BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780530|ref|YP_003064943.1| hypothetical protein
CLIBASIA_02085 [Candidatus Liberibacter asiaticus str. psy62]
(216 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780530|ref|YP_003064943.1| hypothetical protein CLIBASIA_02085 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040207|gb|ACT57003.1| hypothetical protein CLIBASIA_02085 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 216
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI
Sbjct: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL
Sbjct: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA
Sbjct: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
Query: 181 DTVEFSTKIFGSVIKTRLESWLSDVKAKIVSQQVSK 216
DTVEFSTKIFGSVIKTRLESWLSDVKAKIVSQQVSK
Sbjct: 181 DTVEFSTKIFGSVIKTRLESWLSDVKAKIVSQQVSK 216
>gi|315122278|ref|YP_004062767.1| hypothetical protein CKC_02650 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495680|gb|ADR52279.1| hypothetical protein CKC_02650 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 209
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/217 (64%), Positives = 167/217 (76%), Gaps = 13/217 (5%)
Query: 3 DAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHD 62
DA+LSRLEDF R+ SLSD L D + D QKE+DKAYQEGY AI D
Sbjct: 2 DAILSRLEDFGRVNSLSDVAAL----------DDETNYAKDIQKERDKAYQEGYAAAICD 51
Query: 63 RELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKS 122
RELYW+SKN+ +Q+SHDNEIADLRELFES TS+AI+ A+RDS KC S+SLE EV+RIL+S
Sbjct: 52 RELYWRSKNECLQQSHDNEIADLRELFESCTSEAISKAIRDSVKCLSNSLEYEVMRILES 111
Query: 123 VLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADT 182
VL+IG+SRKAAIEF+ +++D LKKGDCG I I PKN HSLIEECLGEYSS VCYE+++
Sbjct: 112 VLEIGISRKAAIEFSEIIIDLLKKGDCGHIKIQAPKNFHSLIEECLGEYSSMVCYEDSEK 171
Query: 183 VEFSTKIFGSVIKTRLESWLSDVK---AKIVSQQVSK 216
VEFS+KI G VI TRLESW SDVK A+ S ++SK
Sbjct: 172 VEFSSKICGGVITTRLESWFSDVKKIEARRFSNELSK 208
>gi|209547940|ref|YP_002279857.1| hypothetical protein Rleg2_0332 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533696|gb|ACI53631.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 209
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 83/167 (49%)
Query: 40 SIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAI 99
+ D + E+ AY +G+ A D ++++ + H E+ +L+ +E + IA
Sbjct: 39 PVIDVEAERRDAYAQGHAAATADLTEKYEAEAQTLAEVHARELEELKLRYEVEAAAVIAS 98
Query: 100 AVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKN 159
+RD + + + + V+ L+ +AA A ++ D + +G G IV+ GP
Sbjct: 99 RIRDIAEEVAQLVSAGAAIAIAPVMTEALAARAAESLAVLLRDAILEGAAGAIVVRGPSR 158
Query: 160 LHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVK 206
L L+ LGE++ AV + D ++ + +I SVI TR+ +W + +K
Sbjct: 159 LFELLATELGEHAEAVRHVETDDIDLAVEIGESVIVTRMSAWAASLK 205
>gi|222084879|ref|YP_002543408.1| hypothetical protein Arad_0901 [Agrobacterium radiobacter K84]
gi|221722327|gb|ACM25483.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 210
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 4/208 (1%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTA--DVTFSSIADFQKEQDKAYQEGYNK 58
MS + L+DFS L L + I + A D D + E+ AY +G+
Sbjct: 1 MSPTLSRYLKDFS--AELPPSAALPDLIFDETPAFLDSPVEPPIDIEAERRDAYAQGHEA 58
Query: 59 AIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIR 118
A + L + + + +H E+ LR +E ++ IA + ++ E
Sbjct: 59 ATQELLLRQQQALEAMAEAHRGEMDTLRTRYEEQAAERIAADMTQIATILGQTVSIEAAA 118
Query: 119 ILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYE 178
+L ++ L+ KA + A +V + G G + + GP++L ++ L ++ + + +
Sbjct: 119 VLAPIMTEALTAKAVADLADLVAASILDGAVGPVTVSGPRHLFDILHARLDDHGALLRHV 178
Query: 179 NADTVEFSTKIFGSVIKTRLESWLSDVK 206
AD V+ S I SV+ TR+ +W + ++
Sbjct: 179 EADDVDLSVTIGESVLVTRMSAWAASLR 206
>gi|241203118|ref|YP_002974214.1| hypothetical protein Rleg_0364 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857008|gb|ACS54675.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 209
Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
MS A+ L+DF S S I+ + S++ ++ D + E+ +AY EG+ A
Sbjct: 1 MSIALSRYLKDFGEPES-SAPILDMDDFGSDAFPEMASEPAIDVEAERREAYAEGHAAAT 59
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
+ ++ + + H E+ +L+ +E + IA +RD + + + +
Sbjct: 60 VELTEKYEREVRMLAEVHARELEELKLRYEVEAAAVIASRIRDIAEEIAQLVSAGAAVAI 119
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
V+ L+ KAA A+++ D + +G G +V+ GP L +++ LGE++ AV +
Sbjct: 120 APVMTEALAAKAAESLASLLRDAILEGAAGAVVVRGPTRLFDILKAELGEHAEAVRHIET 179
Query: 181 DTVEFSTKIFGSVIKTRLESWLSDVK 206
D ++ + +I +VI TR+ +W + +K
Sbjct: 180 DDIDLAVEIGDAVIVTRMSAWAASLK 205
>gi|86356324|ref|YP_468216.1| hypothetical protein RHE_CH00673 [Rhizobium etli CFN 42]
gi|86280426|gb|ABC89489.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 209
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 32/180 (17%)
Query: 43 DFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
D + E+ +AY +G+ A D ++ + + +H + +L+ +E + IA VR
Sbjct: 42 DVEAERREAYAQGHAAATADLTEKYEGEARALAEAHARALEELKIRYEVEAAAVIASRVR 101
Query: 103 DSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDF----------------LKK 146
D + EV +++ S AAI A VV D + +
Sbjct: 102 D--------IAEEVAQLV--------SAGAAIAIAPVVTDALAAKAAESLAALLREAILE 145
Query: 147 GDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVK 206
G G IV+ GP L +++ LGE+++AV + AD V+ + +I SVI TR+ +W++ +K
Sbjct: 146 GAAGPIVVRGPTGLFDILKAELGEHAAAVRHIEADDVDLAVEIGESVIVTRMSAWVASLK 205
>gi|218675468|ref|ZP_03525137.1| hypothetical protein RetlG_30921 [Rhizobium etli GR56]
Length = 209
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 87/164 (53%)
Query: 43 DFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
D + E+ AY +G+ A D ++S+ + H E+ +L+ +E + IA VR
Sbjct: 42 DVEAERRDAYAQGHAAATADLTEKYESEARDLAEVHARELEELKLRYEVEAAAVIASRVR 101
Query: 103 DSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHS 162
D + + + + V+ L+ KAA + AA++ D + +G G IV+ GP L
Sbjct: 102 DIAEEVAQLVSAGAATAIAPVMTEALAAKAARDLAALLRDAILEGAAGPIVVRGPTRLFD 161
Query: 163 LIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVK 206
+++ LGE+++AV + AD ++ + +I SVI TR+ +W + +K
Sbjct: 162 ILKAELGEHAAAVRHLEADDIDLAVEIGESVIVTRMSAWAASLK 205
>gi|15887913|ref|NP_353594.1| hypothetical protein Atu0568 [Agrobacterium tumefaciens str. C58]
gi|15155507|gb|AAK86379.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 218
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 10/215 (4%)
Query: 1 MSDAVLSRLEDFSRL----GSLSDKIVLSETIISNSTADVTFS----SIADFQKEQDKAY 52
MS ++ L+DF + D + ++T ++ AD+T + D + E+ AY
Sbjct: 1 MSASIARFLKDFGEAQPASPAFGDGLADADTDFASGFADITSGFDDLTPVDAEGEKQAAY 60
Query: 53 QEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSL 112
GY A + +++ + + +H E+ +LR ++ T+ ++ +R+ + +L
Sbjct: 61 ARGYEDATREITEKMQAEREELLAAHAAELEELRSVYLEETAVFLSRRLREGIDAIAANL 120
Query: 113 ECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLG-EY 171
+ IL +L LS KA A VV + G+ +V+ GPKNL ++ G E
Sbjct: 121 SEQTANILAPLLTEKLSLKAVSSLADVVRASMPDGEAVTLVVKGPKNLFEQLKTQPGFEE 180
Query: 172 SSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVK 206
+ E AD ++ S ++ SV TR+ +W S ++
Sbjct: 181 ETMKFTETAD-IDLSIELGESVFVTRMSAWASSLR 214
>gi|190890376|ref|YP_001976918.1| hypothetical protein RHECIAT_CH0000751 [Rhizobium etli CIAT 652]
gi|190695655|gb|ACE89740.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 209
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 86/164 (52%)
Query: 43 DFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
D + E+ AY +G+ A + ++S+ + H E+ +L+ +E + IA VR
Sbjct: 42 DVEAERRDAYAQGHAAATAELTEKYESEARALAEIHARELEELKLRYEVEAAAVIASRVR 101
Query: 103 DSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHS 162
D + + + + V+ L+ KAA AA++ D + +G G IV+ GP L
Sbjct: 102 DIAEELAQLVSAGAAAAIAPVMTEALAAKAAENLAALLRDAILEGAAGPIVVRGPTRLFD 161
Query: 163 LIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVK 206
+++ LGE+++AV + +D ++ + +I SVI TR+ +W + +K
Sbjct: 162 ILKAELGEHATAVRHLESDDIDLAVEIGDSVIVTRMSAWAASLK 205
>gi|218516718|ref|ZP_03513558.1| hypothetical protein Retl8_25408 [Rhizobium etli 8C-3]
Length = 201
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 86/164 (52%)
Query: 43 DFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
D + E+ AY +G+ A + ++S+ + H E+ +L+ +E + IA VR
Sbjct: 34 DVEAERRDAYAQGHAAATAELTEKYESEARALAEIHARELEELKLRYEVEAAAVIASRVR 93
Query: 103 DSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHS 162
D + + + + V+ L+ KAA AA++ D + +G G IV+ GP L
Sbjct: 94 DIAEELAQLVSAGAAAAIAPVMTEALAAKAAENLAALLRDAILEGAAGPIVVRGPTRLFD 153
Query: 163 LIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVK 206
+++ LGE+++AV + +D ++ + +I SVI TR+ +W + +K
Sbjct: 154 ILKAELGEHATAVRHLESDDIDLAVEIGDSVIVTRMSAWAASLK 197
>gi|218460722|ref|ZP_03500813.1| hypothetical protein RetlK5_14991 [Rhizobium etli Kim 5]
Length = 209
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%)
Query: 34 ADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESST 93
A+ D + E+ AY +G+ A D ++S + H E+ +L+ +E
Sbjct: 33 AETPSEPPVDVEAERRDAYAQGHAAATADLTEKYESDARALAEVHARELEELKLRYEVEA 92
Query: 94 SKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIV 153
+ IA VRD + + + + V+ L+ KAA AA++ D + +G G IV
Sbjct: 93 AAVIASRVRDIAEEVAQLVSAGAAAAIAPVMTEALAAKAAENLAALLRDAILEGAAGPIV 152
Query: 154 IHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVK 206
+ GP L +++ LGE++ AV + +D ++ + +I SVI TR+ +W + +K
Sbjct: 153 VRGPTRLFDILKAELGEHARAVRHLESDDIDLAVEIDDSVIVTRMSAWAASLK 205
>gi|116250494|ref|YP_766332.1| hypothetical protein RL0722 [Rhizobium leguminosarum bv. viciae
3841]
gi|115255142|emb|CAK06216.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 209
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 85/164 (51%)
Query: 43 DFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
D + E+ +AY EG+ A + ++ + + H E+ +L+ +E + IA +R
Sbjct: 42 DVEAERREAYAEGHAAATVELTEKYEREARTLAEVHARELDELKLRYEVEAAAVIASRIR 101
Query: 103 DSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHS 162
D + + + +++ V+ L+ KAA AA++ D + +G G IV+ G L
Sbjct: 102 DIAEEVAQLVSAGAAQVIAPVMTEALAAKAAESLAALLRDAILEGAAGAIVVRGSTRLFD 161
Query: 163 LIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVK 206
+++ LGE++ AV + D ++ + +I SVI TR+ +W + +K
Sbjct: 162 ILKAELGEHAGAVRHLETDDIDLAVEIGDSVIVTRMSAWAASLK 205
>gi|325291955|ref|YP_004277819.1| hypothetical protein AGROH133_03971 [Agrobacterium sp. H13-3]
gi|27763655|gb|AAO20253.1| Orf38 [Agrobacterium sp. H13-3]
gi|325059808|gb|ADY63499.1| hypothetical protein AGROH133_03971 [Agrobacterium sp. H13-3]
Length = 216
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 43 DFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
D + E+ AY G+ A + +++ + + +H E+ LR ++ + +++ +R
Sbjct: 49 DVESEKQAAYARGHEDATREITEKMQAEREELLAAHAAELEGLRSVYLEEIAVFLSLRLR 108
Query: 103 DSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHS 162
+ + +L + IL VL LS KA A VV + G+ +V+ GPK+L
Sbjct: 109 EGIDAIATNLSEQTANILAPVLTEELSLKAVSALADVVRASMPDGEAVTLVVKGPKDLFE 168
Query: 163 LIEECLG-EYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVK 206
++ G E + E AD ++ S ++ SV TR+ +W S ++
Sbjct: 169 QLKTQPGFEEETMKFIETAD-IDLSVELGESVFVTRMSAWASSLR 212
>gi|15964426|ref|NP_384779.1| hypothetical protein SMc03041 [Sinorhizobium meliloti 1021]
gi|307311568|ref|ZP_07591209.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|15073603|emb|CAC45245.1| Conserved hypothetical protein, required for flagellum formation
[Sinorhizobium meliloti 1021]
gi|306899585|gb|EFN30214.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 215
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 43 DFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
D E+ +A+ +G +A + L + + ++ H E L++ E + IA+
Sbjct: 49 DIDAERREAFAQGRAEASAELALEHQKEIADLKARHAEETEALKQRLEEQAAGRIAVGFG 108
Query: 103 DSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHS 162
+ + +L + R+L V+D L+++A A +V L G+ I + GP L
Sbjct: 109 EMADRLALALGDQAARVLAPVMDEALAKRAVENLAGMVRHGLAAGEGIAITVRGPLALFE 168
Query: 163 LIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
++ L E ++ E+ D V+ + ++ +++ TR+ +W SD K+++
Sbjct: 169 ALKALLPETAAFRHVESGD-VDLTVEMGEAILVTRMAAW-SDTVRKVLA 215
>gi|12057223|gb|AAB81407.2| unknown [Sinorhizobium meliloti]
Length = 215
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 43 DFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
D E+ +A+ +G +A + L + + ++ H EI L++ E + IA
Sbjct: 49 DIDAERREAFAQGRAEASAELALEHQKEIADLKARHAEEIDALKQRLEEQAAARIAAGFG 108
Query: 103 DSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHS 162
+ + +L + R+L V+D L+++A A +V L G+ I + GP L
Sbjct: 109 EMADRLALALGDQAARVLAPVMDEALAKRAVENLAGMVRHGLAAGEGIAITVRGPLALFE 168
Query: 163 LIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
++ L E ++ E+ D V+ + ++ +++ TR+ +W SD K+++
Sbjct: 169 ALKALLPETAAFRHVESGD-VDLTVEMGEAILVTRMAAW-SDTVRKVLA 215
>gi|307318923|ref|ZP_07598354.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|306895337|gb|EFN26092.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
Length = 215
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 43 DFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
D E+ +A+ +G +A + L + + ++ H EI L++ E + IA
Sbjct: 49 DIDAERREAFAQGRAEASAELALEHQKEIADLKARHAEEIDALKQRLEEQAAARIAAGFG 108
Query: 103 DSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHS 162
+ + +L + R+L V+D L+++A A +V L G+ I + GP L
Sbjct: 109 EMADRLALALGDQAARVLAPVMDEALTKRAVENLAGMVRHGLAAGEGIAITVRGPLALFE 168
Query: 163 LIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
++ L E ++ E+ D V+ + ++ +++ TR+ +W SD K+++
Sbjct: 169 ALKALLPETAAFRHVESGD-VDLTVEMGEAILVTRMAAW-SDTVRKVLA 215
>gi|222147583|ref|YP_002548540.1| GTPase protein [Agrobacterium vitis S4]
gi|221734571|gb|ACM35534.1| GTPase protein [Agrobacterium vitis S4]
Length = 216
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 77/164 (46%)
Query: 43 DFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
D +KE+ AY EG+ A+ + ++++H + +L E ++ ++ IA ++
Sbjct: 49 DVEKERQDAYAEGHEAAVKAADERHAEALSILEKAHAEALQELTEKHQAELARVIAEGLQ 108
Query: 103 DSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHS 162
S + + + L +L L KA + ++++ + +G G+I + GP L
Sbjct: 109 QIASDLSRIVGSQTVETLAPLLSDLLVDKALEDISSLLKAAVLEGAAGQITVTGPAALFK 168
Query: 163 LIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVK 206
+ E + + + AD ++ + + G+ + TR+ +W + +K
Sbjct: 169 QLAELMEGKDLLLKHVEADDLDLTVDVGGAALVTRISAWTASLK 212
>gi|150395497|ref|YP_001325964.1| hypothetical protein Smed_0270 [Sinorhizobium medicae WSM419]
gi|150027012|gb|ABR59129.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 215
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 43 DFQKEQDKAYQEGYNKAIHDREL-YWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAV 101
D E+ +AY +G +A + L + K D R + +A R L E + K A
Sbjct: 49 DIDAERREAYAQGRAEARAEISLEHQKEIADLKARHSEEMVALTRRLEEQAAGKIAA--- 105
Query: 102 RDSFKCFSDSLEC----EVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGP 157
F +D L + R+L V+D L+++A A +V L G+ + + GP
Sbjct: 106 --GFGEMADRLALLLGDQTARVLAPVMDDALAKRAVDNLAGMVRHGLSAGEGITVTVRGP 163
Query: 158 KNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
L ++ L E ++A Y + V+ + ++ +++ TR+ +W SD K+++
Sbjct: 164 LALFETLKALLPE-TTAFHYVESGDVDLTVEVGEAILVTRMAAW-SDTVRKVLA 215
>gi|110632646|ref|YP_672854.1| hypothetical protein Meso_0285 [Mesorhizobium sp. BNC1]
gi|110283630|gb|ABG61689.1| hypothetical protein Meso_0285 [Chelativorans sp. BNC1]
Length = 207
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 93 TSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKI 152
T++A+A+ +S + + RIL + L L ++A E V+ + ++ +I
Sbjct: 90 TAEAMAVRFSESEREIEAKIAAVTARILSAALTENLCKRAIDELVGVIGEAMRDRQALRI 149
Query: 153 VIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESW---LSDV 205
+ GP+ L +++ E LGE ++ + + A ++ + +I S+ +TR+ W LS+V
Sbjct: 150 RVRGPEVLEAVLREKLGERAAQMDFSEAPGIDLTAEIEDSLFETRIAEWAAALSEV 205
>gi|163758025|ref|ZP_02165113.1| hypothetical protein HPDFL43_00330 [Hoeflea phototrophica DFL-43]
gi|162284314|gb|EDQ34597.1| hypothetical protein HPDFL43_00330 [Hoeflea phototrophica DFL-43]
Length = 208
Score = 42.0 bits (97), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 75 QRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAI 134
QR H EIA LR E+ +++I A+ ++++ +V IL +LD +
Sbjct: 74 QR-HAAEIAALRAEMETLAAQSIPQAIATRSAGIAEAIAADVAEILVPLLDETVRSLLLE 132
Query: 135 EFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVI 194
A + L + GKI + GP+ L + + E LG + + + + + ++ + +
Sbjct: 133 RLANEIHSVLALDNSGKITVSGPEGLVTTLCEILGGDAERISVNHVEQFDIEVEVDRTTL 192
Query: 195 KTRLESWLSDVK 206
TRL W + +K
Sbjct: 193 ATRLSDWSNALK 204
>gi|328545496|ref|YP_004305605.1| hypothetical protein SL003B_3880 [polymorphum gilvum SL003B-26A1]
gi|326415237|gb|ADZ72300.1| hypothetical protein SL003B_3880 [Polymorphum gilvum SL003B-26A1]
Length = 213
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 116 VIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYS-SA 174
+ R L+ V++ + + F+A + D L + IV+ GP L + E LG +A
Sbjct: 115 IARCLEPVIEQAMVERTVDAFSATLSDLLSGSEAPTIVVSGPAALLQRLSEGLGAAGRAA 174
Query: 175 VCYENADTVEFSTKIFGSVIKTRLESWLSD 204
V + ++ VE + + ++T+L WLS+
Sbjct: 175 VRLDPSNDVELRCVLDDTTVETQLADWLSE 204
>gi|254502243|ref|ZP_05114394.1| hypothetical protein SADFL11_2281 [Labrenzia alexandrii DFL-11]
gi|222438314|gb|EEE44993.1| hypothetical protein SADFL11_2281 [Labrenzia alexandrii DFL-11]
Length = 213
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 23 VLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEI 82
++ + I+ + A+ S + E ++ EG + H E + + + H +++
Sbjct: 26 LMVDVIMPDHRAEPVLSDEELRRAEYERGLSEGDERTRHHYEALLQQERE----RHASDL 81
Query: 83 ADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ R FE S +A A+ + L V ++L L + FA +
Sbjct: 82 EEERIRFEMRESANVAAAIDGFLEITEKRLSYSVSKLLMPFLKQSTIDQLVKAFAKQLTQ 141
Query: 143 FLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWL 202
+ I + GP+ L + + + L + + ++AD VE +VI+TRL +WL
Sbjct: 142 LAEVPGGTSIRMRGPETLVAQVLQQLPDLKDHIQVQHADQVELEAFFDETVIETRLGAWL 201
Query: 203 SDVKA 207
+ A
Sbjct: 202 GQLDA 206
>gi|90418369|ref|ZP_01226281.1| hypothetical protein SI859A1_02508 [Aurantimonas manganoxydans
SI85-9A1]
gi|90338041|gb|EAS51692.1| hypothetical protein SI859A1_02508 [Aurantimonas manganoxydans
SI85-9A1]
Length = 321
Score = 40.0 bits (92), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 119 ILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSS-AVCY 177
+LK + R+ +E A V + G I + GP +L +E+ LG+ + VC
Sbjct: 229 VLKPIALDARRRQTVLELADAVHMLIGDGKALNIRVTGPADLLEALEQALGKRKAFIVCE 288
Query: 178 ENADTVEFSTKIFGSVIKTRLESW 201
+ D VE + +V++TRL W
Sbjct: 289 PDPDMVEVKIECDQTVVETRLMGW 312
>gi|182420536|ref|ZP_02643576.2| LD-carboxypeptidase family protein [Clostridium perfringens NCTC
8239]
gi|182380053|gb|EDT77532.1| LD-carboxypeptidase family protein [Clostridium perfringens NCTC
8239]
Length = 293
Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 17/97 (17%)
Query: 66 YWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLD 125
Y + KND++ S DL E+F++ KAI IA R + C IR+L LD
Sbjct: 46 YLRRKNDYLAASDKERAEDLMEMFKNKEVKAI-IAYRGGYGC---------IRML-PYLD 94
Query: 126 IGLSRKAAIEFAA-----VVVDFLKKGDCGKIVIHGP 157
+G+ +K V++++L + G I HGP
Sbjct: 95 MGVIKKNPKILCGYSDLTVLLNYLSQ-KTGLITFHGP 130
>gi|115523188|ref|YP_780099.1| hypothetical protein RPE_1167 [Rhodopseudomonas palustris BisA53]
gi|115517135|gb|ABJ05119.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 214
Score = 39.7 bits (91), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 10/171 (5%)
Query: 46 KEQDKAYQ----EGYNKAIHDRELYWK-SKNDFIQRSHDNEIADLRELFESSTSKAIAIA 100
+D AYQ EGY A+ + EL +KN F + ++ + R + ++ IA A
Sbjct: 49 PPEDDAYQRGMAEGYAAALAEYELKLNDAKNAF-----NTQLEEQRNDLLNDSAAGIANA 103
Query: 101 VRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNL 160
V + + RIL+ ++ + R+A F + G + I GP L
Sbjct: 104 VLEVGSQLEARIAGVTARILEPLISNAVQRQAVAGFIEKLSTVASDGRRPALRIKGPAEL 163
Query: 161 HSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
L++ LG S + + E S + V++T+++ W +K ++
Sbjct: 164 LDLVKSKLGARSITMEFRAEPVAEVSVAVDEIVLETQVKIWADRLKLAVLG 214
>gi|18311440|ref|NP_563374.1| hypothetical protein CPE2458 [Clostridium perfringens str. 13]
gi|18146124|dbj|BAB82164.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 302
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 17/97 (17%)
Query: 66 YWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLD 125
Y + KND++ S DL E+F++ KAI IA R + C IR+L LD
Sbjct: 55 YLRRKNDYLAASDKERAEDLMEMFKNKEVKAI-IAYRGGYGC---------IRML-PYLD 103
Query: 126 IGLSRKAAIEFAA-----VVVDFLKKGDCGKIVIHGP 157
+G+ +K V++++L + G I HGP
Sbjct: 104 MGVIKKNPKILCGYSDLTVLLNYLSQ-KTGLITFHGP 139
>gi|182626026|ref|ZP_02953789.1| LD-carboxypeptidase family protein [Clostridium perfringens D str.
JGS1721]
gi|177908733|gb|EDT71244.1| LD-carboxypeptidase family protein [Clostridium perfringens D str.
JGS1721]
Length = 293
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 17/97 (17%)
Query: 66 YWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLD 125
Y + KND++ S DL E+F++ KAI IA R + C IR+L LD
Sbjct: 46 YLRRKNDYLAASDKERAEDLMEMFKNKEVKAI-IAYRGGYGC---------IRML-PYLD 94
Query: 126 IGLSRKAAIEFAA-----VVVDFLKKGDCGKIVIHGP 157
+G+ +K V++++L + G I HGP
Sbjct: 95 MGVIKKNPKILCGYSDLTVLLNYLSQ-KTGLITFHGP 130
>gi|170764281|ref|ZP_02640372.2| LD-carboxypeptidase family protein [Clostridium perfringens CPE
str. F4969]
gi|170713806|gb|EDT25988.1| LD-carboxypeptidase family protein [Clostridium perfringens CPE
str. F4969]
Length = 293
Score = 39.3 bits (90), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 17/97 (17%)
Query: 66 YWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLD 125
Y + KND++ S DL E+F+ KAI +A R + C IR+L LD
Sbjct: 46 YLRKKNDYLAASDKERAKDLMEMFKDKEVKAI-VAYRGGYGC---------IRML-PYLD 94
Query: 126 IGLSRK-----AAIEFAAVVVDFLKKGDCGKIVIHGP 157
IG+ +K V++++L + G I HGP
Sbjct: 95 IGVIKKNPKIICGYSDLTVLLNYLSQ-KTGLITFHGP 130
>gi|168211220|ref|ZP_02636845.1| LD-carboxypeptidase family protein [Clostridium perfringens B str.
ATCC 3626]
gi|170710752|gb|EDT22934.1| LD-carboxypeptidase family protein [Clostridium perfringens B str.
ATCC 3626]
Length = 293
Score = 39.3 bits (90), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 17/97 (17%)
Query: 66 YWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLD 125
Y + KND++ S DL E+F+ KAI +A R + C IR+L LD
Sbjct: 46 YLRRKNDYLAASDKERAEDLMEMFKDKEVKAI-VAYRGGYGC---------IRML-PYLD 94
Query: 126 IGLSRKAAIEFAA-----VVVDFLKKGDCGKIVIHGP 157
IG+ +K V++++L + G I HGP
Sbjct: 95 IGVIKKNPKILCGYSDLTVLLNYLSQ-KTGLITFHGP 130
>gi|110799344|ref|YP_697146.1| LD-carboxypeptidase family protein [Clostridium perfringens ATCC
13124]
gi|110673991|gb|ABG82978.1| LD-carboxypeptidase family protein [Clostridium perfringens ATCC
13124]
Length = 293
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 17/97 (17%)
Query: 66 YWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLD 125
Y + KND++ S DL E+F+ KAI +A R + C IR+L LD
Sbjct: 46 YLRKKNDYLAASDKERAEDLMEMFKDKEVKAI-VAYRGGYGC---------IRML-PYLD 94
Query: 126 IGLSRKAAIEFAA-----VVVDFLKKGDCGKIVIHGP 157
+G+ +K V++++L + G I HGP
Sbjct: 95 MGVIKKNPKILCGYSDLTVLLNYLSQ-KTGLITFHGP 130
>gi|169344111|ref|ZP_02865094.1| LD-carboxypeptidase family protein [Clostridium perfringens C str.
JGS1495]
gi|169297722|gb|EDS79821.1| LD-carboxypeptidase family protein [Clostridium perfringens C str.
