + +A+ +S + + + + + F S Sbjct: 18 QAVVNGMAENSASETVAPADVAPAEASASMPSENEAAVVVENGIVKFYFASGKSDLAAGA 77 Query: 249 IVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDR 308 L+ + + + + G D + N LS RA++ LM GV+E++ Sbjct: 78 EDALKDVLAGVKA-GKKAVVSGFHDKT---GNQALNEELSKQRAFAVKNALMGLGVAENQ 133 Query: 309 ISKISGFAHHRLKIASDPMN-SANRRIDILVE 339 I + + + + RR+++++E Sbjct: 134 IEL------RKPSDSEGSGSKAEARRVEVVLE 159 >gi|170021864|ref|YP_001726818.1| hypothetical protein EcolC_3889 [Escherichia coli ATCC 8739] gi|169756792|gb|ACA79491.1| conserved hypothetical protein [Escherichia coli ATCC 8739] Length = 235 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 53/180 (29%), Gaps = 27/180 (15%) Query: 181 EKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKS 240 EK + ++ +I + L A ++ E + + + +F Sbjct: 47 EKEKIKEVAVAYENAQLQIYNALDIEFAKDLQDW-DAEIDKQTLEVRFKSPD--VLFGLG 103 Query: 241 SSIPLPETIVVLQKIG-------EVLAHSTEVISIRGHTDASPFRN-----IARDNWRLS 288 S+ P+ ++L + + I GHT +N LS Sbjct: 104 STELKPKFKLILDDFFPRYLKVLDNYQEHITEVRIEGHTSTDWTGTTNPDIAYFNNMALS 163 Query: 289 LDRAYSAYQVLMK-SGVSEDRI-----SKISGFAHHRLKIA----SDPMNSANRRIDILV 338 R + Q + ++ + G++ + DP S RR+ V Sbjct: 164 QGRTRAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAHPILDKTGKEDPNRS--RRVTFKV 221 >gi|253569364|ref|ZP_04846774.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251841383|gb|EES69464.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 381 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 4/123 (3%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + L+ + +++ + + T + +I+ F S E Sbjct: 234 DEELRLMREQLKAMNDENNRLKDELATSNKVTERVVETNILSAPYLVTFQISRYALSNEA 293 Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSE 306 V + +++ + V +I G+ D N LS RA + Y L+ GV Sbjct: 294 RVNIGFQAKIMKENKNAVYTIIGYAD--KGTGTKEFNQFLSKARAEAVYNCLVNEFGVPA 351 Query: 307 DRI 309 ++ Sbjct: 352 SQL 354 >gi|29348270|ref|NP_811773.1| putative outer membrane protein [Bacteroides thetaiotaomicron VPI-5482] gi|29340173|gb|AAO77967.1| putative outer membrane protein [Bacteroides thetaiotaomicron VPI-5482] Length = 396 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 4/123 (3%) Query: 189 KKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPET 248 + L+ + +++ + + T + +I+ F S E Sbjct: 249 DEELRLMREQLKAMNDENNRLKDELATSNKVTERVVETNILSAPYLVTFQISRYALSNEA 308 Query: 249 IVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS-GVSE 306 V + +++ + V +I G+ D N LS RA + Y L+ GV Sbjct: 309 RVNIGFQAKIMKENKNAVYTIIGYAD--KGTGTKEFNQFLSKARAEAVYNCLVNEFGVPA 366 Query: 307 DRI 309 ++ Sbjct: 367 SQL 369 >gi|331665946|ref|ZP_08366840.1| hypothetical protein ECMG_03823 [Escherichia coli TA143] gi|331056997|gb|EGI28991.1| hypothetical protein ECMG_03823 [Escherichia coli TA143] Length = 159 Score = 50.0 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 40/135 (29%), Gaps = 24/135 (17%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIG-------EVLAHSTEVISIRGHTDASPFR 278 + + + +F S+ P+ ++L + + I GHT Sbjct: 13 LEVRFKSPDVLFGLGSTELKPKFKLILDDFFPRYLKVLDNYQEHITEVRIEGHTSTDWTG 72 Query: 279 N-----IARDNWRLSLDRAYSAYQVLMK-SGVSEDRI-----SKISGFAHHRLKIA---- 323 +N LS R + Q + ++ + G++ + Sbjct: 73 TTNPDIAYFNNMALSQGRTRAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAHPILDKTGK 132 Query: 324 SDPMNSANRRIDILV 338 DP S RR+ V Sbjct: 133 EDPNRS--RRVTFKV 145 >gi|327403395|ref|YP_004344233.1| hypothetical protein Fluta_1401 [Fluviicola taffensis DSM 16823] gi|327318903|gb|AEA43395.1| hypothetical protein Fluta_1401 [Fluviicola taffensis DSM 16823] Length = 547 Score = 50.0 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 16/115 (13%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 + L + + K + + + G D++ R N+RLS R+ Sbjct: 48 VYYPSGDYKLLDDNKQEIDKYIFSHNLRKIDSLHVIGFADST---GKKRLNFRLSRKRSE 104 Query: 294 SAYQVLMKSGV-SEDRISKISGFAHHR-LKIASDPMNSAN-RRIDILV--EDRQG 343 + L+ G+ + + L+ ++ N RR++I + E ++G Sbjct: 105 KVKEYLV--GILPPKTLVRSLAKGEENALRNPNE-----NHRRVEIHLFYEGKRG 152 >gi|206603228|gb|EDZ39708.1| Probable OmpA family protein [Leptospirillum sp. Group II '5-way CG'] Length = 232 Score = 50.0 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 4/80 (5%) Query: 232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 + F +S + VL +L + + + GHTD ++ N +L L+ Sbjct: 104 QKDIYFSFNSKKISYANLSVLHAYSRLLRKNPRLALRLYGHTDPV---GGSKFNHKLGLE 160 Query: 291 RAYSAYQVLMKSGVSEDRIS 310 RA +A +VL+ +GV RI Sbjct: 161 RALAARRVLLATGVPAKRIF 180 >gi|146342455|ref|YP_001207503.1| hypothetical protein BRADO5614 [Bradyrhizobium sp. ORS278] gi|146195261|emb|CAL79286.1| hypothetical protein BRADO5614 [Bradyrhizobium sp. ORS278] Length = 247 Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 10/100 (10%) Query: 237 FDKSSSIPLP-ETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYS 294 F++ S+ P P + L + + L+ + + + GH DA N LS RA + Sbjct: 134 FERGSTRPNPADMKRALSILPKALSRHADATLLVEGHADA---NGSEDLNVLLSFSRAKA 190 Query: 295 AYQVLMKSGVSEDRI-SKISGFAHHRLKIASDPMNSANRR 333 ++L K G+ ++ + +G D +A+ R Sbjct: 191 VAELLKKDGIPAQQLAVRAAGAG----TARGDTEAAADDR 226 >gi|300928437|ref|ZP_07143969.