HHsearch alignment for GI: 254780531 and conserved domain: PRK13589
>PRK13589 flagellin; Provisional.
Probab=100.00 E-value=0 Score=498.99 Aligned_cols=149 Identities=28% Similarity=0.347 Sum_probs=141.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74045799999999999999999999999851223688313899999999999999999999998999999999999999
Q gi|254780531|r 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81 (452)
Q Consensus 2 ~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l 81 (452)
T Consensus 3 l~INtNi~alna~rnL~~~~~~l~~sleRLSSGlRINsA~DDAAGLaISermrsQI~GL~qA~rNAnDgISliQTAEGAL 82 (573)
T PRK13589 3 FRINTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQAINNGNDAIGILQTADKAM 82 (573)
T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 37956899999999999999999999987510065456330467889999999998889999984998999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 999999999999875303776---303567889999999999986300121100135666543223343322
Q gi|254780531|r 82 SKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150 (452)
Q Consensus 82 ~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~ 150 (452)
T Consensus 83 ~Ev~~iLqRmRELAVQAAN~tns~~DR~alQ~Ei~qL~~EIdRIa~tT~FNg~kLLdGs~~~~~~qvGa~~~ 154 (573)
T PRK13589 83 DEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFINQEFQIGASSN 154 (573)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEEECCCCCCCEEEECCCCC
T ss_conf 999999999999999970468998999999999999999996661216489998106887771388426888