JGS1495]
Length = 293
Score = 38.1 bits (87), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 27/133 (20%)
Query: 30 SNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELF 89
S + DV +I+ F K D +EG Y + KND++ S DL E+F
Sbjct: 20 SGDSTDVINYNISSF-KNLDFKIKEGK---------YLRRKNDYLAASDKERAEDLMEMF 69
Query: 90 ESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAA-----VVVDFL 144
+ KAI +A R + C IR+L LD+G+ +K V++++L
Sbjct: 70 KDKEVKAI-VAYRGGYGC---------IRML-PYLDMGVIKKNPKILCGYSDLTVLLNYL 118
Query: 145 KKGDCGKIVIHGP 157
+ G I HGP
Sbjct: 119 SQ-KTGLITFHGP 130
>gi|170764132|ref|ZP_02632857.2| LD-carboxypeptidase family protein [Clostridium perfringens E str.
JGS1987]
gi|170661730|gb|EDT14413.1| LD-carboxypeptidase family protein [Clostridium perfringens E str.
JGS1987]
Length = 293
Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 17/97 (17%)
Query: 66 YWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLD 125
Y + KND++ S DL ++F+ KAI IA R + C IR+L LD
Sbjct: 46 YLRRKNDYLAASDKERAEDLMDMFKDKEVKAI-IAYRGGYGC---------IRML-PYLD 94
Query: 126 IGLSRKAAIEFAA-----VVVDFLKKGDCGKIVIHGP 157
+G+ +K V++++L + G I HGP
Sbjct: 95 MGVIKKNPKILCGYSDLTVLLNYLSQ-KTGLITFHGP 130
>gi|13472586|ref|NP_104153.1| hypothetical protein mlr2930 [Mesorhizobium loti MAFF303099]
gi|14023332|dbj|BAB49939.1| mlr2930 [Mesorhizobium loti MAFF303099]
Length = 114
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%)
Query: 109 SDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECL 168
+D + V RI+ V+ L +++ A V + + G+ +I + GP +L ++ L
Sbjct: 13 TDLVAATVARIIGGVVSDDLQKRSLEALAGAVREAVGDGEAVRIAVRGPLSLFETLKASL 72
Query: 169 GEYSSAVCYENADTVEFSTKIFGSVIKTRLESW 201
G ++ + + A + + I +V +TR+ W
Sbjct: 73 GPRAANLDFIEAPGFDLTVTIDEAVFETRIAEW 105
>gi|227820869|ref|YP_002824839.1| hypothetical protein NGR_c02880 [Sinorhizobium fredii NGR234]
gi|227339868|gb|ACP24086.1| hypothetical protein NGR_c02880 [Sinorhizobium fredii NGR234]
Length = 217
Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 13/175 (7%)
Query: 43 DFQKEQDKAYQEG------YNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKA 96
D E+ +A+ +G H REL ++ H E+ +R T+
Sbjct: 50 DVDAERREAFAQGRAEAAAELAFEHQRELAE------LKARHAEELDAVRHRLAEETASK 103
Query: 97 IAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHG 156
+A + + +L + R+L VL+ L ++A + A ++ + G+ I + G
Sbjct: 104 LAAGFDQITERLALALGDQTARVLAPVLEAALLKRAIEDLATMIRQGVGAGEGLTITVKG 163
Query: 157 PKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
L +++ L + + + AD ++ + ++ +V+ TR+ +W SD K+++
Sbjct: 164 SPVLFEALKQHLDDDTLLFRHVVADDIDLTVELGETVLVTRMAAW-SDTVRKVLA 217
>gi|110801607|ref|YP_699715.1| mccF-like protein [Clostridium perfringens SM101]
gi|110682108|gb|ABG85478.1| LD-carboxypeptidase family protein [Clostridium perfringens SM101]
Length = 293
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 66 YWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLD 125
Y + KND++ S DL E+F+ KAI +A R + C IR+L LD
Sbjct: 46 YLRKKNDYLAASDKERAEDLMEMFKDKEVKAI-VAYRGGYGC---------IRML-PYLD 94
Query: 126 IGLSRKAAIEFAA-----VVVDFLKKGDCGKIVIHGP 157
IG+ +K V++++ + G I HGP
Sbjct: 95 IGVIKKNPKILCGYSDLTVLLNYASQ-KTGLITFHGP 130
>gi|159473284|ref|XP_001694769.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276581|gb|EDP02353.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1739
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 32 STADVTFSSIADFQKEQDKAYQEGYNKA-------IHDRELYWKSKNDFIQRSHDNEIAD 84
S AD+ + +KE K Y+E + A D E W+ + + ++++HD +I
Sbjct: 1435 SDADLRLEHLEQARKEDKKRYEEALSSAREAAEARQRDMEEDWRREKEALRKAHDKQIES 1494
Query: 85 LRELFES 91
LRE +E+
Sbjct: 1495 LREQYET 1501
>gi|260466609|ref|ZP_05812797.1| hypothetical protein MesopDRAFT_5444 [Mesorhizobium opportunistum
WSM2075]
gi|259029615|gb|EEW30903.1| hypothetical protein MesopDRAFT_5444 [Mesorhizobium opportunistum
WSM2075]
Length = 208
Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 44/93 (47%)
Query: 109 SDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECL 168
+D + V RIL V+ + +++ A V + + + +I + GP +L ++ L
Sbjct: 107 TDLVAATVARILGGVVSDDVQKRSLEALAGAVREAVGDSEAVRIAVRGPLSLFETLKASL 166
Query: 169 GEYSSAVCYENADTVEFSTKIFGSVIKTRLESW 201
G ++ + + A + + I +V +TR+ W
Sbjct: 167 GPRTANLDFTEAPGFDLTVNIDEAVFETRMAEW 199
>gi|118474095|ref|YP_892385.1| methyl-accepting chemotaxis protein [Campylobacter fetus subsp.
fetus 82-40]
gi|118413321|gb|ABK81741.1| methyl-accepting chemotaxis protein [Campylobacter fetus subsp.
fetus 82-40]
Length = 553
Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 133 AIEFAAVVVDFLKKGDCGKIVIHGPKN-----LHSLIEECLGEYSSAVCYENADTVEFST 187
IE + +V+D LKKG K V P N L +L+ E + E+ S + A FS
Sbjct: 266 TIEESNLVIDSLKKGTLSKTVTTKPHNAQLKELTNLLNEMIKEWHSMISTMQATLTSFSN 325
Query: 188 KIF 190
K F
Sbjct: 326 KDF 328
>gi|169835587|ref|ZP_02868775.1| ribosomal protein L9 [candidate division TM7 single-cell isolate
TM7a]
Length = 150
Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 67 WKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR--DSFKCFSDSLECEVIRILKSVL 124
K++N+ IQ+ HD ++ + +EL E +K I + V+ ++ K F E+++ +K L
Sbjct: 49 LKARNEKIQKHHDRDVKNAKELKEVLATKEIVLKVKAGENNKVFGSISAKEIVQAVKDQL 108
Query: 125 DIGLSRK 131
+I + +K
Sbjct: 109 NIDIDKK 115
>gi|322779263|gb|EFZ09567.1| hypothetical protein SINV_11721 [Solenopsis invicta]
Length = 620
Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 11/117 (9%)
Query: 10 EDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAY------QEGYNKAIHDR 63
+D S L L K V E+I+S FS +Q D + +N + +
Sbjct: 32 DDRSSLVDLLSKYVAGESIVSYKITTNDFSQKYTWQSSVDLTWIFIVDDMNIFNSFVFKQ 91
Query: 64 ELYWKSKNDFIQRSHDNEIADLRELFES-----STSKAIAIAVRDSFKCFSDSLECE 115
WK+ N ++ LRE+F++ K + I++ D F+C S L E
Sbjct: 92 NHIWKAVNQYLVIITMPNTTSLREIFQTVWKTYGIYKMVIISIEDDFRCLSRYLPFE 148
>gi|253748462|gb|EET02570.1| Hypothetical protein GL50581_141 [Giardia intestinalis ATCC 50581]
Length = 1532
Score = 35.4 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 32/177 (18%)
Query: 17 SLSDKIVLSETIISNSTADVTFSSIADFQ---KEQDKAYQEGYNKAIHDRELYWKSKNDF 73
+L++KI +E ++ T IAD KEQ++ K HD L +
Sbjct: 382 ALTEKIKEAERTLAEMLEKNTDGQIADLMAKLKEQEER-NACLEKQCHDVRLEMEDAIKA 440
Query: 74 IQRSHDNEIADLRELFES-STSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKA 132
+QR HD E+ ++ + S S ++ AV D+ K F ++L+C V I + D R
Sbjct: 441 LQRQHDEELDNIYSEYNSNSVISDLSGAVEDAEKEFKNTLKC-VDLIFNRLFD---DRNG 496
Query: 133 AIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKI 189
A+ + DF P +YS + Y+ DT FST++
Sbjct: 497 ALTKMLITKDF------------NPI-----------DYSDSKKYQKMDTSHFSTEV 530
Searching..................................................done
Results from round 2
>gi|254780530|ref|YP_003064943.1| hypothetical protein CLIBASIA_02085 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040207|gb|ACT57003.1| hypothetical protein CLIBASIA_02085 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 216
Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI
Sbjct: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL
Sbjct: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA
Sbjct: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
Query: 181 DTVEFSTKIFGSVIKTRLESWLSDVKAKIVSQQVSK 216
DTVEFSTKIFGSVIKTRLESWLSDVKAKIVSQQVSK
Sbjct: 181 DTVEFSTKIFGSVIKTRLESWLSDVKAKIVSQQVSK 216
>gi|315122278|ref|YP_004062767.1| hypothetical protein CKC_02650 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495680|gb|ADR52279.1| hypothetical protein CKC_02650 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 209
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 140/217 (64%), Positives = 167/217 (76%), Gaps = 13/217 (5%)
Query: 3 DAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHD 62
DA+LSRLEDF R+ SLSD L D + D QKE+DKAYQEGY AI D
Sbjct: 2 DAILSRLEDFGRVNSLSDVAAL----------DDETNYAKDIQKERDKAYQEGYAAAICD 51
Query: 63 RELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKS 122
RELYW+SKN+ +Q+SHDNEIADLRELFES TS+AI+ A+RDS KC S+SLE EV+RIL+S
Sbjct: 52 RELYWRSKNECLQQSHDNEIADLRELFESCTSEAISKAIRDSVKCLSNSLEYEVMRILES 111
Query: 123 VLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADT 182
VL+IG+SRKAAIEF+ +++D LKKGDCG I I PKN HSLIEECLGEYSS VCYE+++
Sbjct: 112 VLEIGISRKAAIEFSEIIIDLLKKGDCGHIKIQAPKNFHSLIEECLGEYSSMVCYEDSEK 171
Query: 183 VEFSTKIFGSVIKTRLESWLSDVK---AKIVSQQVSK 216
VEFS+KI G VI TRLESW SDVK A+ S ++SK
Sbjct: 172 VEFSSKICGGVITTRLESWFSDVKKIEARRFSNELSK 208
>gi|209547940|ref|YP_002279857.1| hypothetical protein Rleg2_0332 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533696|gb|ACI53631.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 209
Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
MS + L+DF S I+ + + ++ + D + E+ AY +G+ A
Sbjct: 1 MSITLSRYLKDFGEPEP-SVPIIEMDDFGGDGFPEMPSEPVIDVEAERRDAYAQGHAAAT 59
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
D ++++ + H E+ +L+ +E + IA +RD + + + +
Sbjct: 60 ADLTEKYEAEAQTLAEVHARELEELKLRYEVEAAAVIASRIRDIAEEVAQLVSAGAAIAI 119
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
V+ L+ +AA A ++ D + +G G IV+ GP L L+ LGE++ AV +
Sbjct: 120 APVMTEALAARAAESLAVLLRDAILEGAAGAIVVRGPSRLFELLATELGEHAEAVRHVET 179
Query: 181 DTVEFSTKIFGSVIKTRLESWLSDVKA 207
D ++ + +I SVI TR+ +W + +K
Sbjct: 180 DDIDLAVEIGESVIVTRMSAWAASLKK 206
>gi|222084879|ref|YP_002543408.1| hypothetical protein Arad_0901 [Agrobacterium radiobacter K84]
gi|221722327|gb|ACM25483.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 210
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 4/208 (1%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTA--DVTFSSIADFQKEQDKAYQEGYNK 58
MS + L+DFS L L + I + A D D + E+ AY +G+
Sbjct: 1 MSPTLSRYLKDFS--AELPPSAALPDLIFDETPAFLDSPVEPPIDIEAERRDAYAQGHEA 58
Query: 59 AIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIR 118
A + L + + + +H E+ LR +E ++ IA + ++ E
Sbjct: 59 ATQELLLRQQQALEAMAEAHRGEMDTLRTRYEEQAAERIAADMTQIATILGQTVSIEAAA 118
Query: 119 ILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYE 178
+L ++ L+ KA + A +V + G G + + GP++L ++ L ++ + + +
Sbjct: 119 VLAPIMTEALTAKAVADLADLVAASILDGAVGPVTVSGPRHLFDILHARLDDHGALLRHV 178
Query: 179 NADTVEFSTKIFGSVIKTRLESWLSDVK 206
AD V+ S I SV+ TR+ +W + ++
Sbjct: 179 EADDVDLSVTIGESVLVTRMSAWAASLR 206
>gi|218675468|ref|ZP_03525137.1| hypothetical protein RetlG_30921 [Rhizobium etli GR56]
Length = 209
Score = 208 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
MS ++ L+DF S I+ + ++ + D + E+ AY +G+ A
Sbjct: 1 MSISLSRYLKDFGEPKP-SAPIIDIDDFPGDAFPETPGEPPVDVEAERRDAYAQGHAAAT 59
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
D ++S+ + H E+ +L+ +E + IA VRD + + + +
Sbjct: 60 ADLTEKYESEARDLAEVHARELEELKLRYEVEAAAVIASRVRDIAEEVAQLVSAGAATAI 119
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
V+ L+ KAA + AA++ D + +G G IV+ GP L +++ LGE+++AV + A
Sbjct: 120 APVMTEALAAKAARDLAALLRDAILEGAAGPIVVRGPTRLFDILKAELGEHAAAVRHLEA 179
Query: 181 DTVEFSTKIFGSVIKTRLESWLSDVKA 207
D ++ + +I SVI TR+ +W + +K
Sbjct: 180 DDIDLAVEIGESVIVTRMSAWAASLKK 206
>gi|241203118|ref|YP_002974214.1| hypothetical protein Rleg_0364 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857008|gb|ACS54675.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 209
Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
MS A+ L+DF S S I+ + S++ ++ D + E+ +AY EG+ A
Sbjct: 1 MSIALSRYLKDFGEPES-SAPILDMDDFGSDAFPEMASEPAIDVEAERREAYAEGHAAAT 59
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
+ ++ + + H E+ +L+ +E + IA +RD + + + +
Sbjct: 60 VELTEKYEREVRMLAEVHARELEELKLRYEVEAAAVIASRIRDIAEEIAQLVSAGAAVAI 119
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
V+ L+ KAA A+++ D + +G G +V+ GP L +++ LGE++ AV +
Sbjct: 120 APVMTEALAAKAAESLASLLRDAILEGAAGAVVVRGPTRLFDILKAELGEHAEAVRHIET 179
Query: 181 DTVEFSTKIFGSVIKTRLESWLSDVKA 207
D ++ + +I +VI TR+ +W + +K
Sbjct: 180 DDIDLAVEIGDAVIVTRMSAWAASLKK 206
>gi|116250494|ref|YP_766332.1| hypothetical protein RL0722 [Rhizobium leguminosarum bv. viciae
3841]
gi|115255142|emb|CAK06216.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 209
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
MS + L+DF S S I+ + ++ D + E+ +AY EG+ A
Sbjct: 1 MSITLSRYLKDFGEPES-SAPILDMNDFGGDDFPEMPSEPAIDVEAERREAYAEGHAAAT 59
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
+ ++ + + H E+ +L+ +E + IA +RD + + + +++
Sbjct: 60 VELTEKYEREARTLAEVHARELDELKLRYEVEAAAVIASRIRDIAEEVAQLVSAGAAQVI 119
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
V+ L+ KAA AA++ D + +G G IV+ G L +++ LGE++ AV +
Sbjct: 120 APVMTEALAAKAAESLAALLRDAILEGAAGAIVVRGSTRLFDILKAELGEHAGAVRHLET 179
Query: 181 DTVEFSTKIFGSVIKTRLESWLSDVKA 207
D ++ + +I SVI TR+ +W + +K
Sbjct: 180 DDIDLAVEIGDSVIVTRMSAWAASLKK 206
>gi|218460722|ref|ZP_03500813.1| hypothetical protein RetlK5_14991 [Rhizobium etli Kim 5]
Length = 209
Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
MS ++ L+DF S I+ + + A+ D + E+ AY +G+ A
Sbjct: 1 MSISLSRYLKDFGEPKP-SAPIIDIDDFPGDVFAETPSEPPVDVEAERRDAYAQGHAAAT 59
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
D ++S + H E+ +L+ +E + IA VRD + + + +
Sbjct: 60 ADLTEKYESDARALAEVHARELEELKLRYEVEAAAVIASRVRDIAEEVAQLVSAGAAAAI 119
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
V+ L+ KAA AA++ D + +G G IV+ GP L +++ LGE++ AV + +
Sbjct: 120 APVMTEALAAKAAENLAALLRDAILEGAAGPIVVRGPTRLFDILKAELGEHARAVRHLES 179
Query: 181 DTVEFSTKIFGSVIKTRLESWLSDVKA 207
D ++ + +I SVI TR+ +W + +K
Sbjct: 180 DDIDLAVEIDDSVIVTRMSAWAASLKK 206
>gi|190890376|ref|YP_001976918.1| hypothetical protein RHECIAT_CH0000751 [Rhizobium etli CIAT 652]
gi|190695655|gb|ACE89740.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 209
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 1/207 (0%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
MS ++ L+DF S I+ + ++ + D + E+ AY +G+ A
Sbjct: 1 MSISLSRYLKDFGEPKP-SAPIIDIDDFPGDAFPEAPSEPSVDVEAERRDAYAQGHAAAT 59
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
+ ++S+ + H E+ +L+ +E + IA VRD + + + +
Sbjct: 60 AELTEKYESEARALAEIHARELEELKLRYEVEAAAVIASRVRDIAEELAQLVSAGAAAAI 119
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
V+ L+ KAA AA++ D + +G G IV+ GP L +++ LGE+++AV + +
Sbjct: 120 APVMTEALAAKAAENLAALLRDAILEGAAGPIVVRGPTRLFDILKAELGEHATAVRHLES 179
Query: 181 DTVEFSTKIFGSVIKTRLESWLSDVKA 207
D ++ + +I SVI TR+ +W + +K
Sbjct: 180 DDIDLAVEIGDSVIVTRMSAWAASLKK 206
>gi|86356324|ref|YP_468216.1| hypothetical protein RHE_CH00673 [Rhizobium etli CFN 42]
gi|86280426|gb|ABC89489.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 209
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 52/207 (25%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
MS ++ L+DF S I+ + + + + D + E+ +AY +G+ A
Sbjct: 1 MSISLSRYLKDFGEPKP-SAPIIDIDDLAGDVFPETPSEPPVDVEAERREAYAQGHAAAT 59
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
D ++ + + +H + +L+ +E + IA VRD + + + +
Sbjct: 60 ADLTEKYEGEARALAEAHARALEELKIRYEVEAAAVIASRVRDIAEEVAQLVSAGAAIAI 119
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
V+ L+ KAA AA++ + + +G G IV+ GP L +++ LGE+++AV + A
Sbjct: 120 APVVTDALAAKAAESLAALLREAILEGAAGPIVVRGPTGLFDILKAELGEHAAAVRHIEA 179
Query: 181 DTVEFSTKIFGSVIKTRLESWLSDVKA 207
D V+ + +I SVI TR+ +W++ +K
Sbjct: 180 DDVDLAVEIGESVIVTRMSAWVASLKK 206
>gi|15887913|ref|NP_353594.1| hypothetical protein Atu0568 [Agrobacterium tumefaciens str. C58]
gi|15155507|gb|AAK86379.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 218
Score = 200 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 8/215 (3%)
Query: 1 MSDAVLSRLEDFSRL----GSLSDKIVLSETIISNSTADVTFS----SIADFQKEQDKAY 52
MS ++ L+DF + D + ++T ++ AD+T + D + E+ AY
Sbjct: 1 MSASIARFLKDFGEAQPASPAFGDGLADADTDFASGFADITSGFDDLTPVDAEGEKQAAY 60
Query: 53 QEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSL 112
GY A + +++ + + +H E+ +LR ++ T+ ++ +R+ + +L
Sbjct: 61 ARGYEDATREITEKMQAEREELLAAHAAELEELRSVYLEETAVFLSRRLREGIDAIAANL 120
Query: 113 ECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYS 172
+ IL +L LS KA A VV + G+ +V+ GPKNL ++ G
Sbjct: 121 SEQTANILAPLLTEKLSLKAVSSLADVVRASMPDGEAVTLVVKGPKNLFEQLKTQPGFEE 180
Query: 173 SAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKA 207
+ + ++ S ++ SV TR+ +W S ++
Sbjct: 181 ETMKFTETADIDLSIELGESVFVTRMSAWASSLRK 215
>gi|325291955|ref|YP_004277819.1| hypothetical protein AGROH133_03971 [Agrobacterium sp. H13-3]
gi|27763655|gb|AAO20253.1| Orf38 [Agrobacterium sp. H13-3]
gi|325059808|gb|ADY63499.1| hypothetical protein AGROH133_03971 [Agrobacterium sp. H13-3]
Length = 216
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 93/213 (43%), Gaps = 6/213 (2%)
Query: 1 MSDAVLSRLEDFS--RLGSLSDKIVLSETIISNSTADVTFSS----IADFQKEQDKAYQE 54
MS ++ L+DF + L+ L++ + D+ D + E+ AY
Sbjct: 1 MSASIARYLKDFGDVQPAGLTFGEPLADVDGISGFGDIASGFDEFEPLDVESEKQAAYAR 60
Query: 55 GYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLEC 114
G+ A + +++ + + +H E+ LR ++ + +++ +R+ + +L
Sbjct: 61 GHEDATREITEKMQAEREELLAAHAAELEGLRSVYLEEIAVFLSLRLREGIDAIATNLSE 120
Query: 115 EVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSA 174
+ IL VL LS KA A VV + G+ +V+ GPK+L ++ G
Sbjct: 121 QTANILAPVLTEELSLKAVSALADVVRASMPDGEAVTLVVKGPKDLFEQLKTQPGFEEET 180
Query: 175 VCYENADTVEFSTKIFGSVIKTRLESWLSDVKA 207
+ + ++ S ++ SV TR+ +W S ++
Sbjct: 181 MKFIETADIDLSVELGESVFVTRMSAWASSLRK 213
>gi|218516718|ref|ZP_03513558.1| hypothetical protein Retl8_25408 [Rhizobium etli 8C-3]
Length = 201
Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 97/199 (48%), Gaps = 1/199 (0%)
Query: 9 LEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWK 68
++DF S I+ + ++ + D + E+ AY +G+ A + ++
Sbjct: 1 MKDFGEPKP-SAPIIDIDDFPGDAFPEAPSEPSVDVEAERRDAYAQGHAAATAELTEKYE 59
Query: 69 SKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGL 128
S+ + H E+ +L+ +E + IA VRD + + + + V+ L
Sbjct: 60 SEARALAEIHARELEELKLRYEVEAAAVIASRVRDIAEELAQLVSAGAAAAIAPVMTEAL 119
Query: 129 SRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTK 188
+ KAA AA++ D + +G G IV+ GP L +++ LGE+++AV + +D ++ + +
Sbjct: 120 AAKAAENLAALLRDAILEGAAGPIVVRGPTRLFDILKAELGEHATAVRHLESDDIDLAVE 179
Query: 189 IFGSVIKTRLESWLSDVKA 207
I SVI TR+ +W + +K
Sbjct: 180 IGDSVIVTRMSAWAASLKK 198
>gi|150395497|ref|YP_001325964.1| hypothetical protein Smed_0270 [Sinorhizobium medicae WSM419]
gi|150027012|gb|ABR59129.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 215
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 91/217 (41%), Gaps = 8/217 (3%)
Query: 1 MSDAVLSRLEDFSRLG---SLSDKIVLSETI---ISNSTADVTFSSIADFQKEQDKAYQE 54
MS ++ L+DFS + + + T D E+ +AY +
Sbjct: 1 MSASISRYLKDFSPPKIEFKRIPQGYFPDLDAEHLEERTGARPAVPEVDIDAERREAYAQ 60
Query: 55 GYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLEC 114
G +A + L + + ++ H E+ L E + IA + + L
Sbjct: 61 GRAEARAEISLEHQKEIADLKARHSEEMVALTRRLEEQAAGKIAAGFGEMADRLALLLGD 120
Query: 115 EVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSA 174
+ R+L V+D L+++A A +V L G+ + + GP L ++ L E ++A
Sbjct: 121 QTARVLAPVMDDALAKRAVDNLAGMVRHGLSAGEGITVTVRGPLALFETLKALLPE-TTA 179
Query: 175 VCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
Y + V+ + ++ +++ TR+ +W SD K+++
Sbjct: 180 FHYVESGDVDLTVEVGEAILVTRMAAW-SDTVRKVLA 215
>gi|15964426|ref|NP_384779.1| hypothetical protein SMc03041 [Sinorhizobium meliloti 1021]
gi|307311568|ref|ZP_07591209.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|15073603|emb|CAC45245.1| Conserved hypothetical protein, required for flagellum formation
[Sinorhizobium meliloti 1021]
gi|306899585|gb|EFN30214.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 215
Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 94/217 (43%), Gaps = 8/217 (3%)
Query: 1 MSDAVLSRLEDFSRLG---SLSDKIVLSETII---SNSTADVTFSSIADFQKEQDKAYQE 54
MS ++ L+DFS +L + N D E+ +A+ +
Sbjct: 1 MSASLSRYLKDFSPPKIELTLMPPRYFPDLDTGLSENRAGARPAVPEIDIDAERREAFAQ 60
Query: 55 GYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLEC 114
G +A + L + + ++ H E L++ E + IA+ + + +L
Sbjct: 61 GRAEASAELALEHQKEIADLKARHAEETEALKQRLEEQAAGRIAVGFGEMADRLALALGD 120
Query: 115 EVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSA 174
+ R+L V+D L+++A A +V L G+ I + GP L ++ L E ++A