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|300463554|gb|EFK27047.1| conserved hypothetical protein [Escherichia coli MS 187-1] Length = 235 Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 47/176 (26%), Gaps = 21/176 (11%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + + L + + L A+ + + +L + P F Sbjct: 52 KEVAVAYENAQLQLYNALDIEFAKDLKDWDAEIDKQTLEVRFKSPDVLFGLGSTELKPKF 111 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRA 292 P + VL E + I GHT +N LS R Sbjct: 112 KLILDDFFPRYLKVLDNYQEHITEVR----IEGHTSTDWTGTTNPDIAYFNNMALSQGRT 167 Query: 293 YSAYQVLMK-SGVSEDRI-----SKISGFAHHRLKIA----SDPMNSANRRIDILV 338 + Q + ++ + G++ + DP S RR+ V Sbjct: 168 RAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAHPILDKTGKEDPNRS--RRVTFKV 221 >gi|15804874|ref|NP_290915.1| hypothetical protein Z5895 [Escherichia coli O157:H7 EDL933] gi|15834511|ref|NP_313284.1| hypothetical protein ECs5257 [Escherichia coli O157:H7 str. Sakai] gi|168749548|ref|ZP_02774570.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4113] gi|168754862|ref|ZP_02779869.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4401] gi|168760537|ref|ZP_02785544.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4501] gi|168766571|ref|ZP_02791578.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4486] gi|168773999|ref|ZP_02799006.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4196] gi|168782807|ref|ZP_02807814.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4076] gi|168784934|ref|ZP_02809941.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC869] gi|168797862|ref|ZP_02822869.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC508] gi|170680753|ref|YP_001746734.1| hypothetical protein EcSMS35_4823 [Escherichia coli SMS-3-5] gi|195937305|ref|ZP_03082687.1| hypothetical protein EscherichcoliO157_12775 [Escherichia coli O157:H7 str. EC4024] gi|208805799|ref|ZP_03248136.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4206] gi|208812352|ref|ZP_03253681.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4045] gi|208821526|ref|ZP_03261846.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4042] gi|209396899|ref|YP_002273822.1| hypothetical protein ECH74115_5802 [Escherichia coli O157:H7 str. EC4115] gi|217325545|ref|ZP_03441629.1| conserved hypothetical protein [Escherichia coli O157:H7 str. TW14588] gi|254796300|ref|YP_003081137.1| hypothetical protein ECSP_5382 [Escherichia coli O157:H7 str. TW14359] gi|261226603|ref|ZP_05940884.1| hypothetical protein EscherichiacoliO157_18722 [Escherichia coli O157:H7 str. FRIK2000] gi|261256954|ref|ZP_05949487.1| hypothetical protein EscherichiacoliO157EcO_14173 [Escherichia coli O157:H7 str. FRIK966] gi|291285682|ref|YP_003502500.1| hypothetical protein G2583_5101 [Escherichia coli O55:H7 str. CB9615] gi|12519300|gb|AAG59481.1|AE005660_2 hypothetical protein Z5895 [Escherichia coli O157:H7 str. EDL933] gi|13364735|dbj|BAB38680.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|170518471|gb|ACB16649.1| conserved hypothetical protein [Escherichia coli SMS-3-5] gi|187770296|gb|EDU34140.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4196] gi|188016168|gb|EDU54290.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4113] gi|188999800|gb|EDU68786.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4076] gi|189357848|gb|EDU76267.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4401] gi|189364307|gb|EDU82726.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4486] gi|189368928|gb|EDU87344.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4501] gi|189374962|gb|EDU93378.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC869] gi|189379550|gb|EDU97966.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC508] gi|208725600|gb|EDZ75201.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4206] gi|208733629|gb|EDZ82316.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4045] gi|208741649|gb|EDZ89331.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4042] gi|209158299|gb|ACI35732.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4115] gi|217321766|gb|EEC30190.1| conserved hypothetical protein [Escherichia coli O157:H7 str. TW14588] gi|254595700|gb|ACT75061.1| predicted protein [Escherichia coli O157:H7 str. TW14359] gi|290765555|gb|ADD59516.1| hypothetical protein G2583_5101 [Escherichia coli O55:H7 str. CB9615] gi|320639026|gb|EFX08672.1| hypothetical protein ECO5101_17161 [Escherichia coli O157:H7 str. G5101] gi|320644396|gb|EFX13461.1| hypothetical protein ECO9389_14588 [Escherichia coli O157:H- str. 493-89] gi|320649714|gb|EFX18238.1| hypothetical protein ECO2687_22184 [Escherichia coli O157:H- str. H 2687] gi|320660616|gb|EFX28077.1| hypothetical protein ECO5905_14943 [Escherichia coli O55:H7 str. USDA 5905] gi|320665544|gb|EFX32590.1| hypothetical protein ECOSU61_14616 [Escherichia coli O157:H7 str. LSU-61] Length = 235 Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 47/176 (26%), Gaps = 21/176 (11%) Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMF 237 + + L + + L A+ + + +L + P F Sbjct: 52 KEVAVAYENAQLQLYNALDIEFAKDLQDWDAEIDKQTLEVRFKSPDVLFGLGSTELKPKF 111 Query: 238 DKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRA 292 P + VL E + I GHT +N LS R Sbjct: 112 KLILDDFFPRYLKVLDNYQEHITEVR----IEGHTSTDWTGTTNPDIAYFNNMALSQGRT 167 Query: 293 YSAYQVLMK-SGVSEDRI-----SKISGFAHHRLKIA----SDPMNSANRRIDILV 338 + Q + ++ + G++ + DP S RR+ V Sbjct: 168 