RPSBLAST alignment for GI: 254780531 and conserved domain: pfam00669

>gnl|CDD|144315 pfam00669, Flagellin_N, Bacterial flagellin N-terminal helical region. Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700. Length = 139

 Score = 89.7 bits (223), Expect = 2e-18
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 3/134 (2%)

Query: 4   ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
           I TN  A++A + L      L+  Q+ +S+GLR+  A D  A  +I+  ++S    LS  
Sbjct: 1   ISTNALALAARRTLNRNQAELQKAQEELSTGLRIDSALDLGAGTAISVSLRSQIRGLSQA 60

Query: 64  SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLR 120
                LG S++  A+  +S+  D++  ++         G       S Q+EI QL S+L 
Sbjct: 61  VRNNNLGISRLQTAQGALSEVTDILQRLRELAVQAANGGNSDIDRASAQAEIQQLTSELN 120

Query: 121 DIARGSSFNGENWL 134
           +IA  +SFNGE   
Sbjct: 121 NIANTTSFNGEYLF 134