Sbjct: 121 QAARVLAPVMDEALAKRAVENLAGMVRHGLAAGEGIAITVRGPLALFEALKALLPE-TAA 179
Query: 175 VCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
+ + V+ + ++ +++ TR+ +W SD K+++
Sbjct: 180 FRHVESGDVDLTVEMGEAILVTRMAAW-SDTVRKVLA 215
>gi|12057223|gb|AAB81407.2| unknown [Sinorhizobium meliloti]
Length = 215
Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Query: 1 MSDAVLSRLEDFSRLG-----SLSDKIVLSETIISNSTADV-TFSSIADFQKEQDKAYQE 54
MS ++ L+DFS +T +S + A D E+ +A+ +
Sbjct: 1 MSASLSRYLKDFSPPKIELTRMPPRYFPDLDTGLSENRAGARPAMPEIDIDAERREAFAQ 60
Query: 55 GYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLEC 114
G +A + L + + ++ H EI L++ E + IA + + +L
Sbjct: 61 GRAEASAELALEHQKEIADLKARHAEEIDALKQRLEEQAAARIAAGFGEMADRLALALGD 120
Query: 115 EVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSA 174
+ R+L V+D L+++A A +V L G+ I + GP L ++ L E ++A
Sbjct: 121 QAARVLAPVMDEALAKRAVENLAGMVRHGLAAGEGIAITVRGPLALFEALKALLPE-TAA 179
Query: 175 VCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
+ + V+ + ++ +++ TR+ +W SD K+++
Sbjct: 180 FRHVESGDVDLTVEMGEAILVTRMAAW-SDTVRKVLA 215
>gi|307318923|ref|ZP_07598354.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|306895337|gb|EFN26092.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
Length = 215
Score = 171 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Query: 1 MSDAVLSRLEDFS----RLGSLSDK-IVLSETIISNSTADV-TFSSIADFQKEQDKAYQE 54
MS ++ L+DFS L + + +T +S + A D E+ +A+ +
Sbjct: 1 MSASLSRYLKDFSPPRIELARVPPRYFPDLDTGLSENRAGARPAMPEIDIDAERREAFAQ 60
Query: 55 GYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLEC 114
G +A + L + + ++ H EI L++ E + IA + + +L
Sbjct: 61 GRAEASAELALEHQKEIADLKARHAEEIDALKQRLEEQAAARIAAGFGEMADRLALALGD 120
Query: 115 EVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSA 174
+ R+L V+D L+++A A +V L G+ I + GP L ++ L E ++A
Sbjct: 121 QAARVLAPVMDEALTKRAVENLAGMVRHGLAAGEGIAITVRGPLALFEALKALLPE-TAA 179
Query: 175 VCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
+ + V+ + ++ +++ TR+ +W SD K+++
Sbjct: 180 FRHVESGDVDLTVEMGEAILVTRMAAW-SDTVRKVLA 215
>gi|222147583|ref|YP_002548540.1| GTPase protein [Agrobacterium vitis S4]
gi|221734571|gb|ACM35534.1| GTPase protein [Agrobacterium vitis S4]
Length = 216
Score = 168 bits (424), Expect = 6e-40, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 91/214 (42%), Gaps = 8/214 (3%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTA-------DVTFSSIADFQKEQDKAYQ 53
M+ + L+DFS + + ++ ++ D +KE+ AY
Sbjct: 1 MTMPLAHYLKDFS-APRPAPMAAEPVSFNDDALMFPDMPMLELPQPDPVDVEKERQDAYA 59
Query: 54 EGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLE 113
EG+ A+ + ++++H + +L E ++ ++ IA ++ S +
Sbjct: 60 EGHEAAVKAADERHAEALSILEKAHAEALQELTEKHQAELARVIAEGLQQIASDLSRIVG 119
Query: 114 CEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSS 173
+ + L +L L KA + ++++ + +G G+I + GP L + E +
Sbjct: 120 SQTVETLAPLLSDLLVDKALEDISSLLKAAVLEGAAGQITVTGPAALFKQLAELMEGKDL 179
Query: 174 AVCYENADTVEFSTKIFGSVIKTRLESWLSDVKA 207
+ + AD ++ + + G+ + TR+ +W + +K
Sbjct: 180 LLKHVEADDLDLTVDVGGAALVTRISAWTASLKK 213
>gi|227820869|ref|YP_002824839.1| hypothetical protein NGR_c02880 [Sinorhizobium fredii NGR234]
gi|227339868|gb|ACP24086.1| hypothetical protein NGR_c02880 [Sinorhizobium fredii NGR234]
Length = 217
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 95/218 (43%), Gaps = 8/218 (3%)
Query: 1 MSDAVLSRLEDFS-------RLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQ 53
MS ++ L+DFS R+ + ++ + +A D E+ +A+
Sbjct: 1 MSASLSRYLKDFSAPKIELTRMPPKYFPDLEADFPTEDRSAQRPTMPEIDVDAERREAFA 60
Query: 54 EGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLE 113
+G +A + + + ++ H E+ +R T+ +A + + +L
Sbjct: 61 QGRAEAAAELAFEHQRELAELKARHAEELDAVRHRLAEETASKLAAGFDQITERLALALG 120
Query: 114 CEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSS 173
+ R+L VL+ L ++A + A ++ + G+ I + G L +++ L + +
Sbjct: 121 DQTARVLAPVLEAALLKRAIEDLATMIRQGVGAGEGLTITVKGSPVLFEALKQHLDDDTL 180
Query: 174 AVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
+ AD ++ + ++ +V+ TR+ +W SD K+++
Sbjct: 181 LFRHVVADDIDLTVELGETVLVTRMAAW-SDTVRKVLA 217
>gi|110632646|ref|YP_672854.1| hypothetical protein Meso_0285 [Mesorhizobium sp. BNC1]
gi|110283630|gb|ABG61689.1| hypothetical protein Meso_0285 [Chelativorans sp. BNC1]
Length = 207
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 85/204 (41%), Gaps = 4/204 (1%)
Query: 2 SDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIH 61
+ A+ L DF S + + S+ D ++ + +
Sbjct: 3 AIALADLLPDFGVQTSAVRNPA-PAFAAEENPKKSSEESVEDLVAQR---VSQAEVEIAE 58
Query: 62 DRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILK 121
+++K ++ H E+ + T++A+A+ +S + + RIL
Sbjct: 59 RLAREYEAKLKAERQRHAVELETVVARLTHETAEAMAVRFSESEREIEAKIAAVTARILS 118
Query: 122 SVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENAD 181
+ L L ++A E V+ + ++ +I + GP+ L +++ E LGE ++ + + A
Sbjct: 119 AALTENLCKRAIDELVGVIGEAMRDRQALRIRVRGPEVLEAVLREKLGERAAQMDFSEAP 178
Query: 182 TVEFSTKIFGSVIKTRLESWLSDV 205
++ + +I S+ +TR+ W + +
Sbjct: 179 GIDLTAEIEDSLFETRIAEWAAAL 202
>gi|218661979|ref|ZP_03517909.1| hypothetical protein RetlI_22098 [Rhizobium etli IE4771]
Length = 89
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
MS ++ L+DF S I+ + + A+ D + E+ AY +G+ A
Sbjct: 1 MSISLSRYLKDFGEPKP-SAPIIDIDDFPGDVFAETPSEPPVDVEAERRDAYAQGHAAAT 59
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFE 90
D ++S + H E+ +L+ +E
Sbjct: 60 ADLTEKYESDARALAEVHARELEELKLRYE 89
>gi|260466609|ref|ZP_05812797.1| hypothetical protein MesopDRAFT_5444 [Mesorhizobium opportunistum
WSM2075]
gi|259029615|gb|EEW30903.1| hypothetical protein MesopDRAFT_5444 [Mesorhizobium opportunistum
WSM2075]
Length = 208
Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 76/205 (37%), Gaps = 5/205 (2%)
Query: 2 SDAVLSRLEDFS-RLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
S + L DF R +S + A +S AD +A +
Sbjct: 3 SATLFDLLPDFGTRAQRVSPPQATVD----PRRAPEPAASQADIGTLIAEAVAQAEATLT 58
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
++ + ++++ E E F A++ + +D + V RIL
Sbjct: 59 ERFSAAHEAALEAERQANAEEARIFLESFGGDVGNAVSSRIDAMEARVTDLVAATVARIL 118
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
V+ + +++ A V + + + +I + GP +L ++ LG ++ + + A
Sbjct: 119 GGVVSDDVQKRSLEALAGAVREAVGDSEAVRIAVRGPLSLFETLKASLGPRTANLDFTEA 178
Query: 181 DTVEFSTKIFGSVIKTRLESWLSDV 205
+ + I +V +TR+ W +
Sbjct: 179 PGFDLTVNIDEAVFETRMAEWSETL 203
>gi|163758025|ref|ZP_02165113.1| hypothetical protein HPDFL43_00330 [Hoeflea phototrophica DFL-43]
gi|162284314|gb|EDQ34597.1| hypothetical protein HPDFL43_00330 [Hoeflea phototrophica DFL-43]
Length = 208
Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 89/206 (43%), Gaps = 2/206 (0%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
M+ ++ L DF L ++ + + ++ S D + +A+ EG A
Sbjct: 1 MTASLARFLPDF-ELPAIRSLSGMPDDSLAGSPP-SPAEPAVDVDAVRAEAFAEGEAAAR 58
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
+ E + ++ + + H EIA LR E+ +++I A+ ++++ +V IL
Sbjct: 59 AELEAHHAAEREAEAQRHAAEIAALRAEMETLAAQSIPQAIATRSAGIAEAIAADVAEIL 118
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
+LD + A + L + GKI + GP+ L + + E LG + + +
Sbjct: 119 VPLLDETVRSLLLERLANEIHSVLALDNSGKITVSGPEGLVTTLCEILGGDAERISVNHV 178
Query: 181 DTVEFSTKIFGSVIKTRLESWLSDVK 206
+ + ++ + + TRL W + +K
Sbjct: 179 EQFDIEVEVDRTTLATRLSDWSNALK 204
>gi|13472586|ref|NP_104153.1| hypothetical protein mlr2930 [Mesorhizobium loti MAFF303099]
gi|14023332|dbj|BAB49939.1| mlr2930 [Mesorhizobium loti MAFF303099]
Length = 114
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 51/109 (46%)
Query: 97 IAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHG 156
+++ + +D + V RI+ V+ L +++ A V + + G+ +I + G
Sbjct: 1 MSLRIDAMETRVTDLVAATVARIIGGVVSDDLQKRSLEALAGAVREAVGDGEAVRIAVRG 60
Query: 157 PKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDV 205
P +L ++ LG ++ + + A + + I +V +TR+ W + +
Sbjct: 61 PLSLFETLKASLGPRAANLDFIEAPGFDLTVTIDEAVFETRIAEWSATL 109
>gi|319781671|ref|YP_004141147.1| hypothetical protein Mesci_1944 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167559|gb|ADV11097.1| hypothetical protein Mesci_1944 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 208
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 56/130 (43%)
Query: 76 RSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIE 135
++ E E KA+++ + + + V RI+ ++ L +++
Sbjct: 74 QASAEEARIFLESLGDDVGKAVSLHIDAMEARVTGLVAGTVARIIGGIVSDDLQKRSIDA 133
Query: 136 FAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIK 195
A V + + + +IV+ GP ++ ++ LG ++ + + A + + I +V +
Sbjct: 134 LADAVREAVGDAEAVRIVVRGPLSMFETLKASLGPRAANLDFVEAPGFDLTVAIDEAVFE 193
Query: 196 TRLESWLSDV 205
TR+ W + +
Sbjct: 194 TRMAEWSTTL 203
>gi|115523188|ref|YP_780099.1| hypothetical protein RPE_1167 [Rhodopseudomonas palustris BisA53]
gi|115517135|gb|ABJ05119.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 214
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 82/211 (38%), Gaps = 2/211 (0%)
Query: 2 SDAVLSRLEDFSRLG-SLSDKIVLSETIISNSTADVTFSS-IADFQKEQDKAYQEGYNKA 59
+D V L DF R S V+ +S A + +D AYQ G +
Sbjct: 3 ADKVARLLADFDRPDLSKGRGRVVPFDYALHSGAKASPKPLPVQEAPPEDDAYQRGMAEG 62
Query: 60 IHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRI 119
++ K + + + + ++ + R + ++ IA AV + + RI
Sbjct: 63 YAAALAEYELKLNDAKNAFNTQLEEQRNDLLNDSAAGIANAVLEVGSQLEARIAGVTARI 122
Query: 120 LKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYEN 179
L+ ++ + R+A F + G + I GP L L++ LG S + +
Sbjct: 123 LEPLISNAVQRQAVAGFIEKLSTVASDGRRPALRIKGPAELLDLVKSKLGARSITMEFRA 182
Query: 180 ADTVEFSTKIFGSVIKTRLESWLSDVKAKIV 210
E S + V++T+++ W +K ++
Sbjct: 183 EPVAEVSVAVDEIVLETQVKIWADRLKLAVL 213
>gi|254473404|ref|ZP_05086801.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211957520|gb|EEA92723.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 210
Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 61/158 (38%), Gaps = 4/158 (2%)
Query: 49 DKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCF 108
+ + EG A E K + ++ E+A F+ + + +A ++S
Sbjct: 52 ENGFSEGEEAAKSGAEERIKKMKEDLEV----ELAARETAFKEGEGEKLKLAFQESLVEI 107
Query: 109 SDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECL 168
D L V IL ++ +A V+ L + I + GP++L L +
Sbjct: 108 EDRLSKTVSEILVPFIEESARSRAVASLVQVLRRQLSETPDILINVSGPEHLFDLFNKKT 167
Query: 169 GEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVK 206
GE S+ + + + + K+ + T L W +++
Sbjct: 168 GELSNTIKFSENSSTDLEVKVSDMTLSTGLTEWCEELR 205
>gi|254502243|ref|ZP_05114394.1| hypothetical protein SADFL11_2281 [Labrenzia alexandrii DFL-11]
gi|222438314|gb|EEE44993.1| hypothetical protein SADFL11_2281 [Labrenzia alexandrii DFL-11]
Length = 213
Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 73/181 (40%)
Query: 34 ADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESST 93
D + ++ + Y+ G ++ ++++ + H +++ + R FE
Sbjct: 33 PDHRAEPVLSDEELRRAEYERGLSEGDERTRHHYEALLQQERERHASDLEEERIRFEMRE 92
Query: 94 SKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIV 153
S +A A+ + L V ++L L + FA + + I
Sbjct: 93 SANVAAAIDGFLEITEKRLSYSVSKLLMPFLKQSTIDQLVKAFAKQLTQLAEVPGGTSIR 152
Query: 154 IHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKIVSQQ 213
+ GP+ L + + + L + + ++AD VE +VI+TRL +WL + A + +
Sbjct: 153 MRGPETLVAQVLQQLPDLKDHIQVQHADQVELEAFFDETVIETRLGAWLGQLDALQLEET 212
Query: 214 V 214
V
Sbjct: 213 V 213
>gi|153011514|ref|YP_001372728.1| hypothetical protein Oant_4199 [Ochrobactrum anthropi ATCC 49188]
gi|151563402|gb|ABS16899.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 235
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 78/202 (38%), Gaps = 3/202 (1%)
Query: 9 LEDFSRLGSLSDKIVLS-ETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYW 67
L+D + D + + ++I ++E+ A++ G + + +
Sbjct: 35 LKDTPPPQAGGDGAKRPVSAEKAAAAEQAEVAAIIAIEEEKRLAFEAGREDGHREAQALY 94
Query: 68 KSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIG 127
++ + R H+ EI LR F + +A ++ ++ + ++ IL +L
Sbjct: 95 DAEKTRLLREHEAEIETLRAAFSREQALLLAGSLTEALTALERNFSGQIAEILMPLLAEK 154
Query: 128 LSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFST 187
+ R+A EFA + G+ +I GP L + + S + E S
Sbjct: 155 MEREAVAEFARRIAALALDGEAPEI--SGPARLIVPLRDHAALLPSGCRFSETGAEELSF 212
Query: 188 KIFGSVIKTRLESWLSDVKAKI 209
++TR+ L ++KA +
Sbjct: 213 SFGDRKLETRIAPLLEELKAAV 234
>gi|118589972|ref|ZP_01547376.1| hypothetical protein SIAM614_14945 [Stappia aggregata IAM 12614]
gi|118437469|gb|EAV44106.1| hypothetical protein SIAM614_14945 [Stappia aggregata IAM 12614]
Length = 212
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 78/207 (37%), Gaps = 1/207 (0%)
Query: 1 MSDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAI 60
M ++ S + S S + + + +++ Y+ G +
Sbjct: 1 MPTSIASHIPVLSASRFKSFAAFDPALVDVLEPCE-ETAPEPSLEEKLQAEYERGLAEGS 59
Query: 61 HDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
+ ++++ + + H + + R+ F+ + ++ ++ + + ++L
Sbjct: 60 NSTMAHFQALLEQEREEHAKRLNEERDRFDMREAANVSASIEGFLNVMEQRISYSLAKLL 119
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENA 180
+ L + + FA + ++ + I + G + L S + E L + ++A
Sbjct: 120 QPFLTEKIVDQLVEAFAGNLRQLTEETEGKMIRLRGSETLVSRVLEQLPTLRDRIDVQHA 179
Query: 181 DTVEFSTKIFGSVIKTRLESWLSDVKA 207
D VE + + I+TRL WL + A
Sbjct: 180 DQVELVALLDETTIETRLGQWLGQLDA 206
>gi|239834432|ref|ZP_04682760.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239822495|gb|EEQ94064.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 235
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Query: 45 QKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDS 104
++E+ A++ G + E ++++ + R H+ EI LR F + +A ++ ++
Sbjct: 72 EEERRAAFEAGREDGHREAEALYEAEKTRLLREHEAEIETLRAAFSREQALLLAGSLTEA 131
Query: 105 FKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLI 164
S ++ IL +L + R+A EFA + G+ +I GP L + +
Sbjct: 132 LAALERSFSGQIAEILMPLLAQKMEREAVAEFARRIAALALDGEAPEI--SGPARLVAPL 189
Query: 165 EECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKI 209
+ S + E S V++TR+ L ++KA +
Sbjct: 190 RDHAALLPSGCRFSETGADELSFSFGDRVLETRIAPLLEELKAAV 234
>gi|319898650|ref|YP_004158743.1| hypothetical protein BARCL_0478 [Bartonella clarridgeiae 73]
gi|319402614|emb|CBI76159.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 253
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 64/170 (37%), Gaps = 1/170 (0%)
Query: 37 TFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKA 96
+ + D + Q A+ + + + +K + ++ H I ++ S
Sbjct: 81 SSEGVVDVEAAQKAAFDQAMQETTEKLQKQFKVEKQRLEEEHAKAIEAAKQSVVESIGAN 140
Query: 97 IAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHG 156
+ + + E+ ++L + ++ +A +FA + D G +V+ G
Sbjct: 141 VQSQLTKGLADLRQEISQEIAQVLSIFIGEKITEEALQQFATKISDQAL-GGGQPLVLEG 199
Query: 157 PKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVK 206
K L +++ +S ++ + E VI T+L +L+ +K
Sbjct: 200 SKELFEQLKKQRDFDASQFKFQPTKSTEIRLHRGEMVIATQLTPFLTTLK 249
>gi|319405415|emb|CBI79034.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 253
Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 66/172 (38%), Gaps = 1/172 (0%)
Query: 35 DVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTS 94
D++ + D + + +A + + + ++ + ++ H I +++ F +
Sbjct: 79 DLSSEGVVDVEAVRKEAVDQAVQEVTEKLQKQFEVEKKCMEEEHAKAIEAVKQGFIETLG 138
Query: 95 KAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVI 154
+ + F + E+ +IL + ++ A EFA V+D + +V+
Sbjct: 139 ANVQHQLTKGFTDLRQEISQEIAQILSIFIGEKITEDALQEFATKVLDQALAVEK-PLVL 197
Query: 155 HGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVK 206
G + L +++ ++ + + E VI T+L L +K
Sbjct: 198 EGNEALFEQLKKQRDFDAAQFEFRPTKSTEIRLHRGEVVIATQLTPLLMALK 249
>gi|254720767|ref|ZP_05182578.1| hypothetical protein Bru83_14952 [Brucella sp. 83/13]
gi|265985825|ref|ZP_06098560.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306840142|ref|ZP_07472927.1| Hypothetical protein BROD_3015 [Brucella sp. NF 2653]
gi|264664417|gb|EEZ34678.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306404787|gb|EFM61081.1| Hypothetical protein BROD_3015 [Brucella sp. NF 2653]
Length = 226
Score = 71.4 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 80/185 (43%), Gaps = 2/185 (1%)
Query: 25 SETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIAD 84
+E + V +++ ++E+ A++ G + ++ ++++ + R H+ EI
Sbjct: 43 AEKPAAVGQEQVEMAAVIALEEEKRAAFEAGREDGHREAQVLYEAEKARLLREHEAEIET 102
Query: 85 LRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFL 144
LR F + +A ++ ++ SL ++ IL +L + +A EFA +
Sbjct: 103 LRAAFSREQALLLAGSLTEALSALEQSLSGQMAEILMPLLAAKMEHEAVAEFARRIAALA 162
Query: 145 KKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSD 204
+G+ +I GP L ++ S + + E S +++TR+ L +
Sbjct: 163 LEGEAPEI--SGPARLLEPLQAHGVLLPSGCRFSETASNELSFSFGEWMLETRIAPLLEE 220
Query: 205 VKAKI 209
+KA +
Sbjct: 221 LKAAV 225
>gi|306841270|ref|ZP_07473981.1| Hypothetical protein BIBO2_1054 [Brucella sp. BO2]
gi|306288672|gb|EFM60003.1| Hypothetical protein BIBO2_1054 [Brucella sp. BO2]
Length = 226
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 81/185 (43%), Gaps = 2/185 (1%)
Query: 25 SETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIAD 84
+E + V +++ ++E+ A++ G + + ++++ + R H+ EI
Sbjct: 43 AEKPAAVGQEQVEMAAVIALEEEKRAAFEAGREDGHREAQALYEAEKARLLREHEAEIET 102
Query: 85 LRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFL 144
LR F + +A ++ ++ SL ++ IL +L + ++A EFA +
Sbjct: 103 LRAAFSREQALLLAGSLTEALSALEQSLSGQMAEILMPLLAAKMEQEAVAEFARRIAALA 162
Query: 145 KKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSD 204
+G+ +I GP +L ++ S + + E S +++TR+ L +
Sbjct: 163 LEGEAPEI--SGPAHLLEPLQAHGVLLPSGCRFSETASNELSFSFGERMLETRIAPLLEE 220
Query: 205 VKAKI 209
+KA +
Sbjct: 221 LKAAV 225
>gi|17988497|ref|NP_541130.1| hypothetical protein BMEII0153 [Brucella melitensis bv. 1 str. 16M]
gi|23500859|ref|NP_700299.1| hypothetical protein BRA1145 [Brucella suis 1330]
gi|62317963|ref|YP_223816.1| hypothetical protein BruAb2_1082 [Brucella abortus bv. 1 str.
9-941]
gi|83269940|ref|YP_419231.1| hypothetical protein BAB2_1104 [Brucella melitensis biovar Abortus
2308]
gi|163845463|ref|YP_001623118.1| hypothetical protein BSUIS_B1372 [Brucella suis ATCC 23445]
gi|189023214|ref|YP_001932955.1| hypothetical protein BAbS19_II10290 [Brucella abortus S19]
gi|225628434|ref|ZP_03786468.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225686891|ref|YP_002734863.1| hypothetical protein BMEA_B1139 [Brucella melitensis ATCC 23457]
gi|237817510|ref|ZP_04596500.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254691604|ref|ZP_05154858.1| hypothetical protein Babob68_15995 [Brucella abortus bv. 6 str.
870]
gi|254695099|ref|ZP_05156927.1| hypothetical protein Babob3T_10683 [Brucella abortus bv. 3 str.
Tulya]
gi|254698195|ref|ZP_05160023.1| hypothetical protein Babob28_10920 [Brucella abortus bv. 2 str.
86/8/59]
gi|254699267|ref|ZP_05161095.1| hypothetical protein Bsuib55_00177 [Brucella suis bv. 5 str. 513]
gi|254706490|ref|ZP_05168318.1| hypothetical protein BpinM_05757 [Brucella pinnipedialis
M163/99/10]
gi|254711224|ref|ZP_05173035.1| hypothetical protein BpinB_13385 [Brucella pinnipedialis B2/94]
gi|254711825|ref|ZP_05173636.1| hypothetical protein BcetM6_00155 [Brucella ceti M644/93/1]
gi|254714894|ref|ZP_05176705.1| hypothetical protein BcetM_00160 [Brucella ceti M13/05/1]
gi|254731640|ref|ZP_05190218.1| hypothetical protein Babob42_10730 [Brucella abortus bv. 4 str.
292]
gi|256015904|ref|YP_003105913.1| hypothetical protein BMI_II1151 [Brucella microti CCM 4915]
gi|256030147|ref|ZP_05443761.1| hypothetical protein BpinM2_05775 [Brucella pinnipedialis
M292/94/1]
gi|256042872|ref|ZP_05445818.1| hypothetical protein Bmelb1R_00210 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256059798|ref|ZP_05449993.1| hypothetical protein Bneo5_05575 [Brucella neotomae 5K33]
gi|256112171|ref|ZP_05453092.1| hypothetical protein Bmelb3E_05697 [Brucella melitensis bv. 3 str.
Ether]
gi|256256792|ref|ZP_05462328.1| hypothetical protein Babob9C_05430 [Brucella abortus bv. 9 str.
