HHsearch alignment for GI: 254780530 and conserved domain: PRK06937

>PRK06937 type III secretion system protein; Reviewed.
Probab=94.28  E-value=0.48  Score=27.01  Aligned_cols=104  Identities=7%  Similarity=0.077  Sum_probs=47.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             33578999999999999999999999999999999999999999999999999999999999999999998999999999
Q gi|254780530|r   42 ADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILK  121 (216)
Q Consensus        42 iDveaer~eAya~G~a~a~~e~~~~~e~e~~~l~~~Ha~eLeelR~~~~ee~A~~IA~~i~e~~~~le~~Is~~vArIL~  121 (216)
T Consensus        48 ~~A~~~~e~~~~~Gy~eG~~ea~~e~ae~i~~~----~~~~-------------------~~~~~~le~~l~~lv~~av~  104 (204)
T PRK06937         48 AEAREVYEQQKQLGYEAGLDEARTEQAELILET----VLQC-------------------QEFYRGIEQQMSEVVLEAVR  104 (204)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH-------------------HHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999999999999----9999-------------------99999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCC
Q ss_conf             9987799999999999999999504687618884888999999984587
Q gi|254780530|r  122 SVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGE  170 (216)
Q Consensus       122 PvL~e~l~~qAv~~la~~i~~~~~dg~~~~I~V~GP~~L~e~L~~~Lg~  170 (216)
T Consensus       105 kIlg~~d~~el~~~~v~~al~~v~~~~~v~I--~V~P~d~~~v~~~~~~  151 (204)
T PRK06937        105 KILNDYDDVERTLQVVREALALVSNQKQVVV--RVAPDQAGAVREQIAK  151 (204)
T ss_pred             HHHCCCCHHHHHHHHHHHHHHHHHCCCEEEE--EECHHHHHHHHHHHHH
T ss_conf             9865468389999999999999735973999--9994669999999999