HHsearch alignment of GI: 254780531 and MMDB domain: 1ory_B_

>1ory_B (B:) Flagellin; flagellar chaperone, cytosolic export chaperone, FLIS, FLIC; 2.45A {Aquifex aeolicus}
Probab=99.55  E-value=1.5e-15  Score=112.20  Aligned_cols=54  Identities=24%  Similarity=0.341  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             999999973062220258999999999999999999999999720688987525
Q gi|254780531|r  398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR  451 (452)
Q Consensus       398 ~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~  451 (452)
                      +..+|+++++|+|+|+|||+|+++|+|.|||+|++++||+|||+.||.||+|||
T Consensus         2 ~~~~N~~aA~SrI~DaD~A~E~~~~tk~qIL~Qa~~amLaQAN~~pq~vL~LLq   55 (55)
T 1ory_B            2 VAKDNTDNAESIIRNVDFAKEMTEFTKYQIRMQSGVAMLAQANALPQLVLQLLR   55 (55)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHC-
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
T ss_conf             268789999846540559999999999999999999999998526789997519