C68]
gi|256261972|ref|ZP_05464504.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260166801|ref|ZP_05753612.1| hypothetical protein BruF5_00160 [Brucella sp. F5/99]
gi|260544148|ref|ZP_05819969.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260564109|ref|ZP_05834594.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260757236|ref|ZP_05869584.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759399|ref|ZP_05871747.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260762642|ref|ZP_05874974.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883040|ref|ZP_05894654.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261215450|ref|ZP_05929731.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261216583|ref|ZP_05930864.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261313944|ref|ZP_05953141.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261318816|ref|ZP_05958013.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261319453|ref|ZP_05958650.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261323778|ref|ZP_05962975.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261749709|ref|ZP_05993418.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261756179|ref|ZP_05999888.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265987177|ref|ZP_06099734.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265989307|ref|ZP_06101864.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993597|ref|ZP_06106154.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|297250145|ref|ZP_06933846.1| hypothetical protein BAYG_02932 [Brucella abortus bv. 5 str. B3196]
gi|17984288|gb|AAL53394.1| hypothetical protein BMEII0153 [Brucella melitensis bv. 1 str. 16M]
gi|23464524|gb|AAN34304.1| conserved hypothetical protein [Brucella suis 1330]
gi|62198156|gb|AAX76455.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82940214|emb|CAJ13270.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|163676186|gb|ABY40296.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189021788|gb|ACD74509.1| hypothetical protein BAbS19_II10290 [Brucella abortus S19]
gi|225616280|gb|EEH13328.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225642996|gb|ACO02909.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|237787265|gb|EEP61483.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|255998564|gb|ACU50251.1| hypothetical protein BMI_II1151 [Brucella microti CCM 4915]
gi|260097419|gb|EEW81293.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260151752|gb|EEW86845.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260669717|gb|EEX56657.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260673063|gb|EEX59884.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260677344|gb|EEX64165.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872568|gb|EEX79637.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260917057|gb|EEX83918.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260921672|gb|EEX88240.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292143|gb|EEX95639.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261298039|gb|EEY01536.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261299758|gb|EEY03255.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261302970|gb|EEY06467.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261736163|gb|EEY24159.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261739462|gb|EEY27388.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|262764467|gb|EEZ10499.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|262999976|gb|EEZ12666.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263091456|gb|EEZ15992.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|264659374|gb|EEZ29635.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|297174014|gb|EFH33378.1| hypothetical protein BAYG_02932 [Brucella abortus bv. 5 str. B3196]
gi|326411309|gb|ADZ68373.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326554598|gb|ADZ89237.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 226
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Query: 41 IADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIA 100
+ ++E+ A++ G + ++ ++++ + R H+ EI LR F + +A +
Sbjct: 59 VIALEEEKRAAFEAGREDGHREAQVLYEAEKARLLREHEAEIETLRATFSREQALLLAGS 118
Query: 101 VRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNL 160
+ ++ SL ++ IL +L + +A EFA + +G+ +I GP L
Sbjct: 119 LTEALSALEQSLSGQMAEILMPLLAAKMEHEAVAEFARRIAALALEGEAPEI--SGPARL 176
Query: 161 HSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKI 209
++ S + + E S +++TR+ L ++KA +
Sbjct: 177 LEALQAHGVLLPSGCRFSETASNELSFSFGERMLETRIAPLLEELKAAV 225
>gi|161621188|ref|YP_001595074.1| hypothetical protein BCAN_B1174 [Brucella canis ATCC 23365]
gi|254702391|ref|ZP_05164219.1| hypothetical protein Bsuib36_00165 [Brucella suis bv. 3 str. 686]
gi|260568708|ref|ZP_05839177.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261752952|ref|ZP_05996661.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|161337999|gb|ABX64303.1| Hypothetical protein BCAN_B1174 [Brucella canis ATCC 23365]
gi|260155373|gb|EEW90454.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261742705|gb|EEY30631.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 226
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Query: 41 IADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIA 100
+ ++E+ A++ G + ++ ++++ + R H+ EI LR F + +A +
Sbjct: 59 VIALEEEKRAAFEAGREDGHREAQVLYEAEKARLLREHEAEIETLRATFSREQALLLAGS 118
Query: 101 VRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNL 160
+ ++ SL ++ IL +L + +A EFA + +G+ +I GP L
Sbjct: 119 LTEALSALEQSLSGQMAEILMPLLAAKMEHEAVAEFARRIAAPALEGEAPEI--SGPARL 176
Query: 161 HSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKI 209
++ S + + E S +++TR+ L ++KA +
Sbjct: 177 LEALQAHGVLLPSGCRFSETASNELSFSFGERMLETRIAPLLEELKAAV 225
>gi|294852975|ref|ZP_06793647.1| hypothetical protein BAZG_01912 [Brucella sp. NVSL 07-0026]
gi|294818630|gb|EFG35630.1| hypothetical protein BAZG_01912 [Brucella sp. NVSL 07-0026]
Length = 226
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Query: 41 IADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIA 100
+ ++E+ A++ G + ++ ++++ + R H+ EI LR F + +A +
Sbjct: 59 VIALEEEKRAAFEAGREDGHREAQVLYEAEKARLLREHEAEIETLRATFSREQALLLAGS 118
Query: 101 VRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNL 160
+ ++ SL ++ IL +L + +A EFA + +G+ +I GP L
Sbjct: 119 LTEALSALEQSLSGQMAEILMPLLAAKMEHEAVAEFARRIAALALEGEAPEI--SGPAQL 176
Query: 161 HSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKI 209
++ S + + E S +++TR+ L ++KA +
Sbjct: 177 LEALQAHGVLLPSGCRFSETASNELSFSFGERMLETRIAPLLEELKAAV 225
>gi|296447982|ref|ZP_06889888.1| hypothetical protein MettrDRAFT_3604 [Methylosinus trichosporium
OB3b]
gi|296254492|gb|EFH01613.1| hypothetical protein MettrDRAFT_3604 [Methylosinus trichosporium
OB3b]
Length = 212
Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 77/209 (36%), Gaps = 8/209 (3%)
Query: 1 MSDAVLSRLEDFSRL---GSLSDKIVLSETIISNSTADVTFSSIADFQKE-QDKAYQEGY 56
M+ +V L F L+ + V+ + + + I + E +D+ +EG
Sbjct: 1 MARSVADFLRRFDEPRVVAPLAPEPVVIDEPLIEAEETEPREPIVELTDELRDQLVEEGR 60
Query: 57 NKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEV 116
A + E + + + R + + + R +F F + +V
Sbjct: 61 AAAKEECEELIARER----AASLLRLETERRSWAREEGERLGEQFRSAFDRFVEETGADV 116
Query: 117 IRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVC 176
R+L+ + + + + + + + + GP +L + E LG A
Sbjct: 117 GRVLEPFVTGEVRERMVEALVDRLRVMIADREHPVVRLCGPTDLLDSLCEKLGGEGVATR 176
Query: 177 YENADTVEFSTKIFGSVIKTRLESWLSDV 205
E+ V+ ++ + I+T LE W+ ++
Sbjct: 177 IEDVGGVDVRARLDATTIETSLEDWMREL 205
>gi|306845425|ref|ZP_07477999.1| Hypothetical protein BIBO1_2113 [Brucella sp. BO1]
gi|306274168|gb|EFM55984.1| Hypothetical protein BIBO1_2113 [Brucella sp. BO1]
Length = 228
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 76/185 (41%)
Query: 25 SETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIAD 84
+E + +++ ++E+ A++ G + + ++++ + R H+ EI
Sbjct: 43 AEKPAAVGQEQAEMAAVIALEEEKRAAFEAGREDGHREAQALYEAEKARLLREHEAEIET 102
Query: 85 LRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFL 144
LR F + +A ++ ++ SL ++ IL +L + +A EFA +
Sbjct: 103 LRATFSREQALLLAGSLTEALSALEQSLSGQMAEILMPLLAAKMEHEAVAEFARRIAALA 162
Query: 145 KKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSD 204
+ I GP +L ++ S + + E S +++TR+ L +
Sbjct: 163 LALEGEAPEISGPAHLLEPLQAHGVLLPSGCRFSETASNELSFSFGERMLETRIAPLLEE 222
Query: 205 VKAKI 209
+KA +
Sbjct: 223 LKAAV 227
>gi|240137206|ref|YP_002961675.1| hypothetical protein MexAM1_META1p0455 [Methylobacterium extorquens
AM1]
gi|240007172|gb|ACS38398.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 241
Score = 68.3 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 5/172 (2%)
Query: 34 ADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKS----KNDFIQRSHDNEIADLRELF 89
A T D + A G + + W + + Q + +A R +
Sbjct: 60 AAATLRPAEDREALIAAAEARGREQGRAEAMEEWSAQAALERAAQQALFEEGVAQARRDW 119
Query: 90 ESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDC 149
+ + +A + + +L V R++ VL L R+A E A + L +
Sbjct: 120 TEAQGEILAQGFVAAMQALDATLSDRVARLIAPVLGQALQRQALDELGAALKRILAEPQR 179
Query: 150 GKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESW 201
+ + GP +L + + LG S+ + +E A+ E + + +VI+T L +W
Sbjct: 180 AAVQVRGPDDLIAALAARLGG-STGIAFEAAEGPEVTVRAGETVIETELAAW 230
>gi|254559217|ref|YP_003066312.1| hypothetical protein METDI0609 [Methylobacterium extorquens DM4]
gi|254266495|emb|CAX22259.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 241
Score = 67.9 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 5/172 (2%)
Query: 34 ADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKS----KNDFIQRSHDNEIADLRELF 89
A T D + A G + + W + + Q + +A R +
Sbjct: 60 AAATLRPAEDREALIAAAEARGREQGRTEAMEEWSAQAALERAAQQALFEEGVAQARRDW 119
Query: 90 ESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDC 149
+ + +A + + +L V R++ VL L R+A E A + L +
Sbjct: 120 TEAQGEILAQGFVAAMQALDATLSDRVARLIAPVLGQALQRQALDELGAALKRILAEPQR 179
Query: 150 GKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESW 201
+ + GP +L + + LG S+ + +E A+ E + + +VI+T L +W
Sbjct: 180 AAVQVRGPDDLIAALAARLGG-STGIAFETAEGPEVTVRAGETVIETELAAW 230
>gi|148558081|ref|YP_001258008.1| hypothetical protein BOV_A1050 [Brucella ovis ATCC 25840]
gi|148369366|gb|ABQ62238.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 226
Score = 67.9 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Query: 41 IADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIA 100
+ ++E+ A++ G + ++ ++++ + R H+ EI LR F + +A +
Sbjct: 59 VIALEEEKRAAFEAGREDGHREAQVLYEAEKARLLREHEAEIETLRATFSREQALLLAGS 118
Query: 101 VRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNL 160
+ ++ SL ++ IL +L + +A EFA + +G+ +I GP L
Sbjct: 119 LTEALSALEQSLSGQMAEILMLLLAAKMEHEAVAEFARRIAALALEGEAPEI--SGPARL 176
Query: 161 HSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKI 209
++ S + + E S +++TR+ L ++KA +
Sbjct: 177 LEALQAHGVLLPSGCRFSETASNELSFSFGERMLETRIAPLLEELKAAV 225
>gi|163850072|ref|YP_001638115.1| hypothetical protein Mext_0630 [Methylobacterium extorquens PA1]
gi|163661677|gb|ABY29044.1| hypothetical protein Mext_0630 [Methylobacterium extorquens PA1]
Length = 242
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 5/172 (2%)
Query: 34 ADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKS----KNDFIQRSHDNEIADLRELF 89
A T D + A G + + W + + Q + +A R +
Sbjct: 61 AAATLRPAEDREALIAAAEARGREQGRAEAMEEWSAQAALERAAQQALFEEGVAQARRDW 120
Query: 90 ESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDC 149
+ + +A + + +L V R++ VL L R+A E A + L +
Sbjct: 121 TEAQGEILAQGFVAAMQALDATLSDRVARLIAPVLGQALQRQALDELGAALKRILAEPQR 180
Query: 150 GKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESW 201
+ + GP +L + + LG S+ + +E A+ E + + +VI+T L +W
Sbjct: 181 AAVQVRGPDDLIAALAARLGG-STGIAFEAAEGPEVTVRAGETVIETELAAW 231
>gi|188579877|ref|YP_001923322.1| hypothetical protein Mpop_0609 [Methylobacterium populi BJ001]
gi|179343375|gb|ACB78787.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 245
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 67/156 (42%)
Query: 54 EGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLE 113
+G +A + + + + Q D +A R + S + +A + + +L
Sbjct: 87 QGRAEAWAEAQAQAAQEREAQQAVFDEGLAQARRDWTQSQGENLAAGFTAAMQALDATLS 146
Query: 114 CEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSS 173
V R++ VL L R+A E A + L + + + GP +L + +E LG +S+
Sbjct: 147 DRVARLIAPVLGQALQRQALDELGAALRRILAEPQRPAVRVRGPADLIAAVEARLGAHSA 206
Query: 174 AVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKI 209
+ +E E S +VI+T L +W + A +
Sbjct: 207 GIAFEADAGPEVSVSAGETVIETELAAWSRLIAAAV 242
>gi|218528675|ref|YP_002419491.1| hypothetical protein Mchl_0641 [Methylobacterium chloromethanicum
CM4]
gi|218520978|gb|ACK81563.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 241
Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 67/172 (38%), Gaps = 5/172 (2%)
Query: 34 ADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKS----KNDFIQRSHDNEIADLRELF 89
A T D + A G + + W + + Q + +A R +
Sbjct: 60 AAATLRPAEDREALIAAAEARGREQGRAEAMEEWSAQAALERAAQQALFEEGVAQARRDW 119
Query: 90 ESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDC 149
+ + +A + + +L V R++ VL L R+A E A + L +
Sbjct: 120 TEAQGEILAQGFVAAMQALDATLSDRVARLIAPVLGQALQRQALDELGAALKRILAEPQR 179
Query: 150 GKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESW 201
+ + GP +L + + LG S+ + + A+ E + + +VI+T L +W
Sbjct: 180 AAVQVRGPDDLIAALAARLGG-STGIAFAAAEGPEVTVRAGETVIETELAAW 230
>gi|319406988|emb|CBI80625.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 245
Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 58/158 (36%), Gaps = 1/158 (0%)
Query: 37 TFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKA 96
+ D + + +A+ + + + ++++ ++ H I ++ S
Sbjct: 73 PSEGVVDVEVARKEAFDQAVQEVTEKLQKQFEAEKKCLEEEHAKAIEAAKQSMVESLGAN 132
Query: 97 IAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHG 156
+ + F + E+ ++L + ++ +A EFA ++D +V+ G
Sbjct: 133 VQSQLTKEFADLRQEISREIAQVLSIFIGEKITEEALQEFATKILDQALA-AGKPLVLEG 191
Query: 157 PKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVI 194
+ L +++ SS ++ + E VI
Sbjct: 192 NEKLFEQLKKQRDFDSSQFEFQPTKSTELRLHRGEMVI 229
>gi|27381974|ref|NP_773503.1| hypothetical protein bll6863 [Bradyrhizobium japonicum USDA 110]
gi|27355144|dbj|BAC52128.1| bll6863 [Bradyrhizobium japonicum USDA 110]
Length = 231
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 5/158 (3%)
Query: 49 DKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCF 108
D AY+ G+ + + + + + + R + + AI + +
Sbjct: 73 DDAYRRGHAAGVAEGDARVAEER----VRSAIRLGEERAKWSDQQAVAIVSGFEAACREI 128
Query: 109 SDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECL 168
++ V RIL L + KA + I GP L L++ L
Sbjct: 129 ETNIASSVARILLPFLADAVRDKAIGSLVEQIAALTGNSPVPVFKITGPSELLDLVKTQL 188
Query: 169 G-EYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDV 205
+ + YE A+T E +VI+T++ +W +
Sbjct: 189 ETARRTGIEYEAAETFEVRVVADQTVIETKIAAWSDRL 226
>gi|300024597|ref|YP_003757208.1| hypothetical protein Hden_3092 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526418|gb|ADJ24887.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 195
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 63/159 (39%), Gaps = 2/159 (1%)
Query: 49 DKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCF 108
+ YQ+G ++ + + + + + + R F + +A + + K
Sbjct: 37 EDGYQQGLSEGRAEAQADAEVRLAEAETLFLERLNLERNGFRQECADVLAARLDGAVKLI 96
Query: 109 SDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECL 168
++ V +L+ + L ++A E A + L +G I P + + L
Sbjct: 97 ERAVGERVATLLRPWIVEQLRKRAVQELEAAITRALVEGAKVHI--EAPAEMLEHLRSSL 154
Query: 169 GEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKA 207
+ + Y + + + I +VI+ + +W+S+++A
Sbjct: 155 PNDAFQIGYSESASSDVRAHIEDTVIEANIAAWISELEA 193
>gi|328545496|ref|YP_004305605.1| hypothetical protein SL003B_3880 [polymorphum gilvum SL003B-26A1]
gi|326415237|gb|ADZ72300.1| hypothetical protein SL003B_3880 [Polymorphum gilvum SL003B-26A1]
Length = 213
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 73/181 (40%), Gaps = 2/181 (1%)
Query: 26 ETIISNSTADVTFSSIADFQKEQDKA-YQEGYNKAIHDRELYWKSKNDFIQRSHDNEIAD 84
+ I+ + +E+ A Y G A+ + ++ +++ +
Sbjct: 24 DEIVLAEVVAMPDRPAEPSSEERLAAEYARGRADALAEARAEAEAILASERQALEAAAEA 83
Query: 85 LRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFL 144
R FE+ ++ + + L + R L+ V++ + + F+A + D L
Sbjct: 84 ERCRFEADFAERLGADLAACMAELERQLADAIARCLEPVIEQAMVERTVDAFSATLSDLL 143
Query: 145 KKGDCGKIVIHGPKNLHSLIEECLGEYS-SAVCYENADTVEFSTKIFGSVIKTRLESWLS 203
+ IV+ GP L + E LG +AV + ++ VE + + ++T+L WLS
Sbjct: 144 SGSEAPTIVVSGPAALLQRLSEGLGAAGRAAVRLDPSNDVELRCVLDDTTVETQLADWLS 203
Query: 204 D 204
+
Sbjct: 204 E 204
>gi|90422619|ref|YP_530989.1| hypothetical protein RPC_1106 [Rhodopseudomonas palustris BisB18]
gi|90104633|gb|ABD86670.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 210
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 2/210 (0%)
Query: 2 SDAVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIH 61
+D V L +F + + ++ + D AYQ G
Sbjct: 3 ADMVARLLANFDQPE--PARGRSRVVPFDHALHSAPKTPPRPAPPPVDDAYQRGVADGYA 60
Query: 62 DRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILK 121
++ K D + ++ D R + I + + + F + RIL+
Sbjct: 61 AAIAEYEQKLDAERSKFGAQLDDQRNALLDEVAGKITDEILELGRRFEVKIAGVTARILE 120
Query: 122 SVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENAD 181
++ + ++A F + + I P L L+ LG + +V
Sbjct: 121 PLIVGVVQKQAVASFVEKLSSVTSDNLRPALRITAPPELIELVRSKLGARAMSVELVAGA 180
Query: 182 TVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
E S V++T+++ W +K +++
Sbjct: 181 LPEVSIIADQVVLETQVKVWADRLKFAVLA 210
>gi|90418369|ref|ZP_01226281.1| hypothetical protein SI859A1_02508 [Aurantimonas manganoxydans
SI85-9A1]
gi|90338041|gb|EAS51692.1| hypothetical protein SI859A1_02508 [Aurantimonas manganoxydans
SI85-9A1]
Length = 321
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 67/193 (34%), Gaps = 1/193 (0%)
Query: 14 RLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDF 73
+ + A + + ++ Q+G +A + +
Sbjct: 124 DPDAAMNGFGDEAEAGLPDLAAAPSGELDPLEAAREAGIQQGRAEAEAEAAAALNEARET 183
Query: 74 IQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAA 133
+ + + R + + + + D + + +LK + R+
Sbjct: 184 AEAAKAAAVEAARGEWAGEEGEQMGALLTDRLDRIETIVRASLSSVLKPIALDARRRQTV 243
Query: 134 IEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSA-VCYENADTVEFSTKIFGS 192
+E A V + G I + GP +L +E+ LG+ + VC + D VE + +
Sbjct: 244 LELADAVHMLIGDGKALNIRVTGPADLLEALEQALGKRKAFIVCEPDPDMVEVKIECDQT 303
Query: 193 VIKTRLESWLSDV 205
V++TRL W + +
Sbjct: 304 VVETRLMGWRTAL 316
>gi|158422250|ref|YP_001523542.1| hypothetical protein AZC_0626 [Azorhizobium caulinodans ORS 571]
gi|158329139|dbj|BAF86624.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 238
Score = 61.8 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Query: 82 IADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVV 141
+ +R+ + T +A ++ + + L V RIL + G+ +A A V
Sbjct: 112 LQLVRQQWIIETGNTLAEGLKGAMAEMEERLATAVGRILVPFVQDGVRVQALERLTAEVS 171
Query: 142 DFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESW 201
L I + GP+++ ++ GE + + YE D V+ ++I+T+L +W
Sbjct: 172 RLLSTPGVPVIRVSGPQDMLDALKARCGE--AGMEYEVKDEVDVRVTADDTIIETQLRAW 229
Query: 202 LSDV 205
+ +
Sbjct: 230 SAHL 233
>gi|319403972|emb|CBI77560.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 245
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 57/158 (36%), Gaps = 1/158 (0%)
Query: 37 TFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKA 96
+ D + + +A+ + + + ++ + ++ H I ++ S
Sbjct: 73 PSEGVVDVEVARKEAFDQAVQEVTEKLQKQFEEEKKCLEEEHAKAIEAAKQSMVESLGAN 132
Query: 97 IAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHG 156
+ + F + E+ ++L + ++ +A EFA ++D +V+ G
Sbjct: 133 VQRQLTKEFSDLRQEISREIAQVLSVFIGEKITEEALQEFATKILDQALS-AGKPLVLEG 191
Query: 157 PKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVI 194
+ L +++ SS ++ + E VI
Sbjct: 192 NEKLFEQLKKQRDFDSSQFEFQPTKSTELRLHRGEMVI 229
>gi|312115288|ref|YP_004012884.1| hypothetical protein Rvan_2570 [Rhodomicrobium vannielii ATCC
17100]
gi|311220417|gb|ADP71785.1| hypothetical protein Rvan_2570 [Rhodomicrobium vannielii ATCC
17100]
Length = 216
Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 2/191 (1%)
Query: 15 LGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFI 74
+ ++S ++ L E + + + D + E AY++G + +
Sbjct: 1 MEAVSGRLALPEFLARLGNP-LPSECVDDRELEIAAAYRKGLEEGETEALAASNKILAES 59
Query: 75 QRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAI 134
H +EI R+ + + + V S + V RIL V+ L+ +A
Sbjct: 60 IARHRSEIEAARKAWVEGEADCLERLVLQSLAAIRGEICDAVARILSPVVGRHLTEQAIA 119
Query: 135 EFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVI 194
A + K+ I GP +L + L + + V ADT E + I +VI
Sbjct: 120 RLLAEIRKLTSDEGGIKLKISGPSDLVQELVSRLDD-AVIVETVIADTCEVAVSIDKTVI 178
Query: 195 KTRLESWLSDV 205
+ L WL +
Sbjct: 179 ELSLGRWLMSI 189
>gi|323139666|ref|ZP_08074708.1| hypothetical protein Met49242DRAFT_4096 [Methylocystis sp. ATCC
49242]
gi|322395098|gb|EFX97657.1| hypothetical protein Met49242DRAFT_4096 [Methylocystis sp. ATCC
49242]
Length = 221
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 60/154 (38%)
Query: 56 YNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECE 115
I + + ++ D + + + D RE + + A++ + + + L +
Sbjct: 64 REAIIAEFQARQEAALDAQRAEFEARLRDERERWATEQGAALSARLAQALDTAFEELRSD 123
Query: 116 VIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAV 175
V RI+ + ++ + + A + L + I GP++L IE L A+
Sbjct: 124 VARIISPFVAREVTGRVTEDLIAALRTGLANDGASAMEIRGPRDLLEKIESALASEPVAI 183
Query: 176 CYENADTVEFSTKIFGSVIKTRLESWLSDVKAKI 209
+D V+ + ++T L W++ + +
Sbjct: 184 SCHESDEVDARVTFASTTVETSLSDWMNLLLRER 217
>gi|217976234|ref|YP_002360381.1| hypothetical protein Msil_0036 [Methylocella silvestris BL2]
gi|217501610|gb|ACK49019.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 210
Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 65/161 (40%), Gaps = 5/161 (3%)
Query: 45 QKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDS 104
++ +++ Y G+ A + E ++ + + E RE + S A +
Sbjct: 50 EQGREEGYAAGFVDARREGEETLQALKLALAQQMGRE----REAWVKSEGAAFGGKIEAM 105
Query: 105 FKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLI 164
F + + V ++L+ +L + KA E + + D I I G + I
Sbjct: 106 LAHFEERVGASVAQVLRPLLAGPIRDKAVCELIDCIR-LMLGRDQPLIAISGRADFLGAI 164
Query: 165 EECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDV 205
+ LGE +++V + D + ++I++R+ SW +
Sbjct: 165 KLRLGEAAASVAFAANDECDIRIVADQTLIESRIRSWAEAL 205
>gi|170748098|ref|YP_001754358.1| hypothetical protein Mrad2831_1680 [Methylobacterium radiotolerans
JCM 2831]
gi|170654620|gb|ACB23675.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 211
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 64/167 (38%)
Query: 43 DFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
D A +EG + ++ + + +A+ R+ + + + +A +
Sbjct: 42 DLDAIAAAAREEGRREGEALAARAAQAALAAEREAAAAALAETRKSWVEAEAAVLASTLA 101
Query: 103 DSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHS 162
+ + L + R L+ L L ++A E A++ G + + GP +L
Sbjct: 102 EQIQASEARLAESLARALRPFLTEALRQEAVREVRALLTALAADERAGTVTVAGPADLTE 161
Query: 163 LIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKI 209
+ L + + ++ G++I+TRL++W + A +
Sbjct: 162 ALARHLDLPPGRLTIVGDGRPDLRIRMNGTLIETRLQAWGERLAALV 208
>gi|256158326|ref|ZP_05456230.1| hypothetical protein BcetM4_05707 [Brucella ceti M490/95/1]
gi|256252740|ref|ZP_05458276.1| hypothetical protein BcetB_00175 [Brucella ceti B1/94]
gi|261219819|ref|ZP_05934100.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265996840|ref|ZP_06109397.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260918403|gb|EEX85056.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262551137|gb|EEZ07298.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 216
Score = 57.9 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 52/112 (46%)
Query: 41 IADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIA 100
+ ++E+ A++ G + ++ ++++ + R H+ EI LR F + +A +
Sbjct: 59 VIALEEEKRAAFEAGREDGHREAQVLYEAEKARLLREHEAEIETLRATFSREQALLLAGS 118
Query: 101 VRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKI 152
+ ++ SL ++ IL +L + +A EFA + +G+ +I
Sbjct: 119 LTEALSALEQSLSGQMAEILMPLLAAKMEHEAVAEFARRIAALALEGEAPEI 170
>gi|182679603|ref|YP_001833749.1| hypothetical protein Bind_2688 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635486|gb|ACB96260.1| hypothetical protein Bind_2688 [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 210
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 79/201 (39%), Gaps = 2/201 (0%)
Query: 5 VLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRE 64
V L DF+ L ++ + + + D+ D + A +EG + +
Sbjct: 6 VSEFLRDFNALEIKNNSGGSAGVLEHDVNIDIERED--DLSAKLLAAREEGQAAGLTEGL 63
Query: 65 LYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVL 124
+++ ++ D + + L+ ++++ + +++ V +LK L
Sbjct: 64 KQGEARLAQERQEFDRRFGEAKTLWLEQIARSLKDEFLSAMNLVENNIVDSVEHVLKPFL 123
Query: 125 DIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVE 184
+ + A E ++ + + IV+ GPK++ ++ + L + + + E
Sbjct: 124 EHQIRHHALSELRRIIDSLYQDNNKQLIVMSGPKDILDVLTKDLPMPVQRIDTDPTNIDE 183
Query: 185 FSTKIFGSVIKTRLESWLSDV 205
+ ++T++ +W+S +
Sbjct: 184 VRITAGKTEVQTQIHAWISCL 204
>gi|114705808|ref|ZP_01438711.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
gi|114538654|gb|EAU41775.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
Length = 283
Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 78/195 (40%), Gaps = 12/195 (6%)
Query: 20 DKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQR--- 76
D L + + S + ++ + + AY EG ++A+ + E ++ +
Sbjct: 87 DARALQDDLRSKA---SRLNASKALEAARKAAYDEGRSEALAEAEADREAAIEAAVEEER 143
Query: 77 -----SHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRK 131
+ I R + + + +A A+ D S+++ + ILK + R+
Sbjct: 144 TAAEERQKSAIEAARAEWAEAEGERLAAALADQTARLSEAMRKTLSSILKPLAINTRQRQ 203
Query: 132 AAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADT-VEFSTKIF 190
+ E + G + GP +L +E LG+ ++ V + +D E +I
Sbjct: 204 SIDELVQSIGMLSFDGKAISVKASGPADLLDRLETALGDRAAHVTFHPSDDRSEVKIEIG 263
Query: 191 GSVIKTRLESWLSDV 205
+V+++RL W S +
Sbjct: 264 QTVLQSRLGEWRSAL 278
>gi|170741409|ref|YP_001770064.1| hypothetical protein M446_3224 [Methylobacterium sp. 4-46]