RAVLQYVYDIKNIATHQQWVKSKFAAVGYSSAHPILDKTGKEDPNRS--RRVTFKV 221 >gi|311695658|gb|ADP98531.1| OmpA family protein-like protein [marine bacterium HP15] Length = 202 Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 20/185 (10%) Query: 161 TDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETT 220 ++ + + + + P + + + I S L + Sbjct: 29 SESDSADMIDRSVQGPDMGALNARLANLEALQKQNVDAIKSLSERLDRFEAAICRGDDCG 88 Query: 221 RTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNI 280 R ++ R T +F + S + + ++ E + +IS+RG DA Sbjct: 89 RRMLI------RETVLFALNDSTLSEQAKDRINRLMEGVKE-GALISLRGQADAL---GD 138 Query: 281 ARDNWRLSLDRAYSAYQV----LMKSGVSEDRISKISGFAHHRLKIASDPMNSAN--RR- 333 N+ LSL RA + Q L +SG + D + I G ++ S N RR Sbjct: 139 EIYNYLLSLRRAAAVKQYLDTLLAESGQTGDLLITIDGTGEA---LSGGSDESENPARRM 195 Query: 334 IDILV 338 ++IL+ Sbjct: 196 VEILI 200 >gi|262377779|ref|ZP_06070996.1| small protein A [Acinetobacter lwoffii SH145] gi|262307288|gb|EEY88434.1| small protein A [Acinetobacter lwoffii SH145] Length = 262 Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 15/109 (13%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHST--EVISIRGHTDASPFRNIARDNWRLSLDRAYS 294 FD+S++ + + + I E + S I++ G D N +LS RA + Sbjct: 154 FDRSNANAIEQGSSSVAAIAERIKQSNSTGPITVAGFADPL---GKFSYNHQLSAQRANT 210 Query: 295 AYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMN------SANRRI 334 ++L+ G+ +RI +I + L + N + NRR+ Sbjct: 211 VAKLLVNEGIDVNRI-QIQANSQTDLYQQCAGNKANNRLVGCLAPNRRV 258 >gi|83746859|ref|ZP_00943906.1| Cytochrome c oxidase polypeptide II [Ralstonia solanacearum UW551] gi|207742207|ref|YP_002258599.1| cytochrome c oxidase polypeptide II cytochrome aa3 subunit 2 oxidoreductase protein [Ralstonia solanacearum IPO1609] gi|83726444|gb|EAP73575.1| Cytochrome c oxidase polypeptide II [Ralstonia solanacearum UW551] gi|206593595|emb|CAQ60522.1| cytochrome c oxidase polypeptide II cytochrome aa3 subunit 2 oxidoreductase protein [Ralstonia solanacearum IPO1609] Length = 525 Score = 49.6 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 67/228 (29%), Gaps = 21/228 (9%) Query: 117 STNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKS--INKEENYF 174 N K + ++N ++H L D+E + I E N + Sbjct: 307 QPNGKGGGPFPALDGSKIANGPLADHVGIVLHGKGAMPPWASALNDVEIASVITYERNNW 366 Query: 175 LPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNT 234 + ++ R + + A + Sbjct: 367 GNHTNDVLQPTQVKEARGGKMPEGGGHLAGAGAAAPAPEAASASAASGNAAAGAATLPAN 426 Query: 235 PMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD S++P V AH ++ G TD + A N +L+ RA Sbjct: 427 VYFDTGKSTLPADAKAAVDAAAAYAKAHPDAKFTVSGFTDTT---GSADLNAKLAKSRAQ 483 Query: 294 SAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 + L +G++ED I I+G A + + RR+ I Sbjct: 484 AVRDALKAAGIAEDHIVLKKPETITGGA--------NAKEA--RRVQI 521 >gi|207727804|ref|YP_002256198.1| cytochrome c oxidase polypeptide II cytochrome aa3 subunit 2 protein [Ralstonia solanacearum MolK2] gi|206591045|emb|CAQ56657.1| cytochrome c oxidase polypeptide II cytochrome aa3 subunit 2 protein [Ralstonia solanacearum MolK2] Length = 527 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 19/111 (17%) Query: 232 RNTPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLD 290 FD S++P AH ++ G TD + A N +L+ Sbjct: 426 PANVYFDTGKSTLPADAKAAGDAAAAYAKAHPDAKFTVSGFTDTT---GSADLNAKLAKS 482 Query: 291 RAYSAYQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 RA + L +G++ED I I+G A + + RR+ I Sbjct: 483 RAQAVRDALKAAGIAEDHIVLKKPETITGGA--------NAKEA--RRVQI 523 >gi|254495834|ref|ZP_05108746.1| IcmN (DotK) [Legionella drancourtii LLAP12] gi|254354991|gb|EET13614.1| IcmN (DotK) [Legionella drancourtii LLAP12] Length = 189 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 14/146 (9%) Query: 200 SSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL 259 +++ + KGV T +ISI +F+ + + +L ++ + Sbjct: 50 DASIIKYIKKLRKKGVTVVTIGQDYMISIPAAY---LFEPQTPHIKWKAYKLLNEVAIFI 106 Query: 260 AHSTEVISIRGHTDASPFRNIARDNWR---LSLDRAYSAYQVLMKSGVSEDRISKISGFA 316 I + D+ + + R L+L R+ + L GV R G Sbjct: 107 KQ---FRKISIYIDS--YSSKYVSPQREHALTLARSRIVSEYLWSQGVD-SRFIFTQGLG 160 Query: 317 HHRLKIASDPMN--SANRRIDILVED 340 + IA P SAN R++I Sbjct: 161 SDKPIIAYTPGGDYSANARVEIKFRR 186 >gi|218674007|ref|ZP_03523676.1| hypothetical conserved membrane protein [Rhizobium etli GR56] Length = 50 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKIASDP--MNSANRRIDILVEDR 341 + +L SGV ++ G A + A+D +ANRRI+IL++ R Sbjct: 1 TIASLLAASGVPTGQLKS-QGRAATQPLAANDSREGRAANRRIEILIQKR 49 >gi|319641322|ref|ZP_07996019.1| outer membrane protein [Bacteroides sp. 3_1_40A] gi|317387068|gb|EFV67950.1| outer membrane protein [Bacteroides sp. 3_1_40A] Length = 474 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 9/131 (6%) Query: 201 STLSGLVADNIVKGVLFETTRTGILISIIDQ----RNTPMFDKSSSIPLPETIV-VLQKI 255 + K + E ++ + D F +++ + L ++ Sbjct: 338 KDKQNPDSLVSNKFITAEGHNPMVVNHVSDSCIGAPVYFFFTLNTARLTDVSQKLNLDEL 397 Query: 256 GEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS-- 313 V + + G D+S + N LS RA L + G+ +RI+KIS Sbjct: 398 ARVAKKYDLHVRVTGAADSS--TGTSGINDSLSQSRADFIVSELKQRGIPAERITKISRG 455 Query: 314 GFAHHRLKIAS 324 G A H+ A+ Sbjct: 456 GIADHQPTEAN 466 >gi|292491142|ref|YP_003526581.1| hypothetical protein Nhal_1021 [Nitrosococcus halophilus Nc4] gi|291579737|gb|ADE14194.1| conserved hypothetical