RPSBLAST alignment of GI: 254780529 and protein with PDBid: 3cyp
>3cyp_B Chemotaxis protein MOTB; bacterial flagellar motor, peptidoglycan binding, bacterial flagellum, flagellar rotation, inner membrane, membrane; 1.60A {Helicobacter pylori} PDB: 3cyq_B* Length = 138
Score = 65.7 bits (160), Expect = 1e-11
Identities = 24/108 (22%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 237 FDKSSSIPL-PETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRN-IARDNWRLSLDRA 292
F+ ++S + + ++ +++I +++ + I++RG TD +P + ++ L+ +RA
Sbjct: 7 FENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRA 66
Query: 293 YSAYQVLMKSGVSEDRISKIS-GFAHHRLKIASDPMNSANRRIDILVE 339
Y +VL++ GV+ +++S S G + S N R++I
Sbjct: 67 YRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 114