HHsearch alignment for GI: 254780531 and conserved domain: PRK08026

>PRK08026 flagellin; Validated.
Probab=100.00  E-value=0  Score=505.98  Aligned_cols=144  Identities=24%  Similarity=0.290  Sum_probs=135.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             74045799999999999999999999999851223688313899999999999999999999998999999999999999
Q gi|254780531|r    2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM   81 (452)
Q Consensus         2 ~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l   81 (452)
T Consensus         3 ~~INtNi~Al~a~~~L~~~~~~l~~sleRLSSGlRIN~A~DDAAGlaIs~rm~sQi~GL~qA~rNa~DgiSliQTAEGAL   82 (566)
T PRK08026          3 QVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGAL   82 (566)
T ss_pred             CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             37966799999999999999999999997510166466321467899999999999889999986988999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             999999999999875303776---30356788999999999998630012110013566654322334
Q gi|254780531|r   82 SKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA  146 (452)
Q Consensus        82 ~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~  146 (452)
T Consensus        83 ~ev~~iLqRmRELAVQAANgTns~~dR~aiQ~Ei~qL~~EIdRIa~~T~FNg~~LL~g~gs-~~~qvG  149 (566)
T PRK08026         83 SEINNNLQRIRELTVQAATGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGS-MKIQVG  149 (566)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC-EEEEEC
T ss_conf             9999999999999998604789999999999999999999998887473898960278885-668850