protein [Nitrosococcus halophilus Nc4] Length = 237 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 50/166 (30%), Gaps = 23/166 (13%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 Q+ I L ++ + + T ++ Q +F S+ +L Sbjct: 59 QENQVAIYEALMKEFEKDLERWDARIDSDT---LAFEFQSPEVLFATGSTEIRQRFKEIL 115 Query: 253 QKIG-------EVLAHSTEVISIRGHTDASPFRN-----IARDNWRLSLDRAYSAYQVLM 300 + S + I I GHT + N LS R S + Sbjct: 116 ADFFPRYLVILKHYKDSIDEIRIEGHTSSVWNNQVSETEAYFLNMLLSQGRTRSVLHYVY 175 Query: 301 KS-GVSEDRI-----SKISGFAHHRLKIAS--DPMNSANRRIDILV 338 + V DR GF+ RL + + + +RR+ V Sbjct: 176 ELPKVESDRGWVKRHFAAVGFSSSRLVLDDQGNEDRARSRRVSFRV 221 >gi|110589614|gb|ABG77309.1| outer membrane protein A [Acinetobacter baumannii] Length = 273 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%) Query: 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRA 292 FD + S + + K+ E L+ I GHTD + + N RLSL RA Sbjct: 210 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNT---GPRKLNERLSLARA 266 Query: 293 YSAYQVL 299 S L Sbjct: 267 NSVKSAL 273 >gi|323455133|gb|EGB11002.1| hypothetical protein AURANDRAFT_71054 [Aureococcus anophagefferens] Length = 1595 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Query: 285 WRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLK---IASDPMNSANRRIDI 336 LS RA + Q ++ G+ DR+ GFA R + + + NRR+++ Sbjct: 651 MGLSTARADAVKQFILACGIEPDRVYA-QGFAGTRRLTGDVIDETVGHVNRRVEV 704 >gi|328473818|gb|EGF44653.1| hypothetical protein VP10329_14185 [Vibrio parahaemolyticus 10329] Length = 1592 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 100/316 (31%), Gaps = 33/316 (10%) Query: 39 DFMTVLMAFFLVMWIINATDDDTKK-AIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNK 97 D MT +A + + +A + K+ A F G ++ A+ F + Sbjct: 468 DLMTSSVA---LTFGFSAFKESRKELAKAITFANQGLDINQAAALAFRKS--------GM 516 Query: 98 IDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDL 157 I + L G+ ++ + DL Sbjct: 517 NISFIKRELDVIKASLITGTFSENSTRLARSWFNGSVMEKMNRAFPILESGSSLVDLYDL 576 Query: 158 CKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLF 217 + + + + E +S+ + ++ K Q+ A+ + + + N Sbjct: 577 VQKENELEKKSLEAKEDFDAVSQSYLQSISVIKAYQEWAQALDDAKNLINGSNGESIAHI 636 Query: 218 ETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASP 276 R G+ I I + N + + V Q + + +L + + +SI GH Sbjct: 637 VEDRQGLAIHINFKFNEWQYGNEHGKLRTDIKQVCQNLAQLMLDNPSYKLSIEGHAGRI- 695 Query: 277 FRNIARDNWRLSLDRAYSAYQVLMKSGVS---EDRISKISGFAHHRLKIASDPM------ 327 + N ++ RA + ++ + E+R+ S + + + A Sbjct: 696 --GSSDANDIVAAKRAKTVTNAIIS--IDSNLEERVYTAS-YGNTQPLTADGTKSDMSQT 750 Query: 328 -----NSANRRIDILV 338 + +RR+++ + Sbjct: 751 GDSAPAALDRRVEVRL 766 >gi|319945500|ref|ZP_08019760.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Lautropia mirabilis ATCC 51599] gi|319741286|gb|EFV93713.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Lautropia mirabilis ATCC 51599] Length = 361 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 66/239 (27%), Gaps = 22/239 (9%) Query: 86 EQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKN 145 P +Q + L E V + ++ L L + C Sbjct: 99 GGFPRASLAQAQGILDQLEAGQNPDVSETPLVNDARRLRDDLWARHDRLRQDTEGMQCAA 158 Query: 146 SLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSG 205 +E + I + P + + ++L K + Sbjct: 159 QRLACAE-----VELVHAGNEIRQGGWRHASPYIQIAEDLTEEAEKLAAQCKPKQVVSAP 213 Query: 206 LVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHS--- 262 + + V+ + + R + LPE L EVL Sbjct: 214 VEKPAVPAPVIEAPAMPTLDVRFRFDR------SGVADILPEDRQKLMDFAEVLKGHGPN 267 Query: 263 -TEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRI-SKISGFAHHR 319 +V+ + GHTD N RLS+ RA + L + GV R+ ++ Sbjct: 268 EHQVLKLMGHTDRL---GNRAYNERLSMRRAVTVRDELQRLGV---RLPMEVRAMGATE 320 >gi|317404170|gb|EFV84613.1| OmpA family domain-containing protein [Achromobacter xylosoxidans C54] Length = 312 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Query: 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAY 293 FD + E+ L ++G++L + + + + GHTD N LS RA Sbjct: 217 VYFDTDKAEVKAESKAALDEMGKLLNANPKLKVYVVGHTDNQ---GTLAGNLELSQKRAD 273 Query: 294 SAYQVLMKS 302 + + L Sbjct: 274 AVVKALEAG 282 >gi|16751949|ref|NP_444533.1| TraP protein [Plasmid pIPO2T] gi|16610017|emb|CAC82763.1| TraP protein [Plasmid pIPO2T] Length = 186 Score = 49.6 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 60/175 (34%), Gaps = 8/175 (4%) Query: 166 SINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGIL 225 + + + S + + L +++ + L + + + Sbjct: 15 ACSSPPKPPVVDGSNRHAINTPETAEVIALRAQLAQSEEKLRVEQARPVIAPTVLQPAPP 74 Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 + + + F + + +Q + L + I +RG TD Sbjct: 75 PPVRSRTFSVHFPYNDTNFHLSADDRVQLLP--LLANARRIEVRGRTDGQRPSTADE--- 129 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIAS--DPMNSANRRIDILV 338 +++L+RA +A + L+ GVS I ++ + + S NRR+DI V Sbjct: 130 KIALNRALAAQRFLIGQGVSPA-IISVNYVSAGDYVADNFSAVGRSLNRRVDIEV 183 >gi|167949297|ref|ZP_02536371.1| hypothetical protein Epers_23486 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 117 Score = 49.6 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 6/33 (18%), Positives = 14/33 (42%), Gaps = 3/33 (9%) Query: 307 DRISKISGFAHHRLKIASDP--MNSANRRIDIL 337 DR+ G+ + + NRR++++ Sbjct: 17 DRLLA-RGYGEDHPVADNGTSEGRAKNRRVELI 48 >gi|330825361|ref|YP_004388664.