gi|168195683|gb|ACA17630.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 220
Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 76/217 (35%), Gaps = 8/217 (3%)
Query: 1 MSDAVLSRLEDFSRLGSLS----DKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGY 56
M+ L DFS S + VL + ++ D + +A + G
Sbjct: 1 MTAIFARYLPDFSAETSAAAEAEPLAVLLRSARRSAEPPPPPPPAEDREALLREAEERGR 60
Query: 57 ----NKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSL 112
+A + + Q D ++ + R + + +A A+ + L
Sbjct: 61 RLGRAQAAAETAAALDAALAESQAVADAQMRESRRAWAEEEGQVLAAALIRATGEIEARL 120
Query: 113 ECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYS 172
+ +L VL + +A E + L + + GP++L + LG +
Sbjct: 121 AARLAHLLLPVLGEAVRARAVAELRDAIARLLADAAKPAVRVSGPQDLLDALAAALGPQA 180
Query: 173 SAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKI 209
+ + A + + +VI+++L +W + A +
Sbjct: 181 QGIAFAPAQGADVTVTAEDAVIESQLAAWTGLLSAAV 217
>gi|23010954|ref|ZP_00051469.1| hypothetical protein Magn03005628 [Magnetospirillum magnetotacticum
MS-1]
Length = 106
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 46/100 (46%)
Query: 110 DSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLG 169
L V R++ VL L R+A AA + L + + + GP++L + + LG
Sbjct: 4 RDLSSRVARLIAPVLSESLQRQALDALAAALRKILAEPQRPAVRVCGPEDLIAAVSARLG 63
Query: 170 EYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKI 209
++ + +E A E + +VI+T L +W + A +
Sbjct: 64 GLAAGIAFEAAPGPEVTVSAGETVIETELAAWSGLIAAAV 103
>gi|159490970|ref|XP_001703446.1| hypothetical protein CHLREDRAFT_168953 [Chlamydomonas reinhardtii]
gi|158280370|gb|EDP06128.1| predicted protein [Chlamydomonas reinhardtii]
Length = 2366
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 53/167 (31%), Gaps = 31/167 (18%)
Query: 25 SETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIAD 84
S+ +N A +T S AD + + + + D +L + ++ H+ E+ +
Sbjct: 2230 SQAYGANGAAALTHSLDADLTATKRA-----HEEEVADLKLVHGQEVCELKHVHEEEVRE 2284
Query: 85 LRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFL 144
LR + E + + V + E EV +A E
Sbjct: 2285 LRRVHEEAIGEL--KRVHEVVGELKRVHEEEV--------------RALKELFD------ 2322
Query: 145 KKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFG 191
KG G + + K L +E + + V+ +
Sbjct: 2323 -KGAGGMVAANAKKRL---LEAEIEAKVEVEAMAKVEVVDLCSSDGD 2365
>gi|168278687|dbj|BAG11223.1| Rho/Rac guanine nucleotide exchange factor 2 [synthetic construct]
Length = 1080
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 832 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 890
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 891 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 950
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 951 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 995
>gi|58257735|dbj|BAA31626.3| KIAA0651 protein [Homo sapiens]
Length = 1114
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 866 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 924
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 925 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 984
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 985 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 1029
>gi|169618181|ref|XP_001802504.1| hypothetical protein SNOG_12279 [Phaeosphaeria nodorum SN15]
gi|160703569|gb|EAT80092.2| hypothetical protein SNOG_12279 [Phaeosphaeria nodorum SN15]
Length = 934
Score = 44.8 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/183 (10%), Positives = 69/183 (37%), Gaps = 14/183 (7%)
Query: 39 SSIADFQKEQ--DKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIA----DLRELFESS 92
S ++ + +A ++ + + + + ++ H +++ + R+ + +
Sbjct: 163 ESQITIERLRAEREATKKAHEEESARLTEDHEKEIADLKAKHASDLQSKAKEERKTEQEA 222
Query: 93 TSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKI 152
+IA ++ K + +L VL+ + A++ A +G
Sbjct: 223 AKLQSSIAAQEKAKVIRRN------GLLAVVLNAHHGYQDALQPTARWHHCPSQGLSKVF 276
Query: 153 VIHGPKNLHSLIEECLGEY-SSAVCYENADTVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
+ + + + G + + +E ++ +F+ + I R ++W+ ++ +
Sbjct: 277 SVQECVDGLTTLWAEQGALITRLLPHELSNDHDFALEFEAQTIV-RAQAWMQSLELRSAP 335
Query: 212 QQV 214
Q++
Sbjct: 336 QEL 338
>gi|297663256|ref|XP_002810090.1| PREDICTED: rho guanine nucleotide exchange factor 2-like isoform 1
[Pongo abelii]
Length = 1030
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 782 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 840
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 841 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 900
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 901 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 945
>gi|119573397|gb|EAW53012.1| rho/rac guanine nucleotide exchange factor (GEF) 2, isoform CRA_a
[Homo sapiens]
gi|119573402|gb|EAW53017.1| rho/rac guanine nucleotide exchange factor (GEF) 2, isoform CRA_a
[Homo sapiens]
Length = 1030
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 782 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 840
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 841 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 900
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 901 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 945
>gi|119573403|gb|EAW53018.1| rho/rac guanine nucleotide exchange factor (GEF) 2, isoform CRA_e
[Homo sapiens]
Length = 977
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 729 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 787
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 788 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 847
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 848 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 892
>gi|15011974|ref|NP_004714.2| rho guanine nucleotide exchange factor 2 isooform 3 [Homo sapiens]
gi|12224962|emb|CAC21656.1| hypothetical protein [Homo sapiens]
gi|55663549|emb|CAH72627.1| rho/rac guanine nucleotide exchange factor (GEF) 2 [Homo sapiens]
gi|117645434|emb|CAL38183.1| hypothetical protein [synthetic construct]
gi|119573398|gb|EAW53013.1| rho/rac guanine nucleotide exchange factor (GEF) 2, isoform CRA_b
[Homo sapiens]
gi|119573399|gb|EAW53014.1| rho/rac guanine nucleotide exchange factor (GEF) 2, isoform CRA_b
[Homo sapiens]
Length = 958
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 710 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 768
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 769 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 828
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 829 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 873
>gi|119573401|gb|EAW53016.1| rho/rac guanine nucleotide exchange factor (GEF) 2, isoform CRA_d
[Homo sapiens]
Length = 1008
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 760 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 818
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 819 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 878
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 879 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 923
>gi|18089027|gb|AAH20567.1| ARHGEF2 protein [Homo sapiens]
gi|30583653|gb|AAP36075.1| rho/rac guanine nucleotide exchange factor (GEF) 2 [Homo sapiens]
gi|61360742|gb|AAX41917.1| rho/rac guanine nucleotide exchange factor 2 [synthetic construct]
gi|123981172|gb|ABM82415.1| rho/rac guanine nucleotide exchange factor (GEF) 2 [synthetic
construct]
gi|123996005|gb|ABM85604.1| rho/rac guanine nucleotide exchange factor (GEF) 2 [synthetic
construct]
Length = 959
Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 711 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 769
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 770 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 829
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 830 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 874
>gi|297663260|ref|XP_002810092.1| PREDICTED: rho guanine nucleotide exchange factor 2-like isoform 3
[Pongo abelii]
Length = 958
Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 710 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 768
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 769 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 828
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 829 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 873
>gi|297280259|ref|XP_002801892.1| PREDICTED: rho guanine nucleotide exchange factor 2-like isoform 2
[Macaca mulatta]
Length = 958
Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 710 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 768
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 769 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 828
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 829 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 873
>gi|55663550|emb|CAH72628.1| rho/rac guanine nucleotide exchange factor (GEF) 2 [Homo sapiens]
Length = 987
Score = 44.0 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 739 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 797
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 798 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 857
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 858 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 902
>gi|253735778|ref|NP_001155856.1| rho guanine nucleotide exchange factor 2 isoform 2 [Homo sapiens]
gi|19744759|gb|AAL96658.1|AF486838_1 guanine nucleotide exchange factor GEF-H1 [Homo sapiens]
gi|55663552|emb|CAH72630.1| rho/rac guanine nucleotide exchange factor (GEF) 2 [Homo sapiens]
gi|119573400|gb|EAW53015.1| rho/rac guanine nucleotide exchange factor (GEF) 2, isoform CRA_c
[Homo sapiens]
Length = 985
Score = 43.6 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 737 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 795
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 796 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 855
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 856 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 900
>gi|297663258|ref|XP_002810091.1| PREDICTED: rho guanine nucleotide exchange factor 2-like isoform 2
[Pongo abelii]
Length = 985
Score = 43.6 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 737 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 795
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 796 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 855
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 856 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 900
>gi|253735775|ref|NP_001155855.1| rho guanine nucleotide exchange factor 2 isoform 1 [Homo sapiens]
gi|205830906|sp|Q92974|ARHG2_HUMAN RecName: Full=Rho guanine nucleotide exchange factor 2; AltName:
Full=Guanine nucleotide exchange factor H1;
Short=GEF-H1; AltName: Full=Microtubule-regulated
Rho-GEF; AltName: Full=Proliferating cell nucleolar
antigen p40
gi|55663551|emb|CAH72629.1| rho/rac guanine nucleotide exchange factor (GEF) 2 [Homo sapiens]
Length = 986
Score = 43.6 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 738 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 796
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 797 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 856
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 857 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 901
>gi|332810707|ref|XP_003308547.1| PREDICTED: rho guanine nucleotide exchange factor 2 isoform 2 [Pan
troglodytes]
Length = 958
Score = 43.6 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 710 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 768
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 769 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 828
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 829 RRQLAALGQTEPLPSEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 873
>gi|297280257|ref|XP_002801891.1| PREDICTED: rho guanine nucleotide exchange factor 2-like isoform 1
[Macaca mulatta]
Length = 985
Score = 43.6 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 737 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 795
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 796 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 855
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 856 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 900
>gi|332220692|ref|XP_003259488.1| PREDICTED: rho guanine nucleotide exchange factor 2 [Nomascus
leucogenys]
Length = 986
Score = 42.9 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 738 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPEWREKLCRANSRDGEA-GRAGAAPVV 796
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 797 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 856
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 857 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 901
>gi|332810705|ref|XP_003308546.1| PREDICTED: rho guanine nucleotide exchange factor 2 isoform 1 [Pan
troglodytes]
Length = 985
Score = 42.9 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 737 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 795
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 796 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 855
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 856 RRQLAALGQTEPLPSEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 900
>gi|330926682|ref|XP_003301564.1| hypothetical protein PTT_13096 [Pyrenophora teres f. teres 0-1]
gi|311323565|gb|EFQ90357.1| hypothetical protein PTT_13096 [Pyrenophora teres f. teres 0-1]
Length = 1306
Score = 42.5 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 62/188 (32%), Gaps = 17/188 (9%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVT-----FSSIADFQKEQDKAYQEGYNK 58
++L L D S ++S +I + ++ D ++ A G +
Sbjct: 864 SLLQYLMDNSHTDTVSVAQSNIPRLIGSGGREMENLRLETGCQIDVPGAREGADPSGRAE 923
Query: 59 AIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIR 118
+ I + E D + D + +L
Sbjct: 924 IKLKGTKKAVEEAKKILQQRAREFDDT------------VVETLDVDRKHHRNLIGGSGA 971
Query: 119 ILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYE 178
++S++ + + A +V + D I + GPKN+ I L ++++ +
Sbjct: 972 NIRSIVTSAGGPDNSRDLARMVRFPRAESDESTIRVEGPKNVVEKIIAALKAQAASLENQ 1031
Query: 179 NADTVEFS 186
++T+E S
Sbjct: 1032 TSETIEIS 1039
>gi|190360625|ref|NP_001121935.1| rho guanine nucleotide exchange factor 2 [Sus scrofa]
gi|205830905|sp|B2DCZ9|ARHG2_PIG RecName: Full=Rho guanine nucleotide exchange factor 2; AltName:
Full=Guanine nucleotide exchange factor H1; Short=GEF-H1
gi|183223977|dbj|BAG24505.1| rho/rac guanine nucleotide exchange factor 2 [Sus scrofa]
Length = 961
Score = 42.5 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 51/165 (30%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 712 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLTRANSRDGEA-GRAGAAPVA 770
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 771 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREVEEA 830
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + P+
Sbjct: 831 RRQLAALGHTEPLPAEAPWARRPLDPRRRSLPAGDALYLSFTPPQ 875
>gi|189201225|ref|XP_001936949.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984048|gb|EDU49536.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1497
Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 17/188 (9%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVT-----FSSIADFQKEQDKAYQEGYNK 58
++L L D S ++S +I + ++ D ++ A G +
Sbjct: 1056 SLLQYLMDNSHTDTVSVAQSNIPRLIGSGGREMENLRLETGCQIDVPGAREGADPSGRAE 1115
Query: 59 AIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIR 118
+ I + E D + D + +L
Sbjct: 1116 IKLKGTKKAVEEAKKILQQRAREFDDT------------VVETLDVDRKHHRNLIGGSGA 1163
Query: 119 ILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYE 178
++S++ + + A +V + D I + GPK + I L ++++ +
Sbjct: 1164 NIRSIVTSAGGPDNSRDLARMVRFPRAESDESTIRVEGPKTVVEKIIAALKAQAASLENQ 1223
Query: 179 NADTVEFS 186
++T+E S
Sbjct: 1224 TSETIEIS 1231
>gi|116198407|ref|XP_001225015.1| hypothetical protein CHGG_07359 [Chaetomium globosum CBS 148.51]
gi|88178638|gb|EAQ86106.1| hypothetical protein CHGG_07359 [Chaetomium globosum CBS 148.51]
Length = 980
Score = 41.7 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 43/121 (35%), Gaps = 7/121 (5%)
Query: 41 IADFQKEQD------KAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTS 94
+ + + EQ + Q G+ + + +K + D ++R H + + + + + +
Sbjct: 430 VLEMEAEQRRQKFEIEDRQRGHKHEVDEIRREFKGEFDQLKREHAHALEAMERRYRAELA 489
Query: 95 KAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVI 154
+ A R+ + L E + +L + A ++ L + K +
Sbjct: 490 EEQAQKSREL-QDLRSKLGAEQQDMNLDILKKEREVQEMRSQAEMLRSDLDREQAIKATL 548
Query: 155 H 155
Sbjct: 549 Q 549
>gi|1621453|gb|AAC97383.1| guanine nucleotide regulatory factor [Homo sapiens]
Length = 894
Score = 41.7 bits (96), Expect = 0.073, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 44/137 (32%), Gaps = 9/137 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 738 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 796
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 797 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 856
Query: 117 IRILKSV-LDIGLSRKA 132
R L ++ L +A
Sbjct: 857 RRQLAALGQTEQLPAEA 873
>gi|300785452|ref|YP_003765743.1| hypothetical protein AMED_3555 [Amycolatopsis mediterranei U32]
gi|299794966|gb|ADJ45341.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length = 589
Score = 41.3 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 37/122 (30%), Gaps = 2/122 (1%)
Query: 82 IADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVV 141
+ LR + +K I + + E + L + ++ +
Sbjct: 69 LRQLRPQLPAVAAKGIKVVTNAGIYHPAGLAEAIRAEVAALGLSLKVAYVTGDDLTDTAK 128
Query: 142 DFLKKGDCGKIVIHGPKNLHSLIE--ECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLE 199
D + G + P + L+ LG + + + + ++ + + T
Sbjct: 129 DLIADGQLNHLETGAPLEIDDLLAVNAYLGGWGIKTALDEGADIVITGRVADASLVTGPA 188
Query: 200 SW 201
+W
Sbjct: 189 AW 190
>gi|320159922|ref|YP_004173146.1| hypothetical protein ANT_05120 [Anaerolinea thermophila UNI-1]
gi|319993775|dbj|BAJ62546.1| hypothetical protein ANT_05120 [Anaerolinea thermophila UNI-1]
Length = 996
Score = 41.3 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 10/106 (9%)
Query: 47 EQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIA---------DLRE-LFESSTSKA 96
E+ + +E + D +W+ + F+ + H + DLRE +
Sbjct: 218 EKIEGGREARYSPVEDLRQFWEEMSRFLWQVHPALLERLEWSTALPDLREIRSSVEVLRQ 277
Query: 97 IAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+R + + L E R+L L GL R+A + A ++
Sbjct: 278 RIERLRLDAERQARQLREEEARLLSPTLGEGLLREALEDVQARLIA 323
>gi|1151158|gb|AAC63403.1| repeat organellar protein [Plasmodium chabaudi]
Length = 1939
Score = 41.3 bits (95), Expect = 0.100, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 56/153 (36%), Gaps = 17/153 (11%)
Query: 45 QKEQDKA-YQEG----YNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAI 99
+ E+ A + EG + E KS+ + +++ H + + L E ++ T+K
Sbjct: 839 ELEKRHADFVEGLEEKHKAETAKLEEGHKSEMNEVEKRHADFVEGLEEKHKAETAK---- 894
Query: 100 AVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKK-GDCGKIVIHGPK 158
+ + + LE + ++ + ++ + + + + G+ K V+ G +
Sbjct: 895 -LGEGHREVVAGLEEKHKEVVAEL--EEKHKEEIAKLEEGHKEVMAELGEKHKEVVAGLE 951
Query: 159 NLHSLIEECLGEYSSAVCYENADTVEFSTKIFG 191
H+L E + V + +
Sbjct: 952 AKHNLEE----GHKEMVAELEKRHADLVAVLEE 980
Score = 38.3 bits (87), Expect = 0.78, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 24/156 (15%)
Query: 43 DFQKEQDKAYQEGYNKAIHDRELYWK------SKNDFIQRSHDNEIADLRELFESSTSKA 96
D KE+ +E + + + E K D +++ H + + L E ++ T+K
Sbjct: 803 DQYKEEIAKLKEEHAVVVAELEEKHKLGEGHKEMVDELEKRHADFVEGLEEKHKAETAK- 861
Query: 97 IAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHG 156
+ + K + +E + GL K E A + G+ + V+ G
Sbjct: 862 ----LEEGHKSEMNEVEKRHADFV-----EGLEEKHKAETAKL-------GEGHREVVAG 905
Query: 157 PKNLHSLIEECLGE-YSSAVCYENADTVEFSTKIFG 191
+ H + L E + + E ++
Sbjct: 906 LEEKHKEVVAELEEKHKEEIAKLEEGHKEVMAELGE 941
Score = 34.8 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 23/68 (33%), Gaps = 7/68 (10%)
Query: 26 ETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADL 85
+ S++ D T + + E+ + + + E K + + H + L
Sbjct: 705 DESSSDANPDTTHKEMV-AELEKR------HAAIVAELEEKHKEEIAKLGEGHKEVVLRL 757
Query: 86 RELFESST 93
E + T
Sbjct: 758 GEQHKEET 765
>gi|274321994|ref|NP_001092351.2| rho/rac guanine nucleotide exchange factor (GEF) 2 [Bos taurus]
gi|194665281|ref|XP_001789079.1| PREDICTED: rho/rac guanine nucleotide exchange factor (GEF) 2
isoform 1 [Bos taurus]
gi|297472569|ref|XP_002686019.1| PREDICTED: rho/rac guanine nucleotide exchange factor (GEF) 2 [Bos
taurus]
gi|296489726|gb|DAA31839.1| rho/rac guanine nucleotide exchange factor (GEF) 2 [Bos taurus]
Length = 987
Score = 40.9 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 12/166 (7%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G +
Sbjct: 738 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLTRANSRDGEA-GRAGGVPAV 796
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 797 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 856
Query: 117 IRILKSV--LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ + L +A A L GD + P+
Sbjct: 857 RRQLAALGHTEPPLVAEAPWARRPLDPRRRSLPAGDALYLSFTPPQ 902
>gi|225873350|ref|YP_002754809.1| hypothetical protein ACP_1734 [Acidobacterium capsulatum ATCC
51196]
gi|225793861|gb|ACO33951.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC
51196]
Length = 391
Score = 40.6 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 51/140 (36%), Gaps = 9/140 (6%)
Query: 39 SSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDN--EIADLRELFESSTSKA 96
S + + A+ EG +A+ W+ + + SH + + R + A
Sbjct: 178 SPPTAVELLRRHAF-EGGEEALLQLLEQWERWSAELLESHISYPLLCYFRSQHSKQSWLA 236
Query: 97 IAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHG 156
+AV D+ ++ + R ++ L ++R A I+ + + ++ +I
Sbjct: 237 ALVAVLDTCALLIAGVQEQPAR--QAQLTFTMARHALIDLSQIFSIDPQQ----QIPDRL 290
Query: 157 PKNLHSLIEECLGEYSSAVC 176
P I + L VC
Sbjct: 291 PAETFQQIHDLLCASGVRVC 310
>gi|194210690|ref|XP_001915789.1| PREDICTED: rho/rac guanine nucleotide exchange factor (GEF) 2
isoform 1 [Equus caballus]
Length = 958
Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 50/165 (30%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G
Sbjct: 710 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLSRANSRDGDA-GRAGVAPGA 768
Query: 64 ELYWKSKNDFIQRSH---DNEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 769 PEKQATELALLQRQHTLLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 828
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + P+
Sbjct: 829 RRQLAALGQTEPLPAEAPWARRPLDPRRRSLPAGDALYLSFTPPQ 873
>gi|329938735|ref|ZP_08288131.1| bifunctional sensor kinase/response regulator [Streptomyces
griseoaurantiacus M045]
gi|329302226|gb|EGG46118.1| bifunctional sensor kinase/response regulator [Streptomyces
griseoaurantiacus M045]
Length = 1650
Score = 40.2 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 57/173 (32%), Gaps = 27/173 (15%)
Query: 41 IADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTS------ 94
D + +E + + + ++ + ++ H E+ LRE +
Sbjct: 265 PFDTLSAEKDRSEEQHQQELRQLAEEHAAELERVREEHAAELEALRERHAEELAAGDERY 324
Query: 95 KAIAIAVRDSFKCFSDSLECEVIRILKSV------LDIGLSRKAAIEFAAVVVDFLKKGD 148
A+ +D ++ + + + +S+ L LS AA + + +
Sbjct: 325 AALGEREKDRYEALTARYDQLFAVLGQSLRGPLDQLRAELSALAADDAGQLWPEA---NQ 381
Query: 149 CGKIVIHGPKNLHSLIEECLG------------EYSSAVCYENADTVEFSTKI 189
+ G + +L++ LG ++ + A V+ + ++
Sbjct: 382 VLHYLAAGYSRITTLLDNVLGFQRLDAGEDGLARTAAMLDAVVAAGVDGAVEL 434
>gi|326778030|ref|ZP_08237295.1| putative PAS/PAC sensor protein [Streptomyces cf. griseus
XylebKG-1]
gi|326658363|gb|EGE43209.1| putative PAS/PAC sensor protein [Streptomyces cf. griseus
XylebKG-1]
Length = 1383
Score = 40.2 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 10/106 (9%), Positives = 34/106 (32%), Gaps = 13/106 (12%)
Query: 29 ISNSTADVTFSSIADFQK---------EQD--KAYQEGYNKAIHDRELYWKSKNDFIQRS 77
+ D+T + + D + ++ + + + + ++ ++++
Sbjct: 237 GAQVPVDLTTAPVRDGDQLVGAVMTFTDRRPYEELSTQHESVVAELTTSHSAEVTALEKA 296
Query: 78 HDNEIADLRELFESSTSKAIAIAVRDSFK--CFSDSLECEVIRILK 121
H EI L+E + + + SL + ++
Sbjct: 297 HAAEIEALKEAHAAELADRSERYAAEIEGQAELLASLGAQHAQLTA 342
>gi|291397798|ref|XP_002715442.1| PREDICTED: Rho/Rac guanine nucleotide exchange factor 2 isoform 1
[Oryctolagus cuniculus]
Length = 1030
Score = 40.2 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 50/164 (30%), Gaps = 11/164 (6%)
Query: 5 VLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRE 64
+ + + L L + +T++ + + G A
Sbjct: 783 LQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLSRANSRDGDA-GRAGAGPVAP 841
Query: 65 LYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEVI 117
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 842 EKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEAR 901
Query: 118 RILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + P+
Sbjct: 902 RQLAALGHTEPLPVEAPWARRPLDPRRRSLPAGDALYLSFTPPQ 945
>gi|290959125|ref|YP_003490307.1| bifunctional sensor kinase/response regulator [Streptomyces scabiei
87.22]
gi|260648651|emb|CBG71764.1| putative bifunctional sensor kinase/response regulator
[Streptomyces scabiei 87.22]
Length = 1664
Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 26/77 (33%), Gaps = 6/77 (7%)
Query: 41 IADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTS------ 94
D E+ + E + + + + ++ H E+A+L E +
Sbjct: 265 PYDKLAEEKDSEAETHAEELERLAKEHAEELAGVREEHAAELAELSEQHAEELAAGDERY 324
Query: 95 KAIAIAVRDSFKCFSDS 111
A+ +D ++ +
Sbjct: 325 AALGEREKDRYEALAAR 341
>gi|326432603|gb|EGD78173.1| hypothetical protein PTSG_12828 [Salpingoeca sp. ATCC 50818]
Length = 1534
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 4/96 (4%)
Query: 39 SSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIA 98
++A+ + +A E + +K + + H + L E +K A
Sbjct: 1013 EALAEEHAAKQEALAEEHAAKQEALAEEHAAKQEALAEEHAAKQEALA---EEHAAKQEA 1069
Query: 99 IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAI 134
+ + +D + +V I L +RK A
Sbjct: 1070 LEKHQ-QREVADLEQRQVQEIRDCTLTDAYARKIAD 1104
