HHsearch alignment for GI: 254780531 and conserved domain: PRK06665
>PRK06665 flgK flagellar hook-associated protein FlgK; Validated.
Probab=96.62 E-value=0.042 Score=30.43 Aligned_cols=77 Identities=9% Similarity=0.098 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998789999999999999999999973062220258999999999999999999999999720688987
Q gi|254780531|r 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448 (452)
Q Consensus 372 ~~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~ 448 (452)
T Consensus 548 ~d~y~~lv~~vG~~~~~a~~~~~~~~~l~~~~~~~r~svSGVnlDEE~anLikfQqaY~AsArvIst~dem~dtLln 624 (628)
T PRK06665 548 DDFFANTASNIGIKGQIAEITKNSQNQILKELTDMRQSVSGVNKDEELANMIEFQQSYNASAKFINVSNELLDTIIN 624 (628)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999987636029999999999999999999999999999999987