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans K601] gi|329310733|gb|AEB85148.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601] Length = 234 Score = 49.6 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 12/105 (11%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAY 296 F +S+ P L+++ LA I++ G TD++ A N L+ RA + Sbjct: 127 FPFASAQLGPSARAALREVAPRLAQ-ASEITLSGRTDST---GPAATNDGLAKARAQAVL 182 Query: 297 QVLMKS--GVSEDRISKISG---FAHHRLKIASDPMNSANRRIDI 336 + L+ ++ G +A S + NRR++I Sbjct: 183 RQLLALSPAIAAHVSVDAQGTCCYAES---NDSPAGRANNRRVEI 224 >gi|284035432|ref|YP_003385362.1| hypothetical protein Slin_0499 [Spirosoma linguale DSM 74] gi|283814725|gb|ADB36563.1| hypothetical protein Slin_0499 [Spirosoma linguale DSM 74] Length = 445 Score = 49.6 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 29/270 (10%), Positives = 73/270 (27%), Gaps = 12/270 (4%) Query: 65 IEQYFNPFGKNLMTASKGIFDEQNPPER-SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQ 123 + + F P + + + + P R + + ++ + + Sbjct: 166 VPESFMPQLVDKVGLHQIVAGAAGPARRTPADAPGKPVATAAPVRPTIAYDVADDSDSDN 225 Query: 124 YQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKEKI 183 + + L + + ++ DL + S Sbjct: 226 GALTKWGVGILVALALAFGGYYLYQNTQKYSDGQEETADLATVTSDTIQADTVTRSLAVP 285 Query: 184 LAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM----FDK 239 + I++ + + + E T ++ R + F Sbjct: 286 KEQPAATAPKSATTAIATPATATATTAVAGSLTREMTPYLTNPTLPKGRFFALPGIAFQP 345 Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 S + + ++ +L + I + G+ + + N LS R Q Sbjct: 346 GSLSMTATSQASINELSTLLKTYPQLQIQLVGYANDAQVG---ITNKGLSFKRVNLIKQQ 402 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMN 328 L+ SG++ R+ I G + +D Sbjct: 403 LITSGINFQRVDAI-GRGTG--VMRNDTSR 429 >gi|330445248|ref|ZP_08308900.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489439|dbj|GAA03397.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 332 Score = 49.2 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 9/104 (8%) Query: 240 SSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQV 298 + L ++ + + E I G D A N ++S +RA + Sbjct: 234 GQTKLNDYGRYNLGEVIATMQANPEVNAQIIGRADKV---GSAAINEKVSAERAANVANY 290 Query: 299 LMKSGVSEDRISKISGFAHHRLKIASDPMNSAN---RRIDILVE 339 L +G+ R+ +S +++ +D N R + I+++ Sbjct: 291 LEANGIDASRL-TVSSVSYNDPI-KTDAATKTNYVQRSVQIILK 332 >gi|311697110|gb|ADP99982.1| conserved hypothetical protein, secreted [marine bacterium HP15] Length = 141 Score = 49.2 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 6/71 (8%) Query: 268 IRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM 327 I G T RL+L RA SA L+ GVS +I I+ + + Sbjct: 67 INGRTSTLRPSKRDE---RLALARAVSARDYLVAHGVSPLKIM-INYVSAADFIADNGTP 122 Query: 328 NSA--NRRIDI 336 N+R+DI Sbjct: 123 EGRYLNQRVDI 133 >gi|218129608|ref|ZP_03458412.1| hypothetical protein BACEGG_01185 [Bacteroides eggerthii DSM 20697] gi|217988338|gb|EEC54661.1| hypothetical protein BACEGG_01185 [Bacteroides eggerthii DSM 20697] Length = 496 Score = 49.2 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 10/107 (9%) Query: 234 TPMFDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 F+ S + P +V L ++ V + + G D+ N LS RA Sbjct: 383 FFFFELGTSHLTDPSQLVNLDELARVAKKYGLKVKVTGAADS--ATGTIGINNALSASRA 440 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR--RIDIL 337 L K G+S DR++K +G P + NR R+++ Sbjct: 441 DYIASELNKRGLSPDRMTK-TGEGG---ISDYAPTEA-NRHTRVELF 482 >gi|251733441|emb|CAR82470.1| pal [Mesorhizobium loti] Length = 87 Score = 49.2 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 5/85 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ + L + + L + I + GH D N L RA + Sbjct: 1 TDSTSIRADAQTTLARQAQWLNQYKQYAIVVEGHADER---GTREYNLALGARRAAATRD 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322 L+ GVS R+ IS + R Sbjct: 58 FLVAKGVSASRLKTIS-YGKERPVA 81 >gi|160899374|ref|YP_001564956.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1] gi|160364958|gb|ABX36571.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1] Length = 174 Score = 49.2 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 44/127 (34%), Gaps = 9/127 (7%) Query: 214 GVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTD 273 V + + + F + + L + + + I G+ D Sbjct: 57 MVPVVLEEDVARVVVENGVVKFYFASAKAELAVGANEALADVVAGVKG-GKRAVISGYHD 115 Query: 274 ASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRR 333 A+ A N L+ RA + L GV+E+++ +L+ + RR Sbjct: 116 AT---GSAELNAELAKKRALAVQAALSALGVAEEKVELKK---PEQLQADGSNAEA--RR 167 Query: 334 IDILVED 340 +++++ D Sbjct: 168 VEVILVD 174 >gi|170745045|ref|YP_001766503.1| hypothetical protein Mrad2831_6338 [Methylobacterium radiotolerans JCM 2831] gi|170659207|gb|ACB28260.1| VirBTraTrw family protein [Methylobacterium radiotolerans JCM 2831] Length = 185 Score = 49.2 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 11/168 (6%) Query: 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQR 232 P +S + + Q L ++ +V + + Sbjct: 20 PKPPTVSGRDRVPVNSPVAAQTLQQEAFPPAPVVVQRQGGPQAVQRQQAPRAAARPLYPV 79 Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 + F +S+ P T + + ++A + +RG TD + R++ RA Sbjct: 80 VSVQFPWNSAQFRP-TPAQVAHLRGLIAAGVAHVQVRGRTDNPNPSSGDE---RIARGRA 135 Query: 293 YSAYQVLMKSGVSEDRI-SKISGFAHHRLKIASD---PMNSANRRIDI 336 +A L+ GV I +R +++ + NRR+DI Sbjct: 136 EAAKDWLIGEGVPSGIIDLNFVSAGDYR---SNNRLSDGRALNRRVDI 