RPSBLAST alignment of GI: 254780529 and protein with PDBid: 3khn

>3khn_A MOTB protein, putative; structural genomics, OMPA-like domain, PSI-2, protein structure initiative; 2.03A {Desulfovibrio vulgaris str} Length = 174

 Score = 40.6 bits (94), Expect = 5e-04
 Identities = 33/170 (19%), Positives = 71/170 (41%), Gaps = 13/170 (7%)

Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQRNTPM 236
           +S E +   + ++ L +  ++  + +      N V+GV+        I + +  +    +
Sbjct: 1   MSLETV---RLQRELIEAQRQTYNEMRTYFTVNGVEGVIGAVFDEGVITLRVPSEV---L 54

Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDA--SPFRNIARDNWRLSLDRAY 293
           F   +    P    VL  + ++     E  I+I+G TD          +DNW +S  R+ 
Sbjct: 55  FAPGAVELAPGADRVLATLKDLFIRRREQNINIKGFTDDVQPSANARFKDNWEVSALRSV 114

Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341
           +  +  + +G+   R++  +G           SD   + NRR++ ++E R
Sbjct: 115 NVLRYFLGAGIEPARLT-ATGLGELDPLFPNTSDENRARNRRVEFVLERR 163