Score = 39.8 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Query: 39 SSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIA 98
++A+ + +A E + +K + + H + L + + +
Sbjct: 1024 EALAEEHAAKQEALAEEHAAKQEALAEEHAAKQEALAEEHAAKQEALEKHQQREVADLEQ 1083
Query: 99 IAVRDSFKCFSDSLECEVIRILKSV 123
V++ C +L R + V
Sbjct: 1084 RQVQEIRDC---TLTDAYARKIADV 1105
>gi|194210688|ref|XP_001915809.1| PREDICTED: rho/rac guanine nucleotide exchange factor (GEF) 2
isoform 2 [Equus caballus]
Length = 986
Score = 39.8 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 50/165 (30%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G
Sbjct: 738 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLSRANSRDGDA-GRAGVAPGA 796
Query: 64 ELYWKSKNDFIQRSH---DNEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 797 PEKQATELALLQRQHTLLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 856
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + P+
Sbjct: 857 RRQLAALGQTEPLPAEAPWARRPLDPRRRSLPAGDALYLSFTPPQ 901
>gi|320009646|gb|ADW04496.1| putative PAS/PAC sensor protein [Streptomyces flavogriseus ATCC
33331]
Length = 1406
Score = 39.4 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 5/84 (5%)
Query: 54 EGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELF---ESSTSKAIAIAVRDSFKCFSD 110
E + I + +++ + + H E AD E + ++ +A + D +
Sbjct: 311 ERHAAEIAELTEKHRAEVEALTGQHAAETADRTERYAAELEEQAERLA-GLGDRHTQLTA 369
Query: 111 SLECEVIRILKSVLDIGLSRKAAI 134
L + L+ + LS AA
Sbjct: 370 VLGESLRGPLEELRGE-LSALAAD 392
Score = 39.4 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 43/144 (29%), Gaps = 24/144 (16%)
Query: 29 ISNSTADVTFSSIADFQK---------EQD--KAYQEGYNKAIHDRELYWKSKNDFIQRS 77
D+T + + D + ++ + + +N + + + +
Sbjct: 253 GDQVPVDLTTAPVRDGDQLVGAVMTFTDRRPHEELTQQHNDEVTGLTERHNDEVNGLTER 312
Query: 78 HDNEIADLRELFESSTSKAI---AIAVRDSFKCFSDSLECEVIRI---------LKSVLD 125
H EIA+L E + A D + ++ LE + R+ L +VL
Sbjct: 313 HAAEIAELTEKHRAEVEALTGQHAAETADRTERYAAELEEQAERLAGLGDRHTQLTAVLG 372
Query: 126 IGLSRKAAIEFAAVVVDFLKKGDC 149
L R E +
Sbjct: 373 ESL-RGPLEELRGELSALAADPAG 395
>gi|282863422|ref|ZP_06272481.1| putative PAS/PAC sensor protein [Streptomyces sp. ACTE]
gi|282561757|gb|EFB67300.1| putative PAS/PAC sensor protein [Streptomyces sp. ACTE]
Length = 1410
Score = 39.4 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Query: 19 SDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSH 78
D++V + ++ + + E+ E + I + +++ + +H
Sbjct: 252 GDQLVGAVMTFTDRRPYEELTEQHTAETER---LTERHAAEIAELTERHQAETTALTEAH 308
Query: 79 DNEIADLRELFESSTSK 95
E+AD E + S +
Sbjct: 309 TAELADRTERYASELEE 325
Score = 37.1 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 14/133 (10%), Positives = 32/133 (24%), Gaps = 13/133 (9%)
Query: 29 ISNSTADVTFSSIADFQK---------EQD--KAYQEGYNKAIHDRELYWKSKNDFIQRS 77
+ D+T + + D + ++ + E + ++ +
Sbjct: 237 GAAVPVDLTTAPVRDGDQLVGAVMTFTDRRPYEELTEQHTAETERLTERHAAEIAELTER 296
Query: 78 HDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRI-LKSVLDIGLSRKAAIEF 136
H E L E + + + + L +VL L R E
Sbjct: 297 HQAETTALTEAHTAELADRTERYASELEEKTERLTSLGERHTQLTAVLGESL-RGPLEEL 355
Query: 137 AAVVVDFLKKGDC 149
+
Sbjct: 356 RGELSALAADPAG 368
>gi|291397802|ref|XP_002715444.1| PREDICTED: Rho/Rac guanine nucleotide exchange factor 2 isoform 3
[Oryctolagus cuniculus]
Length = 987
Score = 39.4 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 50/164 (30%), Gaps = 11/164 (6%)
Query: 5 VLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRE 64
+ + + L L + +T++ + + G A
Sbjct: 740 LQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLSRANSRDGDA-GRAGAGPVAP 798
Query: 65 LYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEVI 117
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 799 EKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEAR 858
Query: 118 RILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + P+
Sbjct: 859 RQLAALGHTEPLPVEAPWARRPLDPRRRSLPAGDALYLSFTPPQ 902
>gi|291397800|ref|XP_002715443.1| PREDICTED: Rho/Rac guanine nucleotide exchange factor 2 isoform 2
[Oryctolagus cuniculus]
Length = 985
Score = 39.4 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 50/164 (30%), Gaps = 11/164 (6%)
Query: 5 VLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRE 64
+ + + L L + +T++ + + G A
Sbjct: 738 LQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLSRANSRDGDA-GRAGAGPVAP 796
Query: 65 LYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEVI 117
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 797 EKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEAR 856
Query: 118 RILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + P+
Sbjct: 857 RQLAALGHTEPLPVEAPWARRPLDPRRRSLPAGDALYLSFTPPQ 900
>gi|149201591|ref|ZP_01878565.1| flagellar protein FliH [Roseovarius sp. TM1035]
gi|149144639|gb|EDM32668.1| flagellar protein FliH [Roseovarius sp. TM1035]
Length = 263
Score = 39.0 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 57/167 (34%), Gaps = 9/167 (5%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
V+ L + + E + S + D + E+ A+ EG+ A+ D
Sbjct: 52 TVVRPLRAPAPEAEPAPVTATPEEKPTASFTPAPPPATFDIEAERRVAWAEGHAAALQDI 111
Query: 64 ----ELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIA---IAVRDSFKCFSDSLECEV 116
+ + + +IA+ R+ F ++ ++ + + D ++
Sbjct: 112 EAARAAARAEALEEARATAAQDIAETRDAFTAAITRLTSAENERLADLSTKLELAVRQLA 171
Query: 117 IRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSL 163
+ +D + + + + + G +V+ P +L ++
Sbjct: 172 TQRAGQKIDE--APRPFLRRIEKITHQIAAGAENTVVLMNPADLMAI 216
>gi|194332685|ref|NP_001123832.1| leucine rich repeat containing 48 [Xenopus (Silurana) tropicalis]
gi|189442313|gb|AAI67655.1| LOC100170587 protein [Xenopus (Silurana) tropicalis]
Length = 522
Score = 39.0 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 24/201 (11%), Positives = 68/201 (33%), Gaps = 29/201 (14%)
Query: 45 QKEQDKAYQEGYNKAIHD-RELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRD 103
Q E+ +A +N+ + + + IQ + L EL +S + + +
Sbjct: 294 QHEKREAEAFEFNECMQEAIRENQEQGAKKIQELTEKNSEILNELSQSGNQDFLDLKISQ 353
Query: 104 SFKCFSDSLECEVIRILKSV-LDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKN--- 159
+ L+ + L+ V + ++ + +V FL+ + +N
Sbjct: 354 YIDDINKLLDSLMTLELQLVDQTEEIIKEYERNVSDMVSAFLETVQGLMAQVRDLENHHH 413
Query: 160 ----------LHSLIEECLGEYSS---AVCYENADTVE-----------FSTKIFGSVIK 195
L +++ + + + + + + DTV +
Sbjct: 414 EKLLEISINLLEKVLKGEMDDEITDDIRMIFVDKDTVINAVSASHDIHLLKIDNREDELV 473
Query: 196 TRLESWLSDVKAKIVSQQVSK 216
T++ +W +++ K+ ++ +
Sbjct: 474 TKMNTWANNLIQKVQKDEIQR 494
>gi|114321988|ref|YP_743671.1| transketolase [Alkalilimnicola ehrlichii MLHE-1]
gi|114228382|gb|ABI58181.1| transketolase [Alkalilimnicola ehrlichii MLHE-1]
Length = 665
Score = 39.0 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 14/86 (16%)
Query: 47 EQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFK 106
E+ AY++ + + + E K + L E F +A+A AV +S K
Sbjct: 309 ERLAAYRKAHPEMAAEFERRMKGE--------------LPERFAQHAEEALAEAVDESAK 354
Query: 107 CFSDSLECEVIRILKSVLDIGLSRKA 132
+ + + L L L A
Sbjct: 355 VATRKASEQALNRLGPYLPELLGGSA 380
>gi|149744441|ref|XP_001488971.1| PREDICTED: BCL6 co-repressor isoform 2 [Equus caballus]
Length = 1721
Score = 39.0 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 43/133 (32%), Gaps = 9/133 (6%)
Query: 10 EDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHD------- 62
+D D+ SE + D+ +K++ + + +
Sbjct: 1100 KDLPVENYFVDRQPASEPPADQAATDMPHDPTLQLEKKRKISDDSKHADTTVEELPEDPL 1159
Query: 63 RELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKS 122
++ K + + + LRE +E S+ + R K + +++ + +
Sbjct: 1160 LKIKRKRVSKGLHPKKQRHLLHLRERWEQQVSE--SKPGRQGRKEVTQAIQPRAVTQGTN 1217
Query: 123 VLDIGLSRKAAIE 135
+ + SRK
Sbjct: 1218 ISEEKASRKGTEA 1230
>gi|296229138|ref|XP_002760069.1| PREDICTED: rho guanine nucleotide exchange factor 2-like
[Callithrix jacchus]
Length = 926
Score = 38.6 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 11/165 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 678 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 736
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 737 PAQQATELALLQRLHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 796
Query: 117 IRILKSV-LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
R L ++ L +A A L GD + + P+
Sbjct: 797 RRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQ 841
>gi|260222428|emb|CBA31982.1| hypothetical protein Csp_D29840 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 236
Score = 38.6 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 39/113 (34%), Gaps = 7/113 (6%)
Query: 50 KAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSK---AIAIAVRDSFK 106
+ Y +G+ +A + + + +A L ++ ++ A+A V +
Sbjct: 66 EGYAQGHAQATLEGQRQLNDYIANEGKVAAEAMAQLFANAQTQLAESEQAMAQGVLELAC 125
Query: 107 CFSDSLECEVI----RILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIH 155
+ + + L+ V+ LS A AA+V + V+
Sbjct: 126 EIARQVLRHEMSSNPNALQPVVREALSVLAIDSKAALVRMNPLDVEVLSEVLR 178
>gi|291446246|ref|ZP_06585636.1| two-component system sensor kinase/response regulator [Streptomyces
roseosporus NRRL 15998]
gi|291349193|gb|EFE76097.1| two-component system sensor kinase/response regulator [Streptomyces
roseosporus NRRL 15998]
Length = 781
Score = 38.6 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 9/106 (8%), Positives = 32/106 (30%), Gaps = 13/106 (12%)
Query: 29 ISNSTADVTFSSIADFQK---------EQD--KAYQEGYNKAIHDRELYWKSKNDFIQRS 77
D+T + + D + ++ + + + + ++ ++ +
Sbjct: 250 GDRVPVDLTTAPVRDGDQLVGAVMTFTDRRPYEELSAQHKNVVAELTTSHSAEVTALKEA 309
Query: 78 HDNEIADLRELFESSTSKAIAIAVRDSFK--CFSDSLECEVIRILK 121
H E+ L+E + + + SL + ++
Sbjct: 310 HAKELEALKEAHAAELADRSERYAAEIEGQAELLASLSAQHAQLTA 355
>gi|310790702|gb|EFQ26235.1| hypothetical protein GLRG_01379 [Glomerella graminicola M1.001]
Length = 753
Score = 38.6 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 25/188 (13%), Positives = 63/188 (33%), Gaps = 20/188 (10%)
Query: 5 VLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRE 64
+ +DF ++++ + + ++ + + F+ E+ A H+ E
Sbjct: 556 LSKYQKDFKH---YANQVADWDLGLVDNGEKIQKLYLNTFEAEK----------ASHEIE 602
Query: 65 LYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVL 124
++ S +E+ D +ES + + + E E L L
Sbjct: 603 RQLQA-----VESQQDELEDWLNRYESDVKEMFSRQMGQGETLTGPDQERERTYKLAEKL 657
Query: 125 DIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVE 184
L K+ + + +V + + P++ S I L + S + + + +
Sbjct: 658 TQNLDEKS-RDLSKMVKE-INDISGTLSKGSKPEDPLSQIVRVLNGHLSQLQWIDTNAAS 715
Query: 185 FSTKIFGS 192
K+ +
Sbjct: 716 LQAKVSAA 723
>gi|239989236|ref|ZP_04709900.1| putative two-component system sensor kinase/response regulator,
bifunctional protein [Streptomyces roseosporus NRRL
11379]
Length = 718
Score = 38.6 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 9/106 (8%), Positives = 32/106 (30%), Gaps = 13/106 (12%)
Query: 29 ISNSTADVTFSSIADFQK---------EQD--KAYQEGYNKAIHDRELYWKSKNDFIQRS 77
D+T + + D + ++ + + + + ++ ++ +
Sbjct: 196 GDRVPVDLTTAPVRDGDQLVGAVMTFTDRRPYEELSAQHKNVVAELTTSHSAEVTALKEA 255
Query: 78 HDNEIADLRELFESSTSKAIAIAVRDSFK--CFSDSLECEVIRILK 121
H E+ L+E + + + SL + ++
Sbjct: 256 HAKELEALKEAHAAELADRSERYAAEIEGQAELLASLSAQHAQLTA 301
>gi|333025839|ref|ZP_08453903.1| putative two-component system sensor kinase/response regulator,
bifunctional protein [Streptomyces sp. Tu6071]
gi|332745691|gb|EGJ76132.1| putative two-component system sensor kinase/response regulator,
bifunctional protein [Streptomyces sp. Tu6071]
Length = 1431
Score = 38.6 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 34/167 (20%)
Query: 21 KIVLSETIISNSTADVTFSSIADFQK--------EQDKAYQE---GYNKAIHDRELYWKS 69
VL D+T + + D + +AY+E + + S
Sbjct: 212 GQVLWNKKGEKVPVDLTTAPVRDGDQLVGAVMTFTDRRAYEELVERHAAESGELRESHAS 271
Query: 70 KNDFIQRSHDNEIADLRELFESSTSKAIA---IAVRDSFKCFSDSLECEVIRILKSVLDI 126
+ ++ +H E+A L E +E+ ++ A AV + ++ E E R
Sbjct: 272 EVAGLRETHAAEVAGLTEGYEARIAELEARHEEAVAQAQDRYAALAEREKDRF------E 325
Query: 127 GLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSS 173
L+ + + AV+ L GP + LG ++
Sbjct: 326 ALAARH-EQLLAVLETSL----------RGPL---DELRRELGTLAA 358
>gi|302897116|ref|XP_003047437.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728367|gb|EEU41724.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 939
Score = 38.6 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 48 QDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLR-ELFESSTSKAIAIAVRDS-- 104
+ +A +E A + ++S Q+ H EI R ++ + S+AI+ A D+
Sbjct: 275 RQEAGEEARIAAEGMKTETYQSTAPQKQQQHFTEIEGSRGNVYSEADSQAISKARFDAWR 334
Query: 105 -FKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIV 153
+ S + +K V+ + E A + + D +
Sbjct: 335 QAEEASQFSHQQEKPTIKPVMKSPTASPNLAEIAGSPGNVYTEADSQPVT 384
>gi|239942777|ref|ZP_04694714.1| putative two-component system sensor kinase/response regulator,
bifunctional protein [Streptomyces roseosporus NRRL
15998]
Length = 768
Score = 38.6 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 9/106 (8%), Positives = 32/106 (30%), Gaps = 13/106 (12%)
Query: 29 ISNSTADVTFSSIADFQK---------EQD--KAYQEGYNKAIHDRELYWKSKNDFIQRS 77
D+T + + D + ++ + + + + ++ ++ +
Sbjct: 237 GDRVPVDLTTAPVRDGDQLVGAVMTFTDRRPYEELSAQHKNVVAELTTSHSAEVTALKEA 296
Query: 78 HDNEIADLRELFESSTSKAIAIAVRDSFK--CFSDSLECEVIRILK 121
H E+ L+E + + + SL + ++
Sbjct: 297 HAKELEALKEAHAAELADRSERYAAEIEGQAELLASLSAQHAQLTA 342
>gi|114321410|ref|YP_743093.1| transketolase [Alkalilimnicola ehrlichii MLHE-1]
gi|114227804|gb|ABI57603.1| transketolase [Alkalilimnicola ehrlichii MLHE-1]
Length = 666
Score = 38.3 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 14/86 (16%)
Query: 47 EQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFK 106
E+ AY++ + + + E K L E F +A+A AV +S K
Sbjct: 309 ERLAAYRKAHPEMAAEFERRMKGA--------------LPERFAQHAEEALAEAVDESAK 354
Query: 107 CFSDSLECEVIRILKSVLDIGLSRKA 132
+ + + L L L A
Sbjct: 355 VATRKASEQALNRLGPYLPELLGGSA 380
>gi|88797787|ref|ZP_01113375.1| GAF sensor hybrid histidine kinase [Reinekea sp. MED297]
gi|88779464|gb|EAR10651.1| GAF sensor hybrid histidine kinase [Reinekea sp. MED297]
Length = 579
Score = 37.9 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 20/163 (12%)
Query: 47 EQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIAD----LRELFESSTSKAIAIAVR 102
E D+A A HD ++ N ++Q + L+ ++ + +
Sbjct: 215 EADQAKSRFLAAASHDLRQPLQAANLYLQTLSSRAESQDELLLKAKHSVESANELLTKLL 274
Query: 103 DSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKI------VIHG 156
D S V ++ + EFA + KG +I V
Sbjct: 275 D----MSLLDANVVTVSIQPCQLQSMLDAIESEFAE---QAMSKGLKLRIAPMPVEVSTD 327
Query: 157 PKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLE 199
P L ++ +G AV Y A +V+ S ++ + R+E
Sbjct: 328 PVLLMQILRNLIGN---AVKYTRAGSVDVSVELRETQATLRIE 367
>gi|297200812|ref|ZP_06918209.1| two-component system sensor kinase/response regulator [Streptomyces
sviceus ATCC 29083]
gi|297147736|gb|EDY56420.2| two-component system sensor kinase/response regulator [Streptomyces
sviceus ATCC 29083]
Length = 667
Score = 37.9 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 7/55 (12%), Positives = 23/55 (41%)
Query: 41 IADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSK 95
D ++ ++ + + + E S+ +++ H E+ +L+E + +
Sbjct: 265 PYDALADEKSTAEKAHAEELDRLEEEHASELTALRQKHITELEELQERHDEELAA 319
>gi|254443791|ref|ZP_05057267.1| AMP-binding enzyme, putative [Verrucomicrobiae bacterium DG1235]
gi|198258099|gb|EDY82407.1| AMP-binding enzyme, putative [Verrucomicrobiae bacterium DG1235]
Length = 540
Score = 37.9 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 37/124 (29%), Gaps = 17/124 (13%)
Query: 67 WKSKNDFIQRSH------DNEIADLRELFESSTSKAIAIAVRDSF-KCFSDSLECEVIRI 119
K + H E+ + + + + A C L RI
Sbjct: 294 MKQYKRILTHGHVHSPYGATEVLPVSSVSDDEVLEVAAERTAKGEGTCVGRILPGVEARI 353
Query: 120 LKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYEN 179
L + D L A L +G+ G+IV+ GP + + L E +
Sbjct: 354 L-PMTDEVLGVAALEN-------RLPQGEIGEIVVTGPSVTKAY--DQLPEATRLSKIVE 403
Query: 180 ADTV 183
D V
Sbjct: 404 GDRV 407
>gi|281207628|gb|EFA81810.1| leucine-rich repeat-containing protein [Polysphondylium pallidum
PN500]
Length = 1225
Score = 37.5 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 12/137 (8%)
Query: 39 SSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFES-STSKAI 97
S A EQ A + + + D + K + I++ H A LR+L E + A
Sbjct: 616 SPPASINAEQTIAVAQAFAQNAIDNKKRKKENLNEIKKQHIEAEAQLRQLKEELVLANAK 675
Query: 98 AIAVRDSFKCFSDSLECEVIRIL-------KSVLDIGLSRKAAI----EFAAVVVDFLKK 146
A + + + L + L ++ + V+
Sbjct: 676 ATKFEEEAAVLHQLHQLQPSIPLPQILLSNQPQLWDNIASPPINTPPTSVSPVLTSANVA 735
Query: 147 GDCGKIVIHGPKNLHSL 163
+I + P H
Sbjct: 736 NAISQISLLSPTQQHHQ 752
>gi|327357495|gb|EGE86352.1| class V myosin [Ajellomyces dermatitidis ATCC 18188]
Length = 1570
Score = 37.5 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 9/146 (6%)
Query: 44 FQKEQDKAYQEGYNKAIHDRELY-WKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
+ + E I +L + +Q++H +A ++ L E ++ V
Sbjct: 979 LEARTRELQAEANQAGISAAQLAALEEDMTKLQQNHAEALATVKRLQEEEKVSRESLKVA 1038
Query: 103 DSFKC------FSDSLECEVIRILKSVLDIGLS-RKAAIEFAAVVVDFLKKGDCGKIVIH 155
+ + +E E +R L S L L K ++ + D L+ G + I
Sbjct: 1039 TAELEKLRQANSDNEVEKESLRQLISELQDELELAKRSVPVNGLNGD-LQNGAAAQPGIT 1097
Query: 156 GPKNLHSLIEECLGEYSSAVCYENAD 181
G NL S + S+ AD
Sbjct: 1098 GLINLVSSKKPKPKRRSAGTERIEAD 1123
>gi|52308170|gb|AAU38670.1| ProS protein [Mannheimia succiniciproducens MBEL55E]
Length = 589
Score = 37.5 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 6/104 (5%)
Query: 92 STSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDI--GLSRKAAIEFAAVVVDFLKKGDC 149
++AIA+ R ++ + + +++ K +V ++
Sbjct: 252 ELAEAIAVGERAQPGAAMQLVDTPNAKTIAELVEQFNLPIEKTVKTL--IVKGATEEQPL 309
Query: 150 GKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSV 193
++I G +L+ + E L E +S + AD + KI V
Sbjct: 310 VALIIRGDHDLNEIKAEKLPEVASPFEF--ADEADIKAKIGAGV 351
>gi|159122695|gb|EDP47816.1| C2H2 finger domain protein [Aspergillus fumigatus A1163]
Length = 739
Score = 37.5 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 47/173 (27%), Gaps = 22/173 (12%)
Query: 7 SRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQK--------EQDKAYQEGYNK 58
D + + + + + AD Q+ + Y +G
Sbjct: 28 RYDTDLTEPEDEDVPLQDA-SDAALLFADNEHPPEYYIQQLANFDETIYTQEDYAKGTTN 86
Query: 59 AIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAI----AVRDSFKCFSDSLEC 114
+ + W +++ E+ R ++E+ TS I +R + + +
Sbjct: 87 LLDRVKEKWSQFCACLRKDPQEELELFRLVYENETSNKIGKQMNRQMRRVIRQLAKKHKL 146
Query: 115 EVIRILKSVLDIGLSRKAAIEFAAVVVDFLK--KGDCGKIVIHGPKNLHSLIE 165
K +D + A VV + + G L +
Sbjct: 147 SSKGRDKPPMD-------VEDLAKVVETTISTTEKKFGHGRHRIELALFLQLA 192
>gi|261190827|ref|XP_002621822.1| class V myosin [Ajellomyces dermatitidis SLH14081]
gi|239590866|gb|EEQ73447.1| class V myosin [Ajellomyces dermatitidis SLH14081]
Length = 1499
Score = 37.5 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 9/146 (6%)
Query: 44 FQKEQDKAYQEGYNKAIHDRELY-WKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
+ + E I +L + +Q++H +A ++ L E ++ V
Sbjct: 908 LEARTRELQAEANQAGISAAQLAALEEDMTKLQQNHAEALATVKRLQEEEKVSRESLKVA 967
Query: 103 DSFKC------FSDSLECEVIRILKSVLDIGLS-RKAAIEFAAVVVDFLKKGDCGKIVIH 155
+ + +E E +R L S L L K ++ + D L+ G + I
Sbjct: 968 TAELEKLRQANSDNEVEKESLRQLISELQDELELAKRSVPVNGLNGD-LQNGAAAQPGIT 1026
Query: 156 GPKNLHSLIEECLGEYSSAVCYENAD 181
G NL S + S+ AD
Sbjct: 1027 GLINLVSSKKPKPKRRSAGTERIEAD 1052
>gi|239613228|gb|EEQ90215.1| class V myosin [Ajellomyces dermatitidis ER-3]
Length = 1499
Score = 37.5 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 9/146 (6%)
Query: 44 FQKEQDKAYQEGYNKAIHDRELY-WKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVR 102
+ + E I +L + +Q++H +A ++ L E ++ V
Sbjct: 908 LEARTRELQAEANQAGISAAQLAALEEDMTKLQQNHAEALATVKRLQEEEKVSRESLKVA 967
Query: 103 DSFKC------FSDSLECEVIRILKSVLDIGLS-RKAAIEFAAVVVDFLKKGDCGKIVIH 155
+ + +E E +R L S L L K ++ + D L+ G + I
Sbjct: 968 TAELEKLRQANSDNEVEKESLRQLISELQDELELAKRSVPVNGLNGD-LQNGAAAQPGIT 1026
Query: 156 GPKNLHSLIEECLGEYSSAVCYENAD 181
G NL S + S+ AD
Sbjct: 1027 GLINLVSSKKPKPKRRSAGTERIEAD 1052
>gi|157785631|ref|NP_001099097.1| myosin phosphatase Rho-interacting protein [Bos taurus]
gi|157279334|gb|AAI53231.1| M-RIP protein [Bos taurus]
gi|296476594|gb|DAA18709.1| myosin phosphatase-Rho interacting protein [Bos taurus]
Length = 1006
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 691 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 750
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 751 SAIEAMKNAHREEMERELEKSQRSQISSVNADV--EALRRQYLEELQSVQRE 800
>gi|77404361|ref|NP_001029194.1| myosin phosphatase Rho-interacting protein isoform 2 [Rattus
norvegicus]
gi|68534571|gb|AAH98911.1| Myosin phosphatase Rho interacting protein [Rattus norvegicus]
Length = 993
Score = 37.1 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 678 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 737
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 738 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 787
>gi|321469903|gb|EFX80881.1| hypothetical protein DAPPUDRAFT_303739 [Daphnia pulex]
Length = 1924
Score = 37.1 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Query: 47 EQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFK 106
E+ A Q + + + + K + R H+ I +R+ + + A
Sbjct: 1338 ERMSALQAAHQASQSQLQRKIQQKQEESARRHEENIEQIRQKALELSILRFSSA--GGAD 1395
Query: 107 CFSDSLECEVIRI 119
+ E R+
Sbjct: 1396 DAPRLVHYETARV 1408
>gi|302552570|ref|ZP_07304912.1| hypothetical protein SSQG_03799 [Streptomyces viridochromogenes DSM
40736]
gi|302470188|gb|EFL33281.1| hypothetical protein SSQG_03799 [Streptomyces viridochromogenes DSM
40736]
Length = 1687
Score = 37.1 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 28/77 (36%), Gaps = 6/77 (7%)
Query: 41 IADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTS------ 94
D E+ +A + + + + S+ +++ H E+ +LRE
Sbjct: 265 PYDAVVEEKEAADKRHEEELERVAEEHASELTALRQQHVTELEELRERHAEELGANEDRY 324
Query: 95 KAIAIAVRDSFKCFSDS 111
A+ +D ++ +
Sbjct: 325 AALGEREKDRYEALAAR 341
>gi|119385362|ref|YP_916418.1| hypothetical protein Pden_2635 [Paracoccus denitrificans PD1222]
gi|119375129|gb|ABL70722.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 411
Score = 37.1 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 37/123 (30%), Gaps = 12/123 (9%)
Query: 23 VLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEI 82
L+ + S + S+ E I + ++ D ++ D E
Sbjct: 17 ALAGLVGKESPTEDETRSMETMDAEYRANETRYRAALIAEDTERREAGAD-LETRSDREY 75
Query: 83 ADLRELFE-------SSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIE 135
A+L FE +A++ A ++ + + V L +A
Sbjct: 76 AELVGRFELRQVALAIDEGRALSGATKEVVDELRSKGGYQGV----PVPLAALETRAGET 131
Query: 136 FAA 138
AA
Sbjct: 132 VAA 134
>gi|20455213|sp|Q9ERE6|MPRIP_RAT RecName: Full=Myosin phosphatase Rho-interacting protein; AltName:
Full=Rho-interacting protein 3; Short=RIP3; AltName:
Full=p116Rip
gi|10803059|gb|AAG23699.1|AF311311_1 P116RIP [Rattus norvegicus]
Length = 1029
Score = 37.1 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 714 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 773
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 774 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 823
>gi|295837859|ref|ZP_06824792.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295826707|gb|EFG64991.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 677
Score = 37.1 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 34/167 (20%)
Query: 21 KIVLSETIISNSTADVTFSSIADFQK--------EQDKAYQE---GYNKAIHDRELYWKS 69
VL D+T + + D + +AY+E + +
Sbjct: 244 GQVLWNKKGEKVPVDLTTAPVRDGDQLVGAVMTFTDRRAYEELVERHAAESAELRESHAG 303
Query: 70 KNDFIQRSHDNEIADLRELFESSTSKAIA---IAVRDSFKCFSDSLECEVIRILKSVLDI 126
+ ++ +H E+A L +E+ ++ A AV + ++ E E R
Sbjct: 304 EVAGLREAHAAEVAGLTGEYEARIAELDARHEEAVAQAQDRYAALAEREKDRF------E 357
Query: 127 GLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSS 173
L+ + + AV+ L GP + LG ++
Sbjct: 358 ALAARH-EQLLAVLETSL----------RGPL---DELRRELGTLAA 390
>gi|77404359|ref|NP_446266.2| myosin phosphatase Rho-interacting protein isoform 1 [Rattus
norvegicus]
gi|149052803|gb|EDM04620.1| myosin phosphatase-Rho interacting protein [Rattus norvegicus]
Length = 1029
Score = 37.1 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 714 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 773
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 774 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 823
>gi|161510954|ref|YP_089255.2| prolyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
gi|114152209|sp|Q65QU0|SYP_MANSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
ligase; Short=ProRS
Length = 571
Score = 37.1 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 6/104 (5%)
Query: 92 STSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDI--GLSRKAAIEFAAVVVDFLKKGDC 149
++AIA+ R ++ + + +++ K +V ++
Sbjct: 234 ELAEAIAVGERAQPGAAMQLVDTPNAKTIAELVEQFNLPIEKTVKTL--IVKGATEEQPL 291
Query: 150 GKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSV 193
++I G +L+ + E L E +S + AD + KI V
Sbjct: 292 VALIIRGDHDLNEIKAEKLPEVASPFEF--ADEADIKAKIGAGV 333
>gi|114668920|ref|XP_001160652.1| PREDICTED: myosin phosphatase-Rho interacting protein isoform 1
[Pan troglodytes]
Length = 1025
Score = 36.7 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 708 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 767
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 768 SAIEAMKNAHREEMERELEKSQRSQISSVNSDV--EALRRQYLEELQSVQRE 817
>gi|156393762|ref|XP_001636496.1| predicted protein [Nematostella vectensis]
gi|156223600|gb|EDO44433.1| predicted protein [Nematostella vectensis]
Length = 1461
Score = 36.7 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 58/182 (31%), Gaps = 18/182 (9%)
Query: 50 KAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFS 109
+A E Y I + E + + I H EI ++ +E S + +C S
Sbjct: 1237 EAVHEQYRDEIVELESRHSAHVEEILEEHQLEIETIKADYEEQRSALETKLFAVTSECTS 1296
Query: 110 DSLECE----------------VIRILKSVLDIGLSRKAAIEFA-AVVVDFLKKGDCGKI 152
+++ + I KS+ D S KA ++ + K K+
Sbjct: 1297 LNIKLQRLQEETEQDIENRIQDAIEKYKSLPDELASMKAVLDMKNDEIKQLRKDRMEAKM 1356
Query: 153 VIHGPKNLHSLIEECLGEYSSAVCYENA-DTVEFSTKIFGSVIKTRLESWLSDVKAKIVS 211
+ + I + E S E + +KT LE + +K +
Sbjct: 1357 ELDHLRTKADRIRKLEQENESLSFVVETKSKFERQLSVERETLKTTLERESAKLKRLSLE 1416
Query: 212 QQ 213