180 >gi|251733491|emb|CAR82495.1| pal [Sinorhizobium medicae] gi|251733493|emb|CAR82496.1| pal [Sinorhizobium medicae] gi|251733495|emb|CAR82497.1| pal [Sinorhizobium medicae] Length = 87 Score = 49.2 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ + L + + LA ++I GH D N L RA + Sbjct: 1 TDSTSIRADAQTTLDRQAQWLAKYPNYAVTIEGHADER---GTREYNLALGARRAAATRD 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322 L+ GV +R+ IS + + Sbjct: 58 YLVSRGVPGNRMRTIS-YGKEKPVA 81 >gi|225620699|ref|YP_002721957.1| outer membrane protein [Brachyspira hyodysenteriae WA1] gi|225215519|gb|ACN84253.1| outer membrane protein [Brachyspira hyodysenteriae WA1] Length = 203 Score = 49.2 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 F ++I + + +++ ++ I + G++ A N++LS R+ + Sbjct: 84 FGFDNTIEIGTYKEAYNLVYQIINNNPGVRIMVEGNSSKE---GPAPYNYKLSQRRSDKS 140 Query: 296 YQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANRRIDILV 338 + ++K GV ++ K + F + + NRR + ++ Sbjct: 141 FNYIIKLGVENSKLLK-NAFGEALPEYPTLKE---NRRSEFII 179 >gi|91781675|ref|YP_556881.1| putative cytochrome c oxidase [Burkholderia xenovorans LB400] gi|91685629|gb|ABE28829.1| Putative cytochrome c oxidase [Burkholderia xenovorans LB400] Length = 538 Score = 49.2 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S++P V +H ++ G TDA+ A N +L+ RA + Sbjct: 442 FDTGKSTLPAEAKAAVEAAAAYAKSHPDAKFTLSGFTDAT---GSADLNAKLAKSRAEAV 498 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +G++ED I I+G SD + RR+ I Sbjct: 499 RDALKAAGIAEDHIILKKPETITG--------GSDAKEA--RRVQI 534 >gi|289208674|ref|YP_003460740.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] gi|288944305|gb|ADC72004.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix] Length = 253 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 58/185 (31%), Gaps = 24/185 (12%) Query: 177 PLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPM 236 + + ++ + L I S L +++ + +++ + + Sbjct: 50 QVERSSAAHVEVRNEATALRAAIYSVLEEEFREDLPRW---NAELDRDTLTLRFREPEVL 106 Query: 237 FDKSSSIPLPETIVVLQKIG-------EVLAHSTEVISIRGHTDASPFRNI-----ARDN 284 F++SS+ P +L A + I GHT + + N Sbjct: 107 FERSSASIRPRFETILDDFMPRYAEQLRPFADVIREVRIEGHTSSEWAGSDDAMDAYFGN 166 Query: 285 WRLSLDRAYSAYQV------LMKSGVSEDRISKISGFAHHRLK--IASDPMNSANRRIDI 336 LS R + + L + R++ + G + R + A+RR++ Sbjct: 167 MDLSQRRTRAVLEHAYRLEPLQEDDWFRSRVAAV-GLSSSRRVLDADGQEDHEASRRVEF 225 Query: 337 LVEDR 341 V Sbjct: 226 SVLTD 230 >gi|242237467|ref|YP_002985648.1| hypothetical protein Dd703_0007 [Dickeya dadantii Ech703] gi|242129524|gb|ACS83826.1| conserved hypothetical protein [Dickeya dadantii Ech703] Length = 248 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 36/179 (20%) Query: 193 QDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 ++ + + L D++ + + Q +F+ +S+ PE +L Sbjct: 55 KNTLQGLGQALQHEFKDDLKRWHATIDEDLTVRF----QEPNILFNNNSADLKPEFKAIL 110 Query: 253 Q-KIGEVLA--------HSTEVISIRGHTDASPFRN-----IARDNWRLSLDRAYSAYQV 298 I L + E I I GHT N LS R S + Sbjct: 111 DEFIPRYLNIITNPKYIDNIEEIRIEGHTSTVWRAGVSEKEAYIHNMELSQSRTRSTLEY 170 Query: 299 LMKSGV--SEDRI-------SKISGFAHHRLKIASD---------PMNSANRRIDILVE 339 +M V + + + GF+ R + + ++R++ V Sbjct: 171 IMNMSVVSEPESMFSWFKGHVRAIGFSSARPVDSEGKVIISADKIEDRARSQRVEFRVR 229 >gi|307564567|ref|ZP_07627107.1| OmpA family protein [Prevotella amnii CRIS 21A-A] gi|307346725|gb|EFN92022.1| OmpA family protein [Prevotella amnii CRIS 21A-A] Length = 360 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 33/255 (12%), Positives = 69/255 (27%), Gaps = 24/255 (9%) Query: 62 KKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKIDLSIDEHITKNSVDLKIGSTNQK 121 I +NP + GI + + + + D +T + + ++ Sbjct: 115 FTNIFCEYNPDRAFELIGEAGIGYTIFYGDNRAVSPDNTLDDTELTSKTGLQFAFNFGEE 174 Query: 122 KQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEENYFLPPLSKE 181 KQ+Q + + ++ G L + S Sbjct: 175 KQFQFYVEPAVLWNLTHGPGDAVQFNKHAAQLGLFLGVNYKFMTSNGTHNFKVY------ 228 Query: 182 KILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241 K + L ++++ ++ + + + + + I F + Sbjct: 229 --DVAAMNKEINSLRDQLAAKPKEVIKEVVKEVPVEAQKELCVEDLIF-----VTFAQGK 281 Query: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + L K+ E + I G + N RLS RA + L Sbjct: 282 HYLTNDAKAALDKVPE-----GRHVQIVG---TASPEGPKELNDRLSQARADEVAKYLQN 333 Query: 302 SGVSEDRISKISGFA 316 GV I +G Sbjct: 334 KGVV---IDSATGKG 345 >gi|323935681|gb|EGB31998.1| OmpA family protein [Escherichia coli E1520] Length = 137 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 29/89 (32%), Gaps = 4/89 (4%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL 320 A G G + Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKNIP 137 >gi|82777964|ref|YP_404313.1| putative outer membrane protein [Shigella dysenteriae Sd197] gi|81242112|gb|ABB62822.1| putative outer membrane protein [Shigella dysenteriae Sd197] gi|315253132|gb|EFU33100.1| OmpA family protein [Escherichia coli MS 85-1] gi|323941377|gb|EGB37561.1| OmpA family protein [Escherichia coli E482] gi|323946268|gb|EGB42301.1| OmpA family protein [Escherichia coli H120] Length = 137 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 29/89 (32%), Gaps = 4/89 (4%) Query: 233 NTPMFDKSSSIPLPETIVVLQKIGEVLAHST-EVISIRGHTDASPFRNIARDNWRLSLDR 291 + +F K+ LPE+ +Q + LA + + GHTD N LSL R Sbjct: 52 DAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNY---GEDSYNEGLSLKR 108 Query: 292 AYSAYQVLMKSGVSEDRISKISGFAHHRL 320 A G G + Sbjct: 109 ANVVADAWAMGGQIPRSNLTTQGLGKNIP 137 >gi|254227706|ref|ZP_04921137.1| OmpA family protein [Vibrio sp. Ex25] gi|262395752|ref|YP_003287605.1| hypothetical protein VEA_000452 [Vibrio sp. Ex25] gi|151939748|gb|EDN58575.1| OmpA family protein [Vibrio sp. Ex25] gi|262339346|gb|ACY53140.1| hypothetical protein VEA_000452 [Vibrio sp. Ex25] Length = 1591 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 93/315 (29%), Gaps = 31/315 (9%) Query: 39 DFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPERSSQNKI 98 D MT +A + + +A + K+ F++ Sbjct: 467 DLMTSSVA---LAFGFSAFKESRKEL-------TKAIRFANKGLDFNQAAALAFRKSGMN 516 Query: 99 DLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLC 158 I + +L G+ ++ + DL Sbjct: 517 ISFIKRELDVIKANLITGTFSENSTRLARSWFNGSVMEKMNRAFPILESGSSLVDLYDLV 576 Query: 159 KSTDLEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFE 218 + + + + E +S+ + ++ K Q+ A+ + + + + + Sbjct: 577 QKENELEKKSLEAKEDFDAVSQSYLQSISVIKAYQEWAQALDDAKNVINGSDGEEIAHIV 636 Query: 219 TTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGE-VLAHSTEVISIRGHTDASPF 277 G+ I I + N + V + + + +L + + +SI GH Sbjct: 637 EDSQGLAIHINFKFNEWQHGNEHGKLRTDIKQVCKYLSQLMLDNPSYKVSIEGHAGRI-- 694 Query: 278 RNIARDNWRLSLDRAYSAYQVLMKSGVSE---DRISKISGFAHHRLKIASDPM------- 327 + N ++ RA + ++ + +R+ S + + + A Sbjct: 695 -GSSDANALVAAKRAKTVTNAIIS--IDPSLEERVYTAS-YGNTQPLTADSTKSDMSQTG 750 Query: 328 ----NSANRRIDILV 338 + +RR+++ + Sbjct: 751 DSAPAALDRRVEVRL 765 >gi|299142777|ref|ZP_07035906.1| major outer membrane protein OmpA [Prevotella oris C735] gi|298575806|gb|EFI47683.1| major outer membrane protein OmpA [Prevotella oris C735] Length = 389 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 63/195 (32%), Gaps = 7/195 (3%) Query: 125 QRLENNIFYLSNSQQSEHCKNSLTRDS--EKGKDLCKSTDLEKSINKEENYFLPPLSKEK 182 + N + + + N+ +K L L + K P ++ K Sbjct: 180 EAGWNRMEDDFDGLEGAALLNTHNGRGWEDKDNHLYAEVGLTFKLGKATWNKTPDVAAIK 239 Query: 183 ILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242 L+ + L ++ + + + + + I + F+ Sbjct: 240 ALSQSQIDALNSQLNDANAE-NDKLRKQLAEKPKTTVLTKSVK-EFITTPISVFFNIGKI 297 Query: 243 IPLP-ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301 + +V ++ + + + I + G+ D+S N RLS RA + + L+K Sbjct: 298 NVALLKDLVNVRALAKYAIANKSNILVTGYADSS--TGTPAINQRLSEQRANTVLEELVK 355 Query: 302 SGVSEDRISKISGFA 316 GV +I + Sbjct: 356 MGVDRSKIRTAASGG 370 >gi|10955226|ref|NP_044255.1| hypothetical protein R751p46 [Enterobacter aerogenes] gi|1572563|gb|AAC64458.1| Upf30.5 [Enterobacter aerogenes] Length = 142 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 11/108 (10%) Query: 238 DKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 S+ P++ Q E L A + +I I G T L+L RA Sbjct: 33 KSGVSVSFPDSSATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADE---ALALRRA 89 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 SA L+ GVS +I ++ + + N+R+DI V Sbjct: 90 LSARSYLVARGVSPLKIM-VNFASAADFVADNSTAEGRRENQRVDIEV 136 >gi|254882132|ref|ZP_05254842.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|255013736|ref|ZP_05285862.1| putative outer membrane protein [Bacteroides sp. 2_1_7] gi|254834925|gb|EET15234.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 480 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 5/94 (5%) Query: 234 TPMFDKSSSIPLPETIV-VLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 F +++ + L ++ V + + + G D+S + N LS+ RA Sbjct: 376 YFFFALNTTHLTDTSQRLNLDELARVAKKYSLSVRVTGAADSS--TGTSSINDSLSISRA 433 Query: 293 YSAYQVLMKSGVSEDRISKIS--GFAHHRLKIAS 324 L + G+ RI ++S G A + A+ Sbjct: 434 GFITAELEQRGIPAKRIIRVSKGGIADYMPVEAN 467 >gi|251733497|emb|CAR82498.1| pal [Sinorhizobium meliloti] gi|251733499|emb|CAR82499.1| pal [Sinorhizobium meliloti] gi|251733501|emb|CAR82500.1| pal [Sinorhizobium meliloti] Length = 87 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ + L + + LA I+I GH D N L RA + Sbjct: 1 TDSTSIRADAQATLDRQAQWLAKYPNYGITIEGHADER---GTREYNLALGARRAAATRD 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKI 322 L+ GV +R+ IS + + Sbjct: 58 YLVSRGVPGNRMRTIS-YGKEKPVA 81 >gi|251733463|emb|CAR82481.1| pal [Agrobacterium rhizogenes] Length = 87 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 5/88 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 S+ + L + + LA I++ GH D N L RA + Sbjct: 1 TDSTSIRSDASQTLDRQAQWLARYPNYAITVEGHADER---GTREYNLALGARRAAATKD 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD 325 L GV R+ IS + R D Sbjct: 58 YLASRGVPAQRMKTIS-YGKERPVATCD 84 >gi|325498706|gb|EGC96565.1| hypothetical protein ECD227_2803 [Escherichia fergusonii ECD227] Length = 246 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 17 IKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQY 68 +KK+ + W I YAD MT +M FLV+ + + + + + Sbjct: 8 VKKRRGDEAEK---PFW-ISYADLMTAMMVLFLVVMVASLSSVTQRIQRAEQ 55 >gi|241764446|ref|ZP_04762469.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN] gi|241366139|gb|EER60722.