RPSBLAST alignment for GI: 254780531 and conserved domain: TIGR02550
>gnl|CDD|162917 TIGR02550, flagell_flgL, flagellar hook-associated protein 3. This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; members of the family vary between 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. Length = 306
Score = 43.5 bits (103), Expect = 1e-04
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Query: 9 SAMSASQKLRDINYN---LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
+ M + L I N L +Q ++SSG R++ +D+ + A + + L
Sbjct: 4 TNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQK 63
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDI 122
I + + + +S DV+ + G D K+I EI QL QL ++
Sbjct: 64 NIDDAKNWLSQTETALSSVGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNL 123
Query: 123 ARGSSFNG 130
A NG
Sbjct: 124 ANTKDGNG 131