+
Sbjct: 1417 NE 1418
>gi|119576128|gb|EAW55724.1| myosin phosphatase-Rho interacting protein, isoform CRA_d [Homo
sapiens]
Length = 1000
Score = 36.7 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 672 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 731
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 732 SAIEAMKNAHREEMERELEKSQRSQISSVNSDV--EALRRQYLEELQSVQRE 781
>gi|50980301|ref|NP_958431.2| myosin phosphatase Rho-interacting protein isoform 2 [Homo sapiens]
gi|215274136|sp|Q6WCQ1|MPRIP_HUMAN RecName: Full=Myosin phosphatase Rho-interacting protein;
Short=M-RIP; AltName: Full=Rho-interacting protein 3;
Short=RIP3; AltName: Full=p116Rip
Length = 1025
Score = 36.7 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 710 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 769
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 770 SAIEAMKNAHREEMERELEKSQRSQISSVNSDV--EALRRQYLEELQSVQRE 819
>gi|332848396|ref|XP_003315640.1| PREDICTED: myosin phosphatase Rho-interacting protein [Pan
troglodytes]
Length = 1023
Score = 36.7 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 708 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 767
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 768 SAIEAMKNAHREEMERELEKSQRSQISSVNSDV--EALRRQYLEELQSVQRE 817
>gi|34224023|gb|AAQ63176.1| myosin phosphatase-Rho interacting protein [Homo sapiens]
Length = 1024
Score = 36.7 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 709 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 768
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 769 SAIEAMKNAHREEMERELEKSQRSQISSVNSDV--EALRRQYLEELQSVQRE 818
>gi|326665580|ref|XP_002661092.2| PREDICTED: GTPase IMAP family member 8-like [Danio rerio]
Length = 846
Score = 36.7 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 8/107 (7%)
Query: 47 EQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFK 106
EQ K ++E K E ++ +++ H+ E +L+E + T + + +
Sbjct: 726 EQQKQFEEKIRKTEMALEEQQQNLIKYLEEKHEKEKQNLKERIQRETRE-------QAEQ 778
Query: 107 CFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIV 153
+ + LE EV + L+ D L + A G +V
Sbjct: 779 EYREKLEQEVAKALREA-DEQLPKTARRACEWSQRAGFIGAVAGSVV 824
>gi|188997542|ref|YP_001931793.1| conserved hypothetical protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932609|gb|ACD67239.1| conserved hypothetical protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 225
Score = 36.7 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 81/202 (40%), Gaps = 16/202 (7%)
Query: 9 LEDFSRLGSLSDKIVLSETIIS-----NSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
L DF++L ++S+K+ E + + + + E++ AY++G+ A
Sbjct: 5 LTDFTQLKNISEKLEEKENDNNLEKEIEILKNQINQLLKQIEIEKENAYKKGFEDATKSL 64
Query: 64 ELYWKSKNDFI---QRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRIL 120
E +K+ + + N+ + T + I +++ ++ + + + +
Sbjct: 65 EEKYKNILEQKIKEIEASFNDKSSAEIKQAQDTIEKIQNSLKQHYQIYLAKISEIISDSI 124
Query: 121 KSVLD-----IGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAV 175
+L+ K A + ++ + L++ KI + +NL L+++ L S +
Sbjct: 125 AEILEFLYIYEKDPEKVAEKINEILEE-LREFKVLKIKVSKDQNL-ELLQKFLSNVSLEI 182
Query: 176 CYENADTVEFSTKIFGSVIKTR 197
E + +F + I+ +
Sbjct: 183 D-EKLEGNDFIIEFDNGKIENK 203
>gi|332261690|ref|XP_003279898.1| PREDICTED: LOW QUALITY PROTEIN: myosin phosphatase Rho-interacting
protein-like [Nomascus leucogenys]
Length = 1033
Score = 36.7 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 705 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 764
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 765 SAIEAMKNAHREEMERELEKSQRSQISSVNSDV--EALRRQYLEELQSVQRE 814
>gi|226874922|ref|NP_036157.2| myosin phosphatase Rho-interacting protein isoform 2 [Mus musculus]
gi|88984467|sp|P97434|MPRIP_MOUSE RecName: Full=Myosin phosphatase Rho-interacting protein; AltName:
Full=Rho-interacting protein 3; Short=RIP3; AltName:
Full=p116Rip
gi|56205311|emb|CAI24303.1| myosin phosphatase Rho interacting protein [Mus musculus]
Length = 1024
Score = 36.7 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 709 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 768
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 769 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 818
>gi|1657837|gb|AAB18198.1| p116Rip [Mus musculus]
Length = 1024
Score = 36.7 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 709 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 768
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 769 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 818
>gi|327349196|gb|EGE78053.1| kinesin motor domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 936
Score = 36.7 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 34/94 (36%), Gaps = 5/94 (5%)
Query: 13 SRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKND 72
SRL S+ + + + D+ D + + +A + I + K +
Sbjct: 382 SRLLSVEKSLKDASRDHEIAIDDLDRQHRIDLETSRQEARNQ-----IEELVARHKEELR 436
Query: 73 FIQRSHDNEIADLRELFESSTSKAIAIAVRDSFK 106
++R DNE+ + R ++ A D +
Sbjct: 437 ELRRRFDNEVENERSKLRQELNQMNAQTSMDIQR 470
>gi|50980307|ref|NP_055949.2| myosin phosphatase Rho-interacting protein isoform 1 [Homo sapiens]
gi|168273108|dbj|BAG10393.1| myosin phosphatase Rho-interacting protein [synthetic construct]
Length = 1038
Score = 36.7 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 710 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 769
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 770 SAIEAMKNAHREEMERELEKSQRSQISSVNSDV--EALRRQYLEELQSVQRE 819
>gi|162457170|ref|YP_001619537.1| protein kinase [Sorangium cellulosum 'So ce 56']
gi|161167752|emb|CAN99057.1| Protein kinase [Sorangium cellulosum 'So ce 56']
Length = 650
Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 24/141 (17%)
Query: 53 QEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSL 112
Q G +A D+ + ++ RS D E LR+ TS A+ +R+ + +
Sbjct: 391 QRGDLEATIDKTIKHVAELRRNARS-DEENKILRQF----TSAALIERIREMGPAIALAS 445
Query: 113 ECEVIRI-------LKSVLDIGLSRKAA----IEFAAVVVDFLKKG--------DCGKIV 153
E + + V L +A F +V + + KG D V
Sbjct: 446 EAVMATVAFIDIFQFTPVTRERLPGEAMRLLRANFEVIVPELVAKGGVVDKFLGDAVMTV 505
Query: 154 IHGPKNLHSLIEECLGEYSSA 174
GP +L + C+ +
Sbjct: 506 FQGPDHLSRALSACVAVRAQM 526
>gi|114668914|ref|XP_001160793.1| PREDICTED: myosin phosphatase Rho-interacting protein isoform 4
[Pan troglodytes]
Length = 1036
Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 708 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 767
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 768 SAIEAMKNAHREEMERELEKSQRSQISSVNSDV--EALRRQYLEELQSVQRE 817
>gi|56205312|emb|CAI24304.1| myosin phosphatase Rho interacting protein [Mus musculus]
Length = 986
Score = 36.3 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 671 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 730
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 731 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 780
>gi|29612618|gb|AAH49803.1| Mprip protein [Mus musculus]
Length = 976
Score = 36.3 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 661 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 720
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 721 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 770
>gi|74221141|dbj|BAE42072.1| unnamed protein product [Mus musculus]
Length = 1037
Score = 36.3 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 709 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 768
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 769 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 818
>gi|309812739|ref|ZP_07706478.1| catalase [Dermacoccus sp. Ellin185]
gi|308433256|gb|EFP57149.1| catalase [Dermacoccus sp. Ellin185]
Length = 693
Score = 36.3 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 43/149 (28%), Gaps = 11/149 (7%)
Query: 13 SRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKND 72
R + + T + + E + E + +WKS+ +
Sbjct: 405 GRANYEPNGFSGDDRGPRALTTFQPDTYPTKVEGEARRLRAESFADHYSQANQFWKSQTE 464
Query: 73 FIQRSHDNEIA-DLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRK 131
Q+ + A +L + + +R+ + + + E L L K
Sbjct: 465 VEQKHIVDAFAFELGKCEIPEIRTRMLGNLRNVDESLAQRVADE----LAMELPEASPAK 520
Query: 132 AAIEFAAVVVDFLKKGDCGKIVIHGPKNL 160
A L + IV +GP +
Sbjct: 521 VAP------RHDLPVSEALSIVKNGPDSF 543
>gi|74222752|dbj|BAE42242.1| unnamed protein product [Mus musculus]
Length = 1037
Score = 36.3 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 709 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 768
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 769 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 818
>gi|74212775|dbj|BAE33355.1| unnamed protein product [Mus musculus]
Length = 1037
Score = 36.3 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 709 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 768
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 769 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 818
>gi|74191775|dbj|BAE32843.1| unnamed protein product [Mus musculus]
Length = 1037
Score = 36.3 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 709 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 768
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 769 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 818
>gi|41152239|ref|NP_957697.1| myosin phosphatase Rho-interacting protein isoform 1 [Mus musculus]
gi|38648699|gb|AAH63067.1| Myosin phosphatase Rho interacting protein [Mus musculus]
gi|74199428|dbj|BAE34450.1| unnamed protein product [Mus musculus]
Length = 1037
Score = 36.3 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 709 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 768
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 769 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 818
>gi|326427892|gb|EGD73462.1| hypothetical protein PTSG_12268 [Salpingoeca sp. ATCC 50818]
Length = 707
Score = 36.3 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 8/69 (11%), Positives = 23/69 (33%)
Query: 39 SSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIA 98
++A+ + +A E + +K + + H + L + + +
Sbjct: 156 EALAEEHAAKQEALAEEHAAKQEALAEEHAAKQEALAEEHAAKQEALEKHQQREVADLEQ 215
Query: 99 IAVRDSFKC 107
V++ C
Sbjct: 216 RQVQEIRDC 224
Score = 35.9 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 4/96 (4%)
Query: 39 SSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIA 98
++A+ + +A E + +K + + H + L E +K A
Sbjct: 145 EALAEEHAAKQEALAEEHAAKQEALAEEHAAKQEALAEEHAAKQEALA---EEHAAKQEA 201
Query: 99 IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAI 134
+ + +D + +V I L +RK A
Sbjct: 202 LEKHQ-QREVADLEQRQVQEIRDCTLTDAYARKIAD 236
>gi|223460494|gb|AAI36480.1| Myosin phosphatase Rho interacting protein [Homo sapiens]
Length = 1037
Score = 36.3 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 709 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 768
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 769 SAIEAMKNAHREEMERELEKSQRSQISSVNSDV--EALRRQYLEELQSVQRE 818
>gi|58801175|dbj|BAD89507.1| Rho interacting protein [Homo sapiens]
Length = 1036
Score = 36.3 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 708 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 767
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 768 SAIEAMKNAHREEMERELEKSQRSQISSVNSDV--EALRRQYLEELQSVQRE 817
>gi|32140559|dbj|BAC78198.1| Rho-interacting protein 3 [Homo sapiens]
Length = 1037
Score = 36.3 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 709 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 768
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 769 SAIEAMKNAHREEMERELEKSQRSQISSVNSDV--EALRRQYLEELQSVQRE 818
>gi|113205868|ref|NP_001037969.1| syntaxin binding protein 4 [Xenopus (Silurana) tropicalis]
gi|89266711|emb|CAJ83805.1| syntaxin binding protein 4 [Xenopus (Silurana) tropicalis]
Length = 516
Score = 36.3 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 69/189 (36%), Gaps = 24/189 (12%)
Query: 11 DFSRLGSLSDKIVLSETIISNSTADV----TFSSIADFQKEQDKAYQ---------EGYN 57
DF + +LS+ ++ I SN+ D ++E+++AY +
Sbjct: 229 DFKQEMTLSEDRDITSLIDSNANKDSLHPSVSDDPEQLRRERNEAYAELKKLKERLQKSE 288
Query: 58 KAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVI 117
K ++ + + + A + + +++ A + ++ LE EV
Sbjct: 289 KNRSQLSEELENVKQEAKGAIEEARALRNRIHLAEVAQSQASGMETDYEEVIRLLEAEVA 348
Query: 118 RILKSVLD-IGLSRKAAIEF---AAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSS 173
+ +L G ++ + A+V+ L+K + + + E L +++
Sbjct: 349 ELKAQLLKCSGQTKDNVQDLKRRASVLCCQLRKSEMAR-------KAFEVTTEKLQQFAE 401
Query: 174 AVCYENADT 182
VC +D
Sbjct: 402 NVCDIISDD 410
>gi|54022276|ref|YP_116518.1| hypothetical protein nfa3120 [Nocardia farcinica IFM 10152]
gi|54013784|dbj|BAD55154.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 285
Score = 36.3 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 35/122 (28%), Gaps = 4/122 (3%)
Query: 57 NKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEV 116
A R ++ + E+ ++ +A + +
Sbjct: 160 EVAHVLRTGHYTRNIAAALEENRAEMDEMILELIKKDPQAGKVRYIPFHDEIIRLIADTT 219
Query: 117 IRILKSVL----DIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYS 172
RI+ VL L E + ++ G + +GP H + L + +
Sbjct: 220 FRIVFQVLADPRTDELVSDMIRENVEQIRGAVRDGVRVRPSAYGPTPHHETVRYHLDKRA 279
Query: 173 SA 174
+A
Sbjct: 280 TA 281
>gi|299066091|emb|CBJ37272.1| putative two-component sensor histidine kinase transcription
regulator protein [Ralstonia solanacearum CMR15]
Length = 383
Score = 36.3 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 66/206 (32%), Gaps = 28/206 (13%)
Query: 5 VLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSI---ADFQKEQDKAYQEGYNKAIH 61
+ + L F + ++ ++ D ++E+ + E ++
Sbjct: 135 IGALLTIFEEPSASEPAAPEADASPPSAEPDAKRQYAFLMIGQERERKRISAELHDGLGQ 194
Query: 62 DRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILK 121
L + D + H N I++ EL ++ + +R+S L+
Sbjct: 195 ALTLVKLTVEDALIHIHRNNISEAAELLNTAV-----LRIRESIGDLRRICSE-----LR 244
Query: 122 SVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIH---------GPKNLH-SLIEECLGEY 171
L L A A+ + + G +V+ P NL +
Sbjct: 245 PALLDRLGLAA--SLDALCKR--VEQEAGHLVVRFESGVEDEEVPDNLKADIFRITQEAM 300
Query: 172 SSAVCYENADTVEFST-KIFGSVIKT 196
++AV + A + S +I ++ T
Sbjct: 301 NNAVRHGAATEIRLSLRRIESGILLT 326
>gi|307110720|gb|EFN58955.1| hypothetical protein CHLNCDRAFT_49756 [Chlorella variabilis]
Length = 800
Score = 36.3 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 32/89 (35%)
Query: 30 SNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELF 89
+++ + D + + +A Q+ + A+ ++ H+ A L +
Sbjct: 486 ADAVPLDLVQRLHDSFQSRLEALQQQHQAALRRLHQAHEAALALQAEQHERVAAALSDAL 545
Query: 90 ESSTSKAIAIAVRDSFKCFSDSLECEVIR 118
E +A A +RD + D ++
Sbjct: 546 EDPAREAEAALLRDDCRYLKDKIQQLGAE 574
>gi|21740322|emb|CAD39169.1| hypothetical protein [Homo sapiens]
Length = 987
Score = 35.9 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 672 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 731
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 732 SAIEAMKNAHREEMERELEKSQRSQISSVNSDV--EALRRQYLEELQSVQRE 781
>gi|291238096|ref|XP_002738967.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 1326
Score = 35.9 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 41/119 (34%), Gaps = 10/119 (8%)
Query: 70 KNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLS 129
++ +H E+ +L + +S ++ + L + + + L+
Sbjct: 404 DAGYLLEAHARELEELEDRLDSERARQQLALRDKLLERKKRMLADQKRKQEVEMAQELLA 463
Query: 130 RKAAIEFAAVVVDFLKKGDCGKIV----IHGPKNLHSLIEECLGEYSSAVCYENADTVE 184
+K E A V +K + I G +N ++++ L + + ++
Sbjct: 464 QK--KELADVRSKLVKDAEHKAITEGIQEQGTENTETVVKAVLDKRHAQ----EMSDLD 516
>gi|261195714|ref|XP_002624261.1| kinesin-like protein klpA [Ajellomyces dermatitidis SLH14081]
gi|239588133|gb|EEQ70776.1| kinesin-like protein klpA [Ajellomyces dermatitidis SLH14081]
gi|239610378|gb|EEQ87365.1| kinesin motor domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 698
Score = 35.9 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 34/94 (36%), Gaps = 5/94 (5%)
Query: 13 SRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKND 72
SRL S+ + + + D+ D + + +A + I + K +
Sbjct: 144 SRLLSVEKSLKDASRDHEIAIDDLDRQHRIDLETSRQEARNQ-----IEELVARHKEELR 198
Query: 73 FIQRSHDNEIADLRELFESSTSKAIAIAVRDSFK 106
++R DNE+ + R ++ A D +
Sbjct: 199 ELRRRFDNEVENERSKLRQELNQMNAQTSMDIQR 232
>gi|163847691|ref|YP_001635735.1| D-lactate dehydrogenase [Chloroflexus aurantiacus J-10-fl]
gi|222525551|ref|YP_002570022.1| D-lactate dehydrogenase [Chloroflexus sp. Y-400-fl]
gi|163668980|gb|ABY35346.1| D-lactate dehydrogenase (cytochrome) [Chloroflexus aurantiacus
J-10-fl]
gi|222449430|gb|ACM53696.1| D-lactate dehydrogenase (cytochrome) [Chloroflexus sp. Y-400-fl]
Length = 887
Score = 35.9 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 16/146 (10%), Positives = 41/146 (28%), Gaps = 14/146 (9%)
Query: 9 LEDFSRLGSLSDKIV----------LSETIISNSTADVTFSSIADFQKEQDKAYQEGYNK 58
L+ F + + + + L + + ++ +AD Q EG+
Sbjct: 666 LKVFPQPPASATLLAHLSTPTAAWTLIDHLAASRLLPTAVEYLADTQAIVVAMRAEGHPA 725
Query: 59 AIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIR 118
A+ + + HD + LR++ E++ + + +
Sbjct: 726 AV----ERHMREATALAHRHDVSVTVLRDVEETTFWQQTVARYAPIANGVLLRVGVWPAQ 781
Query: 119 ILKSVLDIGLSRKAAIEFAAVVVDFL 144
++ I + L
Sbjct: 782 CATAIQTIEQCAARHQVAIEITAHAL 807
>gi|294635637|ref|ZP_06714113.1| ABC transporter, ATP-binding protein [Edwardsiella tarda ATCC
23685]
gi|291091020|gb|EFE23581.1| ABC transporter, ATP-binding protein [Edwardsiella tarda ATCC
23685]
Length = 636
Score = 35.9 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 44/137 (32%), Gaps = 10/137 (7%)
Query: 6 LSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDREL 65
+ L+ R +L D V+ + + + D +G +
Sbjct: 43 STLLKILGRELALDDGRVVYAQDL--VVSRLQQDPPRDVAGSVFDFVADGVAEQAQQLRD 100
Query: 66 YWK---SKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKS 122
Y + H ++ADL+E E + +RD L E L S
Sbjct: 101 YHELLRKVERDPSEQHLRQLADLQERLEHQGIWRMDTRIRDVLT----KLGLEADAALSS 156
Query: 123 VLDIGLSRKAAIEFAAV 139
L G RKAA+ A V
Sbjct: 157 -LSGGWLRKAALARALV 172
>gi|283856296|ref|YP_162371.2| hypothetical protein ZMO0636 [Zymomonas mobilis subsp. mobilis ZM4]
gi|283775292|gb|AAV89260.2| hypothetical protein ZMO0636 [Zymomonas mobilis subsp. mobilis ZM4]
Length = 253
Score = 35.9 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 42/124 (33%), Gaps = 11/124 (8%)
Query: 22 IVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNE 81
L+E A+ D + + +AY +G+ + + + K + + +
Sbjct: 76 AELTEQEKVEPKAEADLPPPIDIEAIKKEAYDQGFQQGRNSALIEVKEERQAVGQL-ARS 134
Query: 82 IADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVV 141
+ L+ + + A V + + +R+ RK AA++
Sbjct: 135 LEVLKAEPPRALASVFADVVDRLIHQIIGEVSIDAVRL----------RKRVDAVAAMIT 184
Query: 142 DFLK 145
+ +K
Sbjct: 185 EEMK 188
>gi|301789273|ref|XP_002930053.1| PREDICTED: myosin phosphatase Rho-interacting protein-like
[Ailuropoda melanoleuca]
Length = 1038
Score = 35.9 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 710 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 769
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 770 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 819
>gi|195644554|gb|ACG41745.1| sirohydrochlorin ferrochelatase [Zea mays]
gi|195651419|gb|ACG45177.1| sirohydrochlorin ferrochelatase [Zea mays]
Length = 212
Score = 35.9 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 16/149 (10%), Positives = 49/149 (32%), Gaps = 1/149 (0%)
Query: 40 SIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAI 99
+ + + G A+ + + + + + E+ + + + + +
Sbjct: 53 PALGSETSWREDFAVGDKDAVVIVDHGSRRQESNLMLNDFVEMFRAKTSYSIVEAAHMEL 112
Query: 100 AVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKN 159
A F ++ R++ S + R + A+ + K+ ++ P
Sbjct: 113 AEPTIKDAFGKCVQQGASRVIVSPYFLSPGRHWKQDIPALAAEASKEHSNIPYIVTAPLG 172
Query: 160 LHSLIEECLGEYSSA-VCYENADTVEFST 187
LH L+ + + + + + D E +
Sbjct: 173 LHELMVDIMNDRIKYCLRHVAGDVDECTV 201
>gi|238008400|gb|ACR35235.1| unknown [Zea mays]
Length = 166
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 17/149 (11%), Positives = 50/149 (33%), Gaps = 1/149 (0%)
Query: 40 SIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAI 99
+ + + G A+ + + + + + E+ + + + + +
Sbjct: 7 PALGSETSWREDFAVGDKDAVVIVDHGSRRQESNLMLNDFVEMFRAKTSYSIVEAAHMEL 66
Query: 100 AVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKN 159
A F ++ V R++ S + R + A+ + K+ ++ P
Sbjct: 67 AEPTIKDAFGKCVQQGVSRVIVSPYFLSPGRHWKQDIPALAAEASKEHSNIPYIVTAPLG 126
Query: 160 LHSLIEECLGEYSSA-VCYENADTVEFST 187
LH L+ + + + + + D E +
Sbjct: 127 LHELMVDIMNDRIKYCLRHVAGDVDECTV 155
>gi|170097760|ref|XP_001880099.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644537|gb|EDR08786.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 886
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 8/89 (8%)
Query: 120 LKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIE-ECLGEYSSAVCYE 178
++ L K A FA + + + G I + +L S+I + Y
Sbjct: 726 IRPKLFDLDQEKLARLFADLRRESMATGSY-PITVR---HLESMIRMAEASAKMALREYV 781
Query: 179 NADTVEFSTKIFGSVIKTRLESWLSDVKA 207
AD ++ + ++ + S +K
Sbjct: 782 RADDIDLAIEVAVGSFV---SAQKSSIKK 807
>gi|29829349|ref|NP_823983.1| hypothetical protein SAV_2807 [Streptomyces avermitilis MA-4680]
gi|29606456|dbj|BAC70518.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 775
Score = 35.6 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 5/144 (3%)
Query: 14 RLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEG-----YNKAIHDRELYWK 68
R + +D +L E D ++AD ++ AY +G Y ++ E +
Sbjct: 446 RAWTTADVPLLDEAAELLGEDDRLARALADRERNTQVAYAQGVLDVSYASRTYEFEDKDE 505
Query: 69 SKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGL 128
++ + H + E E ++ A + + + L + L
Sbjct: 506 EDSEVLSAHHIIDAERFAERHEEEDHRSAAERAAADRTWAFGHIIVDEAQELSPMAWRLL 565
Query: 129 SRKAAIEFAAVVVDFLKKGDCGKI 152
R++ +V D + + +
Sbjct: 566 MRRSPTRSMTLVGDPAQTAEAAGV 589
>gi|221487106|gb|EEE25352.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 885
Score = 35.6 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 49 DKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCF 108
+ Q + + WK + D +++ H ++ L+E ++ ++A A + +
Sbjct: 479 RNSRQRQQEARMDELAKKWKQETDELEQRHREQVQRLQE-WQQERARAQAEQLSERQDEE 537
Query: 109 SDSLECEVIRILKSVL 124
+L+ + LK++L
Sbjct: 538 WKTLKTKQSSDLKAIL 553
>gi|197119826|ref|YP_002140253.1| HAMP domain-containing sensor histidine kinase [Geobacter
bemidjiensis Bem]
gi|197089186|gb|ACH40457.1| sensor histidine kinase, HAMP domain-containing protein [Geobacter
bemidjiensis Bem]
Length = 482
Score = 35.6 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 9/126 (7%)
Query: 39 SSIADFQKEQD-KAYQEGYNKAIHDRELYWKSKNDFI----QRSHDNEIADLRELFESST 93
+ KE+ +AY+E A+ + + + + S++N++ R E
Sbjct: 281 QTEIALSKERTPEAYREVLASALEEYTQLSLTIDRLLFLARADSNNNDLLLQRLAAEGEA 340
Query: 94 SKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIV 153
S+ I + +LEC ++ + D L R+A + + G +
Sbjct: 341 SEVI-DYFSEEAAEAGITLECRGAAVIAA--DRTLFRRALSNLVSNAISHTPSGGVVSVT 397
Query: 154 IHGPKN 159
I P+N
Sbjct: 398 IR-PRN 402
>gi|238919294|ref|YP_002932809.1| ABC transporter ATPase component [Edwardsiella ictaluri 93-146]
gi|238868863|gb|ACR68574.1| ABC transporter ATP-binding protein uup [Edwardsiella ictaluri
93-146]
Length = 637
Score = 35.6 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 36/131 (27%), Gaps = 5/131 (3%)
Query: 6 LSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDREL 65
+ L+ R +L D V+ + + + D G +
Sbjct: 43 STLLKILGREQALDDGRVVYAQDL--VVSRLQQDPPRDVAGSVFDFVAGGVAEQAQHLRD 100
Query: 66 YWK---SKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKS 122
Y + H ++A+L+E E + +RD + + +
Sbjct: 101 YHELLRKVERDPSEQHLRQLAELQERLEHQGIWRMDARIRDVLTKLGLEADSPLSALSGG 160
Query: 123 VLDIGLSRKAA 133
L +A
Sbjct: 161 WLRKAALARAL 171
>gi|318060756|ref|ZP_07979479.1| bifunctional sensor kinase/response regulator [Streptomyces sp.
SA3_actG]
Length = 638
Score = 35.6 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 34/167 (20%)
Query: 21 KIVLSETIISNSTADVTFSSIADFQK--------EQDKAYQE---GYNKAIHDRELYWKS 69
VL D+T + + D + +AY+E + + S
Sbjct: 212 GQVLWNKKGEKVPVDLTTAPVRDGDQLVGAVMTFTDRRAYEELVERHAAESGELRESHAS 271
Query: 70 KNDFIQRSHDNEIADLRELFESSTSKAIA---IAVRDSFKCFSDSLECEVIRILKSVLDI 126
+ ++ +H E+A L E +E+ ++ A AV + ++ E E R
Sbjct: 272 EIAGLRETHGAEVAGLTEGYEARIAELEARHEEAVAQAQDRYAALAEREKDRF------E 325
Query: 127 GLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSS 173
L+ + + AV+ L GP + LG ++
Sbjct: 326 ALAARH-EQLLAVLETSL----------RGPL---DELRRELGTLAA 358
>gi|154282207|ref|XP_001541916.1| hypothetical protein HCAG_04014 [Ajellomyces capsulatus NAm1]
gi|150412095|gb|EDN07483.1| hypothetical protein HCAG_04014 [Ajellomyces capsulatus NAm1]
Length = 801
Score = 35.6 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 23/143 (16%)
Query: 13 SRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKND 72
SRL ++ + + + D+ D + + +A +K I + + K +
Sbjct: 247 SRLLTIENNLKDVSRDHEIAIDDLERQHRIDLEASRQEA-----SKRIEELAVKHKEEMR 301
Query: 73 FIQRSHDNEIADLRELFESSTSKAIA-----------------IAVRDSFKCFSDSLEC- 114
++ DNEI + R ++ A +RD + L
Sbjct: 302 ELRSRFDNEIENERNKLRQELNQINAQTAIDLQRSQIEMENRNRELRDIQAEVNRLLSDL 361
Query: 115 EVIRILKSVLDIGLSRKAAIEFA 137
+ R L L + R A+ A
Sbjct: 362 DRERTLNKELQHNMVRNASNTMA 384
>gi|116793148|gb|ABK26629.1| unknown [Picea sitchensis]
Length = 327
Score = 35.6 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 4/63 (6%), Positives = 27/63 (42%)
Query: 53 QEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSL 112
+ + + E +K + ++++H ++ L+ + ++ ++ ++ + + +
Sbjct: 220 AKAHAAKLEQMEKAHAAKVEQMEKAHAEQLKQLQGQMAKAHAEQLSKDIQQLQEQMAKTH 279
Query: 113 ECE 115
+
Sbjct: 280 AEQ 282
>gi|260833126|ref|XP_002611508.1| hypothetical protein BRAFLDRAFT_63857 [Branchiostoma floridae]
gi|229296879|gb|EEN67518.1| hypothetical protein BRAFLDRAFT_63857 [Branchiostoma floridae]
Length = 2132
Score = 35.6 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 21/59 (35%)
Query: 36 VTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTS 94
+ +AD K Q +E + A + E + ++ EI +L+ +
Sbjct: 1852 LEVEILADGHKNQLLEIREAHQAATRELEQKHAEEIHKLEALQTQEIEELKRQHQEQIG 1910
>gi|318081367|ref|ZP_07988699.1| bifunctional sensor kinase/response regulator [Streptomyces sp.