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN] Length = 181 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 44/114 (38%), Gaps = 11/114 (9%) Query: 226 ISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNW 285 + + + F + + L + + +A + + G DA+ A N Sbjct: 76 VRVENGVVKFYFATAKAELAAGANEALADVVKGVAE-GKKAVVSGFHDAT---GDAALNA 131 Query: 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM-NSANRRIDILV 338 L+ RA++ L GV+ED++ + + + N+ RR+++ + Sbjct: 132 ELAKQRAFAVRDALQALGVAEDKVEL------KKPEETTATGSNAEARRVEVTL 179 >gi|325269069|ref|ZP_08135690.1| hypothetical protein HMPREF9141_0899 [Prevotella multiformis DSM 16608] gi|324988690|gb|EGC20652.1| hypothetical protein HMPREF9141_0899 [Prevotella multiformis DSM 16608] Length = 381 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 36/130 (27%), Gaps = 14/130 (10%) Query: 187 KRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLP 246 + + + L +I+ + + V +S F + Sbjct: 251 RDQAEIDALNAQINELRNRKPEVITKEVVKEVPAVKEFTVS---DLVFVTFAQGKYALTN 307 Query: 247 ETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSE 306 + L I E + + G + N RLS RA L GV+ Sbjct: 308 DAKSALNNIKE-----GSHVQVVG---TASPEGSKEINDRLSQARADVVADYLKARGVN- 358 Query: 307 DRISKISGFA 316 + + +G Sbjct: 359 --VDEATGKG 366 >gi|242310642|ref|ZP_04809797.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239523040|gb|EEQ62906.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 242 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 56/194 (28%), Gaps = 24/194 (12%) Query: 163 LEKSINKEENYFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRT 222 + + + L + E + K+ + K + + L G + + Sbjct: 31 VYMVVISKAEKRLATQNAELLELNKQMSDIAKTYKNLQAELYGDLVAEFSGDLEKWNAEI 90 Query: 223 GILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVL---------AHSTEVISIRGHTD 273 ++ + +FD+ +L E I I GHT Sbjct: 91 DEDNTVRFREPEILFDQGKKEVKLRFKQILDDFFPRYVNILTQPKYKGDIEEIRIEGHTS 150 Query: 274 ASPFRN-----IARDNWRLSLDRAYSAYQV-LMKSGVSEDR-----ISKISGFAHHRLKI 322 N LS RA + + + ED+ + + +G + + Sbjct: 151 TEWQNAKSLEDRYLGNAELSQARALEVLKYCFNNTQIKEDKQWLIGVLRANGLSFAKPLE 210 Query: 323 ASDPMNSANRRIDI 336 + + +RR++ Sbjct: 211 SVE----LSRRVEF 220 >gi|31795134|ref|NP_857992.1| putative outer membrane protein [uncultured bacterium] gi|49176934|ref|YP_025437.1| hypothetical protein pJP4_73 [Ralstonia eutropha JMP134] gi|72384319|ref|YP_293672.1| hypothetical protein Reut_D6517 [Ralstonia eutropha JMP134] gi|77993246|ref|YP_358836.1| putative outer membrane protein [IncP-1beta multiresistance plasmid pB8] gi|84310702|ref|YP_447032.1| hypothetical protein pTP6_37 [uncultured bacterium] gi|115345512|ref|YP_771697.1| hypothetical protein Bamb_6620 [Burkholderia ambifaria AMMD] gi|121582564|ref|YP_974093.1| hypothetical protein Ajs_4259 [Acidovorax sp. JS42] gi|319765131|ref|YP_004129067.1| hypothetical protein Alide_4488 [Alicycliphilus denitrificans BC] gi|13661673|gb|AAK38017.1| Upf30.5 [Comamonas testosteroni] gi|31746378|emb|CAD97503.1| putative outer membrane protein [uncultured bacterium] gi|39777514|gb|AAR31089.1| Upf30.5 [Ralstonia eutropha JMP134] gi|72123672|gb|AAZ65815.1| hypothetical protein Reut_D6517 [Ralstonia eutropha JMP134] gi|77733999|emb|CAI10763.1| putative outer membrane protein [IncP-1beta multiresistance plasmid pB8] gi|84094982|emb|CAJ15604.1| Upf30.5 protein [uncultured bacterium] gi|89211885|gb|ABD63300.1| Upf30.5 [Proteus mirabilis] gi|89211891|gb|ABD63305.1| Upf30.5 [Bordetella bronchiseptica] gi|115286689|gb|ABI92163.1| conserved hypothetical protein [Burkholderia ambifaria AMMD] gi|120608620|gb|ABM44358.1| conserved hypothetical protein [Acidovorax sp. JS42] gi|317119818|gb|ADV02305.1| hypothetical protein Alide_4488 [Alicycliphilus denitrificans BC] Length = 143 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 11/108 (10%) Query: 238 DKSSSIPLPETIVVLQKIGEVL-----AHSTEVISIRGHTDASPFRNIARDNWRLSLDRA 292 S+ P++ Q E L A + +I I G T L+L RA Sbjct: 34 KSGVSVSFPDSSATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADE---ALALRRA 90 Query: 293 YSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSA--NRRIDILV 338 SA L+ GVS +I ++ + + N+R+DI V Sbjct: 91 LSARSYLVARGVSPLKIM-VNFASAADFVADNSTAEGRRENQRVDIEV 137 >gi|296160425|ref|ZP_06843242.1| cytochrome c oxidase, subunit II [Burkholderia sp. Ch1-1] gi|295889406|gb|EFG69207.1| cytochrome c oxidase, subunit II [Burkholderia sp. Ch1-1] Length = 538 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 19/106 (17%) Query: 237 FDKS-SSIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSA 295 FD S++P V AH ++ G TDA A N +L+ RA + Sbjct: 442 FDTGKSTLPADAKAAVEAAAAYAKAHPDAKFTLSGFTDA---SGSADLNAKLAKSRAEAV 498 Query: 296 YQVLMKSGVSEDRIS-----KISGFAHHRLKIASDPMNSANRRIDI 336 L +G++ED I I+G SD + RR+ I Sbjct: 499 RDALKAAGIAEDHIILKKPETITG--------GSDAKEA--RRVQI 534 >gi|251733469|emb|CAR82484.1| pal [Rhizobium tropici] Length = 87 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 29/88 (32%), Gaps = 5/88 (5%) Query: 239 KSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDASPFRNIARDNWRLSLDRAYSAYQ 297 SS + L + + LA I++ GH D N L RA + Sbjct: 1 TDSSSIRADASQTLDRQAQWLARYPNYAITVEGHADER---GTREYNLALGARRAAATKD 57 Query: 298 VLMKSGVSEDRISKISGFAHHRLKIASD 325 L GV R+ IS + R D Sbjct: 58 YLASRGVPAQRMKTIS-YGKERPVATCD 84 >gi|83311569|ref|YP_421833.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Magnetospirillum magneticum AMB-1] gi|82946410|dbj|BAE51274.1| Outer membrane protein and related peptidoglycan-associated lipo protein [Magnetospirillum magneticum AMB-1] Length = 239 Score = 48.8 bits (1