HHsearch alignment for GI: 254780531 and conserved domain: PRK07192

>PRK07192 flgL flagellar hook-associated protein FlgL; Reviewed.
Probab=100.00  E-value=0  Score=365.58  Aligned_cols=299  Identities=16%  Similarity=0.198  Sum_probs=226.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             40457999999999999999999999998512236883138999999999999999999999989999999999999999
Q gi|254780531|r    3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS   82 (452)
Q Consensus         3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~   82 (452)
T Consensus         2 RIst~~~~~~~l~~l~~~~~~l~~~q~qlsSGkri~~~sDDp~~~~~~~~l~~~~~~~~q~~~N~~~a~~~l~~~d~aL~   81 (305)
T PRK07192          2 RISTNQLYSTMLRSIQQSQAGLMKLQQQMSTGKRILTPSDDPIASVRLLELNREQANIKQYRSNIANLSNSLSAQEGHLS   81 (305)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             56569999999999999999999999998337853894238999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999999999875303776---303567889999999999986300121100135666543223343322211123333
Q gi|254780531|r   83 KAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG  159 (452)
Q Consensus        83 ~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~~  159 (452)
T Consensus        82 ~~~~il~r~rel~vqa~ngt~s~~dr~aia~Ei~~l~~~l~~~aNt~~~~G~ylF~G~~~~~~pf~~~~~~~~~~y~G~-  160 (305)
T PRK07192         82 GVNDQLQSVRDLLVAAGNGSLSDEDRSAMATELRSMLDSLLGLANAKDSEGRYLFSGTASNTQPITFDPAGGKYTYNGN-  160 (305)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCCEEEEECC-
T ss_conf             9999999999999985068898267998888999989999999874142651353254356664133378870688448-


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             32222222221354333332211111111122333223454433222111122221122222222211111111111101
Q gi|254780531|r  160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF  239 (452)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (452)
T Consensus       161 -------------------------------~~~~~~~i~~~-----------~~~~~~~~-------------------  179 (305)
T PRK07192        161 -------------------------------SDQRQVQVGEG-----------VQLPVNVT-------------------  179 (305)
T ss_pred             -------------------------------CCCEEEEECCC-----------EEEEECCC-------------------
T ss_conf             -------------------------------76447884167-----------04430453-------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             00112221012333344332222233222221000001223444432110012332111000000001111111122344
Q gi|254780531|r  240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD  319 (452)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (452)
T Consensus       180 --g-~~--~-------------f~----~--------------~~~~~-f--------~~-----------l--------  195 (305)
T PRK07192        180 --L-QS--V-------------FE----G--------------GGLDV-L--------NA-----------L--------  195 (305)
T ss_pred             --H-HH--H-------------HC----C--------------CCHHH-H--------HH-----------H--------
T ss_conf             --8-88--7-------------52----5--------------73568-9--------99-----------9--------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             44332232223332222210000012233444321000000578999999999999999999878999999999999999
Q gi|254780531|r  320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM  399 (452)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~  399 (452)
T Consensus       196 ------------------~~~~~~l-~~~~~~~~~~~~~~~~~~~l~~ld~a~~~v~~~~a~iGa~~nrle~~~~~~~~~  256 (305)
T PRK07192        196 ------------------DKLIDDL-KTPTLPAGDPALTAAIDEALGAIDNALDNVLGTLTEVGSRQKELDLLQKNHEDM  256 (305)
T ss_pred             ------------------HHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             ------------------9999874-166655543336999999999999999999999999859999999999889999


Q ss_pred             HHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9999973062220258999999999999999999999999720688987525
Q gi|254780531|r  400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR  451 (452)
Q Consensus       400 ~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~  451 (452)
T Consensus       257 ~~~l~~~~s~i~d~D~a~a~t~l~~~q~~~qAs~~~~a~i~~-----lSL~d  303 (305)
T PRK07192        257 KLQNAKILSDLQDLDYAEAYTDLSNQMAALEATQKTFVKVNS-----LSLFN  303 (305)
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHH
T ss_conf             999999987754557999999999999999999999998816-----73873