SA3_actF]
Length = 622
Score = 35.6 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 34/167 (20%)
Query: 21 KIVLSETIISNSTADVTFSSIADFQK--------EQDKAYQE---GYNKAIHDRELYWKS 69
VL D+T + + D + +AY+E + + S
Sbjct: 212 GQVLWNKKGEKVPVDLTTAPVRDGDQLVGAVMTFTDRRAYEELVERHAAESGELRESHAS 271
Query: 70 KNDFIQRSHDNEIADLRELFESSTSKAIA---IAVRDSFKCFSDSLECEVIRILKSVLDI 126
+ ++ +H E+A L E +E+ ++ A AV + ++ E E R
Sbjct: 272 EIAGLRETHGAEVAGLTEGYEARIAELEARHEEAVAQAQDRYAALAEREKDRF------E 325
Query: 127 GLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSS 173
L+ + + AV+ L GP + LG ++
Sbjct: 326 ALAARH-EQLLAVLETSL----------RGPL---DELRRELGTLAA 358
>gi|121596092|ref|YP_987988.1| flagellar assembly protein FliH [Acidovorax sp. JS42]
gi|120608172|gb|ABM43912.1| flagellar assembly protein FliH [Acidovorax sp. JS42]
Length = 244
Score = 35.6 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 50/173 (28%), Gaps = 20/173 (11%)
Query: 11 DFSRLGSLSDKIVLSETIISNSTADVTFSSIAD-------FQKEQDKAYQEGYNKAIHDR 63
+F + L+ D Q+ +++ Y +G +
Sbjct: 24 EFGDVEFPPGSQPLAPEPPVLEPEAAPVEPGIDEAQHQALVQQAREEGYAQGLAEGQEQT 83
Query: 64 ELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRI---L 120
L W+ + D E A +A A+ +SF + EV+++ +
Sbjct: 84 RLQWQQRMDDYVAGQGREGA--------ERLARLAQALEESFTGMQQGMAQEVLQLACDI 135
Query: 121 KSVLDIGLSRKAAIEFAAVVVDF--LKKGDCGKIVIHGPKNLHSLIEECLGEY 171
+ + VV + + + + + +E+ L E
Sbjct: 136 ARQVVRQEVAGNSQAVLPVVREALGMLVSEARPATVRLNPGDWAALEQPLREE 188
>gi|294505928|ref|YP_003569986.1| two-component system sensor histidine kinase/response regulator,
hybrid ('one co [Salinibacter ruber M8]
gi|294342256|emb|CBH23034.1| two-component system sensor histidine kinase/response regulator,
hybrid ('one co [Salinibacter ruber M8]
Length = 1392
Score = 35.2 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 50/170 (29%), Gaps = 17/170 (10%)
Query: 24 LSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDF--IQRSHDNE 81
+E + AD + D ++ + + + A +S+ I D E
Sbjct: 1227 DAEVEGLKTGADDYVTKPFDAEELRQRI--ANHLAARDHLRERHRSEVRVEPIAAVVDEE 1284
Query: 82 --------IADLRELFESS--TSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRK 131
I +RE T IA AV S + + L+ V + + L +
Sbjct: 1285 DLPFVEEVIEAVRERLSDPGLTVSQIADAVALSRRQLTRRLKDAVGQTPAAFLRERRIER 1344
Query: 132 AAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEY-SSAVCYENA 180
A A + P + E +G S V E A
Sbjct: 1345 AKELLAE--APETIAEVAYAVGFRSPSSFSKTFREQVGHTPSEYVDQEEA 1392
>gi|194217787|ref|XP_001488576.2| PREDICTED: similar to myosin phosphatase-Rho interacting protein
[Equus caballus]
Length = 1007
Score = 35.2 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 15/110 (13%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAV 101
++++ +EGY +A +R E + K + +QR H E+ LRE + ++ A +
Sbjct: 679 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 738
Query: 102 RDSF-------KCFSDSLECEVIRILKSVLD--IGLSRKAAIEFAAVVVD 142
+ LE + SV L R+ E +V +
Sbjct: 739 SAIEAMKNAHREEMERELEKSQRSQISSVNSDIEALRRQYLEELQSVQRE 788
>gi|328722974|ref|XP_001947049.2| PREDICTED: hypothetical protein LOC100166575 [Acyrthosiphon pisum]
Length = 504
Score = 35.2 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 69/191 (36%), Gaps = 8/191 (4%)
Query: 21 KIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDN 80
K + + +V A+ +KE +A+ + N L KSK +N
Sbjct: 142 KTADKDINQISMELEVNKRHSANLEKELQEAHIQLRNAQDVMFRLKEKSKTRDSVTGENN 201
Query: 81 EIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVV 140
++D + E+ + + + + L L++ L+ V
Sbjct: 202 LVSDNNLVHENQILQNEISTLLKIIEVNELRINDLTSEKLN--LEMALNNIQFENKNTVK 259
Query: 141 VDFL--KKGDCGKIVIHGPKNLHSL---IEECLGEYSSAVCYENADTVEFST-KIFGSVI 194
+ L +C + NL+++ ++ECL + AD ST ++ S I
Sbjct: 260 KEILTNLSNECNTMTTFTKTNLNNVALKLKECLNDLEIVNRQATADQGALSTSELERSDI 319
Query: 195 KTRLESWLSDV 205
T+L + S++
Sbjct: 320 LTKLNAMKSNL 330
>gi|163744331|ref|ZP_02151691.1| FlbE protein [Oceanibulbus indolifex HEL-45]
gi|161381149|gb|EDQ05558.1| FlbE protein [Oceanibulbus indolifex HEL-45]
Length = 218
Score = 35.2 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 15/156 (9%), Positives = 46/156 (29%), Gaps = 21/156 (13%)
Query: 26 ETIISNSTADVTFSSIADFQKEQDKAYQEGY--------NKAIHDRELYWKSKNDFIQRS 77
+ + D + + + + KA+++G+ + + ++++ +
Sbjct: 11 DEDGKSKPQDPAMPTPEEIEAKIKKAHKQGHIEGYLTGADAGRAEMHQTMQAEHAVMAEK 70
Query: 78 HDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLS-RKAAIEF 136
E+A L + ++ +A V + I+ + LS +
Sbjct: 71 LAQELARLSQAMQAHQEALVAQIVG---------FTLQTCEIVLPEVIERLSTARVKKTV 121
Query: 137 AAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYS 172
+ + I + I L + +
Sbjct: 122 TQSLKMAI---GSSHIKVRLSPATLEQIGPELRQRA 154
>gi|260752866|ref|YP_003225759.1| hypothetical protein Za10_0627 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552229|gb|ACV75175.1| hypothetical protein Za10_0627 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 253
Score = 35.2 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 42/124 (33%), Gaps = 11/124 (8%)
Query: 22 IVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNE 81
L+E A+ D + + +AY +G+ + + + K + + +
Sbjct: 76 AELTEQEKVEPKAEADLPPPIDIEAIKKEAYDQGFQQGRNSALIEVKEERQAVGQL-ARS 134
Query: 82 IADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVV 141
+ L+ + + A V + + +R+ RK AA++
Sbjct: 135 LEVLKAEPPRALASVFADVVDRLIHQIIGEVSIDAVRL----------RKRVDAVAAMIT 184
Query: 142 DFLK 145
+ +K
Sbjct: 185 EEMK 188
>gi|224046445|ref|XP_002198373.1| PREDICTED: leucine rich repeat and coiled-coil domain containing 1
[Taeniopygia guttata]
Length = 1024
Score = 35.2 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 5/164 (3%)
Query: 35 DVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKS--KNDFIQRSHDNEIADLRELFESS 92
+ F + ++ K ++G+ KA D + + + + ++ + I DL L E
Sbjct: 629 EDEFRLALTIEAKRFKEVKQGFEKASADLAEHKQDLFELEQREKEMASLIQDLTNLVEEQ 688
Query: 93 TSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKI 152
+K + S + + +L+C + + + V + + +
Sbjct: 689 KAKI--AELTKSNEEATANLKCRTGELETVIEEDKQKAVQVELLKKENVKLISQLTAQES 746
Query: 153 VIHGPKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKT 196
VI G K + + L E + + ++ +E ++ + I T
Sbjct: 747 VIDGLKMERKIWGQELAEQGAHLA-QDRGKLEAKIEVLTNEIVT 789
>gi|296141545|ref|YP_003648788.1| DNA polymerase III subunit delta' [Tsukamurella paurometabola DSM
20162]
gi|296029679|gb|ADG80449.1| DNA polymerase III, delta prime subunit [Tsukamurella paurometabola
DSM 20162]
Length = 406
Score = 35.2 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 11/122 (9%)
Query: 45 QKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIA---- 100
QK++ +A + + + ADL E A+
Sbjct: 229 QKQRRQALSVARAATSEGVYGVVEQLLRDAESAAKEINADLNERETEELKTALGAGGTGR 288
Query: 101 -----VRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIH 155
+R S D + + R +SV D +A I+ AA+ D L +G ++ +
Sbjct: 289 GTAGVMRGSAGQLKDLEKRQKARSTRSVRDAL--DRALIDLAALFRDALVQGSGAQVTLM 346
Query: 156 GP 157
P
Sbjct: 347 HP 348
>gi|262201932|ref|YP_003273140.1| MaoC domain-containing protein dehydratase [Gordonia bronchialis DSM
43247]
gi|262085279|gb|ACY21247.1| MaoC domain protein dehydratase [Gordonia bronchialis DSM 43247]
Length = 3083
Score = 35.2 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 14/128 (10%), Positives = 32/128 (25%), Gaps = 3/128 (2%)
Query: 3 DAVLSRLEDFSRL---GSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKA 59
D R ED L + + + S + A
Sbjct: 1915 DGASVRGEDLGNLLDGPVTGPDALDALIDRAVSAVGAVKGIAVSLPAAESGGGATVDAAA 1974
Query: 60 IHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRI 119
+ + ++ + + + L + T++A+ + S L + R
Sbjct: 1975 LGEFTEQITGRSGALASAAYTVLEKLGLAEIAETAEAVTDENALLAERVSAELGSDWART 2034
Query: 120 LKSVLDIG 127
+ D
Sbjct: 2035 VAPAFDEA 2042
>gi|4379034|emb|CAA33634.1| unnamed protein product [Homo sapiens]
Length = 264
Score = 35.2 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 44/137 (32%), Gaps = 9/137 (6%)
Query: 4 AVLSRLEDFSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDR 63
A+ + + L L + +T++ + + G A
Sbjct: 108 ALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEA-GRAGAAPVA 166
Query: 64 ELYWKSKNDFIQRSHD---NEIADLRELFESSTSKA--IAIAVRDS--FKCFSDSLECEV 116
++ +QR H E+ R L E ++A + +R+S + + E
Sbjct: 167 PEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEA 226
Query: 117 IRILKSV-LDIGLSRKA 132
R L ++ L +A
Sbjct: 227 RRQLAALGQTEQLPAEA 243
>gi|296418300|ref|XP_002838779.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634741|emb|CAZ82970.1| unnamed protein product [Tuber melanosporum]
Length = 418
Score = 35.2 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 54/168 (32%), Gaps = 14/168 (8%)
Query: 43 DFQKEQDKAYQEGYNKAIHDR--ELYWKSKNDFIQRSH-DNEIADLRELFESSTSKAIAI 99
D +EQ +A+Q + D+ + + + + + + E RE + S +I+
Sbjct: 227 DLDEEQKEAFQATLDALQKDKEETERYSQELEARKEAEWEKEEQAERERQKRELSPSIST 286
Query: 100 A---VRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHG 156
R S + + + +R + + RK A + + G
Sbjct: 287 RPTPRRQSVQGRAKRSKAGSVRGDSPT-EEKMMRKQARTRSEDTRGAISAR--GGSTNKN 343
Query: 157 PKNLHSLIEECLGEYSSAVCYENADTVEFSTKIFGSVIKTRLESWLSD 204
+L S L S V + T VI + W++
Sbjct: 344 TTSLFSTTTALLNRLQSQVHTARGRFMLLRT-----VIMLAMVVWMTS 386
>gi|240276075|gb|EER39588.1| kinesin motor domain-containing protein [Ajellomyces capsulatus
H143]
Length = 801
Score = 35.2 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 8/102 (7%)
Query: 13 SRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKND 72
SRL ++ + + + D+ D + +A +K I + + K +
Sbjct: 247 SRLLTIENNLKDVSRDHEIAIDDLERQHRIDLDASRQEA-----SKRIEELAVKHKEEMR 301
Query: 73 FIQRSHDNEIADLRELFESSTSKA---IAIAVRDSFKCFSDS 111
++ DNEI + R ++ AI ++ S +
Sbjct: 302 ELRSRFDNEIENERNRLRQELNQINSQTAIDLQRSQIEMENR 343
>gi|56205310|emb|CAI24302.1| myosin phosphatase Rho interacting protein [Mus musculus]
Length = 2269
Score = 35.2 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 20/112 (17%)
Query: 49 DKAYQEGYN--KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
+ YQ + KA +R E + K + +QR H E+ LRE L T+ I
Sbjct: 1941 QEKYQRDFESLKATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 2000
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 2001 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 2050
>gi|89895740|ref|YP_519227.1| hypothetical protein DSY2994 [Desulfitobacterium hafniense Y51]
gi|89335188|dbj|BAE84783.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 721
Score = 35.2 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 53/142 (37%), Gaps = 11/142 (7%)
Query: 42 ADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSK-AIAIA 100
+ +E+ A + + Y + + I S D + DL ++E + S+ +
Sbjct: 457 IETPEERRAAGKP--EVGTITLDAYHEGNHIAILISDDGKGLDLNRIYEKALSRGLVGER 514
Query: 101 VRDSFKCFSDSLECEVIRILKSVLDIG-------LSRKAAIEFAAVVVDFLKKGDCGKIV 153
S + ++ + + V DI + +KA ++ ++G
Sbjct: 515 EGLSERDIANLIFLPGFSTVDKVTDISGRGVGMDVVKKALNNLGGMIDITTRQGQGTTFT 574
Query: 154 IHGPKNLHSLIEECLGEYSSAV 175
I P L ++I+ L E S+ +
Sbjct: 575 IRLPLTL-AIIQALLVEASTEI 595
>gi|254442551|ref|ZP_05056027.1| magnesium transporter [Verrucomicrobiae bacterium DG1235]
gi|198256859|gb|EDY81167.1| magnesium transporter [Verrucomicrobiae bacterium DG1235]
Length = 446
Score = 35.2 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 12/109 (11%), Positives = 40/109 (36%), Gaps = 5/109 (4%)
Query: 68 KSKNDFIQRSHDNEIADLRELFESSTSKAIAIA-VRDSFKCFSDSLECEVIRILKS---- 122
+ K + + D ++ L+E+ S ++ + + + + + + +V IL
Sbjct: 5 EEKIQTVSNAFDRDLNRLKEMHPSDIAEELEDRELSEIRQVLREFGDEQVADILTELPQE 64
Query: 123 VLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEY 171
+ L + ++ + + P+ L ++++ E+
Sbjct: 65 IQTDLLENMRLDRVSEIIPEMYSDDAADALGQVSPERLQDIMDQLPDEH 113
>gi|171319018|ref|ZP_02908145.1| hypothetical protein BamMEX5DRAFT_3499 [Burkholderia ambifaria
MEX-5]
gi|171095773|gb|EDT40726.1| hypothetical protein BamMEX5DRAFT_3499 [Burkholderia ambifaria
MEX-5]
Length = 211
Score = 35.2 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 8/96 (8%)
Query: 22 IVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNE 81
+ + A A + + Y +G +A ++ + F+ R+H
Sbjct: 33 AIDLRAHLETELAQAQLDRQASVDGARREGYAQGEREAQIAVSESVQNAHGFLARAH--- 89
Query: 82 IADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVI 117
+FE+ ++ +A AV D + + +
Sbjct: 90 -----SMFEAQFARFVAEAVERIVDPLPDPIRMQAV 120
>gi|302833904|ref|XP_002948515.1| hypothetical protein VOLCADRAFT_116912 [Volvox carteri f.
nagariensis]
gi|300266202|gb|EFJ50390.1| hypothetical protein VOLCADRAFT_116912 [Volvox carteri f.
nagariensis]
Length = 1652
Score = 35.2 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 27/68 (39%)
Query: 51 AYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSD 110
A + + + + ++ ++ +H ++ LRE +E + + A A+
Sbjct: 797 ALRSSHAAEVAALSVLHTAELAAVKAAHAVQVEALREAYEENVRQLKAKALESRVAALHR 856
Query: 111 SLECEVIR 118
+ + + R
Sbjct: 857 AFKEKAAR 864
>gi|294630232|ref|ZP_06708792.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292833565|gb|EFF91914.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 677
Score = 35.2 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 28/77 (36%), Gaps = 6/77 (7%)
Query: 41 IADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTS------ 94
D ++ A ++ + + + S+ +++ H EI +L E +
Sbjct: 287 PYDALADEKAAAEKRHEEELERLAEEHGSELTALRQRHVAEIEELTERHAEELAANEERY 346
Query: 95 KAIAIAVRDSFKCFSDS 111
A+ +D ++ +
Sbjct: 347 AALGEREKDRYEALAAR 363
>gi|56205309|emb|CAI24301.1| myosin phosphatase Rho interacting protein [Mus musculus]
Length = 1010
Score = 35.2 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 48 QDKAYQEGYN-KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
++++ +EGY +A +R E + K + +QR H E+ LRE L T+ I
Sbjct: 695 REQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 754
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ I + L R+ E +V +
Sbjct: 755 SAIEAMKNAHREEMERELEKSQRSQISSINSDI--EALRRQYLEELQSVQRE 804
>gi|325093433|gb|EGC46743.1| kinesin motor domain-containing protein [Ajellomyces capsulatus
H88]
Length = 801
Score = 34.8 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 8/102 (7%)
Query: 13 SRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKND 72
SRL ++ + + + D+ D + +A +K I + + K +
Sbjct: 247 SRLLTIENNLKDVSRDHEIAIDDLERQHRIDLDASRQEA-----SKRIEELAVKHKEEMR 301
Query: 73 FIQRSHDNEIADLRELFESSTSKA---IAIAVRDSFKCFSDS 111
++ DNEI + R ++ AI ++ S +
Sbjct: 302 ELRSRFDNEIENERNRLRQELNQINSQTAIDLQRSQIEMENR 343
>gi|159116626|ref|XP_001708534.1| SMC4-like protein [Giardia lamblia ATCC 50803]
gi|157436646|gb|EDO80860.1| SMC4-like protein [Giardia lamblia ATCC 50803]
Length = 1435
Score = 34.8 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 57/157 (36%), Gaps = 6/157 (3%)
Query: 63 RELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCF--SDSLECEVIRIL 120
+ N + + +A E++ AI + F + L + L
Sbjct: 761 IHEKLEGLNSEL-ETCRRALAQTTLSEEAAAKSAITAKITAFQDEFSKARELIFRALSSL 819
Query: 121 KSVLDIGLSRKAAIEFAAVVVDFLKK--GDCGKIVIHGPKNLHSLIEECLGEYSSAVCYE 178
+S + K+AIE A+V + + + + G ++ + + +G + +
Sbjct: 820 RSSFASSVLAKSAIEITALVRNEVSDLYHALEEQDVSGCGDIENALHNLMGLCPTLLSIS 879
Query: 179 NADTVEFSTKIFGSVIKTRLESWLSDVKAKIVSQQVS 215
DT+ I +++ T + L +K ++ +S
Sbjct: 880 E-DTLSEFPDIGPALLSTSMSHHLKSLKNSALASILS 915
>gi|159473284|ref|XP_001694769.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276581|gb|EDP02353.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1739
Score = 34.8 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 34 ADVTFSSIADFQKEQDKAYQEGYNKAI-------HDRELYWKSKNDFIQRSHDNEIADLR 86
AD+ + +KE K Y+E + A D E W+ + + ++++HD +I LR
Sbjct: 1437 ADLRLEHLEQARKEDKKRYEEALSSAREAAEARQRDMEEDWRREKEALRKAHDKQIESLR 1496
Query: 87 ELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILK 121
E +E+ A + K ++ + ++L+
Sbjct: 1497 EQYETGQEGWRAAMAERARKEVAERVAAIREKLLE 1531
>gi|149048118|gb|EDM00694.1| rCG62592, isoform CRA_a [Rattus norvegicus]
Length = 1030
Score = 34.8 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 50/157 (31%), Gaps = 11/157 (7%)
Query: 12 FSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKN 71
+ L L +V E ++ + + G ++
Sbjct: 790 YGLLQGLQAVVVQQERLMEALFPEGPERWEKLSRANSRDGEA-GRAAVASVTPEKQATEL 848
Query: 72 DFIQRSHDNEIADLR---ELFESSTSKA--IAIAVRDS--FKCFSDSLECEVIRILKSV- 123
+QR H +LR L E ++A + +R+S + + E+ R L ++
Sbjct: 849 ALLQRQHSLLQEELRRCQRLGEERATEAGSLEARLRESEQARALLEREAEEIRRQLAALG 908
Query: 124 LDIGLSRKA--AIEFAAVVVDFLKKGDCGKIVIHGPK 158
+ L +A A L GD + + P+
Sbjct: 909 QNEPLPAEAPWARRPLDPRRRSLPAGDALYLSFNPPQ 945
>gi|153816538|ref|ZP_01969206.1| hypothetical protein RUMTOR_02791 [Ruminococcus torques ATCC 27756]
gi|331088737|ref|ZP_08337647.1| hypothetical protein HMPREF1025_01230 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846130|gb|EDK23048.1| hypothetical protein RUMTOR_02791 [Ruminococcus torques ATCC 27756]
gi|330407260|gb|EGG86763.1| hypothetical protein HMPREF1025_01230 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 317
Score = 34.8 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 33/84 (39%)
Query: 36 VTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSK 95
+ D + ++++A ++G + + + R + ++L + T
Sbjct: 233 DEYDYETDIEVQREEAREQGREEGRKQGREEGRKQGREEGRKAERSTLIQKKLEKGKTIS 292
Query: 96 AIAIAVRDSFKCFSDSLECEVIRI 119
IA + D+ + + +E +RI
Sbjct: 293 QIADELEDTEENIACLIEQFHLRI 316
>gi|226294393|gb|EEH49813.1| myosin-2 [Paracoccidioides brasiliensis Pb18]
Length = 1573
Score = 34.8 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 55/148 (37%), Gaps = 9/148 (6%)
Query: 44 FQKEQDKAYQEGYNKAIHDRELY-WKSKNDFIQRSHDNEIADLRELFESSTSKA--IAIA 100
+ + E I +L + + +Q++H +A ++ L E + + A
Sbjct: 981 LEARTRELQAEANQAGISAAQLTALEEEMAKLQQNHSEALATVKRLQEEEKAARESLKSA 1040
Query: 101 VRDSFKCFSDSLECE-----VIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIH 155
+ + K + + E + + + + D K ++ V D L+ G + ++
Sbjct: 1041 IAELEKLRQANEDHELDKDSLRQQISELQDELELAKRSVPVNGVNGD-LQNGTGSQPLVS 1099
Query: 156 GPKNLHSLIEECLGEYSSAVCYENADTV 183
G NL S + S+ ++D +
Sbjct: 1100 GLINLVSSKKPKPKRRSAGAERIDSDRL 1127
>gi|46446362|ref|YP_007727.1| endopeptidase Clp ATP-binding chain [Candidatus Protochlamydia
amoebophila UWE25]
gi|54035763|sp|Q6MD97|CLPB_PARUW RecName: Full=Chaperone protein ClpB
gi|46400003|emb|CAF23452.1| probable endopeptidase Clp ATP-binding chain [Candidatus
Protochlamydia amoebophila UWE25]
Length = 868
Score = 34.8 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 49/146 (33%), Gaps = 21/146 (14%)
Query: 24 LSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHD----RELYWKSKNDFIQRSHD 79
L+ I+ + +A + E+ EG I + W + I+ +
Sbjct: 419 LAGLIVEQEAMKRESTPLAKNEVEK----LEGRIAQIKEELKILREQWDQEKKIIESLKE 474
Query: 80 NEIADLRELFESSTSKAIAI-------------AVRDSFKCFSDSLECEVIRILKSVLDI 126
+ + FE ++ A ++ + L + R+L+ +D
Sbjct: 475 KKDKLEKLRFEEEAAERKADYNRVAELRYNLIPQLQKEIEEAQTQLNNKPNRLLQEEVDE 534
Query: 127 GLSRKAAIEFAAVVVDFLKKGDCGKI 152
L + ++ + V + +G+ ++
Sbjct: 535 SLIAQIVSKWTGIPVHKMLEGEAERL 560
>gi|169618595|ref|XP_001802711.1| hypothetical protein SNOG_12489 [Phaeosphaeria nodorum SN15]
gi|111059182|gb|EAT80302.1| hypothetical protein SNOG_12489 [Phaeosphaeria nodorum SN15]
Length = 1299
Score = 34.8 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 55/187 (29%), Gaps = 17/187 (9%)
Query: 5 VLSRLEDFSRLGSLSDKIVLSETIISNSTADVT-----FSSIADFQKEQDKAYQEGYNKA 59
+L + D ++S +I + ++ D ++ A G +
Sbjct: 862 LLQYIMDNGHSDTVSVAQSQIPQLIGSGGREMEQLRLETGCQIDVPGAREGADPSGRAEI 921
Query: 60 IHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRI 119
I D T + R+
Sbjct: 922 KLKGTKKAVEDAKKILLQRAKVFDDTT----VETLEVDRKHHRNLIG--------GSGSN 969
Query: 120 LKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYEN 179
++S++ A + A +V + D I + GPK++ I L ++++ +
Sbjct: 970 IRSIVTAAGGPDNARDLARMVRFPRAESDETAIRVEGPKSVVEKIIASLKAQAASLENQT 1029
Query: 180 ADTVEFS 186
+T+E S
Sbjct: 1030 TETIEIS 1036
>gi|241761172|ref|ZP_04759261.1| hypothetical protein ZmobDRAFT_0338 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241374791|gb|EER64252.1| hypothetical protein ZmobDRAFT_0338 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 253
Score = 34.8 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 42/124 (33%), Gaps = 11/124 (8%)
Query: 22 IVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNE 81
L+E A+ D + + +AY +G+ + + + K + + +
Sbjct: 76 AELTEQEKVEPKAEADLPPPIDIEAIKKEAYDQGFQQGRNSALIEVKEERQAVGQL-ARS 134
Query: 82 IADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVV 141
+ L+ + + A V + + +R+ RK AA++
Sbjct: 135 LEVLKAEPPRALASVFADVVDRLIHQIIGEVSIDAVRL----------RKRVDAVAAMIP 184
Query: 142 DFLK 145
+ +K
Sbjct: 185 EEMK 188
>gi|224826631|ref|ZP_03699732.1| flagellar assembly protein FliH [Lutiella nitroferrum 2002]
gi|224601232|gb|EEG07414.1| flagellar assembly protein FliH [Lutiella nitroferrum 2002]
Length = 261
Score = 34.8 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 42/133 (31%), Gaps = 10/133 (7%)
Query: 19 SDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRS- 77
D + E ++ ++ + A+ + +A+Q G+ + + + + + +
Sbjct: 57 PDPVAEGEADPADEVPASSYPTAAELEAIHQEAWQTGHEAGLAEG--RQQGHAEALAEAS 114
Query: 78 -----HDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILK--SVLDIGLSR 130
H + L + F ++ A D E V L L R
Sbjct: 115 TAFARHWEPLQALADQFAEGLNRIEADMAHDLLSFSVGLAERLVAAHLACDPCAIESLLR 174
Query: 131 KAAIEFAAVVVDF 143
+A + A +
Sbjct: 175 QAMSDLPASLGQA 187
>gi|301614307|ref|XP_002936637.1| PREDICTED: ninein [Xenopus (Silurana) tropicalis]
Length = 2257
Score = 34.8 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 57/184 (30%), Gaps = 33/184 (17%)
Query: 25 SETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNE--- 81
ET +D+ F DF+ A + + +A+ E ++S + H E
Sbjct: 992 METEYDKRISDMEFRFSKDFE-----ATMKNHEEALAKLEDKYQSNLRDLTDKHTEEKSQ 1046
Query: 82 ---------------IADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDI 126
LRE E +A + +++ E +++
Sbjct: 1047 WEFEKEEIIQDGLEAQERLRERLEKDKFEACSALIQEKVHLEKTYKEYINNLVVEKEQVE 1106
Query: 127 GLSRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEECLGEYSSAVCYENADTVEFS 186
+ ++V+ K+ I L + ++E L E +C + + +
Sbjct: 1107 K-------DLENLMVNSKKEESQLSAKI---SQLENDLQEELTERDEQLCQAEKNLLVLT 1156
Query: 187 TKIF 190
I
Sbjct: 1157 ETIG 1160
>gi|324500791|gb|ADY40362.1| Unknown [Ascaris suum]
Length = 947
Score = 34.8 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 13/131 (9%)
Query: 45 QKEQD-KAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRD 103
E+ + E Y +A+ + + R+H EI +++ +E + D
Sbjct: 600 DLERRLSSLVEKYERAVSVLGSEHSRHLENVARTHQEEINSIQQRYEKQLA--------D 651
Query: 104 SFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAV-VVDFLKKGDCGKIVIHGPKNLHS 162
+ + +LE + R + LSR I+ A + + ++ + K L +
Sbjct: 652 TKEEMKQALEEQ--RCIHEAEIERLSRTHQIQIATLDSKLGEAEKQAVQL-VRDKKALEA 708
Query: 163 LIEECLGEYSS 173
+ + E +
Sbjct: 709 TLSKDANEKVA 719
>gi|167031700|ref|YP_001666931.1| hypothetical protein PputGB1_0685 [Pseudomonas putida GB-1]
gi|166858188|gb|ABY96595.1| hypothetical protein PputGB1_0685 [Pseudomonas putida GB-1]
Length = 145
Score = 34.8 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
Query: 42 ADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELF-----ESSTSKA 96
D E+ KA + ++ A+ + EL+ I + H EI LR++ + +
Sbjct: 33 LDASVERHKALLKEHSDALKEMELHHIGHASGISKRHHQEIESLRDILAISDQDRDVALR 92
Query: 97 IAIAVRDSFKCFSDSLECEVI 117
A +D + D L+
Sbjct: 93 AAYRDQDQVRLMQDRLDQVTA 113
>gi|296237133|ref|XP_002763624.1| PREDICTED: hypothetical protein LOC100396544 [Callithrix jacchus]
Length = 2356
Score = 34.8 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 20/112 (17%)
Query: 49 DKAYQEGYN--KAIHDR-----ELYWKSKNDFIQRSHDNEIADLRE----LFESSTSKAI 97
+ YQ KA +R E + K + +QR H E+ LRE L T+ I
Sbjct: 2028 REKYQRDLESLKATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATI 2087
Query: 98 A-------IAVRDSFKCFSDSLECEVIRILKSVLDIGLSRKAAIEFAAVVVD 142
+ + + S ++ + V L R+ E +V +
Sbjct: 2088 SAIEAMKNAHREEMERELEKSQRSQISSVNSDV--EALRRQYLEELQSVQRE 2137
>gi|149194460|ref|ZP_01871557.1| flagellar assembly protein H [Caminibacter mediatlanticus TB-2]
gi|149135635|gb|EDM24114.1| flagellar assembly protein H [Caminibacter mediatlanticus TB-2]
Length = 257
Score = 34.4 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 10/143 (6%)
Query: 12 FSRLGSLSDKIVLSETIISNSTADVTFSSIADFQKEQDKAYQEGYNKAIHDRELYWKSKN 71
S++ LS+ I+ S+ S +A++EGYNK+ + E + K
Sbjct: 70 LSKIEELSNSIITSQLNFEKEIKKCHEESQIKI----KEAFEEGYNKSKEECEKECQKKL 125
Query: 72 DFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRILKSVLDIGLSRK 131
Q + + I L +K + + K +L+ + S+
Sbjct: 126 QQTQEIYQDSIKKL-----EEITKIFNKKIEEIEKELVAVALDIAKEVLQKEVTTD-SKN 179
Query: 132 AAIEFAAVVVDFLKKGDCGKIVI 154
A+ A +++ +K+ I I
Sbjct: 180 IALSLAKSLLNDIKEASKVTIKI 202
>gi|295657623|ref|XP_002789378.1| myosin-2 [Paracoccidioides brasiliensis Pb01]
gi|226283862|gb|EEH39428.1| myosin-2 [Paracoccidioides brasiliensis Pb01]
Length = 2020
Score = 34.4 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 54/148 (36%), Gaps = 9/148 (6%)
Query: 44 FQKEQDKAYQEGYNKAIHDRELY-WKSKNDFIQRSHDNEIADLRELFESSTSKA--IAIA 100
+ + E I +L + + +Q++H +A ++ L E + + A
Sbjct: 1428 LEARTRELQAEANQAGISAAQLTALEEEMAKLQQNHSEALATVKRLQEEEKAARESLKSA 1487
Query: 101 VRDSFKCFSDSLECE-----VIRILKSVLDIGLSRKAAIEFAAVVVDFLKKGDCGKIVIH 155
+ + K + + E + + + + D K ++ V D L+ G + ++
Sbjct: 1488 ISELEKLRQANEDHELDKDSLRQQISELQDELELAKRSVPVNGVNGD-LQNGTGSQPLVS 1546
Query: 156 GPKNLHSLIEECLGEYSSAVCYENADTV 183
G NL S + S+ + D +
Sbjct: 1547 GLINLVSSKKPKPKRRSAGAERIDTDRL 1574
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.303 0.122 0.279
Lambda K H
0.267 0.0371 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,692,520,430
Number of Sequences: 14124377
Number of extensions: 83760955
Number of successful extensions: 387408
Number of sequences better than 10.0: 2180
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 1893
Number of HSP's that attempted gapping in prelim test: 381827
Number of HSP's gapped (non-prelim): 6417
length of query: 216
length of database: 4,842,793,630
effective HSP length: 133
effective length of query: 83
effective length of database: 2,964,251,489
effective search space: 246032873587
effective search space used: 246032873587
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 78 (34.8 bits)