RPSBLAST alignment of GI: 254780529 and SCOP domain: d1r1ma_

Alignment
>d1r1ma_ d.79.7.1 (A:) Outer membrane protein class 4, RmpM, C-terminal domain {Neisseria meningitidis [TaxId: 487]} Length = 140
 Score = 36.8 bits (84), Expect = 0.003
 Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 25/126 (19%)

Query: 236 MFDKSSSIPLPETIVVLQKIGEVLA-HSTEVISIRGHTDASPFRNIARDNWRLSLDRAYS 294
           +F         E    L+ + + L+  + + + + GHTD          N  LS  RAY 
Sbjct: 15  LFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFMGSDK---YNQALSERRAYV 71

Query: 295 AYQVLMKSGVSEDRISKIS---------------------GFAHHRLKIASDPMNSANRR 333
               L+ +GV   RIS +                        +  + + A       +RR
Sbjct: 72  VANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRR 131

Query: 334 IDILVE 339
           +D+ + 
Sbjct: 132 VDVKIR 137

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: OmpA-like
family: OmpA-like
domain: Outer membrane protein class 4, RmpM, C-terminal domain
species: Neisseria meningitidis [TaxId: 487]